BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus
Liberibacter asiaticus str. psy62]
         (373 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done



>gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039815|gb|ACT56611.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62]
          Length = 373

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY
Sbjct: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK
Sbjct: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA
Sbjct: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE
Sbjct: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR
Sbjct: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII
Sbjct: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360

Query: 361 DSLFAIFYFAIGI 373
           DSLFAIFYFAIGI
Sbjct: 361 DSLFAIFYFAIGI 373


>gi|209964745|ref|YP_002297660.1| ABC transporter, permease protein, putative [Rhodospirillum
           centenum SW]
 gi|209958211|gb|ACI98847.1| ABC transporter, permease protein, putative [Rhodospirillum
           centenum SW]
          Length = 384

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 124/371 (33%), Positives = 195/371 (52%), Gaps = 5/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V    G W    +  +   +         + S  +DLS +  +DT GA LI    
Sbjct: 19  EEDQWVLAAGGRWDLSAVPRLDQRL-RTAGPDRPASSVCIDLSGLVALDTAGALLIDRLA 77

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           E+   +     +      L +L+    R    +        Y    +L   +G+  V+  
Sbjct: 78  ERLRAEGHTVAIVGARPDLCALLREVRRASRADSPA--LPRYEPMHDLLERVGRATVEAG 135

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D+      LG+V            +F+      +  +  VG++ +P+V L+SF+ G V+
Sbjct: 136 QDAAKLLGFLGMVTVTALRLVRQPRRFRM--TPFVFHLEQVGLNALPIVGLLSFLIGIVL 193

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL  FGAEIF ++L+ I  LREIG+L+T++++AGRSGSA  A+IG+MK+N+E+D
Sbjct: 194 AYQGADQLRLFGAEIFVVNLLGIGVLREIGILMTSIIVAGRSGSAFTAQIGTMKVNQEVD 253

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+GLD V +L+ PR+ AL+++LPLL   AN  A+ G +++ + Y DI F  F  +  
Sbjct: 254 AMRTLGLDPVELLVLPRLLALMVALPLLGFYANVVALFGGAVMAYSYLDITFGQFLKQLQ 313

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                  +F GL+KAP  A  I +V   EG  V   + S+G+  T  VV SI +VI++D+
Sbjct: 314 LAVNETTLFVGLVKAPVFAIVIALVGCYEGLRVTGSAQSVGQLTTRSVVVSIFLVIVLDA 373

Query: 363 LFAIFYFAIGI 373
           LF+I +  +GI
Sbjct: 374 LFSILFSYLGI 384


>gi|92117460|ref|YP_577189.1| hypothetical protein Nham_1921 [Nitrobacter hamburgensis X14]
 gi|91800354|gb|ABE62729.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14]
          Length = 388

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 135/372 (36%), Positives = 206/372 (55%), Gaps = 4/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S       R  G+W +  +  +         +  ++ S  +D+S ++E+DT+GA L+   
Sbjct: 21  SRGDALELRPDGSWIAANVIALETLADAVAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 80

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +         V    E    LI         N  P ++   N        IG+     
Sbjct: 81  SRRVASADHPVEVVGVSENYAGLIEEVRHVNRHNPPPPKAR--NPVIAKVEEIGRSAWGS 138

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D      +LG +              +  L SL+ Q+Y VG   +P+++LI+F+ GA+
Sbjct: 139 REDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGAI 196

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEI
Sbjct: 197 IAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEI 256

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD V +LI PR+ AL+ +LP+LT + + +A+ G  +V W Y  +  ++F +R 
Sbjct: 257 DALSTMGLDPVVVLILPRVLALVSALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIARL 316

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLGK+ TT VV+SI +VI++D
Sbjct: 317 HDAVSVTHFEVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVLD 376

Query: 362 SLFAIFYFAIGI 373
            LFA+F+ +IG+
Sbjct: 377 GLFAVFFASIGM 388


>gi|83858858|ref|ZP_00952380.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
 gi|83853681|gb|EAP91533.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
          Length = 384

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 5/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +    +    G+W    +      +   I         ++DLS +  IDT GA ++   +
Sbjct: 19  DGARLIVEPKGDWLMEAVGRFDRRLRR-IESETDPKDLVIDLSGLGRIDTAGAYVLGRTL 77

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +       +      +    ++    ++     + +         +    IG+ +   +
Sbjct: 78  SRCREPDADRHFIGEHQTARRMMGEMLQRLADCPEDEIQPR--GVISTLARIGQGVEDGL 135

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            ++       G   +       +  K +    S I  M   GV  +P++ ++SF  GAV+
Sbjct: 136 KETVESFAFFGRTFTTGLSVLVNPTKMR--WTSTIHLMETAGVDALPIISVLSFFIGAVV 193

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L  FGA +F++DL+ I  LRE GV++TA+++AGRS SA  A IGSMK+ +EID
Sbjct: 194 AFMGASLLETFGASVFTVDLVGIAVLREFGVIITAILLAGRSDSAFTAAIGSMKMQQEID 253

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MGLD   +L+ PR+ A ++  PLLT+ A  + + G  +V W   DI    F +R +
Sbjct: 254 AMKVMGLDPYEVLVLPRVIACVVMAPLLTLSAMVAGVFGGMLVSWMTLDISPNFFLTRLN 313

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T  L +   G+ KAP     I IV  + G  VG    SLGK+VTT VVQ+I  VI+ID+
Sbjct: 314 DTIDLKHFLVGMSKAPVFGLVIAIVGCRHGLQVGGDVESLGKRVTTSVVQAIFAVIVIDA 373

Query: 363 LFAIFYFAIGI 373
           LFA+ Y  + I
Sbjct: 374 LFAMMYLELDI 384


>gi|119945392|ref|YP_943072.1| hypothetical protein Ping_1681 [Psychromonas ingrahamii 37]
 gi|119863996|gb|ABM03473.1| hypothetical protein DUF140 [Psychromonas ingrahamii 37]
          Length = 383

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/375 (29%), Positives = 187/375 (49%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60
           + +G  +FR  G+W +  +  +   +         + S   D+S + ++D+ G  L ++ 
Sbjct: 16  NNSGSILFRCQGDWTAKALQNVLRYLEKEAGILF-NMSVQWDVSGVGKVDSAGIMLYIHY 74

Query: 61  --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
              ++  H  ++L G  +  + L+ L+    R  +  Q   +    +       +IGK  
Sbjct: 75  HDLLKLQHCTVELTGARSEYQNLYQLL----RSHVSQQAVSKPGLLSRLLLPFTNIGKST 130

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                D       +G   +            +    S+++ +   GV  +P+V L S + 
Sbjct: 131 ENLWRDINDFLTFIGEHSAALLTSLRHPSSIRY--ASIVKNIEEAGVRALPIVALTSCLI 188

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G VI  Q A QL +FGA IF +D++ I   RE+  L+TA+++AGR+GS+  A++G+M I 
Sbjct: 189 GVVITYQSALQLQKFGANIFIVDMIGISVTRELAPLITAIVVAGRTGSSYTAQLGAMTIT 248

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEI A+RTMG +  R L+ PRI AL+I +PLL + A+   I G  IV   + +I +A F 
Sbjct: 249 EEISAMRTMGFEPHRFLVLPRIIALMIVMPLLILFADVIGIAGGMIVSNIHLNISYAEFI 308

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R      + +++ GL K PF A  I I     GF V  ++ SLG+  T  VV +I +VI
Sbjct: 309 HRLQHVLDIKHLWIGLFKGPFFAWLIAITGCFRGFQVASNTESLGRYTTISVVNAIFLVI 368

Query: 359 IIDSLFAIFYFAIGI 373
             D+LF++ +  +G+
Sbjct: 369 ACDALFSVIFTELGL 383


>gi|152992948|ref|YP_001358669.1| ABC transporter, permease [Sulfurovum sp. NBC37-1]
 gi|151424809|dbj|BAF72312.1| ABC transporter, permease [Sulfurovum sp. NBC37-1]
          Length = 367

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/363 (31%), Positives = 183/363 (50%), Gaps = 18/363 (4%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--IK 70
           G W    + EI  +    +       S + DLS +   D+ G  L M + +K   K  ++
Sbjct: 21  GEWTLATVPEIEKE----LKGIPMGKSVLWDLSGVEAFDSAGVLLFMEYYDKLKQKNAVE 76

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
           L G S   ++++ L+     +K+  +K           +    +GK  +  + D      
Sbjct: 77  LVGYSESQKEMYDLLRKHMIEKVPERK----------TSFFEELGKSTLVVLGDIKDLIT 126

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
            LG +              +     ++  +++ G + + ++ L SF+ G VIA QGA QL
Sbjct: 127 FLGHLFFTLFNVLFHPRNIRI--KEMVYHIHHSGFNALMIIGLTSFLVGMVIAYQGAVQL 184

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           ++FGA+IF +D + I  +RE+G L+TA++IAGRSGSA  AEIG+MKI EEI A+RTMG D
Sbjct: 185 AKFGADIFIVDTVGISMVRELGPLMTAIVIAGRSGSAYTAEIGAMKITEEIAAMRTMGFD 244

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               L+ PRI+ALI++LPLL   ++   I G  +      +I  A F  R +    + + 
Sbjct: 245 PYNFLVMPRIFALIVALPLLIFFSDIMGIFGGMVASQMELNISMAQFVDRLNEVLEVKHY 304

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             G+IK P  A  I  +    GF V  ++ SLG + T  VV SI +VI  D+LF++ Y  
Sbjct: 305 ILGMIKGPVFAFVIAAIGCFRGFQVSDNTESLGLQTTASVVNSIFLVIAFDALFSVIYTE 364

Query: 371 IGI 373
           + +
Sbjct: 365 LNL 367


>gi|292490603|ref|YP_003526042.1| hypothetical protein Nhal_0469 [Nitrosococcus halophilus Nc4]
 gi|291579198|gb|ADE13655.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4]
          Length = 380

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 184/371 (49%), Gaps = 10/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +  R  G W    IS++   + +            VD S IT++DT GA L+   +
Sbjct: 20  DPATSTLRCLGTWTLYGISQLEQTLPL---SQSHPPVHAVDASGITQMDTGGAWLLQRLL 76

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                + +        ++   L+          Q             +   IG+     +
Sbjct: 77  ADLEQQTRPIPCKGLGQEQQKLLRLVQGGSTSQQLTTAPPP-----GILERIGRLSWAHV 131

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            ++ S    +G  +       A   + +      +  +   G++ +P+V L+ F+ G V+
Sbjct: 132 EEALSFLAFIGETLLYFLRSMAHPSRIR--WRPFLSNLQTAGINALPIVGLLIFLVGVVL 189

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  QL  +GA IF ++L+++  +RE+  L+ A++IAGR+GSA  A+IG+M++ EEID
Sbjct: 190 AYQGGIQLRAYGANIFIVELVTLTMVRELAPLMAAIIIAGRTGSAFTAQIGTMQVTEEID 249

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ P+I+AL+++LPLLT+ A+   I G  ++     ++ F  F  R  
Sbjct: 250 ALRTLGIPPMEQLVLPKIFALVLALPLLTVFADMVGIFGGMVMSQALLEVEFREFAQRIP 309

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L++   G+ KAP  A  I  V   +GF VG  + S+G+  TT VVQ+I +VII D+
Sbjct: 310 EVVPLSSFLIGVGKAPVFAVIIATVGCYQGFRVGGGAESVGRHTTTSVVQAIFLVIIADA 369

Query: 363 LFAIFYFAIGI 373
            F+I +  +GI
Sbjct: 370 TFSILFSWLGI 380


>gi|209885947|ref|YP_002289804.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
 gi|209874143|gb|ACI93939.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
          Length = 377

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 142/370 (38%), Positives = 213/370 (57%), Gaps = 5/370 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G      AG+W + ++S +   V  A   +  + +  +D+SA+ EIDTIGA L+   + 
Sbjct: 13  DGRAQMYAAGSWTASQVSALEPAVEAATRTASGARALQLDMSAVNEIDTIGAWLLERMIR 72

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                          E+   LI       +    P      N      Y IG+  V  + 
Sbjct: 73  HARQAGSEIKTVGISERFAGLIEELRSANL---NPPVYEKQNPLLLKLYQIGQSTVSSLQ 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +      +LG + +          + +  L S I Q++ VG   VP+++LI+F+ GA+IA
Sbjct: 130 ELLIFIDMLGRLGTVLARVILHPRRLR--LTSTIYQLHKVGWQAVPIIVLITFLIGAIIA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG F   +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA
Sbjct: 188 QQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + TMGLD + +LI PR+ ALII+LP+LT + + +A+ G  ++ W Y D+  A F +R H 
Sbjct: 248 LTTMGLDPLEVLILPRVIALIIALPILTFIGSIAALYGGGLISWLYGDMMPATFIARLHE 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             ++ +   GLIKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D L
Sbjct: 308 AVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGL 367

Query: 364 FAIFYFAIGI 373
           FA+F+ +IG+
Sbjct: 368 FAVFFASIGM 377


>gi|39937024|ref|NP_949300.1| hypothetical protein RPA3963 [Rhodopseudomonas palustris CGA009]
 gi|192292851|ref|YP_001993456.1| hypothetical protein Rpal_4485 [Rhodopseudomonas palustris TIE-1]
 gi|39650881|emb|CAE29404.1| putative permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
 gi|192286600|gb|ACF02981.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           TIE-1]
          Length = 383

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 130/373 (34%), Positives = 198/373 (53%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         +G+W +     +   V  A        +  +D+S I  +DT GA LI  
Sbjct: 16  IARGEGLALCASGSWTARFAPALERLVTEAEQLGGSKPNVSIDVSGIARLDTFGAWLIER 75

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    +      +P+      S +     +G+ I  
Sbjct: 76  LRRNLGQDGTEARIAGLSTNYASLVDEVRQVSEAGPEPR---RGGSLRAPIERLGRTIYA 132

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           FI+D  +   ++G V++           F+  L S +  +  V    VP+++LI+F+ G 
Sbjct: 133 FIDDIVALISMMGAVLAGVLRVVVRPTSFR--LTSTVHHLEQVCWRAVPIIVLITFLIGC 190

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA++F +D++ +L LREIGVLL ++M+AGRSGSA  AE+GSMK+ EE
Sbjct: 191 IIAQQGIFHFRKFGADVFVVDMLGVLVLREIGVLLVSIMVAGRSGSAYTAELGSMKMREE 250

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +LI PR+ AL++++P+LT L   SA+ G  +V W Y  +    F  R
Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMSALYGGGLVAWMYGGVDPEAFLLR 310

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IGIVA  EG AV   + SLG   T  VV+SI  VI++
Sbjct: 311 LRDAISIDHFTVGMIKAPVMAVVIGIVACVEGLAVQGSAESLGSHTTASVVKSIFFVIVM 370

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+  IGI
Sbjct: 371 DGVFAIFFAGIGI 383


>gi|115523755|ref|YP_780666.1| hypothetical protein RPE_1737 [Rhodopseudomonas palustris BisA53]
 gi|115517702|gb|ABJ05686.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisA53]
          Length = 382

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 200/371 (53%), Gaps = 4/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G+   R  G+W +     +         +        +DL+ + EIDT+GA L+    
Sbjct: 16  DAGVLQLRPGGSWTAGNAVVLERLFEEVSPQLQGVRGLRIDLAGVQEIDTLGAWLLEKMS 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +   +     +    E+   LI    +       P      N        +G+      
Sbjct: 76  RRAAQQGVSSELVGVDERHAGLIDEVRQVNRNAPAPH--PRGNFVLGWLDQLGRLTWASR 133

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            +      +LG +              +  L SL  Q+Y VG   +P+++LI+F+ GA+I
Sbjct: 134 VEVLVFLQMLGALAVALLGVLRRPRSLR--LTSLFYQVYRVGWQAIPIMLLITFLIGAII 191

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEID
Sbjct: 192 AQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEID 251

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TM LD V +LI PR+ ALII+LP+L+ L + +A+ G  +V W Y  +   +F +R H
Sbjct: 252 ALSTMDLDPVEVLILPRVLALIIALPILSFLGSMAALYGGGLVAWFYGGMSPTIFIARLH 311

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   G+IKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI  VI++D 
Sbjct: 312 EAVSVTHFEVGIIKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFCVIVLDG 371

Query: 363 LFAIFYFAIGI 373
           LFA+F+ +IG+
Sbjct: 372 LFAVFFASIGM 382


>gi|209884491|ref|YP_002288348.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
 gi|209872687|gb|ACI92483.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5]
          Length = 378

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 198/371 (53%), Gaps = 6/371 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                 R AG W       +   V         ++ + ++D+S ++ +DT GA LI    
Sbjct: 13  GAGVALRAAGEWTVHHAPALEKLVEHTERAGKSRNAALVIDVSQVSRLDTFGAWLIERLR 72

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                      ++       SL+    R K    +P+ +F           +G+ +V+  
Sbjct: 73  RAQIRGDVAPPIAGLSADYASLVEEVKRVKAPPVQPRPAF---GPIRAVEAVGRSVVEVG 129

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               S  +++G V+            F+    S I  +  V    VP+V+LI+F+ G +I
Sbjct: 130 QTLLSLLNMMGSVLHALWRVILHPSHFR--FTSTIHHLEQVCWRAVPIVLLITFLIGCII 187

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG FQ  +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSM++ EE+D
Sbjct: 188 AQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVD 247

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RTMG D   +LI PRI ALII++P+L  L   +A+ G  +  W Y  +    F +R  
Sbjct: 248 ALRTMGFDPTEVLILPRILALIIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLARLR 307

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   GL+KAPFMA  IGI+A  EG AV   + SLG+  T  VV+SI  VI++D 
Sbjct: 308 EAISINHFTVGLVKAPFMALIIGIIACVEGAAVRGSAESLGQHTTASVVKSIFFVIVVDG 367

Query: 363 LFAIFYFAIGI 373
           +FAIF+ +IG+
Sbjct: 368 IFAIFFASIGV 378


>gi|154248034|ref|YP_001418992.1| hypothetical protein Xaut_4113 [Xanthobacter autotrophicus Py2]
 gi|154162119|gb|ABS69335.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2]
          Length = 474

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 133/372 (35%), Positives = 199/372 (53%), Gaps = 7/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S++        G W S    E+   V              +DLSA+  +DT GA L    
Sbjct: 110 SQDDRLTVAGRGAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERL 169

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              + G      V     +   LI    R   +   P         + +    G + V  
Sbjct: 170 KRSWKGTGVEPQVKGLAPRYKVLIEEMGRMGQEQPPPA-----RRHEAILERFGHETVNV 224

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+ +  + +G  ++  G        F+    +++ QM  VG+  VP+++LI+F+ G +
Sbjct: 225 AADAAALLNFVGASVAAMGRVLLRPRSFR--FTAMVNQMDRVGLRAVPIIVLITFLIGCI 282

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +AQQG F   +FGA+I+ +D++ +L LRE+GVL+ A+MIAGRSGSA  AE+GSM++ EEI
Sbjct: 283 LAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEI 342

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG D V +L+ PR+ ALII+LPLLT + + S+++GA +V W Y  I   VF  R 
Sbjct: 343 DALRVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRL 402

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +     G+IKAPFMA  IGIVA  EG  VG  + SLG   T  VV++I +VI++D
Sbjct: 403 KGAIDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMD 462

Query: 362 SLFAIFYFAIGI 373
            +FA+F+ AI +
Sbjct: 463 GVFAMFFAAIDM 474


>gi|288962789|ref|YP_003453083.1| ABC transport system permease protein [Azospirillum sp. B510]
 gi|288915055|dbj|BAI76539.1| ABC transport system permease protein [Azospirillum sp. B510]
          Length = 401

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 119/372 (31%), Positives = 196/372 (52%), Gaps = 5/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E+G      AG W   E++  A D +          +  +DLS +  +DT+GA L+   
Sbjct: 35  AEDG-WRIAAAGRWTL-EVAAAASDALDHAAPPRDGAALRLDLSGVEALDTVGAYLLSRQ 92

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +   V     +  +L             P     ++   ++    G+  V  
Sbjct: 93  ADRMAADGRAVEVVGVRPEHAALFDAVRDAGKAPPHPIE-REHHPIHDMVVRTGETTVHA 151

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +       LGLV            + +  L S++  +   G++ +P++ L+SF+ G V
Sbjct: 152 AREVLDLVGFLGLVTVTFVRLILRPSRLR--LTSVLFHIEQTGLNALPILGLLSFLIGVV 209

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A QGA QL +FGAE++ ++L+ I  LREIG+L+TA+++AGRSGSA  A+IG+MK+N+E+
Sbjct: 210 LAFQGADQLKRFGAELYVVNLLGISVLREIGILMTAIIVAGRSGSAFTAQIGTMKVNQEV 269

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DAI TMGLD V +L+ PR  AL+I+LPLL   A+   + G +++ +   DI F  F  + 
Sbjct: 270 DAIGTMGLDPVELLVVPRALALVITLPLLAFYADVMGLFGGAVMAYATLDITFGQFIRQL 329

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           HS   +  +  GLIKAP  A  I +V   EG  V   + S+G   T  VV+ I +VI+ID
Sbjct: 330 HSAIGINTVLAGLIKAPVFALVIAMVGCYEGLKVSGSAESVGIMTTKAVVEGIFLVIVID 389

Query: 362 SLFAIFYFAIGI 373
           ++F++ +  +G+
Sbjct: 390 AVFSVLFSLLGV 401


>gi|85716130|ref|ZP_01047106.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A]
 gi|85697129|gb|EAQ35011.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A]
          Length = 370

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 136/373 (36%), Positives = 214/373 (57%), Gaps = 8/373 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S       R  G W +  ++ +      A  +  ++ S  +D+S ++E+DT+GA L+   
Sbjct: 5   SRGDALELRPDGFWIAANVTVLEALADAAAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 64

Query: 62  MEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             +  G   ++ GVS +   L   +   +R  +   K +     N        +G+    
Sbjct: 65  SRQIAGHPAEIVGVSENYAGLIEEVRHVNRHNLPPPKAR-----NPVIAKVEEVGRAAWN 119

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D      +LG +              +  L SL+ Q+Y VG   +P+++LI+F+ GA
Sbjct: 120 SREDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGA 177

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 178 IIAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 237

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGLD V +LI PR+ AL+++LP+LT + + +A+ G  +V W Y  +  ++F +R
Sbjct: 238 IDALSTMGLDPVVVLILPRVLALVLALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIAR 297

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLGK+ TT VV+SI +VI++
Sbjct: 298 LHDAVSVTHFQVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVL 357

Query: 361 DSLFAIFYFAIGI 373
           D LFA+F+ +IG+
Sbjct: 358 DGLFAVFFASIGM 370


>gi|316935525|ref|YP_004110507.1| hypothetical protein Rpdx1_4222 [Rhodopseudomonas palustris DX-1]
 gi|315603239|gb|ADU45774.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           DX-1]
          Length = 383

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 126/373 (33%), Positives = 198/373 (53%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         +G+W +     +   V  A           +D+S I  +DT GA LI  
Sbjct: 16  IARAEGLALCASGSWTARFAPVLERLVTEAEQLGGSKPDVFIDVSGIARLDTFGAWLIER 75

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    +       P+      + +     +G+ +  
Sbjct: 76  LRRNLGQAGAEARIAGLSANYASLVDEVRQVSETGPAPK---RGGALRAPIERLGRTMYA 132

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F +D  +   ++G V++  G        F+  L S +  +  V  + VP+++LI+F+ G 
Sbjct: 133 FFDDIVALISMMGAVLAGLGRIVIRPTSFR--LTSTVHHLEQVCWNAVPIILLITFLIGC 190

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++AQQG F   +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 191 IVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREE 250

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F  R
Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMAALYGGGLVAWLYGGVDPEAFLLR 310

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+SI  VI++
Sbjct: 311 LRDAISIDHFTVGMIKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTASVVKSIFFVIVM 370

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+  IGI
Sbjct: 371 DGVFAIFFAGIGI 383


>gi|299131823|ref|ZP_07025018.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
 gi|298591960|gb|EFI52160.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
          Length = 383

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 132/371 (35%), Positives = 195/371 (52%), Gaps = 6/371 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM 62
                 R  G W       +   V         S +  ++D+S I+ +DT GA LI    
Sbjct: 18  GAGVALRAGGEWTVHHAPALEKLVERTERSRDGSRASLVIDVSQISRLDTFGAWLIERLR 77

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                      ++       SL+    R K   +  +  F           +G+ +V   
Sbjct: 78  RALTRGDTAPMIAGLSADYASLVEEVKRVKAVPEPAKVPF---GPVRAVEAVGRTVVGVA 134

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +      ++ G ++S           F+  L S + Q+  V    VP+V+LI+F+ G +I
Sbjct: 135 DTLLGLLNMTGSILSAFWRVILHPSHFR--LTSTVHQLEQVCWRAVPIVVLITFLIGCII 192

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG FQ  +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSM++ EE+D
Sbjct: 193 AQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVD 252

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RTMG D   +LI PRI AL+I++P+L  L   +A+ G  +  W Y  +    F SR  
Sbjct: 253 ALRTMGFDPTEVLILPRILALVIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLSRLR 312

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   GL+KAPFMA  IGI+A  EG AV   + SLGK  T  VV+SI  VI++D 
Sbjct: 313 EAISINHFTVGLVKAPFMALIIGIIACVEGAAVQGSAESLGKHTTASVVKSIFFVIVVDG 372

Query: 363 LFAIFYFAIGI 373
           LFAIF+ +IG+
Sbjct: 373 LFAIFFASIGV 383


>gi|226942634|ref|YP_002797707.1| ABC transporter protein [Azotobacter vinelandii DJ]
 gi|226717561|gb|ACO76732.1| ABC transporter protein [Azotobacter vinelandii DJ]
          Length = 382

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +  ++  A  +   +   ++D   +  +DT GA L++  +      
Sbjct: 22  LNVVGDWTLQHYPRLKREIERARPRLDDACPVVLD--GLGALDTAGAGLLVELLGARRLT 79

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +       +  +L+             +     ++ K+   HIG+ +        + 
Sbjct: 80  DIARWAPQLPAERQALLRTVAMAVAGAAGTEEEPERSTLKDELAHIGRVVETLWEQQRTL 139

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +S          +++     L+  +   G+  VP+V L++F+ GAV+A  GA 
Sbjct: 140 YGFIGLTLSTLLATLPRPRRWRI--TPLVAHIERTGLDAVPIVALLTFMVGAVVAFLGAT 197

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L QFGA I++++L++   LRE GVLL A+++AGR+ SA  A+IG+MK NEEIDAIR +G
Sbjct: 198 VLGQFGATIYTVNLVAYSFLREFGVLLCAILMAGRTASAFAAQIGAMKANEEIDAIRALG 257

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ A++++LP+LT +A    I+G   V     DI    +F+       + 
Sbjct: 258 LDPIELLVLPRVLAMLLTLPILTFIAMLCGILGGLAVCVLALDISPVQYFAILEQEIPVN 317

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  I ++   EGF     + S+G++ T+ VVQSI +VI+ID+L A+F 
Sbjct: 318 HYLVGLGKAPLFAFLIAVIGCLEGFKASGSAQSVGERTTSSVVQSIFMVILIDALAALFL 377

Query: 369 FAIG 372
             +G
Sbjct: 378 MEMG 381


>gi|260430754|ref|ZP_05784726.1| ABC transporter, inner membrane subunit [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418195|gb|EEX11453.1| ABC transporter, inner membrane subunit [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 374

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 119/370 (32%), Positives = 192/370 (51%), Gaps = 7/370 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           N       +G   +  +  +             +   + DLS +  +DT GA LI     
Sbjct: 12  NDALRIAVSGEMVTQSLESVEKGFRAL---HPDAKRIVFDLSGLGSLDTGGAWLICDLAR 68

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +                  +L+    +        +       F      +G++ V    
Sbjct: 69  RASAAGATVTYENVTATQSALLETVAQNIAAEIPAEAPPR--GFVPWLESLGRRTVGAGR 126

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D+ S    LGL +          ++ +    +L+ QM   G+  +P+V L+ F+ G V+A
Sbjct: 127 DTASMLSFLGLTLHRLARTLVMPWRLRR--AALVSQMEETGLKALPIVALMGFLIGVVLA 184

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QGA QL QFGAEIF ++L+SI  LRE+GVLLTA+++AGRSGSA  A IGSMK+ EEIDA
Sbjct: 185 FQGATQLKQFGAEIFVVELISISVLRELGVLLTAIIVAGRSGSAFTASIGSMKVQEEIDA 244

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++T+GLD + +L+ PR+ AL+I LP+L  +A+ + + G +++ W    +   +F +R   
Sbjct: 245 MQTLGLDPIEVLVVPRVLALLIMLPILGFVADMAGLFGGALMSWIDLGVSPGMFVTRLKE 304

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + ++  GLIKAPF A  I ++A  +   V   S S+G++ T+ VVQ+I +VI ID+L
Sbjct: 305 NTDVWHLAVGLIKAPFFAVVIAVIACWQAMQVKGSSQSVGQRTTSSVVQAIFMVIAIDAL 364

Query: 364 FAIFYFAIGI 373
           F+IF+  +G+
Sbjct: 365 FSIFFSEVGV 374


>gi|85373087|ref|YP_457149.1| ABC-type transport system permease component [Erythrobacter
           litoralis HTCC2594]
 gi|84786170|gb|ABC62352.1| ABC-type transport system permease component [Erythrobacter
           litoralis HTCC2594]
          Length = 370

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 121/370 (32%), Positives = 201/370 (54%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G TV R AG +    I  I  D+        +   + VDL  +++IDT+GA +     
Sbjct: 13  DDGTTVLRLAGPYLVSTIGPIDQDLRAL-----EGGFSAVDLGDVSQIDTVGAWMACTVA 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +  +I+    S    +L   +  +  K     +         F+ +    G+++V+F 
Sbjct: 68  GAHDAEIR--NASDRASRLIDAVQGSINKAETTPE-----RDPLFRRVAMMTGERVVEFG 120

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ++        G +++  G       +F     +L RQ+  VG++ +P++ L+SF+ G VI
Sbjct: 121 HNLLDLLSFAGAIVAGFGRLLLHPGRFPH--KALFRQLELVGINALPIIGLMSFLIGIVI 178

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGA QL QFGAE  +++L+  + +RE+GVL+TA+M+AGRSGSA  A+IG+MK+ EE+D
Sbjct: 179 AQQGAVQLEQFGAETLTVNLVGRITMRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEVD 238

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  V  L+ PRI A ++ +PLL   +   AI+G ++V      IPF  F  R  
Sbjct: 239 AMRTIGISPVEALVLPRILAAVLMMPLLGFYSACVAIVGGAVVSEFALGIPFWNFLERIQ 298

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +++ GLIKAP     + +    +G  V  +S  +G + T  VVQ+I +VI++D+
Sbjct: 299 DVVPTYDLWVGLIKAPVFGLIVALAGCYQGMQVRGNSEEVGSRTTKAVVQAIFMVIVLDA 358

Query: 363 LFAIFYFAIG 372
            FA+F+  IG
Sbjct: 359 FFAVFFTEIG 368


>gi|92116871|ref|YP_576600.1| hypothetical protein Nham_1315 [Nitrobacter hamburgensis X14]
 gi|91799765|gb|ABE62140.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14]
          Length = 377

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 200/373 (53%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++        AG W +     +   V  A   +    +  +D+S I+ +DT GA LI  
Sbjct: 10  IAQGDGLALCAAGPWTARFAPALERIVADAEKLAGSRPNIFIDVSQISRLDTFGAWLIER 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    R    +  P       +   L   +G+ +V 
Sbjct: 70  LRRSLTQGGVEAKIAGLSLNYSSLVDEVRRVPAADPAPA---RQRALTGLIEDVGRNVVG 126

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F         +LG V++ +G        F+  L S +  +  V    VP+V+LI+F+ G 
Sbjct: 127 FGTTLTGLIGMLGAVLAASGRVMRHPRSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGC 184

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +I+QQG F   +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 185 IISQQGIFHFRKFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREE 244

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +L+ PR+ AL+I+LP+L  L   +A+ G  +V W Y  +    F  R
Sbjct: 245 IDALRTMGFDPIEVLVLPRMLALVIALPILAFLGAIAALYGGGLVAWLYGGVQPEAFLIR 304

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IGIVA  EG AV   + SLG++ T+ VV+ I  VI++
Sbjct: 305 LRDAISIDHFVVGMIKAPVMAAVIGIVACVEGLAVEGSAESLGQRTTSSVVKGIFFVIVM 364

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+ +IG+
Sbjct: 365 DGVFAIFFASIGM 377


>gi|182680563|ref|YP_001834709.1| hypothetical protein Bind_3668 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636446|gb|ACB97220.1| protein of unknown function DUF140 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 377

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 143/368 (38%), Positives = 209/368 (56%), Gaps = 5/368 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
                F  AG+W       +       +    ++  A+ +L+ +  +DT GA LI     
Sbjct: 13  GDAMHFSLAGHWTLEWSKGLESAAADLLKALGKARKAVFNLAGVERLDTAGAWLIDRTRR 72

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
               +     +     +   L    H +     K Q + F   F       GK +V+   
Sbjct: 73  NLSERGVSTELDHVRPEYGILFQEAHFRTFPEPKRQNASF---FVAPLVETGKTVVEAGR 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           ++      LG  I++  +       F+G   SL+ Q+  +G+  VP++ LI+F+ G ++A
Sbjct: 130 ETLRGMSFLGEAIASLAQSFVQRQHFRGI--SLVYQIETIGLRSVPIITLINFLVGCIVA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG FQL +FGA  F++DL+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA
Sbjct: 188 QQGLFQLRRFGASTFAVDLLGILTLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MGL  + +LI PR+ AL+ISLPLLT +A+ +A+ G  +V + Y  I    F +R H 
Sbjct: 248 LTVMGLRPIEVLIVPRLLALVISLPLLTFIADMAALAGGLLVSYSYGGIQPVAFLNRLHD 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +L   +TGLIKAPFMA  IG++A  EGFAV   + SLG++VTT VV+SI +VI++D L
Sbjct: 308 AISLHTFYTGLIKAPFMALVIGLIAAVEGFAVEGSAESLGRQVTTSVVKSIFMVIVLDGL 367

Query: 364 FAIFYFAI 371
           FA+F+  I
Sbjct: 368 FAMFFAGI 375


>gi|238784662|ref|ZP_04628667.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970]
 gi|238714434|gb|EEQ06441.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970]
          Length = 381

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +  +V         +   + DLS +  +DT GA L++  + +   K
Sbjct: 21  VAAKGDWVLAHYRALEPEVTQLRANLPAA--VVFDLSQLGALDTAGATLLVLLLGEERVK 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +   T  ++   L+               +     +  L  +IG+ +     D  S 
Sbjct: 79  QLRKLAPTLPDERRVLLETVSHVLPDLTPEPATKAPPFWLELLSNIGRSMDNLWQDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFVGLTLEALLSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPVFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|58580429|ref|YP_199445.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425023|gb|AAW74060.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 398

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 43  DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 97

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 98  IGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRIGQD 151

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 152 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 209

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 210 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 269

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 270 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 329

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 330 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 389

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 390 ALWFMKMG 397


>gi|78049251|ref|YP_365426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037681|emb|CAJ25426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 409

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 118/368 (32%), Positives = 190/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R  G+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 54  DQAQVRLVGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGR 108

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 109 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 162

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 163 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 220

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 221 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 280

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 281 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 340

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 341 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 400

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 401 ALWFMKMG 408


>gi|114798707|ref|YP_761599.1| hypothetical protein HNE_2921 [Hyphomonas neptunium ATCC 15444]
 gi|114738881|gb|ABI77006.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 375

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 108/371 (29%), Positives = 187/371 (50%), Gaps = 9/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +   V R  G+W    I    + +   +    QS    +D+S +  +DT GA LI    
Sbjct: 14  SDEGNVLRLGGDWTVATI----NQLDAQLRAVSQSVPICLDVSGLGRLDTSGAYLIDRTW 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +         +        SL+   H        P ++        +    GK  V F 
Sbjct: 70  RENGAAW-PPRIVGDHASAASLLEQVHAHAEPVPPPAKAD--AGLLAMLERTGKGSVDFY 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            ++ +    LG  +          +K +    S++  M   G++ +P++  +SF  G V+
Sbjct: 127 KETTASLAFLGETLVTIVRLLVQPWKLR--WTSIVAVMEEAGLNAMPIIAFLSFFVGMVV 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L  F  EI++I+L+    LRE GV+LT +++AGR+ S+  A+IG+MK+ +E+D
Sbjct: 185 AFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMRQEVD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++T+GL  + +L++PR+ A+++  P+LT +A  + + G + V W   DI  AVF  R  
Sbjct: 245 AMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERMR 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ++  +   + G+ K+P     + ++A ++G  VG    SLGK  TT VVQ+I  +I+ID+
Sbjct: 305 NSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVIDA 364

Query: 363 LFAIFYFAIGI 373
           +FAIFY  +G+
Sbjct: 365 IFAIFYMELGL 375


>gi|86748751|ref|YP_485247.1| hypothetical protein RPB_1627 [Rhodopseudomonas palustris HaA2]
 gi|86571779|gb|ABD06336.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris
           HaA2]
          Length = 383

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 128/373 (34%), Positives = 198/373 (53%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         AG+W +     +   V  A   +    +  +D+S +  +DT GA LI  
Sbjct: 16  IARGDGLALCAAGSWTAKFAPVLERIVADAEQLTGTRPNIFIDVSEVVRLDTFGAWLIER 75

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    + +     P  +      +     +G+ +  
Sbjct: 76  LRRNLAQDGIEAKIAGLSANYASLVDEVRQVE---PVPADTSRGGGLRAPIEKLGRTMFA 132

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F +D  +   +LG V++           F+  L S +  +  V    VP+V+LI+F+ G 
Sbjct: 133 FGDDIVALISMLGAVLAGVLRAILHPSTFR--LASTVHHLEQVCWRAVPIVVLITFLIGC 190

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 191 IIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREE 250

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F  R
Sbjct: 251 IDALRTMGFDPIDVLIVPRLLALLLAMPILTFLGAMAALYGGGLVAWLYGGVDPEAFLLR 310

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  VI++
Sbjct: 311 LRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVRGSAESLGQHTTASVVKGIFFVIVM 370

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+ +IGI
Sbjct: 371 DGVFAIFFASIGI 383


>gi|154252954|ref|YP_001413778.1| hypothetical protein Plav_2512 [Parvibaculum lavamentivorans DS-1]
 gi|154156904|gb|ABS64121.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans
           DS-1]
          Length = 387

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 125/372 (33%), Positives = 199/372 (53%), Gaps = 5/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++  +     AG+W    +  +   +  AI     +  AI+    IT  DT  A ++   
Sbjct: 21  ADGNVLRIEAAGDWSIVHLDPVDRQL-RAIGARPGTGRAIIGFKDITRFDTAAAAILGRT 79

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                 +          +    L+           +P    +      +   IG  +   
Sbjct: 80  AAHLGEQGIKVDFEDVSDAQRLLLDKID--SCGMPEPAHVPWRPLHIQIIDKIGATMRDI 137

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +  +    +G V++  G   A   + +      +  M   G   +P+V L++F+ GAV
Sbjct: 138 GAEGLAMLGFVGAVMATAGRTIARPSRLR--WTPFVHHMEKAGFDALPLVCLLTFLIGAV 195

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +AQQGA QL QFGAE+F+++L++I+ LRE+G+LLTA+++AGRSGSA  AEIGSMK+ EEI
Sbjct: 196 VAQQGAVQLRQFGAEVFTVNLIAIIFLREVGLLLTAIIVAGRSGSAFTAEIGSMKMREEI 255

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+GLD + +L+ PR+ AL+++LPLLT +A+   +IG  +V+    D+P  V+ SR 
Sbjct: 256 DAMRTLGLDPMEMLVLPRVLALMVTLPLLTFVADIMGLIGGGLVVQVMLDMPPGVYISRV 315

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                      GL+KAPFMA  I +V  + G +V   + S+G   T  VV+SI +VII+D
Sbjct: 316 QEAVGFWTFGVGLVKAPFMAVVIALVGCRSGLSVTGSAESVGAMTTRSVVRSIFLVIILD 375

Query: 362 SLFAIFYFAIGI 373
           +LFA+F+ A+GI
Sbjct: 376 ALFAMFFTAVGI 387


>gi|229587675|ref|YP_002869794.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359541|emb|CAY46382.1| putative ABC transport system, permease [Pseudomonas fluorescens
           SBW25]
          Length = 382

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 194/365 (53%), Gaps = 5/365 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +         +      A +DL+ +  +DT GA L++  +     +
Sbjct: 21  LRITGDWTLAHYASLKKLSDKLDGQYDAG--ARIDLNGLGALDTAGASLLVELLGPTRIE 78

Query: 69  IKLQGVS-THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              +    +      +L+   +R       P+++    +   +   IG+ +     DS  
Sbjct: 79  QSAEQTDCSLSAADRALLKTVYRSLNDFCVPEKAPEEAAGIQVLARIGRAVDTVWQDSKQ 138

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +GL++           +++  L  ++  +  VG+   P+V L++F+ GAV+A  GA
Sbjct: 139 LLGFIGLILETFARGIFRPRRWR--LTPMVAHLEQVGLDAAPIVALLTFLVGAVVAFLGA 196

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGA IF++DL++   LRE GVLLTA++IAGR+ SA  A+IGSMK NEEIDAIRT+
Sbjct: 197 TVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIRTL 256

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + +L+ PR+ AL+++LP+LT LA  S I+G  +V     DI  A+F S   S   +
Sbjct: 257 GLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDIGV 316

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F
Sbjct: 317 QHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALF 376

Query: 368 YFAIG 372
           +  +G
Sbjct: 377 FMEMG 381


>gi|86357964|ref|YP_469856.1| ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282066|gb|ABC91129.1| probable ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 389

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 149/371 (40%), Positives = 225/371 (60%), Gaps = 5/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+      R +GNW+S  +  +  +      +  ++ +  +DLS +++IDT G  L+   
Sbjct: 23  SDGSGQHVRLSGNWRSAYVHLVLHEFEKL--QREKTGNLTLDLSDVSDIDTAGIWLLCRL 80

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +          +  ++     +  K  +P++    +    +   +GK     
Sbjct: 81  KKQEEAAGRTVRFVGTNPHIDEMLEMFSEEPAK-PEPEQKEKVSLAARILAPLGKMTYDI 139

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 140 WDNLAASMYILGSAVRGAQMKLGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 197

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI
Sbjct: 198 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 257

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F +R 
Sbjct: 258 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARL 317

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D
Sbjct: 318 HEAITLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMD 377

Query: 362 SLFAIFYFAIG 372
            LFA+FY AI 
Sbjct: 378 GLFAMFYAAID 388


>gi|90425518|ref|YP_533888.1| hypothetical protein RPC_4043 [Rhodopseudomonas palustris BisB18]
 gi|90107532|gb|ABD89569.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB18]
          Length = 378

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 133/373 (35%), Positives = 206/373 (55%), Gaps = 4/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +S     + R  G+W +   + +     +   +  Q+ +  +DL+ + EIDT+GA L+  
Sbjct: 10  ISTGDGLLLRPTGSWTAVHAAALEHLFDVVAPQLRQAKALTIDLAELHEIDTLGAWLLEK 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +         V    E+   LI    +  +  ++P  +   +        IG+    
Sbjct: 70  ISRRAAQAGHPASVVGAAERYAGLIDQVRQ--VNRRQPANAVRGSLILTRLEDIGRATWG 127

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D  +   + G + +            +  L SL+ Q+Y VG   +P++ LI+F+ GA
Sbjct: 128 AREDLFAFLQMTGALANALLGVLRRPRSLR--LTSLVYQIYRVGWQAIPIIGLITFLIGA 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 186 IIAQQGIFHFRKFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM LD V +LI PR+ ALII+LP+L  L   +A+ G  +V W Y  +   +F +R
Sbjct: 246 IDALSTMDLDPVEVLILPRVIALIIALPILAFLGAMAALYGGGLVAWFYGGMSPTIFIAR 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   ++ +   G+IKAPFMA  IGIVA  EG  V   + SLG++ T  VV+SI  VI++
Sbjct: 306 LHEAVSITHFEVGIIKAPFMALVIGIVACSEGLRVMGSAESLGRQTTASVVKSIFCVIVL 365

Query: 361 DSLFAIFYFAIGI 373
           D LFA+F+ +IG+
Sbjct: 366 DGLFAVFFASIGM 378


>gi|254512708|ref|ZP_05124774.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium
           KLH11]
 gi|221532707|gb|EEE35702.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium
           KLH11]
          Length = 374

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 126/368 (34%), Positives = 197/368 (53%), Gaps = 7/368 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G+ ++ E+ ++  D            + ++D+S +  +DT GA LI   + + 
Sbjct: 14  GVHIRITGDLRTQELDDVEADFGKL---RPSGQNVVLDMSQLQSLDTGGAWLIADLVRRL 70

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                            SLI    +     Q                 IG++      D+
Sbjct: 71  GSDSSQVQFEGAKPAHASLIETVSKNIP--QAVGDQAPARGVVVWVSRIGERTFGAWEDT 128

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S    LGL +          ++ +    +L+ QM  VG   +P+V L+ F+ G V+A Q
Sbjct: 129 LSIMGFLGLTLHRLVRTLIMPWRLRR--AALVSQMEQVGFKALPIVALMGFLIGVVLAFQ 186

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA QL QFGAEIF ++L+SI  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EEIDA+R
Sbjct: 187 GATQLKQFGAEIFVVELISISILRELGILLTAIIVAGRSGSAFTASIGSMKVQEEIDAMR 246

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD + +L+ PR+ AL+I LP+L  +A+ + +IG +++ W    +   +F +R     
Sbjct: 247 TLGLDPIEVLVIPRVLALLIMLPILGFIADMAGLIGGALMSWIDLGVSPGMFLTRLKENT 306

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +A +  G+IKAPF A  IG++A  +   V   S S+G++ T  VVQSI +VI ID+LF+
Sbjct: 307 GVAQLAVGMIKAPFFALVIGVIACWQAMQVKGSSESVGQRTTASVVQSIFMVIAIDALFS 366

Query: 366 IFYFAIGI 373
           IF+  +G+
Sbjct: 367 IFFSELGV 374


>gi|115523490|ref|YP_780401.1| hypothetical protein RPE_1471 [Rhodopseudomonas palustris BisA53]
 gi|115517437|gb|ABJ05421.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisA53]
          Length = 377

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 126/373 (33%), Positives = 197/373 (52%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++        AG W +P    +   VV A   S      ++D+S ++ +DT GA LI  
Sbjct: 10  IAKGNALALCAAGPWTAPYAPALERIVVEAEALSSDGAKVLIDVSDVSRLDTFGAWLIER 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    R +  +            +     IG+ +V 
Sbjct: 70  LRRSLAQGGIEAQIAGLSANYSSLVDEVRRVEADDAPRSTKMR---LRAPLEEIGRNVVG 126

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F +   S   + G V ++          F+  L S +  +  V    VP+V+LI+F+ G 
Sbjct: 127 FGDTMVSLVAMSGAVTASVFRLIRHPLSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGC 184

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++AQQG F   +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 185 IVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREE 244

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +L+ PR+ AL++++P+LT L   +A+ G  +V W Y  +    F  R
Sbjct: 245 IDALRTMGFDPIDVLVMPRLIALVLAVPILTFLGVVAALYGGGLVAWVYGGVEPDAFLLR 304

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IG+VA  EG AV   + SLG+  T  VV+ I  VI++
Sbjct: 305 LREAISIDHFTVGMIKAPVMALVIGVVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVM 364

Query: 361 DSLFAIFYFAIGI 373
           D +FAI +  IG+
Sbjct: 365 DGVFAIMFATIGM 377


>gi|299132338|ref|ZP_07025533.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
 gi|298592475|gb|EFI52675.1| protein of unknown function DUF140 [Afipia sp. 1NLS2]
          Length = 377

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 139/370 (37%), Positives = 215/370 (58%), Gaps = 5/370 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G      AG+W + ++S +   V  AI+    +    +D+SA+ +IDTIGA L+   + 
Sbjct: 13  DGSAQLYAAGSWTASQVSSLEPVVNAAIHNVSGARVLQLDMSAVDQIDTIGAWLLERMIR 72

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           + H            E+   LI       +    P      N+     Y IG+  V  + 
Sbjct: 73  RVHQAGSEIRTVGIHERFAGLIDELRSVNLH---PPVHERQNAVLLKLYQIGQSTVASLQ 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +      +LG + S          + +  L S I Q++ VG   VP++++I+F+ GA+IA
Sbjct: 130 ELLVFLEMLGRLGSVLARLAFKPSRLR--LTSTIYQLHKVGWQAVPIMVMITFLIGAIIA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG F   +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEIDA
Sbjct: 188 QQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + TMGLD + +L+ PR+ AL+I+LP+L  + + +A+ G  ++ W Y  +  A+F +R H 
Sbjct: 248 LTTMGLDPLEVLVLPRVLALVIALPILAFIGSIAALYGGGLISWLYGGMSPAIFIARLHE 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             ++ +   GLIKAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D L
Sbjct: 308 AVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGL 367

Query: 364 FAIFYFAIGI 373
           FA+F+ +IG+
Sbjct: 368 FAVFFASIGM 377


>gi|149374946|ref|ZP_01892719.1| putative permease of ABC transporter [Marinobacter algicola DG893]
 gi|149360835|gb|EDM49286.1| putative permease of ABC transporter [Marinobacter algicola DG893]
          Length = 374

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 116/364 (31%), Positives = 195/364 (53%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W  P    +  DV  A+ K +      V+L+ I  +DT GA L++  +  +   
Sbjct: 14  LTVSGDWTLPNYGSLKRDVQNAVLKEVPDGH-SVNLATINALDTAGASLLVDLLGAHELH 72

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +       +   L+         + + +++F  N        IG+ I  F +     
Sbjct: 73  ELTEQTPELSSERQELLRLVANAMA-SPEGEKAFCSNPITEFLAGIGENIEDFWHQQRLL 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G +++      A+ ++++    SL+  ++  G++ +P+V L++F+ GAV+A  GA 
Sbjct: 132 IGFTGQILATLASILATPWRWRI--TSLVAHVHQTGLNALPIVALLTFLVGAVVAFLGAT 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGA I++++L++   LRE GVLL A+++AGR+ SA  A++GSMK NEEIDA+RT G
Sbjct: 190 ILDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAQLGSMKANEEIDALRTFG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L  V +L+ PR+ A++ISLP+LT +   S IIG S+V     DI      +   +   + 
Sbjct: 250 LSPVELLVIPRVLAMVISLPILTFVGMISGIIGGSVVCVLALDISVPQILNILETKVKVV 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL KAP  A  I ++   EGF     + S+G+  T+ VVQSI +VI++DS+ AIF+
Sbjct: 310 HLLVGLGKAPVFAFVIAVIGCLEGFKASGSAQSVGEHTTSAVVQSIFMVILLDSIAAIFF 369

Query: 369 FAIG 372
             +G
Sbjct: 370 MEMG 373


>gi|114320361|ref|YP_742044.1| hypothetical protein Mlg_1205 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226755|gb|ABI56554.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 377

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 187/366 (51%), Gaps = 8/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + + +G+W    ++ +A   +  +    ++    +D SA+  +D  GA  +    E+   
Sbjct: 20  LIQCSGDWTRTGLTRLAGQDLRTL-PPPRTGGWTLDASAMGRLDLTGARQLHRLQERLRE 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +     +     +    +     + +  ++                +G++ V  +    +
Sbjct: 79  RGDSVRLGEERPEHMDGLLAFTERAVSERR-----PPPPPPGPLERLGRQTVIRLGHFWA 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G +           +  +     L  ++   GV  +P++ L++F+TG VIA QG 
Sbjct: 134 FLAFIGEIALEALPRLLRPWTIR--WKQLSAEIQKAGVQALPIIGLLAFLTGLVIAYQGG 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L ++GA IF ++L+S+  LRE+  +LTA+++AGR+GS+  A++G+MKI EEIDA+RT+
Sbjct: 192 DTLERYGANIFLVELVSVTMLREMAPMLTAIVVAGRTGSSWAAQLGTMKITEEIDALRTL 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+    +LI PR+ AL++ LPLLTI A+   I+G  +V    + +    F +R       
Sbjct: 252 GISPFDMLILPRLMALMVVLPLLTIYADVLGILGGMLVADLMFGVAMHDFINRLPEAIAT 311

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++++ GL+KAP  A  I  +A  +G  V   + S+G+  T  VVQ+I +VI+ D++F+I 
Sbjct: 312 SHLWVGLVKAPVFALIIVGIACFQGMRVKGSAESVGRATTITVVQAIFLVIVTDAVFSIL 371

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 372 FNLVGL 377


>gi|146342154|ref|YP_001207202.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194960|emb|CAL78985.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 378

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 4/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +   +   R +G+W S  ++++      A  K   +    +DL +++EIDT+GA LI   
Sbjct: 11  ATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKL 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +     +   ++        L+    +   +   P  +   N        +G+  +  
Sbjct: 71  SRRAGVGGRRVEMTGVAASYSGLVDEVRQVNRREIAP--APRPNPIVARLTDLGRSTMGA 128

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D      +L  +              +    SL+ QMY +G   +P+V+LI+F+ GA+
Sbjct: 129 AKDVTIFLDMLAALSFALVRTLRRPRSLRV--TSLVYQMYRIGWQAIPIVVLITFLIGAI 186

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AEIGSMK+ EEI
Sbjct: 187 IAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSMKMREEI 246

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD V +LI PRI ALI++LP+L  + + +A+ G  +V   Y  +   +F +R 
Sbjct: 247 DALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFIARL 306

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   ++ +   G++KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D
Sbjct: 307 HEAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLD 366

Query: 362 SLFAIFYFAIGI 373
            LFAIF+ +IG+
Sbjct: 367 GLFAIFFASIGM 378


>gi|91975833|ref|YP_568492.1| hypothetical protein RPD_1353 [Rhodopseudomonas palustris BisB5]
 gi|91682289|gb|ABE38591.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB5]
          Length = 378

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 135/373 (36%), Positives = 202/373 (54%), Gaps = 4/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++  +      G W + + + +         +   + S  +D++ + EIDTIGA L+  
Sbjct: 10  VTDGDVLELHPGGAWIASQSAALERLFEGVAPQVAAAKSLKIDMTEVIEIDTIGAWLLEK 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +     +        E+   LI    +       P+     N        +G+    
Sbjct: 70  ASREAAQAGRTAHFVGVGERYAGLIEEVRQVNRHRPTPK--PKVNPIIARLDQVGRSAWS 127

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D      + G +              +  L SL  Q+Y VG   +P+V+LI+F+ GA
Sbjct: 128 ATQDIAVFLDMFGALGVALLGVLRRPRSLR--LTSLTYQIYRVGWRAIPIVVLITFLIGA 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 186 IIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGLD V +LI PRI AL+I+LP+LT + + SA+ G  +  W Y  +  AV+ +R
Sbjct: 246 IDALSTMGLDPVEVLILPRIIALVIALPILTFIGSMSALYGGLLTAWFYGGMQPAVYIAR 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI++
Sbjct: 306 LHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVL 365

Query: 361 DSLFAIFYFAIGI 373
           D LFA+F+ +IG+
Sbjct: 366 DGLFAVFFASIGL 378


>gi|110633893|ref|YP_674101.1| hypothetical protein Meso_1540 [Mesorhizobium sp. BNC1]
 gi|110284877|gb|ABG62936.1| protein of unknown function DUF140 [Chelativorans sp. BNC1]
          Length = 395

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 159/370 (42%), Positives = 217/370 (58%), Gaps = 3/370 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ENG  V R +GNW +  +S + DD +  +         I+DL  +  +DT GA L+    
Sbjct: 28  ENGALVCRLSGNWTTRTVS-LVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAWLVSRLA 86

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                      +S   E    L++       +   P+     N   N+   +G+ I    
Sbjct: 87  AAQKENGAQVEISGQSEAASILLAAIEPTAQEPDVPKDGRRGNLIVNILAAMGRTIYDIK 146

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +D     HILG  IS         +       ++  Q+  +GV  +P+++L+S V GA+I
Sbjct: 147 DDVLYGMHILGATISGAQMKLGRGHAVNP--AAIANQIDRMGVGSIPIIVLMSAVVGAII 204

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEI+ +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE+D
Sbjct: 205 AQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAIMIAGRSGSAITAEIGSMKMREEVD 264

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++++P LTI+ANFSA+ GA +V W Y DI  A F  R H
Sbjct: 265 ALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFIQRLH 324

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L +IF GLIKAPFMA  IGI+A  EG  VG  + SLGK VT  VV++I +VI+ID 
Sbjct: 325 DAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVIVIDG 384

Query: 363 LFAIFYFAIG 372
           LFA+FY AI 
Sbjct: 385 LFAMFYAAID 394


>gi|294624127|ref|ZP_06702865.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294663966|ref|ZP_06729386.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292601572|gb|EFF45571.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606261|gb|EFF49492.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 370

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 118/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DQAQVRLAGSWVLATALPQAE-----LLQAVPEGVRRIDARGIQQLDSAGVLQLLRFAGR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 70  MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ AL+ +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALVFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|21244295|ref|NP_643877.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109945|gb|AAM38413.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 370

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DQAQVRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 70  MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|148257023|ref|YP_001241608.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409196|gb|ABQ37702.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 378

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 135/372 (36%), Positives = 210/372 (56%), Gaps = 4/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +   +   R +G+W S  ++E+ +    A  K   + +  +DL A++EIDT+G  L+   
Sbjct: 11  ATGELLELRPSGSWVSLNVTELENLTRSASGKVGNAKAVKLDLGAVSEIDTVGVWLLEKL 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                   +L  ++   E    L+    +   ++  P      N        +G+  +  
Sbjct: 71  SRSAAAGGRLVEMTGVAENYVGLVEEVRQVNRRDIAP--PPRQNPIVAKLTDLGRSTLGA 128

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D      +L  +        A     +    SL+ QMY +G   +P+V+LI+F+ GA+
Sbjct: 129 ARDVTVFLDMLAALSLALVRTLARPRSLRV--TSLVYQMYRIGWQAIPIVVLITFLIGAI 186

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ EEI
Sbjct: 187 IAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEI 246

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD V +LI PRI ALI++LP+L  + + +A+ G  +V   Y  +  A+F +R 
Sbjct: 247 DALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPAIFIARL 306

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   ++ +   G+ KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI++D
Sbjct: 307 HDAVSVTHFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLD 366

Query: 362 SLFAIFYFAIGI 373
            LFA+F+ +IG+
Sbjct: 367 GLFAVFFASIGL 378


>gi|325928564|ref|ZP_08189752.1| putative integral membrane protein [Xanthomonas perforans 91-118]
 gi|325541103|gb|EGD12657.1| putative integral membrane protein [Xanthomonas perforans 91-118]
          Length = 370

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DQAQVRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 70  MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|312958198|ref|ZP_07772721.1| ABC transport system permease protein [Pseudomonas fluorescens WH6]
 gi|311287629|gb|EFQ66187.1| ABC transport system permease protein [Pseudomonas fluorescens WH6]
          Length = 382

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 119/366 (32%), Positives = 193/366 (52%), Gaps = 5/366 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            + R  G+W     + +         +      A +DL+ +  +DT GA L++  +    
Sbjct: 19  ALLRITGDWTLAHYANLKKLADKLDGQYDAG--ARIDLNGLGALDTAGASLLVELLGPTR 76

Query: 67  GKIKLQGVS-THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
            +   +    T      +L+   +R       P+++    +   L   IG+ +     DS
Sbjct: 77  IEQSAEQTDCTLSAADRALLKTVYRSLNDFCVPEKAPEETAGMQLLARIGRAVDTVWQDS 136

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +GL++           +++     ++  +  VG+   P+V L++F+ GAV+A  
Sbjct: 137 KQLLGFIGLILETFARGIFRPKRWRI--TPMVAHLEQVGLDAAPIVALLTFLVGAVVAFL 194

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA  L  FGA IF++DL++   LRE GVLLTA++IAGR+ SA  A+IGSMK NEEIDAIR
Sbjct: 195 GATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIR 254

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD + +L+ PR+ AL+++LP+LT LA  S I+G  +V     DI  A+F S   S  
Sbjct: 255 TLGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDI 314

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   G++KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A
Sbjct: 315 GVQHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAA 374

Query: 366 IFYFAI 371
           +F+  +
Sbjct: 375 LFFMEM 380


>gi|166713439|ref|ZP_02244646.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 370

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 70  MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRIGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|289662615|ref|ZP_06484196.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668440|ref|ZP_06489515.1| ABC transporter permease [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 370

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 70  MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVTGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|91976115|ref|YP_568774.1| hypothetical protein RPD_1636 [Rhodopseudomonas palustris BisB5]
 gi|91682571|gb|ABE38873.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB5]
          Length = 383

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 128/373 (34%), Positives = 196/373 (52%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         AG+W +     +   V  A   +    +  +D+S +  +DT GA LI  
Sbjct: 16  IARGEGLALCAAGSWTARFAPSLERIVADAEKLTGTRPNIFIDVSEVARLDTFGAWLIER 75

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    + +             + +     +G+ +  
Sbjct: 76  LRRNLTQDGVEARIAGLSANYASLVDEVRQVQPDVPAVASG---GALRAPIEKLGRTMYV 132

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F +D  +   +LG V++           F+  L S +  +  V    VP+V+LI+F+ G 
Sbjct: 133 FADDIVALISMLGAVLAGVMRAILHPTTFR--LTSTVHHLEQVCWRAVPIVVLITFLIGC 190

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 191 IIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREE 250

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +LI PR+ AL++++P+LT L   SA+ G  +V W Y  +    F  R
Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALLLAMPILTFLGAMSALYGGGLVAWLYGGVDPEAFLLR 310

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IGIVA  EG AV   + SLG   T  VV+ I  VI++
Sbjct: 311 LRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVKGSAESLGSHTTASVVKGIFFVIVM 370

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+ +IGI
Sbjct: 371 DGVFAIFFASIGI 383


>gi|158423837|ref|YP_001525129.1| hypothetical protein AZC_2213 [Azorhizobium caulinodans ORS 571]
 gi|158330726|dbj|BAF88211.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
          Length = 408

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 134/372 (36%), Positives = 203/372 (54%), Gaps = 7/372 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E         G W S     +   V+   +   ++ +  +DLS +  +DT GA L+   
Sbjct: 44  AEGDHIKVEGQGAWTSEYADSLEQAVMQVASHYGEAKAVEIDLSRLDRMDTFGALLLERL 103

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +  K     +         LI    R   +               +   IG+++V  
Sbjct: 104 RRVWQEKGVEPQIVGLNPAYSVLIEEMTRTGREP-----PPPERKPPGVFERIGREMVVI 158

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+ S  + +G V++  G        F+    S++ QM  VG   +P++ILI+F+ G +
Sbjct: 159 TEDAVSLLNFVGAVVAAFGRVLTRPRSFR--FTSMVNQMDRVGFRAMPIIILITFLIGCI 216

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQG F   +FGA+I+ +D++ +L LRE+GVL+ ++MIAGRSGSA  AE+GSM++ EE+
Sbjct: 217 IAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEV 276

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG D V +L+ PR+ ALII LPLLT + + +A+IG  +V W Y  I   VF +R 
Sbjct: 277 DALRVMGFDPVEVLVVPRLLALIICLPLLTFVGSMAAMIGGGLVAWFYGGIAPDVFINRL 336

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               TLA    G+IKAPFMA  IG+V   EG  VG  + SLG+  T  VV++I +VI++D
Sbjct: 337 KDAITLAQFEVGMIKAPFMAAIIGVVGCMEGLRVGGSAESLGQHTTASVVKAIFLVIVVD 396

Query: 362 SLFAIFYFAIGI 373
            LFAIF+ +I +
Sbjct: 397 GLFAIFFASIDM 408


>gi|84622391|ref|YP_449763.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578633|ref|YP_001915562.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84366331|dbj|BAE67489.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188523085|gb|ACD61030.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 370

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+   +   D
Sbjct: 70  IGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRIGQD 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|170724242|ref|YP_001751930.1| hypothetical protein PputW619_5085 [Pseudomonas putida W619]
 gi|169762245|gb|ACA75561.1| protein of unknown function DUF140 [Pseudomonas putida W619]
          Length = 377

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W     + +  D      ++     A+ DLS + ++DT GA L+   +      
Sbjct: 20  LRIAGDWTLAHYASLKRDSERL--RTQYDADAVADLSQLGQLDTAGASLLAELLGSERLS 77

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              Q +      L       +        P +    +    L   IG+ +     D+   
Sbjct: 78  HCTQELPDASRALL---KNVYCSVQDYCIPVKEPERHVLILLLERIGRAVNTLWQDTLQL 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL++          ++++  L  ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 135 LGFIGLILETLLRRALQPHRWR--LTPVVSHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA +F++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 193 VLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   + 
Sbjct: 253 LNPIELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALSLDISPAMFLSLLQSDIGVQ 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F 
Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFC 372

Query: 369 FAIG 372
             +G
Sbjct: 373 MEMG 376


>gi|237808113|ref|YP_002892553.1| hypothetical protein Tola_1352 [Tolumonas auensis DSM 9187]
 gi|237500374|gb|ACQ92967.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187]
          Length = 381

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 110/369 (29%), Positives = 197/369 (53%), Gaps = 4/369 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+G  + R +G+W       +   +     + I     + D   +  +DT GA L++  +
Sbjct: 15  ESGHVLLRISGDWTLTHYVMLKRQITSVQEQMIADTPILWD--DLGSLDTAGAALLVELL 72

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    +     S    +  +L+        ++   ++    ++   +  HIG+ ++   
Sbjct: 73  GQVRLSLLTTQDSGLSAERLALLHSVAAALKESTNIEKQPKESAISEMLAHIGQVVIHLG 132

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               +    +GL I           +++    SL   +   G++ +P++ L++F+ GAV+
Sbjct: 133 QQQIALLGFIGLTIETLVRSLIHPRRWRI--TSLAAHIEQTGLNAIPIIALLTFLVGAVV 190

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  G   LS FGA I+++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEID
Sbjct: 191 AFLGTTVLSDFGASIYTVDLVAFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEID 250

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           AIR +GL+ + +L+ PR+ A++ISLP+LT +A    +IG ++V +   DI   +F +   
Sbjct: 251 AIRALGLNPIELLVLPRVLAMLISLPILTFIAMACGMIGGAVVCFLELDITPRLFLTILQ 310

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +++ F G+ KAP  A  + ++   EGF VG  + S+G+   + VVQSI +VI++D+
Sbjct: 311 RDIDISHFFVGIGKAPLFAFIVAVIGCLEGFKVGGSAQSVGEHTISSVVQSIFMVILLDA 370

Query: 363 LFAIFYFAI 371
           L A+F+  +
Sbjct: 371 LAALFFMEM 379


>gi|148555653|ref|YP_001263235.1| hypothetical protein Swit_2742 [Sphingomonas wittichii RW1]
 gi|148500843|gb|ABQ69097.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1]
          Length = 365

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 14/365 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V  F G      I +++  +              +DL  +  IDT+GA L+     ++  
Sbjct: 13  VLHFTGALTLARIGDLSRRLEALDEVPR-----TIDLGEVDRIDTVGAWLVHRIAREH-- 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            +++ G    + QL   I+   +         R      F  +   IG       +    
Sbjct: 66  DVEIVGADADVCQLIEQIAEADK-----PLKIRPDSSPPFFRVLREIGDATSAAAHSLAG 120

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G  +           +F+    ++ RQ   VGV  + ++ L+SF+ G VIAQQGA
Sbjct: 121 LIGFFGATLIGLWGLVTHPRRFRYN--AMARQFEVVGVKALAIIGLMSFLIGIVIAQQGA 178

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGAE+F+++L+  + LRE+GVL+TA+M+AGRSGSA  A++GSMK+ EE+DA+RT+
Sbjct: 179 VQLRQFGAEVFAVNLIGRITLRELGVLMTAIMVAGRSGSAFAAQLGSMKLAEEVDAMRTI 238

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  LI PR+ + ++ +PLL   A   AIIG  I  W   DIP   +  R      +
Sbjct: 239 GVSPMEALILPRVLSTVVLMPLLGFYAAVIAIIGGGIFCWIDLDIPPITYVQRIREVVPM 298

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI++D++FA+F
Sbjct: 299 TDLWVGLIKAPVFGMLIALCGCYQGMQVEGNAEEVGLRTTASVVQAIFLVIVLDAVFAVF 358

Query: 368 YFAIG 372
           + +IG
Sbjct: 359 FSSIG 363


>gi|325915744|ref|ZP_08178046.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538008|gb|EGD09702.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 370

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R +G+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DQAQVRLSGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFAGR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+        
Sbjct: 70  MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQG 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|323136828|ref|ZP_08071909.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242]
 gi|322398145|gb|EFY00666.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242]
          Length = 380

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 130/369 (35%), Positives = 205/369 (55%), Gaps = 5/369 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           NG      +G+W       +       +++  +     +DLS + ++DT GA LI     
Sbjct: 16  NGGERLALSGDWILIASRRLEQKAQQLVDEGGRVKFVTIDLSGVEKLDTAGAWLINRARH 75

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +         ++    +  +++     ++ +    +    +N+  +L   +G  +V  + 
Sbjct: 76  ELAHADVGVALAHARPEHHTMLEEAAFREFEKPPRR---RFNAIVDLLADLGASVVDALR 132

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +       LG  I+           F+    SL+  M  +G    P+++LI+ + GA++A
Sbjct: 133 EFYRGVAFLGEFIAAMAYVATHPGHFR--FTSLVFHMETIGFRSAPIIVLINLLVGAIVA 190

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG FQL +FGA  +++ L+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA
Sbjct: 191 QQGIFQLLKFGASSYTVSLIGILVLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDA 250

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MGL  + +LI+PR+ ALI+SLP+LT +A+ +A+ G  +V W Y  I  A F S    
Sbjct: 251 LRVMGLSPIEVLIAPRVLALIVSLPILTFIADMAALFGGLLVSWSYGGISPAAFLSLLKE 310

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L     G+IKAPFMA  IG++A  +G      + SLG++VT+ VV+SI +VI++D L
Sbjct: 311 AIALHTFLVGMIKAPFMALVIGLIAAMDGLETKGSAESLGRQVTSSVVKSIFMVIVLDGL 370

Query: 364 FAIFYFAIG 372
           FAIF+ +I 
Sbjct: 371 FAIFFASID 379


>gi|209549578|ref|YP_002281495.1| hypothetical protein Rleg2_1984 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535334|gb|ACI55269.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 383

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 154/371 (41%), Positives = 222/371 (59%), Gaps = 5/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S       R  GNW+S  +  +  D    +++  ++    VDLS IT+IDT G  L+   
Sbjct: 17  SGGSGQHVRLKGNWRSAYVHFVLRDFEKLLHQ--KAGDLTVDLSDITDIDTAGIWLLCRL 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +          +  ++     +  K  +P+     +    +   IG+     
Sbjct: 75  KKEEEAAGRTVRFEGTNPHIDEMLEMFSEEPAK-PEPELKEKVSLAARILAPIGRMTYDI 133

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 134 WDNFAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 191

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI
Sbjct: 192 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 251

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F SR 
Sbjct: 252 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAAVAWGYSGITFANFLSRL 311

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D
Sbjct: 312 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMD 371

Query: 362 SLFAIFYFAIG 372
            LFA+FY AI 
Sbjct: 372 GLFAMFYAAID 382


>gi|241204915|ref|YP_002976011.1| hypothetical protein Rleg_2195 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858805|gb|ACS56472.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 394

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 156/371 (42%), Positives = 225/371 (60%), Gaps = 5/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      R  GNW+S  I  +  D    + K  ++    VDLS I+EIDT G  L+   
Sbjct: 28  ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLTVDLSDISEIDTAGIWLLCRL 85

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +          +  ++     +  K + P+++   +    +   IGK   + 
Sbjct: 86  KKQEEAGGRTVRFEGTNSHIDEMLEMVSEEPAKVE-PEQTEKVSLAARIFAPIGKMTYEV 144

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 145 WDNFAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 202

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI
Sbjct: 203 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 262

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F SR 
Sbjct: 263 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRL 322

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D
Sbjct: 323 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMD 382

Query: 362 SLFAIFYFAIG 372
            LFA+FY AI 
Sbjct: 383 GLFAMFYAAID 393


>gi|167031179|ref|YP_001666410.1| hypothetical protein PputGB1_0158 [Pseudomonas putida GB-1]
 gi|166857667|gb|ABY96074.1| protein of unknown function DUF140 [Pseudomonas putida GB-1]
          Length = 377

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 188/364 (51%), Gaps = 7/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +      ++  +   + DLS +  +DT GA L+   +      
Sbjct: 20  LRITGDWTLAHYANLKRESEQL--RTQYAADTVADLSQLGRLDTAGASLLAELLGSERLS 77

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              Q +      L       +        P +    N    L   IG+ +     DS   
Sbjct: 78  RCTQDLPEASRALL---KNVYCSVQDYCIPVKEPERNVLLMLLERIGRAVGTLWQDSMQL 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 135 LGFVGVILETLLRRALQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 193 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL+ISLPLLT +A    +IG ++V     DI  A+F S   S   + 
Sbjct: 253 LNPMELLVVPRVLALLISLPLLTFVAMICGMIGGAVVCALTLDISPAMFLSLLQSDIGVQ 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+
Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 372

Query: 369 FAIG 372
             +G
Sbjct: 373 MEMG 376


>gi|206575650|ref|YP_002235755.1| putative ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|206570494|gb|ACI12140.1| putative ABC transporter, permease protein [Klebsiella pneumoniae
           342]
          Length = 382

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/364 (31%), Positives = 187/364 (51%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W     + +   V     + +   +AI DLS +  +DT GA L++  M +    
Sbjct: 22  ISASGDWVLAHYAYLEPAVSALQPQLLS--NAIFDLSQLGTLDTAGATLLVKLMGEKKVL 79

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +   T   +   L+            P           L  +IGK +  F  +  + 
Sbjct: 80  ELERIAPTLPIERRVLLQTVRSAIQNYVTPPAQHQPGIVTELLANIGKSVESFWQNLVAL 139

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +            ++    SL+  +  +G++ VP++ L++F+ GAVIA  G+ 
Sbjct: 140 IGFIGLTMEALFATLLRPAHWRV--TSLVANLQQIGLNAVPIIALLTFMVGAVIAFLGST 197

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            LS FGA IF++ L++   LRE  VLL A+++AGR+ SA  A+IG MK NEEIDAI+TMG
Sbjct: 198 VLSTFGASIFTVQLVAFSFLREFAVLLAAILMAGRTASAFTAQIGLMKANEEIDAIQTMG 257

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+++LP++T +     I+G  +V     DI   +F +   +     
Sbjct: 258 LNPVELLVLPRVLALLVALPMMTFIGMICGILGGIVVCALTLDISPTMFLTIMQNNVGFE 317

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           + + G+IKAP  A  I I+   EGF V   + S+G+  T  VV SI +VI++D++ A+F+
Sbjct: 318 HFWVGMIKAPVFAFLIAIIGCLEGFKVSGSAESVGEHTTASVVHSIFVVILLDAVAALFF 377

Query: 369 FAIG 372
             +G
Sbjct: 378 MEMG 381


>gi|26986887|ref|NP_742312.1| hypothetical protein PP_0142 [Pseudomonas putida KT2440]
 gi|24981490|gb|AAN65776.1|AE016203_9 ABC transporter, permease protein, putative [Pseudomonas putida
           KT2440]
          Length = 377

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 7/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +      +S      + DLS +  +DT GA L+   +      
Sbjct: 20  LRITGDWTLAHYANLKRESERL--RSHCPADTVADLSQLGRLDTAGASLLAELLGSERLS 77

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +    + L       +        P +    N    L   IG+ +     DS   
Sbjct: 78  HCTHALPEASQALL---KNVYCSVQDYCIPVKEPERNVLLLLLERIGRAVGTLWQDSMQL 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 135 LGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 193 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   + 
Sbjct: 253 LNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGVQ 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+
Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 372

Query: 369 FAIG 372
             +G
Sbjct: 373 MEMG 376


>gi|87200858|ref|YP_498115.1| hypothetical protein Saro_2845 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136539|gb|ABD27281.1| protein of unknown function DUF140 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 372

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 117/370 (31%), Positives = 192/370 (51%), Gaps = 13/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +       F+G      +      +     + I    A +DLSA+T +DT+GA  +    
Sbjct: 14  QGAGATLAFSGPMTVSSLGLTDQRL-----RHITDPVARIDLSAVTAMDTVGAWTVWRLS 68

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  ++   S   ++L   IS         + P        F+ +   +G  ++   
Sbjct: 69  RDTGA--EIVACSEEAQKLVDAISKADSNAHSIEPP----RLPLFQRVPEKVGDAMIGLG 122

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             +      LG VI   G       +F+    +L+ QM  VGV+ + ++ L+SF+ G VI
Sbjct: 123 LGAVQVLGFLGQVILAIGTLVRHPSRFRM--KALVHQMELVGVNALAIIGLMSFLVGIVI 180

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGA QL QFGAEI++++L+  L LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+D
Sbjct: 181 AQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 240

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PRI A ++ +PLL   + F  IIG + +      IPF  F +R  
Sbjct: 241 AMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARIQ 300

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L +++ G+ KAP     + +    +G  V  ++  +G + T  VV +I +VI++D+
Sbjct: 301 EVVPLHDVWVGITKAPVFGLIVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLDA 360

Query: 363 LFAIFYFAIG 372
            FA+F+  IG
Sbjct: 361 FFAVFFTEIG 370


>gi|188993114|ref|YP_001905124.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167734874|emb|CAP53086.1| ABC transporter permease [Xanthomonas campestris pv. campestris]
          Length = 370

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 119/364 (32%), Positives = 190/364 (52%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     + L   I   + ++ K +          F      +G+            
Sbjct: 74  EDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQGILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +   G       +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIGRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|241661797|ref|YP_002980157.1| hypothetical protein Rpic12D_0175 [Ralstonia pickettii 12D]
 gi|240863824|gb|ACS61485.1| protein of unknown function DUF140 [Ralstonia pickettii 12D]
          Length = 374

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 180/371 (48%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +         ++   ++                      N    +G+ ++ F 
Sbjct: 75  GNQWP--EHLDARPDQRRMLDRVAKLD-------PGGWKQRLAPRMNPVAILGEGMLDFF 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           + + +   ++G ++ + G F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHASNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|187927276|ref|YP_001897763.1| hypothetical protein Rpic_0168 [Ralstonia pickettii 12J]
 gi|309780024|ref|ZP_07674777.1| competence protein ComM [Ralstonia sp. 5_7_47FAA]
 gi|187724166|gb|ACD25331.1| protein of unknown function DUF140 [Ralstonia pickettii 12J]
 gi|308921194|gb|EFP66838.1| competence protein ComM [Ralstonia sp. 5_7_47FAA]
          Length = 374

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 180/371 (48%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +         ++   ++                      N    +G+ ++ F 
Sbjct: 75  GNQWP--EHLDARPDQRRMLDRVAKLD-------PGGWKQRLAPRMNPVAILGEGMLDFF 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           + + +   ++G ++ + G F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHAGNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|77456265|ref|YP_345770.1| hypothetical protein Pfl01_0037 [Pseudomonas fluorescens Pf0-1]
 gi|77380268|gb|ABA71781.1| putative ABC transport system, permease [Pseudomonas fluorescens
           Pf0-1]
          Length = 382

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 118/367 (32%), Positives = 194/367 (52%), Gaps = 5/367 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G+W     +E+   +   +N    +++  +DL+ +  +DT GA L++  +    
Sbjct: 19  ARLRVTGDWTLAHYAEL-KQLSETLNGQYDANTP-IDLNGLGALDTAGASLLVELLGSER 76

Query: 67  GKIKLQGVSTHIEQL-FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                +     I     +L+   +R       P +    +    L   IG+ +     D+
Sbjct: 77  LGKSAEHPDCTISSADRALLQTVYRSLTDFCVPIKEPEISVSVQLLTRIGRAVDTVWQDT 136

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +GL++           +++     +I  +   G+   P+V L++F+ GAV+A  
Sbjct: 137 LQLLGFVGLILETIARSLFRPKRWRI--TPMIAHIEQTGLDAAPIVALLTFLVGAVVAFL 194

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA  L+ FGA +F++DL+    LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDAIR
Sbjct: 195 GATVLASFGASVFTVDLVGFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIR 254

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD + +L+ PR+ AL+++LP+LT LA    I+G ++V     DI  A+F S   S  
Sbjct: 255 TLGLDPMELLVVPRVLALLVALPMLTFLAMICGIVGGAVVCAVSLDISPAMFLSLLQSDI 314

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A
Sbjct: 315 GIQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAA 374

Query: 366 IFYFAIG 372
           +F+  +G
Sbjct: 375 LFFMEMG 381


>gi|307945713|ref|ZP_07661049.1| ABC transporter permease protein [Roseibium sp. TrichSKD4]
 gi|307771586|gb|EFO30811.1| ABC transporter permease protein [Roseibium sp. TrichSKD4]
          Length = 382

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 133/366 (36%), Positives = 208/366 (56%), Gaps = 6/366 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W    ++E    V   +          +D SAI  +DT GA L+         
Sbjct: 23  VLCLSGDWTISSLAEAERLVESIMLDKY--RVTCLDTSAIDNLDTSGAWLVHRLRGSLEY 80

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           + +   +    E  F+L     R      KP++S    S        GK++V    D+ +
Sbjct: 81  QGRRVELIGLTENRFNLFCQIERHHPPEYKPEKSKV--SLVGFLEATGKQVVNVGRDAIA 138

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             HILG +            + +G   ++  Q     +  VP+V L+SF+ GA+I+QQG 
Sbjct: 139 MLHILGSLGVVLSTVLLQPKRLRGI--AVAVQFDRTCIGAVPIVALMSFLIGAIISQQGG 196

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           F L QFGA+I+ +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ EE+DA+  +
Sbjct: 197 FYLRQFGADIYVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALHVI 256

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL    +L+ PRI AL+I+LP+LT +A+ +A++GA +  W Y DIP A + ++  +  T+
Sbjct: 257 GLSVTEVLVLPRILALMIALPVLTFIADMAALVGAGLTTWVYLDIPPAAYLTQLQAAITM 316

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++ G++KAPFMA  IG++A  EG  VG  + SLG+  T  VV++I +VI++D +FAIF
Sbjct: 317 KTLWVGIVKAPFMALIIGLIACVEGLKVGGSAESLGRHTTMSVVKAIFLVIVVDGVFAIF 376

Query: 368 YFAIGI 373
           + +I +
Sbjct: 377 FASINV 382


>gi|116252407|ref|YP_768245.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257055|emb|CAK08149.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 389

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 156/371 (42%), Positives = 225/371 (60%), Gaps = 5/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      R  GNW+S  I  +  D    + K  ++    VDLS I+EIDT G  L+   
Sbjct: 23  ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLSVDLSDISEIDTAGIWLLCRL 80

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +          +  ++     +  K + P+++   +    +   IGK   + 
Sbjct: 81  KKQEEAGGRTVRFEGTNSHIDEMLEMFSEEPAKVE-PEQTEKVSLAARIFAPIGKMTYEV 139

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 140 WDNFAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 197

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI
Sbjct: 198 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 257

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y  I FA F SR 
Sbjct: 258 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRL 317

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D
Sbjct: 318 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMD 377

Query: 362 SLFAIFYFAIG 372
            LFA+FY AI 
Sbjct: 378 GLFAMFYAAID 388


>gi|90422963|ref|YP_531333.1| hypothetical protein RPC_1452 [Rhodopseudomonas palustris BisB18]
 gi|90104977|gb|ABD87014.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           BisB18]
          Length = 377

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 128/373 (34%), Positives = 199/373 (53%), Gaps = 5/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++         AG+W +P    +   V  A   S    +  +D+SA+ ++DT GA LI  
Sbjct: 10  IARGNGLALCAAGSWTAPFAPVLERIVAEAEALSGTRPNISIDVSAVAKLDTFGAWLIER 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        ++       SL+    R K      +      S +     +G+ +  
Sbjct: 70  LRRSLTQGDAEATIAGLSANYSSLVDEVRRVKDPEPSKRGGI---SLRAPVERLGRSVAG 126

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F++       + G V++           F+  L S +  +  V    VP+V+LI+F+ G 
Sbjct: 127 FLDTIVGLVAMTGAVMAGMLRVVMHPGSFR--LTSTVHHLEQVCWRAVPIVMLITFLIGC 184

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++AQQG F   +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 185 IVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREE 244

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D + +LI PR+ AL++++P+LT L   +A+ G  +V W Y  +    F  R
Sbjct: 245 IDALRTMGFDPIDVLIMPRMMALVLAMPILTFLGVVAALYGGGLVAWLYGGVDPDAFLLR 304

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                ++ +   G+IKAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  VI++
Sbjct: 305 LRDAISIDHFTVGMIKAPVMAIVIGIVACVEGLAVAGSAESLGRHTTASVVKGIFFVIVM 364

Query: 361 DSLFAIFYFAIGI 373
           D +FAIF+ +IG+
Sbjct: 365 DGVFAIFFASIGM 377


>gi|27381176|ref|NP_772705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354343|dbj|BAC51330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 378

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 131/374 (35%), Positives = 205/374 (54%), Gaps = 10/374 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                  R  G+W +  ++ +            +S +  +D+S ++ +DT+GA ++    
Sbjct: 12  SGDGLKLRPQGSWTAANVAMLETLSRSVGADVDRSRAVTLDMSGVSALDTLGAWVLEKLS 71

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
            +        +  GV+ H   L   +   +R                       +GK  V
Sbjct: 72  RRAATSGRSAEFVGVADHFSGLMDEVREVNRHTPAPAAAPNPLLLR-----LGDLGKSTV 126

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
               D      +LG +              +  L SL+ Q+Y +G   +P+V LI+F+ G
Sbjct: 127 GAREDITIFLQMLGALFMAIFGVLRRPRSLR--LTSLVYQLYRIGWQAIPIVALITFLIG 184

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A+IAQQG F   +FGAE +++D++ IL LRE+GVL+ A+M+AGRSGSA  AE+GSMK+ E
Sbjct: 185 AIIAQQGFFHFRRFGAESYTVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMRE 244

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+ TMGLD V +LI PR+ AL+I+LP+L  + + +A+ G  +V   Y D+  A++ +
Sbjct: 245 EIDALSTMGLDPVGVLILPRVAALVIALPILAFIGSIAALYGGGLVAQFYGDMGPAIYIA 304

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R H   ++ +   G++KAPFMA  IGIVA  EG  V   + SLG++ TT VV+SI +VI+
Sbjct: 305 RLHEAISVTHFEVGILKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFLVIV 364

Query: 360 IDSLFAIFYFAIGI 373
           +D LFAIF+ +IG+
Sbjct: 365 LDGLFAIFFASIGM 378


>gi|21230110|ref|NP_636027.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769899|ref|YP_244661.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111638|gb|AAM39951.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575231|gb|AAY50641.1| ABC transporter permease [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 370

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 189/364 (51%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +   K
Sbjct: 19  VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                     + L   I   + ++ K +          F      +G+            
Sbjct: 74  EDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQGILEL 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA  G+ 
Sbjct: 128 NSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAIRT+G
Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T  L 
Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ A+++
Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365

Query: 369 FAIG 372
             +G
Sbjct: 366 MKMG 369


>gi|120609009|ref|YP_968687.1| hypothetical protein Aave_0306 [Acidovorax citrulli AAC00-1]
 gi|120587473|gb|ABM30913.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1]
          Length = 375

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 172/370 (46%), Gaps = 12/370 (3%)

Query: 6   ITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             V    G W + ++       +V   + ++        DL ++  +D +GA+L+     
Sbjct: 16  GPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVDWLDHVGAQLLWNHWG 75

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +   +      +   ++           P               +G K++  + 
Sbjct: 76  RVWP--ERIALDDAQRDMLDRVAEFTVIDRPPVPPW------RLVEEVDRLGVKVLHALG 127

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  ++G ++ + G    +  +       +   +Y +G + +P+  ++ F+ G V+A
Sbjct: 128 HGRHLLELVGQLVIDLGSALRAPRRAP--WRDVSGHLYRMGATALPITAIVGFLIGVVLA 185

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 186 YLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDA 245

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     L+ PR  AL I++PL+ +     A+ G  +      D+  A F     +
Sbjct: 246 MRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFVQALPN 305

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               +N+   + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D+L
Sbjct: 306 AVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDAL 365

Query: 364 FAIFYFAIGI 373
           FAI +  +GI
Sbjct: 366 FAIAFKNLGI 375


>gi|261855956|ref|YP_003263239.1| hypothetical protein Hneap_1358 [Halothiobacillus neapolitanus c2]
 gi|261836425|gb|ACX96192.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus
           c2]
          Length = 413

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 193/368 (52%), Gaps = 8/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDL-SAITEIDTIGAELIMYFMEK 64
           +TV   +G W    +  +     ++   + ++D   + L S ++  D  GA ++  ++  
Sbjct: 52  VTVLVLSGTWTIHSLQHVPTLDTLSGAPTKKADKPCIVLRSEMSAFDGAGALVLARWIRT 111

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           +        +     +  SL+     + +  +             +   IG+  V+  ++
Sbjct: 112 WRADGFEVDLGEFPPRETSLLQLLDDRLVDTEPAPVKKPK-----MIARIGQFTVEQWHE 166

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + S    LG ++        + ++ +    ++I ++   GV  + +V L+SF+ G V+A 
Sbjct: 167 TRSFLAFLGELVWRGAPLLLTFWRIR--WRAVISEIDAAGVRALGIVGLLSFMIGMVMAY 224

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L  +GA +  +DL+ I+ LRE+G LL A+++AGR+GS+  A++G+M+I EEIDA+
Sbjct: 225 QGGATLQNYGANVLIVDLVGIITLREMGPLLAAIIVAGRTGSSYTAQLGTMRITEEIDAL 284

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G+    ILI P++ ALII+LPLL+I ++   ++G ++V    + + F+V+F R    
Sbjct: 285 RAIGVPPFEILIFPKVLALIITLPLLSIFSDLMGLLGGAVVANYGFGVSFSVYFDRMPEA 344

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +L  ++ GL+K P  A  I ++   +G  V   +  +G   T  VVQ+I +VI+ID+LF
Sbjct: 345 VSLTTLWLGLLKTPVFAIVIALIGCMQGLRVRGSAAEVGHATTVSVVQAIFMVIVIDALF 404

Query: 365 AIFYFAIG 372
           ++ Y  +G
Sbjct: 405 SVLYNVMG 412


>gi|319956950|ref|YP_004168213.1| hypothetical protein Nitsa_1211 [Nitratifractor salsuginis DSM
           16511]
 gi|319419354|gb|ADV46464.1| protein of unknown function DUF140 [Nitratifractor salsuginis DSM
           16511]
          Length = 371

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 175/369 (47%), Gaps = 16/369 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63
           T+    G+W   +   I  ++        ++    +D   +   D+ G  L++     M+
Sbjct: 15  TLIECQGDWTLDQARLIEKELRRL--PLPETPRCRIDFGKVQRFDSAGILLLLELRERMK 72

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K     ++ G+    E++  LI   + ++               + L + IGK  V+ + 
Sbjct: 73  KAGKACEITGLDEKKEKMLHLIERGYGEE---------PLPKRREGLLWRIGKATVEELK 123

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                 H LG +  +          F+      +  + + GV+ + ++ L SF+ G VIA
Sbjct: 124 VVRDFFHFLGELSVSFLRLLFKPSNFRM--RETVYHIQHSGVNALFIIGLTSFLVGLVIA 181

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            +   QL QFGA+I+ +D + I   RE+G ++TA++IAGRS S+  AEIG+MKI EEI A
Sbjct: 182 YESLVQLVQFGADIYVVDGIGIAITRELGPMITAIVIAGRSASSYAAEIGTMKITEEIAA 241

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++T+G D    L+ PRI A++I+LPLL   ++   I+G  I      D+ F  F  R   
Sbjct: 242 MQTLGFDPFYFLVIPRIVAMMIALPLLIFFSDVIGILGGMIATKVQVDLSFTFFIERLQE 301

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +   G++K PF A  I       GF V   + S+G + T  VV +I  VI  D+L
Sbjct: 302 VLAAKHYILGIVKGPFFALIIAATGCFHGFRVTGDTESIGIETTASVVHAIFFVIACDAL 361

Query: 364 FAIFYFAIG 372
           FA+ Y  +G
Sbjct: 362 FAVIYTQLG 370


>gi|118588764|ref|ZP_01546172.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614]
 gi|118438750|gb|EAV45383.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614]
          Length = 382

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 132/365 (36%), Positives = 205/365 (56%), Gaps = 6/365 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W    I++   ++        +     +D+S I  +DT GA LI     +   +
Sbjct: 24  LALSGDWTVSTIADAERELNGLTLD--KKRLTCIDVSRIEHLDTSGAWLIHRTRGRLEFE 81

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +  G+S       +L          + KP    F  S        G+++V   +D+ + 
Sbjct: 82  GRKVGLSGVSPVRKTLFEEIENHHPPSWKPDPGGF--SIAGFLEATGRQMVDVYHDALAM 139

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            HILG +            + +    S+  Q     +  VP+V L+SF+ GA+I+QQG F
Sbjct: 140 LHILGSLGLVLSTVLLQPKRLRSI--SIAVQFDRSCIGAVPIVALMSFLIGAIISQQGGF 197

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L QFGA+IF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ EE+DA+  +G
Sbjct: 198 YLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALHVIG 257

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L    +L+ PRI AL+I+LP+LT +++ +A+ G+ +V W Y DIP A F ++  +  T+ 
Sbjct: 258 LSVTEVLVLPRILALMIALPILTFISDLAALFGSGMVTWAYLDIPPAAFLTQLQAAITIN 317

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +  GL+KAPFMA  +G++A  EG  V   S SLG+  T  VV++I +VI++D  FAIF+
Sbjct: 318 TLVVGLVKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMSVVKAIFLVIVVDGFFAIFF 377

Query: 369 FAIGI 373
            AIG+
Sbjct: 378 AAIGV 382


>gi|85707661|ref|ZP_01038727.1| ABC-type transport system permease component [Erythrobacter sp.
           NAP1]
 gi|85689195|gb|EAQ29198.1| ABC-type transport system permease component [Erythrobacter sp.
           NAP1]
          Length = 370

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 115/370 (31%), Positives = 190/370 (51%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G T+   +G      I ++  ++          +   VDLS + E+DT+GA ++  F 
Sbjct: 13  EGGGTMLALSGPLLVSTIGKLERELSRL-----GHEVGRVDLSDVEEMDTVGAWVVCRF- 66

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
              H    + G +   ++L   +         +           ++ +   +G+K+    
Sbjct: 67  -ATHQSAAITGTTPSAKRLLEAVEAA-----SSDVEITPDRTPVWERVPLALGEKVYAAR 120

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +         G ++   G        F   L + +RQM  VGV+ +P++ L+SF+ G VI
Sbjct: 121 SGVYGVVGFFGQILIGFGSLLRHPSTFP--LKATVRQMEMVGVAALPIIGLMSFLIGIVI 178

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGA QL+QFGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A+IG+MK+ EE+D
Sbjct: 179 AQQGAVQLAQFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEVD 238

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PRI A    + +L   A+   I+G ++V      IPF  F  R  
Sbjct: 239 AMRTIGISPIERLVIPRILACTFMMVVLGFYASIVGIVGGAVVGHLSLGIPFFTFLERIQ 298

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L +++ GL+KAP     + +     G  V  +S  +G + T  VV +I  VI++D+
Sbjct: 299 EVVPLHDVWVGLVKAPVFGLIVALAGCYHGMQVKGNSEQVGIRTTMAVVSAIFAVIVLDA 358

Query: 363 LFAIFYFAIG 372
            FA+F+  IG
Sbjct: 359 FFAVFFTEIG 368


>gi|222086200|ref|YP_002544732.1| ABC transporter [Agrobacterium radiobacter K84]
 gi|221723648|gb|ACM26804.1| ABC transporter [Agrobacterium radiobacter K84]
          Length = 386

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 151/370 (40%), Positives = 223/370 (60%), Gaps = 4/370 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +     +R  GNW+S  +  +   +     +S      ++DLS ++++DT GA LI    
Sbjct: 20  DGNGHRYRLEGNWRSANVHGVLRRIDELTTRS-AGGRVVIDLSDLSDVDTAGALLIRRLK 78

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           E          +      +  L+     +    +KP+     +  + +   IG+ + +  
Sbjct: 79  ESQEAHGASVSIEGSNSHIDELL-TAFTEDPDAEKPEPRQKKSWTERIFAPIGETVYEVW 137

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            +  +  +ILG  +                  S++ Q+ ++GV  VP+++L+S++ GA+I
Sbjct: 138 GNLVAAMYILGSAVRGAQLKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSYLIGAII 195

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+D
Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVD 255

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MGL+ + +LI PR+ AL ++LPLLTILANF+++ GA+ V W Y  I FA F +R H
Sbjct: 256 ALKVMGLNPIGVLIFPRLVALTVALPLLTILANFASLFGAATVTWAYSGITFATFIARLH 315

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              +L+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV+SI +VI++D 
Sbjct: 316 EAISLSTVISGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKSIFVVILMDG 375

Query: 363 LFAIFYFAIG 372
           LFA+FY AI 
Sbjct: 376 LFAMFYAAID 385


>gi|218886600|ref|YP_002435921.1| hypothetical protein DvMF_1505 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757554|gb|ACL08453.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 430

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 200/374 (53%), Gaps = 11/374 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVM-------AINKSIQSDSAIVDLSAITEIDTIGAELIM 59
            V  F+G W    I  +   ++        A +    +    +DL+ +T +DT GA+L+ 
Sbjct: 61  LVLTFSGVWDVASIGRMTARLLRRCAEVGNACSVQGDAPVVHLDLAEVTRLDTAGAQLLC 120

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                         V  H+      +     + I      R+   +        IG  IV
Sbjct: 121 RAA--ASMATAGARVVWHVSDHGQSMLLDRVRAIDISAVPRARRISPVVGALNAIGGSIV 178

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + +  + +    LG+ + +     A  ++ +   +S++  M   G+  VP+V L++F+ G
Sbjct: 179 EELEQARAIIGFLGMFLVSLAAAVARPWRLR--WVSIVHHMEQTGIQAVPIVALLTFLIG 236

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V A  G+ Q ++FGA++F ++L+ +  LRE+GVLLTA+++AGRSGS+  A+IG+M  NE
Sbjct: 237 LVTAYMGSEQFTRFGAQVFVVNLIEVSTLRELGVLLTALIVAGRSGSSFTAQIGAMVANE 296

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R+MGLD + +L+ PR+ AL++ LP+LT +A+F  ++G  I  W    I    F  
Sbjct: 297 EVDAMRSMGLDPMEVLVIPRVVALVLMLPVLTFIADFMGVLGGGIASWLSLGISPGAFAV 356

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           RF     LAN  TGL+KAPF A  IGIV   +GF V   + S+G+  T  VV+SI +VI+
Sbjct: 357 RFQEITRLANFVTGLVKAPFFALIIGIVGCFQGFRVTGSAESVGRLTTQAVVESIFLVIV 416

Query: 360 IDSLFAIFYFAIGI 373
            ++ FAI + ++G+
Sbjct: 417 ANAGFAILFMSLGV 430


>gi|326315184|ref|YP_004232856.1| hypothetical protein Acav_0366 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323372020|gb|ADX44289.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 375

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 12/370 (3%)

Query: 6   ITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             V    G W + E+        +   + K+  +     DL  +  +D +GA+L+     
Sbjct: 16  GPVAALLGRWGAAELGTRPAWKALSAQLAKTPPAAGLGWDLRGVEWLDHVGAQLLWNHWG 75

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +   +      +        ++       +  + P+  +           +G K++  + 
Sbjct: 76  REWPERLSVDGAQ-----RDMLERVAEYTVTRRPPESPWR---LAEEVDRLGVKVLSALG 127

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  ++G ++ +      +  +       +   +Y +G + +P+  ++ F+ G V+A
Sbjct: 128 HGRHLLELVGQLMIDLVRVVRAPRRAP--WRDISGHLYRMGATALPITAIVGFLIGVVLA 185

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 186 YLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDA 245

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     L+ PR  AL I++PL+ +     A+ G  +      ++  A F     +
Sbjct: 246 MRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMNVSPAYFVQALPN 305

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               +N+   + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D+L
Sbjct: 306 AVGFSNLVLAMGKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDAL 365

Query: 364 FAIFYFAIGI 373
           FAI +  +GI
Sbjct: 366 FAIAFKNLGI 375


>gi|86748498|ref|YP_484994.1| hypothetical protein RPB_1373 [Rhodopseudomonas palustris HaA2]
 gi|86571526|gb|ABD06083.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris
           HaA2]
          Length = 378

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 135/373 (36%), Positives = 204/373 (54%), Gaps = 4/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++  +      G W +   + +        ++   + +  +D++ + EIDTIGA L+  
Sbjct: 10  VTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEIDTIGAWLLEK 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                    +        ++   LI    +   +  KP+     N        IG+    
Sbjct: 70  VSRDAAQAGRTAQFVGVADRYAGLIEEVRQVNRRGPKPR--PSVNPIIARLDQIGRSAWS 127

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D      +LG +              +  L SL  Q+Y VG   +P+V+LI+F+ GA
Sbjct: 128 ATQDISVFLAMLGALGVALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIVVLITFLIGA 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 186 IIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMGLD V +LI PRI AL+I+LP+LT + + +A+ G  +  W Y  +  AV+ +R
Sbjct: 246 IDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPAVYIAR 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI++
Sbjct: 306 LHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVL 365

Query: 361 DSLFAIFYFAIGI 373
           D LFA+F+ +IG+
Sbjct: 366 DGLFAVFFASIGM 378


>gi|146341950|ref|YP_001206998.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
 gi|146194756|emb|CAL78781.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           ORS278]
          Length = 377

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 135/371 (36%), Positives = 202/371 (54%), Gaps = 5/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E      R  G W +P    +   V  A   + +S +  +D+S ++++DT GA LI    
Sbjct: 12  EGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERLR 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +        +        SL+    R  +    P       +   +   IG+ +   +
Sbjct: 72  RSFTTGTVEARIDGLSANYASLVDEVRRVSL---APGDDATNVTITGMLGQIGRSVAGIV 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               +   +LG VI  +G        F+  L S I  +  V    VP+++LI+F+ G +I
Sbjct: 129 GTVAALIDMLGAVIVASGRVLVHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLIGCII 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA  AE+GSMK+ EEID
Sbjct: 187 AQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMREEID 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G  +V W Y  +    F  R  
Sbjct: 247 ALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLR 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   GL+KAP MA  IGIVA  EG AV   + SLG+  T+ VV+ I  VI++D 
Sbjct: 307 DAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVIVMDG 366

Query: 363 LFAIFYFAIGI 373
           +FAIF+ A+G+
Sbjct: 367 VFAIFFAAVGM 377


>gi|325982943|ref|YP_004295345.1| hypothetical protein NAL212_2362 [Nitrosomonas sp. AL212]
 gi|325532462|gb|ADZ27183.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212]
          Length = 370

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 176/372 (47%), Gaps = 11/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +++G       G++    +  +   +   +++  ++ +   DL+ I +IDT G  L+   
Sbjct: 9   TKDGSPHIILTGDYTLATLESLLKPLEDELSREARNQNLYWDLTGIGQIDTAGTILLWRV 68

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            +          +    E++F  +             Q    +         +GK ++  
Sbjct: 69  WKTKRPDRLQ--LRPEHEKMFQRLERLPTH-------QSGIKHRDLLWPITTLGKLVLVL 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              S     ++G ++ +                 +   +Y  G   + +  L+ F+ G V
Sbjct: 120 WQHSVGLITLIGQLMLDVIYLIRHPVYIP--WREISANLYRTGAQALGITALVGFLIGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   + QL  FGA+IF I+++ I  +RE+G +L A+++AGRSGSA+ A++G M++ +E+
Sbjct: 178 LSYLSSKQLQLFGADIFIINILGISIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTQEL 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+   + LI P++  L I++PLL +  +  A++G  +       + +  F +  
Sbjct: 238 DALTVMGISHSQRLILPKVLGLGIAMPLLVMWTSAVALLGGMVAAEIQLGLHYHYFITAL 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             +  + N++ GL K       I ++A   G  +  ++ SLG+  T  VV +I++VIIID
Sbjct: 298 PDSVPVGNLWLGLGKGIVCGMVIALIACHFGLKIKPNTESLGEGTTASVVTAITMVIIID 357

Query: 362 SLFAIFYFAIGI 373
           ++FA+ +  +G+
Sbjct: 358 AIFAVLFSDVGL 369


>gi|39937298|ref|NP_949574.1| hypothetical protein RPA4238 [Rhodopseudomonas palustris CGA009]
 gi|39651156|emb|CAE29679.1| putative permease of ABC transporter [Rhodopseudomonas palustris
           CGA009]
          Length = 378

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      +  G W +     +         +   + S  +D++ I EIDTIGA ++   
Sbjct: 11  ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 70

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                +     + +G+ST   +L   +   +R+      P      N        IG+  
Sbjct: 71  SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 125

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                D      +LG + +            +  L SL  Q+Y VG   +P+++LI+F+ 
Sbjct: 126 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 183

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ 
Sbjct: 184 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 243

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF 
Sbjct: 244 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 303

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI
Sbjct: 304 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 363

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFA+F+ +IG+
Sbjct: 364 VLDGLFAVFFASIGM 378


>gi|319783795|ref|YP_004143271.1| hypothetical protein Mesci_4108 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169683|gb|ADV13221.1| protein of unknown function DUF140 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 395

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 147/369 (39%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+G+    F+G W +  ++ + D  +  I K     +  +D+S I ++DT GA LI   +
Sbjct: 28  EDGVLGCAFSGIWTTRTVA-LVDADMRKIEKRSGFKTLALDVSKIEKMDTAGAWLIDRLV 86

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +  K     +    E    L+        +  +       N        +G+++ +  
Sbjct: 87  SAFEKKGVEIQMQGQSEIASILLEAVGEAVRREPESGPVRPPNIVIRALEAVGRRVYEMR 146

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + GA++
Sbjct: 147 DDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIVGAIV 204

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ EE+D
Sbjct: 205 AQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMREEVD 264

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G  +  W Y DIP A F  R  
Sbjct: 265 ALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGILAAWLYSDIPPAAFIDRLR 324

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VII+D 
Sbjct: 325 VAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDG 384

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 385 LFAMFYAAI 393


>gi|148256837|ref|YP_001241422.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146409010|gb|ABQ37516.1| putative ABC transporter (permease protein) [Bradyrhizobium sp.
           BTAi1]
          Length = 377

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 196/371 (52%), Gaps = 5/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E      R  G W +P    +   V  A   + +     +D+S ++ +DT GA LI    
Sbjct: 12  EGSALSLRATGAWTAPFAPSLERLVADAEKLAGKKIDVSIDVSEVSRLDTFGAWLIERLR 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +        +        SL+    R       P       +   +   IG+ +    
Sbjct: 72  RSFTTGTAEARIDGLSANYASLVDEVRRVSA---APDGDATAVTITGMLGQIGRSVAGIF 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               +   +LG VI  +G        F+  L S I  +  V    VP+++LI+F+ G +I
Sbjct: 129 GTVAALIDMLGAVIVASGRVFIHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLIGCII 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA  AE+GSMK+ EEID
Sbjct: 187 AQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMREEID 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G  +V W Y  +    F  R  
Sbjct: 247 ALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLR 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              ++ +   GL+KAP MA  IGIVA  EG AV   + SLG+  T+ VV+ I  VI++D 
Sbjct: 307 EAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTSSVVKGIFFVIVMDG 366

Query: 363 LFAIFYFAIGI 373
           +FAIF+  +G+
Sbjct: 367 VFAIFFATVGM 377


>gi|192293078|ref|YP_001993683.1| hypothetical protein Rpal_4717 [Rhodopseudomonas palustris TIE-1]
 gi|192286827|gb|ACF03208.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           TIE-1]
          Length = 382

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++      +  G W +     +         +   + S  +D++ I EIDTIGA ++   
Sbjct: 15  ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 74

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                +     + +G+ST   +L   +   +R+      P      N        IG+  
Sbjct: 75  SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                D      +LG + +            +  L SL  Q+Y VG   +P+++LI+F+ 
Sbjct: 130 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA+IAQQG F   +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ 
Sbjct: 188 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF 
Sbjct: 248 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R H   +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI
Sbjct: 308 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 367

Query: 359 IIDSLFAIFYFAIGI 373
           ++D LFA+F+ +IG+
Sbjct: 368 VLDGLFAVFFASIGM 382


>gi|325923308|ref|ZP_08184981.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325546235|gb|EGD17416.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
          Length = 370

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 118/368 (32%), Positives = 189/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R AG+W        A+     + +++      +D   I ++D+ G   ++ F  +
Sbjct: 15  DHAQVRLAGSWVLATALPQAE-----LLQAVPDGIRRIDARGIAQLDSAGVLQLLRFASR 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K          + L   I   + ++ K +          F      +G+        
Sbjct: 70  MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQG 123

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +           +F+  L S +  M  VG+  VP+V+L+S++ GAVIA 
Sbjct: 124 ILELNSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EE+DAI
Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD + +L+ PR+ ALI +LPLLT +A  + + G   V     DIP  ++ +R H T
Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VII+D++ 
Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 362 ALWFMKMG 369


>gi|316935758|ref|YP_004110740.1| hypothetical protein Rpdx1_4456 [Rhodopseudomonas palustris DX-1]
 gi|315603472|gb|ADU46007.1| protein of unknown function DUF140 [Rhodopseudomonas palustris
           DX-1]
          Length = 382

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 134/371 (36%), Positives = 196/371 (52%), Gaps = 4/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +         G W +     +      A  +   + S  +D++AI EIDTIGA ++    
Sbjct: 16  DGDTLELEPTGAWTATNSKIMEQLSAGAAQQIASAKSLTIDMAAIGEIDTIGAWVLEKLS 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                           +    LI    +   +   P      N        IG+      
Sbjct: 76  RSAAEAGSPAQFKGIADSYAELIDEVRQLNRRGPTPH--PKPNPIIAKLDEIGRSAWSAT 133

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D      +LG +              +  L SL  Q+Y VG   +P+++LI+F+ GA+I
Sbjct: 134 ADIAVFLQMLGALGVAVLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAII 191

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA  AE+GSMK+ EEID
Sbjct: 192 AQQGIFHFRKFGADSYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEID 251

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TMGLD V +LI PRI AL+I+LP+L  + + +A+ G  +  W Y  +  +VF +R H
Sbjct: 252 ALSTMGLDPVEVLILPRIIALVIALPILAFIGSMAALYGGLLTAWFYGGMQPSVFIARLH 311

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              +L +   G+ KAPFMA  IGIVA  EG  V   + SLG + TT VV+SI +VI++D 
Sbjct: 312 EAVSLNSFQVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLDG 371

Query: 363 LFAIFYFAIGI 373
           LFA+F+ +IG+
Sbjct: 372 LFAVFFASIGM 382


>gi|70733612|ref|YP_257252.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68347911|gb|AAY95517.1| ABC transporter, permease protein, putative [Pseudomonas
           fluorescens Pf-5]
          Length = 382

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 5/367 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G+W     S++         +     S  +DL+ +  +DT GA L++  +    
Sbjct: 19  AQLRIGGDWTLAHYSDLKRLSQSLDGRY--DSSTHIDLNGLGALDTAGASLLVELLGAER 76

Query: 67  GKIKLQGVS-THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                +    T      +L+   +        P +    +    L   IG  +     D+
Sbjct: 77  LGQSAEHPDCTLSAADRALLHTVYTSLNDFCVPVKEPEISVSVQLLSRIGSAVYTVWQDT 136

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +GL++           +++     ++  +   G+   P+V L++F+ GAV+A  
Sbjct: 137 LKVLGFIGLILETLARGLLRPKRWRI--TPVVAHIEQTGLDAAPIVALLTFLVGAVVAFL 194

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           GA  L+ FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDAIR
Sbjct: 195 GATVLANFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIR 254

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+GLD V +L+ PR+ AL++SLP+LT LA  S I+G ++V     DI  A+F S  HS  
Sbjct: 255 TLGLDPVELLVLPRVLALLVSLPMLTFLAMLSGIVGGAVVCALSLDISPAMFLSLLHSDI 314

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GL+KAP  A  I  +   EGF V   + S+G   T+ VVQSI +VI+ID++ A
Sbjct: 315 GVKHFLLGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVIDAVAA 374

Query: 366 IFYFAIG 372
           +F+  +G
Sbjct: 375 LFFMEMG 381


>gi|307297001|ref|ZP_07576817.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum
           L-1]
 gi|306877527|gb|EFN08755.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum
           L-1]
          Length = 376

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 114/370 (30%), Positives = 195/370 (52%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G TV R +GN     + ++ + +       I+     +DLS +  +DTIGA ++   +
Sbjct: 19  REGRTVIRLSGNLSIACLHDLPNRLDA-----IEGPVDTIDLSGVDHMDTIGAWVLHRTI 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K  + G     E+L + +              R      ++ +   IG+ +V   
Sbjct: 74  KRLDCK--ITGDKCDAERLITTVGSVDE-----PVNIRPDHEPPWQRVVGQIGEAVVNSG 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G  +  T        +F+    +++++   VGVS + ++ L+SF+ G VI
Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFRIN--AVVQRFEVVGVSALGIIGLMSFLIGIVI 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+D
Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PR  A+++ +PLL+  A+  AIIG   +     DIP   F  R  
Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLSFYASIVAIIGGGFLCAVSLDIPPITFVQRLR 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI++D+
Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVLDA 364

Query: 363 LFAIFYFAIG 372
            FA+F+  +G
Sbjct: 365 FFAVFFTWVG 374


>gi|217969575|ref|YP_002354809.1| hypothetical protein Tmz1t_1154 [Thauera sp. MZ1T]
 gi|217506902|gb|ACK53913.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 385

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 113/373 (30%), Positives = 197/373 (52%), Gaps = 5/373 (1%)

Query: 1   MSENGIT-VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           ++ +G+  V R  G+W     + +         +     +  V+L+ +  +DT GA L+ 
Sbjct: 16  LAGDGVAAVLRLRGDWTLAHHAALRRQADAL--RGRIDAATRVELAELGTLDTAGARLLH 73

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +        L        +  +L+          ++   +    +  ++  HIG  ++
Sbjct: 74  GLLGGERVAALLADEGALSRERRALLKAVADAIEGREERPAADEGYALGDVLAHIGHTML 133

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     +    +GL++           +++    +L+  +   G+  VP++ L++F+ G
Sbjct: 134 VFWRHVSALTGFIGLILETALRVSVQPRRWRV--TALVANLERTGLDAVPIIALLTFLVG 191

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L  FGA IF++DL++   LRE GVLLTA+++AGR+ S+  A+IGSM+ NE
Sbjct: 192 AVVAFLGATVLQNFGASIFTVDLVAYSFLREFGVLLTAIIVAGRTASSFTAQIGSMRANE 251

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDAIR +GLD V +L+ PR++AL+++LP+LT +A  + I+G  +V     DI   +F S
Sbjct: 252 EIDAIRVLGLDPVELLVLPRVYALLVALPILTFVAMIAGIVGGMLVSAMTLDISPVLFLS 311

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R      L + + G+ KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI+
Sbjct: 312 RIEDNVGLIHFWVGMAKAPIFAFLIAVIGCLEGFRVQGSAQSVGEHTTSAVVQSIFVVIV 371

Query: 360 IDSLFAIFYFAIG 372
           +D++ A+F   +G
Sbjct: 372 VDAIAALFCMEMG 384


>gi|330806719|ref|YP_004351181.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327374827|gb|AEA66177.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 382

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 116/363 (31%), Positives = 193/363 (53%), Gaps = 7/363 (1%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHGK 68
             G+W     +++   +  ++      ++  +DL+ +  +DT GA L++  +  E+    
Sbjct: 23  VGGDWTLAHYAQL-KRLSESLRGQYDENTL-IDLNGLGALDTAGASLLVELLGSERLGKT 80

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +    S    +  +L+   +        P +         L   IG+ + K   D+   
Sbjct: 81  TEHPDCSLPAAE-RALLQTVYCSLTDFCVPVKEPQVGVLTQLLTRIGRAVEKVWQDTLQL 139

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL++           +++     ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 140 LGFVGLILETLARNLLRPRRWRM--TPMVVHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 197

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 198 VLADFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 257

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD V +L+ PR+ AL+++LP+LT LA  S IIG  +V      I  A+F +   S   + 
Sbjct: 258 LDPVELLVIPRVLALLVALPMLTFLAMLSGIIGGGVVCALSLGISPAMFLTLLQSDIGVQ 317

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G++KAP  A  I  V   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+
Sbjct: 318 HFLVGMVKAPIFAFLIAAVGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFF 377

Query: 369 FAI 371
             +
Sbjct: 378 MEM 380


>gi|313496513|gb|ADR57879.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 374

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 7/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +     ++      A  DLS +  +DT GA L+   +      
Sbjct: 17  LRITGDWTLAHYASLKRESERLRSQCPADTVA--DLSQLGRLDTAGASLLAELLGSERLS 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +    + L       +        P +    N    L   IG+ +     DS   
Sbjct: 75  RCTHALPEASQALL---KNVYCSVQDYCIPVKEPERNVLLLLLERIGRAVGTLWQDSMQL 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 132 LGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 190 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   + 
Sbjct: 250 LNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGVQ 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+
Sbjct: 310 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 369

Query: 369 FAIG 372
             +G
Sbjct: 370 MEMG 373


>gi|148545417|ref|YP_001265519.1| hypothetical protein Pput_0160 [Pseudomonas putida F1]
 gi|148509475|gb|ABQ76335.1| protein of unknown function DUF140 [Pseudomonas putida F1]
          Length = 377

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 188/364 (51%), Gaps = 7/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W     + +  +      ++  + + I DLS +  +DT GA L+   +      
Sbjct: 20  LRITGDWTLAHYANLKRESERL--RTQCAANTIADLSQLGRLDTAGASLLAELLGSERLS 77

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +    + L       +        P +    N    L   IG  +     DS   
Sbjct: 78  RCTHALPEASQALL---KNVYCSVQDYCIPVKEPERNVLLLLLERIGCAVGTLWQDSMQL 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 135 LGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 193 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL+ISLPLLT +A    I+G ++V     DI  A+F S   S   + 
Sbjct: 253 LNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGVQ 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+
Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 372

Query: 369 FAIG 372
             +G
Sbjct: 373 MEMG 376


>gi|114570554|ref|YP_757234.1| hypothetical protein Mmar10_2004 [Maricaulis maris MCS10]
 gi|114341016|gb|ABI66296.1| protein of unknown function DUF140 [Maricaulis maris MCS10]
          Length = 384

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 118/371 (31%), Positives = 185/371 (49%), Gaps = 5/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E   T+    G+W    I    D+ + A+  S    S +VD+S +  +DT GA L+    
Sbjct: 19  EGERTILEPHGDWVIDTIGR-HDNAIRAVEASADPCSIVVDVSHLGRVDTAGAYLLGRAT 77

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            K                +  LI     +       +   F   F      +G  I    
Sbjct: 78  RKCPTPDADFHFVGQHRTVRRLIEEVRMRTQVCGPDEVPTF--GFIKALARLGAGIEVAY 135

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            ++       G  ++         ++F+  L   +  M  VGV+ +P+V  ++F  GAV+
Sbjct: 136 QEAVDTFAFFGKTLTTGLSCFIQPWRFR--LTPTVWAMEEVGVNALPIVATLTFFIGAVV 193

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L  FGA +F++DL+ +  LRE GVL+TA+M+A RS SA  A IG+MK+ +EID
Sbjct: 194 AYMGATLLQSFGASVFTVDLVGLAVLREFGVLITAIMLAARSDSAFTASIGAMKMQQEID 253

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +GLD    L+ PR+ A ++  PLLT  A  + I G  +V W   DI  A+FF+R H
Sbjct: 254 AMRVLGLDPYEALVLPRVVACVLMAPLLTFGAMVAGIFGGMLVAWTAQDISPALFFTRLH 313

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S   +++ + G+ KAP     + I+  ++G  V     SLG++VT  VVQSI  +I++++
Sbjct: 314 SEIDISHFWVGMSKAPVFGMVVAIIGCRQGMQVQGDVESLGRRVTASVVQSIFAIIVLEA 373

Query: 363 LFAIFYFAIGI 373
           LFA+ Y  + I
Sbjct: 374 LFAMMYLELEI 384


>gi|13470959|ref|NP_102528.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14021702|dbj|BAB48314.1| permease of ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 395

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 149/369 (40%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G+    F+G W +  ++ + D  +  I K     +  +DLS I +IDT GA LI   +
Sbjct: 28  EAGVLGCAFSGIWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRLV 86

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +  K     +    E    L+        +  +   +   N        +G+++ +  
Sbjct: 87  SAFEKKNVEVRLQGQSEIASILLDAVGEAVRREPESGPARPPNIIIRALEAVGRRVYEMR 146

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + GA++
Sbjct: 147 DDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIVGAIV 204

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ EE+D
Sbjct: 205 AQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMREEVD 264

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G  +  W Y DIP A F  R  
Sbjct: 265 ALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFIDRLR 324

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VII+D 
Sbjct: 325 VAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDG 384

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 385 LFAMFYAAI 393


>gi|78777725|ref|YP_394040.1| hypothetical protein Suden_1528 [Sulfurimonas denitrificans DSM
           1251]
 gi|78498265|gb|ABB44805.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 373

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 188/371 (50%), Gaps = 8/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +     +F G      + +   ++        + ++ ++DL  ++ +D+ G+  +    
Sbjct: 11  SDNKLSLKFKGELTLYNLMKYKKEIDKIAFS--KENAVVIDLLELSFLDSAGSIFLNNLQ 68

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     ++ H   +  ++     +KI      +       +N    IG+K  K  
Sbjct: 69  KELELKELKVDITCHNRDVLDMLELIRVQKITL----KKIAKKKKRNRVEKIGEKSYKAY 124

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               S    +G + S+   +  S    +     +  +M    +  + ++ L SF+ G V+
Sbjct: 125 LGILSFMAFMGELFSHKLRYLISFKNIRH--KEIAFEMNECAIKALGIISLTSFLIGVVV 182

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q A+QL  +GA IF +D++ +  LRE+  L+TA++IAGRSGSA  A+IG+MKI +E+D
Sbjct: 183 AYQSAYQLKLYGANIFIVDMLGLSILRELSPLITAIVIAGRSGSAFTAQIGAMKITQELD 242

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG D  R L+ P+I AL+I++PLL  +++  AIIG  IV     +I   +F  RF+
Sbjct: 243 AMQTMGFDPYRFLVVPKIIALMITMPLLIFVSDIMAIIGGMIVANLDLNITVDMFLDRFN 302

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +   G+ K PF A  I  +A+ +G  V   + S+G   T  VV+SI  VII D+
Sbjct: 303 EVINIKHFIVGISKGPFFAFLIATIAIYQGLLVKDDTQSIGLNTTKSVVESIFAVIICDA 362

Query: 363 LFAIFYFAIGI 373
           +F+I +  +GI
Sbjct: 363 IFSIAFTNLGI 373


>gi|254502466|ref|ZP_05114617.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222438537|gb|EEE45216.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 382

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 131/371 (35%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G      +G+W    +++    +        +     +D+S +  +DT GA LI    
Sbjct: 18  SEGHQSLILSGDWTVSTLADADQQISKL--NVAKDKLTCIDVSEVDHLDTSGAWLIHRTR 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +     +   ++       SL     +      +P RS F  +        G+++V+  
Sbjct: 76  GQLEFSGRKVQLTGVTPVRESLFHEIEKHHPPRWQPDRSGF--TIVGFLEATGRQMVEVY 133

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D+ +  HILG +            + +    ++  Q     +  VP+V L+SF+ GA+I
Sbjct: 134 KDTLAMLHILGSLGIVLSTVLLQPKRLRSI--AIAVQFDRSCIGAVPIVALMSFLIGAII 191

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +QQG F L QFGA+IF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+G+M++ EE+D
Sbjct: 192 SQQGGFYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVD 251

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL    +L+ PRI AL+I+LP+LT +A+ SA+ GA ++ W Y DIP A F ++  
Sbjct: 252 ALHVIGLSVTEVLVLPRILALMIALPILTFVADISALFGAGLITWAYLDIPPAAFLTQLQ 311

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S  T+     G+IKAPFMA  +G++A  EG  V   S SLG+  T  VV++I +VI++D 
Sbjct: 312 SAITVNTFVVGIIKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMAVVKAIFLVIVVDG 371

Query: 363 LFAIFYFAIGI 373
           +FA+F+ AIG+
Sbjct: 372 MFAMFFAAIGV 382


>gi|171322064|ref|ZP_02910936.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
 gi|171092626|gb|EDT37930.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
          Length = 427

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +   
Sbjct: 72  TVRLYGQWTALALARNRGAVARRVAGIATGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 131

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                 +S     +F  I             + +             G  +  F      
Sbjct: 132 DG--VALSPTQRTIFERIERLDS-------QREAPERVVHFGPITRFGFMLFAFAEHLQG 182

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 183 GIAMFGLVILDALSVLRRPNTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 240

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 241 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 300

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 301 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 360

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 361 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 420

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 421 FQNVGL 426


>gi|104779408|ref|YP_605906.1| ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108395|emb|CAK13089.1| putative ABC transporter, permease protein [Pseudomonas entomophila
           L48]
          Length = 374

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 118/366 (32%), Positives = 188/366 (51%), Gaps = 7/366 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           T    AG+W     + +  +     ++    D   VDLS +  +DT GA L+   +    
Sbjct: 15  TRLHIAGDWTLAHYASLKRECERLGSQY--GDDTQVDLSQLGRLDTAGASLLAELLGSER 72

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
                  +      L       +        P +         L   IG+ + +   D+ 
Sbjct: 73  LSHCTDDLPDASRALL---KNVYCSVQDYCIPVKQPEQPVLLLLLARIGRAVDQLWQDTR 129

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +GL++          ++++     ++  +   G+   P+V L++F+ GAV+A  G
Sbjct: 130 QVLGFIGLILETLLLRLFQPHRWRV--TPVVAHLEQTGLDAAPIVALLTFLVGAVVAFLG 187

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA IF++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT
Sbjct: 188 ATVLAAFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRT 247

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ + +L+ PR+ AL+I+LPLLT LA    ++G ++V     DI  A+F S   S   
Sbjct: 248 LGLNPIELLVVPRVLALLIALPLLTFLAMLCGLVGGAVVCALTLDISPAMFLSLLQSDIG 307

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+
Sbjct: 308 VQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAAL 367

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 368 FFMEMG 373


>gi|296284592|ref|ZP_06862590.1| putative ABC transport system permease protein [Citromicrobium
           bathyomarinum JL354]
          Length = 370

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 116/370 (31%), Positives = 191/370 (51%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G TV R  G +    I+ +   +    +     D A      ++EIDT+GA       
Sbjct: 13  DGGRTVLRLKGPYLLSTIANVDRGLRKLDDDIDVIDLA-----EVSEIDTVGAWFACTLA 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +   I+    S   ++L + +  +      +     +            +G+K+ +  
Sbjct: 68  RNHSASIE--NASERADRLLTAVGESANSSDVS-----APRLPLLTRAPEAMGEKVFEAG 120

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               S     G +++          +F+    +++ Q   VGV+ +P++ L+SF+ G VI
Sbjct: 121 RGIVSVVGFFGQILAGAASLIRHPRRFRH--RAMVHQFESVGVNALPIIGLMSFLIGIVI 178

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGA QL  FGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A+IG+MK+ EEID
Sbjct: 179 AQQGAVQLQAFGAEALTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEID 238

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  V +L+ PR+ A +  + LL   A+  AIIG ++V      IPF  F  R H
Sbjct: 239 AMRTIGISPVEVLVIPRLVACVFMMILLGFYASCMAIIGGAVVSDVMLGIPFWTFLMRIH 298

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +++ G+IKAP     +G+    +G  V  +S  +G + T  VVQ+I  VI++D+
Sbjct: 299 EVVPAHDVWVGMIKAPVFGLIVGMSGCYQGMQVRGNSEEVGLRTTKAVVQAIFTVIVLDA 358

Query: 363 LFAIFYFAIG 372
            FA+F+  IG
Sbjct: 359 FFAVFFTGIG 368


>gi|325273982|ref|ZP_08140141.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51]
 gi|324100871|gb|EGB98558.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51]
          Length = 374

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 7/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R AG+W     + +  D      +      A  DLS +  +DT GA L+   +      
Sbjct: 17  LRIAGDWTLAHYASLKRDSERLRAQYTPDTVA--DLSQLGRLDTAGASLLAELLGTERLS 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +      L       ++       P +    N    L   IG  +     DS   
Sbjct: 75  RCTHDLPEASRALL---KNVYQSVQDYCIPVKEPERNVLLLLLERIGCAVGTLWQDSMQL 131

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G+++          ++++     ++  +   G+   P+V L++F+ GAV+A  GA 
Sbjct: 132 LGFIGVILETLLRRALQPHRWRI--TPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 189

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA +F++DL++   LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIRT+G
Sbjct: 190 VLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 249

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ + +L+ PR+ AL+I+LPLLT +A    I+G ++V      I  A+F S   S   + 
Sbjct: 250 LNPMELLVVPRVLALLITLPLLTFVAMLCGIVGGAVVCALSLGISPAMFLSLLQSDIGVQ 309

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   GL KAPF A  I  +   EGF V   + S+G   T+ VVQSI +VI++D++ A+F+
Sbjct: 310 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 369

Query: 369 FAIG 372
             +G
Sbjct: 370 MEMG 373


>gi|299068161|emb|CBJ39380.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum CMR15]
          Length = 374

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++  + +    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRTGLNTANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +L        ++   ++                      N    +G  ++ F 
Sbjct: 75  GNRWP--ELLDARPDQRRMIDRVARLD-------PGGWKKRIAPRINPVAVLGNAMLDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 EHLRIGVAMVGQLVFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I + A   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALAACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|332187454|ref|ZP_08389192.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17]
 gi|332012615|gb|EGI54682.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17]
          Length = 368

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 112/364 (30%), Positives = 186/364 (51%), Gaps = 14/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            RF GN     + ++ + +              +DLS +  IDT+GA L+  F  +    
Sbjct: 17  LRFTGNLSLATLGDLPERLDREEASVQ-----RIDLSQVDRIDTVGAWLVHRFAARNDAA 71

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           I+  G+  +   L   +    +      +P      + F  +   +G  ++         
Sbjct: 72  IE--GLDENQRNLVDKVVEADQPVAMRPQP-----ISPFARVAGEVGDAVITAFKTLYGL 124

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  +           +F+    +++ +   VGVS + ++ L+SF+ G VIAQQGA 
Sbjct: 125 LGFMGATVIAGFAVLRHPRRFR--FNAVVHEFETVGVSALAIIGLMSFLIGIVIAQQGAV 182

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAE+F+I+L+  L LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EEIDA+R +G
Sbjct: 183 QLRQFGAEVFTINLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEIDAMRVIG 242

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  A +  +PLL   ++  A+IG   +      IP   F +R      + 
Sbjct: 243 VSPMEALVLPRTIAAVTLMPLLGFYSSLIAMIGGCFLAAVSLGIPPVTFIARIREVVPIT 302

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +++ GLIKAP     I I    +G  V   +  +G + T  VVQ+I +VI++D+ FA+F+
Sbjct: 303 DLYVGLIKAPVFGAIIAIAGCFQGMQVKSDAEQVGLRTTAAVVQAIFLVIVLDAFFAVFF 362

Query: 369 FAIG 372
             +G
Sbjct: 363 TWLG 366


>gi|313682999|ref|YP_004060737.1| hypothetical protein Sulku_1877 [Sulfuricurvum kujiense DSM 16994]
 gi|313155859|gb|ADR34537.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM
           16994]
          Length = 373

 Score =  262 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 109/371 (29%), Positives = 178/371 (47%), Gaps = 18/371 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           +       +G+W    +S+ A ++   I  S+       D+S ITEID+ G  L      
Sbjct: 16  DAHMQILCSGSWTIEHLSDAARELEALIPLSL----VTWDMSGITEIDSSGIALWQLTNR 71

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             E+     +       + +LF L+           KP R     +  +  Y +GK+  +
Sbjct: 72  TFEERGHTCETVNEREDLSRLFRLL---------YSKPFRDVPIPAVPSSLYRLGKETYE 122

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                 +    LG                +    S+   +   G   +P++ L +F+ G 
Sbjct: 123 IFRGIGTFLAFLGEAFILFFYTLRHPRLIRY--RSIGVHILETGARALPIIALSAFLIGV 180

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q   QL +FGA+IF +D++ I   RE+  L+TA+++AGRSGSA  A+IG+MK+ +E
Sbjct: 181 VVAYQSVVQLQKFGADIFIVDMIGISLTRELAPLITAIVVAGRSGSAFTAQIGTMKMTQE 240

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RTMG D    L+ PR+ AL+I +PLL   A+   I G  ++   +  + F+ F  R
Sbjct: 241 IDAMRTMGFDPFTFLVWPRVIALMIIMPLLIFFADMVGIFGGMVIAQVHSHLSFSEFIHR 300

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L +   GLIK PF A  I  V+   GF V +++ S+G+  T  VV +I +VI  
Sbjct: 301 LQGALALKHYLIGLIKGPFFAFLIAFVSTYRGFQVSMNTESIGQYTTKSVVNAIFLVIAC 360

Query: 361 DSLFAIFYFAI 371
           D++F++    +
Sbjct: 361 DAIFSVLLTEL 371


>gi|238759499|ref|ZP_04620662.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236]
 gi|238702274|gb|EEP94828.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236]
          Length = 381

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 116/364 (31%), Positives = 183/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G W       +   V     +     SA+ D S +  +DT GA L+   + +    
Sbjct: 21  VYIRGEWVLAHYRFLEPKVAQL--RVDLPASAMFDFSQLGGLDTAGATLLATLLGELRVS 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      ++   L+    +                +  L   IG+ +     D  S 
Sbjct: 79  NLRELAPRLPDERRVLLETVSQVLPNLVPQLTVKPQPFWIGLLVPIGQSVDNLWQDFKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFVGLTLEALLGTVFRPARWRV--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F +   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLTIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HLLVGISKAPIFAFLIAIIGCLEGFKVSGSAESVGMHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|254247077|ref|ZP_04940398.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184]
 gi|124871853|gb|EAY63569.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184]
          Length = 425

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +   
Sbjct: 70  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 129

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 130 AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 180

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 181 GIAMFGRVILDALSVLRRPKTMP--WKEISANIYSAGAQALPITALVAFLIGIVLSYLSA 238

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 239 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 298

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 299 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 358

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 419 FQNVGL 424


>gi|17545032|ref|NP_518434.1| hypothetical protein RSc0313 [Ralstonia solanacearum GMI1000]
 gi|17427322|emb|CAD13841.1| putative abc-type transport system involved in resistance to
           organic solvents, permease component abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 374

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++  + +    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLNTANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +L        ++   ++                      N    +G  ++ F 
Sbjct: 75  GNRWP--ELLDARPDQRRMIDRVARLD-------PGGWKKRIAPRINPVTVLGNAMLDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 RHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALGGGILAARFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I + A   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALTACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|239813318|ref|YP_002942228.1| hypothetical protein Vapar_0299 [Variovorax paradoxus S110]
 gi|239799895|gb|ACS16962.1| protein of unknown function DUF140 [Variovorax paradoxus S110]
          Length = 388

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 181/372 (48%), Gaps = 13/372 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++G +    +G W +  +S       +   +  +  +D    DL  I ++D IGA+L+  
Sbjct: 25  QDGRSWTVASGRWTTLAMSSRSAWQALSKDLAGAPPADGRAWDLRPIEQLDHIGAQLLWD 84

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                        +S   + +   ++       +   P  +     F     H G + ++
Sbjct: 85  HWRHRWPATLE--LSPQHKAVLDQVAQFTVGTPEEPPPTLAERLRHF----SHTGARGLE 138

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D      ++G +  +      + +  +G        +Y  G + + +  L+  + G 
Sbjct: 139 VARD---FVGLIGQLALDACTLLRAPH--RGPWRDFSGHLYQFGATALHITALVGLLIGV 193

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A   + QL Q+GAE F ++++ +  +RE+G +L AV+IAGRSGSAI A+IG M++ EE
Sbjct: 194 VLAYLISQQLRQYGAEAFVVNILGLSLIRELGPVLAAVLIAGRSGSAITAQIGVMRVTEE 253

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     L+ PR+ AL I++PL+++  + +A++G  +      DI  A F S 
Sbjct: 254 LDAMRVMGIPHGFRLVMPRVMALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFLSA 313

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 ++N++  L K+      I ++    G  V  ++ SLG+  T+ VV SI+ VI++
Sbjct: 314 LPRAVPISNLWLALAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVILV 373

Query: 361 DSLFAIFYFAIG 372
           D+LFA+ +  +G
Sbjct: 374 DALFAVLFKGVG 385


>gi|116051201|ref|YP_789968.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218890596|ref|YP_002439460.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254236173|ref|ZP_04929496.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719]
 gi|254241899|ref|ZP_04935221.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192]
 gi|115586422|gb|ABJ12437.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168104|gb|EAZ53615.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719]
 gi|126195277|gb|EAZ59340.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192]
 gi|218770819|emb|CAW26584.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 381

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 114/366 (31%), Positives = 185/366 (50%), Gaps = 4/366 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G+W     + +  +V     +S  + +A  DLS +  +DT GA L+   +    
Sbjct: 19  ARVRAIGDWTLAHYTALEREVTRL--RSEVAGNASFDLSQLGALDTAGAALLAELLGAER 76

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
                +       +  +L+           +P++     +   L   IG  +  F     
Sbjct: 77  LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 136

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +GL +            ++     L+  +   G+  VP++ L++F+ GAVIA  G
Sbjct: 137 ALLGFIGLTLETLFRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 194

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR 
Sbjct: 195 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 254

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       
Sbjct: 255 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIG 314

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+
Sbjct: 315 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 374

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 375 FFMEMG 380


>gi|260752530|ref|YP_003225423.1| hypothetical protein Za10_0287 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856391|ref|YP_162753.2| hypothetical protein ZMO1018 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258551893|gb|ACV74839.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775390|gb|AAV89642.2| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 366

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 122/364 (33%), Positives = 187/364 (51%), Gaps = 15/364 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G      +  +++ +         SD  ++DLS +  +DT GA L+    +  + +
Sbjct: 16  LALQGVLTLAHLDSLSNTL------QTLSDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           +K  G ++ +  +   IS   R      K       +        +GK  V         
Sbjct: 70  VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G ++ +         + +  L ++I QM  VGV+ + +V L+S + G VIAQQGA 
Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAEI+SI+L+  L  RE+GVL+TA+M+AGRSGSA  A+IGSM + EEIDA+R +G
Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  A II +PLL   A  +A+IG  ++ W   DIP   FF+R        
Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL+KAP     I I    +G  V  ++  LG   T  VV SI +VI++D+ FA+F+
Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360

Query: 369 FAIG 372
             IG
Sbjct: 361 SEIG 364


>gi|260463968|ref|ZP_05812164.1| protein of unknown function DUF140 [Mesorhizobium opportunistum
           WSM2075]
 gi|259030343|gb|EEW31623.1| protein of unknown function DUF140 [Mesorhizobium opportunistum
           WSM2075]
          Length = 395

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 149/369 (40%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G+    F+G W +  ++ + D  +  I K     +  +DLS I +IDT GA LI   +
Sbjct: 28  EGGVLGCAFSGVWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRLV 86

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +  K     +    E    L+        +  +   +   N        +G+++ +  
Sbjct: 87  SVFEKKNVEVQLQGRSEIASILLDAVGEAVRREPESGPARPPNIVLRALEAVGRRVYEMR 146

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +D  +  +ILG  I          +       ++  Q+  +GV  +PVV+L+S + GA++
Sbjct: 147 DDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIVGAIV 204

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ EE+D
Sbjct: 205 AQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMREEVD 264

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G     W Y DIP A F  R  
Sbjct: 265 ALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIAAAWLYSDIPPAAFLDRLR 324

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L+ IF GLIKAPFMA  IG +A  EG  VG  + SLG+ VT  VV+SI +VII+D 
Sbjct: 325 VAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDG 384

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 385 LFAMFYAAI 393


>gi|83748501|ref|ZP_00945522.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|207742154|ref|YP_002258546.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|83724805|gb|EAP71962.1| ABC transporter permease protein [Ralstonia solanacearum UW551]
 gi|206593542|emb|CAQ60469.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
          Length = 374

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 176/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +         ++   ++                      N    +G  ++ F 
Sbjct: 75  GNRWP--EHLDARADQRRMIDRVARLD-------PGGWKKRIAPRINPVTVLGGAMIDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +       ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|103485974|ref|YP_615535.1| hypothetical protein Sala_0481 [Sphingopyxis alaskensis RB2256]
 gi|98976051|gb|ABF52202.1| protein of unknown function DUF140 [Sphingopyxis alaskensis RB2256]
          Length = 368

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 112/368 (30%), Positives = 191/368 (51%), Gaps = 15/368 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                RF G      + ++   +            A +DLSAI  IDT+GA ++      
Sbjct: 14  DGVEVRFTGRLTLARLGDLPARLDAL------GPIATLDLSAIDRIDTVGAWIVTRTAAD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           +  +  + G S   ++L   ++       K++         ++  +   IG   V   N+
Sbjct: 68  HDAR--ITGASADAQRLLDALAS-----DKSEYRVHRDRRPAWVRMLEQIGTASVAVWNE 120

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G +I        +  + +    +++ +   VGV  +P++ L+SF+ G VIAQ
Sbjct: 121 LLGIVGFFGAMIVAIFNQIRARRRLR--WNAIVTRFQTVGVDALPIIGLMSFLIGIVIAQ 178

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QGA QL QFG E+F+I+L+    +RE+G+L+TA+M+AGRSGSA  A+IG+MK+ EE+DA+
Sbjct: 179 QGAVQLEQFGLEVFTINLVGRASIRELGLLMTAIMVAGRSGSAFAAQIGTMKLTEEVDAM 238

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+G+  +  ++ PR+ A  I++PLL   A+  AI G  +  W   DIP   +  R    
Sbjct: 239 RTIGVSPMEAIVLPRVAASTITMPLLGFYASLCAIAGGGLFCWVGLDIPPLTYIQRLREI 298

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + + +  LIKAP     IG+    EG  V  ++  +G++ T+ VV +I +VI++D+ F
Sbjct: 299 IPMTDFWIMLIKAPVFGILIGVTGCYEGMQVRQNAEEVGQRTTSAVVAAIFLVIVLDAFF 358

Query: 365 AIFYFAIG 372
           A+F+ ++G
Sbjct: 359 AVFFSSLG 366


>gi|327478710|gb|AEA82020.1| ABC transporter permease [Pseudomonas stutzeri DSM 4166]
          Length = 385

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 111/363 (30%), Positives = 188/363 (51%), Gaps = 5/363 (1%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G+W     + +  +V     ++   + + ++LS +  +DT GA L++  +       
Sbjct: 27  RIVGDWTLAHYAALRREVQRL--RARIDERSQIELSGLGALDTAGAGLLVELLGPERIAA 84

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
                     +  +L+       +       S     F  +  HIG+ +        +  
Sbjct: 85  IEAWAPQLPAERLALLRTVATA-LDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQRALL 143

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             +GL +           +++  L SL   +   G+  VP+V L++F+ GAV+A  GA  
Sbjct: 144 GFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFLGATV 201

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+ FGA I++++L+    LRE GVLL A+++AGRS SA  A+IGSMK NEE+DAIRT+GL
Sbjct: 202 LADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEVDAIRTLGL 261

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
             + +L+ PR+ A++I+LP+LT +   S I G  +V     DI   +FF+       +++
Sbjct: 262 SPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDIAVSH 321

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GL KAP  A  I ++   EGF V   + S+G+  T+ VVQ+I +VI++D++ A+F+ 
Sbjct: 322 FLVGLGKAPVFAFVIAVIGCLEGFKVSGSAQSVGEHTTSSVVQAIFMVILLDAIAALFFM 381

Query: 370 AIG 372
            +G
Sbjct: 382 EMG 384


>gi|241761770|ref|ZP_04759856.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373684|gb|EER63244.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 366

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 123/364 (33%), Positives = 188/364 (51%), Gaps = 15/364 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G      +  +++ + M       SD  ++DLS +  +DT GA L+    +  + +
Sbjct: 16  LALQGVLTLAHLDSLSNTLQML------SDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
           +K  G ++ +  +   IS   R      K       +        +GK  V         
Sbjct: 70  VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G ++ +         + +  L ++I QM  VGV+ + +V L+S + G VIAQQGA 
Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL QFGAEI+SI+L+  L  RE+GVL+TA+M+AGRSGSA  A+IGSM + EEIDA+R +G
Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  A II +PLL   A  +A+IG  ++ W   DIP   FF+R        
Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL+KAP     I I    +G  V  ++  LG   T  VV SI +VI++D+ FA+F+
Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360

Query: 369 FAIG 372
             IG
Sbjct: 361 SEIG 364


>gi|152984282|ref|YP_001347296.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959440|gb|ABR81465.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 381

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 114/366 (31%), Positives = 184/366 (50%), Gaps = 4/366 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G+W     + +  +V     +S  +  A  DLS +  +DT GA L+   +    
Sbjct: 19  ARVRAIGDWTLAHYTALEREVTRL--RSQVAGDASFDLSQLGALDTAGAALLAELLGAER 76

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
                +       +  +L+           +P++     +   L   IG  +  F     
Sbjct: 77  LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 136

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +GL +            ++     L+  +   G+  VP++ L++F+ GAVIA  G
Sbjct: 137 ALLGFIGLTLETLLRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 194

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR 
Sbjct: 195 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 254

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       
Sbjct: 255 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWSLDIPPAMFLSIMEDGIG 314

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+
Sbjct: 315 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 374

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 375 FFMEMG 380


>gi|294010007|ref|YP_003543467.1| ABC-type transport system permease component LinK [Sphingobium
           japonicum UT26S]
 gi|292673337|dbj|BAI94855.1| ABC-type transport system permease component LinK [Sphingobium
           japonicum UT26S]
          Length = 376

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 114/370 (30%), Positives = 193/370 (52%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G TV R +GN     + ++ D +       I+     +DLS +  +DTIGA ++   +
Sbjct: 19  REGRTVIRLSGNLSIACLHDLPDRLDA-----IEGPVDTIDLSDVGHMDTIGAWVLHRAI 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++      + G     E+L + +              R      ++ +   IG+ +V   
Sbjct: 74  KRLDCG--ITGDKCDAERLIATVGSVDE-----PVNIRPDHEPPWQRVVGQIGEAVVNSG 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G  +  T        +F+    +++++   VGVS + ++ L+SF+ G VI
Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFRIN--AVVQRFEVVGVSALGIIGLMSFLIGIVI 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+D
Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PR  A+++ +PLL   ++  AIIG   +     DIP   F  R  
Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVSLDIPPITFVQRLR 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI+ID+
Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 364

Query: 363 LFAIFYFAIG 372
            FA+F+  +G
Sbjct: 365 FFAVFFTWVG 374


>gi|29654061|ref|NP_819753.1| ABC transporter permease [Coxiella burnetii RSA 493]
 gi|161830426|ref|YP_001596961.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|165924016|ref|ZP_02219848.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|212212807|ref|YP_002303743.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
 gi|29541327|gb|AAO90267.1| ABC transporter permease protein [Coxiella burnetii RSA 493]
 gi|161762293|gb|ABX77935.1| ABC transporter, permease protein [Coxiella burnetii RSA 331]
 gi|165916539|gb|EDR35143.1| ABC transporter, permease protein [Coxiella burnetii RSA 334]
 gi|212011217|gb|ACJ18598.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212]
          Length = 377

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 114/368 (30%), Positives = 189/368 (51%), Gaps = 13/368 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKY 65
               G+W    +S + D + +   K   S+  I+    IT++D+ GA L   ++  ++  
Sbjct: 20  LFCLGDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKITKMDSAGALLFYTLINHLKSL 77

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              I++ G+S + + L  LI    +   +     ++        + Y +G+  V      
Sbjct: 78  GKAIEITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVL 131

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G V +  G+        +    +++R +   G   +P+V L+SF+ G V+  Q
Sbjct: 132 IDFLTFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQ 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ 
Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+  +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH   
Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F+
Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369

Query: 366 IFYFAIGI 373
           + +   GI
Sbjct: 370 VIFSLRGI 377


>gi|116690919|ref|YP_836542.1| hypothetical protein Bcen2424_2901 [Burkholderia cenocepacia
           HI2424]
 gi|116649008|gb|ABK09649.1| protein of unknown function DUF140 [Burkholderia cenocepacia
           HI2424]
          Length = 447

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +   
Sbjct: 92  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 151

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 152 AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 380

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 381 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 440

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 441 FQNVGL 446


>gi|154706662|ref|YP_001424136.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154355948|gb|ABS77410.1| ABC transporter permease protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 377

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 13/368 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKY 65
               G+W    +S + D +   +     S+  I+    IT++D+ GA L   ++  ++  
Sbjct: 20  LFCLGDWTVSHLSPLEDQLP--LCAEKLSEKVIIHADKITKMDSAGALLFYTLINHLKSL 77

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              I++ G+S + + L  LI    +   +     ++        + Y +G+  V      
Sbjct: 78  GKAIEITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVL 131

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G V +  G+        +    +++R +   G   +P+V L+SF+ G V+  Q
Sbjct: 132 IDFLTFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQ 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ 
Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+  +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH   
Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F+
Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369

Query: 366 IFYFAIGI 373
           + +   GI
Sbjct: 370 VIFSLRGI 377


>gi|300692713|ref|YP_003753708.1| abc-type transport system, permease abc transporter protein
           (resistance to organic solvents) [Ralstonia solanacearum
           PSI07]
 gi|299079773|emb|CBJ52450.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum PSI07]
          Length = 374

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++  +++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLNNANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +         ++   ++                      N    +G  +  F 
Sbjct: 75  GNRWP--ERLDARPDQRRMIDRVARLD-------PGGWKKRIAPRINPVMVLGGAMFDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 GHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|146277759|ref|YP_001167918.1| hypothetical protein Rsph17025_1720 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556000|gb|ABP70613.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 366

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 195/364 (53%), Gaps = 9/364 (2%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           + +G      ++    ++  A           +D+ A+  +DT GA  I+   ++     
Sbjct: 12  QISGRLTIETLARTRHNLASA------EREGRLDMGAVEALDTAGAWAILSAQKRAEAGG 65

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
           +   +    E    L++      +   +P+R        +    +G+++   +  S    
Sbjct: 66  RPFEIVNLSEAHRHLLATVADA-MPEPEPRRRTIPGRPGDGLAQLGQEVAGGLRGSLDSM 124

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
              G V+++ G       + +  L  L+  M   G + VP+V L+ F+ G V+A QG+ Q
Sbjct: 125 AFFGQVVAHLGGLLIHPRRLR--LTPLVHHMQEAGWNAVPIVTLMGFLIGIVLAFQGSTQ 182

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  FGAE++ +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EEIDA+R +GL
Sbjct: 183 LKAFGAEVYVVDLVAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAMRVLGL 242

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D +  L+ PR+ AL+I LP+L  +A+ + ++G +++ W    I   +F ++  +   + +
Sbjct: 243 DPIDRLVLPRLIALVILLPVLGFIASMAGLVGGALMAWIDLGITPGMFRTQLLADTDVNH 302

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF++F+ 
Sbjct: 303 AIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSVFFA 362

Query: 370 AIGI 373
             G+
Sbjct: 363 VWGL 366


>gi|182681137|ref|YP_001829297.1| hypothetical protein XfasM23_0579 [Xylella fastidiosa M23]
 gi|182631247|gb|ACB92023.1| protein of unknown function DUF140 [Xylella fastidiosa M23]
 gi|307579585|gb|ADN63554.1| ABC transporter permease [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 396

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 118/368 (32%), Positives = 188/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                  +G+W    +          + +S  +    ++   I ++D+ GA  ++ F  +
Sbjct: 41  DRGQIHLSGSWVLANLL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFTTR 95

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K +          L S I     +  K +          F      +G  +VK   +
Sbjct: 96  TGLKNEAIEFREEHRPLISTIEILDDEHPKPE------RDYGFLAALERLGIAVVKTRRN 149

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +    +      +F+    S +  M  VG+  VP+V+++S++ GAVIA 
Sbjct: 150 IIDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 207

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI
Sbjct: 208 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 267

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +T+GLD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T
Sbjct: 268 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 327

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L 
Sbjct: 328 MQLRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 387

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 388 ALWFMRMG 395


>gi|94496554|ref|ZP_01303130.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58]
 gi|94423914|gb|EAT08939.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58]
          Length = 369

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G TV R +GN     + ++   +       +Q     VD+S +  IDTIGA  +    
Sbjct: 12  RDGGTVIRLSGNLAIACLHDLPARLDA-----VQGPINAVDVSQVDHIDTIGAWTVHSAA 66

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++ +    + G +   ++L   +                   +    +   IG  ++   
Sbjct: 67  KRLNAP--ITGANEDAQRLIEAVGTLDEPFSLRP-----DKVSPLTRVVGQIGDAVISAG 119

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G  +           +F+    +++++   VGVS + ++ L+SF+ G VI
Sbjct: 120 TTLMGLLGFFGASLVAAWGLIRHPSRFRVN--AVVQRFEVVGVSALGIIGLMSFLIGIVI 177

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  A++G+MK+ EEID
Sbjct: 178 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEID 237

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+G+  +  L+ PR  A+++ +PLL   A+  A+IG   +     DIP   F  R  
Sbjct: 238 AMRTIGVSPMEALVMPRTLAVVVMMPLLGFYASIVAVIGGGFLCAVALDIPPITFVQRLR 297

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GLIKAP     I +    +G  V  ++  +G + T  VVQ+I +VI+ID+
Sbjct: 298 EVVPITDLWVGLIKAPVFGIIIALSGCYQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 357

Query: 363 LFAIFYFAIG 372
            FA+F+  +G
Sbjct: 358 FFAVFFTWVG 367


>gi|71274907|ref|ZP_00651195.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71898795|ref|ZP_00680963.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71901849|ref|ZP_00683912.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|170729829|ref|YP_001775262.1| ABC transporter permease [Xylella fastidiosa M12]
 gi|71164639|gb|EAO14353.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71728377|gb|EAO30545.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71731381|gb|EAO33444.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|167964622|gb|ACA11632.1| ABC transporter permease [Xylella fastidiosa M12]
          Length = 372

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 117/368 (31%), Positives = 187/368 (50%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                  +G+W    +          + +S  +    ++   I ++D+ GA  ++ F  +
Sbjct: 17  DRGQIHLSGSWVLANVL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFATR 71

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K +          L S I     +  K +          F      +G  +VK   +
Sbjct: 72  TGLKNEAIEFREEHRPLISTIEILDDEHPKPE------RDYGFLAALERLGIAVVKTRRN 125

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +    +      +F+    S +  M  VG+  VP+V+++S++ GAVIA 
Sbjct: 126 IIDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 183

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI
Sbjct: 184 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 243

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +T+GLD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T
Sbjct: 244 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 303

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L 
Sbjct: 304 MQFRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 363

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 364 ALWFMRMG 371


>gi|149187032|ref|ZP_01865339.1| ABC-type transport system permease component [Erythrobacter sp.
           SD-21]
 gi|148829321|gb|EDL47765.1| ABC-type transport system permease component [Erythrobacter sp.
           SD-21]
          Length = 369

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 118/369 (31%), Positives = 205/369 (55%), Gaps = 14/369 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G +V   +G +    +  + +D+     + +    A +DLS ++EIDT+GA L      
Sbjct: 13  EGGSVLALSGPYLVSTVGAVDEDL-----RGLDEPLARIDLSEVSEIDTVGAWLACQLAS 67

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           ++    ++ G S    +L   ++      + +++   +     +  +   +G+K+    +
Sbjct: 68  RHGA--EITGASERATRLLGALT-----GMDSEQALSAPRLPVWSRVPEAMGEKMFNARS 120

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            +      LG  + + G    +  +F+    +L+ Q+  VGVS +P++ L+SF+ G VIA
Sbjct: 121 GAIGVISFLGAALISAGNLIRNPRRFRTV--ALVHQVELVGVSALPIIGLMSFLIGIVIA 178

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQGA QL+ FGAE  +++L+  + LRE+GVL+TA+M+AGRSGSA  A++G+MK+ EE+DA
Sbjct: 179 QQGAVQLAAFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVDA 238

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+G+  +  L+ PRI + ++ +PLL   A+  AIIG ++V      IPF  F SR   
Sbjct: 239 MRTIGISPMEALVIPRILSAVLMMPLLGFYASCMAIIGGAVVGDLMLGIPFWTFLSRIQE 298

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +++ GLIKAP     +G+     G  V  +S  +GK+ T  VV +I  VI++D+ 
Sbjct: 299 VVPTYDVWVGLIKAPVFGLIVGLAGCYNGMQVEGNSEEVGKRTTLSVVAAIFAVIVLDAF 358

Query: 364 FAIFYFAIG 372
           FA+F+  +G
Sbjct: 359 FAVFFTELG 367


>gi|300705335|ref|YP_003746938.1| ABC transporter permease [Ralstonia solanacearum CFBP2957]
 gi|299072999|emb|CBJ44356.1| putative abc-type transport system, permease component abc
           transporter protein (resistance to organic solvents)
           [Ralstonia solanacearum CFBP2957]
          Length = 374

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 176/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRGARRQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +         ++   ++                      N    +G  ++ F 
Sbjct: 75  GNRWP--EHLDARADQRRMIDRVARLD-------PGGWKKHIAPRINPVTVLGGAMLDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +       ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 DHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI+IVI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|15837904|ref|NP_298592.1| hypothetical protein XF1303 [Xylella fastidiosa 9a5c]
 gi|9106294|gb|AAF84112.1|AE003963_9 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 396

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 118/368 (32%), Positives = 187/368 (50%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                  +G+W    +          + +S  +    ++   I ++D+ GA  ++ F  +
Sbjct: 41  DRGQIHLSGSWVLANVL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFATR 95

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K    G       L S I     +  K +          F      +G  +VK   +
Sbjct: 96  TGLKNDAIGFREEHRPLISTIEILDDEYPKPE------RDYGFLAALERLGIAVVKTRRN 149

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +    +      +F+    S +  M  VG+  VP+V+++S++ GAVIA 
Sbjct: 150 IVDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 207

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI
Sbjct: 208 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 267

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +T+GLD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T
Sbjct: 268 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 327

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L 
Sbjct: 328 MQFRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 387

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 388 ALWFMRMG 395


>gi|300312192|ref|YP_003776284.1| organic solvents resistance ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300074977|gb|ADJ64376.1| ABC-type transport system involved in resistance to organic
           solvents, permease component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 380

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 108/365 (29%), Positives = 193/365 (52%), Gaps = 4/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    G+W       ++  +  A  +    +  +++ SA++  DT+GA+L++  +     
Sbjct: 19  VLHVEGDWTLRNYRALSRQIAQA--RPALGEQTVLEFSALSAFDTVGAKLLVDLLGVPAA 76

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             + Q  ST      +L++     K                ++   +G   +     +  
Sbjct: 77  LRQTQADSTLAPAWRALLAVVAEAKAIAMPKPAPPRQAWITDMLERVGAATLSLRACALG 136

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +GL +           +++    +++ Q+   G+  VP+V L++F+ GAV+A  GA
Sbjct: 137 LLGFMGLCLQTLLSSFWRPSRWRV--TAVVAQIEQTGLDAVPIVSLLTFMVGAVVAFLGA 194

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L+ FGA I+++DL++   LRE  VLLTA+++AGR+ S+  A+IGSMK NEEIDAIR +
Sbjct: 195 TVLANFGASIYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRAL 254

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD +++L+ PR+ AL++++P LT +A  S + G ++V     DI   +F S       +
Sbjct: 255 GLDPIKLLVLPRLIALLVAMPALTFIAMLSGLFGGAMVCALSLDISPTMFLSLLQQDVGI 314

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G++KAP  A  + ++   EGF V   + S+G+  T+ VVQSI +VI++D+L A+F
Sbjct: 315 RHFILGMVKAPLFAFVVAVIGCNEGFKVSGSAQSVGQHTTSSVVQSIFVVILLDALAALF 374

Query: 368 YFAIG 372
           +  +G
Sbjct: 375 FMEMG 379


>gi|28198464|ref|NP_778778.1| ABC transporter permease [Xylella fastidiosa Temecula1]
 gi|28056548|gb|AAO28427.1| ABC transporter permease [Xylella fastidiosa Temecula1]
          Length = 372

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 118/368 (32%), Positives = 188/368 (51%), Gaps = 13/368 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                  +G+W    +          + +S  +    ++   I ++D+ GA  ++ F  +
Sbjct: 17  DRGQIHLSGSWVLANLL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFTTR 71

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              K +          L S I     +  K +          F      +G  +VK   +
Sbjct: 72  TGLKNEAIEFREEHRPLISTIEILDDEHPKPE------RDYGFLAALERLGIAVVKTRRN 125

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +    +      +F+    S +  M  VG+  VP+V+++S++ GAVIA 
Sbjct: 126 IIDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 183

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G+  L  FGAEIF ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI
Sbjct: 184 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 243

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +T+GLD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ SR H T
Sbjct: 244 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 303

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   G+ KAP  A  IG++   EG  V   + S+GK  T+ VVQ+IS+VIIID+L 
Sbjct: 304 MQLRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 363

Query: 365 AIFYFAIG 372
           A+++  +G
Sbjct: 364 ALWFMRMG 371


>gi|301062341|ref|ZP_07203004.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300443545|gb|EFK07647.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 390

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 175/373 (46%), Gaps = 6/373 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +SE      +F G+W           ++  ++          D   ++  D+     +  
Sbjct: 24  LSEQKTLQIKFQGDWILENKRPSISALIKQMDSEAAVRQITFDTLGLSRWDSALLICLTK 83

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +EK   K          E  F L+           + +     N   +  + +G + V 
Sbjct: 84  IIEKASQKDIPLDGKGLPEGAFKLLDLASTV----PEKKGVHKKNGRPSFLFQVGSESVA 139

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F N        +G   +   +F     +F+     L+R +   G+  +P+V LIS + G 
Sbjct: 140 FFNSFLEALGFVGEAFNAFSKFLTGKARFRR--SDLMRIIQDCGIEALPIVSLISLLVGL 197

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA QL+ FGA+I+  +L+ I  +R +G ++  +++AGR+G+A  A++G+M++NEE
Sbjct: 198 ILAFVGAVQLTMFGAQIYVANLVGIAMVRVMGAVMAGIIMAGRTGAAFAAQLGTMQVNEE 257

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA +TMG+  +  L+ PR+ AL + +PLL + A+   I+G  IV     D+    ++++
Sbjct: 258 IDAFKTMGISPMEFLVLPRMLALTLMMPLLCLYADLMGILGGFIVGVGMLDLNMMEYYNQ 317

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  TL++++ G++++      + +     G   G  ++++G   T+ VV  I  +I+ 
Sbjct: 318 TKAAVTLSDLWIGIVQSAVFGMLVALAGCLRGMQCGRSASAVGDATTSAVVTGIVSIIVA 377

Query: 361 DSLFAIFYFAIGI 373
            ++  +    +GI
Sbjct: 378 TAVITVITNMMGI 390


>gi|120554124|ref|YP_958475.1| hypothetical protein Maqu_1197 [Marinobacter aquaeolei VT8]
 gi|120323973|gb|ABM18288.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8]
          Length = 382

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 113/373 (30%), Positives = 190/373 (50%), Gaps = 12/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E G    +F+G+W     S +            ++ +   D S +  +DT GA L++  
Sbjct: 19  AEFGGHTLKFSGDWTLSHYSVLNRQTTAL---KPRAAACNPDFSGLGRLDTAGASLMVKL 75

Query: 62  ME--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           +        ++   +      L   ++        NQ        N        IGKK+ 
Sbjct: 76  LGSDALISALQRAELPDEQRALIQAVAEAM-----NQPSAAVATVNPVVAFLAEIGKKVT 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                    A  +G  +           +++      +  ++  G++ +P+V L++F+ G
Sbjct: 131 TLGQLVWLLAGFIGQTLGTLFYILPRPTRWRI--TPFVAALHDTGLNALPIVALLTFLVG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A  GA  L  FGA I+++DL++   LRE GVLL A+++AGR+ SA  A+IG+MK+NE
Sbjct: 189 AVVAFLGATVLEDFGATIYTVDLVAFSFLREFGVLLAAILLAGRTASAFTAQIGAMKVNE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAIRT+GL+ V +L+ PR+ A++ SLP+LT +   S ++G ++V     DIP + F +
Sbjct: 249 ELDAIRTLGLNPVELLVVPRVLAMMFSLPILTFIGMISGMVGGAVVCAVALDIPPSQFIA 308

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L +   GL KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI+
Sbjct: 309 IVERDIALKHFLVGLGKAPVFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVIL 368

Query: 360 IDSLFAIFYFAIG 372
           +DS+ A+F+  +G
Sbjct: 369 LDSVAALFFMEMG 381


>gi|152980330|ref|YP_001354931.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280407|gb|ABR88817.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 374

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 13/371 (3%)

Query: 4   NGITVFRFAGNWKSPEI--SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           N       AG+W+   +      D +   +    + D    DLS I  +D IGA+L+   
Sbjct: 14  NDQATVIAAGSWQVRALIDPGAMDKLTATLRGVRKVDETRWDLSGIEALDYIGAQLLWNA 73

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             K         ++   E  F  +  T   ++K     R + ++++           ++ 
Sbjct: 74  WGKKRPPQLT--LAPQHESFFQRLEQTGTLQVKRPPQHRWYTFSAYLQFK-------LRM 124

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +       ++G ++ + G F       +G    +   +++ G   + +  L+ F+ G V
Sbjct: 125 ADHMLGFITLIGQLVMDMGRFIRQPQ--RGPWKEISANIFHTGYQALGITALVGFLIGVV 182

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL QFG +IF ++++ +  +RE+G LL A+++AGRSGS+I A++G M++ EE+
Sbjct: 183 LSYLSAQQLHQFGGDIFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEEL 242

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MGL     LI P++ AL IS+PLL +  +  A+IG          + F  F    
Sbjct: 243 DAMLVMGLPHGYRLIMPKVIALAISMPLLVVWTDAMALIGGMAAANVELGLSFKYFLREL 302

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                LAN + GL K       I +VA   G  +  ++ SLG+  T  VV +I++VI+ D
Sbjct: 303 PDAVPLANYWIGLGKGVVFGSLIALVACHFGLRIKPNTESLGEGTTISVVTAITVVILAD 362

Query: 362 SLFAIFYFAIG 372
           ++FAI +  +G
Sbjct: 363 AVFAIVFSGVG 373


>gi|254470335|ref|ZP_05083739.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
 gi|211960646|gb|EEA95842.1| ABC transporter permease protein [Pseudovibrio sp. JE062]
          Length = 382

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 136/372 (36%), Positives = 209/372 (56%), Gaps = 6/372 (1%)

Query: 2   SENGITVF-RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +E+G  +    +G W   +     ++++  +  S+      VDL A++ +DT GA L+  
Sbjct: 15  AEDGALLLLTASGAWGIRQ-GATCENLINQVAASLTHSVICVDLKAVSFLDTAGAWLLQR 73

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
           F  +   + +        E+   L+    R+++ N   + S   NSF N    +G+   +
Sbjct: 74  FQMEQAEQGREVKFLYEDERFDILLKEVDRQEVDNPTEEHSG--NSFLNYLEAVGEATRQ 131

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D+     +LG + +          + +    S+  Q     +  VP+V L+SF+ G 
Sbjct: 132 LGRDTRDILAMLGSLTATITAAATHPSRLRPI--SIGVQFQRSCMGAVPIVCLMSFLIGG 189

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +IAQQG F L QFGAEIF +DL  IL LREIGV+LTA+M+AGRSGSA  AE+GSMK+ EE
Sbjct: 190 IIAQQGGFYLKQFGAEIFVVDLSGILVLREIGVILTAIMVAGRSGSAYTAELGSMKMQEE 249

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++  GL    +LI PR+ AL+I+LP+L  LAN +A+ GA +  W Y  I    F ++
Sbjct: 250 IDALQVTGLRVTEVLILPRLVALMIALPILVFLANIAALFGAGLTCWWYLGIVPHSFIAQ 309

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  T+  +  G++KAPFMA  IG++A  EG  V   S SLG+  T  VV+SI +VI++
Sbjct: 310 LQAAVTVDTLMVGIVKAPFMALIIGLIACMEGMKVEGSSESLGRHTTVSVVKSIFMVIVV 369

Query: 361 DSLFAIFYFAIG 372
           D +FA+F+ +IG
Sbjct: 370 DGVFAVFFASIG 381


>gi|153209306|ref|ZP_01947341.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212219048|ref|YP_002305835.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
 gi|120575422|gb|EAX32046.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212013310|gb|ACJ20690.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154]
          Length = 377

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 13/368 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKY 65
               G+W    +S + D + +   K   S+  I+    I ++D+ GA L   ++  ++  
Sbjct: 20  LFCLGDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKIIKMDSAGALLFYTLINHLKSL 77

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              I++ G+S + + L  LI    +   +     ++        + Y +G+  V      
Sbjct: 78  GKAIEITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVL 131

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G V +  G+        +    +++R +   G   +P+V L+SF+ G V+  Q
Sbjct: 132 IDFLTFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQ 189

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  + A+IF +D+     LRE G L+TA++ AGR+ +A  A+IG+MK+NEEIDA+ 
Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG+  +  L+ P+I ALIISL LLT+ A+     G+ I+     DI +  F  RFH   
Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GLIKAP     I  V   +GF VG  ++S+G+K T   VQSI ++II D++F+
Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369

Query: 366 IFYFAIGI 373
           + +   GI
Sbjct: 370 VIFSLRGI 377


>gi|84516868|ref|ZP_01004226.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
 gi|84509336|gb|EAQ05795.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis
           SKA53]
          Length = 380

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 123/373 (32%), Positives = 198/373 (53%), Gaps = 13/373 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G         +  DV+       +    +VD++ ++ +DT GA  ++   
Sbjct: 19  DSDGARLSVQGRLTIDSFEHLDRDVIAQQASRAE----VVDIAQLSHMDTAGAWFLLDLA 74

Query: 63  EK--YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +        + G S     L   +      K    KP          +    +G+++  
Sbjct: 75  GRTSAGAASVITGASDAQTLLIEAVRTNLPPKAAGAKPAV-----RLVDHFETLGRRVAL 129

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             + +      LG VI+            +  L S++     VG+  VP+V L++F+ G 
Sbjct: 130 AGSHALEMLSFLGQVIAAMARVIRHPRALR--LTSVVHHCQQVGLQAVPIVALMAFLIGV 187

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG+ QL QFGAE+F +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EE
Sbjct: 188 VLAFQGSAQLRQFGAEVFVVDLIAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREE 247

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RT+GLD V IL+ PR+ AL++ LP L ++AN S + G +++ W   D+  AVF +R
Sbjct: 248 IDAMRTLGLDPVAILVVPRVLALVLMLPALGLIANVSGLFGGALMSWIELDVSPAVFQAR 307

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S   + +   G+IKAP  A  IGI+   +G  VG  + SLG++ +  VV +I +VI+ 
Sbjct: 308 LVSNTDVWHFNVGMIKAPVFALIIGIIGCYQGMKVGGDAESLGRQTSASVVMAIFMVIVA 367

Query: 361 DSLFAIFYFAIGI 373
           D+LF+IF+  +G+
Sbjct: 368 DALFSIFFAIVGV 380


>gi|222823161|ref|YP_002574734.1| ABC transporter permease (DUF140 domain protein) [Campylobacter
           lari RM2100]
 gi|222538382|gb|ACM63483.1| putative ABC transporter, permease protein (DUF140 domain protein)
           [Campylobacter lari RM2100]
          Length = 370

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 16/369 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFME 63
            +F   G W    + ++               + I D + +  IDT G      +   ++
Sbjct: 14  CIFSVFGIWDKTSVGKLEK------LDFPTQKNIIFDFTNLDFIDTAGIRYFLALENELK 67

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +   ++    + +   +LF L    ++    + + +      + K+   ++GKK+V+   
Sbjct: 68  QKGFELSRVNLKSEHAKLFELCQKHYKSFCDSYEDK-----KTIKDFFENLGKKVVESFT 122

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                 + +GL+I+          K +    + +  +    ++ +P+++L S + G V+A
Sbjct: 123 LLVQFLNFIGLIIATCFNTLFHLKKLR--FRAFLYHVENSAINALPIIMLTSLLVGVVLA 180

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A+QL+QFGA I+ +DLM I   RE+  L++A++IAGRS S+  A+IG MK+ +EIDA
Sbjct: 181 YQAAYQLAQFGANIYIVDLMGISATRELAPLISAIVIAGRSASSYTAQIGVMKLTDEIDA 240

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TMG      +I PR+ AL +++PL+ I+A+  +IIG  IV W   +I  + F SRF  
Sbjct: 241 MKTMGFKESEFIILPRVLALALAMPLVVIVADILSIIGGIIVAWFSLEISASEFMSRFKE 300

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L +I  GLIKAP     I  +A   GF V   + S+G   T  VV +I  VI  D++
Sbjct: 301 AVELKHIIIGLIKAPIFGFLIASIACFRGFFVQKTTESIGVYTTKSVVNAIFWVIAFDAI 360

Query: 364 FAIFYFAIG 372
           F++F    G
Sbjct: 361 FSVFLTKAG 369


>gi|159044594|ref|YP_001533388.1| hypothetical protein Dshi_2050 [Dinoroseobacter shibae DFL 12]
 gi|157912354|gb|ABV93787.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 384

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 126/374 (33%), Positives = 209/374 (55%), Gaps = 15/374 (4%)

Query: 1   MSENGITVF-RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +S++   V    +G+     ++++   +         + S  +DLS I  IDT GA L+ 
Sbjct: 25  LSQDEAGVAGALSGDLTIYGVADLQRQLAAR-----PAGSLTLDLSGIGRIDTAGAWLLA 79

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                    ++L G    + +L + +      K + + P+R+    +  +    +G+++V
Sbjct: 80  ELAR--GEGVRLVGAPDKVARLIANV-----AKAEPEHPERTETPPTLTDRLERLGRQVV 132

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +          +LGLV++  G       +F+    +L+     VG+  VP+V L++F+ G
Sbjct: 133 EGTKFLGGLTGMLGLVLARFGRALRHPREFRM--TALVHHCEEVGLRAVPIVALMAFLIG 190

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QGA QL QFGAE+F +DL+SI  LRE+G+LLTA+++AGR+ S+  A IGSMK+ E
Sbjct: 191 IVLAFQGASQLRQFGAEVFVVDLISISILRELGILLTAIIVAGRTASSFTAAIGSMKMRE 250

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+RT+GLD   +L  PR+ AL+I LP+L ++AN S ++G +++ W    I  A+F +
Sbjct: 251 EIDAMRTLGLDPAMLLFLPRVLALLIMLPILGLIANLSGLLGGALMSWIELGISPAMFQT 310

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R      + +   GL+KAPF A  IG+V    G  V  ++ SLG+  +  VV +I  VI+
Sbjct: 311 RLIEGTDINHAVVGLVKAPFFAILIGVVGCHAGMQVEGNAESLGRMTSGAVVTAIFAVIV 370

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+IF+  +GI
Sbjct: 371 TDAAFSIFFAQMGI 384


>gi|107102741|ref|ZP_01366659.1| hypothetical protein PaerPA_01003808 [Pseudomonas aeruginosa PACS2]
          Length = 372

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 114/366 (31%), Positives = 185/366 (50%), Gaps = 4/366 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G+W     + +  +V     +S  + +A  DLS +  +DT GA L+   +    
Sbjct: 10  ARVRAIGDWTLAHYTALEREVTRL--RSEVAANASFDLSQLGALDTAGAALLAELLGAER 67

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
                +       +  +L+           +P++     +   L   IG  +  F     
Sbjct: 68  LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 127

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +GL +            ++     L+  +   G+  VP++ L++F+ GAVIA  G
Sbjct: 128 ALLGFIGLTLETLFRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 185

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR 
Sbjct: 186 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 245

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       
Sbjct: 246 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIG 305

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+
Sbjct: 306 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 365

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 366 FFMEMG 371


>gi|170748370|ref|YP_001754630.1| hypothetical protein Mrad2831_1952 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654892|gb|ACB23947.1| protein of unknown function DUF140 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 384

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 134/371 (36%), Positives = 210/371 (56%), Gaps = 8/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +G       G W + + +   +     I  + ++    VDLS I  +DT+GA ++   
Sbjct: 21  SADGR--LALDGRWTADQ-APTVEAAAARIAAAGRAGPVAVDLSGIERLDTLGAWVLERT 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +               +   L+     ++     P+    +     L    G++ V+ 
Sbjct: 78  RAEIEQAGSALTYLGARPEHRILLGEVRLREPDAPPPR---RHGPVVGLLDATGRRTVQG 134

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +    LG +I+  G        F+G   +LI Q+  V ++G P+++LISF+ G +
Sbjct: 135 GHEFVTALAFLGELIAACGRVALRPGTFRGN--ALINQIQQVALNGTPIIVLISFLVGGI 192

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSAI AEIGSM++ EE+
Sbjct: 193 VAQQGIFQLQRFGAQTFVVNLIGLLILREMGVLLTSIMVAGRSGSAITAEIGSMRMREEV 252

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MGLD V ILI PR+ AL+I LP+LT++ + +A+ G  +    Y  +    F  R 
Sbjct: 253 DALRVMGLDPVEILIVPRVLALMIGLPMLTLIGDLAALAGGGLTAMLYGGLTLDQFLVRL 312

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   + ++  GLIKAPFMA  IG++A  EGFAV   + SLG+ VT  VV+SI +VI++D
Sbjct: 313 QAAVGVHHVMVGLIKAPFMALTIGVIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLD 372

Query: 362 SLFAIFYFAIG 372
            LFA+F+ AI 
Sbjct: 373 GLFAVFFAAID 383


>gi|220924819|ref|YP_002500121.1| hypothetical protein Mnod_4961 [Methylobacterium nodulans ORS 2060]
 gi|219949426|gb|ACL59818.1| protein of unknown function DUF140 [Methylobacterium nodulans ORS
           2060]
          Length = 386

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 124/370 (33%), Positives = 204/370 (55%), Gaps = 4/370 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +     R +G W + +   +             +    +DLS ++ +DT+GA ++     
Sbjct: 21  SDGVQARLSGRWTADQAPAVEAAAAGIAASPAGAGRIQIDLSGLSRLDTLGAWVLERTRS 80

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +    +    +   L+     ++ +    +R        +L   +G  + +   
Sbjct: 81  EIAAAGRAVEYAGARPEHRILLREVAYREPETAPARRRGLGP--VDLLAGLGAGMRQLGA 138

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +  S    LG V++      A    F+    + + QM  + + G P+++LI+F+ G ++ 
Sbjct: 139 EGLSWLGFLGEVVAACLRVLARPRSFRR--AAFVNQMEQIALRGTPIIMLIAFLVGCIVT 196

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG  QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA  AEIGSM++ EE+DA
Sbjct: 197 QQGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDA 256

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MGLD + ILI PRI AL+++LP+L  LA+ +A+ G ++    Y ++    F +R  +
Sbjct: 257 LRVMGLDPIEILIVPRILALMMALPMLGFLADLAALAGGALTSLAYGNLSLDAFLARLQN 316

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +   GLIKAPFMA  IGI+A  EGF V   + SLG+ VT  VV+SI +VI++D +
Sbjct: 317 AVSYRHALVGLIKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGV 376

Query: 364 FAIFYFAIGI 373
           FAIF+ AI +
Sbjct: 377 FAIFFAAIDL 386


>gi|157736379|ref|YP_001489062.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
 gi|157698233|gb|ABV66393.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
          Length = 370

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 182/365 (49%), Gaps = 12/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
                 W    +  I   +   +    ++    +D + + E D+     ++ F+  +  K
Sbjct: 18  LTLLNIWNKQTLPNIIKKIE--LLNFSKNSKLNIDFANLKECDSSAIIYLISFLNTFEEK 75

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                 + + E++F      ++ K+  ++ +  FF          +GKK      +S   
Sbjct: 76  NITILNNKNHEKIFDFYKKHYQTKVLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G V         +  K +    ++++ +       + +V + SF+ G VIA QG+ 
Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL +FGA IF ++++SI   REI  L+TA++IAGRS S+  AEIG+MKI EEIDA++TM 
Sbjct: 186 QLEKFGANIFIVEMISITIFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            +    L  PRI+AL ISLPLL   A+   + G  ++     D+ F  F +R H+   L 
Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFADIIGVFGGMVIASSSLDVTFIEFINRLHNEVPLK 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  G+ KA F   AI I+    GF V  ++ S+GK  T  VV +I +VI+ID++F++ +
Sbjct: 306 HLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSIGKFTTMSVVNAIFVVILIDAVFSVIF 365

Query: 369 FAIGI 373
             +GI
Sbjct: 366 TQMGI 370


>gi|254292866|ref|YP_003058889.1| hypothetical protein Hbal_0490 [Hirschia baltica ATCC 49814]
 gi|254041397|gb|ACT58192.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814]
          Length = 380

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 111/370 (30%), Positives = 197/370 (53%), Gaps = 6/370 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V    G W +  +  I   +    +K + S    +D+S + + DT GA ++   + +
Sbjct: 16  GDPVMVLEGAWTAFTVGAIDKPLRQLTSKDV-SKDVSLDVSQLEDFDTAGAYVVDRTLRQ 74

Query: 65  YHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                  L  +      + SL++  +    K +  +++   + F  L   +G   V  + 
Sbjct: 75  LGAPSGSLAKIVGDTHSVISLLTAVN--AAKPEPVKKAKDRHGFTQLLDRVGHGTVDALK 132

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +       +G   +       +  K +    S++  M   G++ +P+V ++SF  G VIA
Sbjct: 133 EGWGILEFIGEAFTTVFFLLLNPKKIR--WTSVVAIMEEAGLNALPIVSMLSFFIGIVIA 190

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G   L  FGA++F+++++  L LRE G++LTA+++AGR+ S+  AEIG+MK+ EE+DA
Sbjct: 191 FLGVNLLQSFGAQVFTVEMVGFLMLREFGLVLTAILLAGRTDSSFTAEIGAMKMREEVDA 250

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MGL+ + +L++PR+ AL++  P L+  A  S ++G  +V+W   DI  A+F  R   
Sbjct: 251 MRVMGLNPMEVLVAPRLIALLVMTPFLSFFAMISGLVGGLLVMWGVMDISPAMFIQRIQD 310

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           T    N + G++KAP  A  I +V  ++G  V     SLG++ T+ VVQ+I +VI+ID++
Sbjct: 311 TVPGQNFWVGIVKAPVFATVIALVGCRQGLLVSGDVQSLGQRTTSSVVQAIFLVIVIDAI 370

Query: 364 FAIFYFAIGI 373
           FAI Y  +G+
Sbjct: 371 FAILYMEMGL 380


>gi|78067712|ref|YP_370481.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77968457|gb|ABB09837.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 374

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +   
Sbjct: 19  TVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                 V+       ++     R   + + P+R   ++    L    G+ I  F      
Sbjct: 79  PGVALSVTQ-----RTIFERIERLDSEREAPERVVRFDPVTRL----GQAIFGFGEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL I++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|206559095|ref|YP_002229855.1| hypothetical protein BCAL0697 [Burkholderia cenocepacia J2315]
 gi|198035132|emb|CAR51006.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 374

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +   
Sbjct: 19  TVRLTGQWTALALARNRGAVARRVASIATGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R    +    L    G+ I  F      
Sbjct: 79  AGVALSATQ-----RTIFERIERLDSEREAPERVVRVDPVTRL----GQAIFSFGEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPQTMP--WRETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     L+ PR+ AL +++PLL +  N  A+ G +I       I    F         +
Sbjct: 248 GIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGAIAAKFVLGIDVNYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|77463402|ref|YP_352906.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|77387820|gb|ABA79005.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
          Length = 366

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 108/363 (29%), Positives = 191/363 (52%), Gaps = 9/363 (2%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
             G      + E    +              +D++A+  +DT GA  ++   ++     +
Sbjct: 13  LRGRLTIETLPETQRSLGSVGAGE------QIDMAAVEALDTAGAWALLQAQKRAEAAGQ 66

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
              +    E    L+       +   + +R        +   ++G+++ + +  S +   
Sbjct: 67  ALEIVNLSESHRHLLETV-AAAMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLTSVG 125

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
             G V+++ G       + K  L  L+  M   G + VP+V L+ F+ G V+A QG+ QL
Sbjct: 126 FFGEVVTHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQL 183

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
             FGAE++ +DL++I  LRE+G+LLTA+++AGRS SA  A IGSMK+ EEIDA+R +GLD
Sbjct: 184 KSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVLGLD 243

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ PR+ AL+I LP L  +A+ + ++G  ++ W    I   +F ++  +   +++ 
Sbjct: 244 PIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDVSHA 303

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF+IF+  
Sbjct: 304 IIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIFFAV 363

Query: 371 IGI 373
            G+
Sbjct: 364 WGL 366


>gi|91786141|ref|YP_547093.1| hypothetical protein Bpro_0230 [Polaromonas sp. JS666]
 gi|91695366|gb|ABE42195.1| protein of unknown function DUF140 [Polaromonas sp. JS666]
          Length = 383

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/363 (24%), Positives = 174/363 (47%), Gaps = 11/363 (3%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
             G      ++   + +      + ++ +   DLS + ++D +GA+++     +      
Sbjct: 32  LTGRLVWDTLTAQLEILRRHAAPAGEASTVRWDLSGLEKLDHLGAQVLWNHWGRDW---- 87

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
                    Q+            K          + +K+L   +G + +  ++ S     
Sbjct: 88  -----PAQLQVEPSQRAVLETVAKFAVVPPKPRGSDWKDLLVLLGNRALDLVDHSKGLVR 142

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           ++G ++ +         +       L   +Y++G + +P+  L+ F+ G V+A   + QL
Sbjct: 143 LVGQLLLDIIRLVRHPKEGP--WRDLSGHLYHIGATALPITALVGFLIGVVLAYLISQQL 200

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            QFGA+ + ++++ I  +RE+G +L A++IAGRSGSAI A+IG M++ EE+DA+R MG+ 
Sbjct: 201 RQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVMRVTEELDAMRVMGIA 260

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               L+ PR  AL + +PL+++    +A++G  +       +  + F +        AN+
Sbjct: 261 RGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISMGVTPSYFINSLPRAVDAANL 320

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                K+      I +V    G  V  ++ SLG+  T  VV SI++VI++D+LFA+ + +
Sbjct: 321 TLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASVVTSITVVILVDALFAVVFKS 380

Query: 371 IGI 373
           +GI
Sbjct: 381 VGI 383


>gi|260219765|emb|CBA26623.1| hypothetical protein Csp_H39530 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 387

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 91/378 (24%), Positives = 181/378 (47%), Gaps = 16/378 (4%)

Query: 1   MSEN-GITVFRFAGNWKSPEISE--IADDVVMAINKSIQ--SDSAIVDLSAITEIDTIGA 55
           ++++         G W +  +S   +   +  A+       + +   DL     ID  GA
Sbjct: 21  LAQDPEGPRVILRGRWTADALSAKHVWQPLEKALQGVPGNGAPAVAWDLREAQRIDHTGA 80

Query: 56  ELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
           +++     +               Q   L      +  K   P        +  L   +G
Sbjct: 81  QVLWNAWGRQWPAKL---------QAEPLQKALLDRVAKFTVPTPPVERLDWHALLVSLG 131

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +K+ +  +       ++G ++ +  +      +       +   +Y +G + +P+  L+ 
Sbjct: 132 RKLARVESHLGGMVRLIGQLMLDVLQLLRHPLQGP--WRDVSGHLYRIGATALPITALVG 189

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F+ G V+A   + QL Q+GA+ F ++++ +  +RE+G +L A+++AGRSGSAI A+IG M
Sbjct: 190 FLIGVVLAYLMSKQLRQYGADSFIVNILGMSLIRELGPVLAAILVAGRSGSAITAQIGVM 249

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ EE+DA+R MG+     L+ PR  A+ I++PL+ +    +A++G  +       +  A
Sbjct: 250 RVTEELDAMRVMGIPKGFRLVMPRTLAMAIAMPLVAVWTTMAALLGGMLASDLSMGLTPA 309

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            FF+    T  ++N++  L+K+      I ++A   G  V   + SLG+  T  VV SI+
Sbjct: 310 YFFTALPKTVEISNLWLSLVKSCVFGVLISLLACHHGLRVKPDTQSLGEGTTASVVSSIT 369

Query: 356 IVIIIDSLFAIFYFAIGI 373
           +VI++D+LFA+ + ++G+
Sbjct: 370 MVILVDALFAVIFKSVGL 387


>gi|238028752|ref|YP_002912983.1| hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1]
 gi|237877946|gb|ACR30279.1| Hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1]
          Length = 390

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/386 (26%), Positives = 178/386 (46%), Gaps = 27/386 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI----------------VDLSAI 47
           +G  + R +G W +  ++     VV    K  +   A                  DLSAI
Sbjct: 15  DGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPAAADGPARRWDLSAI 74

Query: 48  TEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
             +D +G + +       H       ++ +   +F  I      +   +   R       
Sbjct: 75  ERLDHVGGQALWRVWG--HRLPDGVVLTDNQRIVFERIERLDEAREAPEPVVR------- 125

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
            +    +G  + +F         + G VI + G               +   +Y  G   
Sbjct: 126 HDPVTRLGLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMP--WTEISANVYNAGAKA 183

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           +P+  L++F+ G V++   A QL QFGA  + ++++ +  +RE+G +L+A+++AGRSGSA
Sbjct: 184 LPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSA 243

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A+IG M++ EE+DA+R MG+     ++ PR+ AL +++PLL +  N  A+ G ++   
Sbjct: 244 ITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAAK 303

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
               I F  F         +AN++ GL K       I +V    GF +  +S SLG+  T
Sbjct: 304 FALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGTT 363

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373
           T VV SI++VI+ D++FAI +  +G+
Sbjct: 364 TSVVSSITVVILADAVFAILFQNVGL 389


>gi|146280488|ref|YP_001170641.1| ABC transporter permease [Pseudomonas stutzeri A1501]
 gi|145568693|gb|ABP77799.1| probable permease of ABC transporter [Pseudomonas stutzeri A1501]
          Length = 362

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 112/363 (30%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           R  G+W     + +  +V     ++   + + ++LS +  +DT GA L+   +       
Sbjct: 4   RIVGDWTLAHYAALRREVQRL--RARIDERSQIELSGLGALDTAGAGLLAELLGPERIAA 61

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
                     +  +L+       +       S     F  +  HIG+ +        +  
Sbjct: 62  IEAWAPQLPAERLALLRTVATA-LDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQRALL 120

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
             +GL +           +++  L SL   +   G+  VP+V L++F+ GAV+A  GA  
Sbjct: 121 GFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFLGATV 178

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+ FGA I++++L+    LRE GVLL A+++AGRS SA  A+IGSMK NEEIDAIRT+GL
Sbjct: 179 LADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEIDAIRTLGL 238

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
             + +L+ PR+ A++I+LP+LT +   S I G  +V     DI   +FF+       +++
Sbjct: 239 SPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDIAVSH 298

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              GL KAP  A  I ++   EGF V   + S+G+  T+ VVQ+I +VI++D++ A+F+ 
Sbjct: 299 FLVGLGKAPVFAFVIAVIGCLEGFKVTGSAQSVGEHTTSSVVQAIFMVILLDAIAALFFM 358

Query: 370 AIG 372
            +G
Sbjct: 359 EMG 361


>gi|190892035|ref|YP_001978577.1| probable ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190697314|gb|ACE91399.1| probable ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 389

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 153/370 (41%), Positives = 227/370 (61%), Gaps = 5/370 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+      R +GNW+S  +  +  D    +++  ++ +  VDLS IT+IDT G  L+   
Sbjct: 23  SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KTGNLTVDLSEITDIDTAGIWLLCRL 80

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +          +  +++    ++    +P+     +    +   IGK     
Sbjct: 81  KKEEEAAGRTVRFEGTNPHIDEMLAM-FSEEPAKPEPEPKEKVSLAARILAPIGKMTYDV 139

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 140 WDNLAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 197

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI
Sbjct: 198 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 257

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F +R 
Sbjct: 258 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARL 317

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D
Sbjct: 318 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMD 377

Query: 362 SLFAIFYFAI 371
            LFA+FY AI
Sbjct: 378 GLFAMFYAAI 387


>gi|239831972|ref|ZP_04680301.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239824239|gb|EEQ95807.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 391

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 150/368 (40%), Positives = 214/368 (58%), Gaps = 3/368 (0%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+   R  G W S  +  + DD V  +  + + ++ I+D+S ++ +DT GA LI    +
Sbjct: 25  DGVRHIRMNGRWVSQSV-NLVDDKVRRLENADKREATIIDISGVSGLDTAGAWLIERLRQ 83

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +   +     +    +    L+    +   +     R        +    +G  +V   +
Sbjct: 84  RLVAQQVEVQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFLISFLAALGGGVVSLGS 143

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D     HILG  I                  +++ QM  +GV  +P++IL+S + GA+IA
Sbjct: 144 DFKMAMHILGATIRGAQ--LKYGRGSGIPFAAIVTQMDRMGVGAIPIIILMSTIVGAIIA 201

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE DA
Sbjct: 202 QQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETDA 261

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  +GL+ V +L+ PR+ AL+I LPLLTI+++ +A+IGA  V W Y +I    F SR H 
Sbjct: 262 LTVIGLNPVGVLVFPRLVALVIVLPLLTIVSDLAALIGAGGVAWFYSNISPDAFISRLHD 321

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D L
Sbjct: 322 AVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDGL 381

Query: 364 FAIFYFAI 371
           FA+FY AI
Sbjct: 382 FAMFYAAI 389


>gi|295690462|ref|YP_003594155.1| hypothetical protein Cseg_3097 [Caulobacter segnis ATCC 21756]
 gi|295432365|gb|ADG11537.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 386

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 107/371 (28%), Positives = 195/371 (52%), Gaps = 11/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G      +G+W +  + +    +  A++     D+   DL+ +   DT GA  I+   
Sbjct: 27  QDGRPTAVLSGDWTARGLFDAGLRLAEALDGV---DNPTFDLTGVNRCDTAGAYAILRAA 83

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K +       + +L  L++   +      K + +   + F+ L   IG+ +    
Sbjct: 84  DE-RLKPEDVKARHGVVRLLQLVAAAIQV-----KSEPAVRPSGFRALLERIGRGVFGLF 137

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +D+ S    LG +++  G       + +     ++      G+  +P+V   +F  GAV+
Sbjct: 138 SDAFSTMAFLGHLLTAVGRSIVDPRRIR--WAPIVALCERAGLDAMPIVATTTFFIGAVV 195

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L+ FGA+++S++L+ I  +RE  +L+TA+++AGRS S+  AEIGSMK+N+EID
Sbjct: 196 ALLGANMLTDFGAQVYSVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEID 255

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MG+D    L+ PR  AL++++P+LT +A  + + G  +V+W   D+    F  R  
Sbjct: 256 AMQVMGVDPYEALVLPRFAALLLTIPILTFVATIAGLAGGILVVWIVLDLSPNFFLQRIV 315

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 + + GL KAP MA  I  +  ++G  VG    +LG++VT  VV +I  +I+ID+
Sbjct: 316 DYVGPTHFWIGLSKAPVMAAVIAAIGCRQGMEVGQDVEALGRRVTAAVVHAIFAIILIDA 375

Query: 363 LFAIFYFAIGI 373
           +FA+ Y  + I
Sbjct: 376 VFALIYMELDI 386


>gi|297538919|ref|YP_003674688.1| hypothetical protein M301_1733 [Methylotenera sp. 301]
 gi|297258266|gb|ADI30111.1| protein of unknown function DUF140 [Methylotenera sp. 301]
          Length = 378

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 5/365 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G W +  +  I + +      +    + + D S +  +D  GA ++         +
Sbjct: 19  LTLSGAWVASTLHNIVEKI--HAIPTTIELNIVADGSGVEALDMSGAWVMQSLFSLLKAQ 76

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +     +    +     +   +  PQ +        L  HIG    + + ++   
Sbjct: 77  GNSITLIGFKPEFVERLKVVTYEFSHHANPQNNIEIKPPT-LLEHIGMATTEALKEAKDL 135

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G V S      A   + +     ++  +   G++ VP+V +++F+ G V+A Q A 
Sbjct: 136 LSFVGEVSSVFLASFADPQRIR--WRPILFNIREAGLNAVPIVGILAFLLGVVVAYQSAD 193

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  +GA IF +DL+ I  LRE   L+ A++IAGRSGSA  A+IG+M + EEIDA+R +G
Sbjct: 194 QLRHYGANIFVVDLIGISMLREFAPLIAAIIIAGRSGSAYAAQIGTMSVTEEIDAMRILG 253

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  + +L+ P++  L ISLPLLT+ A+   I G  +      D+ F  F  R      + 
Sbjct: 254 IAPMEMLVLPKLIGLAISLPLLTVWADMLGIFGGMLTASAQLDVSFVDFVGRLVKAVEMT 313

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
               GL KA   A  I ++   +GF     ++++G++ T  VVQSI +VI+ D+LF++ +
Sbjct: 314 TYTVGLGKAFVFAIIITMIGCFQGFRTKGGADNVGRQTTRSVVQSIFLVIVADALFSVLF 373

Query: 369 FAIGI 373
             + I
Sbjct: 374 SILKI 378


>gi|256828281|ref|YP_003157009.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577457|gb|ACU88593.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
          Length = 380

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 104/363 (28%), Positives = 176/363 (48%), Gaps = 14/363 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65
               G        EI D +               DLS +T +D  GA +I+       K 
Sbjct: 24  LSLRGIIDLRTTPEIMDRLAQL--PLPLPRRIRADLSGVTRMDDCGALVILQLRRMAEKN 81

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
              +K+ G   H+++L   +            PQ      +  +     G K +   N +
Sbjct: 82  GCDLKMHGTPGHVQELLDFLRLDD-------PPQSVGIKRAKPDFMTRFGIKTLDVTNQA 134

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G V+           + +  L   +  M  VGV  +P+V LISF+ G ++A  
Sbjct: 135 VTHVSFVGEVVVTLLSLLRHPDRLR--LGDTVLYMQRVGVDALPIVGLISFLLGLIMAFM 192

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL QFGA I+   L+++  +RE+G ++TA+++AGRSGSA  AEIG+MK++EE+DA+ 
Sbjct: 193 SAVQLQQFGANIYVASLVALAMVRELGPIMTAILVAGRSGSAFAAEIGTMKVSEEVDALV 252

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMG      L++P+I A ++ +PLL + +N  AI G  ++     D+    + ++  +T 
Sbjct: 253 TMGFKPAMFLVAPKIIASVLVVPLLAMYSNLFAIAGGLLIGVTTLDLTVNAYMAQTMNTL 312

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +I  GL K+   A  I  V   +G+ V   + S+G+  T+ VV  I +VI++DS+ A
Sbjct: 313 SIFDINWGLFKSAIFAVLIATVGCFKGYQVRGGAASVGQATTSAVVTGIFLVILVDSILA 372

Query: 366 IFY 368
           +  
Sbjct: 373 VIL 375


>gi|238796784|ref|ZP_04640289.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969]
 gi|238719272|gb|EEQ11083.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969]
          Length = 381

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 119/364 (32%), Positives = 186/364 (51%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +  +V+            I DL+ +  +DT GA L+   + +    
Sbjct: 21  VAARGDWVLAHYRALEPEVMQLRANLPSG--VIFDLNQLGALDTAGATLLALLLGEARVG 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      E+   L+    R          +     +  L  +IG+ +V    D  S 
Sbjct: 79  NLRELAPKLPEERRVLLETVSRVLPDLSPEPSTKAPPFWLELLSNIGRSMVNLWEDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFIGLTLEALLGTLFRPARWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|327190640|gb|EGE57728.1| putative ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 383

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 153/370 (41%), Positives = 227/370 (61%), Gaps = 5/370 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+      R +GNW+S  +  +  D    +++  ++ +  VDLS IT+IDT G  L+   
Sbjct: 17  SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KAGNLTVDLSEITDIDTAGIWLLCRL 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +          +  +++    ++    +P+     +    +   IGK     
Sbjct: 75  KKEEEAAGRTVRFEGTNPHIDEMLAM-FSEEPAKPEPEPKEKVSLAARILAPIGKMTYDV 133

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 134 WDNLAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 191

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI
Sbjct: 192 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 251

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y  I FA F +R 
Sbjct: 252 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARL 311

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           H   TL+ + +G+IKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV++I +VI++D
Sbjct: 312 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMD 371

Query: 362 SLFAIFYFAI 371
            LFA+FY AI
Sbjct: 372 GLFAMFYAAI 381


>gi|82703102|ref|YP_412668.1| hypothetical protein Nmul_A1981 [Nitrosospira multiformis ATCC
           25196]
 gi|82411167|gb|ABB75276.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 378

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 171/370 (46%), Gaps = 12/370 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GI      GN     + E    +   +++   +     DL+ I  +D  GA L+     
Sbjct: 20  DGIPRVIVEGNCTLTALGERIRPIAAELSEYATAPEIRWDLTQIARMDDAGAVLLWRGWG 79

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
               +  L       E+LF  +  T     +    +              +GK +     
Sbjct: 80  NQRPRYLLV--RPEHERLFDRLEETWTPPSEAAPDRLWP--------IMVLGKAVFLLWE 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  ++G ++           +       +   +Y  G   + +  L+ F+ G V++
Sbjct: 130 HLVGLVILMGQLVLEIKYLAGRPSRIP--WREISANLYRTGAQALGITALVGFLIGVVLS 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL  FGA +F ++++ I  +RE+G +L A+++AGRSGS++ A++G M++ EE+DA
Sbjct: 188 YLSSRQLQIFGAHVFIVNILGISVIRELGPMLAAILVAGRSGSSMTAQLGVMRVTEELDA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+     LI P++ AL +++PL+ +  +  A+IG   V      + +  F SR   
Sbjct: 248 LTVMGIPHSLRLILPKVIALGLAMPLVVLWTSAVALIGGMTVAELQLGLGYKFFLSRLPD 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              ++N++ GL K      AI +++   G  +  ++ SLG+  T  VV SI++VIIID++
Sbjct: 308 AVAVSNLWLGLGKGIVCGMAIALISCHFGLRIKSNTESLGEGTTNSVVTSITVVIIIDAI 367

Query: 364 FAIFYFAIGI 373
           FA+ +  +G+
Sbjct: 368 FAVIFSDVGL 377


>gi|154243867|ref|YP_001409440.1| hypothetical protein Xaut_5005 [Xanthobacter autotrophicus Py2]
 gi|154162989|gb|ABS70204.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2]
          Length = 344

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 129/346 (37%), Positives = 193/346 (55%), Gaps = 7/346 (2%)

Query: 26  DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLI 85
                      +    V+LS IT +DT GA L+      +  +  +  VS+   +   L+
Sbjct: 4   RWDAVCAAHADAKVVSVNLSGITRMDTFGAILLERLCGAWEQEGSVPQVSSLDPRYQRLM 63

Query: 86  SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145
               R   +     R       + +   +G ++V    D     + +G V+S  G     
Sbjct: 64  QELERSDSRPHPQTRRS-----EGILERLGHEVVNTAKDGLDLLNFIGAVVSAMGRVAVR 118

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
              F+    S + Q+  VG   VP+++LI+F+ G++IAQQ  F   +FGA+IF +D++ +
Sbjct: 119 PRSFR--FTSTVAQLDRVGFRAVPIILLITFLVGSIIAQQSIFHFRRFGADIFVVDMVGV 176

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
           L LRE+GVL+ ++MIAGRSGSA  AE+GSM++ EE+DA++ MGLD + +L+ PRI ALII
Sbjct: 177 LVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALKVMGLDPIEVLVVPRILALII 236

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
            LPLLT L + +A+IG  +V W Y  I   VF  R      L     G+ KAPFMA AIG
Sbjct: 237 GLPLLTFLGSMAALIGGGLVAWFYGGITPNVFIDRLKQAIDLTQFEVGMYKAPFMAAAIG 296

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +VA  EG  VG  + SLG+  T  VV++I +VI++D LFA+F+ +I
Sbjct: 297 LVACLEGLKVGGSAESLGQHTTASVVKAIFLVIVMDGLFAVFFASI 342


>gi|223040212|ref|ZP_03610491.1| ABC transport system permease [Campylobacter rectus RM3267]
 gi|222878573|gb|EEF13675.1| ABC transport system permease [Campylobacter rectus RM3267]
          Length = 378

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 185/371 (49%), Gaps = 9/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G        +W     ++I      A+  S + D  +++   + E+D   A  +   +
Sbjct: 17  SGGKLAINLKNDWTYKLPAQIWTQ-TAALIGSRKFDKIVLNFKDVKELDYAAALFLKNTL 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +L  ++ H +++F+ I+        N K ++       +N    IGK +  F 
Sbjct: 76  LNARKNYELVNLTPHAQRIFASINSE-----VNPKIKQIINAKPHENPLSQIGKNLAAFF 130

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
              C+  +  G  +    +           +  ++      G+  V +V L SF+ G V+
Sbjct: 131 AGFCAFLNFTGEFLVKFSKIFMLK---NIRVKEILAYFEDAGIKSVFIVCLTSFLIGIVL 187

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG+  L +FGA I  +++M +L LREI  L+ A+++AGR  S+  A+IG MKI EEID
Sbjct: 188 AYQGSNLLERFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEEID 247

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG D  + L+ PR+ ALI+++PL+  LA+ + I G  +V+  Y +I F  + +RF 
Sbjct: 248 AMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNIGFDSYLARFE 307

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GL KAPF    I  +    GF +  ++ S+G   T  VV +I  VI++D+
Sbjct: 308 QEVEIKHLYVGLFKAPFFGVVIAFIGCMRGFQISGNTQSVGTYTTVSVVNAIFGVIMVDA 367

Query: 363 LFAIFYFAIGI 373
           LF++ +  +GI
Sbjct: 368 LFSVIFTHLGI 378


>gi|126462257|ref|YP_001043371.1| hypothetical protein Rsph17029_1489 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103921|gb|ABN76599.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 366

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 109/363 (30%), Positives = 191/363 (52%), Gaps = 9/363 (2%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
             G      + E    +              +D++A+  +DT GA  I+   ++     +
Sbjct: 13  LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 66

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
              +    E    L+       +   + +R        +   ++G+++ + +  S +   
Sbjct: 67  ALEIVNLSESHRHLLETV-AAAMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLTSVG 125

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
             G V+++ G       + K  L  L+  M   G + VP+V L+ F+ G V+A QG+ QL
Sbjct: 126 FFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQL 183

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
             FGAE++ +DL++I  LRE+G+LLTA+++AGRS SA  A IGSMK+ EEIDA+R +GLD
Sbjct: 184 KSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVLGLD 243

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ PR+ AL+I LP L  +A+ + ++G  ++ W    I   +F ++  +   +++ 
Sbjct: 244 PIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDVSHA 303

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF+IF+  
Sbjct: 304 IIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIFFAV 363

Query: 371 IGI 373
            G+
Sbjct: 364 WGL 366


>gi|90417915|ref|ZP_01225827.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337587|gb|EAS51238.1| possible permease protein, ABC-type transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 377

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 138/371 (37%), Positives = 213/371 (57%), Gaps = 3/371 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G  V R +G+W +  +  + D V  A    +     +VD   +  IDT GA L+   +
Sbjct: 10  RDGGLVLRASGDWLARTVGSVEDTVAEAGAADL-GRQVVVDCGDVARIDTAGALLLEKLV 68

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +   +    E+   L     +   + +        N   +L    G+  V   
Sbjct: 69  RGLGANGRDVRLEAVSERDQPLFDVVRKALDRERPQPEKRKTNRILDLVAATGRGSVAVK 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ++     +I+G  +    +      + +    ++  Q+  +G+  VP++ L+SF+ GA+I
Sbjct: 129 DEIVVALNIIGGAMVGGVQRLTGKTQIRP--AAIFAQVEQMGLRAVPIIFLMSFLIGAII 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL +FG E+++++L +IL LREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID
Sbjct: 187 AQQGAFQLRRFGGELYAVNLAAILILREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ + +L+ PR+ AL+I LPLL  +AN + ++GA + +  Y DI FA F     
Sbjct: 247 ALHVIGLNPIGVLVFPRLVALVIVLPLLAFIANLAGLLGAMLTLNIYSDISFASFGQGVQ 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            +  +  +F+G+IKAPFMA  IG++A  EG  VG  + SLG +VT  VV+SI +VI++D 
Sbjct: 307 YSVDMFTVFSGVIKAPFMAVMIGLIASAEGMKVGGSAESLGLRVTASVVKSIFLVILMDG 366

Query: 363 LFAIFYFAIGI 373
           LFAIFY +IG+
Sbjct: 367 LFAIFYASIGL 377


>gi|326388333|ref|ZP_08209929.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207065|gb|EGD57886.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 370

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 108/371 (29%), Positives = 190/371 (51%), Gaps = 13/371 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S        F+G      +  +   +     + I++  A +DL+ +  +DT+GA      
Sbjct: 11  SGENGDTLVFSGPMTVATLGGLDARL-----REIETPIARIDLADVPMMDTVGAWTCWRL 65

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                   ++       E+L   +           +P ++     +  +   +G  +   
Sbjct: 66  SRDTGA--EIVHPCEAAERLIGALEKVD----DGGEPTQAGGLPVWLRVPAKVGDTVFGL 119

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +       G ++  T        +F+    +L+ QM  VGV+ + +V L+SF+ G V
Sbjct: 120 AAGAVEVLGFFGQMLLATWGLLRHPGRFR--FNALVHQMELVGVNALAIVGLMSFLVGIV 177

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA QL QFGAE+++++L+  L LRE+G+L+TA+M+AGRSGSA  A++G+MK+NEEI
Sbjct: 178 IAQQGAVQLRQFGAEVYTVNLVGRLTLRELGILMTAIMVAGRSGSAFAAQLGTMKLNEEI 237

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RT+G+  +  L+ PRI A ++ LP+L + +    IIG + +     DIPF  F +R 
Sbjct: 238 DAMRTIGVSPMEALVLPRILATVLMLPVLGVYSAVVGIIGGAFLSSLTLDIPFFSFLARI 297

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + +++ GL K P     + +    +G  V  ++  +G + T+ VV +I  VI++D
Sbjct: 298 REVVPVHDVWVGLFKGPVFGLIVSVAGCYQGMQVKANAEEVGLRTTSAVVMAIFTVIVLD 357

Query: 362 SLFAIFYFAIG 372
           + FA+F+  +G
Sbjct: 358 AFFAVFFTEVG 368


>gi|296445994|ref|ZP_06887944.1| protein of unknown function DUF140 [Methylosinus trichosporium
           OB3b]
 gi|296256512|gb|EFH03589.1| protein of unknown function DUF140 [Methylosinus trichosporium
           OB3b]
          Length = 382

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 129/369 (34%), Positives = 206/369 (55%), Gaps = 5/369 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +     F  AG+W      +I       +     +  A+VDL  ++ +DT GA +I   +
Sbjct: 17  DGAAVSFALAGDWVLAAAMDIERAAEKMVADGRGATRAVVDLVHVSRLDTAGAWVIGRAL 76

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++         V     +   L+   H ++ +          +   ++   +G+ +V   
Sbjct: 77  DELARAGVEASVEGARPEHELLLREAHFRRFET---DSRPRSSLCIDILADLGRSVVTAG 133

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D+ + A  LG  ++ TG   A + +F+    S +  +   G+  VP++ LI+ + GA++
Sbjct: 134 RDAFAGAVFLGEFVAVTGRAVAIARRFR--FTSFVYHLENFGLRSVPIIALINLLVGAIV 191

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG FQL +FGA  +++DL+ +L LRE+GVLL+++MIAGRSGSAI AE+GSMK+ EEID
Sbjct: 192 AQQGIFQLRRFGASTYAVDLIGVLVLRELGVLLSSIMIAGRSGSAITAELGSMKMREEID 251

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MGL  +  L++PRI AL++++PLL  +A+ SA+ G  +V W Y  I    +     
Sbjct: 252 ALRVMGLSPMDALVTPRILALVVAMPLLAFIADMSALFGGLLVCWGYEGISPVAYLEWLQ 311

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +         G+IKAPFMA  IGIV+  EG +    + SLG+ VT  VV+SI +VI++D 
Sbjct: 312 AAIGRNTFMVGIIKAPFMAFTIGIVSAMEGMSTKGSAESLGRHVTAAVVKSIFMVIVLDG 371

Query: 363 LFAIFYFAI 371
           LFAIF+ +I
Sbjct: 372 LFAIFFASI 380


>gi|311232876|gb|ADP85730.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1]
          Length = 401

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 118/371 (31%), Positives = 197/371 (53%), Gaps = 8/371 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               + RF+G W     +     +   +    +      DL+ +  +DT GA +I  F  
Sbjct: 38  GNTGILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF-- 94

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                ++ QG++  +    +  +   R   I   +       ++       IG  IV+  
Sbjct: 95  --RTALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEET 152

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             +      +G+++ +        ++F+   +SL   M   GV  VP+V L+SF+ G V 
Sbjct: 153 EQAVGILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVT 210

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ 
Sbjct: 211 AYMGAEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVS 270

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH
Sbjct: 271 AMRALGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFH 330

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++
Sbjct: 331 EIVHLRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNA 390

Query: 363 LFAIFYFAIGI 373
           LFAI + ++G+
Sbjct: 391 LFAILFTSLGV 401


>gi|94263506|ref|ZP_01287318.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456144|gb|EAT06287.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 379

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 11/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L+++F
Sbjct: 19  SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                   +   V         +         + +            +    +G+  V  
Sbjct: 77  SRLMQDSNRPVEVRGLRPDFRHIQEQIDCFDYRPKP------LQRRLSAVEELGRAAVNL 130

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D       +G  +S+     A     +     ++  M  VG   V ++ L+ F+ G +
Sbjct: 131 GRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLIGVI 188

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IA Q A  L  FGAE+F   L+ +  +RE+G L+TA+++AGRSGSA  AEIG+MK NEEI
Sbjct: 189 IAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTNEEI 248

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           +A++TMGL+ VR L+ PR+ A ++  PLL +     + IG ++V+    D     +  + 
Sbjct: 249 NALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYVHQL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++  +A+   G++K    +  +  V    G   G  ++++G+  T+ VV +I ++I+ D
Sbjct: 308 STSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILIILAD 367

Query: 362 SLFAIFYFAIGI 373
            +FA+ Y+ +GI
Sbjct: 368 GIFAVVYYMLGI 379


>gi|255322244|ref|ZP_05363390.1| ABC transport system permease [Campylobacter showae RM3277]
 gi|255300617|gb|EET79888.1| ABC transport system permease [Campylobacter showae RM3277]
          Length = 378

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 108/371 (29%), Positives = 183/371 (49%), Gaps = 9/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G        NW     ++I      A+  S + +  +++   I E+D   A       
Sbjct: 17  SGGKLTINLKNNWNYKLPAQIWTQ-TAALIGSKKFNKIVLNFKEIKELDYAAALFFKNTF 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +L  ++ H +++F+ I+        N K ++       +N    IGK +  F 
Sbjct: 76  LNACKNYELVNLTPHAQKIFASINSE-----INPKIKQIIDAKPHENPFSQIGKNLTAFF 130

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
              C+  +  G  +    +           +  ++      G+  V +V L SF+ G V+
Sbjct: 131 AGFCAFLNFTGEFLVKFSKIFMLK---NIRVKEILAYFEDAGIKSVFIVCLTSFLIGIVL 187

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG+  L  FGA I  +++M +L LREI  L+ A+++AGR  S+  A+IG MKI EEID
Sbjct: 188 AYQGSNLLESFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEEID 247

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG D  + L+ PR+ ALI+++PL+  LA+ + I G  +V+  Y +I F  + +RF 
Sbjct: 248 AMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNISFDSYLARFS 307

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + +++ GL KAPF    I  +    GF +G ++ S+G   T  VV +I  VI++D+
Sbjct: 308 QEVDIKHLYVGLFKAPFFGIVIAFIGCMRGFQIGGNTQSVGTYTTVSVVNAIFGVIMVDA 367

Query: 363 LFAIFYFAIGI 373
           LF+I +  +GI
Sbjct: 368 LFSIIFTQLGI 378


>gi|256061111|ref|ZP_05451265.1| hypothetical protein Bneo5_12197 [Brucella neotomae 5K33]
 gi|261325112|ref|ZP_05964309.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261301092|gb|EEY04589.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 391

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LP LTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPPLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|153009437|ref|YP_001370652.1| hypothetical protein Oant_2107 [Ochrobactrum anthropi ATCC 49188]
 gi|151561325|gb|ABS14823.1| protein of unknown function DUF140 [Ochrobactrum anthropi ATCC
           49188]
          Length = 391

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 151/369 (40%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G    R +G W S  +  + DD + ++ K+ +  + I+D+S ++ +DT GA LI    
Sbjct: 24  QDGARHIRLSGRWVSQSV-NLVDDKMRSLEKTDEHKATIIDVSGVSGLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    +    L+    +   +     R      F +    +G  ++   
Sbjct: 83  QRLVAKSADAQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFFISFLAALGGGVISMG 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P++IL+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGSGIPI--AAIVTQMDRMGVGAIPIIILMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTI+++ +A+IGA  V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVVLPLLTIISDLAALIGAGGVAWFYSNISPDAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|221069470|ref|ZP_03545575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220714493|gb|EED69861.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 375

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 10/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +G       G W + E+ +      +A            DL  +  +D IGA+L+   
Sbjct: 14  SRDGQQWAVPVGRWSAAELGDRHIWRRLAPQIRAVPKGVAWDLQQMVWLDHIGAQLLWEQ 73

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +      L   +          S   R    ++ P+     + +      +G+ ++  
Sbjct: 74  WGRTWPARLLTTKNQR--------SMLERVARFSEVPEAKPEPSGWMCEVNRLGQMVIDA 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +   ++G ++ +      +   F+G    +   +Y  G + +P+  L+ F+ G V
Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--FRGPWRDISGHLYATGATALPITALVGFLIGVV 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   A QL QFGAE F ++++ I  +RE+G LL A+++AGRSGSAI A+IG M++ EE+
Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+     L+ PR  AL +S+PL+ +    +A+ G  +      DI  + F    
Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFIQSL 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   + N+   + K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D
Sbjct: 304 PAAVKIGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363

Query: 362 SLFAIFYFAIG 372
           ++FAI +  +G
Sbjct: 364 AIFAILFRNVG 374


>gi|188580085|ref|YP_001923530.1| hypothetical protein Mpop_0817 [Methylobacterium populi BJ001]
 gi|179343583|gb|ACB78995.1| protein of unknown function DUF140 [Methylobacterium populi BJ001]
          Length = 382

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 136/373 (36%), Positives = 205/373 (54%), Gaps = 12/373 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G       G W + +     +     I    +    +VDLS +  +DT+GA ++    
Sbjct: 18  DAGDGRVILHGRWTADQ-GPAVESASARIAAQGRRQPVLVDLSGLARLDTLGAWVLERTR 76

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
              E   G++   G       L   +        +  +P      N    L    G+++ 
Sbjct: 77  AEIEAAGGRLAYAGARPEHRILLGEMGL------REPEPAPRDARNPVVRLLDGTGRRVA 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +  N+  S    LG V++  G        F+    +L+ Q+  V + GVP+++LISF+ G
Sbjct: 131 RGGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLVG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ E
Sbjct: 189 GIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMRE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +
Sbjct: 249 EVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTVDAFLA 308

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R  +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI+
Sbjct: 309 RLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIV 368

Query: 360 IDSLFAIFYFAIG 372
           +D LFA+F+ AI 
Sbjct: 369 LDGLFAVFFAAID 381


>gi|254714105|ref|ZP_05175916.1| Sulfate transporter/antisigma-factor [Brucella ceti M644/93/1]
 gi|254716838|ref|ZP_05178649.1| Sulfate transporter/antisigma-factor [Brucella ceti M13/05/1]
 gi|261218640|ref|ZP_05932921.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261321862|ref|ZP_05961059.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260923729|gb|EEX90297.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294552|gb|EEX98048.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 391

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++GI V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGIRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+G LLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGGLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|225627497|ref|ZP_03785534.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo]
 gi|260168729|ref|ZP_05755540.1| Sulfate transporter/antisigma-factor [Brucella sp. F5/99]
 gi|261758207|ref|ZP_06001916.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99]
 gi|225617502|gb|EEH14547.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo]
 gi|261738191|gb|EEY26187.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99]
          Length = 391

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM   GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRTGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|170734244|ref|YP_001766191.1| hypothetical protein Bcenmc03_2910 [Burkholderia cenocepacia MC0-3]
 gi|169817486|gb|ACA92069.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3]
          Length = 374

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +   
Sbjct: 19  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 79  AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|94263144|ref|ZP_01286962.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456515|gb|EAT06629.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 379

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 11/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L+++F
Sbjct: 19  SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                       +         +     R    ++  QR        +    +G+  V  
Sbjct: 77  SRLMQDGNLPVEIRGLHPDFRHIQEQISRFDCHSKPAQRR------LSAVEELGRAAVNL 130

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D       +G  +S+     A     +     ++  M  VG   V ++ L+ F+ G +
Sbjct: 131 GRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLIGVI 188

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IA Q A  L  FGAE+F   L+ +  +RE+G L+TA+++AGRSGSA  AEIG+MK NEEI
Sbjct: 189 IAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTNEEI 248

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           +A++TMGL+ VR L+ PR+ A ++  PLL +     + IG ++V+    D     +  + 
Sbjct: 249 NALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYVHQL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++  +A+   G++K    +  +  V    G   G  ++++G+  T+ VV +I ++I+ D
Sbjct: 308 STSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILIILAD 367

Query: 362 SLFAIFYFAIGI 373
            +FA+ Y+ +GI
Sbjct: 368 GIFAVVYYMLGI 379


>gi|194364302|ref|YP_002026912.1| hypothetical protein Smal_0524 [Stenotrophomonas maltophilia
           R551-3]
 gi|194347106|gb|ACF50229.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia
           R551-3]
          Length = 373

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 111/365 (30%), Positives = 188/365 (51%), Gaps = 13/365 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G W        A+ +     + +      +D + I ++D+ G   ++    +   
Sbjct: 21  LIRLSGTWTLKTALAAAEVL-----RDVPDTLTGIDATGIEKMDSAGVLQVLRVAHRADL 75

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                      + L   I      + K +                 +G  +    ++  +
Sbjct: 76  GEDALQFRPDHQALVCTIEEVADDRPKPK------RDFGVLAALERLGVSVHATGHNIKA 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA  G+
Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA+RT+
Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + +L+ PR++AL+++LPLLT +A  + + G   V     DIP  ++ +R H T  +
Sbjct: 248 GLDPIDLLVLPRLFALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHDTMEV 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+  A++
Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367

Query: 368 YFAIG 372
           +  + 
Sbjct: 368 FMHMD 372


>gi|268678744|ref|YP_003303175.1| hypothetical protein Sdel_0102 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616775|gb|ACZ11140.1| protein of unknown function DUF140 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 376

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 13/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G +V    G W    +  +         K     S   D S+I   DT G  L+++ 
Sbjct: 12  NSEGFSVI-VRGKWVKESVPLLQSAFTSLTCK--PHASYTFDFSSIETFDTHGIMLLLHH 68

Query: 62  MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           ++K   +   ++  G S   + LFS+    +  ++   K +         +   ++G+ +
Sbjct: 69  IKKLEKEYCIVQTTGASDAFKTLFSICQTHYPHEVPRPKKE-----RMVLSFLENVGRTM 123

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           ++      S     G +    G         +  L + +  +   G   +P+++L SF+ 
Sbjct: 124 MEGYKTLASFFSFTGELSHAIGALFFKPANIR--LKATLYHIEQSGAGAIPIILLTSFLI 181

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G VIA QGA QL +FGA IF +++++I  +RE+  LLTA+++AGRS S+  A+IG MK+ 
Sbjct: 182 GVVIAYQGASQLEKFGANIFIVEMITISAVRELAPLLTAIVVAGRSASSYTAQIGVMKLT 241

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+ +MG      L+ PR++ALIISLPLL   A+  +  G  ++     D+ F  F 
Sbjct: 242 DEIDAMSSMGFSPWNFLVLPRLFALIISLPLLVFFADVVSTFGGMVIASTRLDVSFVEFI 301

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            R   T  L ++  GL+KAP   C I  +    GF +  ++ S+GK  T  VV +I  VI
Sbjct: 302 DRIKETVALKHLVIGLVKAPIFGCIIATIGCFRGFQITSNTESVGKYTTISVVNAIFWVI 361

Query: 359 IIDSLFAIFYFAI 371
            +D+L ++F   +
Sbjct: 362 AMDALISVFLTEL 374


>gi|160895814|ref|YP_001561396.1| hypothetical protein Daci_0365 [Delftia acidovorans SPH-1]
 gi|160361398|gb|ABX33011.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1]
          Length = 376

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 179/372 (48%), Gaps = 11/372 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +N        G+W + E+   A    + A     + D    +L  +  +D +GA+L+   
Sbjct: 15  DNDGQWALLTGSWGAAELGRRAQWRKLRAQLADAKGDDLGWNLEGLDWLDHVGAQLLWNH 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +         +   +    +  +   R    +++P       +       +G  ++  
Sbjct: 75  WGRR--------LPARLAASDAQRAMLERVGRFSKEPAPPPPRLNLLERIDSLGCLVINA 126

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    ++G ++ +   F  + +  +G    +   +Y +G + +P+  L+ F+ G V
Sbjct: 127 CGHFAQMTRLIGQLLIDLLRFARAPH--RGPWRDISGHLYSMGATALPITALVGFLIGVV 184

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   A QL QFGAE F ++++ I  +RE+G LL A+++AGR+GSAI A+IG M++ EE+
Sbjct: 185 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRTGSAITAQIGVMRVTEEL 244

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+     L+ PR  AL I++PL+++    +A+ G  +       +  A F    
Sbjct: 245 DAMQVMGIPHGFRLVLPRALALAIAMPLVSLWTTLAALAGGMLAADLTMGVTGAYFAEAL 304

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   + N++  + K+      I ++    G  V  ++ SLGK  T  VV +I++VI++D
Sbjct: 305 PAAVKIGNLWIAMGKSVVFGALIALIGCHWGLRVEPNTQSLGKGTTASVVTAITMVIVVD 364

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +GI
Sbjct: 365 AIFAILFKDVGI 376


>gi|300917987|ref|ZP_07134613.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300414813|gb|EFJ98123.1| conserved hypothetical protein [Escherichia coli MS 115-1]
          Length = 381

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 180/364 (49%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +   V             + DL+ +  +DT GA L+   + +    
Sbjct: 21  VYIRGDWVLAHYCVLEPRVAQLRANMPSGG--VFDLNQLGALDTAGATLLALLLGEDRVA 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      E+   L+                     +  +  + G+ +     D  S 
Sbjct: 79  NLRELAPKLPEERRILLETVSHVLPDLTPELSEKPTRFWLEMLANTGRSVDNLWQDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFIGLALETLLGTLFRPSRWRI--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|46579026|ref|YP_009834.1| STAS domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448439|gb|AAS95093.1| STAS domain protein [Desulfovibrio vulgaris str. Hildenborough]
          Length = 406

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 118/371 (31%), Positives = 197/371 (53%), Gaps = 8/371 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               + RF+G W     +     +   +    +      DL+ +  +DT GA +I  F  
Sbjct: 43  GNTGILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF-- 99

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                ++ QG++  +    +  +   R   I   +       ++       IG  IV+  
Sbjct: 100 --RTALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEET 157

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             +      +G+++ +        ++F+   +SL   M   GV  VP+V L+SF+ G V 
Sbjct: 158 EQAVGILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVT 215

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ 
Sbjct: 216 AYMGAEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVS 275

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH
Sbjct: 276 AMRALGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFH 335

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++
Sbjct: 336 EIVHLRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNA 395

Query: 363 LFAIFYFAIGI 373
           LFAI + ++G+
Sbjct: 396 LFAILFTSLGV 406


>gi|238789963|ref|ZP_04633742.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC
           33641]
 gi|238721911|gb|EEQ13572.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC
           33641]
          Length = 381

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W     S +  +V         +   I DL+ +  +DT GA L+   +      
Sbjct: 21  VSVKGDWVLAHYSVLEPEVTQLRANLPHA--VIFDLNQLGALDTAGATLLALLLGDERIN 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      ++   L+          +        + +  L  + G+ +     D  S 
Sbjct: 79  KLRELAPKLPQERRVLLETVSHVLPGLEPESSEKPPSFWLELLANTGRSMDNLWQDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFVGLTLEALFGTVFRPSRWRV--TSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     +I   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLNISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|298530599|ref|ZP_07018001.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509973|gb|EFI33877.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 379

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 176/370 (47%), Gaps = 11/370 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            GI      G  ++  I  +  ++   + K+      ++D+  +  +D  G  L+++F  
Sbjct: 21  EGILHAVVRGRMEAGSIGPLWKELASKLKKNRAG--LVLDVEKVDYMDMSGQALLLHFSR 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +   +     V     +L  +         + +  QR        +    +G+  V    
Sbjct: 79  QMQDRNLSVEVRGLRPELREIQEEIDCFDCRPRPMQRK------LSALEELGRAAVNLGR 132

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D+      +G  +S+           +     ++  M  VG   V ++ L+ F+ G +IA
Sbjct: 133 DTRQFFSFVGEFVSSFAYSLTHPGTVR--WKDVLSHMEAVGGRAVFIIALMGFLIGVIIA 190

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A  L  FGAEIF   L+ +  +RE+G L+T++++AGRSGSA  AEIG+MK NEEI+A
Sbjct: 191 FQTAITLRAFGAEIFVAKLLGLSIVRELGPLVTSIILAGRSGSAFAAEIGTMKTNEEINA 250

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TMGL  VR L+ PR+ A ++  PLL I     + IG ++V+    D     +  +  +
Sbjct: 251 LQTMGLSPVRFLVVPRMLAAMLVTPLLCIFFLLFSFIGGALVM-LSMDFTLTTYIHQLKT 309

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +  + +    ++K    +  +  +    G   G  ++++G+  T+ VV +I ++I+ D +
Sbjct: 310 SVGMTDFLGSMVKVFVFSILVAWIGCVRGLQTGSGASAVGRSTTSAVVSAIVLIILADGI 369

Query: 364 FAIFYFAIGI 373
           FA+ Y+ +GI
Sbjct: 370 FAVVYYMLGI 379


>gi|238791990|ref|ZP_04635626.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909]
 gi|238728621|gb|EEQ20139.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909]
          Length = 381

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 114/364 (31%), Positives = 180/364 (49%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +   V             + DL+ +  +DT GA L+   + +    
Sbjct: 21  VYIRGDWVLAHYCVLEPRVAQLRANMPSGG--VFDLNQLGALDTAGATLLALLLGEDRVA 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      E+   L+                     +  +  + G+ +     D  S 
Sbjct: 79  NLRELAPKLPEERRILLETVSHVLPDLTPELSEKPARFWLEMLANTGRSVDNLWQDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFIGLALETLLGTLFRPSRWRI--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|120603385|ref|YP_967785.1| hypothetical protein Dvul_2342 [Desulfovibrio vulgaris DP4]
 gi|120563614|gb|ABM29358.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4]
          Length = 406

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 118/371 (31%), Positives = 196/371 (52%), Gaps = 8/371 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               + RF+G W     +     +   +    +      DL+ +  +DT GA +I  F  
Sbjct: 43  GNTGILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF-- 99

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                ++ QG++  +    +  +   R   I   +       ++       IG  IV+  
Sbjct: 100 --RTALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEET 157

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             +      +G+ + +        ++F+   +SL   M   GV  VP+V L+SF+ G V 
Sbjct: 158 EQAVGILAFMGMFVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVT 215

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA Q ++FGA++F I+L+ I  LRE+GVLLTA+++AGRSGS+  A+IG+M  NEE+ 
Sbjct: 216 AYMGAEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVS 275

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +GLD + +L+ PR+ AL++ LP+L  +A+   I+G  +  W    I  A F +RFH
Sbjct: 276 AMRALGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFH 335

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L N   G+IKAPF A  I +V   +GF V   + S+G+  T  VV++I +VI++++
Sbjct: 336 EIVQLRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNA 395

Query: 363 LFAIFYFAIGI 373
           LFAI + ++G+
Sbjct: 396 LFAILFTSLGV 406


>gi|17987248|ref|NP_539882.1| toluene tolerance protein Ttg2B [Brucella melitensis bv. 1 str.
           16M]
 gi|17982923|gb|AAL52146.1| toluene tolerance protein ttg2b [Brucella melitensis bv. 1 str.
           16M]
          Length = 390

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 23  QDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 81

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 82  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 141

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 142 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 199

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 200 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 259

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 260 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 319

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 320 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 379

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 380 LFAMFYAAI 388


>gi|189024185|ref|YP_001934953.1| Sulfate transporter/antisigma-factor [Brucella abortus S19]
 gi|189019757|gb|ACD72479.1| Sulfate transporter/antisigma-factor [Brucella abortus S19]
          Length = 390

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 23  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 81

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 82  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 141

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 142 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 199

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 200 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 259

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 260 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 319

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 320 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 379

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 380 LFAMFYAAI 388


>gi|134096148|ref|YP_001101223.1| putative transmembrane protein [Herminiimonas arsenicoxydans]
 gi|133740051|emb|CAL63102.1| Conserved hypothetical protein, putative ABC transporter
           [Herminiimonas arsenicoxydans]
          Length = 374

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 13/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIA--DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           N       AG+W+   ++       +   +  + ++++   DLS IT +D IGA+L+   
Sbjct: 14  NDNATATAAGSWQVRALAAPETMAAITAVLQTAGKAETVHWDLSQITALDYIGAQLLWNA 73

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             K         ++      F  +  T   + K    +  +   S   L +         
Sbjct: 74  WGKKRPAQLT--LAPQHADFFLRLEQTGPLEWKKPPQKYWYSLTSLLQLKH-------NI 124

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           ++       ++G +  + G F       +G    +   +++ G   + +  L+ F+ G V
Sbjct: 125 LDHLLGFISLIGQLTMDIGRFAREPQ--RGPWKEISANIFHAGYQALGITALVGFLIGVV 182

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL QFG ++F ++++ +  +RE+G LL A+++AGRSGS+I A++G M++ EE+
Sbjct: 183 LSYLSAQQLHQFGGDVFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEEL 242

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MGL     L+ P++ AL I++PLL +  +  A+IG          + +  F    
Sbjct: 243 DAMLVMGLPHGYRLVMPKVIALAIAMPLLVVWTDAMALIGGMAAANLELGLSYKYFIREL 302

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                LAN + GL K       I +VA   G  +  ++ SLG   T  VV +I+IVI+ D
Sbjct: 303 PDAVPLANYWIGLGKGVVFGALIALVACHFGLRIKPNTESLGAGTTISVVSAITIVILAD 362

Query: 362 SLFAIFYFAIG 372
           +LFAI +  +G
Sbjct: 363 ALFAIIFSKVG 373


>gi|254689249|ref|ZP_05152503.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 6 str.
           870]
 gi|260754755|ref|ZP_05867103.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260674863|gb|EEX61684.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
          Length = 391

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|317181149|dbj|BAJ58935.1| hypothetical protein HPF32_1353 [Helicobacter pylori F32]
          Length = 377

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  + S  Y     +   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKESKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|238751983|ref|ZP_04613468.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380]
 gi|238709817|gb|EEQ02050.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380]
          Length = 381

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W      E+   V             + DL+ +  +DT GA L+   + +    
Sbjct: 21  VSAKGDWVLVHYRELEPQVAQLRANLPHG--VVFDLNQLGALDTAGAALLAVLLGEERIS 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      ++   L+    +     +          +  L    G+ +     D  S 
Sbjct: 79  HLRELAPNLPQERRVLLETVSQVLPNIEPESTEKPPAFWLELLAGTGRTVDNLWQDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFVGLTLETLLGTLFRPSRWRV--TSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     +I   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALELNISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G+  TT VVQSI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGEHTTTSVVQSIFVVILLDAIAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|163843287|ref|YP_001627691.1| hypothetical protein BSUIS_A1062 [Brucella suis ATCC 23445]
 gi|163674010|gb|ABY38121.1| protein of unknown function DUF140 [Brucella suis ATCC 23445]
          Length = 391

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY  I
Sbjct: 381 LFAMFYATI 389


>gi|225852524|ref|YP_002732757.1| hypothetical protein BMEA_A1060 [Brucella melitensis ATCC 23457]
 gi|256044678|ref|ZP_05447582.1| hypothetical protein Bmelb1R_09298 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256113572|ref|ZP_05454392.1| hypothetical protein Bmelb3E_12477 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256263986|ref|ZP_05466518.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2
           str. 63/9]
 gi|260564024|ref|ZP_05834510.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1
           str. 16M]
 gi|265991102|ref|ZP_06103659.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994939|ref|ZP_06107496.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|225640889|gb|ACO00803.1| protein of unknown function DUF140 [Brucella melitensis ATCC 23457]
 gi|260154040|gb|EEW89132.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1
           str. 16M]
 gi|262766052|gb|EEZ11841.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001886|gb|EEZ14461.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094130|gb|EEZ18052.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2
           str. 63/9]
 gi|326409040|gb|ADZ66105.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326538749|gb|ADZ86964.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 391

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|23501899|ref|NP_698026.1| toulene ABC transporter permease [Brucella suis 1330]
 gi|62289942|ref|YP_221735.1| toulene ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|82699870|ref|YP_414444.1| sulfate transporter [Brucella melitensis biovar Abortus 2308]
 gi|237815443|ref|ZP_04594441.1| toulene ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|254697384|ref|ZP_05159212.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254706786|ref|ZP_05168614.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis
           M163/99/10]
 gi|254730282|ref|ZP_05188860.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 4 str.
           292]
 gi|256031600|ref|ZP_05445214.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis
           M292/94/1]
 gi|256159738|ref|ZP_05457485.1| Sulfate transporter/antisigma-factor [Brucella ceti M490/95/1]
 gi|256255000|ref|ZP_05460536.1| Sulfate transporter/antisigma-factor [Brucella ceti B1/94]
 gi|256257499|ref|ZP_05463035.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 9 str.
           C68]
 gi|256369443|ref|YP_003106951.1| toluene ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
 gi|260545309|ref|ZP_05821050.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038]
 gi|260757978|ref|ZP_05870326.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260761801|ref|ZP_05874144.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883775|ref|ZP_05895389.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261222188|ref|ZP_05936469.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314254|ref|ZP_05953451.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|265988688|ref|ZP_06101245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265998152|ref|ZP_06110709.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|297248343|ref|ZP_06932061.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196]
 gi|23347840|gb|AAN29941.1| toulene ABC transporter, permease protein, putative [Brucella suis
           1330]
 gi|62196074|gb|AAX74374.1| hypothetical toulene ABC transporter, permease protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82615971|emb|CAJ10994.1| Sulfate transporter/antisigma-factor antagonist STAS:Protein of
           unknown function DUF140 [Brucella melitensis biovar
           Abortus 2308]
 gi|237790280|gb|EEP64490.1| toulene ABC transporter, permease protein [Brucella abortus str.
           2308 A]
 gi|255999603|gb|ACU48002.1| toluene ABC transporter, permease protein, putative [Brucella
           microti CCM 4915]
 gi|260096716|gb|EEW80591.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038]
 gi|260668296|gb|EEX55236.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260672233|gb|EEX59054.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260873303|gb|EEX80372.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260920772|gb|EEX87425.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261303280|gb|EEY06777.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262552620|gb|EEZ08610.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264660885|gb|EEZ31146.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|297175512|gb|EFH34859.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196]
          Length = 391

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|294852390|ref|ZP_06793063.1| ABC transport system permease [Brucella sp. NVSL 07-0026]
 gi|294820979|gb|EFG37978.1| ABC transport system permease [Brucella sp. NVSL 07-0026]
          Length = 391

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 153/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+++L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIIVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|306840506|ref|ZP_07473265.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2]
 gi|306843893|ref|ZP_07476488.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1]
 gi|306275648|gb|EFM57372.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1]
 gi|306289521|gb|EFM60739.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2]
          Length = 391

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 152/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G  V   +G+W S  + ++ DD +  I ++    +  +D+S I+ +DT GA LI    
Sbjct: 24  QDGARVIHLSGHWISQSV-QLVDDKMRGIEQAGGDKATTIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           +FA+FY AI
Sbjct: 381 MFAMFYAAI 389


>gi|330861182|emb|CBX71439.1| hypothetical protein YEW_CA08640 [Yersinia enterocolitica W22703]
          Length = 381

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +   V     ++ Q  S + DL+ +  +DT GA L+   +      
Sbjct: 21  VSIKGDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERIN 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      E+  +L+    R              + +     + G+ +     D  S 
Sbjct: 79  HLRELAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFVGLTLEALFSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|161618971|ref|YP_001592858.1| hypothetical protein BCAN_A1034 [Brucella canis ATCC 23365]
 gi|254704312|ref|ZP_05166140.1| hypothetical protein Bsuib36_10354 [Brucella suis bv. 3 str. 686]
 gi|260566441|ref|ZP_05836911.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40]
 gi|261754981|ref|ZP_05998690.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|161335782|gb|ABX62087.1| protein of unknown function DUF140 [Brucella canis ATCC 23365]
 gi|260155959|gb|EEW91039.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40]
 gi|261744734|gb|EEY32660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
          Length = 391

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F S  H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISHLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|328543112|ref|YP_004303221.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
 gi|326412858|gb|ADZ69921.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 381

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 127/371 (34%), Positives = 202/371 (54%), Gaps = 6/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +        +G+W      +    +   +  +    +  +DLS I+ +DT GA L+    
Sbjct: 17  DGDRLAVALSGDWTIHTAMDAEAAL--GVIDTSDVGTVRIDLSGISVLDTSGAWLLHRMR 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +         ++    +   L+S           P+   +  S  ++    G+ +V   
Sbjct: 75  GRIEFAGVRVILTGVAPKYELLLSEVDAHHPPPWSPE--RYRYSIVSVLETTGRHVVDAG 132

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D  +  HILG +            + +G   S+  Q     +  VP++ L+SF+ GA+I
Sbjct: 133 KDLVAMMHILGSLSVVVAGVLFRPGRLRGI--SIAVQFDKSCIGAVPIIALMSFLIGAII 190

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F L QFGA++F +DL  +L LREIGVLLTA+M+AGRSGSA  AE+GSMK+ EEID
Sbjct: 191 AQQGGFYLRQFGADLFVVDLAGVLVLREIGVLLTAIMVAGRSGSAFTAELGSMKMQEEID 250

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL    +LI PR+ AL++++P+LT +++ +A+ G+ +V W Y  IP A + +R  
Sbjct: 251 ALHVIGLSVTEVLILPRLLALMVAMPVLTFVSDIAALFGSGLVTWSYLGIPPAAYMARLE 310

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              +      G++KAPFMA  IG++A  EG  VG  ++SLG+  T  VV++I +VI++D 
Sbjct: 311 EAISFQTFLVGMVKAPFMALIIGLIACVEGLKVGGSADSLGRHTTMSVVKAIFLVIVVDG 370

Query: 363 LFAIFYFAIGI 373
           LFAIF+ AI +
Sbjct: 371 LFAIFFAAIDV 381


>gi|317178170|dbj|BAJ55959.1| hypothetical protein HPF16_1362 [Helicobacter pylori F16]
          Length = 377

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKEGKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|254701770|ref|ZP_05163598.1| Sulfate transporter/antisigma-factor [Brucella suis bv. 5 str. 513]
 gi|261752323|ref|ZP_05996032.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261742076|gb|EEY30002.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 391

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V   Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSCLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|254693733|ref|ZP_05155561.1| hypothetical protein Babob3T_03544 [Brucella abortus bv. 3 str.
           Tulya]
 gi|261214007|ref|ZP_05928288.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260915614|gb|EEX82475.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 391

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLAALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|94309017|ref|YP_582227.1| hypothetical protein Rmet_0072 [Cupriavidus metallidurans CH34]
 gi|93352869|gb|ABF06958.1| ABC transporter, inner membrane subunit [Cupriavidus metallidurans
           CH34]
          Length = 376

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 14/368 (3%)

Query: 9   FRFAGNWKSPEISEIADDV---VMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +  G W +  ++   +           S     A   L  IT +D IGA+LI      +
Sbjct: 20  VQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDGITRLDHIGAQLIWQAWNGH 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                          L         +    +            N    +G  ++ F+   
Sbjct: 80  M---------PDNVSLNDGQKRVFARIAGLRTEGWKKHMVERFNPVTIVGASVLSFLAQL 130

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG ++ +   F  +    +G    +   +Y VG   + +  L++F+ G V++  
Sbjct: 131 GVGVTMLGQLVFDLLRFLRAPQ--RGPWREISANIYNVGYKALGITALVAFLIGIVLSYL 188

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  F ++++ +  +RE+G +L A++IAGRSGSAI A+IG M++ EE+DA+ 
Sbjct: 189 SANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEELDAMS 248

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     L+ PR+ AL IS+PLL    +  A+ G  +      DI +  F  +     
Sbjct: 249 VMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYFLRQLPDAV 308

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN++ GL K       I + A   G  V  ++ SLG+  T  VV SI++VII D++FA
Sbjct: 309 PVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVVIIADAVFA 368

Query: 366 IFYFAIGI 373
           I +  IGI
Sbjct: 369 ILFKDIGI 376


>gi|153951693|ref|YP_001398923.1| ABC transporter permease [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939139|gb|ABS43880.1| putative ABC transporter, permease protein [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 369

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 114/369 (30%), Positives = 187/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   + EIDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKEIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL+KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSAGI 369


>gi|221639257|ref|YP_002525519.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides
           KD131]
 gi|221160038|gb|ACM01018.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           KD131]
          Length = 356

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 109/363 (30%), Positives = 191/363 (52%), Gaps = 9/363 (2%)

Query: 11  FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
             G      + E    +              +D++A+  +DT GA  I+   ++     +
Sbjct: 3   LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 56

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
              +    E    L+       +   + +R        +   ++G+++ + +  S +   
Sbjct: 57  ALEIVNLSESHRHLLETV-AAAMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLTSVG 115

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
             G V+++ G       + K  L  L+  M   G + VP+V L+ F+ G V+A QG+ QL
Sbjct: 116 FFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQL 173

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
             FGAE++ +DL++I  LRE+G+LLTA+++AGRS SA  A IGSMK+ EEIDA+R +GLD
Sbjct: 174 KSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVLGLD 233

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ PR+ AL+I LP L  +A+ + ++G  ++ W    I   +F ++  +   +++ 
Sbjct: 234 PIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDVSHA 293

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             GL+KAPF A  I ++   +G  V  ++ SLG   +  VVQ+I +VI++D+LF+IF+  
Sbjct: 294 IIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIFFAV 353

Query: 371 IGI 373
            G+
Sbjct: 354 WGL 356


>gi|123441584|ref|YP_001005570.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088545|emb|CAL11339.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 381

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W       +   V     ++ Q  S + DL+ +  +DT GA L+   +      
Sbjct: 21  VSIKGDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERIN 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              +      E+  +L+    R              + +     + G+ +     D  S 
Sbjct: 79  HLRELAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSL 138

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA 
Sbjct: 139 LGFVGLTLEALFSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+G
Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L+ V +L+ PR+ AL+ISLP+LT +     I G  +V     DI   +F S   ++  L 
Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQ 316

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+
Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376

Query: 369 FAIG 372
             +G
Sbjct: 377 MEMG 380


>gi|238764189|ref|ZP_04625142.1| ABC transporter, permease protein [Yersinia kristensenii ATCC
           33638]
 gi|238697602|gb|EEP90366.1| ABC transporter, permease protein [Yersinia kristensenii ATCC
           33638]
          Length = 381

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 4/360 (1%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G+W      ++   V     ++    S + DL+ +  +DT GA L+   + +        
Sbjct: 25  GDWVLAHYRDLEPVVAQ--FRTNPPPSVVFDLNQLGALDTAGATLLALLLGESRINNLRD 82

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
                 E+   L+    R                +  L  + G+ +     D  S    +
Sbjct: 83  LAPKLPEERRILLETVSRVLPDLTAASSEKLPPFWLELLANTGRSVDNLWQDIKSLLGFV 142

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           GL +           +++    SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ 
Sbjct: 143 GLTLEALFSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA IF++DL+    LRE  VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V
Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
            +L+ PR+ AL++SLP+LT +     I G  +V     DI   +F S   ++  L +   
Sbjct: 261 ELLVLPRVLALLVSLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLV 320

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ KAP  A  I I+   EGF V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380


>gi|240137395|ref|YP_002961866.1| putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
 gi|240007363|gb|ACS38589.1| Putative ABC transporter, permease [Methylobacterium extorquens
           AM1]
          Length = 382

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 135/373 (36%), Positives = 205/373 (54%), Gaps = 12/373 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G       G W + +     +     I    ++   +VDLS +  +DT+GA ++    
Sbjct: 18  DAGGGRVILHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTR 76

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
              E   G++   G       L   +        +  +P      N         G+++ 
Sbjct: 77  AEIEAAGGRLAYAGARPEHRILLGEMGL------REPEPVPQDTRNPALRFLDTTGQRVA 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +  N+  S    LG V++  G        F+    +L+ Q+  V + GVP+++LISF+ G
Sbjct: 131 RGGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLVG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ E
Sbjct: 189 GIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMRE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +
Sbjct: 249 EVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLA 308

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R  +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI+
Sbjct: 309 RLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIV 368

Query: 360 IDSLFAIFYFAIG 372
           +D LFA+F+ AI 
Sbjct: 369 LDGLFAVFFAAID 381


>gi|198282934|ref|YP_002219255.1| hypothetical protein Lferr_0798 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665617|ref|YP_002425137.1| ABC transporter, permease protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247455|gb|ACH83048.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517830|gb|ACK78416.1| ABC transporter, permease protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 378

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 172/371 (46%), Gaps = 17/371 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G    R +G W    +         A+     S     DLSA+  +D+ GA L+    
Sbjct: 23  DDG--TLRLSGRWTLRRLGGRFAAQEAALRNI--SPEVCWDLSAVEVLDSAGALLLWRAW 78

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
             +     L       +Q  S+ +     +    +P+  +           +G  +++  
Sbjct: 79  GNH-----LPNNIRMADQHHSIFARLADIQPVAARPRHPWH------FLDQLGAFLIETG 127

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D      ++G ++   G        F      +   +   G + +P++ LI F+ G VI
Sbjct: 128 RDLWGLFLLMGALLLEFGRGLRHPRSFP--WREISATIVNTGPNSLPILTLIGFLIGVVI 185

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q A  L+Q+GA I+ I++  +  LRE G L+TA++++GRSGSA  A+IG M + EE+D
Sbjct: 186 SFQSASTLAQYGANIYIINIAGLSILREFGPLITAIILSGRSGSAFTAQIGGMCVTEELD 245

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT G+  +R LI P++  L + +PLL +  +   + GA +V      I    F  +  
Sbjct: 246 ALRTFGIPPIRRLILPKVIGLALVMPLLVLWTDMVGLYGAMLVAKLELGISNRFFIQQMP 305

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 N++ G++K       I  +A   G  V  ++ SL ++ T  VV SI+++I+ID+
Sbjct: 306 VVVPSFNLWLGVVKGALFGILIAWIAGFHGLKVKPNTTSLSRETTNSVVMSITVMILIDA 365

Query: 363 LFAIFYFAIGI 373
           + A+ +   GI
Sbjct: 366 ILALVFANTGI 376


>gi|218528881|ref|YP_002419697.1| hypothetical protein Mchl_0851 [Methylobacterium chloromethanicum
           CM4]
 gi|218521184|gb|ACK81769.1| protein of unknown function DUF140 [Methylobacterium
           chloromethanicum CM4]
          Length = 381

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 134/372 (36%), Positives = 204/372 (54%), Gaps = 12/372 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62
           +        G W + +     +     I    ++   +VDLS +  +DT+GA ++     
Sbjct: 18  DAGGRVILHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRA 76

Query: 63  --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             E   G++   G       L   +        +  +P      N         G+++ +
Sbjct: 77  EIEAAGGRLAYAGARPEHRILLGEMGL------REPEPVPQDTRNPVLRFLDTTGQRVAR 130

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             N+  S    LG V++  G        F+    +L+ Q+  V + GVP+++LISF+ G 
Sbjct: 131 GGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLVGG 188

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ EE
Sbjct: 189 IVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREE 248

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F +R
Sbjct: 249 VDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLAR 308

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI++
Sbjct: 309 LQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVL 368

Query: 361 DSLFAIFYFAIG 372
           D LFA+F+ AI 
Sbjct: 369 DGLFAVFFAAID 380


>gi|254719095|ref|ZP_05180906.1| Sulfate transporter/antisigma-factor [Brucella sp. 83/13]
 gi|265984086|ref|ZP_06096821.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306838379|ref|ZP_07471224.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653]
 gi|264662678|gb|EEZ32939.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306406519|gb|EFM62753.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653]
          Length = 391

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FG EIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGTEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|317182671|dbj|BAJ60455.1| hypothetical protein HPF57_1381 [Helicobacter pylori F57]
          Length = 377

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|16126557|ref|NP_421121.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221235339|ref|YP_002517776.1| ABC transporter permease protein [Caulobacter crescentus NA1000]
 gi|13423841|gb|AAK24289.1| ABC transporter, permease protein, putative [Caulobacter crescentus
           CB15]
 gi|220964512|gb|ACL95868.1| ABC transporter permease protein [Caulobacter crescentus NA1000]
          Length = 371

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 110/371 (29%), Positives = 187/371 (50%), Gaps = 11/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G  V   AG+W +  + +    +  A+           DL+ +   DT GA  I+   
Sbjct: 12  QDGGLVAVLAGDWTARGLFDAGPRLTEALEDR---RDLRFDLTGVNRCDTAGAYAILRAA 68

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                K         + +L  L+    + +     PQR+     F  L   IG+ +    
Sbjct: 69  GD-RLKSDRIIARKQVLRLLELVGAAIKVE-----PQRAARPTGFYALLERIGRGVFGLF 122

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D       LG ++   G    S ++ +     ++      G+  +P++   +F  GAV+
Sbjct: 123 ADGYGTLVFLGHLLVALGRSIVSPHRIR--WAPIVALCERAGLDAMPIIATTTFFIGAVV 180

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L+ FGA++++++L+ I  +RE  +L+TA+++AGRS S+  AEIGSMK+N+EID
Sbjct: 181 ALLGANMLTDFGAQVYAVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEID 240

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MG+D    L+ PR  AL++++PLLT +A  + + G  +V+W   D+    F  R  
Sbjct: 241 AMQVMGVDPYEALVLPRFAALLLTIPLLTFVATIAGLAGGILVVWSVLDLSPTFFLQRIV 300

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 + + GL KAP MA  I  +  ++G  VG    SLG++VT  VV +I  +I+ID+
Sbjct: 301 DYVGATHFWIGLSKAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAIFAIILIDA 360

Query: 363 LFAIFYFAIGI 373
           +FA+ Y  + I
Sbjct: 361 VFALIYMELDI 371


>gi|317014880|gb|ADU82316.1| hypothetical protein HPGAM_07715 [Helicobacter pylori Gambia94/24]
          Length = 377

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGPLKVDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKYEL---MITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|217978940|ref|YP_002363087.1| protein of unknown function DUF140 [Methylocella silvestris BL2]
 gi|217504316|gb|ACK51725.1| protein of unknown function DUF140 [Methylocella silvestris BL2]
          Length = 379

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 6/370 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE G+   + AG+W     ++I +     +     +  AI DL+ +  +DT GA LI   
Sbjct: 14  SEEGVR-LKLAGHWTLDACADIEEGAQALVGAGAGAKHAIFDLAGVQRMDTAGAWLIDGA 72

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++   K      +    ++  L+   H +  +    ++ F+      L   +G+ +V  
Sbjct: 73  RQQLDAKGVSADFAGGRPEIDILLKEAHFRSFEQPPGRKGFY---IVTLLADVGESVVAS 129

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D       LG V+++ G+       F+G   +L+ Q+  + + GVP+++LI+F+ GA+
Sbjct: 130 GRDIYRGVEFLGEVVASIGKSVIQPAHFRG--TALVAQIETIALRGVPIIVLINFLVGAI 187

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +AQQG FQL +FGA I  +DL+ IL LRE+GVLLTA+MI+GRSGSAI AE+GSMK+ EEI
Sbjct: 188 VAQQGIFQLRRFGATILVVDLIGILILRELGVLLTAIMISGRSGSAITAELGSMKMREEI 247

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MGL  + +LI+PRI ALI+SLPLLT LA+ +A+ G  +V W Y  I    F +  
Sbjct: 248 DALVVMGLRPIDVLIAPRILALILSLPLLTFLADMAALAGGILVSWLYGGITPKSFIALL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L    +GLIKAPFM   IG++A  EG AV   + SLG++VT  VV+SI +VI++D
Sbjct: 308 PEAIALRTFLSGLIKAPFMGLIIGLIACMEGLAVAGSAESLGRQVTASVVKSIFMVIVVD 367

Query: 362 SLFAIFYFAI 371
            LFA+F+  I
Sbjct: 368 GLFAVFFATI 377


>gi|315585855|gb|ADU40236.1| ABC superfamily ATP binding cassette transporter permease protein
           [Helicobacter pylori 35A]
          Length = 377

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|308062730|gb|ADO04618.1| putative ABC transport system permease protein [Helicobacter pylori
           Cuz20]
          Length = 377

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 107/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  + S  Y     +   +GK IVK  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKRYEL---MITKLGKSIVKTY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|264676422|ref|YP_003276328.1| inner membrane ABC-transporter component [Comamonas testosteroni
           CNB-2]
 gi|299533747|ref|ZP_07047119.1| putative ABC transporter, permease protein [Comamonas testosteroni
           S44]
 gi|262206934|gb|ACY31032.1| putative inner membrane ABC-transporter component [Comamonas
           testosteroni CNB-2]
 gi|298718296|gb|EFI59281.1| putative ABC transporter, permease protein [Comamonas testosteroni
           S44]
          Length = 375

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 10/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S  G      AG W + E+ +      +A         A  DL  +   D IGA+L+   
Sbjct: 14  SREGQQWAVPAGRWSAAELGDRHIWRRLAPQIRAVPKGAAWDLQQMVWFDHIGAQLLWEQ 73

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             K      L   +          S   R    ++ P+     + +      +G+ ++  
Sbjct: 74  WGKAWPAQLLTTKTQR--------SMLERVARFSEVPESKPEPSGWMCEVNRLGQMVIDA 125

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +   ++G ++ +      +    +G    +   +Y  G + +P+  L+ F+ G V
Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--LRGPWRDISGHLYATGATALPITALVGFLIGVV 183

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   A QL QFGAE F ++++ I  +RE+G LL A+++AGRSGSAI A+IG M++ EE+
Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+     L+ PR  AL +S+PL+ +    +A+ G  +      DI  + F    
Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFVQSL 303

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   + N+   + K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D
Sbjct: 304 PAAVKVGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363

Query: 362 SLFAIFYFAIG 372
           ++FAI +  +G
Sbjct: 364 AIFAILFRNVG 374


>gi|261840140|gb|ACX99905.1| hypothetical protein HPKB_1368 [Helicobacter pylori 52]
          Length = 377

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +P+ IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|34558310|ref|NP_908125.1| toluene ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34484029|emb|CAE11025.1| conserved hypothetical protein-ABC-type toluene export system,
           permease component [Wolinella succinogenes]
          Length = 366

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 182/368 (49%), Gaps = 16/368 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63
                 G W      E+   + +A  +   S    V L  ++ +D   A L++     ++
Sbjct: 10  LRLILRGQWDYELPKELISRLFLACKRD--SVRVSVSLLGVSSLDYSAATLLLELSMAVK 67

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +  G+   +GV   I  +  ++  + R          S            +G+KI + + 
Sbjct: 68  RRGGEWAWEGVPPAIAPILGIVKESKRDLPAPPPSLSS---------LLRLGEKIKESLK 118

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                A  LG  +   G     S   +  L + +  +   G+  VP++ L SF+ G V+A
Sbjct: 119 GLGRFASFLGETLFAMGRSLKESRLIR--LKATLYHIEESGIKAVPIIALTSFLVGIVMA 176

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QGA QL +FGA I  +++  +L LRE+G ++ A+++AGRS S+  A+IG MKI EEIDA
Sbjct: 177 YQGAIQLEKFGASIIVVEMTGMLTLRELGPVIAAIVVAGRSASSYAAQIGVMKITEEIDA 236

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TM  +    L+ PR+ AL++ +PL+  L+N + ++G  ++I  Y  I +  +  RF+ 
Sbjct: 237 MKTMNFNPYAFLVIPRVIALVVVMPLVIFLSNVAGLLGEMLIIKSYLGIGYLQYIERFYE 296

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +++ GLIKAPF    I ++    GF +   + S+G+  T  VV +I  VI ++++
Sbjct: 297 MVEIRHLWVGLIKAPFYGAIIALIGCFRGFQITGSTESVGRYTTISVVNAIFWVIALNAM 356

Query: 364 FAIFYFAI 371
           F+I +   
Sbjct: 357 FSIIFTEY 364


>gi|304391808|ref|ZP_07373750.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
 gi|303296037|gb|EFL90395.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
          Length = 385

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 133/370 (35%), Positives = 211/370 (57%), Gaps = 7/370 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+ V   +G W    I E+ DD+         S   +++ +A T++DT GA LI   
Sbjct: 21  NTDGVLV-TASGPWTIAFIEEVDDDIRA--FSIEGSAKLVLNTTAATQLDTSGAWLIERL 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++               +   L+   HR++    +        S++     +G+  ++F
Sbjct: 78  RQRVEEAGIAFSHEDDEPRRQQLVDVIHRRE--RPETDAPTQTKSWRGPIVRLGEIGIEF 135

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D  +  +ILG  +        S    +    S++ Q+  +G   VPVV ++SF+ GA+
Sbjct: 136 GRDLMTALYILGSSVRGPSSNGGSGRGLRVM--SILNQIDQMGWRAVPVVFVMSFLIGAI 193

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGA+Q+  +G E+ +I L+ IL  RE+GVLLT++M+AGRSGSAI AEIG+MK+ EEI
Sbjct: 194 IAQQGAYQMQAYGEELLAISLVGILHFREVGVLLTSIMVAGRSGSAITAEIGTMKMREEI 253

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL+ V +L+ PR+ A++I LP+LT+L+N + I+GA +V+  Y  I  + F +  
Sbjct: 254 DALQVMGLNPVGVLLFPRLLAIMICLPILTLLSNIAGIMGAMVVMDIYVGITPSQFITTL 313

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  ++  GL KAP MA  IG+VA  EG  VG  S SLG++ T  VV+SI +VI++D
Sbjct: 314 TEDISPRHLAVGLAKAPVMALIIGLVAAVEGLKVGGSSESLGQRTTAAVVKSIFLVIVVD 373

Query: 362 SLFAIFYFAI 371
            LF IF+ A+
Sbjct: 374 GLFTIFFSAM 383


>gi|113866165|ref|YP_724654.1| putative uncharacterized transport protein [Ralstonia eutropha H16]
 gi|113524941|emb|CAJ91286.1| putative uncharacterized transport protein [Ralstonia eutropha H16]
          Length = 378

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 14/373 (3%)

Query: 4   NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60
           +G       G+W +  ++    A  +   +++  Q+ DSA   L+ +  +D IG +L+  
Sbjct: 17  DGTVSVALRGDWTALALAGCHQARQLRAQLHELAQAPDSAQWSLAGVERLDHIGGQLLWQ 76

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                       G                 +    Q            N     G  ++ 
Sbjct: 77  AWN---------GALPQRLDASEGQRRVFERIAAVQNEGWKKHMVDRFNPITLFGANVLS 127

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F     S   +LG +  +   F       +G    +   +Y VG   + +  L+ F+ G 
Sbjct: 128 FGAQLRSGITMLGQLAFDLLRFAGVPQ--RGPWREISANIYNVGYKALGITALVGFLIGI 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++   A QL  FGA  F ++++ +  +RE+G +L A++IAGRSGSAI A+IG M++ EE
Sbjct: 186 VLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     LI PR+ AL I++PLL    +  A+ G  +       I    F   
Sbjct: 246 LDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLRE 305

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +AN++ GL K       I + A   G  +  ++ SLG+  T  VV +I+IVI+ 
Sbjct: 306 LPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVILA 365

Query: 361 DSLFAIFYFAIGI 373
           D++FA+ +  +G+
Sbjct: 366 DAVFAVLFKDVGL 378


>gi|115353001|ref|YP_774840.1| hypothetical protein Bamb_2950 [Burkholderia ambifaria AMMD]
 gi|115282989|gb|ABI88506.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD]
          Length = 374

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +   
Sbjct: 19  TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALWRVWGR--- 75

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             KL           ++     R   + + P+R   +     L    G  +  F      
Sbjct: 76  --KLPDGVALSPTQRTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|261838741|gb|ACX98507.1| ABC transport system permease [Helicobacter pylori 51]
          Length = 377

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGADSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|188590871|ref|YP_001795471.1| hypothetical protein RALTA_A0076 [Cupriavidus taiwanensis LMG
           19424]
 gi|170937765|emb|CAP62749.1| conserved hypothetical protein, DUF140; putative TRANSMEMBRANE
           PROTEIN [Cupriavidus taiwanensis LMG 19424]
          Length = 376

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 96/373 (25%), Positives = 168/373 (45%), Gaps = 14/373 (3%)

Query: 4   NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMY 60
           +G    +  G+W +  ++    A  +   +++  Q+   A   L+ +  +D IG +L+  
Sbjct: 15  DGTVSVQLRGDWTALALAGCHQARQLRAQLHELAQAPDHAQWSLAGVERLDHIGGQLLWQ 74

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                       G      +          +    Q            N    +G  ++ 
Sbjct: 75  AWN---------GALPQRLEASEGQRRVFARIAAVQDEGWKKHMVDRFNPVTLLGANVMS 125

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F     +   +LG +  +   F       +G    +   +Y VG   + +  L+ F+ G 
Sbjct: 126 FGVQLGNGITMLGQLAFDLLRFARMPQ--RGPWREISANIYNVGYKALGITALVGFLIGI 183

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++   A QL  FGA  F ++++ +  +RE+G +L A++IAGRSGSAI A+IG M++ EE
Sbjct: 184 VLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEE 243

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     LI PR+ AL I++PLL    +  A+ G  +       I    F   
Sbjct: 244 LDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLRE 303

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +AN++ GL K       I + A   G  +  ++ SLG+  T  VV +I+IVI+ 
Sbjct: 304 LPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVILA 363

Query: 361 DSLFAIFYFAIGI 373
           D++FAI +  +G+
Sbjct: 364 DAVFAILFKDVGL 376


>gi|308185234|ref|YP_003929367.1| putative ABC transport system permease protein [Helicobacter pylori
           SJM180]
 gi|308061154|gb|ADO03050.1| putative ABC transport system permease protein [Helicobacter pylori
           SJM180]
          Length = 377

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  + S  Y     L   +GK +V+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKQYEL---LITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|188528238|ref|YP_001910925.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470]
 gi|188144478|gb|ACD48895.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470]
 gi|308064225|gb|ADO06112.1| putative ABC transport system permease protein [Helicobacter pylori
           Sat464]
          Length = 377

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKRYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|311694463|gb|ADP97336.1| ABC transporter, permease protein [marine bacterium HP15]
          Length = 388

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 186/365 (50%), Gaps = 5/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G+W       ++       ++ +      ++LS +T IDT GA  +   +     
Sbjct: 28  TLSVNGDWLLSHYRSLSSLASSMSSRDLI--KLSINLSGLTRIDTAGASQLASLIGPERL 85

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  S    +  +LI+      +KNQ        +   +     G+K+         
Sbjct: 86  LEAASADSELPRETSALIAAVCEA-MKNQPEADRRSPSLVWSFVTGTGQKVESIFRLLWI 144

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G  +          ++++      +  ++  G++ +P+V L++F+ GAV+A  GA
Sbjct: 145 LVGFIGQTLGTLAWNLPRPWRWRM--TPFVAAVHDTGLNALPIVALLTFLVGAVVAFLGA 202

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGA I++++L++   LRE GVLL A+++AGR+ SA  A IG+MK+NEE+DAIRT+
Sbjct: 203 TVLDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAHIGAMKVNEELDAIRTL 262

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ + +L+ PR+ A+++SLP+LT +   S ++G ++V     DI    F +       L
Sbjct: 263 GLNPIELLVLPRVMAMMVSLPILTFVGMISGMVGGAMVCALVLDITPTQFMAIVERDIAL 322

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   G++KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI++DS+ A+F
Sbjct: 323 QHFVVGIVKAPIFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVILLDSIAALF 382

Query: 368 YFAIG 372
           +  +G
Sbjct: 383 FMEMG 387


>gi|317179642|dbj|BAJ57430.1| hypothetical protein HPF30_1333 [Helicobacter pylori F30]
          Length = 377

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  KERSLDIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|119897565|ref|YP_932778.1| putative ABC transporter permease [Azoarcus sp. BH72]
 gi|119669978|emb|CAL93891.1| putative ABC transporter permease protein [Azoarcus sp. BH72]
          Length = 380

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 124/372 (33%), Positives = 199/372 (53%), Gaps = 5/372 (1%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++  G  V R +G+W       IAD V              VD S +  +DT GA L++ 
Sbjct: 13  LAAAGGGVLRLSGDWTLAHYRSIADTVSALRANVQHG--TAVDASGLGALDTAGASLLVQ 70

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
            +  + G   L        +  +L+           +P+ +   ++  ++  HIG  +  
Sbjct: 71  LLG-HDGLQALSTDPALAPERRALLRAVADALATPPEPEPADTGSALGDVLEHIGIAMGV 129

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F   +      +GL + +     A   +++  L +L   +    +  VP+V L++F+ GA
Sbjct: 130 FWRHAVGLLGFIGLTLESAFRIIAQPARWR--LTALAANLEKTALDAVPIVALLTFLVGA 187

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A  GA  L+ FGA IF++DL++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEE
Sbjct: 188 VVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILVAGRTASAFTAQIGSMKANEE 247

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIR +GLD V +L+ PR++AL+++LP+LT +A  S I+G  +V     DI   +F S 
Sbjct: 248 IDAIRVLGLDPVELLVLPRVYALLLALPMLTFVAMLSGIVGGMLVCALTLDISPVMFLSI 307

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F +   L +   G+ KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI++
Sbjct: 308 FENDVGLRHFIVGIAKAPIFAFLIAVIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIVV 367

Query: 361 DSLFAIFYFAIG 372
           D++ A+    +G
Sbjct: 368 DAVAALLCMELG 379


>gi|163850324|ref|YP_001638367.1| hypothetical protein Mext_0891 [Methylobacterium extorquens PA1]
 gi|254559575|ref|YP_003066670.1| ABC transporter permease [Methylobacterium extorquens DM4]
 gi|163661929|gb|ABY29296.1| protein of unknown function DUF140 [Methylobacterium extorquens
           PA1]
 gi|254266853|emb|CAX22652.1| Putative ABC transporter, permease [Methylobacterium extorquens
           DM4]
          Length = 382

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 135/374 (36%), Positives = 206/374 (55%), Gaps = 14/374 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G  +    G W + +     +     I    ++   +VDLS +  +DT+GA ++   
Sbjct: 19  AAGGRVILH--GRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERT 75

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               E   G++   G       L   +        +  +P      N         G+++
Sbjct: 76  RAEIEAAGGRLAYAGARPEHRILLGEMGL------REPEPVPQDTRNPALRFLDTTGQRV 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
            +  N+  S    LG V++  G        F+    +L+ Q+  V + GVP+++LISF+ 
Sbjct: 130 ARGGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLV 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA  AEIGSM++ 
Sbjct: 188 GGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMR 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+R MGLD + ILI PRI AL+I LP+L  L + +A+ G  +    Y  +    F 
Sbjct: 248 EEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFL 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +R  +  +  +   GLIKAPFMA  IGI+A  EGFAV   + SLG+ VT  VV+SI +VI
Sbjct: 308 ARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVI 367

Query: 359 IIDSLFAIFYFAIG 372
           ++D LFA+F+ AI 
Sbjct: 368 VLDGLFAVFFAAID 381


>gi|283957032|ref|ZP_06374504.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283791533|gb|EFC30330.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 369

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 113/369 (30%), Positives = 186/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL+KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSAGI 369


>gi|285019443|ref|YP_003377154.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283474661|emb|CBA17160.1| probable abc transporter permease protein [Xanthomonas albilineans]
          Length = 405

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 117/366 (31%), Positives = 193/366 (52%), Gaps = 13/366 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +  R  G+W           V   + +S+ + +  +D S I ++D+ G   ++ +  +  
Sbjct: 52  SRVRLTGSWTLSTAL-----VASEVLRSMPAGTTGIDASGIAQLDSAGVLQLIRYATRNG 106

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +          L S I      + K +          F      +G  + +   +  
Sbjct: 107 IAQESLDFRQDHRALVSTIEDVADDRPKRK------RDYGFAAALERLGYTVHRNGKEIV 160

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    LG  +        +  +F+  L S +  M  VG+  VP+V L+S++ GAVIA  G
Sbjct: 161 ALVGFLGETLVKLMRLMHAPRRFR--LTSTVHHMEQVGLDAVPLVALLSYLVGAVIAFLG 218

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           +  L  FGAEI+ ++L+SI  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDAI+T
Sbjct: 219 STVLRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAIQT 278

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL++ LPLLT +A  + + G   V      IP  ++ +R H T  
Sbjct: 279 LGLDPMDLLVIPRLLALLLMLPLLTFVAMIAGLAGGVTVGAFDLGIPPQMYLARMHDTIQ 338

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + ++  GL KAP  A AIG++   EG  V   + S+G++ T+ VVQ+IS+VIIID++ A+
Sbjct: 339 IRHMLVGLAKAPIFAIAIGLIGCLEGLRVEGTAQSVGERTTSSVVQTISLVIIIDAIAAL 398

Query: 367 FYFAIG 372
           ++  +G
Sbjct: 399 WFMKMG 404


>gi|182680400|ref|YP_001834546.1| hypothetical protein Bind_3500 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636283|gb|ACB97057.1| protein of unknown function DUF140 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 376

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 122/371 (32%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                     G+W     + + + ++  + +  +  +  VD+  + EIDT GA L+   +
Sbjct: 12  RGETLNVIATGSWIGAHAAAL-EPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLI 70

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           + +  + K   ++   ++   L++          +           +     G+  +   
Sbjct: 71  QSWKAEGKETTITGLSDRFGDLVAEVDHVSRSMSQAAAKRTS---LDSLRAFGRAAMDLW 127

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D+ +   +LG +++          K +    SL+ Q+  VG+  VP+++LI+F+ G +I
Sbjct: 128 LDTRNFLVVLGRLVAVFLVVLRHPKKMR--FTSLVAQLDRVGLQAVPIILLITFLIGGII 185

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQG F   +FGA+ + +DL++ L LRE+GVL+ A+M+AGRSGS+  AEIGSMK+ EEID
Sbjct: 186 AQQGLFNFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKMREEID 245

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RTMGLD V +L+ PR+ AL+++LP+LT L   +A+ G  +V W Y  +   +F  R  
Sbjct: 246 ALRTMGLDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIR 305

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
             A+L     GLIKAPFMA  IG++A  EG AV   + SLG + T+ VV+SI ++I++D 
Sbjct: 306 DAASLTQFEVGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDG 365

Query: 363 LFAIFYFAIGI 373
           +  +F+ A G+
Sbjct: 366 ILDLFFAATGM 376


>gi|114707109|ref|ZP_01440007.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506]
 gi|114537305|gb|EAU40431.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506]
          Length = 394

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 139/371 (37%), Positives = 220/371 (59%), Gaps = 3/371 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G  V   AG+W +  I  I  D+       + +D   +DLS + +IDT GA ++    
Sbjct: 27  RGGTLVLEAAGDWLARTIGSIESDLERTARADLGAD-VAMDLSRVGQIDTAGAFVLERLK 85

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                K +   V    E+  +L +       + +  ++        N    +G  ++   
Sbjct: 86  RDLRAKREHVEVEGLAERNTALFAAVGSAMDRERPVRQRERSKILTNAVIAVGSFVIGIK 145

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ++  +  +++G  +   G   +   + +    ++  Q+  +GV  +P+++LI+F+ G +I
Sbjct: 146 DELVNGLNLIGGAMYGAGSRISGRTQSRP--AAIFNQIDQMGVKAIPIIVLITFLVGGII 203

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL ++G E+++++L+SIL LREIGVLL A+MIAGRSGSAI AEIGSMK+ EE+D
Sbjct: 204 AQQGAFQLRRYGGEVYAVNLISILVLREIGVLLAAIMIAGRSGSAICAEIGSMKMREEVD 263

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ + +L+ PR+ AL I+LPLLT++AN +A++G +I +  Y DI F  F     
Sbjct: 264 ALHVIGLNPIGVLVFPRLVALSIALPLLTVIANLAALVGGAITLRIYSDISFLNFLQGLQ 323

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            +  L  +F+GL+KAPFMA  IG+VA  EG  VG  + SLG +VT  VV+SI +VI++D 
Sbjct: 324 QSIDLFTVFSGLLKAPFMAILIGLVAANEGMKVGGSAESLGLRVTAAVVKSIFLVIVMDG 383

Query: 363 LFAIFYFAIGI 373
           LFAIFY +IG+
Sbjct: 384 LFAIFYASIGL 394


>gi|307638119|gb|ADN80569.1| organic solvent resistant ABC transporter [Helicobacter pylori 908]
 gi|325996719|gb|ADZ52124.1| putative ABC transport system, permease protein [Helicobacter
           pylori 2018]
          Length = 377

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKYEL---MITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|172061853|ref|YP_001809505.1| hypothetical protein BamMC406_2812 [Burkholderia ambifaria MC40-6]
 gi|171994370|gb|ACB65289.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6]
          Length = 374

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   +        +  DLS I  +D +G + +     +   
Sbjct: 19  TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R   +     L    G  +  F      
Sbjct: 79  DGVALSTTQ-----RTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + GLVI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|160872209|ref|ZP_02062341.1| ABC transporter, permease [Rickettsiella grylli]
 gi|159121008|gb|EDP46346.1| ABC transporter, permease [Rickettsiella grylli]
          Length = 375

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 112/376 (29%), Positives = 194/376 (51%), Gaps = 13/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +S+ G       G W    I +   D     +N+ I+S   I++ + IT++D+ GA  + 
Sbjct: 10  LSKQGNHQIDCQGAWTLSGIRKKNLDQSFQKLNRHIESP-LILNAAFITQMDSSGAWQLY 68

Query: 60  YFMEKY--HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
            + ++     K+ L G+++  + LF +I     +     + +              +GKK
Sbjct: 69  QWKKQLAKKRKVHLIGLNSKHQALFGMIETAAEQIKPLPREKT-------FRGLGLLGKK 121

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++  N+  S    +G    +         + +    +++  +   G+  + ++ L+SF+
Sbjct: 122 SIEQWNELKSYLAFIGKNFISACHAFLHPRQLRV--RAILGIIENTGLDALGIIALLSFM 179

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  Q  FQL  FGA  F IDL+ +  LRE   LLTA+M+AGRSGSA  A++G MKI
Sbjct: 180 IGIVLTYQMGFQLKNFGATRFIIDLLGLAILREFSPLLTAIMVAGRSGSAFTAQLGMMKI 239

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+ TMG+   ++LI PR+W L+++LPLLT+ A+   ++G   +     +I +  F
Sbjct: 240 KEEIDALNTMGVLPRQLLILPRLWGLLLALPLLTVWADIFGLLGGMAMTHNMMNISYLDF 299

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             RF    +L+++  G+ KAP  A  I   A  +G  V   ++S+G++ T  VVQ I  +
Sbjct: 300 LHRFPKVVSLSSLIIGVGKAPVFALIIASTACFQGLRVSGSADSVGRQTTRSVVQGIFFI 359

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D+LF+I +  + I
Sbjct: 360 IVADALFSILFSTLNI 375


>gi|86149247|ref|ZP_01067478.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88596442|ref|ZP_01099679.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|218563235|ref|YP_002345015.1| putative ABC transporter permease [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840029|gb|EAQ57287.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88191283|gb|EAQ95255.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112360942|emb|CAL35743.1| putative ABC transport system permease [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284926840|gb|ADC29192.1| putative ABC transport system permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315929480|gb|EFV08676.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 369

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 112/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSHQN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      ++ PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSTGI 369


>gi|15598407|ref|NP_251901.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9949331|gb|AAG06599.1|AE004744_14 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 381

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 112/366 (30%), Positives = 183/366 (50%), Gaps = 4/366 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G+W     + +  +V     +S  + +   DLS +  +DT GA L+   +    
Sbjct: 19  ARVRAIGDWTLAHYTALEREVTRL--RSEVAANVSFDLSQLGALDTAGAALLAELLGAER 76

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
                +       +  +L+           +P++     +   L   IG  +  F     
Sbjct: 77  LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 136

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +GL +            ++     L+  +   G+  VP++ L++F+ GAVIA  G
Sbjct: 137 ALLGFIGLTLETLFRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 194

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA I++++L+    LRE  VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR 
Sbjct: 195 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 254

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ + +L+ PR+ AL++SLP+LT +     I+G   V     DIP A+F S       
Sbjct: 255 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIG 314

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +   G+ KAP  A  I ++   EGF V   + S+G+  TT VV SI +VI++D+L A+
Sbjct: 315 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 374

Query: 367 FYFAIG 372
            +  +G
Sbjct: 375 LFMEMG 380


>gi|254458263|ref|ZP_05071689.1| stas domain protein [Campylobacterales bacterium GD 1]
 gi|207085099|gb|EDZ62385.1| stas domain protein [Campylobacterales bacterium GD 1]
          Length = 357

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 174/365 (47%), Gaps = 8/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            +F+G +    ++   + +       +       DL  +   DT  +  I   + K   K
Sbjct: 1   MKFSGEFTLYTVTSYQNKIDEIDFSQV--RKVDFDLEDVVYFDTAASIFINSLIHKLTQK 58

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                + T  + +   +    + K  +Q            N    IG+    + +   + 
Sbjct: 59  NITSNIITTNKDILDTLELVLKSKKTSQAIPEETRP----NFLNIIGENTYLYYSGFVAF 114

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + +       +    +     +  ++    +  + ++ L SF+ G V+A Q A+
Sbjct: 115 MAFIGQLFATKINTLKTIKNIR--FKEIAFEINESAIKALGIISLTSFLIGLVVAYQSAY 172

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  +GA IF +D++ I  LRE+  L+TA++IAGRSGSA  A+IG+MKI EE+DA+RTMG
Sbjct: 173 QLKIYGANIFIVDMLGISMLRELAPLMTAIVIAGRSGSAFTAQIGAMKITEELDAMRTMG 232

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D    L+ PRI AL+I++P+L  +A+  ++ G  +V     DI   +F  RF+      
Sbjct: 233 FDPYIFLVLPRIIALMIAMPILIFVADIMSVFGGLLVAVIDLDISPQLFIDRFNDVVAAK 292

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           + F G+ K PF A  I  + +  G  V   + S+G   T  VV+SI  VII D++F+I +
Sbjct: 293 HFFIGIGKGPFFAFIIASIGVYRGLEVKDDTQSIGFNTTKSVVESIFAVIICDAIFSILF 352

Query: 369 FAIGI 373
             +GI
Sbjct: 353 TNLGI 357


>gi|159184854|ref|NP_354638.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140135|gb|AAK87423.2| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 386

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 157/370 (42%), Positives = 223/370 (60%), Gaps = 6/370 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G + +  +G+W++  +S I + +   I KS  +    +DLSA+  IDT GA +I    
Sbjct: 22  SGGGSRYVLSGSWRNSNLSGIFESLDR-IEKSKPASPVDIDLSAVEAIDTTGAWIIQRLR 80

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           +          ++ +      +     + ++  +           + +   IG+ +V+  
Sbjct: 81  KDLEASGATVTLTGNDRIEDVIGQLPDKAEMDVEPVA---REGLVERIFAPIGQAVVQNG 137

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D  +  +ILG  +                  +++ Q+ ++GV  VP+++L+SF+ GA+I
Sbjct: 138 ADFLAGMYILGSAVRGAQMKLGRGRGVSP--AAIVNQIDHMGVRAVPIIMLMSFLIGAII 195

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID
Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 255

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV   Y  I F VF SR H
Sbjct: 256 ALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVFLSRLH 315

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                + I  G+IKAPFMA  IGIVA  EG  VG  + SLGK VT+ VV+SI +VI++D 
Sbjct: 316 GAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDG 375

Query: 363 LFAIFYFAIG 372
           LFAIFY AI 
Sbjct: 376 LFAIFYAAID 385


>gi|254487283|ref|ZP_05100488.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101]
 gi|214044152|gb|EEB84790.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101]
          Length = 369

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 129/369 (34%), Positives = 205/369 (55%), Gaps = 8/369 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
             T    +G+ +   +    D +  +      +   ++D+S +T IDT GA L++Y  ++
Sbjct: 9   DGTRLVVSGDLRIAAV----DALDRSALLKKAAGVTVIDISGLTRIDTAGAWLLVYAQDR 64

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                K   ++   +    LI             +      +  +    +G+ +      
Sbjct: 65  LAAPGKRVEITGTSDAQAQLIDVVRASMPPADIAE--PKPKTLADQVETLGRMVTSGARK 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      LG V++          +F+  L SL+     VG++ VP+V L+SF+ G V+A 
Sbjct: 123 TVELTSFLGQVVATMAGTLIHPRRFR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVLAF 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QGA QL QFGAE+F +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EEIDA+
Sbjct: 181 QGAVQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+GLD V IL+ PR+ AL++ LP L +LA+ S ++G +++ W    +  AVF SR    
Sbjct: 241 RTIGLDPVTILVVPRVLALMLMLPALGLLADISGLVGGAVMSWIELGVSPAVFQSRLVGN 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +   G+IKAPF A  IGI+   EG  VG  + SLG+  +T VV SI +VI++D++F
Sbjct: 301 TDVWHFGVGMIKAPFFALIIGIIGCYEGMKVGGDAESLGRLTSTSVVLSIFMVIVMDAMF 360

Query: 365 AIFYFAIGI 373
           +IF+  +G+
Sbjct: 361 SIFFAIVGV 369


>gi|308183565|ref|YP_003927692.1| putative ABC transport system permease protein [Helicobacter pylori
           PeCan4]
 gi|308065750|gb|ADO07642.1| putative ABC transport system permease protein [Helicobacter pylori
           PeCan4]
          Length = 377

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|297380678|gb|ADI35565.1| conserved hypothetical protein [Helicobacter pylori v225d]
          Length = 377

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  VD S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKRYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|254710104|ref|ZP_05171915.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis B2/94]
 gi|261317653|ref|ZP_05956850.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261296876|gb|EEY00373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
          Length = 391

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G+ V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    
Sbjct: 24  QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++   K     +    E    L+        +     R+     F      +G  ++   
Sbjct: 83  QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           ND     HILG  I                  +++ QM  +GV  +P+V+L+S + GA+I
Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D
Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H
Sbjct: 261 ALTVIGLNAVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L   F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D 
Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380

Query: 363 LFAIFYFAI 371
           LFA+FY AI
Sbjct: 381 LFAMFYAAI 389


>gi|163793381|ref|ZP_02187356.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           BAL199]
 gi|159181183|gb|EDP65698.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           BAL199]
          Length = 391

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 211/375 (56%), Gaps = 12/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G  V R  G W       +   +    +++  + S  VD ++++ +D+ GA +I   
Sbjct: 26  TRDGTLVVRLRGPWTLQTALSVDAAIRALADRA--AASVTVDATSLSRLDSAGAWVIQRT 83

Query: 62  ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
               ++    +++ G+   ++ +    +   +       P      +S  N    +G++ 
Sbjct: 84  VAQFDRRGVPVEIVGLDEGLQAILDKAAEHDQSADIAPAPT-----SSLLNFLERLGRRS 138

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V+ ++   +   +LG+V+  +G         +G   +++ Q+   GV+ +P+V L+ F+ 
Sbjct: 139 VEGLHTGRNLLGLLGVVVVASGRIVVRPMTLRG--TAVVAQIEATGVTALPIVGLLCFLV 196

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+A  GA QL++FGA   +++L+ I  LREIG+LLTA+++AGRSGSA  A+IG+MK+N
Sbjct: 197 GVVLAYMGALQLTRFGAANLTVNLVGISVLREIGILLTAIIVAGRSGSAFAAQIGTMKVN 256

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA+ TMGL  + +L+ PR+ ALII LP LT+ A+ + ++G ++V     D+    F 
Sbjct: 257 QEIDALETMGLSVIDVLVLPRVIALIIVLPALTVFADVAGLVGGAMVCMFQLDMTIGQFL 316

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +  T+ +  TGLIKAP  A AI +V    G  V   + S+G++ T  VV+SI +VI
Sbjct: 317 TQLSAGVTVWSFATGLIKAPVFALAIALVGCHSGLGVSGSAESVGRQTTRAVVESIFLVI 376

Query: 359 IIDSLFAIFYFAIGI 373
           I++++FAI +  IGI
Sbjct: 377 ILNAIFAIAFAKIGI 391


>gi|317010161|gb|ADU80741.1| putative ABC transport system permease protein [Helicobacter pylori
           India7]
          Length = 377

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESEKAGKKYEL---MITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL + GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQEMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAINYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|86152328|ref|ZP_01070539.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|121613751|ref|YP_001001289.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|167006183|ref|ZP_02271941.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315125046|ref|YP_004067050.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|85840817|gb|EAQ58068.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|87249848|gb|EAQ72807.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315018768|gb|ADT66861.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 369

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSSFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSAGI 369


>gi|319788025|ref|YP_004147500.1| hypothetical protein Psesu_2437 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466537|gb|ADV28269.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 371

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 119/364 (32%), Positives = 184/364 (50%), Gaps = 13/364 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W      E+A  +     + I  D A VD S +  ID+ G   +  F  +    
Sbjct: 20  VRLQGDWILDHALEMAARL-----REIPGDVASVDASGVGRIDSAGMMQLARFARRRELA 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                 S     L  LI      + + +          F      +G+       +    
Sbjct: 75  DDALHFSESHLPLVQLIEDVPDDRPRRK------RDYGFAAALERLGRATHTVGRNIVEL 128

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +           +    L + +  M  VG+  +P+V L+S++ GAVIA  G+ 
Sbjct: 129 LGFTGENLVKLLRLLRQPRR--FRLTATVSHMEQVGLDALPLVALLSYLVGAVIAFLGST 186

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGAEIF ++L+SI  LRE  VLLTA+++AGR+ SA  A+IGSMK  EEIDAIRT+G
Sbjct: 187 ILADFGAEIFVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGSMKAREEIDAIRTLG 246

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD + +L+ PR+ AL++ LPLLT +A  + + G   V     +IP  ++ +R   T  + 
Sbjct: 247 LDPIELLVIPRLVALLVMLPLLTFVAMMAGLAGGVTVGAFDLEIPPQMYLARMEETMQVR 306

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+L A+++
Sbjct: 307 HFLVGMSKAPVFAMVIGLIGCLEGMRVQGSAQSVGERTTSSVVQTISLVIIIDALAALWF 366

Query: 369 FAIG 372
             +G
Sbjct: 367 MNMG 370


>gi|88810292|ref|ZP_01125549.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231]
 gi|88791922|gb|EAR23032.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231]
          Length = 364

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 181/366 (49%), Gaps = 12/366 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G+W    ++ +   +    N  + S    ++L  I+ +DT GA ++     +    
Sbjct: 10  VICSGDWSVERLAAVERQIRR--NAPMTSGEWRINLGEISTLDTAGAVMVQRLCRRLRTA 67

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +     +  +++     +     +   S       N    +G+++          
Sbjct: 68  GASVQLEDVSAERHAVLKLVASEMEVTPRRPYS-------NPLERLGRRVTDGCFGITEY 120

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + +++       ++ +     +  ++   GV  +P++ L++F+ G V+A Q   
Sbjct: 121 LAFIGRLTADSLPRMLRPHRLR--WHEIAVELERAGVMAIPIIGLLAFLIGIVMAYQSGD 178

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  +GA IF +DL+ ++ LRE+G L+TAV++AGR+G++  A+IG+M + EE+DA+RTMG
Sbjct: 179 ILQTYGANIFLVDLLGVIILREMGPLMTAVIVAGRTGASYTAQIGTMHLTEEVDALRTMG 238

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +    +L+ P+  AL+I+LPLLT+ A+   ++G  +V    Y + F VF  R  +     
Sbjct: 239 VTPFEMLVLPKFLALLIALPLLTVWADAIGLLGGMLVSSLLYGVDFDVFLRRLPTAVPPN 298

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI-F 367
             + G+ KAP  A  I  +   +GF +   ++ +G+  T  VVQ I  VI+ D++F+I  
Sbjct: 299 MFWVGIAKAPVFAALIASIGCYQGFRIRYSADEVGRYTTISVVQGIFWVIVADAVFSIVL 358

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 359 FSWLGL 364


>gi|57238657|ref|YP_179788.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           RM1221]
 gi|57167461|gb|AAW36240.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           RM1221]
 gi|315059096|gb|ADT73425.1| Putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 369

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ ALI+++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVVLTSAGI 369


>gi|27381005|ref|NP_772534.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354171|dbj|BAC51159.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 367

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 127/370 (34%), Positives = 191/370 (51%), Gaps = 5/370 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
                    G W +     +   V  A   +    S  +D+S + ++DT GA LI     
Sbjct: 3   GNALALCATGTWTASFAPVLERMVADAEKLAGSPQSIFIDVSEVAKLDTFGAWLIERLRR 62

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                     ++       SL+    R +     P       +   +   IG+ +     
Sbjct: 63  SLTQGTVEAQIAGLSANYSSLVDEVRRVRAT---PVVDAGTITITGMLDQIGRAVAGVAG 119

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V++  G        F+  L S +  M  V    VP+++LI+F+ G +IA
Sbjct: 120 TVAGLIDMLGAVLAAGGRVLIHPRSFR--LTSTVHHMEQVCWRAVPIIVLITFLIGCIIA 177

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           QQG F   +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA  AE+GSMK+ EEIDA
Sbjct: 178 QQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDA 237

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RTMG D + +L+ PR+ AL+++LP+L  L   +A+ G  +V W Y  +    F  R   
Sbjct: 238 LRTMGFDPIEVLVLPRMLALVLALPILAFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRD 297

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             ++ +   G++KAP MA  IGIVA  EG AV   + SLG+  T  VV+ I  VI++D +
Sbjct: 298 AISIDHFIVGIVKAPVMAAVIGIVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGV 357

Query: 364 FAIFYFAIGI 373
           FAIF+ +IG+
Sbjct: 358 FAIFFASIGM 367


>gi|109948194|ref|YP_665422.1| putative ABC transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
 gi|109715415|emb|CAK00423.1| putative ABC transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
          Length = 377

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W       + D++   ++         +D S   ++D +    +   +
Sbjct: 14  DGSGSVLILGGDWDFRTSVFLLDELKKTLSNH--QGRLKMDFSRCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS        ++     K    +  +    Y         +GK IV+  
Sbjct: 72  KERSLNIELCNVSESNACALKVVRDWLEKDGNIESQKTIKKYELV---VTKMGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F      L+  +   G   +PV IL  F+ G  I
Sbjct: 129 NTFLNALNFCGMILFYFIKGVFNPKRF--CFTPLVYHINESGFKVLPVSILTVFIVGFAI 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             QGA QL   G  + ++++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 TLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ ALII LPL+  +A+  AI+G+   +    D+ F+ +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSSYVDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ST T  + + G+IKAPF   AI +V    GF V   + S+G+  T  VV ++  +I +++
Sbjct: 307 STVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFWIIFLNA 366

Query: 363 LFAIFYFAIGI 373
            F+I +  +GI
Sbjct: 367 TFSIVFSRLGI 377


>gi|238754554|ref|ZP_04615908.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473]
 gi|238707185|gb|EEP99548.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473]
          Length = 343

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 113/336 (33%), Positives = 174/336 (51%), Gaps = 2/336 (0%)

Query: 37  SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
             S   DLS +  +DT GA L+   +         +      ++   L+    +      
Sbjct: 9   PASITFDLSQLGRLDTAGATLLATLLGGERISHLRELAPLLPDERRILLETVSQVLPNLA 68

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
                     +  L   IG+ +     D  S     GL +           +++    SL
Sbjct: 69  SQPTVKPPPFWIGLLVPIGQSVDNLWQDFKSLLGFTGLTLEALFGTVFRPSRWRM--TSL 126

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           I  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  VLLT
Sbjct: 127 IANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLT 186

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT +   
Sbjct: 187 AILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIGMV 246

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             I G  +V     +I   +F S   ++  L +   G+ KAP  A  I I+   EGF V 
Sbjct: 247 CGIFGGMVVCALALNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFKVS 306

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 307 GSAESVGIHTTTSVVHSIFVVILLDAVAALFFMEMG 342


>gi|15646075|ref|NP_208257.1| hypothetical protein HP1466 [Helicobacter pylori 26695]
 gi|2314643|gb|AAD08507.1| conserved hypothetical integral membrane protein [Helicobacter
           pylori 26695]
          Length = 377

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSIIFSKLNI 377


>gi|304319773|ref|YP_003853416.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis
           HTCC2503]
 gi|303298676|gb|ADM08275.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis
           HTCC2503]
          Length = 380

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 129/362 (35%), Positives = 195/362 (53%), Gaps = 3/362 (0%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G W         D  + A+N   + D A +DLS I  +DT GA ++     +  G+ + Q
Sbjct: 21  GEWTLRGGLTKIDSKIRALNFGPREDLAEIDLSQIEALDTAGALMLQRLRHRCMGEGRPQ 80

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQK-PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131
            ++T             R                SF  L   +G+  +   N+  +    
Sbjct: 81  AIATLTGMTDPQHELMERMAAHIADCEGDPPRRKSFILLLNRVGQGTIAVGNEGLAILSF 140

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G V++       S  +F+  L + +  M   G++   +V L+SF+ GAV+A  GA  LS
Sbjct: 141 VGSVVARLAGTIMSPARFR--LTATVAHMEEAGLNSTLIVGLMSFLIGAVVAFMGARVLS 198

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGAE+FS++L+ I  LRE GVLLTA++IAGRSGSA  A IGSMK+ EEIDA+R +G+  
Sbjct: 199 EFGAEVFSVELVGISVLREFGVLLTAILIAGRSGSAFTASIGSMKLREEIDAMRALGISP 258

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  LI PR  AL+++LP+L  LA F  ++G  +V W   DIP  +F  R     T+ N+F
Sbjct: 259 LDALILPRTIALVLTLPVLAFLAGFLGLLGGGVVGWLALDIPPQLFIGRLQEIVTVENLF 318

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            GL+KAPF A  I +V    G +V   +  LG++ T  VVQS+ +VI++D+LFA+ +  +
Sbjct: 319 VGLVKAPFFAFVIAVVGCYHGMSVENSAEELGRRTTMAVVQSLFLVILLDALFAMLFLEL 378

Query: 372 GI 373
            I
Sbjct: 379 DI 380


>gi|325998313|gb|ADZ50521.1| hypothetical protein hp2017_1400 [Helicobacter pylori 2017]
          Length = 377

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     KK   +  +    Y     +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLVKKNDLESKKAGKKYEL---MITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|108563874|ref|YP_628190.1| hypothetical protein HPAG1_1449 [Helicobacter pylori HPAG1]
 gi|107837647|gb|ABF85516.1| ABC transport system permease [Helicobacter pylori HPAG1]
          Length = 377

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLETKKAGKHYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|15612424|ref|NP_224077.1| hypothetical protein jhp1359 [Helicobacter pylori J99]
 gi|4155971|gb|AAD06935.1| putative [Helicobacter pylori J99]
          Length = 377

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   +ID +    +   +
Sbjct: 14  DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK +V+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKYEL---MITKLGKSLVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   ++ L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CIIPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|319791003|ref|YP_004152643.1| hypothetical protein Varpa_0310 [Variovorax paradoxus EPS]
 gi|315593466|gb|ADU34532.1| protein of unknown function DUF140 [Variovorax paradoxus EPS]
          Length = 388

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 177/372 (47%), Gaps = 13/372 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + G       G W +  +S +     +  ++  +  +D    DL  I ++D IGA+L+  
Sbjct: 25  QEGRQWTVATGRWTALGMSSLPAWQALSKSLAAAPPADDRAWDLRPIEQLDHIGAQLLWE 84

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                              Q  +++    +  +           +  +   ++  + +V 
Sbjct: 85  HWRHEWPATL-----EMEAQHKAVLDQVAQYTVATPVEPPKTLADRIRTFSHNGPRAMVV 139

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +     ++G +  + G    + ++           +Y  G + + +  L+  + G 
Sbjct: 140 ----ARDFIGLIGQLAIDVGTLIRAPHRAP--WRDFSGHLYQFGATALHITALVGLLIGV 193

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A   + QL  +GAE F ++++ +  +RE+G +L AV+IAGRSGSAI A+IG M++ EE
Sbjct: 194 VLAYLISQQLRNYGAEAFVVNILGLSLVRELGPVLAAVLIAGRSGSAITAQIGVMRVTEE 253

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     L+ PR+ AL I++PL+++  + +A++G  +      DI  A F S 
Sbjct: 254 LDAMRVMGIPHGFRLVMPRVLALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFLSA 313

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 +AN++  + K+      I ++    G  V  ++ SLG+  T+ VV SI+ VI++
Sbjct: 314 LPRAVPIANLWLAMAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVILV 373

Query: 361 DSLFAIFYFAIG 372
           D+LFA+ +  IG
Sbjct: 374 DALFAVLFKGIG 385


>gi|283953736|ref|ZP_06371267.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794777|gb|EFC33515.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 369

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 111/364 (30%), Positives = 185/364 (50%), Gaps = 13/364 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69
           G W    I ++    +      IQS   I D   + +IDT G    +     ++  + KI
Sbjct: 16  GIWDKASIYKLK---IKDFLTLIQSKEVIFDFKDLEKIDTAGVRFFLALENDLKNKNIKI 72

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
             QG+++    LF L    +++  K +K  ++     F     ++GK  ++ +       
Sbjct: 73  TKQGLNSRFLTLFELCEKNYQRLNKTKKSHKN-----FSEYFINLGKLSLELLKILREFI 127

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           +  G   ++      +   F+  L++ +  +       +P+VIL + + G V+A Q A+Q
Sbjct: 128 NFTGAFFTSLFLCLKNPKNFR--LIAFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 185

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+ TMG 
Sbjct: 186 LAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGF 245

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                +I PR+ AL++++PL+  +++  +I+G  ++     DI FA F  RF     + +
Sbjct: 246 RSFEFIIIPRVMALVVAMPLIVAISDAISIVGGMMIAKLNLDISFAEFLRRFREAVDIKH 305

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I  GL+KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF++   
Sbjct: 306 ILIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 365

Query: 370 AIGI 373
           + GI
Sbjct: 366 SAGI 369


>gi|220934666|ref|YP_002513565.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995976|gb|ACL72578.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 375

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 180/368 (48%), Gaps = 8/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R AG      +S +  + +  + K        VD S +   D  G  L++  + + 
Sbjct: 16  GVVLRLAGRLDVHTVSTVWGEALAGL-KVRSGRPVRVDTSGVDYCDGAGVALVVDLLRQP 74

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                  G+    E++  ++     +    +    +        L  H+   +       
Sbjct: 75  RDPGAEVGLGETPEEVRRMLVPFDVRDFSGE----AVPPQRGPGLKQHLANGMHDLGRYL 130

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
             Q   +G   +          + +      +      G + +P+V+LI+F+ G ++A Q
Sbjct: 131 YLQVAFVGEATAAMFHAARHPRQVR--WRDALNLAQEAGANALPIVMLIAFLMGVILAFQ 188

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A  + QFGAEIF  +L+++  LRE+  L+TA+++AGRSG+A  AEIG+MK+NEEI+A+ 
Sbjct: 189 SAVAMRQFGAEIFVANLVALSLLRELAPLMTAILLAGRSGAAFAAEIGTMKVNEEINALT 248

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMGLD VR L+  R+ A +  +PLLT++AN   ++G ++V+  + DIPF  +F++  S  
Sbjct: 249 TMGLDPVRFLVVTRVLAAVAVMPLLTLVANLVGLVGGAVVMKGF-DIPFVTYFNQVTSAV 307

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           TL+++  GL KA      +  V    G      + ++G   T  VV +I ++++ D +FA
Sbjct: 308 TLSDLLGGLFKATVFGLLVAGVGCLRGLETRSGAAAVGISTTRAVVSAIILIVVADGVFA 367

Query: 366 IFYFAIGI 373
           + ++ + I
Sbjct: 368 VVFYHLDI 375


>gi|325293034|ref|YP_004278898.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325060887|gb|ADY64578.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 386

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 163/370 (44%), Positives = 224/370 (60%), Gaps = 6/370 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G   +  +G+W++  +S I   +   I KS  +    +DLS++  IDT GA +I    
Sbjct: 22  SGGGQRYALSGSWRNSNLSGIFARLEN-IEKSGPAGPVEIDLSSVEAIDTTGAWVIRRLR 80

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           E    K     ++ + E++  LI     K     +P         +     IG+ +V+  
Sbjct: 81  EDMEAKGVTVTLTGN-ERIEDLIGQLPDKAAMEGEP--VAKVGLAERFFSPIGQAVVQNG 137

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            D  +  +ILG  +                  +++ Q+ ++GV  VP+++L+SF+ GA+I
Sbjct: 138 ADFLAGMYILGSAVRGAQMKLGRGRGVSP--AAIVNQIDHMGVRAVPIIMLMSFLIGAII 195

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID
Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 255

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV   Y  I F VF SR H
Sbjct: 256 ALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVTLLYSGITFEVFLSRLH 315

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                + I  G+IKAPFMA  IGIVA  EG  VG  + SLGK VT+ VV+SI +VI++D 
Sbjct: 316 GAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDG 375

Query: 363 LFAIFYFAIG 372
           LFAIFY AI 
Sbjct: 376 LFAIFYAAID 385


>gi|241767246|ref|ZP_04764987.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241362094|gb|EER58209.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 373

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 172/364 (47%), Gaps = 12/364 (3%)

Query: 11  FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
             G W + E+ + +    + A  +   + +   DL  +  +D +GA+L+     +     
Sbjct: 21  LLGRWGAAELGQRSQWRALSAQLRDNTAPAGGWDLRGLDWLDHVGAQLLWDHWGQAW--- 77

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
                     +L         +      P          +   H+G  ++  ++ +    
Sbjct: 78  ------PGRLELTDPQRAMLERVGAFTAPPPPAEPWRLADQADHLGVLVLHGLDHARHVV 131

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G +  +      + ++       +   +Y +G + +P+  L+ F+ G V+A   + Q
Sbjct: 132 QLIGQLALDLLRLVRAPHRAP--WRDMSGHVYRMGATALPITALVGFLIGVVLAYLMSLQ 189

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L Q+GAE F ++++ I  +RE+G +L A+++AGRSGS+I A+IG M++ EE+DA+R MG+
Sbjct: 190 LRQYGAESFIVNILGISLIRELGPMLAAILVAGRSGSSITAQIGVMRVTEELDAMRVMGI 249

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                L+ PR  AL +++PL+++    +A+ G  +       I  A F     +   + N
Sbjct: 250 PHGFRLVMPRTLALALAMPLISVWTTLAALAGGMLAADVSMGISPAYFVEALPAAVKIGN 309

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +     K+      I ++    G  V  ++ SLG+  T  VV SI++VII+D+LFA+ + 
Sbjct: 310 LGLATAKSVVFGALIALIGCHWGLRVKPNTQSLGEGTTASVVTSITMVIIVDALFAVAFK 369

Query: 370 AIGI 373
            IGI
Sbjct: 370 NIGI 373


>gi|157415866|ref|YP_001483122.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|157386830|gb|ABV53145.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307748503|gb|ADN91773.1| ABC transporter, permease protein, putative [Campylobacter jejuni
           subsp. jejuni M1]
 gi|315931385|gb|EFV10354.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 369

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LIKFTNFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL++++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVVLTSAGI 369


>gi|210135633|ref|YP_002302072.1| ABC transporter permease protein [Helicobacter pylori P12]
 gi|210133601|gb|ACJ08592.1| ABC transporter permease protein [Helicobacter pylori P12]
          Length = 377

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|146305413|ref|YP_001185878.1| hypothetical protein Pmen_0373 [Pseudomonas mendocina ymp]
 gi|145573614|gb|ABP83146.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp]
          Length = 379

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 122/371 (32%), Positives = 203/371 (54%), Gaps = 5/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +  +  R  G+W     S +   V+    +        VDL  +  +DT GA L++  
Sbjct: 13  STDAASGLRIGGDWTLAHYSRLEPQVLALRERL--HGQESVDLDELAALDTAGAALLVEL 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           +     +   Q  +   E+  +L+         +Q+ Q+    ++ + +  HIG+ +   
Sbjct: 71  LGSERLRQLAQQDNLSTER-RALLLAVADAMAGSQQVQQHATPSALREVLGHIGEAVETT 129

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                     +GL +S          +++  L SL   +   G++ VP+V L++F+ GAV
Sbjct: 130 WCHGRELLGFMGLTLSGMLTILLRPARWR--LTSLAAHLEQCGLNAVPIVALLTFLVGAV 187

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L+ FGA I++++L++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEI
Sbjct: 188 VAFLGATILADFGASIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEI 247

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DAIRT+GL  + +L+ PR++A++I+LP+LT +A  S I+G ++V     DIP  ++ S  
Sbjct: 248 DAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGAVVCAVSLDIPLTMYMSIL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             +  L +   GL+KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI++D
Sbjct: 308 QDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVILLD 367

Query: 362 SLFAIFYFAIG 372
           +L A+F   +G
Sbjct: 368 ALAALFLMEMG 378


>gi|82702739|ref|YP_412305.1| hypothetical protein Nmul_A1612 [Nitrosospira multiformis ATCC
           25196]
 gi|82410804|gb|ABB74913.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 384

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 111/366 (30%), Positives = 191/366 (52%), Gaps = 5/366 (1%)

Query: 9   FRFAGNWKSPEISEIADD--VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
               GNW     + + +   ++   ++ + +    VDL  +  +DT GA  +   +    
Sbjct: 21  LNVRGNWTLENYAALGEQIALLRHRSRGLAAAGRNVDLGGLAALDTAGAARLYELLG-AE 79

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +L        +  +L+    +      K  +     +F  +  H G  +  F     
Sbjct: 80  LAGELAASDALSRERSALLLMVAKAMEAAGKVSQRRQRGAFIEIFGHAGVALEIFRQQIL 139

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G  +           +++  L S++ Q++  G++ VP++ L++F+ GAVIA  G
Sbjct: 140 ALLGFMGFTLDALARGLLHPKRWR--LTSIVAQIHETGLNAVPIIALLNFMVGAVIAFLG 197

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L+ FGA I++++L++   LRE+GVLLTA+++AGR+ S   A++GSMKINEEIDA R 
Sbjct: 198 ATVLANFGASIYTVNLVTFAFLRELGVLLTAILMAGRTASTFTAQLGSMKINEEIDATRV 257

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ V +L+ PR+ AL +SLP+LT +   S I+G ++V     DI  A+F + F     
Sbjct: 258 LGLNPVNLLVLPRVLALFVSLPILTFVGMISGILGGALVCALQLDISLAMFLTIFQDQIE 317

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +   G+ KAP  A  IG++   EG  V   + S+G+  T  VV SI +VI +D++ A+
Sbjct: 318 LRHFLVGMSKAPVFAFVIGVIGCLEGLKVSGSALSVGQHTTASVVHSIFVVIFLDAMAAL 377

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 378 FFMEMG 383


>gi|208435334|ref|YP_002267000.1| ABC transport system permease [Helicobacter pylori G27]
 gi|208433263|gb|ACI28134.1| ABC transport system permease [Helicobacter pylori G27]
          Length = 377

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     +   +GK IV+  
Sbjct: 72  KERSLSIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETC 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSILFSKLNI 377


>gi|148925785|ref|ZP_01809473.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145845795|gb|EDK22886.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 369

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 112/369 (30%), Positives = 184/369 (49%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  + +++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKESLNSRFQILFELCEKNYQRLGKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      ++ PR+ AL+I++PL+  +++  +IIG  +V     DI FA F  RF   
Sbjct: 241 NTMGFRSFEFIVIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVILTSTGI 369


>gi|119385048|ref|YP_916104.1| hypothetical protein Pden_2317 [Paracoccus denitrificans PD1222]
 gi|119374815|gb|ABL70408.1| protein of unknown function DUF140 [Paracoccus denitrificans
           PD1222]
          Length = 364

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 122/366 (33%), Positives = 198/366 (54%), Gaps = 19/366 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V R AG +    + ++  +            ++ ++LS +T +DT  A  +     +   
Sbjct: 18  VLRLAGEFTVWTLGQLPPE---------AGTASRLELSGLTRLDTAAAWYLT---GRERE 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              L G++    QL   +          Q    S     ++ +    G+++V  +     
Sbjct: 66  GASLDGLTGTQAQLLDTVRQAL-----PQPEAESAGPAGWRLMLEQTGRRMVAALVFLRE 120

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
            A  LG  ++           F+    SL+      G+  VP+V L+SF+ G V+A QGA
Sbjct: 121 IAEYLGRFLAALARGIRHPGDFR--FTSLVYHCQETGLRAVPIVALMSFLIGIVLAFQGA 178

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGAE+F IDL++I  LRE+G+LLTA+++AGR+ SA+ A IGSMK+NEEIDA+RT+
Sbjct: 179 VQLRQFGAEVFVIDLIAISILRELGILLTAIIVAGRTASALTASIGSMKMNEEIDAMRTL 238

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD   +LI PR+ ALII+LP+L ++AN + ++G +++ W    I  ++F  R  +  ++
Sbjct: 239 GLDPDMVLILPRVLALIITLPILGLIANIAGLVGGALMSWIELGISPSMFRYRLLADTSV 298

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++    G  VG  + SLG + +  VV +I  VI+ D+LF+IF
Sbjct: 299 DHVIVGLSKAPVFALIIGVIGCHAGMKVGKDAESLGAETSRAVVNAIFAVIVADALFSIF 358

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 359 FSEVGL 364


>gi|217033903|ref|ZP_03439327.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10]
 gi|216943666|gb|EEC23111.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10]
          Length = 377

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 178/371 (47%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y     L   +GK IVK  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKHYEL---LITKLGKSIVKTY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSAFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIIFSKLNI 377


>gi|207091861|ref|ZP_03239648.1| hypothetical protein HpylHP_01931 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 377

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGADSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|312797432|ref|YP_004030354.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
 gi|312169207|emb|CBW76210.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454]
          Length = 390

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 16/370 (4%)

Query: 9   FRFAGNWKSPEISEIADD-----VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            R  G W +  ++           +  +  +      + DLS I  +D +GA+ +     
Sbjct: 31  IRLGGQWTALSLALDQRRGGIAAKLRTLRDAAARADTLWDLSPIQRLDHVGAQALWQIWG 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           ++        ++    ++F  I+     +   +         +  +    +G  +  F  
Sbjct: 91  RHLPCGLS--LTDTQREIFERIALLDATREPAEP-------AAAIDPITRLGLAVFGFAG 141

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG ++ + G       +       +   +Y  G   +P+  L++F+ G V++
Sbjct: 142 HLRDGITLLGGLVIDCGRLLRDPRRIP--WSEISANVYAAGAQALPITALVAFLIGIVLS 199

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L A+++AGRSGSAI A++G M++ EE+DA
Sbjct: 200 YLSAQQLRLFGANAYIVNILGLSIIRELGPVLAAILVAGRSGSAITAQLGVMRVTEELDA 259

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL I  +  A+ G  +      +I  + F     S
Sbjct: 260 MRVMGISHGLRLILPRVIALGVAMPLLVIWTDAIALAGGMLAAQLVLNIDMSFFIRSLPS 319

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I +V    G  +  +S SLG+  TT VV SI++V++ D++
Sbjct: 320 VVPVANLYLGLGKGVAFGMLIALVGCHFGLRIKPNSQSLGEGTTTSVVSSITVVMLADAV 379

Query: 364 FAIFYFAIGI 373
           FAI +  IG+
Sbjct: 380 FAIMFQRIGL 389


>gi|302039183|ref|YP_003799505.1| putative ABC transporter permease [Candidatus Nitrospira defluvii]
 gi|300607247|emb|CBK43580.1| putative ABC-type transport system, permease component [Candidatus
           Nitrospira defluvii]
          Length = 373

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 112/368 (30%), Positives = 181/368 (49%), Gaps = 15/368 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62
               R  G W  P+++ +   +           + + + S I   DT GA ++   +   
Sbjct: 15  GRTLRCRGAWTMPDVAPVERALRRM--TWPARSALVFEASGIEAFDTGGAVVLYRALMEA 72

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +   ++ +QG+     QL SL+S      +    P+++                I   +
Sbjct: 73  RRQGCEVSIQGLRPDYAQLMSLVSSHWAAMVAEVAPRQNGS--------ERFRASIRNRV 124

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    LG   +      AS  + +    S +  +   GV  +P+  L++F+ G VI
Sbjct: 125 AQGAGALEFLGESATALVRLVASPRRLR--WRSCLNSLRLDGVHALPITGLLTFLIGVVI 182

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL +FG  IF +DL+ I  LREI  L+ A++IAGRSGSA  A+IG+MK+ EE+D
Sbjct: 183 AYQGAEQLRKFGTNIFIVDLVGISLLREIAPLIAAILIAGRSGSAYAAQIGTMKVTEELD 242

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++T GL  + +L+ PR+ AL+++LPLLT  A+   + G  ++     ++ F  F SRF 
Sbjct: 243 ALQTFGLSPIELLVLPRVLALVVALPLLTAYADVLGVFGGMLIASNQLNVSFTAFLSRFE 302

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L ++  GL KAPF A  I +V   +GF +    + +G+  T  VVQSI +VII D+
Sbjct: 303 EAVALRHMLIGLGKAPFFAVIIALVGCYQGFQIRGGVDDVGRHTTISVVQSIFLVIIFDA 362

Query: 363 LFAIFYFA 370
           + +I    
Sbjct: 363 ICSILLNW 370


>gi|15965586|ref|NP_385939.1| hypothetical protein SMc00174 [Sinorhizobium meliloti 1021]
 gi|307302706|ref|ZP_07582462.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C]
 gi|307318554|ref|ZP_07597988.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83]
 gi|15074767|emb|CAC46412.1| Probable ABC transporter [Sinorhizobium meliloti 1021]
 gi|306895894|gb|EFN26646.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83]
 gi|306903070|gb|EFN33661.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C]
          Length = 379

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 152/371 (40%), Positives = 216/371 (58%), Gaps = 10/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +      + F+G+W+      +A  +     +      +  D S IT +DT GA +I  F
Sbjct: 18  AAGNGRRYVFSGDWRHETAEAMAAKLKRL--EKPAGGQSEFDFSGITRMDTAGAWIIRRF 75

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           M     +++  G   + E + +L     R        + +     F+ L   +G+  V  
Sbjct: 76  MNGTADEVRFTGGERYAELVRALPKQLRR------PEESATRMPLFQRLFTPVGELTVSI 129

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+ +   ILG  +                  +++ Q+  +GV   P++ L+SF+ GA+
Sbjct: 130 WTDTVAAMFILGSAVRGAQMKLGRHAGVSP--AAIVHQIDRMGVMATPIITLMSFLIGAI 187

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+
Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL  V +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y DI    F +R 
Sbjct: 248 DALKVMGLSPVGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWTYSDITIPTFLARL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                 +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++VT+ VV+SI +VI+ID
Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367

Query: 362 SLFAIFYFAIG 372
            LFA+FY AI 
Sbjct: 368 GLFAMFYAAID 378


>gi|298735565|ref|YP_003728086.1| putative ABC transport system permease protein [Helicobacter pylori
           B8]
 gi|298354750|emb|CBI65622.1| putative ABC transport system permease protein [Helicobacter pylori
           B8]
          Length = 377

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F+ +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|328954405|ref|YP_004371739.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454729|gb|AEB10558.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 418

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G      +G  +  +++  + ++   + +  Q  S  +DL  +  +D+ GA  ++   E
Sbjct: 57  DGGQKLLISGRLELFDLAIFSREI-QPLLQQPQLSSVGLDLGGLEYLDSAGALAVLQLAE 115

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K   +  +  +     ++  ++     + + +                  +G+  + F  
Sbjct: 116 KLKSQGIICTLDNISPKIKKILDLIDIQALTHPP---LITVGKRFGWISQVGEASLAFWR 172

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D        G ++ +    C    + +     ++  M   GV G+P+V LI  + G +IA
Sbjct: 173 DIIEVIAFFGELLLDLASVCLRPRRVR--WEYVMFYMKRAGVDGLPIVSLIGLLLGLIIA 230

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL QFGA I+   L+ +  +RE+G ++TA+++AGRSGSA  AEIGSMK++EE+DA
Sbjct: 231 FMSSLQLQQFGANIYVASLLGVAMVRELGPIMTAILVAGRSGSAFAAEIGSMKVSEEVDA 290

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG + +R+L +P++ A ++ +PLLTI A+   IIG  IV     D+    +      
Sbjct: 291 LTVMGFNPMRMLTTPKVIASLVVVPLLTIYADLLGIIGGLIVGVTMLDLTVYSYIQETRR 350

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             TL +  +  IK+   A  I  +  + GF V   ++++G   T+ VV +I ++I++DS+
Sbjct: 351 ILTLFDFTSSFIKSVVFAFLIAAIGCQRGFQVRGGASAVGSATTSAVVAAIFLIIVVDSI 410

Query: 364 FAIFYFAI 371
           FAI    +
Sbjct: 411 FAIVLTYV 418


>gi|254779978|ref|YP_003058085.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
 gi|254001891|emb|CAX30141.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
          Length = 377

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      +I     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  KERSLNIELCNVSENNACALKVIKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGTLQLQDMGAPLVSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSIVFSKLNI 377


>gi|126666401|ref|ZP_01737380.1| ABC transporter, permease protein, putative [Marinobacter sp.
           ELB17]
 gi|126629202|gb|EAZ99820.1| ABC transporter, permease protein, putative [Marinobacter sp.
           ELB17]
          Length = 387

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 110/364 (30%), Positives = 191/364 (52%), Gaps = 4/364 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G+W  P    +   V  A   S +     ++L  +  IDT GA L+   +  ++ +
Sbjct: 27  ISACGDWTLPYYHALYSSVTAAGQDSDRYQ--TLNLQTLGRIDTAGAALLAELVGPHNLE 84

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
             L      + +  + +       + +Q+P  +    +   L   +G  + +      + 
Sbjct: 85  QWLADNPQAVSRETAALLSAVATAMADQQPLPAPPGFTLSGLVRDVGAWVNELYQLVVTL 144

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G +I+          +++    + +  +   G++ VP+V L++F+ GAV+A  GA 
Sbjct: 145 IGFIGQIIAALAWTTLHPRRWRM--TAFVAAVQDTGLNAVPIVALLTFLVGAVVAFLGAT 202

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ FGA I++++L++   LRE GVLL A+++AGR+ S+  A+IG+MK+NEE+DA+RT+G
Sbjct: 203 VLADFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASSFTAQIGAMKVNEELDALRTLG 262

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           L  + +L+ PR+ A+++SLPLLT +   S ++G ++V     DI    F S       L 
Sbjct: 263 LSPIELLVLPRVLAMMVSLPLLTFVGMISGMVGGALVCSMTLDITPTQFISIVSQDVALK 322

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL KAP  A  I  VA  EGF V   + S+G   T+ VVQSI +VI+ DS+ A+F+
Sbjct: 323 HLLVGLSKAPIFAFLIAAVACLEGFKVSGSAQSVGVHTTSSVVQSIFMVILFDSIAALFF 382

Query: 369 FAIG 372
             +G
Sbjct: 383 MEMG 386


>gi|86152962|ref|ZP_01071167.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843847|gb|EAQ61057.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 369

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 110/369 (29%), Positives = 184/369 (49%), Gaps = 13/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKITKEGLNSRFQILFELCEKNYQRLGKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      ++ PR+ AL++++PL+  +++  +IIG  ++     DI F  F  RF   
Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMIAKLNLDISFVEFLRRFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360

Query: 365 AIFYFAIGI 373
           ++   + GI
Sbjct: 361 SVVLTSAGI 369


>gi|218780630|ref|YP_002431948.1| hypothetical protein Dalk_2788 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762014|gb|ACL04480.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 377

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++   ++ R  G         +A  +  AI K   +   ++DL  +T +D  GA L+ + 
Sbjct: 13  NDGKGSILRLHGPLDQDAYFALAGPLRQAIKKGC-AGELVIDLKDVTRLDDFGALLLAHV 71

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            +  H       +      +  ++   H +++ N        +    N    +G  I+  
Sbjct: 72  HKAAHAVNSPCSIEAARPSVREVLDLLHFQRLINAPALEKPKHE---NPFVALGGAIIDK 128

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +  +       G V+          +  +     ++  M  VGV  VP+V LI+F+ G +
Sbjct: 129 VLGAKELIDFTGDVLLCAAIVVRHPFSMR--WDDMLTAMRKVGVDAVPIVGLINFLLGFI 186

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   + QL QFGA I+   L++I  +RE+G ++TA+++ GRSGSA  +EIG+MKI+EE+
Sbjct: 187 MAFMTSVQLKQFGANIYVAPLVAIAMVRELGPIMTAIVVTGRSGSAFASEIGAMKISEEV 246

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMG + V  L+ P++ A +I +P+LT+ A    I+G  +V   + D+  + + S  
Sbjct: 247 DALSTMGFNPVVFLVMPKMTAAMIVMPILTVFACLFGILGGLLVGVVFLDLTLSNYLSET 306

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             + ++  +     KA   A  I  +    GF V   S+++G+  T+ VV  I ++I+ D
Sbjct: 307 IDSLSMYAVNWCFFKAVVFAFLITWIGCLRGFQVKGGSSAVGEATTSSVVSGIFLIILWD 366

Query: 362 SLFAIF 367
            +FA  
Sbjct: 367 CIFAFI 372


>gi|307825468|ref|ZP_07655686.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
 gi|307733354|gb|EFO04213.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
          Length = 379

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 178/372 (47%), Gaps = 14/372 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G +  +  G+W    +   A ++   I+    + +   DLS+I  +D+  + ++    
Sbjct: 20  SDGQSCVKLTGSWNLRSLVT-ATELNRKISSHAANKNIQWDLSSIEVLDSASSLILWKAW 78

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG-KKIVKF 121
            K         +    ++LF         + + QK        S  +L    G +    F
Sbjct: 79  GKKLP--VALQLKPEHQRLFD--------RWQAQKIPEPEPVGSSSSLIIKYGYQLFANF 128

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    +LG +  + G               +   +Y  GV  + +  L+ F+ G V
Sbjct: 129 WGQLLQLVTLLGQLFLDIGYLLLHPGDIP--WSEISITIYESGVRALGITALVGFLIGIV 186

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FGAEI+ ID++ +  +RE+G LL A+++AGRSGSA+ A+IG M++ EE+
Sbjct: 187 LSYLSALQLKIFGAEIYIIDILGLSVIRELGPLLAAILVAGRSGSAMTAQIGIMRVTEEL 246

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+     L  P++ AL I LPL+ +  +  A+IG  +      DI +  FF + 
Sbjct: 247 DALSAMGISHSLRLTLPKVMALTIVLPLIGVWTSALALIGGMVSAQNTLDISYQQFFLKL 306

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L N+F GL K+      I ++A   GF +  ++ SLG + T  VV +I++VI++D
Sbjct: 307 PDVVPLTNVFIGLGKSAVFGLMIALIACHFGFRIKPNTESLGNETTNSVVAAITVVIMVD 366

Query: 362 SLFAIFYFAIGI 373
           ++FAI +  +G+
Sbjct: 367 AVFAILFMNVGM 378


>gi|317013234|gb|ADU83842.1| putative ABC transport system permease protein [Helicobacter pylori
           Lithuania75]
          Length = 377

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 14  DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 STFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 VFSIVFSKLNI 377


>gi|186474974|ref|YP_001856444.1| hypothetical protein Bphy_0205 [Burkholderia phymatum STM815]
 gi|184191433|gb|ACC69398.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 379

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 175/370 (47%), Gaps = 14/370 (3%)

Query: 8   VFRFAGNWKSPEISEIA----DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           + R +G W +  ++           +      ++  A  DLS +  +D +G + +     
Sbjct: 19  IVRLSGQWTALALARDRLHGQALPRLRELVDSRAHVAQWDLSNVERMDHVGGQALWRVWG 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
            Y     L  ++     +F  I+     +   +  +R        +    +G  I  F+ 
Sbjct: 79  -YKLPRDLVALNDTQRDIFDRIALLDTVRENPEPVRR-------FDPFTQLGLGIFSFVE 130

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  + G VI +      +          +   +Y  G   +P+  L++F+ G V++
Sbjct: 131 HVYGGVAMFGRVILDLLSIARNPKLAP--WKEISANVYSAGTQALPITALVAFLIGIVLS 188

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  F ++++ +  LRE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 189 YLSAQQLRLFGANQFIVNILGMSVLRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 248

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  +++G ++       I  + F      
Sbjct: 249 MRVMGIPHGLRLILPRVIALSLAMPLLVMWTNIISLLGGALAAKLVLQIDVSYFVRALPG 308

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 309 VVPVANLWIGLGKGMVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVSSITIVILADAV 368

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 369 FAILFQNVGL 378


>gi|330501346|ref|YP_004378215.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01]
 gi|328915632|gb|AEB56463.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01]
          Length = 381

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 120/371 (32%), Positives = 202/371 (54%), Gaps = 5/371 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +  +  R  G+W     S++   V+    +        VDL  +  +DT GA L++  
Sbjct: 15  STDAASGLRLGGDWTLAHYSQLEPQVLALRERL--HGKESVDLGDLAALDTAGAALLVEL 72

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                 +  +Q      E+  +L+         +   Q +   +  + +  HIG+ +   
Sbjct: 73  FGSERLRQLIQQA-ELDERRRALLLTVADAMAGSAPAQAASEPSVLREVLGHIGEVVEGM 131

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +   +    +GL +++         +++  L SL   +   G++ VP+V L++F+ GAV
Sbjct: 132 WHQGRALLGFMGLTLTSMLAILVRPMRWR--LTSLAAHLEQCGLNAVPIVALLTFLVGAV 189

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA  L+ FGA I++++L++   LRE GVLLTA+++AGR+ SA  A+IGSMK NEEI
Sbjct: 190 VAFLGATILADFGATIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEI 249

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DAIRT+GL  + +L+ PR++A++I+LP+LT +A  S I+G  +V     DIP  ++ S  
Sbjct: 250 DAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGGLVCAVSLDIPVTMYLSIL 309

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             +  L +   GL+KAP  A  I ++   EGF V   + S+G+  T+ VVQSI +VI++D
Sbjct: 310 QDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVILLD 369

Query: 362 SLFAIFYFAIG 372
           +L A+F   +G
Sbjct: 370 ALAALFLMEMG 380


>gi|163759630|ref|ZP_02166715.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
 gi|162283227|gb|EDQ33513.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
           DFL-43]
          Length = 428

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 148/370 (40%), Positives = 221/370 (59%), Gaps = 4/370 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             G       G+W+   I+ +  +++  + K I     ++DLS ++  DT GA L+   M
Sbjct: 62  SGGRQRLALWGDWRHAAIAGVYGELLS-VQKKISGADLVIDLSDLSNFDTAGAWLVRKTM 120

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
               G+     +    + +  L+S          +   +     F+ +   +G+ + +  
Sbjct: 121 VVAKGQGASVEIEGASKPVSGLLSAIPD-PADRAEVAATERAPLFQRIFAPVGRALYELF 179

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +D  +  +ILG  +                  +++ Q+ ++GV  VP+++L+SF+ GA+I
Sbjct: 180 DDLIASMYILGSAVRGAQLKL--DRSAGISPAAIVTQIDHMGVRAVPIIMLMSFLIGAII 237

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           AQQGAFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+D
Sbjct: 238 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVD 297

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +GL+ V +L+ PR+ AL ++LPLLT++ANF+A+ GA+ V W Y  I   VF SR  
Sbjct: 298 ALKVIGLNPVGVLVFPRLVALTVALPLLTVVANFAALAGAAAVAWSYSGITPDVFTSRLR 357

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +  + +G+IKAPFMA  IGIVA  EG  VG  + SLG++VT  VV+SI +VI++D 
Sbjct: 358 EAIDMTTVASGMIKAPFMALIIGIVASVEGMKVGGSAESLGRRVTASVVKSIFVVILVDG 417

Query: 363 LFAIFYFAIG 372
           LFAIFY AI 
Sbjct: 418 LFAIFYAAID 427


>gi|237747194|ref|ZP_04577674.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
 gi|229378545|gb|EEO28636.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
          Length = 374

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 178/370 (48%), Gaps = 13/370 (3%)

Query: 5   GITVFRFAGNWKSPEISE--IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           G T     GNW+   ++   + + +   +    +  S   DL+ I E+D IGA+L+    
Sbjct: 15  GNTCVIARGNWRVESLAASGVINRIRSTVRSFSKKGSVSWDLTQILELDYIGAQLLWDNW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            K   +  L   ++   +LFS +      ++  +KP     +   +              
Sbjct: 75  NKTRPRELLV--TSEQNKLFSRLESAGNLQLPAEKPAHWQLFGRIRKFPQ-------AAA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y+ G   + +  ++ F+ G V+
Sbjct: 126 EHFSGIVGLVGQLMIDLARFAKAPH--RGPWTEISANIYHAGAQALGITAIVGFLIGVVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FG ++F ++L+ +  +RE+G LL A+++AGRSGS++ A++G M++ EE+ 
Sbjct: 184 SYLSAQQLHMFGGDVFLVNLLGMSVIRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELS 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MG+     LI P++ AL I +PLL I  +  A++G  +       +    F S   
Sbjct: 244 AMQVMGMSHGFRLIMPKVIALSIVMPLLIIWTDIVALLGGMLAASFEIGLSIPYFLSALP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   +AN + G+ K       I ++A   G  +  ++ SLG+  T  VV SI+IVI+ D+
Sbjct: 304 NAVPMANFWIGIGKGIVFGILIALIACYYGMKIKPNTESLGQGTTNSVVTSITIVILADA 363

Query: 363 LFAIFYFAIG 372
           +FA+    +G
Sbjct: 364 IFAVVLQGVG 373


>gi|121603099|ref|YP_980428.1| hypothetical protein Pnap_0182 [Polaromonas naphthalenivorans CJ2]
 gi|120592068|gb|ABM35507.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans
           CJ2]
          Length = 382

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 180/372 (48%), Gaps = 20/372 (5%)

Query: 11  FAGNWKSPEIS--EIADDVVMAI-------NKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
             G W +  ++   + D +   +         S    +    LS + ++D +GA+++   
Sbjct: 22  LQGAWTAANLTQKPLWDALAAQLKALRAQTASSASPAALRWSLSPLEKLDYLGAQVLWSA 81

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
              +        +      +   +     + +   +P       S+      +G++++  
Sbjct: 82  WNHHWPAGLQ--IEPEQRAMLETVEKFTVRPLPPPRP-------SWLEPVLMLGERLLSL 132

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           ++ +     +LG ++ + G       +       L   +Y  G + +P+  L+ F+ G V
Sbjct: 133 LSHAKGMLRLLGQLLLDMGRLVRHPQQGP--WRDLSGHLYNFGATALPITALVGFLIGVV 190

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   + QL QFGA+ F ++++ I  +RE+G +L A++IAGRSGSAI A+IG M++ EE+
Sbjct: 191 LAYLISQQLRQFGADAFIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVMRVTEEL 250

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R MG+     L+ PR  AL + +PL+++    +A++G  +       +  + FF+  
Sbjct: 251 DAMRVMGIARGFRLVMPRAMALALVMPLISVWTTIAALLGGMLAADISMGVTPSFFFNAL 310

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   ++N+     K+      I ++    G  V  ++ SLG+  T  VV SI++VI++D
Sbjct: 311 PAAVKVSNLVLATAKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSITVVILVD 370

Query: 362 SLFAIFYFAIGI 373
           +LFA+ + ++GI
Sbjct: 371 ALFAVLFKSVGI 382


>gi|28974221|gb|AAO64222.1| putative ABC transport system permease protein Cf0016
           [Campylobacter fetus]
          Length = 367

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 107/369 (28%), Positives = 179/369 (48%), Gaps = 20/369 (5%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
              V +  G +      +   ++              +DL  +  ID   A        K
Sbjct: 19  DNAVLKLDGEFDYTMDKKSLKELRSL-------KVDTLDLKNLIRIDYSAATFFA----K 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           ++   KL   +   +++F+L+S  +   ++  K ++S       NL   IGK I+   N+
Sbjct: 68  HYNCPKLINSNDKFDKIFALVSDKYILNLQIIKFKKS-------NLIEQIGKNIINLKNE 120

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    LG  + N  +   + +  +     L    Y  G+S V +V L SF+ G V+A 
Sbjct: 121 LVSFCIFLGEFLFNLTKSLLNPFTVR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAY 178

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QGA  L  FGA I+ +D+M I+ LRE+G L+ A+++AGRS S+  A+IG MKI +E++A+
Sbjct: 179 QGATMLENFGASIYVVDIMGIMTLREVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAM 238

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           +TMG +  R ++ P  +         +I +      G  +V   Y D+ F+ +  RF S+
Sbjct: 239 KTMGFEPFRFIVMPACFGSYFGYAFYSIFSKRGKYFGQMMVCNWYLDLSFSDYLERFRSS 298

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L + + GL KAPF    I ++  K GF V   +NS+G+  T  VV +I  +I +D++F
Sbjct: 299 IALRHFWVGLFKAPFFGAVIALIGCKRGFEVSGSTNSVGELTTRSVVNAIFWIIALDAIF 358

Query: 365 AIFYFAIGI 373
           +I Y  + I
Sbjct: 359 SIIYTELKI 367


>gi|317011599|gb|ADU85346.1| putative ABC transport system permease protein [Helicobacter pylori
           SouthAfrica7]
          Length = 377

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +          +D SA  ++D +    +   +
Sbjct: 14  DGADSVLILRGDWDFKTSVFRLDELKKILLDH--QGPLKMDFSACQKVDFVFGMFLFDLV 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           +     I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 72  KGRSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---LITKLGKSIVETY 128

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  RFH
Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 367 IFSIVFSKLNI 377


>gi|116749843|ref|YP_846530.1| hypothetical protein Sfum_2414 [Syntrophobacter fumaroxidans MPOB]
 gi|116698907|gb|ABK18095.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 384

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 86/374 (22%), Positives = 164/374 (43%), Gaps = 12/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
              + +    GNW+  +     D ++       +      D   + E D+     ++  +
Sbjct: 20  REDVLLVGLRGNWRIADEPIPVDAIIREFESDPRIRILAFDTGELGEWDSSLLTFLIKVI 79

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           +   +   +    G+   + +L SL S         ++  +             +G + +
Sbjct: 80  DTGVRRGLEADRTGLPEGVGRLLSLASAVPEATDARRQEAKQP-------FLTRVGTQAI 132

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       LG       +      + +     L+  +   G   +P+V LIS + G
Sbjct: 133 SLAAAVGQMMEFLGEAAIAFFQLVRGRARLRRV--DLMTLIQDCGADALPIVSLISVLVG 190

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            ++A  GA QL  FGA+I+  DL+ +   RE+G ++TAV++AGR+G+A  A++G+M++NE
Sbjct: 191 LILAFVGAVQLRMFGAQIYVADLVGLGMAREMGAMMTAVIMAGRTGAAFAAQLGTMQVNE 250

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA++T+G+  +  L+ PR+ AL++ +P L + A+   I+G  IV      +    ++ 
Sbjct: 251 EIDALQTLGVSPMEFLVLPRMLALVLMMPFLCLYADLMGILGGGIVGVGMLGLSPLEYYH 310

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L +   GLIK       I +     G   G  S ++G   T+ VV  I  +++
Sbjct: 311 ETVQAVGLMDFGAGLIKGAVFGVLIALSGCLRGMQCGRSSAAVGLATTSAVVTGIVAIVV 370

Query: 360 IDSLFAIFYFAIGI 373
            D++  + Y  +GI
Sbjct: 371 SDAILTVIYDRLGI 384


>gi|305432464|ref|ZP_07401626.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter coli JV20]
 gi|304444503|gb|EFM37154.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter coli JV20]
          Length = 371

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 109/362 (30%), Positives = 179/362 (49%), Gaps = 13/362 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69
           G W    +S+I    +  +   I   + I D S + EID  G    +     ++K    I
Sbjct: 18  GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLALEHDLKKNDILI 74

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
             QG++T  + LF L    +++  + Q+ + +     F +    +G      +       
Sbjct: 75  LKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILSFDLLKILQKFI 129

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           +  G   ++      +   F+   +S +  +       +P+VIL + + G V+A Q A+Q
Sbjct: 130 NFTGAFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 187

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG MKI +EI+A+ TMG 
Sbjct: 188 LAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEINAMNTMGF 247

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                +I PR+ AL+I++PL+  L++  +I+G  +V     DI F  F  RF     + +
Sbjct: 248 RSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFLRRFREAVEMKH 307

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I  GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF++   
Sbjct: 308 IIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 367

Query: 370 AI 371
            +
Sbjct: 368 IM 369


>gi|223936767|ref|ZP_03628677.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894618|gb|EEF61069.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 384

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 96/374 (25%), Positives = 177/374 (47%), Gaps = 12/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G      +G+WKS E+      V   ++      +   D+S +T   +    L+M   
Sbjct: 20  ETGKLQVVASGDWKSGEVFPDVGGVSNKLDVDESIRALSFDVSKVTSWSSGLIGLVMRCR 79

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           E   +        G+   +++L  L            + + +    +   +   IG  ++
Sbjct: 80  ELAMERKIAFDQSGLPQSVQRLIVLALAV-------PEKKDARSLQTRPGIFEKIGLGVL 132

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       +G              +++     +   M   G   +P+V LI+F+ G
Sbjct: 133 GLRRSGEETLKFIGDCTIAFLALAKRKARYR--WTEVWLIMQQCGPDALPIVALINFLVG 190

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A++A  GA QLS+FGA I+  DL+ I  +RE+GV++ AV++ GR+G+A  A++G+MK+N+
Sbjct: 191 AILAFVGAVQLSKFGAAIYVADLVGIATMREMGVIMMAVIMCGRTGAAFAAQLGTMKVNQ 250

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA +T+G+  +  L+ PRI  L +  P+L I A+  AI+G  +V     +  FA ++ 
Sbjct: 251 EIDAYKTLGISPIEFLVMPRIMCLWLMFPVLCIFADLMAIVGGGVVALAMLNFSFAEYWQ 310

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              +  TL + F G++K+      + + +   G   G  + ++G   T+ VV  I++++I
Sbjct: 311 ETVAAVTLTHFFIGIVKSFVFGVLVAMTSCLRGIQCGNDAAAVGLATTSAVVTGITVIVI 370

Query: 360 IDSLFAIFYFAIGI 373
            D++FA+     GI
Sbjct: 371 ADAIFAVILNVFGI 384


>gi|222148407|ref|YP_002549364.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735395|gb|ACM36358.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 376

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 149/365 (40%), Positives = 224/365 (61%), Gaps = 11/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--FMEKYH 66
            R +G+W++  +  +   ++    +   +    +D++ I+ +DT GA +I          
Sbjct: 19  LRLSGSWRNTTVDTVIPKLLEL--RETLNGHVEIDITGISSLDTSGAWIIRRIELAASKQ 76

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
           G +++ G S  + +L S +      +      +       F+ +   +GK  V    D  
Sbjct: 77  GDVQIVGGSDAMRELISAL-----PEQPPLPEKVVDRRPFFQRVLEPVGKMSVSLFEDVL 131

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           + +++LG  +  T        +      S++ Q+ ++G+  VP+++L+SF+ GA+IAQQG
Sbjct: 132 AMSYVLGSAVRGTQSKERRGGRASI--ASIVNQLDHMGLRAVPIILLMSFLIGAIIAQQG 189

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           AFQL  FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ 
Sbjct: 190 AFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKV 249

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL+ + +L+ PRI AL+I+LPLLT++ANF+A+ GA++V + Y  I F VF +R H    
Sbjct: 250 IGLNPIGVLVLPRIVALVIALPLLTVIANFAALYGAAVVSFAYSGITFQVFVTRLHDAVD 309

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            A    GLIKAPFMA  IGIVA  EG  VG  + SLG+ VT  VV+SI +VI++D LFA+
Sbjct: 310 YATFAAGLIKAPFMAVVIGIVAAVEGMKVGGSAESLGQHVTASVVKSIFVVILMDGLFAV 369

Query: 367 FYFAI 371
           FY AI
Sbjct: 370 FYAAI 374


>gi|56479165|ref|YP_160754.1| ABC transporter permease [Aromatoleum aromaticum EbN1]
 gi|56315208|emb|CAI09853.1| Possible ABC transport permease [Aromatoleum aromaticum EbN1]
          Length = 374

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 176/371 (47%), Gaps = 12/371 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                  R  G+W    ++  AD+    + ++    +A   L  +T +D+ GA L+ +  
Sbjct: 14  SGARPECRLEGDWTLRALAPRADEFRRLLARA--GPAASWKLDGVTRLDSFGATLLWHAW 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +             +     L +   R +    +P       +  +    +G  ++ F 
Sbjct: 72  REQW--------PQDLSADDELRAVIGRIEATAAEPLPEARAFTLTDAIVVLGAGLLGFA 123

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +   + G +  +          +   L  +   +Y VG    PV  L+ F+ G V+
Sbjct: 124 NHLAAFVQLAGQLCLDIAYLLRHPRDWP--LREISANLYKVGARATPVAALVGFLIGVVL 181

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA+I+ ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ +E+D
Sbjct: 182 SYLSALQLQAFGADIYIVNILGLGIVRELGPVLVSVLVAGRSGSAMTAQLGVMRVTDELD 241

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  MG+     L+ P++ AL +++PLL +  +  A+ G  +  W   D+ F  F     
Sbjct: 242 ALSAMGISRTVRLVLPKVVALTVAMPLLVLWTSAVALFGGMVSAWVQLDLGFGFFLDTLP 301

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ GL K      +I +VA   G  V  ++ SL    T  VV +I++VI+ID+
Sbjct: 302 RVVPVANLYIGLAKGAVFGLSIALVACHFGLRVRPNTESLSANTTASVVSAITVVILIDA 361

Query: 363 LFAIFYFAIGI 373
           +FAI   +IG+
Sbjct: 362 VFAIATRSIGV 372


>gi|298292077|ref|YP_003694016.1| hypothetical protein Snov_2101 [Starkeya novella DSM 506]
 gi|296928588|gb|ADH89397.1| protein of unknown function DUF140 [Starkeya novella DSM 506]
          Length = 382

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAIN--KSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            VF   G W + +   +   V  A+   K    ++A +DLS +   DT+GA ++   +  
Sbjct: 18  LVFVGNGRWVAGQGRALEGGVDTALAELKVGAVETARLDLSGVRGFDTVGAVMVDRLLRA 77

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                    +     +   L+    +        +     N+       +G+ +V    D
Sbjct: 78  LEVAGVRFQIVGLERRFRPLLDEIVKGSHDVPPRRH--HVNAVIGGIQLVGQTVVNTGRD 135

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           S      +G V++           F+G   S++  +   G+  VP++ LI+F+ G +IAQ
Sbjct: 136 SLVFLSFIGAVVAALLRVIVRPQTFRG--TSMVYHLERTGLRAVPIIALITFLIGCIIAQ 193

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG F   +FGA  + +D++ IL LRE+GVL+ ++M+AGRSGSA  AE+GSM++ EE+DA+
Sbjct: 194 QGIFHFRKFGATTYVVDMVGILTLRELGVLIVSIMVAGRSGSAFTAELGSMRMREEVDAL 253

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG D   +L+ PR+ ALII++PLLT + N  A+ G  +V W Y  I   +F +R    
Sbjct: 254 RVMGFDPNEVLVLPRLVALIIAVPLLTFIGNMCALFGGGLVAWLYGGISPEIFLNRLQEA 313

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L     G+IKAPFMA  +G++A  EG  VG  + SLG   T  VV++I +VI++D LF
Sbjct: 314 IALNTFEVGMIKAPFMAAIVGLIACMEGMRVGGSAESLGAHTTAAVVKAIFLVIVVDGLF 373

Query: 365 AIFYFAIGI 373
           A+F+ AI +
Sbjct: 374 AMFFAAIDM 382


>gi|57168794|ref|ZP_00367925.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
 gi|57019841|gb|EAL56524.1| conserved hypothetical integral membrane protein [Campylobacter
           coli RM2228]
          Length = 371

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 109/362 (30%), Positives = 179/362 (49%), Gaps = 13/362 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69
           G W    +S+I    +  +   I   + I D S + EID  G    +     ++K    I
Sbjct: 18  GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLALEHDLKKNDILI 74

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129
             QG++T  + LF L    +++  + Q+ + +     F +    +G      +       
Sbjct: 75  LKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILSFDLLKILQKFI 129

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
           +  G   ++      +   F+   +S +  +       +P+VIL + + G V+A Q A+Q
Sbjct: 130 NFTGTFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 187

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L+QFGA IF +DL+ I   RE+  L+ A++IAGRS S+  A+IG MKI +EI+A+ TMG 
Sbjct: 188 LAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEINAMNTMGF 247

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
                +I PR+ AL+I++PL+  L++  +I+G  +V     DI F  F  RF     + +
Sbjct: 248 RSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFLRRFREAVEMKH 307

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I  GL KAP     IG++A   GF V   + S+G   T  VV +I  VI  D+LF++   
Sbjct: 308 IIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 367

Query: 370 AI 371
            +
Sbjct: 368 IM 369


>gi|312115045|ref|YP_004012641.1| hypothetical protein Rvan_2318 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220174|gb|ADP71542.1| protein of unknown function DUF140 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 385

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 118/372 (31%), Positives = 189/372 (50%), Gaps = 10/372 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G      +G+W    + +    V         +    +D+  +  +DT GA  ++   
Sbjct: 21  ERGTRRLIVSGDWTLAALGDAQAAVDDFEAPHGAAHE--IDIGDVRRLDTAGALTLVGLR 78

Query: 63  --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             +                 L   I+       +   P+        +            
Sbjct: 79  DGKAAAKTADFFRARPEHRILLDEIARAAPAAFEPPPPRAGAAVEILRRFLS----AATS 134

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              D+      LG   +  G       +F+    +   Q+   G+S VP++ L+SF+ G 
Sbjct: 135 IGRDAIRLTMFLGETTAALGRVVVHPGRFRI--KAFTHQLQQTGLSAVPIIALVSFLIGG 192

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+ QQ AFQL +FGAE  SID++ IL LRE+GV+L AVM+AGRS SA  A+IG+MK+ EE
Sbjct: 193 VVMQQSAFQLQKFGAETMSIDMLGILALRELGVILAAVMVAGRSASAFTAQIGTMKMREE 252

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+RT+G+D +  L+ PR+ AL+I+LPLL  LA+  A+ G +++   Y  +   ++  R
Sbjct: 253 IDAMRTLGIDPIETLVLPRVLALMIALPLLVFLADMMALAGGAVMAKLYLSLDTDMYLQR 312

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            +S+    +++ GLIKAPF A  IG+V   EG +    + S+G +VTT VV++I +V+++
Sbjct: 313 LNSSVQAKHLYVGLIKAPFAALVIGLVGCLEGLSAQGSAESVGTQVTTAVVKAIFLVLVL 372

Query: 361 DSLFAIFYFAIG 372
           D++FAIF  A G
Sbjct: 373 DAVFAIFLSAAG 384


>gi|270159818|ref|ZP_06188474.1| putative ABC transporter permease [Legionella longbeachae D-4968]
 gi|289165424|ref|YP_003455562.1| ABC transporter permease protein [Legionella longbeachae NSW150]
 gi|269988157|gb|EEZ94412.1| putative ABC transporter permease [Legionella longbeachae D-4968]
 gi|288858597|emb|CBJ12478.1| putative ABC transporter permease protein [Legionella longbeachae
           NSW150]
          Length = 375

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 181/370 (48%), Gaps = 14/370 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62
              +   G W   +I  +        ++  ++    +    I+  D+ GA  ++     +
Sbjct: 14  RIRYHCTGIWSVLQIDSLVKRFSA--DELPETKKVTISGEGISHFDSAGALALIKCIDKL 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           E+   +++L   +   +QL  LI         +            +NL Y +GK+     
Sbjct: 72  EQRENQVELTDFTETQQQLLELIKSKKDILDYHIP------SAPKENLFYQLGKESENKF 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G + +   E   +  +F   L S+I  +Y  GV+ +P++ L+SF+ G V+
Sbjct: 126 RQVDGLLVLVGDLTTKIIEAFGNWRRF--QLPSIISNIYTTGVTALPILALLSFLIGVVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  +GA  F   L  +   RE   L+TA+++AGR+ SA  A+IGSMK+NEE+D
Sbjct: 184 AYQMGLQLQTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAFTAQIGSMKLNEEVD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TMGL    +L+ P++  L+I+ PLL   ++  +I+G+ I+      I F  F  R  
Sbjct: 244 ALLTMGLSPTELLVLPKVIGLLIAFPLLIFWSDLFSILGSMIMSNNMLGINFTDFLQRLR 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVIIID 361
            T  L+ +  GL KAP  A  I +V   +GF V   +  ++G + T  VVQ++ ++II D
Sbjct: 304 DTVGLSQLNLGLYKAPAFALLIALVGCFQGFKVEAGTEKNIGSQTTKSVVQALFLIIIAD 363

Query: 362 SLFAIFYFAI 371
           +++++ Y  +
Sbjct: 364 AIYSVIYSRM 373


>gi|217031805|ref|ZP_03437308.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128]
 gi|216946457|gb|EEC25059.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128]
          Length = 367

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +V    G+W         D++   +       S  +D S   ++D +    +   +
Sbjct: 4   DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 61

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
           ++    I+L  VS +      ++     K+   +  +    Y     L   +GK IV+  
Sbjct: 62  KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---LITKLGKSIVETY 118

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   +  +  G+++    +   +  +F   +  L+  +   G   +PV IL  F+ G  +
Sbjct: 119 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 176

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  QL   GA + S+++ + L LREIG  +  +++AGRS S+  A+IG MKI EE+D
Sbjct: 177 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 236

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG +    L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F+ +  RFH
Sbjct: 237 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 296

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            T    +   G++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+
Sbjct: 297 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 356

Query: 363 LFAIFYFAIGI 373
           +F+I +  + I
Sbjct: 357 VFSIVFSKLNI 367


>gi|114764121|ref|ZP_01443360.1| ABC transporter, inner membrane subunit [Pelagibaca bermudensis
           HTCC2601]
 gi|114543479|gb|EAU46494.1| ABC transporter, inner membrane subunit [Roseovarius sp. HTCC2601]
          Length = 377

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 9/374 (2%)

Query: 1   MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +SE G   V   +G      +S +               S +VDL+ +  IDT GA L++
Sbjct: 12  LSETGAEAVLSLSGALSIRTVSVLRQRFAALGF----DRSLVVDLAGVERIDTAGAWLLV 67

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
               +        G+    +    L+    + + +  +  R       + L   IG+ +V
Sbjct: 68  DLEARAQAAGGSFGLRNVSDTTALLLDNVRQARPE--REDRPAAARGIQALLEQIGRAVV 125

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +         LGL ++  G       +F+  L +L+     VG+  VP+V L+SF+ G
Sbjct: 126 GGLRYFADLTGFLGLFLARLGRVLRHPSQFR--LTALVAHCEDVGLRAVPIVALMSFLIG 183

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG+ QL QFGAE+F +DL++I  LRE+G+LLTA+++AGR+ SA  A IGSMK+ E
Sbjct: 184 VVLAFQGSEQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRTASAFTAAIGSMKMRE 243

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+RT+GLD   +L  PRI AL++ LP+L ++A+F  + G +++ W    I  ++F +
Sbjct: 244 EIDAMRTLGLDPGVMLFVPRILALLLMLPILGLIADFMGLFGGALMAWLELGISPSMFVT 303

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R      + ++  GL+KAP  A  IG+V    G  V  ++ SLG+  +  VV +I  VI+
Sbjct: 304 RLIEGTGVGHLLVGLVKAPAFALIIGVVGCHAGMQVKGNAESLGRMTSGAVVAAIFAVIL 363

Query: 360 IDSLFAIFYFAIGI 373
            D+LF++F+  +GI
Sbjct: 364 ADALFSVFFAKVGI 377


>gi|182416429|ref|YP_001821495.1| hypothetical protein Oter_4625 [Opitutus terrae PB90-1]
 gi|177843643|gb|ACB77895.1| protein of unknown function DUF140 [Opitutus terrae PB90-1]
          Length = 376

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 18/374 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60
           +  +      G+W+  +      DVV     S +     + + A+   D+     +    
Sbjct: 18  DGNVLEVELGGSWRITDRRPAWMDVVS----SHRPAKLRLHVDAVERWDSSLLLFLFEIG 73

Query: 61  -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
            +            +   ++ L + ++ +H   + + +           N    +G   +
Sbjct: 74  EWCRANQVACDTTVLPPRVQTLLTQLASSHATSVPHDRS---------VNFLAVVGNATM 124

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +    +       G  +    +      KF+      + +M   G   +P+V LI+F+ G
Sbjct: 125 ELSRKTQDFVQFFGECVLGAVKLLKRPDKFR--WRDCLEEMQQCGAMALPIVSLIAFLVG 182

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +A  GA  L Q+G +I+  DL+ +  +RE+G ++TAV++AGR+G+A  A++G+MK NE
Sbjct: 183 VTLAYIGALVLRQYGGDIYVADLIGMAMVREMGAVMTAVVLAGRTGAAFAAQLGNMKANE 242

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+ T+G+  V+ L+ PR+ AL + +PLL + AN   I+G   V     DI  + ++ 
Sbjct: 243 EIDALETLGISPVQFLVMPRLLALGVMMPLLALYANALGILGGMAVSAGVLDISPSAYWV 302

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              +  TL ++ +G IKA      +G+     G      +  +G+  T+ VV SI ++++
Sbjct: 303 EMGTIVTLRDVASGFIKAIAFGGIVGLSGCLRGLQAERSAAGVGRAATSAVVTSILLLVV 362

Query: 360 IDSLFAIFYFAIGI 373
            D++FA+ +  IG+
Sbjct: 363 ADAIFAVLFNVIGL 376


>gi|148560485|ref|YP_001258960.1| putative toulene ABC transporter permease [Brucella ovis ATCC
           25840]
 gi|148371742|gb|ABQ61721.1| putative toulene ABC transporter, permease protein [Brucella ovis
           ATCC 25840]
          Length = 365

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 151/364 (41%), Positives = 212/364 (58%), Gaps = 3/364 (0%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W S  +  + DD +  I ++    + I+D+S I+ +DT GA LI    ++   
Sbjct: 3   VIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLRQRLAA 61

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           K     +    E    L+        +     R+     F      +G  ++   ND   
Sbjct: 62  KHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMFNDFKM 121

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             HILG  I                  +++ QM  +GV  +P+++L+S + GA+IAQQGA
Sbjct: 122 AMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIIVLMSTIVGAIIAQQGA 179

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           FQL  FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEI SMK+ EE DA+  +
Sbjct: 180 FQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEISSMKMREETDALTVI 239

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I    F SR H    L
Sbjct: 240 GLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLHDAVAL 299

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              F GLIKAPFMA  IGI+A  EG  VG  + SLG++VT  VV++I +VI++D LFA+F
Sbjct: 300 NTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDGLFAMF 359

Query: 368 YFAI 371
           Y AI
Sbjct: 360 YAAI 363


>gi|254496222|ref|ZP_05109116.1| ABC transporter, permease [Legionella drancourtii LLAP12]
 gi|254354527|gb|EET13168.1| ABC transporter, permease [Legionella drancourtii LLAP12]
          Length = 375

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 99/373 (26%), Positives = 181/373 (48%), Gaps = 14/373 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60
           +  +  F   G W   ++  +   +    +   ++    V+   I+ +D+ GA  ++   
Sbjct: 11  DEELAQFNCTGRWSVMDVGSLLKKITA--STLPKTQKIKVNGEGISHLDSAGALALIKCV 68

Query: 61  -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             +++   ++ L G S   +QL  LI                      +N  Y +GK+  
Sbjct: 69  NALKQRDNEVALVGFSKIQQQLLDLIQEKQGILDYQIP------SPPKENFLYKLGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +        ++G + +   +   +  +F     S++  +   G+  +P++ L+SF+ G
Sbjct: 123 TKLAQVDGLIILIGDLATKLFDAFGNWRRF--QWPSIMSNIDATGIKALPILALLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL+ +GA  F   L  +   RE   L+TA+++AGR+ SA  A++GSMK+NE
Sbjct: 181 VVLAYQMGLQLTTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAYTAQLGSMKVNE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+ TMGL    +L+ P++  L+I+ PLL   A+  +I+G+ I+      I F  F  
Sbjct: 241 EIDALLTMGLSPTELLVLPKVLGLLIAFPLLIFWADIFSILGSMIMANNMLGIGFLDFLQ 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVI 358
           R   +  ++    GL KAP  A  I +V   +GF V   +  ++G + T  VVQS+ ++I
Sbjct: 301 RLRDSVGISQFKLGLYKAPAFALLIALVGCFQGFRVEAGTEKNIGSQTTKSVVQSLFLII 360

Query: 359 IIDSLFAIFYFAI 371
           I D++++I Y  +
Sbjct: 361 IADAIYSIIYSWM 373


>gi|307720548|ref|YP_003891688.1| hypothetical protein Saut_0627 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978641|gb|ADN08676.1| protein of unknown function DUF140 [Sulfurimonas autotrophica DSM
           16294]
          Length = 368

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 180/369 (48%), Gaps = 13/369 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                 F+G      +++  + +    NK   S   I++L+    +DT  A  +    E+
Sbjct: 13  DGLSLDFSGELTLYNLTQAQNLIE--TNKLSNSQKIIINLANAQYLDTAFALFLTDIQEE 70

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           Y+ +I+    +        L     ++   N    +        ++  + GK   +    
Sbjct: 71  YNAEIECNNKNFLHT--LELTREHKKRLDSNDDIHKK-------SIFEYFGKIFYESYLS 121

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    +G +  +   +  S    +     +  ++    V  + +V L SF+ G V A 
Sbjct: 122 FISFMEFIGKIFISFLLYFKSIKNIRI--KEIAFEINESAVRALGIVALTSFLIGLVTAY 179

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL ++G  IF +D+M I   RE+  L+TA++IAGRSGSA  A+IG+MKI +EIDA+
Sbjct: 180 QAAYQLQRYGGNIFIVDMMGISVFRELAPLITAIVIAGRSGSAYTAQIGAMKITQEIDAM 239

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RTMG D    L+ PRI ALII LP+L  +++  A++G  IV     D+  ++F +R    
Sbjct: 240 RTMGFDPYTFLVLPRIIALIIMLPILIFVSDMMAMLGGIIVADLSLDLIPSLFINRLSEV 299

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + + + GL+K PF A  I  + +  G  V   + S+G   T  VV+S+  VI+ D++F
Sbjct: 300 VAIKHFYVGLVKGPFFAFLIASIGIYRGLMVKDDTQSIGFNTTKSVVESLFAVIVCDAIF 359

Query: 365 AIFYFAIGI 373
           +I +  +GI
Sbjct: 360 SIAFTNLGI 368


>gi|225165545|ref|ZP_03727365.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2]
 gi|224800218|gb|EEG18628.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2]
          Length = 371

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 92/363 (25%), Positives = 172/363 (47%), Gaps = 19/363 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS-AITEIDTIGAEL---I 58
           +  +   R  G W+           +  +    +     ++L+  +  +D+        I
Sbjct: 24  DGDLLRIRLGGRWRVTA----PRPSLAGVIGDRKPRRIRIELAPNLERLDSALLLFTHEI 79

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             + E++        +S  +  L + ++   + +  +         +   NL   IG+  
Sbjct: 80  RSWCEQHKTDYDTSALSPEVAALCNKLATATQAEPAH---------DRRTNLLTSIGEAT 130

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           ++ ++ +      LG  + +         KF+        +M   G   +P+V LISF+ 
Sbjct: 131 IETVDRATGIMSFLGECLLSFFHLARRPRKFR--WGDCSEEMQQCGAMALPIVGLISFLV 188

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A Q A  + QFGA+I+  D ++++  RE+G ++T +++AGR+G+A  A IG+MK N
Sbjct: 189 GVIMAYQSAVLMRQFGADIYVADAVALVMAREMGAMMTGIILAGRTGAAFAATIGNMKAN 248

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ T G+  V  L+ PR+ AL + +PLLT+ AN   I+G   V     DIP   ++
Sbjct: 249 EEIDALSTFGIRPVDFLVLPRLVALALMMPLLTLYANALGIVGGMGVAMGVLDIPPITYW 308

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +   L++I TGLIKA      +G+     G      ++ +G+  T+ VV  + ++I
Sbjct: 309 NQTVNALDLSDISTGLIKASCFGILVGLSGCHRGMNADRSASGVGRAATSAVVIGMLLII 368

Query: 359 IID 361
           I D
Sbjct: 369 IAD 371


>gi|197105491|ref|YP_002130868.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
 gi|196478911|gb|ACG78439.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1]
          Length = 375

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 111/371 (29%), Positives = 186/371 (50%), Gaps = 11/371 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                   G+W +  +      +  A++      +  +DLS +  +DT GA  ++     
Sbjct: 14  DRPTVALTGDWTARALGGAGTALAEALDGLT---NIAIDLSGVRRLDTAGAYAVVRAAGP 70

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                K       + +L  ++    R      +P        F +L   +GK +V F +D
Sbjct: 71  AFDASK-VEARPEVRRLLEVVDEAARI-----QPAVRQEPKGFHDLTIRVGKGVVGFGHD 124

Query: 125 SCSQAHILGLVISNTGEFCASSY--KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                  LG ++          +    K    +L+  M   G+  +PVV + +F  GAV+
Sbjct: 125 FIDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVSIMERAGLDAIPVVAVATFFIGAVV 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  GA  L QFGAE+F+++L+ I  +RE  +++TAV++AGRS S+  AEIGSMK+++EID
Sbjct: 185 AFIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMSQEID 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MG+D    L+ PR  AL+I++PLLT +A  + ++G  +V W    +  A F  R  
Sbjct: 245 AMKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFLQRIV 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + + +  L KAP MA  I  +  ++G   G    SLG++VT  VV +I  +I+ID+
Sbjct: 305 DNVGVDHFWIALSKAPVMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAIIVIDA 364

Query: 363 LFAIFYFAIGI 373
           +FA+ Y  +G+
Sbjct: 365 IFAMIYMELGL 375


>gi|170743041|ref|YP_001771696.1| hypothetical protein M446_4933 [Methylobacterium sp. 4-46]
 gi|168197315|gb|ACA19262.1| protein of unknown function DUF140 [Methylobacterium sp. 4-46]
          Length = 394

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 200/369 (54%), Gaps = 4/369 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                R  G+W + +   +                  VDLS +  +DT+GA ++     +
Sbjct: 30  DGVQARLTGSWTADQAPAVEAAAAAIAAPGEPGPRVQVDLSGLVRLDTLGAFVLERTRSE 89

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                +    +    +   L+     ++                +    +G  + +   +
Sbjct: 90  IEAAGRAVDYAGARPEHRILLREVAYRRDTPP--PPRRRRLGLLDGLEALGAGLRRLGAE 147

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    LG V++      A   +F+    S + QM  +   G P+++LI+F+ G ++ Q
Sbjct: 148 GLSWLGFLGEVVAACLRVLARPRRFRA--ASFVNQMEQIAYRGTPIIMLIAFLVGCIVTQ 205

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG  QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA  AEIGSM++ EE+DA+
Sbjct: 206 QGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDAL 265

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MGLD + ILI PRI AL+++LP+L  LA+ +A++G ++    Y ++ F  F +R  + 
Sbjct: 266 RVMGLDPIEILIVPRILALMLALPMLGFLADVAALLGGALTSMAYGNLSFDAFLARLQAV 325

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            ++ +   G++KAPFMA  IGI+A  EGF V   + SLG+ VT  VV+SI +VI++D +F
Sbjct: 326 ISVRHGLVGMLKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGVF 385

Query: 365 AIFYFAIGI 373
           AIF+ AI +
Sbjct: 386 AIFFAAIDL 394


>gi|255019625|ref|ZP_05291705.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Acidithiobacillus caldus
           ATCC 51756]
 gi|254970928|gb|EET28410.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Acidithiobacillus caldus
           ATCC 51756]
          Length = 380

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 171/365 (46%), Gaps = 13/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G W    ++   D V   + ++ +      DL AI  +D++GA +I          
Sbjct: 26  LTLRGRWTLRRLTGAMDRVREQLAQAGRGRP--WDLRAIERLDSVGALVIWRAWG----- 78

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
               GV     +L +      R+  + Q P               +G  I+  + D    
Sbjct: 79  ----GVLPADARLSAEQEAVFRRFAQMQTPTAPRRPWGLWARLDALGAHILGVLVDLWGL 134

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG +++           F      +   +   G   +P++ LI F+ G VI+ Q A 
Sbjct: 135 FLLLGALLTELWRALRHPRHFP--WREISATVVRTGPDSLPILSLIGFLIGIVISFQSAP 192

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+ +GA I+ I +  +  LRE G L+TAV++AGR+GSA  A+IG+M++ EE+DA+RT G
Sbjct: 193 TLASYGANIYIISIAGLSILREFGPLITAVILAGRTGSAFTAQIGAMRVTEELDALRTFG 252

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  V+ LI P++ AL I+LPLL +  +  AI+GA IV      I  + F           
Sbjct: 253 ISPVQRLILPKVIALAITLPLLVVWTDAVAILGAIIVAKLDLGISASFFLREMPIMVPDF 312

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N + G+ K       I  V+   G  V  +++SL ++ T  VV ++++VI+ID++ A+ +
Sbjct: 313 NFWLGIGKGILFGILIAWVSGYHGLKVQPNTDSLSRETTDSVVLTLTLVIVIDAVLAMVF 372

Query: 369 FAIGI 373
              GI
Sbjct: 373 ANTGI 377


>gi|91776717|ref|YP_546473.1| hypothetical protein Mfla_2365 [Methylobacillus flagellatus KT]
 gi|91710704|gb|ABE50632.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT]
          Length = 373

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 175/370 (47%), Gaps = 11/370 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63
           G       G W    +     ++  A+      + A  DL+ + ++DT GA ++   +  
Sbjct: 14  GGKRIVLNGQWSLRALDNDFAELRRALKPYFSDEKAQWDLTQVEQLDTAGAAVLWNGWQG 73

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K  G++    ++     LF  ++      +  + P+       +  L    GK  +   +
Sbjct: 74  KMEGRVT---LTDEQVALFDTLASIETTTVAEKPPRFD-----WLKLVAGFGKLTIFISS 125

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  ++GL++   G        F          +Y  GV+ +PV  L+ F+ G  ++
Sbjct: 126 HVVDFVKLIGLLVLELGYLLRRPQDFP--WREFSANIYKSGVTALPVTALLGFMIGIAMS 183

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA+IF ++++ +  +RE+G +L AV++AGRSGS++ A+IG M++ EEIDA
Sbjct: 184 YLMATQLRTFGADIFIVNILGLAVIRELGPILMAVLVAGRSGSSMAAQIGVMRVTEEIDA 243

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + TMG+  +  ++ P++  L +  P L I  +  A++G ++       + F  FF    +
Sbjct: 244 LATMGISRILRVVLPKVLGLTVIAPFLVIWTSCWALLGGALSANIELGLGFRFFFDYLAA 303

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                NI  GLIK       + ++A   G  +  ++ SL +  T+ VV +I+ VI+ID+ 
Sbjct: 304 VVQPVNITLGLIKGVMFGFIVAVMACHFGLRIKPNTESLSRSTTSSVVTAITCVILIDAA 363

Query: 364 FAIFYFAIGI 373
           FAI    IG+
Sbjct: 364 FAIITSGIGV 373


>gi|329905881|ref|ZP_08274264.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
 gi|327547452|gb|EGF32273.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
          Length = 372

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 175/368 (47%), Gaps = 15/368 (4%)

Query: 7   TVFRFAGNWKSPEISE--IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           +V   +G W+   +++  +   +  A+ +  +      DL+ IT ID IGA+ +     K
Sbjct: 17  SVIVASGAWQVHALADAGVIGQLDAALARLTKPTG--WDLTQITAIDHIGAQWLWNVWGK 74

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                 +  +S   ++ F  +       +   +  R             +G +       
Sbjct: 75  TRPPGLV--LSDRQDEFFQRLEQAGPLTLPEVQKPRWKQ-------LIRLGARTQSLTGH 125

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG ++ +   F  +    +G    +   +Y  G   + +  L+  + G V++ 
Sbjct: 126 LIDVVGLLGQLMFDLRRFALNPR--RGPWKEISSNIYRTGYQALGITALVGMLIGVVLSY 183

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FG +I+ ++++ +  +RE+G LL A+++AGRSGS+I A++G M++NEE+DA+
Sbjct: 184 LSAQQLHSFGGDIYLVNILGMSIIRELGPLLAAILVAGRSGSSITAQLGVMRVNEELDAM 243

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MGL     LI P++ AL I++PLL I  +  A++G  +       +    F  +    
Sbjct: 244 LVMGLPHGFRLIMPKVLALAIAMPLLVIWTDAMALLGGMVAANLELGLSPRYFLHKLPDA 303

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             LAN + G+ K       I +VA   GF +  ++ SLG   T+ VV +I++VI+ D++F
Sbjct: 304 VPLANYWIGIGKGVVFGGLIALVACHFGFRIKANTESLGAGTTSSVVTAITVVILADAVF 363

Query: 365 AIFYFAIG 372
           AI +  +G
Sbjct: 364 AIVFSGVG 371


>gi|150396764|ref|YP_001327231.1| hypothetical protein Smed_1554 [Sinorhizobium medicae WSM419]
 gi|150028279|gb|ABR60396.1| protein of unknown function DUF140 [Sinorhizobium medicae WSM419]
          Length = 379

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 149/371 (40%), Positives = 213/371 (57%), Gaps = 10/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +      + F+G+W+      ++  +            +  D S IT +DT GA +I  F
Sbjct: 18  AAGNGRRYVFSGDWRHETAEAMSAKLKRL--GKPAGGQSEFDFSGITAMDTAGAWIIRRF 75

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           M     +++  G   + E + +L                +     F+ L   +G+  V  
Sbjct: 76  MNGTADEVRFAGSDRYAELILALPKQLR------SPEGETARAPLFQRLFAPVGELTVSI 129

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             D+ +  +ILG  +                  +++ Q+  +GV   P++ L+SF+ GA+
Sbjct: 130 WTDTVAAMYILGSAVRGAQMKLGRHAGVSP--AAIVHQIDRMGVMATPIITLMSFLIGAI 187

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IAQQGAFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+
Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MGL  + +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y  I    F +R 
Sbjct: 248 DALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARL 307

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                 +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++VT+ VV+SI +VI+ID
Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367

Query: 362 SLFAIFYFAIG 372
            LFAIFY AI 
Sbjct: 368 GLFAIFYAAID 378


>gi|308272474|emb|CBX29078.1| hypothetical protein N47_J00590 [uncultured Desulfobacterium sp.]
          Length = 381

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 181/368 (49%), Gaps = 8/368 (2%)

Query: 1   MSEN--GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
           +SE+  G     F G   +     I   ++  ++ S+   S   DL  ++  D  G  ++
Sbjct: 14  ISEDKEGFFTIHFHGEMDAQSSPGIIGKLLGEVD-SLSLLSITADLDDVSYFDDFGLLVL 72

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
           +   +    K     V+ +  +  +++      +   ++       N  +     +G+ +
Sbjct: 73  IELQKAAKNKNSSFNVTDNSGKAKNILYLL---ESNFERSVLPAKQNRLQLKITQLGESV 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  I++S      +G V  +  + C      +      I  M   GV+ +P++ LISF+ 
Sbjct: 130 LDNISNSRVFVSFIGSVALSFYQICRHPKSLRIN--DTILHMEKTGVNALPIIALISFLL 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G VIA   + QL QFGA ++   L+SI  + E+G ++TA++IAGRSGSA  AEIG+MKI+
Sbjct: 188 GLVIAFMSSLQLEQFGANLYVASLVSIGMVSELGPIMTAIVIAGRSGSAFAAEIGTMKIS 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE DA+  MG D    L  PRI A II +PLLT+ A+  AI G  +V     D+  + + 
Sbjct: 248 EETDALFVMGFDPTLFLAVPRILASIIVVPLLTLFADIFAIAGGLVVGVFILDLTTSSYL 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +   L  I  G+ K+   A  I  V    GF     ++++G   T+ VV SI ++I
Sbjct: 308 TQTMNVLNLFEICWGISKSIVFAVIISWVGCLRGFQTKGGADAVGNAATSAVVSSIFLII 367

Query: 359 IIDSLFAI 366
           +IDS+FAI
Sbjct: 368 LIDSMFAI 375


>gi|57505618|ref|ZP_00371545.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
 gi|57016165|gb|EAL52952.1| conserved hypothetical integral membrane protein [Campylobacter
           upsaliensis RM3195]
          Length = 377

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 101/338 (29%), Positives = 165/338 (48%), Gaps = 10/338 (2%)

Query: 39  SAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
             I+D   +  ID  G    +     ++K     +   +S   + LF L    +++ +K 
Sbjct: 47  QCILDFHHLEFIDMAGVRFFLALEYELQKRGITSQRVHLSEKFDALFELCEKNYQRILKE 106

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
            K            L  ++G   +  +         +G   +   +       F+   ++
Sbjct: 107 PKKHFDT-----AELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQCFKKPKTFR--FVA 159

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
            +  +    +  +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I   RE+  L+
Sbjct: 160 FLYHIENSALKALPIVILTALLVGVVLAYQTAFQLAQFGANIFIVDLVGISATRELAPLI 219

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++IAGRS S+  A+IG MKI +EI A+ TMG      +I PR+ AL++++PL+  +++
Sbjct: 220 AAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVVALVVAMPLIVAVSD 279

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F +I G  +V     DI F  F  RF     L ++  GLIKAP     IG++A   G  V
Sbjct: 280 FVSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEV 339

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              + S+G   T  VV +I  VI  D+LF++    +GI
Sbjct: 340 KHTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 377


>gi|52842264|ref|YP_096063.1| ABC transporter, permease [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629375|gb|AAU28116.1| ABC transporter, permease [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 374

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 109/374 (29%), Positives = 184/374 (49%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E     ++  G+W    +  +      + +    S    ++   I+  D+ GA  +    
Sbjct: 11  EQKNATYQCCGSWSVLTLDGLPKKF--STSPLPDSQQITINGEKISAFDSAGALALKKCI 68

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +I+L   S   +Q+  LI                      + + Y IGK+  
Sbjct: 69  DELKKRNNQIELVNFSDSQQQMLELIESKQDILSYQLPAVSK------EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F S
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|54297975|ref|YP_124344.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris]
 gi|53751760|emb|CAH13182.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris]
          Length = 374

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 108/374 (28%), Positives = 185/374 (49%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E     ++  G+W    +  +      +I+    S    ++   I+  D+ GA  +    
Sbjct: 11  EQKNATYQCCGSWSVLTLDGLPKKF--SISPLPDSQQITINGEKISVFDSAGALALKKCI 68

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +++L   S   +Q+  LI                      + + Y IGK+  
Sbjct: 69  DELKKRNNQVELVNFSDSQQQMLELIESKQEILSYQLPAVSK------EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F +
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|114332197|ref|YP_748419.1| hypothetical protein Neut_2236 [Nitrosomonas eutropha C91]
 gi|114309211|gb|ABI60454.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91]
          Length = 381

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 173/372 (46%), Gaps = 12/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E G +  +  G++    ++     V   + +         DL+ I ++D  GA ++   
Sbjct: 18  TEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDLTNIHQLDYAGAVMLWQI 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +      L  +    EQ+F  +          Q+                +G+++++F
Sbjct: 78  WGEQRPDHLL--LRPEQEQMFQRLEKVVSLPEPTQRKWFLP--------VSLLGQQLLRF 127

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +       + G ++ +         +       +   +Y  G   + +  ++ F+ G V
Sbjct: 128 FDHLAGMISLSGQIVLDIVYLMTHPSRIPV--REISANLYRTGAQALGITAIVGFLIGIV 185

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   + QL   GA+I+ ++++ +  +RE+G +L A+++AGRSGSA+ A++G M++ EE+
Sbjct: 186 LSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTEEL 245

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+     L+  +I  L ++LPL+ +  +  A++G  +       +      +  
Sbjct: 246 DALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRYAVTTL 305

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +AN++ GL K      AI ++A   G  +  ++ SLG+  T  VV SI+ VIIID
Sbjct: 306 PDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVIIID 365

Query: 362 SLFAIFYFAIGI 373
           ++FA+ + +IGI
Sbjct: 366 AIFAVAFSSIGI 377


>gi|332162490|ref|YP_004299067.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666720|gb|ADZ43364.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 354

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 180/340 (52%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           ++ Q  S + DL+ +  +DT GA L+   +         +      E+  +L+    R  
Sbjct: 16  RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                       + +     + G+ +     D  S    +GL +           +++  
Sbjct: 76  PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWRM- 134

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  
Sbjct: 135 -TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT 
Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   EG
Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353


>gi|107023833|ref|YP_622160.1| hypothetical protein Bcen_2286 [Burkholderia cenocepacia AU 1054]
 gi|105894022|gb|ABF77187.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU
           1054]
          Length = 425

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 33/366 (9%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     V   I        +  DLS I  +D +G + +     +   
Sbjct: 92  TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 151

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 152 AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+                           +
Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIAL----------------------PGVVPI 358

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 419 FQNVGL 424


>gi|315453380|ref|YP_004073650.1| ABC transport system permease protein (pseudogene) [Helicobacter
           felis ATCC 49179]
 gi|315132432|emb|CBY83060.1| putative ABC transport system permease protein (pseudogene)
           [Helicobacter felis ATCC 49179]
          Length = 369

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 8/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                GNW     ++    +   +  +    +  VD   +  +D +   L+   + +   
Sbjct: 12  TLFLRGNWDFKTPAQTLLRLEKLLKNAPPIRA--VDFREVERLDFVFLMLLYDLLGR--K 67

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           K  +   + +   +  ++    ++       + S       N    +G+ IV F N   +
Sbjct: 68  KPAILNANAYNAHVLEVVQHWVKEDPSILSREHSKPPK--INPLNKLGQSIVDFFNTMLN 125

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             +  G+V+   G            L  LI  ++  G   +PV IL  FV G  IA QGA
Sbjct: 126 TFNFCGMVLYFLGRAIIKPKTL--CLTPLIHHIHESGFKVLPVSILTVFVVGFAIALQGA 183

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL Q G  + SI++ + L LRE+G  +  +++AGRS S+  A+IG MKI EE+DA+ TM
Sbjct: 184 IQLQQLGFPLMSIEMTAKLALREMGPFILTLVVAGRSASSFTAQIGVMKITEELDAMHTM 243

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL     L+ PR+ AL+I +PL+  +A+  A++G  + I     + F  + +R H    L
Sbjct: 244 GLSPFAWLVLPRVLALVIVMPLMVFIADAFALLGTMVAIKYQLGVTFNHYIARLHENVGL 303

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++ F GLIKAPF   AI IV    GF V   + S+G   T  VV ++  +I +++LF++ 
Sbjct: 304 SHFFVGLIKAPFWGFAIAIVGCMRGFEVKGDTESIGTLTTISVVNALFWIIFLNALFSVI 363

Query: 368 YFAIGI 373
           +  + I
Sbjct: 364 FSKLNI 369


>gi|323524591|ref|YP_004226744.1| hypothetical protein BC1001_0219 [Burkholderia sp. CCGE1001]
 gi|323381593|gb|ADX53684.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001]
          Length = 389

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
           + R +G W +  ++        +    +          DLS I  +D +G + +      
Sbjct: 31  IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +L      I +  +L+           +           +    +G  I  F+ 
Sbjct: 91  RMPPDTELTDTQRDIFERIALLDTVRETAEPVVRF----------DPFTRLGLAIFSFLE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  + G V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HLYGGVAMFGRVVLDLLAIARKPAITP--WTEISANVYNAGTKALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  T+ VV SI+IVI+ D++
Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTSSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|318606570|emb|CBY28068.1| ABC-type transport system involved in resistance to organic
           solvents, permease component USSDB6A [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 354

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 180/340 (52%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           ++ Q  S + DL+ +  +DT GA L+   +         +      E+  +L+    R  
Sbjct: 16  RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                       + +     + G+ +     D  S    +GL +           +++  
Sbjct: 76  PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEVLFSTIFRPSRWRM- 134

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
             SLI  +  +G++ VP+++L++F+ GAVIA  GA  L+ FGA IF++DL+    LRE  
Sbjct: 135 -TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT 
Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I G  +V     DI   +F S   ++  L +   G+ KAP  A  I I+   EG
Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G   TT VV SI +VI++D++ A+F+  +G
Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353


>gi|83720699|ref|YP_440931.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|83654524|gb|ABC38587.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 404

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +   
Sbjct: 49  TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALWRVWGRRLP 108

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                        L         +  +    + +       +     G+ +  F      
Sbjct: 109 AGI---------ALTDNQRTVFERIERLDAGREAPEPVVRIDPVTRFGQGLFTFGEHLYG 159

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 160 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 217

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 218 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 277

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 278 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 337

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 338 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 397

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 398 FQNVGL 403


>gi|289208500|ref|YP_003460566.1| hypothetical protein TK90_1322 [Thioalkalivibrio sp. K90mix]
 gi|288944131|gb|ADC71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix]
          Length = 382

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 185/370 (50%), Gaps = 16/370 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMYF---ME 63
            + +G      +  +   +     +  +    +  +D+  +   D  GA L+      +E
Sbjct: 24  LQLSGRLDVHAVERVWSPLRRRARELAEGTQAAVTLDVGGLEYCDGAGAALLHALERDIE 83

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +   +++L GV   +E+  +        +           + +   L     + + +   
Sbjct: 84  RAGRQVELVGVQGLVEEQLTPYRELETVE--------PARHETRGGLLAQSFEAVSRVGQ 135

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            + SQ   +G +    G    +  + +       R     G   +P+V LI+F+ G ++A
Sbjct: 136 AAYSQFGFIGELTRALGSALLNPRQVR--WGDTFRVAEAAGFQALPIVSLIAFLLGVILA 193

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A  + QFG EIF  +L+++   RE+G L+ A+++AGRSG+A  AEIG+MK+NEE++A
Sbjct: 194 FQSAIAMRQFGGEIFVANLVAVSLFRELGPLMMAILLAGRSGAAFAAEIGTMKVNEEVNA 253

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TMGLD VR L+ P++ A I+  PLL + AN   ++GA++V+  +  IP+  FF++   
Sbjct: 254 LKTMGLDPVRFLVLPKVLAGILVAPLLALYANMIGLLGAAVVMQGFG-IPWTAFFNQVTV 312

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +L+++F+GL KA      I  V    G      + ++G   T+ VV SI ++++ D L
Sbjct: 313 ALSLSDLFSGLFKAVIFGLLIAGVGCLRGLQTASGAAAVGISTTSAVVTSIILIVVFDGL 372

Query: 364 FAIFYFAIGI 373
           FA+ ++ +G+
Sbjct: 373 FAVLFYHMGV 382


>gi|33594879|ref|NP_882522.1| putative integral membrane protein [Bordetella parapertussis 12822]
 gi|33564955|emb|CAE39902.1| putative integral membrane protein [Bordetella parapertussis]
          Length = 378

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W    ++   +        +        DL  +  +DTIGA L+     +   
Sbjct: 23  VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +    S    ++F  +     + +    P   +           IG  +     +  +
Sbjct: 83  --ERVRWSDGQREVFQTLQRNRGEALPAPAPADRW------GWLRAIGDAVFDAGRNGRA 134

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G ++ + G F       +G    +  Q+Y  G   + +  L+ F+ G V++   A
Sbjct: 135 LIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSA 192

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  M
Sbjct: 193 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVM 252

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+   + LI PR+ AL I++PLL +  +  A++G  +       +    F +      +L
Sbjct: 253 GISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAISL 312

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N + G+ K       I +VA   G  +  ++ SLG+  TT VV SI+ VI++D+L+A+ 
Sbjct: 313 TNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAVI 372

Query: 368 YFAIGI 373
           + +IGI
Sbjct: 373 FSSIGI 378


>gi|33599154|ref|NP_886714.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
 gi|33575200|emb|CAE30663.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
          Length = 378

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W    ++   +        +        DL  +  +DTIGA L+     +   
Sbjct: 23  VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +    S    ++F  +     + +    P   +           IG  +     +  +
Sbjct: 83  --ERVRWSDGQREVFQTLQRNRGEALPAPAPADRW------GWLRAIGDAVFDAGRNGRA 134

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G ++ + G F       +G    +  Q+Y  G   + +  L+ F+ G V++   A
Sbjct: 135 LIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSA 192

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  M
Sbjct: 193 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVM 252

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+   + LI PR+ AL I++PLL +  +  A++G  +       +    F +      +L
Sbjct: 253 GISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAISL 312

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N + G+ K       I +VA   G  +  ++ SLG+  TT VV SI+ VI++D+L+A+ 
Sbjct: 313 TNYWIGMFKGVSFGVLIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAVI 372

Query: 368 YFAIGI 373
           + +IGI
Sbjct: 373 FSSIGI 378


>gi|301057238|ref|ZP_07198367.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300448689|gb|EFK12325.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 352

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 107/360 (29%), Positives = 183/360 (50%), Gaps = 12/360 (3%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQ 72
            S     +  ++     ++   D   VDL  +T +D  G  +++   +   K HG   L+
Sbjct: 2   DSNNAGSLIQELSQHFAENPPGD-LTVDLENVTYLDDFGTLVLVELRKLAAKEHGAFNLE 60

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
                I ++   ++F       +   + SF     + +   +G+K    I D       +
Sbjct: 61  NTGKKIREMLMFLNF------DSLFQKVSFEKKRRQGIFVRLGEKTFDIILDLKYAISFI 114

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +  + G   A     +      +  M   GV G+P+V LISF+ G ++A   + QL Q
Sbjct: 115 GAITLSLGYHLAHPRALRK--DDTLDYMQKTGVDGLPIVALISFLMGLIMAFMSSVQLEQ 172

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA I+   L+S+   RE+G ++TA+++AGRSGSA  AEIG+MKI+EE+DA+ TMG D V
Sbjct: 173 FGANIYVASLVSLAMTRELGPIMTAIIVAGRSGSAFAAEIGTMKISEEVDALYTMGFDPV 232

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ P++ A +I +P+LT+ ++  AI G  +V     D+    + ++  +T  L ++F 
Sbjct: 233 GFLVIPKLIAALIMVPILTLFSDIFAIAGGLLVGVFMLDLTVGAYVAQTINTLALFDVFW 292

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G++K+   A  I  V    GF V   + S+G+  T+ VV SI ++I+ DS+F++     G
Sbjct: 293 GVLKSGVFALLITWVGCLRGFQVSGGAASVGQATTSAVVSSIFLIILFDSVFSVVLRYTG 352


>gi|296388302|ref|ZP_06877777.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
          Length = 343

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 177/340 (52%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           +S  + +A  DLS +  +DT GA L+   +         +       +  +L+       
Sbjct: 5   RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPGLPRERQALLKTVGHAL 64

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
               +P++     +   L   IG  +  F     +    +GL +            ++  
Sbjct: 65  HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWRV- 123

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
              L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  
Sbjct: 124 -TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT 
Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EG
Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342


>gi|313108528|ref|ZP_07794529.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|310881031|gb|EFQ39625.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 343

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 2/340 (0%)

Query: 33  KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           +S  + +A  DLS +  +DT GA L+   +         +   +   +  +L+       
Sbjct: 5   RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPSLPRERQALLKTVGHAL 64

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
               +P++     +   L   IG  +  F     +    +GL +            ++  
Sbjct: 65  HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWRV- 123

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
              L+  +   G+  VP++ L++F+ GAVIA  GA  L+ FGA I++++L+    LRE  
Sbjct: 124 -TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
           VLLTA+++AGR+ SA  A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT 
Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     I+G   V     DIP A+F S       + +   G+ KAP  A  I ++   EG
Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           F V   + S+G+  TT VV SI +VI++D+L A+F+  +G
Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342


>gi|54294946|ref|YP_127361.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens]
 gi|53754778|emb|CAH16265.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens]
          Length = 374

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 109/374 (29%), Positives = 183/374 (48%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E     ++  G+W    +  +    +        S    ++   I+  D+ GA  +    
Sbjct: 11  EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +I+L   S   +Q+  LI                      + + Y IGK+  
Sbjct: 69  DELKKRNNQIELVNFSDSQQQMLELIESKQEILSYQLPAVSK------EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F S
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|154149262|ref|YP_001406165.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381]
 gi|153805271|gb|ABS52278.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381]
          Length = 367

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 114/371 (30%), Positives = 177/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQ-SDSAIVDLSAITEIDTIGAELIMYFM 62
           NGI    F GN+      +IA +    +  SI+ S+  I++   +   D   A  I   +
Sbjct: 8   NGILNIFFNGNFDYKLNPKIAHNFKNIVKNSIKNSEKIILNFKDVENFDYFFAVFIKKSL 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            K +   ++   +  I+++F  +      +  ++K       N        IG   +   
Sbjct: 68  IKAN--YEIINENEKIKKIFKTLENADFSENIHKKN-----INFIIKTLNEIGIATIDAK 120

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            +  +    +G              +    L  +       G+  V +V L +F+ G V+
Sbjct: 121 KNLTNLTSFMGEFFIKFFALTPKKMR----LKEMSNCAKDAGIDAVFIVSLTAFLVGIVL 176

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  G+  L+QFGA I+ ID+M +L LREI  L+ A++IAGRS S+  A+IG MKI EEID
Sbjct: 177 AYIGSDMLAQFGASIYIIDIMGMLTLREIAPLIAAIVIAGRSASSFTAQIGVMKITEEID 236

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++TMG D    L  PRI A+II  P +  LA+  +I    IV   Y +I FA +  RF 
Sbjct: 237 AMKTMGFDPFYFLCMPRILAMIIITPFVIFLADAVSIFSQMIVCDAYLEISFADYLERFK 296

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ST  + +   G++KAPF    I IV    GF V   + S+G+  T  VV +I  VI +D+
Sbjct: 297 STIEIRHFLVGIVKAPFFGAIIAIVGCLRGFEVKNDTQSIGEYTTISVVNAIFWVIALDA 356

Query: 363 LFAIFYFAIGI 373
            FA+ +  + I
Sbjct: 357 FFAVMFSELKI 367


>gi|71906845|ref|YP_284432.1| hypothetical protein Daro_1206 [Dechloromonas aromatica RCB]
 gi|71846466|gb|AAZ45962.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB]
          Length = 368

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 165/365 (45%), Gaps = 13/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G W   E+  +   +   +           DLSA+T +D+  A L+          
Sbjct: 14  VVLSGAWTLAEMLPMLSFLQAELTNQSHHTR-HWDLSAVTRLDSAAAVLLWRTWGGQWPA 72

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                V      +   ++   R+  +   P+         +L   IG  + K + +    
Sbjct: 73  SL--DVDEMHRAVLVRVAELPREMPEQVLPR--------VHLPEFIGVLLFKALANVRGM 122

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             + G ++ +                     +Y  G   +PV  L+ F+ G  I+   A 
Sbjct: 123 VALFGQLLLDCAYLFRHPKDVP--WREFTSNVYKAGALALPVTALVGFLIGVTISYLSAL 180

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA++F ++++ I  +RE+G +L AV++AGRSGSA+ A+IG M++ EEIDA+ TMG
Sbjct: 181 QLKSFGADLFIVNILGISIIRELGPVLVAVLVAGRSGSAMTAQIGVMRVTEEIDALSTMG 240

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     ++ P+++ L +++PLL +  +  A+ G  +      D+    F         +A
Sbjct: 241 ISRSIRVVLPKVFGLTVAMPLLVLWTSAVALFGGMLAALMQLDLSLIYFLENLPRAVPVA 300

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+F GL K         +VA   G  V  ++ SL    T+ VV +I+ VI++D++FAIF 
Sbjct: 301 NLFIGLGKGLVFGFVTAVVACHFGLHVKPNTESLSANTTSAVVTAITSVILVDAIFAIFT 360

Query: 369 FAIGI 373
             IG+
Sbjct: 361 RQIGV 365


>gi|307610778|emb|CBX00391.1| hypothetical protein LPW_21111 [Legionella pneumophila 130b]
          Length = 374

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 109/374 (29%), Positives = 183/374 (48%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E     ++  G+W    +  +    +        S    ++   I+  D+ GA  +    
Sbjct: 11  EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +I+L   S   +Q+  LI                      + + Y IGK+  
Sbjct: 69  DELKKRNNQIELVNFSDSQQQMLELIESKQDILSYQLPAVSK------EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F S
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|302382565|ref|YP_003818388.1| hypothetical protein Bresu_1453 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193193|gb|ADL00765.1| protein of unknown function DUF140 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 372

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 106/373 (28%), Positives = 185/373 (49%), Gaps = 12/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G +V R  G+W +  +   A  +   ++         VDLS +   DT GA  ++  
Sbjct: 11  ATGGGSVLRLTGDWTTMSLGRTAARLSDGLSGRTIQ---SVDLSGLGRFDTAGALALVQA 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                             +++ ++    RK +   +        S   +   +G  +   
Sbjct: 68  SG-LTLPKDAWQSRPEAGRIYDMVETLERKSMPAPR-----RQASLTRIFARMGHGVHDA 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +       LG +++ TG         +    + + Q    G+  +P++ + +F  GAV
Sbjct: 122 AAEFLLSMAFLGRLMAATGNAVRHPGAIR--WPAWVSQAERSGLDAMPIIAVTNFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IA  GA  L+QFGA +F++DL+ +  LRE+ VL+TA+++AGRS S+  AE+GSM++N+E+
Sbjct: 180 IAFLGADLLTQFGAGVFAVDLIGVSILRELAVLITAILLAGRSASSFAAEVGSMRMNQEV 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+D  + L+ PR+ A+++ +PLLT +   + + G  IV W    +  A F  R 
Sbjct: 240 DAMQVMGVDPFQALVIPRLAAMLVMVPLLTFVGMIAGLFGGLIVTWSQLALGPAFFLQRM 299

Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             T     ++  GL KAP  A  I  +  ++G AV     SLG++VT  VVQ+I  +I +
Sbjct: 300 VDTPDMFTHMLVGLSKAPVFAIVIAAIGCRQGLAVSGDVESLGRRVTAAVVQAIFAIIFL 359

Query: 361 DSLFAIFYFAIGI 373
           D++FA+ Y  + I
Sbjct: 360 DAVFALIYLELDI 372


>gi|148359621|ref|YP_001250828.1| ABC transporter permease [Legionella pneumophila str. Corby]
 gi|296107663|ref|YP_003619364.1| putative ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281394|gb|ABQ55482.1| ABC transporter, permease [Legionella pneumophila str. Corby]
 gi|295649565|gb|ADG25412.1| putative ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 374

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 107/374 (28%), Positives = 183/374 (48%), Gaps = 13/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           E     ++  G+W    +  +    +        S    ++   I+  D+ GA  +    
Sbjct: 11  EQKNATYQCCGSWSVLTLEGLPKKFI--TGPLPDSQQITINGEKISVFDSAGALALKKCI 68

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
             ++K + +++L   S   +Q+  LI                      + + Y IGK+  
Sbjct: 69  DELKKRNNQVELVNFSDSQQQMLELIESKQDILSYQLPIVSK------EGVLYQIGKESE 122

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++       ++G + +   E  A   +F   L S++  +   G+  +P++ L+SF+ G
Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   QL  +GA IF   L  +   RE G L+TA+++AGR+ S+  A+IGSMKINE
Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DAI TMGL    +L+ P++  L+I  PLL   A+  +I GA I+     +I F  F +
Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R   +  L  +  GL KAP  +  I +V   +GF V   ++S+G + T  VVQ++ ++II
Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360

Query: 360 IDSLFAIFYFAIGI 373
            D+ F+I Y  +G+
Sbjct: 361 ADAAFSIAYSWMGL 374


>gi|33591357|ref|NP_879001.1| putative integral membrane protein [Bordetella pertussis Tohama I]
 gi|33570999|emb|CAE40477.1| putative integral membrane protein [Bordetella pertussis Tohama I]
          Length = 376

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W    ++   +        +        DL  +  +DTIGA L+     +   
Sbjct: 21  VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 80

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +    S    ++F  +     + +    P   +           IG  +     +  +
Sbjct: 81  --ERVRWSDGQREVFQTLQRNRGEALPAPAPADRW------GWLRAIGDAVFDAGRNGRA 132

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G ++ + G F       +G    +  Q+Y  G   + +  L+ F+ G V++   A
Sbjct: 133 LVIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSA 190

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  M
Sbjct: 191 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVM 250

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+   + LI PR+ AL I++PLL +  +  A++G  +       +    F +      +L
Sbjct: 251 GISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAISL 310

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N + G+ K       I +VA   G  +  ++ SLG+  TT VV SI+ VI++D+L+A+ 
Sbjct: 311 TNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAVI 370

Query: 368 YFAIGI 373
           + +IGI
Sbjct: 371 FSSIGI 376


>gi|319761111|ref|YP_004125048.1| hypothetical protein Alide_0383 [Alicycliphilus denitrificans BC]
 gi|317115672|gb|ADU98160.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
          Length = 388

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%)

Query: 3   ENGITVFRF--AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++G    R    G+W +   ++      +A             L  +  +D +GA+++  
Sbjct: 27  QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 86

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +         +S    ++   ++                      +    +G  +++
Sbjct: 87  HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 137

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +        ++G ++ +      +  +       +   +Y +G   + +  L+ F+ G 
Sbjct: 138 ALGHLADMVELVGQLLLDLLRLVRNPARAP--WRDISGHVYQMGAKALHITALVGFLIGV 195

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A   + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 196 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 255

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     L+ PR  AL +++PL+ +    +A+ G  +       I  A F   
Sbjct: 256 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 315

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +   ++N++  + K+      I ++    G  V  ++ SLG+  T  VV +I++VI++
Sbjct: 316 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 375

Query: 361 DSLFAIFYFAIG 372
           D+LFA+ +  +G
Sbjct: 376 DALFAVAFKNLG 387


>gi|157165030|ref|YP_001466748.1| MTA/SAH nucleosidase [Campylobacter concisus 13826]
 gi|112799982|gb|EAT97326.1| ABC transport system permease [Campylobacter concisus 13826]
          Length = 368

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 174/370 (47%), Gaps = 14/370 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           NG    +FAG +   +   +               +   D S +  ID     +++    
Sbjct: 13  NGTATIKFAGEFSYKDAKNLQSIFKKIQKLK---GNVKFDFSELKSIDYA---VLILLKN 66

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
             +GK      +    +  S +    +   K   P  S       N    +G+KI +   
Sbjct: 67  TLNGKKFEIITNDEKIKAMSDLLNDEKIDFKYMPPHNS------LNFFSRLGEKICEGFV 120

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +       LG  +  +     +    +         +   GV+ V +V L +F+ G V+A
Sbjct: 121 NLLEFGSFLGEFLIKSVRILFNPANLR--FREFSNYIKDGGVNAVFIVSLTAFLIGVVLA 178

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G+  L+ FGA IF +++M +L LRE+  L+ A+++AGRS S+  A+IG+MK+ EEIDA
Sbjct: 179 YLGSAMLASFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTEEIDA 238

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TMG +    L+ PRI A+++ +P++  +A+  +I+G  I+     DI F+ + +RF  
Sbjct: 239 MKTMGFEPFNFLVLPRIIAMVLCVPVIIFIADSISILGQMIICQTILDISFSDYLNRFRE 298

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L +   G+IKAPF    I I+    GF V  ++ SLG   T  VV +I  VI +D+ 
Sbjct: 299 MVELRHFAVGMIKAPFFGAVIAIIGCMRGFGVSQNAQSLGAMTTVSVVNAIFWVIALDAF 358

Query: 364 FAIFYFAIGI 373
           FAI +  + I
Sbjct: 359 FAIIFMWLKI 368


>gi|294054794|ref|YP_003548452.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614127|gb|ADE54282.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 366

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 173/369 (46%), Gaps = 9/369 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEK 64
               R  G+W        + ++  A++    S  +   D   + E DT     I    + 
Sbjct: 6   GLCVRIYGDWLLGNTRPGSQELESALSVVTTSEQAIRFDAGDLGEWDTGLLIFIRRCYDL 65

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              +      S   E   ++++ +         P+ +       +    +G++ +     
Sbjct: 66  AQERGLEVDFSGLPEGAQNMMALSLAV------PEPAKADGRKVSWLSRVGERSLAVGGG 119

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S     G  + +   F     + +             GV  +P+V+L++ +TG +IA 
Sbjct: 120 VRSYCDFFGQFLLDLLAFVTGRGQVRR--RDFFLLCQETGVQALPIVMLLNCLTGLIIAF 177

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            G  QL +F A+IF  DL+ +   RE+G ++T V++AGR+G+A  A+IGSM++NEE+DA+
Sbjct: 178 IGVIQLQKFAADIFVADLVGLATARELGAVITGVIMAGRTGAAFAAQIGSMQVNEEVDAL 237

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T G+  ++ L+ PR+ AL++ +PLL ++A+   I+G  I+     D+    +F++ H  
Sbjct: 238 TTFGISPMQFLVVPRVVALVLMMPLLGVVADIVGILGGLIIAVSISDVSVIQYFNQVHQA 297

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L + F G+ K       IGI     G   G  ++S+G   T+ VV SI+ +++ D++F
Sbjct: 298 VGLNDFFIGIFKCAVFGLIIGIAGCYRGLNCGRDASSVGLATTSAVVTSITWLVVADAIF 357

Query: 365 AIFYFAIGI 373
           A+    +GI
Sbjct: 358 AVLCHLLGI 366


>gi|254417869|ref|ZP_05031593.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
 gi|196184046|gb|EDX79022.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
          Length = 372

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 100/373 (26%), Positives = 186/373 (49%), Gaps = 12/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G    R  G+W +  +  +   +   ++         VD   +   DT GA  ++  
Sbjct: 11  AGDGTAKLRLVGDWTTTALGRLPQRLGKDLDGR---KIESVDTRDLGRFDTAGALALVQA 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                             +++++I    RK     K        +F +    IG+ +  F
Sbjct: 68  SH-CGVPKSAWTERPEAGRIYTMIEALERKSSPPPKQ-----PGAFTSAFAKIGRGVYDF 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             ++      LG ++    E   +    +    + + Q    G+  +P+V++ +F  GAV
Sbjct: 122 GAEAMLSLAFLGRLMEAVVEAAKNPGGIR--WPAWVSQAERAGLDAIPIVMVTNFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G   L+ FGA++F++ L+ +   RE  V++ +V++AGRS SA  AEIGSM++N+E+
Sbjct: 180 VAFIGVDLLTDFGAQVFAVQLIGVAMFREFAVVIASVLLAGRSASAFAAEIGSMRMNQEV 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG++  + L+ PR+ AL++ LPLLT +     ++G  IV W   ++  A FF R 
Sbjct: 240 DAMQVMGVNPFQALVVPRLAALVLMLPLLTFMGMIGGLLGGLIVCWSSLNLGPAFFFQRL 299

Query: 302 HSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
               ++  ++  GL+KAP  A  I  +  ++G +V     SLG++VT  VVQ+I  +I++
Sbjct: 300 VEDGSMAQHMMVGLVKAPVFALVIAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359

Query: 361 DSLFAIFYFAIGI 373
           D++FA+ +  + I
Sbjct: 360 DAVFALMFLELDI 372


>gi|317153918|ref|YP_004121966.1| hypothetical protein Daes_2214 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944169|gb|ADU63220.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 431

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 14/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++  G   F   G   +P  + + D+    +  +    +   D S I  +D  G  L++ 
Sbjct: 67  VTGAGQLRFEIRGRLDAPGTAHVWDEASR-VASAGSGGAVEADCSGIEYMDGSGMALLLK 125

Query: 61  FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
             E   +  G + L  ++    QL  L             P  +   +  + L   +G+ 
Sbjct: 126 LREVVAEAGGTLSLVNLAPRHRQLIDLTG-------DRPLPGWNPADSERRGLAERVGRA 178

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
               +         +G              + +     ++    +VGV  + ++ L+ F+
Sbjct: 179 TRDALTGIREMVEFVGEASVIITRSLLHPSRVR--WKDVLLSCVHVGVDSLFIISLLGFL 236

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G +++ Q A  L +FG EIF  +++ ++  RE+G L+TA+++A RSGSA  AEIG+MKI
Sbjct: 237 MGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTAILLAARSGSAFAAEIGTMKI 296

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEE+DA+ TMGL  +R L+ P++ + +  +PL+T+  N ++++G ++V+      P   F
Sbjct: 297 NEELDALTTMGLSPMRFLVVPKLLSALAMVPLMTLFFNLASLVGGALVM-LSLGFPLVTF 355

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            SR  S    ++ F G+ KA   +  +  V    G      ++++G   T+ VV  I  +
Sbjct: 356 TSRVFSYVHYSDFFGGMAKALVFSILVAGVGCLRGMQTRSGASAVGLSTTSAVVTGIIFI 415

Query: 358 IIIDSLFAIFYFAIGI 373
              D LFA+ ++ + I
Sbjct: 416 AFADGLFAVAFYYLKI 431


>gi|121592684|ref|YP_984580.1| hypothetical protein Ajs_0250 [Acidovorax sp. JS42]
 gi|120604764|gb|ABM40504.1| protein of unknown function DUF140 [Acidovorax sp. JS42]
          Length = 372

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 168/361 (46%), Gaps = 11/361 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
            G+W +   ++      +A             L  +  +D +GA+++     +       
Sbjct: 22  QGDWVAAAFADRRAWRRVAAQLKECGPGVAWSLQGVQRLDHVGAQILWNHWGRAW----- 76

Query: 72  QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131
                   +L         +  +   P          +    +G  ++  ++       +
Sbjct: 77  ----PEQLELTENQREMLERVAQYTTPCEPPAPWRLGDQVDRLGVMVLHALDHVRHLVIL 132

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G ++ +      +    +G    +   +Y +G + +P+  L+ F+ G V+A   + QL 
Sbjct: 133 VGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVVLAYLMSLQLR 190

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG+  
Sbjct: 191 QFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPH 250

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
              L+ PR  AL +++PL+ +    +A+ G  +       I  A F     +   ++N++
Sbjct: 251 GFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQALPAAVNVSNLW 310

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D+LFA+ +  +
Sbjct: 311 LAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVDALFAVAFKNV 370

Query: 372 G 372
           G
Sbjct: 371 G 371


>gi|254450464|ref|ZP_05063901.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus
           238]
 gi|198264870|gb|EDY89140.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus
           238]
          Length = 376

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 8/371 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +        G    P +++I               +    LS +T  DT  A  I   
Sbjct: 13  STDAAVTMTLRGAMTLPYVTQIVAKFDTL----PMDRTVRAYLSGVTRFDTSAAWAIASL 68

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +     +   +        SL+                            IG  +V  
Sbjct: 69  RTRLETAGQHLEIRGAGIGHESLLKSVTDAMPVITPA--PVVAGGLIEWVAAIGSSMVDA 126

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +          GL +S          +F+  L +L+     VG   VP+V L++F+ G V
Sbjct: 127 VTFVLELIGYFGLFLSRLLRAIRHPKEFR--LTALVHHCQEVGFKAVPIVALMAFLIGVV 184

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A QG+ QL QFGAE+F +DL+++  LRE+G+LLT++++AGR+ SA  A IGSMK+ EEI
Sbjct: 185 LAFQGSTQLKQFGAEVFIVDLIAVSILRELGILLTSIIVAGRTASAFTAAIGSMKMREEI 244

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R++GLD    L  PRI AL++ LP+L ++AN   + G +I+ W    I   +F +R 
Sbjct: 245 DAMRSLGLDPAATLFVPRILALVLMLPILGLIANVMGLFGGAIMAWIDLGISPEMFMTRL 304

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +   ++++  G+IKAP  A  IG+V    G  V  ++ SLG+  ++ VV +I  VI+ D
Sbjct: 305 VNGTDVSHLAAGMIKAPVFALIIGVVGCHAGMQVQSNAESLGRMTSSSVVAAIFAVIMAD 364

Query: 362 SLFAIFYFAIG 372
           ++F+IF+  IG
Sbjct: 365 AVFSIFFAQIG 375


>gi|315639122|ref|ZP_07894289.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter upsaliensis JV21]
 gi|315480826|gb|EFU71463.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Campylobacter upsaliensis JV21]
          Length = 368

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 10/338 (2%)

Query: 39  SAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
             I+D   +  ID  G    +     ++K     +   +S   + LF L    +++ +K 
Sbjct: 38  QCILDFHHLEFIDMAGVRFFLALEYELQKRGIVSQRVHLSEKFDALFELCEKNYQRILKE 97

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
            K            L  ++G   +  +         +G   +   ++      F+   ++
Sbjct: 98  PKKHFDT-----AELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQYFKKPKAFR--FIA 150

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
            +  +    +  +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I   RE+  L+
Sbjct: 151 FLYHIENSALKALPIVILTALLVGVVLAYQAAFQLAQFGANIFIVDLVGISATRELAPLI 210

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            A++IAGRS S+  A+IG MKI +EI A+ TMG      +I PR+ AL++++PL+  +++
Sbjct: 211 AAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVIALVVAMPLIVAVSD 270

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           F +I G  +V     DI F  F  RF     L ++  GLIKAP     IG++A   G  V
Sbjct: 271 FVSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEV 330

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
              + S+G   T  VV +I  VI  D+LF++    +GI
Sbjct: 331 KHTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 368


>gi|221199880|ref|ZP_03572923.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
 gi|221207452|ref|ZP_03580461.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221172655|gb|EEE05093.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221180119|gb|EEE12523.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
          Length = 446

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     VV           +  DLS I  +D +G + +     +   
Sbjct: 91  TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALWRVWGRKLP 150

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R         L    G  +  F      
Sbjct: 151 PGIALTATQ-----RTIFERIERLDSQREAPERVVRVGPITRL----GLMLFAFAEHLHG 201

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 440 FQNVGL 445


>gi|30248137|ref|NP_840207.1| ABC transporter permease [Nitrosomonas europaea ATCC 19718]
 gi|30180022|emb|CAD84017.1| possible ABC transport permease [Nitrosomonas europaea ATCC 19718]
          Length = 386

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 85/375 (22%), Positives = 178/375 (47%), Gaps = 15/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDV---VMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
           +  G T+ +  G++    +      V   +  +     + S   DL+ ++++D  GA ++
Sbjct: 20  TAAGDTLLQLTGSFTLTSLDRSFPTVTKELAKLASQSDASSLHWDLTDVSQLDYAGAVML 79

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                +      L  +    E++F  +  +     + +                 +GK++
Sbjct: 80  WRIWGEQRPAHLL--LRPEQERMFLRLEKSVSLPEQPR--------RILFLPISMLGKQL 129

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           ++F++       + G ++ +         +       +   +Y  G   + +  ++ F+ 
Sbjct: 130 LRFLDHLTGMITLSGQIVLDLFFLMTHPGRIPA--REISANLYRTGAQALGITAVVGFLI 187

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++   + QL  FGA+I+ ++++ +  +RE+G +L A+++AGRSGSA+ A++G M++ 
Sbjct: 188 GIVLSYLTSEQLHMFGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVT 247

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+  MG+     L+ P+I  L I+LPL+ +  +  A++G  +       +      
Sbjct: 248 EELDALTVMGIPHSMRLVLPKIIGLGIALPLIVLWTSAIALLGGLVAAELQIGLSIHYAL 307

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +    T  +AN++ GL K       I ++A   G  +  ++ SLG+  T  VV SI+ VI
Sbjct: 308 TALPDTVPIANLWLGLGKGMVCGMTIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVI 367

Query: 359 IIDSLFAIFYFAIGI 373
           +ID++FA+ +  IGI
Sbjct: 368 LIDAIFAVAFSNIGI 382


>gi|124386096|ref|YP_001027344.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|124294116|gb|ABN03385.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
          Length = 428

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++    +V   I +  +      DLS +  +D +G + +     + 
Sbjct: 71  GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 130

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                          L        ++  +    + S       +     G+ +  F    
Sbjct: 131 ---------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 181

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG +I +                 +   +Y  G   +P+  L++F+ G V++  
Sbjct: 182 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 239

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 240 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 299

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S  
Sbjct: 300 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 359

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 360 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 419

Query: 366 IFYFAIGI 373
           I +  +G+
Sbjct: 420 ILFQNVGL 427


>gi|307635079|gb|ADI85448.2| ABC transporter, membrane protein of unknown function DUF140
           [Geobacter sulfurreducens KN400]
          Length = 380

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 164/375 (43%), Gaps = 14/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60
           S +G    R  G+W +  +      V   +  +  S   + +   +   D+     ++  
Sbjct: 17  SADGTLSLRLEGDWLAGSLPLPPGAVEDELAVAPASR-LLFETGDLGRWDSGLITFLIRV 75

Query: 61  --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                          +     +L +L +    + + +   +          L   I  ++
Sbjct: 76  QALCAGQGMAFDGGNLPEGARRLLALATAVPEQTLTHGGSRPP--------LLERIADRV 127

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +         +  LG V    G   A   +F+     L+  M   G   +P+V LISF+ 
Sbjct: 128 IGMWKSMVEMSAFLGEVTVACGRLLAGRARFRR--SELLAIMQECGAQALPIVSLISFLV 185

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  GA QLS FGA+I+   L+ I  +R +G ++T +++AGR+G+A  A +G+M++N
Sbjct: 186 GLILAFVGAVQLSMFGAQIYVASLVGIGIVRIMGAIMTGIIMAGRTGAAFAARLGTMQVN 245

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ T+G+  V  L+ PR+ AL++ +PLL + A+   I+G   V     D+    + 
Sbjct: 246 EEIDALATLGISPVEFLVIPRVAALVLMMPLLCLYADLMGILGGLAVGVLMLDLNVTEYI 305

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +       L + + GL  +      + +     G   G  ++S+G   T+ VV  I  ++
Sbjct: 306 TMTKKAVRLKDFWVGLFHSGVFGVLVALAGCLRGIQCGRSASSVGDAATSAVVTGIVSIV 365

Query: 359 IIDSLFAIFYFAIGI 373
           +  ++  +    +GI
Sbjct: 366 VATAVITVICNILGI 380


>gi|224371971|ref|YP_002606137.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223694690|gb|ACN17973.1| ABC-type transporter, permease protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 373

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 178/372 (47%), Gaps = 15/372 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY----F 61
            T    +G+     +S++ +    A+     +   ++DL  +  +D+ GA L+ +    +
Sbjct: 13  GTTVTLSGSLDIAGVSKVWEKAEKAL---FGTGDLVIDLKRVDHMDSAGAALVWFIKTTW 69

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++  GKI + G+    +Q+  L       +                +     GK     
Sbjct: 70  KQRTGGKISVLGLKPAFKQVMDLTETIPDTRD-----GEKKPKKKPPSFVETRGKNFADQ 124

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +  + S   ++G +              +      +      GV+ +P+V LISF+ G V
Sbjct: 125 MEKATSFIALVGQITRALIHAFFHPLSVR--WKDALLTAERSGVNALPIVALISFIVGLV 182

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q A  +  FGAEI+  +L+ I  +RE+G L+TA+++AGRSGSA  AEIG+MKINEEI
Sbjct: 183 MAFQAAMPMKMFGAEIYVANLIGIAMVRELGPLMTAIILAGRSGSAFAAEIGTMKINEEI 242

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ TMGLD VR L+ PRI A +   PLLTI +NF  I+G SIV       P   ++S+ 
Sbjct: 243 DALSTMGLDPVRFLMVPRILAAVFITPLLTIFSNFVGIMGGSIV-LLSMGYPAITYYSQV 301

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S  T  +   GL+K       I       G        ++G   T+ VV  I+++ + D
Sbjct: 302 ISFVTWIDFTGGLVKCFVFGILISAAGCIRGIETQSGPGAVGASTTSAVVTGITLIAVFD 361

Query: 362 SLFAIFYFAIGI 373
            +F++ ++ +GI
Sbjct: 362 GIFSVLFYCLGI 373


>gi|53802513|ref|YP_112711.1| ABC transporter permease [Methylococcus capsulatus str. Bath]
 gi|53756274|gb|AAU90565.1| putative ABC transporter, permease protein [Methylococcus
           capsulatus str. Bath]
          Length = 406

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 172/371 (46%), Gaps = 13/371 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+G  V    G+W    +   + D+   + ++ +      DL  +  +D+ GA ++    
Sbjct: 48  EDGTAVVH--GHWNLRGLIAASPDLRERLCRAARRPDLEWDLRGVNVLDSAGAFVLWQAW 105

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +                L        R+      P           +   I   I    
Sbjct: 106 GER---------LPERIALRHEQQSAFRRWQTGGIPAVRDGRRPPVPIRRRIIAAIAGLG 156

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   +LG +I +                 +   ++  G   + +  L+ F+ G V+
Sbjct: 157 SHLLAVLALLGQLILDLAHLARHPADIP--WREISATIHETGGRALGITALVGFLIGVVV 214

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   + QL  FGA+++ ++++ +  +RE+G LL A+++AGRSGS++ A IG M++ +E+D
Sbjct: 215 SYLSSLQLKTFGAQVYIVNILGMSIIRELGPLLAAILVAGRSGSSMTARIGVMRVTQELD 274

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  MG+     LI P++ AL+++LPLL +  +  A+ G ++      +I +  FF +  
Sbjct: 275 ALAAMGISQSLRLILPKVVALVVALPLLVVWTDVVALAGGAVSAHLELEIGYHQFFQKLP 334

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S   +AN   GL KA      + ++A   G  +  ++ SLG + T  VV SI++VI++D+
Sbjct: 335 SAVPVANFAIGLGKAAVFGLFVALIACHYGLRIAPNTESLGNETTNSVVVSITLVILVDA 394

Query: 363 LFAIFYFAIGI 373
           +FAI + ++GI
Sbjct: 395 VFAILFRSVGI 405


>gi|301060039|ref|ZP_07200913.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300445918|gb|EFK09809.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 376

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 94/376 (25%), Positives = 175/376 (46%), Gaps = 12/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL--- 57
           ++E+        GNW+       +  ++  +++         D + +   D+        
Sbjct: 10  LTESETLTVHLQGNWQMESGVPSSGALLDQLDQHSSIKRIEFDATELGSWDSSLPIFFFE 69

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           I     +   K++  G+   + QL  L +          K + +    S      H+G +
Sbjct: 70  ISKLAVEKKTKVQKDGLPAGVRQLIDLATAV-------PKKEDARQTVSRAGFFGHVGSE 122

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           ++ F   +      +G              +F+   L +  Q    G   VP+V LISF+
Sbjct: 123 VIDFTKSAGELITFIGAAFEAFVRMITGRARFRATDLGIFLQ--EAGAQAVPIVSLISFL 180

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  G  QLS FGA+++  DL+ I  +RE+G ++T +++AGR+G+A  A++G+M++
Sbjct: 181 VGLILAFVGILQLSMFGAQVYVADLVGIAMVREMGAIMTGIIMAGRTGAAYAAQLGTMQV 240

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+ T+ +  +  L+ PR+ AL + +PLL + A+   I+G ++V    Y I   V+
Sbjct: 241 NEEIDALETLAIPPMEFLVLPRMVALAVMMPLLVLYADLMGILGGALVAVGMYKIDIIVY 300

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            SR  S  TL+++F GL         + +     G   G  ++++G   T+ VV  I  +
Sbjct: 301 LSRTKSAVTLSDLFIGLFMGAVFGVLVALSGCLRGIQCGRSASAVGDATTSAVVTGIVAI 360

Query: 358 IIIDSLFAIFYFAIGI 373
           II  ++  +    +GI
Sbjct: 361 IIATAVITVLCSILGI 376


>gi|315498539|ref|YP_004087343.1| hypothetical protein Astex_1526 [Asticcacaulis excentricus CB 48]
 gi|315416551|gb|ADU13192.1| protein of unknown function DUF140 [Asticcacaulis excentricus CB
           48]
          Length = 377

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 6/367 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               V    G+W +  + +  + +  A+  +        DL      DT GA  +   + 
Sbjct: 14  GEARVVSLTGDWTAIGLRDAGERLKSALKSASAVRVETDDLKG---FDTAGAYALRTALG 70

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                         +  ++ LI     + ++ QK       +        +G+      N
Sbjct: 71  ALGDDALFSH-DPRLSAVYELIRDIQPQVVEAQKKTAQQKAHPIIAELAQLGRNTEDVFN 129

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D       +G +I        +  + +     L+ QM   G   + VV + +F  GAVIA
Sbjct: 130 DLRDLNVFIGQLIVTAFMSLVTPGRIR--WTPLVAQMQQAGFGALMVVCVTNFFVGAVIA 187

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G  QL QFGA +F+++L+ I  LRE G ++ AV+IAGRS S+  AEIG+MK+N+EI A
Sbjct: 188 FLGILQLQQFGAAVFAVELIGISVLREFGPVIAAVLIAGRSASSFTAEIGAMKMNQEISA 247

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG++    LI PR+ AL++++PL+T   + + ++G  +V+W         F  R   
Sbjct: 248 MRVMGINPFDALIFPRLAALVLTMPLITFAGSMAGLLGGFVVVWAQLGYGPHFFSIRMTE 307

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                N F G+IK P  A AI I+  + G  V     SLG++VT  VVQ+I  +I+ID++
Sbjct: 308 YVPFVNFFVGMIKVPLFAIAITIIGCRLGMNVTEDVISLGRQVTRAVVQAIFTIILIDAI 367

Query: 364 FAIFYFA 370
            A+ +  
Sbjct: 368 VAMMFNG 374


>gi|302342029|ref|YP_003806558.1| hypothetical protein Deba_0592 [Desulfarculus baarsii DSM 2075]
 gi|301638642|gb|ADK83964.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075]
          Length = 380

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 171/364 (46%), Gaps = 7/364 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G       G     ++ E    +   + K +   S ++DLS +  +DT GA  +     
Sbjct: 19  GGDLHVSLRGRLGVNQLPEFQTAIARVL-KELAPRSVLLDLSRLDYLDTSGAMAV-KIWA 76

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
               +     +     +   +++     +++               +   +G+   +   
Sbjct: 77  AAPPQDLAVRLEAGQSRFRDMLALIDVDQVRKPAINPDKRD---AGMLEGMGQSARRMGE 133

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   +G    +     A     +     ++  M  VGV G+P+V LI  + G ++A
Sbjct: 134 QIGQLLAFVGQATKSVLMVVARPATLRM--GDVLAYMQQVGVDGLPIVSLIGLLLGMIMA 191

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              + QL  FGA+++   L+++  +RE+G ++TA+++AGRSGS+  AEIG+MK+NEE+DA
Sbjct: 192 FMSSLQLKSFGADVYVATLVAVAMVRELGPIMTAILVAGRSGSSFAAEIGTMKVNEEVDA 251

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG D V  L  P++ A ++ +PLLT+ +  +AI+G  IV     D+    + +   S
Sbjct: 252 LTVMGYDPVIFLALPKVIAAVLMVPLLTLFSIAAAIMGGLIVGVAGLDLTPYTYLNESIS 311

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +    ++ T + KA      I ++  ++GF V   +  +GK  T+ VV ++ ++I+ DS+
Sbjct: 312 SFDAGDLMTSMFKAAVFGLLIAVIGCQKGFTVEGGAAGVGKATTSAVVAALFLIIVTDSV 371

Query: 364 FAIF 367
           FAI 
Sbjct: 372 FAII 375


>gi|257459529|ref|ZP_05624638.1| ABC transport system permease [Campylobacter gracilis RM3268]
 gi|257442954|gb|EEV18088.1| ABC transport system permease [Campylobacter gracilis RM3268]
          Length = 367

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 114/372 (30%), Positives = 174/372 (46%), Gaps = 14/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S  G       G W           ++         +   + LS I+ +D   A +I   
Sbjct: 10  SSGGKNTLSLRGQW---NYKSSRSQLLALKKAVKNLNELELSLSEISNLDYFMALMIKNA 66

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           +     ++ L   S    ++ S +           + +R        N    IG      
Sbjct: 67  L--AGKRVSLVEDSCKAAKILSFMDDKTIDFSYVPESRR-------LNFLAQIGLYCHLG 117

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I    S A  LG   S    F     KF+      +  +   G+  + +V L +F+ G V
Sbjct: 118 ILGLLSLASFLGEFFSKLAAFIIHPMKFR--FKETVNFIKDSGIDALFIVSLTAFLIGIV 175

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G+  LS+FGA I+ ID+M  L LRE+  L+ A++IAGRS S+  A+IG MKI EEI
Sbjct: 176 LAYIGSDMLSKFGASIYIIDIMGALTLREVAPLIAAIVIAGRSASSFTAQIGVMKITEEI 235

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+RTMG D    L  PRI A+++ +PL+  +A+  +I    IV   Y DI F+ +  RF
Sbjct: 236 DAMRTMGFDPFYFLAMPRIIAMVLIMPLVIFIADSVSIFAQMIVCDAYLDIAFSDYLDRF 295

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++  L +   G+IKAPF    I I+    GF V  ++ S+G+  T  VV +I  VI ID
Sbjct: 296 KASVELRHFLVGMIKAPFFGAFIAIIGCMRGFEVKGNTQSIGEYTTISVVNAIFWVIAID 355

Query: 362 SLFAIFYFAIGI 373
           ++FA+ +  IG+
Sbjct: 356 AVFAVLFSEIGL 367


>gi|330822969|ref|YP_004386272.1| hypothetical protein Alide2_0328 [Alicycliphilus denitrificans
           K601]
 gi|329308341|gb|AEB82756.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 372

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%)

Query: 3   ENGITVFRF--AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++G    R    G+W +   ++      +A             L  +  +D +GA+++  
Sbjct: 11  QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 70

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +         +S    ++   ++                      +    +G  +++
Sbjct: 71  HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 121

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +        ++G ++ +      +  +       +   +Y +G   + +  L+ F+ G 
Sbjct: 122 ALGHLADMVELVGQLLLDLLRLVRNPARAP--WRDISGHVYQMGAKALHITALVGFLIGV 179

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A   + QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE
Sbjct: 180 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 239

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+R MG+     L+ PR  AL +++PL+ +    +A+ G  +       I  A F   
Sbjct: 240 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 299

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +   ++N++  + K+      I ++    G  V  ++ SLG+  T  VV +I++VI++
Sbjct: 300 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 359

Query: 361 DSLFAIFYFAIG 372
           D+LFA+ +  +G
Sbjct: 360 DALFAVAFKNLG 371


>gi|329890329|ref|ZP_08268672.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568]
 gi|328845630|gb|EGF95194.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568]
          Length = 372

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 186/373 (49%), Gaps = 12/373 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S++G T  R AG+W +  +  + D +   ++         +DL  +   DT GA  +   
Sbjct: 11  SQDGQTRLRLAGDWSTVAVGRMGDRLKAELDGRS---VTALDLDDLGRFDTAGALAVAQA 67

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           M +         V     +L+ +++            +              +G+ +  F
Sbjct: 68  MSR-PIPESAWSVRPEAGRLYRMVAKLD-----CMTAEPPRRSAPMTRGFAKVGRGVYDF 121

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             ++      LG +++          + +    +   Q    G+  +P+V++ +F  GAV
Sbjct: 122 GAEAMLSLAFLGRLMAAVLTTLKHPGRIR--WAAWFSQAERTGLDAIPIVVVTNFFIGAV 179

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G   L+QFGA +F++ L+ +   RE  V++TAV++AGRS S+  AEIGSM++ +E+
Sbjct: 180 VAFIGVDLLTQFGAGVFTVQLIGVAVFREFAVVITAVLLAGRSASSFAAEIGSMRMTQEV 239

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ MG+D  + L+ PR+ AL++ LPLLT LA    ++G  +V W   ++  A FF R 
Sbjct: 240 DAMKVMGVDPFQALVIPRLAALLVMLPLLTFLAMVGGLLGGVLVAWSQLNLGPAFFFQRL 299

Query: 302 HST-ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++  GLIKAP  A  +  +  ++G +V     SLG++VT  VVQ+I  +I++
Sbjct: 300 VEDGYMPTHMMVGLIKAPVFALVVAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359

Query: 361 DSLFAIFYFAIGI 373
           D++FA+ +  + I
Sbjct: 360 DAVFALIFIELKI 372


>gi|221211088|ref|ZP_03584067.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|221168449|gb|EEE00917.1| putative ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
          Length = 446

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     VV           +  DLS I  +D +G + +     +   
Sbjct: 91  TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALWRVWGRKLP 150

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R         L    G  +  F      
Sbjct: 151 PGIALTATQ-----RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 201

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 440 FQNVGL 445


>gi|167647526|ref|YP_001685189.1| hypothetical protein Caul_3564 [Caulobacter sp. K31]
 gi|167349956|gb|ABZ72691.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 371

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 113/370 (30%), Positives = 196/370 (52%), Gaps = 11/370 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G      +G+W +  + +  + ++ A++    SD+  +DL  ++  DT GA  I+   +
Sbjct: 13  EGRKTVMLSGDWTARGMVDAGERLITALD---GSDAVDLDLRDLSRCDTAGAYAIIRAAD 69

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                  ++  S  + +L  L+    + + +   PQ       F+ L   IG+ +    +
Sbjct: 70  GRVSAGHIKANSRTL-RLLQLVGDAIQVEPEAAPPQ-----KGFQALLERIGRGVYGLGD 123

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D       LG ++   G   A   + +     ++      G+  +P+V + +F  GAV+A
Sbjct: 124 DLYGTLGFLGHLLVAIGRCIAKPSRIR--WAPVVALAERSGLDAIPIVAVTTFFIGAVVA 181

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA  L+QFGA++F+++L+ I  LRE  +L+TA+++AGRS S+  AEIGSMK+N+EIDA
Sbjct: 182 LLGANLLTQFGAQVFAVELIGISVLREFNILITAILLAGRSASSFAAEIGSMKMNQEIDA 241

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++ MG+D    L+ PR  AL+I++PLLT +A  + + G  +V W   D+    F  R   
Sbjct: 242 MQVMGVDPYEALVLPRFAALLITIPLLTFIATLAGLAGGMLVTWAVLDLSPTFFLQRMQD 301

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +  + + + GL KAP MA  I  +  ++G  VG    SLG++VT  VV +I  +I ID++
Sbjct: 302 SVGVQHYWIGLSKAPVMAMVIAAIGCRQGMEVGNDVESLGRRVTAAVVHAIFAIIAIDAV 361

Query: 364 FAIFYFAIGI 373
           FA+ Y  + +
Sbjct: 362 FALIYMELDL 371


>gi|121607910|ref|YP_995717.1| hypothetical protein Veis_0920 [Verminephrobacter eiseniae EF01-2]
 gi|121552550|gb|ABM56699.1| protein of unknown function DUF140 [Verminephrobacter eiseniae
           EF01-2]
          Length = 374

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 13/366 (3%)

Query: 10  RFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           +  G W + E+        +   + K     +   DL A+  +D +GA+L+    ++   
Sbjct: 20  QLYGRWGAAELGNAAQWQALSGQLRKHPAVPTLGWDLRALQWLDHVGAQLLWNHWQRAWP 79

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +      S       S+++   +       P              H+G  ++  +  +  
Sbjct: 80  QQLACTDSQ-----RSMLARVAQFSTTAPPPAPW----RLAAQVDHLGLLVLHGVEHARH 130

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG ++ +      +    +G    +   +Y +G + +P+  L+ F+ G V+A   +
Sbjct: 131 ILEMLGQLVLDLARLARAPR--RGPWRDVSGHLYRMGATALPITALVGFLIGVVLAYLMS 188

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 189 LQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDAMRVM 248

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     L+ PR  AL +++PLL++    +A+ G  +       I  A F     +    
Sbjct: 249 GIAHGFRLVLPRTLALALAMPLLSLWTTLAALAGGMLAADLTMGISPAYFAQALPAAVRP 308

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N+   + K+      I ++    G  V   + SLG+  T  VV +I++VI++D+LFA+ 
Sbjct: 309 GNLGLAMAKSVVFGAGIALIGCHWGLRVRPDTQSLGEGTTASVVSAITMVIVVDALFAVT 368

Query: 368 YFAIGI 373
           +  IGI
Sbjct: 369 FKTIGI 374


>gi|222109464|ref|YP_002551728.1| hypothetical protein Dtpsy_0244 [Acidovorax ebreus TPSY]
 gi|221728908|gb|ACM31728.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 372

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 167/361 (46%), Gaps = 11/361 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
            G W +   ++      +A             L  +  +D +GA+++     +       
Sbjct: 22  QGEWVAAAFADRRAWRRVAAQLKDCGPGVAWSLQGVQRLDHVGAQILWNHWGRAW----- 76

Query: 72  QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131
                   +L         +  +   P          +    +G  ++  ++       +
Sbjct: 77  ----PEQLELTENQREMLERVAQYTTPCEPPAPWRLGDQVDRLGVLVLHALDHVRHLVIL 132

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G ++ +      +    +G    +   +Y +G + +P+  L+ F+ G V+A   + QL 
Sbjct: 133 VGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVVLAYLMSLQLR 190

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           QFGAE F ++++ I  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG+  
Sbjct: 191 QFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPH 250

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
              L+ PR  AL +++PL+ +    +A+ G  +       I  A F     +   ++N++
Sbjct: 251 GFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQALPAAVNVSNLW 310

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             + K+      I ++    G  V  ++ SLG+  T  VV +I++VII+D+LFA+ +  +
Sbjct: 311 LAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVDALFAVAFKNV 370

Query: 372 G 372
           G
Sbjct: 371 G 371


>gi|261885878|ref|ZP_06009917.1| MTA/SAH nucleosidase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 354

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 178/337 (52%), Gaps = 13/337 (3%)

Query: 28  VMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF 87
             ++ +        +DL  +  ID   A        K++   KL   +   +++F+L+S 
Sbjct: 25  KKSLKELRSLKVDTLDLKNLIRIDYSAATFFA----KHYNCPKLINSNDKFDKIFALVSD 80

Query: 88  THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147
            +   ++  K ++S       NL   IGK I+   N+  S    LG  + N  +   + +
Sbjct: 81  KYILNLQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPF 133

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
             +     L    Y  G+S V +V L SF+ G V+A QGA  L  FGA I+ +D+M I+ 
Sbjct: 134 TVR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMT 191

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           LRE+G L+ A+++AGRS S+  A+IG MKI +E++A++TMG +  R ++ PR+ ALI+++
Sbjct: 192 LREVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPRVLALILAM 251

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           P +  LAN  +I G  +V   Y D+ F+ +  RF S+  L + + GL KAPF    I ++
Sbjct: 252 PFIVFLANAVSIFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALI 311

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             K GF V    NS+G+  T  VV  I  +  +D++F
Sbjct: 312 GCKRGFEVSGSINSVGELTTRSVVHEIFWISALDAIF 348


>gi|260425314|ref|ZP_05779294.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
 gi|260423254|gb|EEX16504.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45]
          Length = 366

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 113/367 (30%), Positives = 196/367 (53%), Gaps = 9/367 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G+     ++     +        +      DLS +  +DT GA L+         
Sbjct: 8   TIVLRGDVNLASLASTRAIL------GCEGTIKAFDLSGVGVLDTAGAWLLASCRNAAAL 61

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSC 126
           + +   V         L+           K ++    +++  +    +G+ + K ++   
Sbjct: 62  RGETIAVIGASPAQTLLLETVTDAMADAAKVRQPRGLHHAMGDGLVGLGEAVSKKVSSIA 121

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                LGLV++  G       + +  L +L+  M+  G++ VP+V+L+ F+ G V++ QG
Sbjct: 122 ESLGFLGLVMAQFGWTVLHPSRLR--LTALVHHMHLAGLNAVPIVVLMGFLIGIVLSFQG 179

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL QFGAE++ +DL++I  LRE+G+LLTAV++AGRS SA  A IGSMK+ EEIDA+R 
Sbjct: 180 ASQLKQFGAEVYVVDLIAISILRELGILLTAVIVAGRSASAFTATIGSMKMREEIDAMRV 239

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GLD + +L+ PR+ AL+I LPLL  +A+ + ++G +++ W    I   +F ++  +   
Sbjct: 240 LGLDPIELLVLPRVLALVILLPLLGFIADMAGLVGGALMAWIELGISPGMFRTQLLNNTD 299

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           ++++  GL KAP  A  IG+V   +G  V   + SLG + +  VV +I +VI++D++F+I
Sbjct: 300 VSHLLIGLAKAPVFAVIIGVVGCHQGMQVKGDTESLGNRTSRSVVAAIFLVIVVDAMFSI 359

Query: 367 FYFAIGI 373
           F+   GI
Sbjct: 360 FFAVWGI 366


>gi|89902676|ref|YP_525147.1| hypothetical protein Rfer_3917 [Rhodoferax ferrireducens T118]
 gi|89347413|gb|ABD71616.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118]
          Length = 376

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 175/368 (47%), Gaps = 15/368 (4%)

Query: 10  RFAGNWKSPEISEIADDVVMA----INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           R +G+W +  ++E A+   +     +  +  +     DL  +  +D  GA+++     + 
Sbjct: 20  RLSGDWSAARLAEPANWASLQSGLALGAAGAALEVSWDLRDLQRLDHTGAQVLWNAWGRQ 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +  L  +      + S +            P       S   L   +G  +   I+  
Sbjct: 80  WPRQLL--IEPAQRAMLSRVEQ-------YALPPPVARRTSAWQLFLALGALVWLLIDHL 130

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +  L               KG    +   ++ +G + +P+  L+ F+ G V+A  
Sbjct: 131 RDATRL--LGQLLLDTLRLLRAPAKGPWRDVSGHLFSIGATALPITALLGFLIGVVLAYL 188

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            + QL QFGA+ F ++++ +  +RE+G +L A++IAGRSGS I A+IG M++ EE+DA+R
Sbjct: 189 MSLQLRQFGADSFIVNILGLSVIRELGPVLAAILIAGRSGSTITAQIGVMRVTEELDAMR 248

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     L+ PR  A+ +++PLLT+  + +A++G  +       +  A FF+      
Sbjct: 249 VMGIAKGYRLVLPRAIAMALAMPLLTVWTSLAALLGGMLAADLTMGVTPAYFFAALPRAV 308

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            ++N+   + K+      I ++    G  V  ++ SLG+  T  VV SI++VI++D++FA
Sbjct: 309 EVSNLTLAMGKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSIAMVILVDAVFA 368

Query: 366 IFYFAIGI 373
           + +  IGI
Sbjct: 369 LVFKDIGI 376


>gi|322378616|ref|ZP_08053052.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1]
 gi|322380555|ref|ZP_08054721.1| hypothetical integral membrane protein [Helicobacter suis HS5]
 gi|321147017|gb|EFX41751.1| hypothetical integral membrane protein [Helicobacter suis HS5]
 gi|321148923|gb|EFX43387.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1]
          Length = 368

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 8/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G+W     ++    +   +  +   ++  +D   +  +D +   L+   + +   
Sbjct: 11  TLVLQGSWDFKTSAKALTHLKTILKDAPPIEA--IDFKGVASLDFVFLMLLYDLLGR--R 66

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           K +    S +  ++  ++    R      K +       F N    +G+ +V F N   +
Sbjct: 67  KPEFLNPSAYNAKVLEVVETWIRANPSILKQEHVSRV--FINPLEKLGRGVVSFYNTLLN 124

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             +  G++I   G               LI  ++  G   +PV IL  FV G  IA +GA
Sbjct: 125 TFNFCGMIIYYVGLAFIRPKS--VCWTPLIHHIHESGFKVLPVSILTVFVVGFAIALEGA 182

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL + G  + SI++ + L LRE+G  + A+++AGRS S+  A+IG+MKI EE+DA+ TM
Sbjct: 183 VQLQELGFPMMSIEMTAKLALREMGPFILALVVAGRSASSFTAQIGAMKITEELDAMETM 242

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL+    L+ PR+ AL+I++PLL  LA+  A++GA I I     I FA + +R H    L
Sbjct: 243 GLNPFAFLVLPRVVALVIAMPLLVFLADAFALLGAMIAIKYQLGIGFAHYVARLHENVGL 302

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++ F GLIKAPF   AI +V    GF V  ++ S+G+  T  VV S+  +I +D+LF++ 
Sbjct: 303 SHFFIGLIKAPFWGFAIALVGCMRGFEVKGNTESIGQLTTISVVNSLFWIIFLDALFSVI 362

Query: 368 YFAIGI 373
           +  + +
Sbjct: 363 FSRLDV 368


>gi|187476645|ref|YP_784668.1| membrane protein [Bordetella avium 197N]
 gi|115421231|emb|CAJ47736.1| putative membrane protein [Bordetella avium 197N]
          Length = 377

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 10/366 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    G+W    ++            +        DL  I  +DTIGA L+     +   
Sbjct: 22  VVYLGGDWSLQALAVRGQVQARRDALAQTHAHTRWDLRGIQRLDTIGANLLWRLWGE--R 79

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +   ++    ++F+ ++                      +    IG+ I    ++   
Sbjct: 80  LPERVRLTDGQREVFNALAVNPGAVAPAPPVTDR------LSWVRAIGQAIFDAAHNGIM 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG ++ +           +G    +  Q+Y  G   + +  L+ F+ G V++   A
Sbjct: 134 LLRMLGQLVLDFIGLLLRPS--RGPWREISAQIYRTGAQALGITALVGFLIGVVLSYLSA 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  M
Sbjct: 192 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMSVM 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+   + LI PR+ AL I++PLL +  +  A++G  +       I    F     +  T+
Sbjct: 252 GISQSQRLILPRVVALAITMPLLVLWTDAMALLGGMLAAQMQLGISAQWFLESLPNAVTI 311

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            N + G++K       I +VA   G  +   + SLG+  TT VV SI+ VI++D+L+A+ 
Sbjct: 312 TNYWIGMVKGVSFGVLIALVACHFGLRIKPDTESLGRGTTTSVVTSITGVILVDALYAVI 371

Query: 368 YFAIGI 373
              +GI
Sbjct: 372 LSGMGI 377


>gi|190572714|ref|YP_001970559.1| putative ABC transporter permease [Stenotrophomonas maltophilia
           K279a]
 gi|190010636|emb|CAQ44245.1| putative permease component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
          Length = 373

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 110/365 (30%), Positives = 187/365 (51%), Gaps = 13/365 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G W        A+ +     + +      +D + I ++D+ G   ++    +   
Sbjct: 21  LIRLSGTWTLKTALAAAEVL-----RGVPDTLTGIDATGIEKMDSAGVLQVLRVAHRADL 75

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                      + L   I      + + +                 +G  +    ++  +
Sbjct: 76  GEDALQFRPDHQALVCTIEEVADDRPRPK------RDFGVLAALERLGVSVHATGHNIKA 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA  G+
Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA+RT+
Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD + +L+ PR+ AL+++LPLLT +A  + + G   V     DIP  ++ +R H T  +
Sbjct: 248 GLDPIDLLVLPRLLALLVTLPLLTFIAMIAGLAGGITVGAFDLDIPPQMYIARMHETMEV 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+  A++
Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367

Query: 368 YFAIG 372
           +  + 
Sbjct: 368 FMHMD 372


>gi|254524872|ref|ZP_05136927.1| ABC transporter permease [Stenotrophomonas sp. SKA14]
 gi|219722463|gb|EED40988.1| ABC transporter permease [Stenotrophomonas sp. SKA14]
          Length = 370

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 112/365 (30%), Positives = 187/365 (51%), Gaps = 13/365 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G W        A+ +     + +      +D + I ++D+ G   ++    +   
Sbjct: 18  LIRLSGTWTLKTALAAAEVL-----RGVPEKLTGIDATGIEQMDSAGVLQVLRVAHRADL 72

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                      + L   I      + K +                 +G  +    ++  +
Sbjct: 73  GEDALHFRQDHQALVCTIEEVADDRPKPK------RDFGVLAALERLGVSVHATGHNIKA 126

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG  +           +F+  L + + QM  VG+  VP+V L+S++ GAVIA  G+
Sbjct: 127 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 184

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAEI+ ++L++I  LRE  VLLTA+++AGR+ SA  A+IG+MK  EEIDA+RT+
Sbjct: 185 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 244

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GLD V +L+ PR+ AL+++LPLLT +A  + + G   V     DIP  ++ +R H T  +
Sbjct: 245 GLDPVDLLVLPRLLALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHETMEV 304

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL KAP  A  IG++   EG  V   + S+G++ T+ VVQ+IS+VIIID+  A++
Sbjct: 305 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 364

Query: 368 YFAIG 372
           +  + 
Sbjct: 365 FMHMD 369


>gi|207727753|ref|YP_002256147.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|206590994|emb|CAQ56606.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
          Length = 374

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G +V   +G+W +  ++E A         ++   ++    L+ +  ID  GA+L+    
Sbjct: 15  DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +         ++   ++                      N    +G  ++ F 
Sbjct: 75  GNRWP--EHLDARADQRRMIDRVARLD-------PGGWKKRIAPRINPVTVLGGAMLDFA 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  + +  +G    +   +Y  G   + +  L+ F+ G V+
Sbjct: 126 GHLRIGVAMVGQLMFDLLRFARAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FGA IF ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+D
Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG+     LI P++ AL I++PLL    +  A+ G  +      DI    F +   
Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN++ G+ K       I +VA   G  +  ++ SLG+  TT VV SI++VI+ D+
Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITVVILADA 363

Query: 363 LFAIFYFAIGI 373
           +FAI +  +GI
Sbjct: 364 VFAILFKDVGI 374


>gi|121998618|ref|YP_001003405.1| hypothetical protein Hhal_1839 [Halorhodospira halophila SL1]
 gi|121590023|gb|ABM62603.1| protein of unknown function DUF140 [Halorhodospira halophila SL1]
          Length = 376

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 108/365 (29%), Positives = 182/365 (49%), Gaps = 8/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+W           ++  + ++       VDLSA+  +DT GA L+   +     +
Sbjct: 18  VRIRGDWTLAHY----RTLLRQVEQTRLGGEPRVDLSALGRLDTAGATLLARLLGAARVE 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
              +       +   L+        + +  P+          L   +G ++    +    
Sbjct: 74  ALARSTPELSAERRKLLQAVAAASERARTAPEPRGDPYFLGQLTIGLGAQMTHAGHQLAR 133

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                GLVI+         ++++  L ++ RQ+ +  +  +P+V L++F  GAVIA  G 
Sbjct: 134 AIGFTGLVIAAFAAGLLRPWRWR--LAAVSRQLQHTALEALPIVALLTFAVGAVIAVLGV 191

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L +FGA IF++DL++   LRE GV+LTA+++AGRS SA  A+IGSMK NEE+DA+R  
Sbjct: 192 TVLGRFGAGIFTVDLVAYAFLREFGVVLTAILLAGRSASAFTAQIGSMKANEELDAMRAQ 251

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G   + +L+ PR+ AL+I++PLL+ +A    + G  +V     D+P        +S  ++
Sbjct: 252 GFSPIEMLVIPRVVALLIAVPLLSFVAVVCGLAGGGLVTLLNVDVPAGR-IIALYSDISV 310

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   GL KAP  A  I I+   EG      + S+G   T+ VVQSI  VII++++ A+ 
Sbjct: 311 SHYLAGLAKAPIFAFVIAIIGCLEGIKCSASAQSVGTHTTSAVVQSIFWVIILNAVAALI 370

Query: 368 YFAIG 372
           Y  +G
Sbjct: 371 YVELG 375


>gi|217970678|ref|YP_002355912.1| hypothetical protein Tmz1t_2277 [Thauera sp. MZ1T]
 gi|217508005|gb|ACK55016.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 371

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 168/369 (45%), Gaps = 12/369 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R AG+W    + E    +  A+        A   L A+  +D+ GA L+      
Sbjct: 13  GAEGIRLAGDWTLRGLDECLPTLRRALATVP--PDARWSLRAVRRMDSFGALLLWQAWGG 70

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                           +   I     + +       +       +    +GK +  F   
Sbjct: 71  RWPAALE--ADDAQRAIIGRIENASARALPEPPRASA------LDAVALLGKGLFAFAGH 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG ++ + G        +   LL +   ++ VGV  +PV  L+ F+ G V++ 
Sbjct: 123 LSGFVALLGRLVLDLGHLLHHPRDWP--LLEISANLHKVGVKAMPVSALVGFLIGVVLSY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FGA+ F ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+
Sbjct: 181 LSALQLRTFGADAFIVNILGMGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDAL 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+     L+ P++ AL +++PLL +  +  A+ G  +  W    I    F       
Sbjct: 241 AAMGVSRSLRLVLPKVVALSLAMPLLVLWTSAIALFGGWVSAWVELGIGLQFFLRALPDA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +AN++ GL K       I +VA   G  V   + SL    T  VV +I++VI++D++F
Sbjct: 301 VPVANLYIGLAKGAVFGFLIALVACHFGLRVKPDTESLSANTTASVVAAITVVILVDAVF 360

Query: 365 AIFYFAIGI 373
           AI   +IG+
Sbjct: 361 AIATRSIGL 369


>gi|167561346|ref|ZP_02354262.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147]
 gi|167568578|ref|ZP_02361452.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786]
          Length = 374

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 169/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++    +V   I +  +      DLS +  +D +G + +     +   
Sbjct: 19  TVRLYGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVVRLDHVGGQALWRVWGRRLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +            L         +  +  + + +       +     G+ +  F      
Sbjct: 79  EGL---------ALTDNQRTVFERIERLDEGREAPEPVVRIDPITRFGQGLFTFGEHLYG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG ++ +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIGLLGRLVIDLLSVLRRPRTMP--WTEISANVYAAGAKALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLAIDLNFFVRSLPSVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLWIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|242278699|ref|YP_002990828.1| hypothetical protein Desal_1226 [Desulfovibrio salexigens DSM 2638]
 gi|242121593|gb|ACS79289.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 371

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 8/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +    +G   +    E+ D    A+     +   +V+ S I  +D  GA L M      
Sbjct: 12  GSTMNISGRLDAEGAGEVWDKARAAVA----AGCLVVECSGIEYLDGGGASLFMMMKAGC 67

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +     ++    +  S +              +       +     +G+       D 
Sbjct: 68  RDRGSSLVINGLRPEFASFLELFD-LDKAAPPSGQVKRKGGIRGWITSVGQSGQAVAADM 126

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
             Q    G  +  +        K +            VG  G+P+++LI F+ G +++ Q
Sbjct: 127 REQIEFTGNCVLASLSTATLKNKLR--WPDFWLTCEKVGADGLPIILLIGFLMGLIMSFQ 184

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A  L +FGAEIF  +++ ++  RE+G ++TA+++AGR+GSA  AEIG+MK+NEE+DA+ 
Sbjct: 185 SAVSLMRFGAEIFVPNMLGLVMFRELGPMVTAILLAGRTGSAFAAEIGTMKVNEELDALN 244

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TMGL+ V  L+ PR+ A +   PLLT+  NF +++G ++V+      P A +  R     
Sbjct: 245 TMGLNPVSFLVLPRVLATVCMTPLLTLFFNFMSLVGGALVM-LSMGYPLATYCGRVFENV 303

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              +   G+IKA   +  +  +  + G      ++++G   T+ VV  I ++ + D +FA
Sbjct: 304 QWMDFSGGMIKAVVFSFLVAGIGCQRGLVTKSGASAVGDSTTSAVVSGIILIAVFDGIFA 363

Query: 366 IFYFAIGI 373
           + +F  GI
Sbjct: 364 VIFFLTGI 371


>gi|303327433|ref|ZP_07357874.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862373|gb|EFL85306.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3]
          Length = 375

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 79/366 (21%), Positives = 152/366 (41%), Gaps = 7/366 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           +    G W   E      D  +A     +     ++ + +   DT     ++  ++    
Sbjct: 17  LVSVGGRWNMEEPWPEEADAALAGIADQRVRELRLEANGLGRWDTSLLVFLVQMVKAARA 76

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +     ++     L   +             + +    S       +G   +        
Sbjct: 77  RKLDVDLA-----LPEGLERLLHMAFAVPAQEGAARKKSDATFLSGLGDAALSLPPTVGD 131

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G V  +         K +      +  MY  GV  +P++ + S + G ++A  GA
Sbjct: 132 FLSFCGEVTLSIWRLFLGRSKMRSQ--DFVAAMYECGVQALPIISVTSMLFGLILAFVGA 189

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL+QFGA+I+   L+ I  LR +G ++  V+++GR G+A  A IG+M++NEE+DA+ T+
Sbjct: 190 VQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAALIGTMQVNEEVDALATL 249

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  V  L+ PR+ AL   +PLLT+ A+   ++G  +V     D+    + +        
Sbjct: 250 GISPVDFLVLPRVLALTAMVPLLTLYADLMGVLGGYLVGVMMLDLNPMEYINATTQMVPF 309

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++  GL+        I +    +G   G  + ++G+  TT VV SI  +I+  +   + 
Sbjct: 310 KHVLIGLVYGTVFGVVIAVAGCYQGMRCGRSAQAVGQATTTAVVHSIVGIIVATAAITVI 369

Query: 368 YFAIGI 373
              +G+
Sbjct: 370 CNVLGV 375


>gi|167585308|ref|ZP_02377696.1| hypothetical protein BuboB_08232 [Burkholderia ubonensis Bu]
          Length = 374

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 173/368 (47%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++     V   +    +      DLS I  ID +G + +     + 
Sbjct: 17  GPTVRLYGQWTALALARNRGAVARRVAGLAKGRVREWDLSGIERIDHVGGQALWRVWGRK 76

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                   +S     +F  I    R++   ++ +R        +    +G+ +  F    
Sbjct: 77  LPDG--IALSETQRTIFERIERLDRQREAPERIER-------IDPVTRLGRALFTFAEHL 127

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                + G V+ +                     +Y  G   +P+  L++F+ G V++  
Sbjct: 128 QGGIAMFGRVMLDALSVLRRPKTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYL 185

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 186 SAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     L+ PR+ AL +++PLL +  N  A+ G ++       I F+ F        
Sbjct: 246 VMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKLALGIDFSFFVRSLPGVV 305

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 306 PIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365

Query: 366 IFYFAIGI 373
           + +  +G+
Sbjct: 366 MLFQNVGL 373


>gi|163744195|ref|ZP_02151555.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
 gi|161381013|gb|EDQ05422.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex
           HEL-45]
          Length = 376

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 130/370 (35%), Positives = 209/370 (56%), Gaps = 13/370 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +     G+    +++ +  D +     S    ++++D++ +  IDT GA +++      
Sbjct: 18  GSRLSICGDLDIGKVACLDRDWLH----SEMHGASVIDIAGLARIDTAGAWVLIDLQAHA 73

Query: 66  --HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
              G   L+G +    QL   +  +         P +S       +    +G+ +V   +
Sbjct: 74  TVPGGAALEGATQAQAQLIETVRRSMLSDAVAAPPTKS-----VGDRLEILGRTVVLGAH 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            + +    LG V++  G   A   + +  L SL+     VG++ VP+V L+SF+ G V+A
Sbjct: 129 KTVALISFLGQVVATMGGILAHPSRLR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVLA 186

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QGA QL QFGAE+F +DL++I  LRE+G+LLTA+++AGRSGSA  A IGSMK+ EE+DA
Sbjct: 187 FQGAAQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEVDA 246

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+GLD V IL+ PR+ AL++ LP L  +A+ S ++G +I+ W    +  AVF  R  S
Sbjct: 247 MRTIGLDPVTILVVPRVLALMLMLPALGFIADISGLLGGAIMSWIDLGVSPAVFQMRLTS 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + +   G+IKAPF A  IGI+   EG  VG  + SLG+  +T VV SI +VI+ D++
Sbjct: 307 NTDVWHFGVGMIKAPFFALIIGIIGCFEGLKVGGDAESLGRLTSTSVVLSIFMVIVADAM 366

Query: 364 FAIFYFAIGI 373
           F+IF+  +G+
Sbjct: 367 FSIFFAIVGV 376


>gi|167617722|ref|ZP_02386353.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4]
 gi|257140414|ref|ZP_05588676.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
          Length = 374

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +   
Sbjct: 19  TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALWRVWGRRLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                        L         +  +    + +       +     G+ +  F      
Sbjct: 79  AGI---------ALTDNQRTVFERIERLDAGREAPEPVVRIDPVTRFGQGLFTFGEHLYG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|118497851|ref|YP_898901.1| ABC transporter membrane protein [Francisella tularensis subsp.
           novicida U112]
 gi|194323824|ref|ZP_03057600.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|254373206|ref|ZP_04988695.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. novicida GA99-3549]
 gi|118423757|gb|ABK90147.1| ABC-type transport system permease protein [Francisella novicida
           U112]
 gi|151570933|gb|EDN36587.1| ABC superfamily ATP binding cassette transporter [Francisella
           novicida GA99-3549]
 gi|194322188|gb|EDX19670.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 366

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 7/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              FAG     +I+     +V       +     +D++ I  +DT GA  I+  ++    
Sbjct: 9   TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +      H ++  +LI             + S   N      Y +GK     + +  +
Sbjct: 66  TKEDLVFDNHKDK--NLIELVANNFPTKVDKENSHKSNIVFTSIYTLGKNTNNLLQEVKA 123

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG ++            ++ F   ++   Y   +  + +V+L+S + G V+     
Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             + Q+G +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+
Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D ++ L+ PRI ALIISLP+LT++A  + IIG  I+      I    F  R  S   +
Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNV 301

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + + GL+K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+ 
Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361

Query: 368 YFAIG 372
              + 
Sbjct: 362 LNGVA 366


>gi|208779915|ref|ZP_03247259.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|254374661|ref|ZP_04990142.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548]
 gi|151572380|gb|EDN38034.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548]
 gi|208744370|gb|EDZ90670.1| conserved hypothetical protein [Francisella novicida FTG]
          Length = 366

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 7/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              FAG     +I+     +V       +     +D++ I  +DT GA  I+  ++    
Sbjct: 9   TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +      H ++  +LI             + S   N      Y +GK     + +  +
Sbjct: 66  TKEDLVFDNHKDK--NLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEVKA 123

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG ++            ++ F   ++   Y   +  + +V+L+S + G V+     
Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             + Q+G +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+
Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D ++ L+ PRI ALIISLP+LT++A  + IIG  I+      I    F  R  S   +
Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNV 301

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + + GL+K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+ 
Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361

Query: 368 YFAIG 372
              + 
Sbjct: 362 LNGVA 366


>gi|332184385|gb|AEE26639.1| ABC-type transport system permease protein [Francisella cf.
           novicida 3523]
          Length = 366

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 109/365 (29%), Positives = 179/365 (49%), Gaps = 7/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              FAG     +I+     +V       +     +D++ I  +DT GA  I+  ++    
Sbjct: 9   TIYFAGLLTLKQINP---KLVEKKISRTKVKLKQIDITKIQSLDTAGAYFILRVLKDLGL 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             K   +++  ++  +LI             + S   N      Y +GK     + +  +
Sbjct: 66  TKKDLILNSDKDK--NLIELVANNFPTKIDKEYSHKSNIVFTSIYTLGKNTNNLLQEIKA 123

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG ++            +K F   ++   Y   +  + +V+L+S + G V+     
Sbjct: 124 SIGFLGAILLGYLTLIRKP--YKSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             + Q+G +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+
Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D ++ L+ PRI ALIISLP+LT++A  + IIG  I+      I    F  R  S   +
Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADIIAGITPLQFIERLFSNVNV 301

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + + GL+K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+ 
Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361

Query: 368 YFAIG 372
              + 
Sbjct: 362 LNGVA 366


>gi|134297087|ref|YP_001120822.1| hypothetical protein Bcep1808_2996 [Burkholderia vietnamiensis G4]
 gi|134140244|gb|ABO55987.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4]
          Length = 374

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 170/366 (46%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     +   +     +     DLS I  +D +G + +     +   
Sbjct: 19  TVRLYGQWTALALARNRGAITRRVAGLASARPREWDLSGIERLDHVGGQALWRVWGR--- 75

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             KL       +   ++     R   + + P+R   ++    L    G  I  F      
Sbjct: 76  --KLPAGVELSDTQRTIFERIERLDSQREAPERVVRFDPVTRL----GLAIFTFGEHLQG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A IG M++ EE+DA+R M
Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITARIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     L+ PR+ AL +++PLL +  N  A+ G ++       I F  F         +
Sbjct: 248 GIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLAIDFNYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|56708309|ref|YP_170205.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670780|ref|YP_667337.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301737|ref|YP_001121705.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|187931809|ref|YP_001891794.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|224457429|ref|ZP_03665902.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370792|ref|ZP_04986797.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254875129|ref|ZP_05247839.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604801|emb|CAG45880.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321113|emb|CAL09263.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049514|gb|ABO46585.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569035|gb|EDN34689.1| ABC superfamily ATP binding cassette transporter [Francisella
           tularensis subsp. tularensis FSC033]
 gi|187712718|gb|ACD31015.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|254841128|gb|EET19564.1| ABC transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159540|gb|ADA78931.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 366

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              FAG     +I+     +V       +     +D++ I  +DT GA  I+  ++    
Sbjct: 9   TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +      H ++  +LI             + S   N      Y +GK     + +  +
Sbjct: 66  TKEDLVFDNHKDK--NLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKA 123

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG ++            ++ F   ++   Y   +  + +V+L+S + G V+     
Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             + Q+G +IF +D++ I   RE   L TA++IAGRS SA  +EIG MK+NEEIDA++T+
Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTI 241

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D ++ L+ PRI ALIISLP+LT++A  + II   I+      I    F  R  S   +
Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNV 301

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + + GL+K PF A  I  +   +G AV   S S+GK  TT VV SI ++I++D++FA+ 
Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361

Query: 368 YFAIG 372
              + 
Sbjct: 362 LNGVA 366


>gi|167579644|ref|ZP_02372518.1| ABC transporter, permease protein [Burkholderia thailandensis
           TXDOH]
          Length = 374

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R +G W +  ++    +V   I +  +      DLS +  +D +G + +     +   
Sbjct: 19  TARLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALWRVWGRRLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                        L         +  +    + +       +     G+ +  F      
Sbjct: 79  AGI---------ALTDNQRTVFERIERLDAGREAPEPVVRIDPVTRFGQGLFTFGEHLYG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +
Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|237749352|ref|ZP_04579832.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
 gi|229380714|gb|EEO30805.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
          Length = 374

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 13/370 (3%)

Query: 5   GITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             +     G W+   ++     + +   I+        + DL+ I E+D I A+ +    
Sbjct: 15  DASKVVARGCWRVEVLASAGTINRLKSTIHSYSGKTGIVWDLTRIRELDYISAQFLWESW 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +         ++    + F+ +    + K+ +      + +  F+N+       + K  
Sbjct: 75  GEKRPANLA--LTEEQGRFFARLEQAGQLKLPDTTKPFLWPWQRFRNI-------VHKVS 125

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                   ++G ++ +   F  +    +G    +   +Y+ G   + +  ++ F+ G V+
Sbjct: 126 EHFSGMVALVGQLMIDIVNFAKAPR--RGPWTEISANIYHAGAQALGITAVVGFLIGVVL 183

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           +   A QL  FG ++F ++L+ I  LRE+G LL A+++AGRSGS++ A++G M++ EE+ 
Sbjct: 184 SYLSAQQLHMFGGDVFLVNLLGISVLRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELS 243

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MGL     LI P++ AL I +PLL I  +  A++G  +       +  + F +   
Sbjct: 244 AMQVMGLPQGFRLIMPKVIALSIVMPLLVIWTDVIALLGGMLAGSYEIGLSMSYFLASLP 303

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               +AN + G+ K       I ++A   G  +  ++ SLG+  T  VV SI++VI+ D+
Sbjct: 304 DAVPIANFWIGVGKGYVFGILIALIACYYGLKIKPNTESLGEGTTRSVVTSITVVILADA 363

Query: 363 LFAIFYFAIG 372
           +FAI    +G
Sbjct: 364 IFAIVLQGVG 373


>gi|77920339|ref|YP_358154.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
 gi|77546422|gb|ABA89984.1| ABC-type transport system, permease component [Pelobacter
           carbinolicus DSM 2380]
          Length = 386

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/375 (26%), Positives = 174/375 (46%), Gaps = 14/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++  I    FAG   +   + +   ++  +         +++   I   D  G  L M  
Sbjct: 23  NDAEILSLSFAGKLDAAATALLWKPLLE-LAHQTAPRLLLIEADQINYCDGAGIGLFMEL 81

Query: 62  MEKYHGKI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
             +   +    +L+G+     +L+SL        ++  +P           L   IG++ 
Sbjct: 82  ARQQQKRQQRFELKGLKEEFARLWSLYRPEDFMDLRGSRPHPC-------CLPEEIGRQA 134

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                     A   G + S            +     +   M   GV+ +P+V LISF+ 
Sbjct: 135 CLAGQGIVDMARFTGELTSALLHAARHPRSVR--WPEVWLVMEKAGVNSLPIVGLISFLI 192

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A Q    + QFG EI+  +L ++  LRE+G L+TA+++AGRS SA  AE+G+MKIN
Sbjct: 193 GLIMAFQATIPMRQFGVEIYVANLTALSMLRELGPLMTALLLAGRSSSAFAAELGTMKIN 252

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ TMGL  +  L+  R+ A +I LPLL++ AN   +IG ++V       P   + 
Sbjct: 253 EEIDALTTMGLAPIPFLVVTRVLATVIILPLLSLFANLMGLIGGAVV-LLSLGYPLVTYT 311

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +   L ++  GL+K    A  +  V    G      ++++G   T  VV  I +++
Sbjct: 312 NQVKAAVNLGDLTGGLVKTLVFALIVAGVGCLYGLKTRSGASAVGDSATRAVVSGIILIV 371

Query: 359 IIDSLFAIFYFAIGI 373
           + D LFA+ Y+ +GI
Sbjct: 372 VADGLFAVVYYFLGI 386


>gi|241668212|ref|ZP_04755790.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254876747|ref|ZP_05249457.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842768|gb|EET21182.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 365

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 107/359 (29%), Positives = 178/359 (49%), Gaps = 7/359 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              F G     +I      ++       + D   +DL+ +T +DT GA +I+   +    
Sbjct: 9   TIYFEGILTLKQID---SKLIDKKISRSKDDIKQIDLTKVTLLDTAGAYIIIKTAKNLRL 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +    +   ++  +L+    +      + + S   N   N  Y +GK     +++  +
Sbjct: 66  SKENIIFANEKDK--NLVDIVFKNFPSTAEEELSNKSNVVFNSIYTLGKNTNNLLSEVKT 123

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG +             +K F   ++   Y   +  + +VIL+S + G V+     
Sbjct: 124 SISFLGAIFLGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPL 181

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L Q+G +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+
Sbjct: 182 NLLMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D ++ L+ PRI AL+ISLP+LT++A  + I G  I+      I    F  R  S   +
Sbjct: 242 GEDPMQRLVLPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNV 301

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            + + GL+K PF A  I  +   +G +V   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360


>gi|239907930|ref|YP_002954671.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
 gi|239797796|dbj|BAH76785.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
          Length = 384

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 173/376 (46%), Gaps = 12/376 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE---L 57
           ++  G+    F+G+W+  +     + V  A+  S      ++    +T  D++       
Sbjct: 18  VASGGVVTLTFSGSWRMDQTLPDIEAVRQALAASPAPQKLVLAGEGVTGWDSLFLTQCRA 77

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           I+    +    +    +   +E L +L +    ++   +  +R+ F     ++ Y   + 
Sbjct: 78  IIALARERGVAVDAGALPPGVESLLALAAKVPERQGAARAAKRTPFLERMADMGYGAAQG 137

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +   ++         G V            +       L   +Y   +  + +V LISF+
Sbjct: 138 VRNLLD-------FTGDVTLAAWALVTG--RAVFQRSQLTTLIYQASIDALGIVSLISFL 188

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+M++
Sbjct: 189 VGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQV 248

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+RT G    + L+ PR+ AL++ +PLL I A+   I+G  +V      I    +
Sbjct: 249 NEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADLMGIMGGFVVGVFMLKINPIQY 308

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +    +  LAN + GL+ +      + +     G   G  +  +G+  T  VV SI  +
Sbjct: 309 LTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALGVGQATTAAVVTSILAI 368

Query: 358 IIIDSLFAIFYFAIGI 373
           +I  ++  +    IG+
Sbjct: 369 VIATAILTVCCNIIGV 384


>gi|323700846|ref|ZP_08112758.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132]
 gi|323460778|gb|EGB16643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           ND132]
          Length = 381

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 93/374 (24%), Positives = 174/374 (46%), Gaps = 14/374 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G  V   +G   +   + +  + V   + S        D   +T +D  G  L++   
Sbjct: 19  RDGGLVLALSGRLDAAGTTAVWAEAVKGASGS-GFSRLTADCGGVTYMDGSGVALLLKLK 77

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
           E   +    I+L  +     +L  L             P++       + L   +G    
Sbjct: 78  ELCAEKKAAIELTNLREEDSRLVDL-------TWDTALPKQRDSERERRGLAEAVGAAGG 130

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +  ++       +G   S  G         +     ++     VGV  + +++LI F+ G
Sbjct: 131 ELWHNVREMIAFVGESFSLLGRAAVHPGMVR--WKDVVLACINVGVESMFIIVLIGFLMG 188

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +++ Q A  L +FG EIF  +++ ++  RE+G L+T++++A RSGSA  AEIG+MKINE
Sbjct: 189 LIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTSILLAARSGSAFAAEIGTMKINE 248

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+ TMGL  +R L+ P++ A +  +PL+T+  N ++++G ++V+      P   F S
Sbjct: 249 ELDALTTMGLSPMRFLVVPKLLATMAMVPLMTMFFNLASLVGGALVM-LSMGYPLVTFTS 307

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           R  +  +  + + G+ K    +  +  V    G      ++++G   T+ VV  I ++  
Sbjct: 308 RVFANVSATDFWGGMAKGLVFSFLVAGVGCLRGMQTRSGASAVGLSTTSAVVSGIILIAF 367

Query: 360 IDSLFAIFYFAIGI 373
            D LFA+ Y+ +GI
Sbjct: 368 ADGLFAVAYYYLGI 381


>gi|296134762|ref|YP_003642004.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
 gi|295794884|gb|ADG29674.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
          Length = 380

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 185/366 (50%), Gaps = 14/366 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R  G W +  ++   +  +        +    +D SA T +DT GA L++  M ++
Sbjct: 27  RRVCRLQGAWNAQGLAREPNTHL-----PAGTRHVTLDASA-TTLDTPGALLLVRSMAQW 80

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                   VS        L+    ++ +                L   IG+  +  +++ 
Sbjct: 81  QSAGATVDVSGLSPPQQQLLDLVRQRALALPP------AARRLGLLGDIGRATLIALDEL 134

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G ++          ++ +     +I ++   G+  + ++ L+SF+ G V+A Q
Sbjct: 135 RALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVMAYQ 192

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
               L+ +GA I  ++L+SI+ LRE+G LLTA+++AGR+GS+  A+IG+M+I EE+DA+R
Sbjct: 193 AGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDALR 252

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            +GL    +L+ P++ AL+I+LPLL + A+   + G  +V    Y +P + + +R     
Sbjct: 253 ALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQVV 312

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L  +  GL+KAP  A  I +V   +G  V   + ++G+  T  VVQ+I +VI+ID+ F+
Sbjct: 313 GLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASFS 372

Query: 366 IFYFAI 371
           + Y  +
Sbjct: 373 VLYNLL 378


>gi|89256086|ref|YP_513448.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314562|ref|YP_763285.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502103|ref|YP_001428168.1| ABC transporter membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010771|ref|ZP_02275702.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367414|ref|ZP_04983440.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290954528|ref|ZP_06559149.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312044|ref|ZP_06802859.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143917|emb|CAJ79136.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129461|gb|ABI82648.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Francisella tularensis subsp. holarctica OSU18]
 gi|134253230|gb|EBA52324.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|156252706|gb|ABU61212.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 366

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 7/365 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              FAG     +I+     +V       +     +D++ I  +DT GA  I+  ++    
Sbjct: 9   TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +      H ++  +LI             + S   N      Y +GK     + +  +
Sbjct: 66  TKEDLIFDNHKDK--NLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKA 123

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG ++            ++ F   ++   Y   +  + +V+L+S + G V+     
Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             + Q+  +IF +D++ I   RE   L TA++IAGRS SA  +EIG MK+NEEIDA++T+
Sbjct: 182 NLMMQYSTQIFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTI 241

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D ++ L+ PRI ALIISLP+LT++A  + II   I+      I    F  R  S   +
Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNV 301

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + + GL+K PF A  I  +   +G AV   S S+GK  T  VV SI ++I+ID++FA+ 
Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTNSVVYSIFLIIVIDAIFAVA 361

Query: 368 YFAIG 372
              + 
Sbjct: 362 LNGVA 366


>gi|88706598|ref|ZP_01104301.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter
           litoralis KT71]
 gi|88699094|gb|EAQ96210.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter
           litoralis KT71]
          Length = 370

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 17/376 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEID---TIGAEL 57
           +S +G    + +G+W S E+  +       +      DS  VD+S +++ D     G   
Sbjct: 9   LSADGD-QLQISGDWTSAELPALVPLFTTLLE---TRDSPAVDVSEVSDWDPRLEAGLLR 64

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           +    +     I+  G      QL +L +     +         F     +     IG  
Sbjct: 65  LQRLAQAKARDIRYLGAPDSQTQLMNLATAVAPYEAPAASATGFFSTKQLRRSLADIG-- 122

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                +D       LG V              +      +  +   G   + ++ L S +
Sbjct: 123 -----DDLLDSLEFLGGVGIALWRTLTGRSGMRR--REFVESLAQAGPQAIGIITLTSIL 175

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  GA QL QFGA +F  DL++I  LRE+G L+TAV++AGR+G+A  A++ +M+ 
Sbjct: 176 VGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAVVMAGRTGAAYAAQLSTMQT 235

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDAI T+G+D +  L++PR+ AL + +PLL + A+   +     V+     +    +
Sbjct: 236 NEEIDAISTLGIDPMEFLVAPRVLALFLMMPLLVVYADALGV-LGGAVVAGGMGVTPLQY 294

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            S+  +  T  + F G+ K    A  I     + G   G +S ++G+  T  VV ++  +
Sbjct: 295 ISQLSAAITPTHFFVGIFKGFVFAALIATAGCRAGMNAGRNSEAVGQATTEAVVTAVVYL 354

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D+   I    + I
Sbjct: 355 IVADAGINILCQLLDI 370


>gi|167717852|ref|ZP_02401088.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98]
          Length = 374

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++    +V   I +  +      DLS +  +D +G + +     + 
Sbjct: 17  GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 76

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                          L         +  +    + S       +     G+ +  F    
Sbjct: 77  ---------LPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 127

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG +I +                 +   +Y  G   +P+  L++F+ G V++  
Sbjct: 128 YGGIALLGSLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 185

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 186 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S  
Sbjct: 246 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 305

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 306 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365

Query: 366 IFYFAIGI 373
           I +  +G+
Sbjct: 366 ILFQNVGL 373


>gi|294338723|emb|CAZ87055.1| putative ABC-type transport system, permease component [Thiomonas
           sp. 3As]
          Length = 380

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 184/366 (50%), Gaps = 14/366 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R  G W +  ++   +  +        +    +D SA T +DT GA L++  M ++
Sbjct: 27  RRVCRLQGAWNAQGLAREPNTHL-----PAGTRHVTLDASA-TTLDTPGALLLVRSMAQW 80

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                    S        L+    ++ +                L   IG+  +  +++ 
Sbjct: 81  QSAGATVDASGLSPPQQQLLDLVRQRALALPP------AARRLGLLGDIGRATLIALDEL 134

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G ++          ++ +     +I ++   G+  + ++ L+SF+ G V+A Q
Sbjct: 135 RALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVMAYQ 192

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
               L+ +GA I  ++L+SI+ LRE+G LLTA+++AGR+GS+  A+IG+M+I EE+DA+R
Sbjct: 193 AGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDALR 252

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            +GL    +L+ P++ AL+I+LPLL + A+   + G  +V    Y +P + + +R     
Sbjct: 253 ALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQVV 312

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L  +  GL+KAP  A  I +V   +G  V   + ++G+  T  VVQ+I +VI+ID+ F+
Sbjct: 313 GLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASFS 372

Query: 366 IFYFAI 371
           + Y  +
Sbjct: 373 VLYNLL 378


>gi|167627644|ref|YP_001678144.1| ABC-type transport system permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597645|gb|ABZ87643.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 365

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 107/359 (29%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              F G     +I      ++       + D    DL+ +T +DT GA +I+   +    
Sbjct: 9   TIYFEGILTLKQID---SKLIDKKISRSKDDIKQFDLTKVTLLDTAGAYIIIKTAKNLSL 65

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
             +    +   ++  +L+    +      + + S   N   N  Y +GK     +++  +
Sbjct: 66  SKENIIFANEKDK--NLVDIVFKNFPSTAEEELSSKSNVVFNSIYTLGKNTNNLLSEIKT 123

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG +             +K F   ++   Y   +  + +VIL+S + G V+     
Sbjct: 124 SISFLGAIFLGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPL 181

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L Q+G +IF +D++ I   RE   L TA++IAGRSGSA  +EIG MK+NEEIDA++T+
Sbjct: 182 NLLMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G D ++ L+ PRI AL+ISLP+LT++A  + I G  I+      I    F  R  S   +
Sbjct: 242 GEDPMQRLVLPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNV 301

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            + + GL+K PF A  I  +   +G +V   S S+GK  TT VV SI ++I++D++FA+
Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360


>gi|254176752|ref|ZP_04883409.1| putative ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254202028|ref|ZP_04908392.1| putative ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|254207359|ref|ZP_04913710.1| putative ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|147747922|gb|EDK54998.1| putative ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|147752901|gb|EDK59967.1| putative ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|160697793|gb|EDP87763.1| putative ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
          Length = 374

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++    +V   I +  +      DLS +  +D +G + +     + 
Sbjct: 17  GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 76

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                          L        ++  +    + S       +     G+ +  F    
Sbjct: 77  ---------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 127

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG +I +                 +   +Y  G   +P+  L++F+ G V++  
Sbjct: 128 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 185

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 186 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S  
Sbjct: 246 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 305

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 306 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365

Query: 366 IFYFAIGI 373
           I +  +G+
Sbjct: 366 ILFQNVGL 373


>gi|53718041|ref|YP_107027.1| hypothetical protein BPSL0401 [Burkholderia pseudomallei K96243]
 gi|76809874|ref|YP_332026.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|126441439|ref|YP_001057484.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126452246|ref|YP_001064733.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134279780|ref|ZP_01766492.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|167736870|ref|ZP_02409644.1| ABC transporter, permease protein [Burkholderia pseudomallei 14]
 gi|167813976|ref|ZP_02445656.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
 gi|167822497|ref|ZP_02453968.1| ABC transporter, permease protein [Burkholderia pseudomallei 9]
 gi|167844078|ref|ZP_02469586.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210]
 gi|167892582|ref|ZP_02479984.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894]
 gi|167901079|ref|ZP_02488284.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167909299|ref|ZP_02496390.1| ABC transporter, permease protein [Burkholderia pseudomallei 112]
 gi|167917331|ref|ZP_02504422.1| ABC transporter, permease protein [Burkholderia pseudomallei
           BCC215]
 gi|226193717|ref|ZP_03789320.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237810635|ref|YP_002895086.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242316672|ref|ZP_04815688.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254181998|ref|ZP_04888595.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254187927|ref|ZP_04894439.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196514|ref|ZP_04902938.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254260256|ref|ZP_04951310.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254295953|ref|ZP_04963410.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|52208455|emb|CAH34389.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|76579327|gb|ABA48802.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|126220932|gb|ABN84438.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126225888|gb|ABN89428.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134248980|gb|EBA49062.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|157805700|gb|EDO82870.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157935607|gb|EDO91277.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169653257|gb|EDS85950.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184212536|gb|EDU09579.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|225934295|gb|EEH30279.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504399|gb|ACQ96717.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242139911|gb|EES26313.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254218945|gb|EET08329.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 374

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++    +V   I +  +      DLS +  +D +G + +     + 
Sbjct: 17  GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 76

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                          L         +  +    + S       +     G+ +  F    
Sbjct: 77  ---------LPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 127

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG +I +                 +   +Y  G   +P+  L++F+ G V++  
Sbjct: 128 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 185

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 186 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S  
Sbjct: 246 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 305

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 306 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365

Query: 366 IFYFAIGI 373
           I +  +G+
Sbjct: 366 ILFQNVGL 373


>gi|32266623|ref|NP_860655.1| hypothetical protein HH1124 [Helicobacter hepaticus ATCC 51449]
 gi|32262674|gb|AAP77721.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 348

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 4/350 (1%)

Query: 24  ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83
                      I      +D   +++ D +    I   +       ++ G +T   ++F 
Sbjct: 3   KKQREALSEAIISQHKLTIDFKRVSKADFVFCAFIYGLI--VDKDTQIIGTNTRTNEIFQ 60

Query: 84  LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143
            +S +  K+ +      +F       +   +GK+I +F     +  +  G+ +       
Sbjct: 61  TLSSSLPKENEENAINNAFSLKISHMVLIPLGKRIEQFFESFLNFLNFCGMCLWYFFLSL 120

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
            S  +FK    S+   M   G   +PV +L +F+    IA QG  QL + G  + S++++
Sbjct: 121 LSPRRFKC--GSIFYHMNEAGFKALPVALLTAFIVSYAIALQGVLQLEKMGVPLMSVEIV 178

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           + L LRE+G  + A++IAGRS SA  A++G M + EE DA++TM L     LI PR+ AL
Sbjct: 179 AKLSLRELGPFILAIVIAGRSSSAFSAQLGVMNLTEENDALKTMNLSLFDYLILPRVLAL 238

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           II +PLL  LA+  ++  A + +     I F  +  RF+    + +   G+IKAPF   A
Sbjct: 239 IIVMPLLVFLADSVSLFAAMLAVKMQTGINFMQYLERFYEYVGINHFLVGMIKAPFFGAA 298

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           I +V    G  V   + S+G + T  VV ++  VI+I+++F++    + I
Sbjct: 299 IALVGCFRGLYVKGDTESIGLETTKSVVNALFWVILINAIFSVITTRLDI 348


>gi|237752254|ref|ZP_04582734.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376496|gb|EEO26587.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 373

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 96/357 (26%), Positives = 168/357 (47%), Gaps = 12/357 (3%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75
               +  + D +  +  K      A  D      +D  G E+++ ++E       ++   
Sbjct: 28  TLNALYTLLDTLKKSPQKVRIQKDASFD------LDFCGGEVLINWLEHLSECCTIENTL 81

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
               +   + +    K    +K        + K+        +  + +        LG +
Sbjct: 82  LEHSKTAEIFAILQSKTTLEKKEFTQDVIQAHKDTLEI----LKVWGSRLVITLSFLGEI 137

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +        +   F+    +L  Q+    +  VP++ L  F+ G VIA QG+ QL QFGA
Sbjct: 138 VYLLYHSVLNPRDFRI--RALFFQIQEAVIKAVPIISLACFLIGIVIAYQGSLQLRQFGA 195

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
            +  +++ ++L LRE+  ++ A+++AGRS SA  AEIG M+  +EIDA+R MG + V  L
Sbjct: 196 SVLIVEMSAMLTLREMAPIIVAIIVAGRSASAFSAEIGMMRATQEIDAMRVMGFNPVTFL 255

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           I PRI+AL+ +LPL+  +A+   ++G  ++      I    F  RF  T  + + + G++
Sbjct: 256 IFPRIFALLFALPLVVFVADMFGLLGGMLISQLQLGISSEHFIERFLQTVEMRHFWIGML 315

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           KAPF    IG++    GFA    + S+G   T  VV+SI  VI  D+L ++ +  IG
Sbjct: 316 KAPFFGLIIGLIGCYHGFATQKDTRSIGVHTTKSVVESIFCVIAFDALCSVLFTQIG 372


>gi|283853770|ref|ZP_06370995.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283570832|gb|EFC18867.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 385

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 88/353 (24%), Positives = 160/353 (45%), Gaps = 12/353 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMY 60
           NGI     +G W+          V  A+  S      +   +A+T  D+        ++ 
Sbjct: 22  NGILTLTLSGVWRLDRPFPPLAPVKDALATSPAPRKLVFAATAVTGWDSRFLADCRAVLV 81

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +   ++++ G+      L  L +    ++   +K   +            +G   + 
Sbjct: 82  LARERGVEVEVSGLPEGAASLLDLAAKVPERQGAARKTSHA-------AFLESMGDLGLG 134

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F     +    LG V            +      +L+  +Y  GV  +P+V LIS + G 
Sbjct: 135 FAQGVVNLLEFLGEVTLACLALLRG--RAVFQRSNLVTLIYQAGVEALPIVSLISLLVGL 192

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+M++NEE
Sbjct: 193 ILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVNEE 252

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++T G    + L+ PR+ AL++ LPLL + A+   I+G  IV      I    + + 
Sbjct: 253 IDALKTFGFSPTQFLVLPRMIALVLMLPLLCVYADLMGILGGFIVGVFMLHINPIQYLTH 312

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +  LAN + GL+ +      + +     G   G  + ++G+  T+ VV  
Sbjct: 313 TWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQAATSAVVTG 365


>gi|254480123|ref|ZP_05093371.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
 gi|214039685|gb|EEB80344.1| conserved domain protein [marine gamma proteobacterium HTCC2148]
          Length = 376

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 15/377 (3%)

Query: 1   MSEN-GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           ++E+  + V    G+W   +       +   +   I +   +VD S +   D++    ++
Sbjct: 11  LTEDREVAVLLLTGDWVQGQSHRDFHVLKDDLLG-ITASELVVDGSQLGLWDSVLMAFLL 69

Query: 60  YFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
               +        + + +   IE+L  + +        +   ++ +   S        G 
Sbjct: 70  QSFNQCREDNIVFRTRALPDGIERLLDVATAVPTHVPPSAPNKQWYESFSP-------GS 122

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +++    +      +G +              +          Y  G     ++ L S 
Sbjct: 123 LVLELWESTVESLAFIGELGIALWRLALGKANTR--FSDFRTFCYQAGPDAFAIISLTSV 180

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G ++A  GA QL QFGAE++  DL+ I  LRE+GVL+ A+++AGR+G+A  A++G+M+
Sbjct: 181 LVGMILAYLGAVQLQQFGAEVYVADLVVIGMLREMGVLMAAIVMAGRTGAAYAAQLGTMQ 240

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            NEEIDAIRTMG+  +  L+ PR+ AL++++PLLT+ AN    I    ++     +   +
Sbjct: 241 ANEEIDAIRTMGISPMEFLVVPRMLALVVAMPLLTLYANLL-GIIGGGIVSGGLGVTPLM 299

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           + S   +   L+++  GLIK+      I +   + G   G  S ++G+  T  VV +I  
Sbjct: 300 YISEGETALQLSHLSVGLIKSVVFGVLIAVAGCRSGINSGRSSAAVGQAATQAVVTAIVY 359

Query: 357 VIIIDSLFAIFYFAIGI 373
           +I+ D+   I +  +GI
Sbjct: 360 LIVADAAINILFQQVGI 376


>gi|303247224|ref|ZP_07333498.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302491383|gb|EFL51271.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 368

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 160/354 (45%), Gaps = 12/354 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE---LIM 59
            +G+    F+G W+    S     +  A+ KS    +   + + +T+ D+        I+
Sbjct: 4   SDGVLTLTFSGTWRIDRPSPDLSPIRAALGKSPAPKTLAFESAKVTDWDSRFLTQCRAIL 63

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
              + +     L G+    + L  L      ++   +K   + F     ++         
Sbjct: 64  ALAKAHGVTPDLSGLPAGAKSLLELAEKVPERQGAARKEASTPFLTRVADM-------AF 116

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +    +G V            +      +L   +Y  GV  +P+V LIS + G
Sbjct: 117 GAWQGVHNLLDFVGDVTLACLALAGG--RAVFQRSNLFALIYQAGVEALPIVSLISLLVG 174

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            ++A  GA QLSQFGA+I+   ++ I  +R +G ++T +++AGR+G+A  AE+G+M++NE
Sbjct: 175 LILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVNE 234

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+RT G    + L+ PR+ AL++ +PLL I A+   I+G  IV      I    + +
Sbjct: 235 EIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADIMGILGGFIVGVFMLKINPIQYLT 294

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
               +  LAN + GL+ +      + +     G   G  + ++G+  T  VV S
Sbjct: 295 HTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQATTAAVVTS 348


>gi|224437093|ref|ZP_03658074.1| hypothetical protein HcinC1_03955 [Helicobacter cinaedi CCUG 18818]
 gi|313143563|ref|ZP_07805756.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818]
 gi|313128594|gb|EFR46211.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818]
          Length = 367

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 11/370 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  + +F G   + + S               ++   +D   IT++D +    I   +E
Sbjct: 9   SGRMLIKFQG---ACDYSLDKKSKDFLSKLISANERITLDFLEITKVDFVFCAFIYGLLE 65

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                 ++    + ++++F  +  +  K   ++    S FY +  +     GK   +   
Sbjct: 66  --GKDYEILNADSQVKEIFQSMVESLPKLENSKSKSHSMFYGALFDF----GKFCERSYQ 119

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
            S    +  G+        C +   FK  L S++  +   G   +PV +L +F+    IA
Sbjct: 120 SSLDFLNFFGMCSFYFFRSCWNLRHFK--LGSIMYHINESGFKALPVALLTAFIVSYAIA 177

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            QG  QL + G  + S+++++ L LRE+G  + A++IAGRS S+  A+IG M + EE DA
Sbjct: 178 LQGVLQLEKMGVPLMSVEIVAKLSLREMGPFILAIVIAGRSSSSFAAQIGVMNLTEENDA 237

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++TM L     +I PRI AL+I +PLL  LA+  ++    + I     + F  +  RF+ 
Sbjct: 238 LKTMNLSLFDYIILPRILALVIIMPLLVFLADAVSLFACFLAINMQTGLDFMQYLERFYE 297

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + N + G+IKAPF   A+ +V    G  V   + S+G + T  VV +I  VI+I+++
Sbjct: 298 YVGINNFWVGVIKAPFFGAAVALVGCFRGLYVKGDTESVGIETTKSVVNAIFWVILINAI 357

Query: 364 FAIFYFAIGI 373
           F+I    + I
Sbjct: 358 FSIITTGLNI 367


>gi|67642420|ref|ZP_00441177.1| putative ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|121598966|ref|YP_991583.1| putative ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126450485|ref|YP_001082718.1| putative ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|251768288|ref|ZP_02270158.2| putative ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|254357616|ref|ZP_04973890.1| putative ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|121227776|gb|ABM50294.1| putative ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126243355|gb|ABO06448.1| putative ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|148026680|gb|EDK84765.1| putative ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|238523569|gb|EEP87007.1| putative ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|243060282|gb|EES42468.1| putative ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
          Length = 366

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++    +V   I +  +      DLS +  +D +G + +     + 
Sbjct: 9   GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 68

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                          L        ++  +    + S       +     G+ +  F    
Sbjct: 69  ---------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 119

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG +I +                 +   +Y  G   +P+  L++F+ G V++  
Sbjct: 120 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 177

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 178 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 237

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S  
Sbjct: 238 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 297

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 298 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 357

Query: 366 IFYFAIGI 373
           I +  +G+
Sbjct: 358 ILFQNVGL 365


>gi|217419400|ref|ZP_03450906.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|217396704|gb|EEC36720.1| putative ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
          Length = 366

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 11/368 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R  G W +  ++    +V   I +  +      DLS +  +D +G + +     + 
Sbjct: 9   GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 68

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                          L         +  +    + S       +     G+ +  F    
Sbjct: 69  ---------LPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 119

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                +LG +I +                 +   +Y  G   +P+  L++F+ G V++  
Sbjct: 120 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 177

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 178 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 237

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S  
Sbjct: 238 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 297

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FA
Sbjct: 298 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 357

Query: 366 IFYFAIGI 373
           I +  +G+
Sbjct: 358 ILFQNVGL 365


>gi|297569477|ref|YP_003690821.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925392|gb|ADH86202.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 368

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 176/372 (47%), Gaps = 15/372 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G    + AG+W   E++     +   +  +     A   L  +  +D+ GA L+   
Sbjct: 10  ARDGR---QLAGSWTLGELARHLAAIRPQLQATPAG--ASWSLREVERLDSFGAMLLWQH 64

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +   K          ++L  +I+       +       F   +       +G  +  F
Sbjct: 65  WGRSWPKNLEIN-----DELRGVIAAVAAHSGRPLPRPHRF---TLLEALVLLGSMLFTF 116

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +  +     +LG ++ +         ++   L  L   MY VGV  +PV  L+ F+ G V
Sbjct: 117 LGHARDLVTLLGQLLLDLLFLVRHPRQWP--LRELSANMYKVGVKAMPVAALVGFLIGVV 174

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++   A QL  FG E++ ID++ +  +RE+G +L A+++AGRSGSA+ A++G M++ EEI
Sbjct: 175 LSYLSAMQLEAFGVEVYLIDILGLGIIRELGPVLVAILVAGRSGSAMTAQLGVMRVTEEI 234

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+     L+ P++ AL + +PLL +  +  A++G  +       I FA F  + 
Sbjct: 235 DALAAMGISRTIRLVLPKVLALTLVMPLLVLWTSAVALLGGMLSANMQLGISFAFFMEKL 294

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                +AN++ GL K       I +VA   G  +  ++ SL    T  VV +I+ VI++D
Sbjct: 295 PQVVPIANLYIGLGKGAVFGLLIALVACHFGLRIRPNTESLAAHTTASVVTAITTVILVD 354

Query: 362 SLFAIFYFAIGI 373
           ++FA+    +G+
Sbjct: 355 AVFAVMLRNVGV 366


>gi|317401487|gb|EFV82119.1| integral membrane protein [Achromobacter xylosoxidans C54]
          Length = 377

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 180/367 (49%), Gaps = 11/367 (2%)

Query: 8   VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           V    G+W    ++E  + +   A         A  DL  I+ +DTIGA LI     +  
Sbjct: 21  VCHVGGDWSVLALAEPGEVERRRAAMAKATDAGARWDLQGISRLDTIGALLIWQAWGEKL 80

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +    S   + +F+ ++     K    +P+ ++           +G  +++   +  
Sbjct: 81  P--ERVRWSAGQQDVFTALATNKGGKQALPRPEPAW------GWLRALGGAVLQAGENGR 132

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +   +LG ++ +     +     +G    +  Q+Y  G   + +  L+ F+ G V++   
Sbjct: 133 ALLTMLGQLVLDLFGMLSRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 190

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL   GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  
Sbjct: 191 AQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 250

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+   + LI PR+ AL +++PLL +  +  AI+G  +       +    F        +
Sbjct: 251 MGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQVQLGVSAQWFLQSLPDAIS 310

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L N + G++K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+L+A+
Sbjct: 311 LTNYWIGILKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYAV 370

Query: 367 FYFAIGI 373
            + ++GI
Sbjct: 371 IFSSVGI 377


>gi|192359616|ref|YP_001982090.1| ABC-type transport system, permease [Cellvibrio japonicus Ueda107]
 gi|190685781|gb|ACE83459.1| ABC-type transport system, permease component [Cellvibrio japonicus
           Ueda107]
          Length = 375

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 168/366 (45%), Gaps = 12/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           +    GNW+     + A      +  S  + +  ++   +   D+  A  ++        
Sbjct: 22  ILCLYGNWQLGSAPDGATLCASLMAASGTTQTLQLNTDQLGTWDSSLAIALLQLARWCDT 81

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                 +    E L  L+                              + +      + +
Sbjct: 82  HQITLDIRAVPEGLQQLLRLATAIPPHQPSQSNDRHPWH---------QSLQDAWQGTRT 132

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G       ++     K +   ++    +   G   + +V LI+ + G ++A  G+
Sbjct: 133 TLIFIGDTSLALSQWVRGQAKTRRSDIAFF--IEQAGPRALAIVTLIALLVGMILAYLGS 190

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL Q GA+++  DL+++  +RE+G L+TAV++AGR+G+A  A++G+M++NEEIDA++TM
Sbjct: 191 VQLRQLGAQVYVADLVALGMVREMGALMTAVIMAGRTGAAYAAQLGTMQVNEEIDALKTM 250

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  +  L+ PR+ AL++ +PLL I AN   ++G ++V     D+ F  +  +       
Sbjct: 251 GISSIEFLVLPRLLALVLVMPLLCIYANVIGMVGGALVATS-MDVNFIQYILQTQGAVGW 309

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +I TGL+K+ F    I I   + G   G +S+++G   T  VV++I  +++ D+ F I 
Sbjct: 310 VDISTGLVKSVFFGVLIAIAGCQAGIHCGRNSDAVGMAATNAVVRAIVYLVVADAAFNIL 369

Query: 368 YFAIGI 373
           Y  +GI
Sbjct: 370 YDKLGI 375


>gi|139001578|dbj|BAF51698.1| putative innermembrane component of ABC transporter system
           [Sphingobium japonicum]
          Length = 316

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 174/323 (53%), Gaps = 9/323 (2%)

Query: 50  IDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +DTIGA ++   +++      + G     E+L + +              R      ++ 
Sbjct: 1   MDTIGAWVLHRAIKRLDCG--ITGDKCDAERLIATVGSVDE-----PVNIRPDHEPPWQR 53

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ +V             G  +  T        +F+    +++++   VGVS + 
Sbjct: 54  VVGQIGEAVVNSGTTLLGLLGFFGGTLVATWNVIRHPGRFRIN--AVVQRFEVVGVSALG 111

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ L+SF+ G VIAQQG+ QL QFG E+ +I+L+  L  RE+GVL+TA+M+AGRSGSA  
Sbjct: 112 IIGLMSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFA 171

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+MK+ EE+DA+RT+G+  +  L+ PR  A+++ +PLL   ++  AIIG   +    
Sbjct: 172 AQLGTMKLTEEVDAMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVS 231

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            DIP   F  R      + +++ GLIKAP     I +    +G  V  ++  +G + T  
Sbjct: 232 LDIPPITFVQRLREVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAA 291

Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372
           VVQ+I +VI+ID+ FA+F+  +G
Sbjct: 292 VVQAIFLVIVIDAFFAVFFTWVG 314


>gi|161523583|ref|YP_001578595.1| hypothetical protein Bmul_0403 [Burkholderia multivorans ATCC
           17616]
 gi|189351647|ref|YP_001947275.1| putative ABC transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|160341012|gb|ABX14098.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC
           17616]
 gi|189335669|dbj|BAG44739.1| putative ABC transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 374

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 11/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             R  G W +  ++     VV           +  DLS I  +D +G + +     +   
Sbjct: 19  TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALWRVWGRKLP 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                  +       ++     R   + + P+R         L    G  +  F      
Sbjct: 79  PGIALTATQ-----RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 129

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              + G VI +                     +Y  G   +P+  L++F+ G V++   A
Sbjct: 130 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M
Sbjct: 188 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     LI PR+ AL +++PLL +  N  A+ G ++       I    F         +
Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 307

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN++ GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI 
Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367

Query: 368 YFAIGI 373
           +  +G+
Sbjct: 368 FQNVGL 373


>gi|53724609|ref|YP_101915.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|52428032|gb|AAU48625.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
          Length = 355

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 11/365 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G W +  ++    +V   I +  +      DLS +  +D +G + +     +    
Sbjct: 1   MRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR--- 57

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                       L        ++  +    + S       +     G+ +  F       
Sbjct: 58  ------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLYGG 111

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             +LG +I +                 +   +Y  G   +P+  L++F+ G V++   A 
Sbjct: 112 IALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSAQ 169

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG
Sbjct: 170 QLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMG 229

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     +  PR+ AL +++PLL +  N  A+ G ++       I    F     S   +A
Sbjct: 230 IPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIA 289

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+F GL K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI +
Sbjct: 290 NLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILF 349

Query: 369 FAIGI 373
             +G+
Sbjct: 350 QNVGL 354


>gi|294506238|ref|YP_003570296.1| ABC transporter permease [Salinibacter ruber M8]
 gi|294342566|emb|CBH23344.1| ABC transporter, permease [Salinibacter ruber M8]
          Length = 371

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 13/364 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62
           +   V    G+W        A  V++    S    +   D S + + D+     +     
Sbjct: 9   DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68

Query: 63  --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
               +   +++  + T +E+L +L           +             L   +G   + 
Sbjct: 69  YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAED--------TALLARLGHWGLA 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +++ +    LG  + + G       + +    +    +     S +P+V +IS + G 
Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMR--WRTFGVALQESTASALPIVTVISLLVGL 178

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA  L +FGA+ F   L+S   LRE+G L+TA+++ GR+G+A  AE+GSM++NEE
Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T G+  +  L++PRI A++++LP+LT+ A+   I+G   V     D+    F + 
Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L++   G+ KA      IG+     G   G  ++++G+  T+ VV  I +++  
Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358

Query: 361 DSLF 364
           +++ 
Sbjct: 359 NAVI 362


>gi|220904331|ref|YP_002479643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868630|gb|ACL48965.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 375

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/367 (21%), Positives = 149/367 (40%), Gaps = 7/367 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                 G+W             +            ++   +   D+     ++  ++  +
Sbjct: 16  LRVSVGGSWNIDRAWPPEARTALESLTDQSIREVRLESDNLGVWDSSLLVFLVQLVQTAN 75

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            +      S     L   +    +          S       N    +G+  +       
Sbjct: 76  ERKANLHTS-----LPDGLERLLKLAFAVPAKAGSDRKKEELNFVQRVGQVAIDLPPRVT 130

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
              + +G V    G       + +     L+  M   GV  +P++ + S + G ++A  G
Sbjct: 131 DFLNFVGDVTLAVGRLFVGRTQMRPQ--DLLAAMQECGVQALPIISITSMLFGLILAFVG 188

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL+QFGA+I+   L+ I  LR +G ++  V++AGR G+A  A IG+M++NEE+DA+ T
Sbjct: 189 AVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMAGRVGAAYAALIGTMQVNEEVDALAT 248

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V  L+ PR+ AL   +PLLT+ A+   ++G  IV     +I    + +       
Sbjct: 249 LGIAPVDFLVLPRVVALTAMIPLLTLYADLMGVVGGYIVATTMLNINPMEYINATMQMVP 308

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++F GL         I +    +G   G  + ++G   TT VV +I  +I+  ++  +
Sbjct: 309 YKHVFIGLAYGTVFGVIIAMTGCYQGMRCGRSAQAVGLATTTAVVHAIVGIIVATAVITV 368

Query: 367 FYFAIGI 373
               + I
Sbjct: 369 ICNVLDI 375


>gi|317484538|ref|ZP_07943446.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6]
 gi|316924199|gb|EFV45377.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6]
          Length = 388

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 162/377 (42%), Gaps = 11/377 (2%)

Query: 2   SENGITVFRFAGNWKSPEISE-----IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE 56
           S  G+    F+G WK   +         + +        ++ S  +   A+ E D+ G  
Sbjct: 18  SSEGVLRVIFSGEWKRDLLGPNFFTERDEALRETERLLKEARSVELLGEALGEWDS-GVL 76

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
           ++     +     K   +     +L   I    +  +       +            +G 
Sbjct: 77  VVT---TRLVTLAKEHNIPLDDARLPEGIRNLTKLALAVPPNTAAQRKAQKTTFLERVGG 133

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             +     +C     +G ++ + G       +      +    +   GV  +P+V LIS 
Sbjct: 134 FTLAVPRMACDIFDFIGELVLSAGRLFRG--RSSCTPGNAWLAVQESGVDALPIVSLISL 191

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G ++A  G  QL  FGAEI+   L+++   R +G ++T +++AGR+G++  A IG+M+
Sbjct: 192 LVGLILAFVGVIQLKMFGAEIYVSSLVAVSMTRIMGAIMTGIILAGRTGASYAAVIGTMQ 251

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           +NEEIDA+ T+G+     LI PR+ AL    PLL + ++F  I+G  IV      +    
Sbjct: 252 VNEEIDALTTLGVAPSDYLIMPRVLALTAMTPLLVLYSDFMGIMGGFIVGVGILGLDPME 311

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +++       + N++ G++        I I    +G   G ++ ++GK  T+ VV SI  
Sbjct: 312 YYTFTQKGFNINNLWVGMVHGAVYGMLIAITGCYQGLRCGRNAEAVGKATTSAVVYSIVG 371

Query: 357 VIIIDSLFAIFYFAIGI 373
           +++  ++  I    + I
Sbjct: 372 IVLSTAVLTILCNILNI 388


>gi|183220168|ref|YP_001838164.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189910288|ref|YP_001961843.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774964|gb|ABZ93265.1| Membrane protein of an ABC transporter complex [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778590|gb|ABZ96888.1| ABC-type transport system, permease [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 374

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 167/343 (48%), Gaps = 8/343 (2%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90
           +       + I+  + + E DT G   +     +   +     +    ++    ++ T+ 
Sbjct: 40  LIGKNSPRNIIIFANQLKETDTSGISFLKLIRTECESRNIHFVLRELNDKFQYRLNITND 99

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
              K  +        S       IGK  +  + +        G +  +         K +
Sbjct: 100 DSKKYNEQLAVSLRKS-----EQIGKLTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIR 154

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                  R    +GV+  P++ +I F+ G +++ Q A  + +FGAEIF  +L+ +   RE
Sbjct: 155 --WKDSFRVAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFVANLVGLSLFRE 212

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G L+TA +++GRSGS+  AE+G+MK++EEIDA+ TMGL  V+ LI PR+ A +I  PLL
Sbjct: 213 LGPLMTAFILSGRSGSSFAAELGTMKVSEEIDALTTMGLPPVQFLIIPRLVASLIVTPLL 272

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           TI+ N   +IG ++V+  +   P   F ++ +    L++I  GL+K+ F    I  +   
Sbjct: 273 TIVFNLFGLIGGAVVLVSFG-FPLITFVNQVNIAVGLSDILGGLLKSYFFGMIIASIGCY 331

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            G      + ++G+  T+ VV SI +V I+D +F++ +F + I
Sbjct: 332 RGLKTASGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI 374


>gi|154173911|ref|YP_001408228.1| stas domain-containing protein [Campylobacter curvus 525.92]
 gi|112802195|gb|EAT99539.1| stas domain protein [Campylobacter curvus 525.92]
          Length = 368

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 14/372 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+T F+F G +   +   + + +           S   D   +  +D     +++  
Sbjct: 11  AASGVTSFKFIGKFTYKDAKILQNTLSRIAKAR---GSLRFDFLQLLHVDYA---VLILV 64

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                GK      S    +    +            PQ         N    +G+KI   
Sbjct: 65  KNAIKGKKAEFVTSDTKIKAMISLLDDESIDFSYIPPQNK------LNFFARLGEKICDG 118

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +       LG  +  T +   +    +  L      +   GV+ V +V L +F+ G V
Sbjct: 119 FKNLLEFGSFLGEFLIKTIKIFVNPMSLR--LREFSNYIKDGGVNAVFIVSLTAFLIGVV 176

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G+  L+ FGA IF +++M +L LRE+  L+ A+++AGRS S+  A+IG+MK+ EEI
Sbjct: 177 LAYLGSAMLANFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTEEI 236

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++TMG +    L+ PRI A+++SLP++  +A+  +I+G  ++     DI FA + SRF
Sbjct: 237 DAMKTMGFEPFNFLVLPRIIAMVLSLPIIIFIADAISILGQMLICQGVLDISFADYLSRF 296

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +   G+IKAPF    I I+    GF V  ++ SLG+  T  VV +I  VI +D
Sbjct: 297 KDMVELRHFAVGMIKAPFFGAIIAIIGCMRGFDVNSNAQSLGEMTTISVVNAIFWVIALD 356

Query: 362 SLFAIFYFAIGI 373
           + FAI +  + I
Sbjct: 357 AFFAIIFMWLKI 368


>gi|83814459|ref|YP_444490.1| ABC transporter, permease [Salinibacter ruber DSM 13855]
 gi|83755853|gb|ABC43966.1| ABC transporter, permease [Salinibacter ruber DSM 13855]
          Length = 371

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 13/364 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62
           +   V    G+W        A  V++    S    +   D S + + D+     +     
Sbjct: 9   DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68

Query: 63  --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
               +   +++  + T +E+L +L           +             L   +G   + 
Sbjct: 69  YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAAD--------TALLARLGHWGLA 120

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +++ +    LG  + + G       + +    +    +     S +P+V +IS + G 
Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMR--WRTFGVALQESTASALPIVTVISLLVGL 178

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A  GA  L +FGA+ F   L+S   LRE+G L+TA+++ GR+G+A  AE+GSM++NEE
Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T G+  +  L++PRI A++++LP+LT+ A+   I+G   V     D+    F + 
Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L++   G+ KA      IG+     G   G  ++++G+  T+ VV  I +++  
Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358

Query: 361 DSLF 364
           +++ 
Sbjct: 359 NAII 362


>gi|254000132|ref|YP_003052195.1| hypothetical protein Msip34_2431 [Methylovorus sp. SIP3-4]
 gi|313202095|ref|YP_004040753.1| hypothetical protein MPQ_2372 [Methylovorus sp. MP688]
 gi|253986811|gb|ACT51668.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4]
 gi|312441411|gb|ADQ85517.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 371

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 11/369 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R  G W    +     ++  A+           DL A  ++DT GA +++   E 
Sbjct: 14  GRRRVRLLGQWSLRALDNDFAELKQALQPFFSDPFTQWDLLATEQLDTAGATILLNGWE- 72

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                    V+     LF+ +           +   +F            G+ ++KF   
Sbjct: 73  -GKLDARMQVTEEQRALFTTLQGLRVPARTGSQFDWAFP-------LVATGELVMKFAQH 124

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 ++GL++            F       +  +Y  GV+ +PV  L+ F+ G  ++ 
Sbjct: 125 LTDFVQLIGLLLLEMLYLVRRPSAFP--WREFMANIYKSGVTALPVTGLLGFMIGVAMSY 182

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             + QL  FGA+IF ++++ +  +RE+G +L A+++AGRSGSA+ A+IG M++ EEIDA+
Sbjct: 183 LMSSQLRTFGADIFIVNILGLSMIRELGPILMAILVAGRSGSAMTAQIGVMRVTEEIDAL 242

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG+  +  ++ P++  L    P L +  +F  + G ++       + F  FF      
Sbjct: 243 TTMGVSRILRIVLPKVLGLTFVAPFLVLWTSFWGLAGGALSANTELGLSFRFFFDYLPMV 302

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               N+   L K       + +VA   G  +  ++ SL    T+ VV +I+ VI++D+ F
Sbjct: 303 VEPVNLTLSLFKGLLFGFVVTLVACHFGLRIMPNTESLSASTTSSVVTAITSVILLDAAF 362

Query: 365 AIFYFAIGI 373
           AI    IG+
Sbjct: 363 AILTSGIGV 371


>gi|224418846|ref|ZP_03656852.1| toluene ABC transporter permease [Helicobacter canadensis MIT
           98-5491]
          Length = 375

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 8/370 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +N I + + +G W           ++   +  + +    ++L+   ++D  G E++  ++
Sbjct: 13  DNDIYILKLSGLWD---YKIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERWI 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                K     V  +  +  S      +     + P +      F  LH+   + I  F 
Sbjct: 70  LALESKNI---VLENALKNHSKSQQIFQILATRKNPLKQDMVQDFIKLHWDSFQIIKGFF 126

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            DS       G ++             +  L + +  +    V  + +V L  F+ G VI
Sbjct: 127 KDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFLIGIVI 184

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG+ QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AEIG M+  +EID
Sbjct: 185 AYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEID 244

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG D +  L+ PR+ AL + LPL+  +A+   ++GA +V      I    F  RF 
Sbjct: 245 AMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQFVERFL 304

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + + + G+ KAPF    I  V    GF V   + S+G   T  VV+SI +VI  D+
Sbjct: 305 QVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLVIAFDA 364

Query: 363 LFAIFYFAIG 372
           L ++ +  +G
Sbjct: 365 LCSVVFTEMG 374


>gi|311109431|ref|YP_003982284.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8]
 gi|310764120|gb|ADP19569.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8]
          Length = 354

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 175/363 (48%), Gaps = 11/363 (3%)

Query: 12  AGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
           AG+W    ++E  +               A  DL  I  +DTIGA LI       H   +
Sbjct: 2   AGDWSVLALAEPGEVQRRREALACATDGGARWDLHGIGRLDTIGALLIWEAWG--HKLPE 59

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130
               S   + +F+ ++    +       +  + +         +G+ I + I++  +   
Sbjct: 60  RVRWSAGQQDVFNALAMNKGETPAAAPKRDPWSWPR------AVGEAIFQAIDNGRALLV 113

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +LG ++ + G          G    +  Q+Y  G   + +  L+ F+ G V++   A QL
Sbjct: 114 MLGQLVLDFGGMLRRPR--LGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSAQQL 171

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
              GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+  MG+ 
Sbjct: 172 QMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVMGIS 231

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
             + LI PR+ AL +++PLL +  +  AI+G  +       +    F        +L N 
Sbjct: 232 HGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLQSLPDAISLTNY 291

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + G++K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+ +A+ + +
Sbjct: 292 WIGILKGVTFGMLIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAFYAVIFSS 351

Query: 371 IGI 373
           +GI
Sbjct: 352 VGI 354


>gi|300114239|ref|YP_003760814.1| hypothetical protein Nwat_1606 [Nitrosococcus watsonii C-113]
 gi|299540176|gb|ADJ28493.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113]
          Length = 376

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/366 (31%), Positives = 192/366 (52%), Gaps = 6/366 (1%)

Query: 9   FRFAGNWKSPEISEIADDVV--MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
               G+W     +E+   +    A  +   + +A V+LS +  +DT GA L++  +    
Sbjct: 14  LHVIGDWTLEYYAELQSRIDVFKAQAEKNNTLNATVELSGLNRLDTAGAVLLVELLGAER 73

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
               ++  S       +L+    R       PQR    +    L    G++I  F     
Sbjct: 74  LAAFVKEGSGLTPARRALLDAVVRTMSMPLAPQRQAR-SPLVALLAGTGERIELFWRQQL 132

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                +GL++ +         +++  L +L+ Q+   G++ + +V L++F+ GAV+A  G
Sbjct: 133 LLLGFIGLILGSLTATFWRPNRWR--LTALVAQIQQTGLNAIGIVALLTFLVGAVVAFLG 190

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A  L  FGA I+++DL++   LRE GVLL A+++AGR+ SA  A+IGSMK NEEIDA+RT
Sbjct: 191 ATVLQNFGATIYTVDLIAFSFLREFGVLLAAILLAGRTASAFTAQIGSMKANEEIDALRT 250

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL    +L+ PR+ AL++SLP+LT +   S ++G  +V     DI    F +      +
Sbjct: 251 LGLSTAELLVLPRVLALLLSLPILTFIGMLSGMLGGGLVCLVVLDISALQFVTILQG-IS 309

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +   GL KAP  A  I  +   EGF V   + S+G+  T+ VVQSI +VI++D++ A+
Sbjct: 310 LKHFLVGLSKAPIFAFFIAAIGCLEGFKVSGSAQSVGEHTTSSVVQSIFMVILLDAIAAL 369

Query: 367 FYFAIG 372
           F+  +G
Sbjct: 370 FFMEMG 375


>gi|253828165|ref|ZP_04871050.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491]
 gi|313142364|ref|ZP_07804557.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
 gi|253511571|gb|EES90230.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491]
 gi|313131395|gb|EFR49012.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
          Length = 371

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 8/370 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +N I + + +G W           ++   +  + +    ++L+   ++D  G E++  ++
Sbjct: 9   DNDIYILKLSGLWD---YKIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERWI 65

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                K     V  +  +  S      +     + P +      F  LH+   + I  F 
Sbjct: 66  LALESKNI---VLENALKNHSKSQQIFQILATRKNPLKQDMVQDFIKLHWDSFQIIKGFF 122

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            DS       G ++             +  L + +  +    V  + +V L  F+ G VI
Sbjct: 123 KDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFLIGIVI 180

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG+ QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AEIG M+  +EID
Sbjct: 181 AYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEID 240

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG D +  L+ PR+ AL + LPL+  +A+   ++GA +V      I    F  RF 
Sbjct: 241 AMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQFVERFL 300

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               + + + G+ KAPF    I  V    GF V   + S+G   T  VV+SI +VI  D+
Sbjct: 301 QVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLVIAFDA 360

Query: 363 LFAIFYFAIG 372
           L ++ +  +G
Sbjct: 361 LCSVVFTEMG 370


>gi|254284160|ref|ZP_04959128.1| ABC transporter permease protein [gamma proteobacterium NOR51-B]
 gi|219680363|gb|EED36712.1| ABC transporter permease protein [gamma proteobacterium NOR51-B]
          Length = 377

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 170/373 (45%), Gaps = 15/373 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G+W+S  +     ++           +  VD   +   D+    L++   
Sbjct: 18  DDCHHSLILKGSWESSAVLP---ELGALFQPDDTVTALRVDALEVARWDSRLISLLLKLH 74

Query: 63  E--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
              +  G      +     QL +L            +        +       +G ++  
Sbjct: 75  RYCESRGISITTELPEGASQLLALAVAVPPAVESPSQSAGWLHSLNPLPYLERLGARVTD 134

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F+N   S     G V++          + +  +  L+   Y  G + +P++ L S + G 
Sbjct: 135 FLNFVGSLVSSTGRVVTG---------RGRVRVSDLLAFAYQTGPNALPIIGLTSLLVGM 185

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++   GA QL QFGA IF  DL++I  LRE+G L+TA++IAGR+G+A  A++G+M++NEE
Sbjct: 186 ILGYLGAVQLQQFGAGIFVADLVTIGVLREMGALMTAIIIAGRTGAAYAAQLGTMRVNEE 245

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DAI  +G+  +  L+ PR+ A+ + +PLL++ A    I+G  IV      I    ++++
Sbjct: 246 VDAIEILGISLMDFLVLPRVLAVTLMVPLLSLYAAIMGIVGGGIVS-ISLGITPLQYWTQ 304

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             ++  L ++  GL KA      IGI   + G   G  S  +GK  TT VV ++  +I+ 
Sbjct: 305 AQTSLGLDHLLVGLSKALLFGALIGIAGCRAGMQSGRSSEGVGKATTTAVVVALVYLILA 364

Query: 361 DSLFAIFYFAIGI 373
           D+   +    +GI
Sbjct: 365 DAAVNLLCQLLGI 377


>gi|223940090|ref|ZP_03631954.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223891275|gb|EEF57772.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 399

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 174/364 (47%), Gaps = 8/364 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               V R +G   +     +   +  A+       +  V+++ +T  D+ G   +    +
Sbjct: 38  ENRFVLRLSGRLDADSTPFLWQRLQSAL-VVPPGATLEVNVAPLTYSDSAGFAFLYLLSK 96

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                     ++    +    +     + ++  + ++    +    L   IG  ++    
Sbjct: 97  GCMTPQSQVSLNGLKPEYQKALQNYSMEDVQAYQGEQPVRQS----LMDEIGMAVIAKTL 152

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +   +   +G VIS  G         +     ++R     G + +P+V LIS + G VIA
Sbjct: 153 EVRQKVIFVGDVISGLGYVLTHPRWMRRN--EIVRIFETAGANALPIVSLISLLLGLVIA 210

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            + A   ++FGA+I+  +L+ ++ +RE+  ++TA+++AGRSGSA  AE+G+MK+NEE++A
Sbjct: 211 FEAAQPFARFGAKIYIANLIGLIMVRELSPVMTAILLAGRSGSAFAAELGTMKVNEELNA 270

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + T+GLD +R L+  RI A ++  PLLTI +  + ++G  +V+      P ++ + +  S
Sbjct: 271 LETIGLDPMRFLVVQRILASLLLTPLLTIYSMATGVLGGVLVM-LGLGFPLSIAWHQLQS 329

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +  + +I  G++KA      +   A   G        ++G+  T  VV  I ++II DS+
Sbjct: 330 SVRINDIAFGILKAFVFGGIVAGTACLRGLETKSGPAAVGESTTRSVVSGILLIIIADSV 389

Query: 364 FAIF 367
           FAI 
Sbjct: 390 FAIL 393


>gi|328954039|ref|YP_004371373.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454363|gb|AEB10192.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 377

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 91/375 (24%), Positives = 168/375 (44%), Gaps = 12/375 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S         +G+W        AD V   +  S+   + + D   +   DT     +M  
Sbjct: 12  SSADTLKVMISGDWLLGGELPAADRVQQRLEGSLGVRNLVFDTRELAHWDTGLLTFLMSL 71

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                + +  +   G+    ++L  L S          + + +       +    +G + 
Sbjct: 72  ATFCSQQNIYLDRDGLPPGAKRLLELASAV-------PEKKDAHKVEERLSFLAFLGNET 124

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           V F   +      +G  +           +++   L LI Q   VGV  +P+V LI F+ 
Sbjct: 125 VNFFQSAGELLEFIGDAVIAVLRLIRGQAQYRRADLGLIMQA--VGVQALPIVSLICFLV 182

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G ++A  GA QL  FGA+I+  DL+ I  +R +  ++T +++AGR+G A  A++G+M++N
Sbjct: 183 GLILAFIGAIQLKLFGAQIYVADLVGIAMVRLMAAIMTGIVMAGRTGGAFAAQLGTMQVN 242

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           +EIDA++T+G+  +  L+ PR+ AL + +PLL + AN   I+G   V      I F  ++
Sbjct: 243 QEIDALKTLGISPMEFLVLPRMLALALMMPLLCLYANVMGILGGMAVGVGMLGIGFIQYY 302

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++  +   L N+  GL         + +     G   G  ++++G   T+ VV +I  +I
Sbjct: 303 NQTAAAVGLWNLGIGLFSGTVFGVIVALAGCMRGMQCGRSASAVGDAATSAVVTAIVGII 362

Query: 359 IIDSLFAIFYFAIGI 373
           +  +   I    +GI
Sbjct: 363 VSTAAITILCNFLGI 377


>gi|145589257|ref|YP_001155854.1| hypothetical protein Pnuc_1074 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047663|gb|ABP34290.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 393

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 8/367 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           + V+   G W     ++ A  +  +   +  + S   D++ +  +D  G   I+   E  
Sbjct: 34  VNVYTLGGVWTQVRAAQDA-WLHSSSTVNSAAKSLTCDVTKVETLDGAGIAFIIALQEAQ 92

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                   +    E+   L+            P         +    +IG      I DS
Sbjct: 93  TVAGGNFELIGLAERYQPLLKEFDPISNLFPAP----VAKPQRGFVTNIGMGTANLIKDS 148

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 LG + S+      +    +      +      G++ +P++ L++F+ G +++ Q
Sbjct: 149 KGLITFLGHLGSDLVWSVRNLKHVR--WGDFVNAAVEAGINALPIIGLVAFLIGVILSFQ 206

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A  + QFGA  F   L ++  +RE+G L+TA+++AGRS +A  AEIG+M +N E+DA+ 
Sbjct: 207 AAIGMKQFGAVSFVGPLAALGIVREMGPLITAILLAGRSSAAFAAEIGTMTVNSEVDALV 266

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           + GL  +R L+ PR+ A I+  P+LT+ A+  +I  + +     Y IPF  F++   S  
Sbjct: 267 SGGLSPMRFLVVPRVLAGILVAPILTLFADIVSIFASML-TMLIYGIPFINFYNGMLSAV 325

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + ++ +GLIKA      +  V    G   G  + ++G   T  VV SI +++I+D +FA
Sbjct: 326 DVEDVTSGLIKATLFGVVVSAVGCLRGMQTGNGAAAVGISATRAVVSSIVMIVIVDGIFA 385

Query: 366 IFYFAIG 372
              +  G
Sbjct: 386 FISYKTG 392


>gi|73539807|ref|YP_294327.1| hypothetical protein Reut_A0101 [Ralstonia eutropha JMP134]
 gi|72117220|gb|AAZ59483.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134]
          Length = 357

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 14/368 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKS---IQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +  G+W +  ++       M           D A   L+ + ++D IG +L+       
Sbjct: 1   MQLCGDWTALGLAGCHQARAMRSRLHELCQTPDDAHWSLAGVDKLDHIGGQLLWQAW--- 57

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
                  G                 +                 N     G  ++ F   +
Sbjct: 58  ------DGKLPQRLDASEGQRRVFERIADLHADGWRKHIVERFNPITLFGASVLSFCAQA 111

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +   +LG +  +   F       +G    +   +Y +G   + +  L+ F+ G V++  
Sbjct: 112 ANGVSMLGQLTFDLIRFARMPQ--RGPWREISANIYNIGYKALGITALVGFLIGIVLSYL 169

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL  FGA  F ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R
Sbjct: 170 SANQLRTFGASTFIVNILGMAVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAMR 229

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+     LI PR+ AL + +PLL    +  A+ G  I       I    F        
Sbjct: 230 VMGISHGFRLIMPRVIALAVCMPLLVAWTDVLALAGGIIAARMQLGISPTFFLRALPDAV 289

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +AN++ GL K       IG+ A   G  +  ++ SLG+  T  VV SI+IVI+ D++FA
Sbjct: 290 PVANLWLGLGKGVAFGILIGLAACHFGLRIKPNTQSLGEGTTASVVVSITIVIVADAIFA 349

Query: 366 IFYFAIGI 373
           + +  +G+
Sbjct: 350 VMFKDVGL 357


>gi|218961389|ref|YP_001741164.1| transporter, putative (modular protein) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730046|emb|CAO80958.1| transporter, putative (modular protein) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 358

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 170/364 (46%), Gaps = 16/364 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           +    G+  +  + E   +V   +     +    +DLS I  +D+ G   +     +   
Sbjct: 9   ILYLEGSLNAETVPETFIEVNSLLKHQSPN---TIDLSNINVLDSAGVAFLDELNTRLSA 65

Query: 68  KIKL--QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           +  L  QG +  I+++    S    K    ++                IG  +V    + 
Sbjct: 66  EGILLFQGATPEIQEVIDSFSSLKIKVPAPERK---------MGFFEKIGDSLVLAGQNF 116

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +   +   V            +      S   Q   +G   +P++ L+SF+ G +++ Q
Sbjct: 117 YNVMLLASEVFY--WAVIGIFSRKGQRKGSFTIQCSLLGSQALPILSLLSFIVGFILSLQ 174

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            + QL+ FGA +F  DLM+   +REI  L+TA+++AGRSGSAI +EI +M++ EEIDA++
Sbjct: 175 ASVQLANFGANVFIADLMAFAMVREIAPLITAIIVAGRSGSAIASEIATMQVTEEIDALK 234

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           TM L  VR ++ P+  A+ + +P+L + +   + IG  ++   Y D+    F  R  +  
Sbjct: 235 TMALSPVRYVVVPKFHAITVVMPILVMFSILVSEIGGGLIAIDYLDLSVYTFVQRSINVL 294

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           TL ++ T   K+   A  I I+    GF V   +  +GK  T+ VV SI  VII D++F+
Sbjct: 295 TLKDLVTSFGKSVIFAWTIVIIGAYCGFQVKGGAEGVGKATTSSVVASIFAVIIWDAIFS 354

Query: 366 IFYF 369
           + Y 
Sbjct: 355 LLYL 358


>gi|330818440|ref|YP_004362145.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3]
 gi|327370833|gb|AEA62189.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3]
          Length = 395

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 99/391 (25%), Positives = 180/391 (46%), Gaps = 32/391 (8%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS---------------------AIV 42
               + R +G W +  ++     VV  ++K  +  +                     +  
Sbjct: 15  GDGKIVRLSGQWTALALARDRGVVVRRVHKLARGPARAGGRMPALGAGSAAAQGGPVSRW 74

Query: 43  DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
           DLSAI  +D +G + +       H   +   ++ +   +F  I      + + +   R  
Sbjct: 75  DLSAIDRLDHVGGQALWRVWG--HRLPEGLTLTDNQRTIFERIQRLDEAREEPEPVIR-- 130

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
                 +    +G  +++F         + G VI + G               +   +Y 
Sbjct: 131 -----HDPVTRLGLALMQFGEHLFGGIAMFGRVILDLGSIARRPKTMP--WTEISANVYN 183

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G   +P+  L++F+ G V++   A QL QFGA  + ++++ +  +RE+G +L A+++AG
Sbjct: 184 AGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLAAILVAG 243

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSAI A+IG M++ EE+DA+R MG+     ++ PR+ AL +++PLL +  N  A+ G 
Sbjct: 244 RSGSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGG 303

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           ++       I    F         +AN++ GL K       I +V    GF +  +S SL
Sbjct: 304 ALAAKLALGIDVNFFIRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSL 363

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           G+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 364 GEGTTTSVVTSITVVILADAVFAILFQNVGL 394


>gi|329851286|ref|ZP_08266043.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19]
 gi|328840132|gb|EGF89704.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19]
          Length = 363

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 9/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  GNW    I  +++ +  A+          VD S I  +DT GA L+   +     +
Sbjct: 2   LRPKGNWIVTRIEGLSERLRQALKSY---QQITVDGSQIEALDTAGAYLLRTAVGD-RLQ 57

Query: 69  IKLQGVSTHIEQLFSLISFTHRKK---IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
            ++     +  +L+ ++           +        + + F      +GK   +F    
Sbjct: 58  GEVFAGQDNFARLYGIVGNHAAPISNYAQENPEPPKMWLHPFYFGLVKLGKLAERFKTGF 117

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +QA  +G +I+      A     +    +L+  M   G+  +P+V++ SF  GAV+   
Sbjct: 118 IAQAVFMGHIIAQLMISIAKPGSMR--WAALVNVMQRAGIEAIPIVLMTSFFIGAVLGFI 175

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G  QL+QFG+ IF++D++++  LRE   L+TAV++AGRS SA  AE+G+MK+N+EIDA+R
Sbjct: 176 GVLQLNQFGSGIFAVDMVAMFALREFAPLVTAVLLAGRSASAFAAEVGAMKMNQEIDAMR 235

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+D    LI PR+  L++    +T L+    + G  + IW       +VF  R     
Sbjct: 236 VMGIDPYEALILPRLIGLVLMSTFITFLSTLGMMFGGMLAIWSALGAGPSVFLQRVQDYV 295

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              N F G+++ PF A  I IV   +G  V     SLG++VTT VVQSI +V ++D+LFA
Sbjct: 296 PFYNFFVGIVRPPFFAATIAIVGCWQGMQVKDDVLSLGRQVTTAVVQSIFLVFMLDALFA 355

Query: 366 IFYFA 370
           I +  
Sbjct: 356 ILFNG 360


>gi|257092687|ref|YP_003166328.1| hypothetical protein CAP2UW1_1065 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045211|gb|ACV34399.1| protein of unknown function DUF140 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 370

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 172/367 (46%), Gaps = 13/367 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              + AG+W    + +        + + + S  A  DL +I  +D+  A ++     +  
Sbjct: 15  LQVQLAGDWTLATLPQPISRFEARL-RELASREAAWDLLSIARLDSAAAVVLWRSWGRRW 73

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
                  +S     L   +             +  +            G+  +  +++  
Sbjct: 74  PASLA--LSGEHRLLLERVEAIPADLPARPSERLGWLLVP--------GRLALAAVDNLA 123

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
               ++G ++ + G  CA               +Y  G   +PV  LI F+ G V++   
Sbjct: 124 GMVALVGQMVLDVGHLCAHPRDIP--WREFSANLYKSGAQALPVTALIGFLIGIVLSYLS 181

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A QL  FGA++F ++L+ I  +RE+G +L AV++AGRSGSA+ A++G M++ EEIDA+ T
Sbjct: 182 ALQLKTFGADVFIVNLLGISIVRELGPVLVAVLVAGRSGSAMTAQLGVMRVTEEIDALAT 241

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG+     L+ P+I AL +++PLL +  + + I+G  I      D+ +  F         
Sbjct: 242 MGVSRSLRLVLPKIIALAVAMPLLVVWCSAAGIVGGMIAARLQMDLSYGFFIDTLPRVVP 301

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +AN++ G+ K       IG+VA   G  V  ++ SL  + TT VV SI++ I++D++FAI
Sbjct: 302 VANLWIGMSKGLVFGMLIGLVACHFGLRVKPNTESLSSQTTTSVVTSITVAILVDAVFAI 361

Query: 367 FYFAIGI 373
              + GI
Sbjct: 362 MTRSFGI 368


>gi|325527206|gb|EGD04595.1| putative ABC transporter permease [Burkholderia sp. TJI49]
          Length = 351

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 97/361 (26%), Positives = 166/361 (45%), Gaps = 11/361 (3%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G W +  ++     VV           +  DLS I  +D +G + +     +        
Sbjct: 1   GQWTALALARNRGAVVRRAESVATGRVSEWDLSGIGRLDHVGGQALWRVWGRKLPAGIAL 60

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132
             +       ++     R   + + P+R    +    L    G  +  F         + 
Sbjct: 61  TATQ-----RTIFERIERLDSQREAPERIVRVDPVTRL----GLMLFAFAEHLQGGIAMF 111

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G VI +                     +Y  G   +P+  L++F+ G V++   A QL  
Sbjct: 112 GRVILDALSVLRRPQTMP--WKETSANIYSAGTQALPITALVAFLIGIVLSYLSAQQLQM 169

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+   
Sbjct: 170 FGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHG 229

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             LI PR+ AL I++PLL +  N  A+ G ++       I    F         +AN++ 
Sbjct: 230 LRLILPRVLALGIAMPLLVMWTNIIALTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYI 289

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+ K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI +  +G
Sbjct: 290 GIGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVG 349

Query: 373 I 373
           +
Sbjct: 350 L 350


>gi|209521691|ref|ZP_03270381.1| protein of unknown function DUF140 [Burkholderia sp. H160]
 gi|209497882|gb|EDZ98047.1| protein of unknown function DUF140 [Burkholderia sp. H160]
          Length = 388

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 175/369 (47%), Gaps = 14/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + R +G W +  ++   +    + +    +        DLS +  +D +G + +     +
Sbjct: 31  IVRLSGQWTALALARDRETGHVIPLLRALTGAQGIGEWDLSGVDRMDHVGGQALWRVWGR 90

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                    ++     +F  I+     +   +         S  +    +G  I  F++ 
Sbjct: 91  KMPPG--TALTDTQRDIFERIALLDTVRESAEPV-------SRIDPFTRLGLGIFSFLDH 141

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG V+ +                 +   +Y  G   +P+  L++F+ G V++ 
Sbjct: 142 MQGGVTMLGRVVLDLLAIARKPKLTP--WTEISANIYNAGARALPITALVAFLIGIVLSY 199

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FGA  F ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+
Sbjct: 200 LSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAM 259

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG+     LI PR+ AL +++PLL +  N  ++ G ++       I  + F  +  S 
Sbjct: 260 RVMGIPHGLRLILPRVVALAVAMPLLVMWTNVISLTGGALAAKLVLGIEMSFFARQLPSV 319

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D++F
Sbjct: 320 VPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAVF 379

Query: 365 AIFYFAIGI 373
           AI +  +G+
Sbjct: 380 AILFQNVGL 388


>gi|85860995|ref|YP_463197.1| ABC transporter permease [Syntrophus aciditrophicus SB]
 gi|85724086|gb|ABC79029.1| ABC transporter permease protein [Syntrophus aciditrophicus SB]
          Length = 381

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 160/369 (43%), Gaps = 6/369 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
              V R +G+W +      A+++  A+++ I +   I D+  +   D+     +    + 
Sbjct: 19  DALVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSGLLIFLAKVFDI 78

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
             G       S     +  L+          ++        S  +    +    + F   
Sbjct: 79  CRGNGISVDSSGLPPGVCRLLELAS----PEKQRSGVTREKSPPSFLVRVADATLDFGRG 134

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G    +          F+     LI  +   G   +P+V LIS + G ++A 
Sbjct: 135 FKDMLAFVGDATLSVLRMLRGKPGFRR--SDLILILQETGAQALPIVSLISLLVGMILAF 192

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FG +I+  D++ I  +R +G ++T +++AGR+G+A  A++G M++NEEIDA+
Sbjct: 193 VAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQLGMMQVNEEIDAL 252

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+  V  L+ PR+ AL++ +PLL I ++   ++G  IV     D+    ++    + 
Sbjct: 253 EVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEYYHETVNA 312

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +L   + GL  +      + +     G     +++++G   T+ VV  I  +++  ++ 
Sbjct: 313 VSLTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSIVVATAII 372

Query: 365 AIFYFAIGI 373
            +    +GI
Sbjct: 373 TLLCQVLGI 381


>gi|114328116|ref|YP_745273.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316290|gb|ABI62350.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 392

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 166/372 (44%), Gaps = 10/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE  +     +G W           +       + ++  ++D+SA+   D+     +   
Sbjct: 31  SEGMVATLSLSGEWTVASGGLNTRPINAF---PVGTERLLIDVSALQRWDSALISFLWSL 87

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++ +        ST       L++        +       F          IG   +  
Sbjct: 88  EQRCNTSGITLDNSTLPHSARGLLALLPEHPHPSAPAPAKHFAP-----VQAIGASTLSM 142

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + +  +   +    +   G      +  +     L+R +   G S + +V +++F+ G++
Sbjct: 143 LTECGTVTELGVETLRGAGATLFGGHGMR--WRDLLRDISDAGPSALLIVGIVNFLMGSI 200

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA QL +F A+I+  +L+ +  +RE+  ++TA+++AGR+G A  A I +M  NEEI
Sbjct: 201 LAFVGAVQLRKFAADIYVANLVGLASVREMSAVMTAIIMAGRTGGAYAARIATMTGNEEI 260

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R  G+   R L+ P I AL++++P+L + A   +++G  IV     D+  A F++  
Sbjct: 261 DALRVFGIPVSRYLLLPSIAALVLTMPILYLYACLISLVGGYIVSQGMLDVTMAGFWNHL 320

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
             +  +     G +K    A  IG+V+ + G   G  +  +G   T  VV  I  VI +D
Sbjct: 321 FGSVHIDQFVFGFVKTITFAMLIGLVSCRIGLKAGRSAADVGVAATRAVVSGIVGVIALD 380

Query: 362 SLFAIFYFAIGI 373
           S+FA+    IGI
Sbjct: 381 SMFAVLATIIGI 392


>gi|78357028|ref|YP_388477.1| ABC transporter permease [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219433|gb|ABB38782.1| ABC transporter permease protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 373

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 164/369 (44%), Gaps = 7/369 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V  F G W   +       + + +    +  +     + +T  D+         +E 
Sbjct: 12  GRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLET 71

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
             G+      S   + +  L+S   +        +     +    L   +G+ +      
Sbjct: 72  LEGRGIAYDTSGLPDGVLRLLSLAAQV-----PEREGAAVSRKSPLSARMGEALHAAFAG 126

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + S    +G V  +    C     F+         + + G   +P+V LIS + G + A 
Sbjct: 127 TISVMEFIGDVTLSVLRMCIGRAVFR--WSDTFALLRFCGAQSLPIVSLISMLAGLIFAF 184

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            GA QL  FGAEI+   L+ I  LR +G ++TA++++GR G+A  AE+G+M++NEEIDA 
Sbjct: 185 VGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEEIDAF 244

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T G+  +  L+ PR+ AL++ +PLL + AN   I+G + V W   DI    +F+    T
Sbjct: 245 STFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNMTWQT 304

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +L +   G+  +      + + +   G   G  ++++GK  T+ VV SI  +++  ++ 
Sbjct: 305 VSLTHFGVGIAHSVVFGFVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVATAVI 364

Query: 365 AIFYFAIGI 373
                 +GI
Sbjct: 365 TFLCNILGI 373


>gi|327399071|ref|YP_004339940.1| hypothetical protein Hipma_0911 [Hippea maritima DSM 10411]
 gi|327181700|gb|AEA33881.1| protein of unknown function DUF140 [Hippea maritima DSM 10411]
          Length = 349

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 184/365 (50%), Gaps = 25/365 (6%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G      +S++   +            AI+D+   +++DT     +     K    
Sbjct: 10  LLVSGELTFNNLSKLITKINE-------CKPAIIDVRGASKLDTSSLVYLASLNIKLLLN 62

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
              Q          SL++   +   + +K + S      +   Y +G   V+ + +    
Sbjct: 63  KNDQ----------SLLNIVLQHIPEKKKKKDS------RGFLYSLGYAFVERLKELYVF 106

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG V      F  +  +F+  L S ++ +  +G + +P++  ISF+ GAVIA  G+ 
Sbjct: 107 MSFLGEVFVGFIGFILNPKRFR--LKSTLKDVELMGFNAIPILTTISFLIGAVIAYHGSV 164

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           +L QFGA IF +DL+SI  LRE+G L+ A+++AGRS S+  A+IG MK+ EE+D I+TMG
Sbjct: 165 RLKQFGANIFVVDLVSISVLRELGPLIVAILLAGRSSSSYTAQIGIMKVTEEVDVIKTMG 224

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++   IL+ P+I ++++ +PLL +LA+   ++G  +V     +I    F  R H    + 
Sbjct: 225 VNPYDILVFPKIVSMLVCVPLLIVLADVMGVLGGMVVAHLSLNITVRDFILRLHQAIGIK 284

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
              +G++KAP  A  I  +   +GF    +  S+GK VT  VV SI  VII D++F++ +
Sbjct: 285 TFVSGILKAPAFAFLIATIGAFKGFQTKKNVESIGKSVTVSVVDSIFGVIIADAIFSVLF 344

Query: 369 FAIGI 373
             +GI
Sbjct: 345 RWMGI 349


>gi|293602529|ref|ZP_06684975.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292819291|gb|EFF78326.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 383

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 176/370 (47%), Gaps = 11/370 (2%)

Query: 5   GITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
              V   AG+W    +++  + +   A            DL  I+ +DTIGA LI     
Sbjct: 24  DGKVCHVAGDWSVLALAQAGEVERRRAAMAQAAEQGMRWDLHGISRLDTIGALLIWQAWG 83

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +    S   + +F+ ++    +         +F           +G  I++   
Sbjct: 84  EKLP--ERVRWSAGQQDVFNALAMNKGEVQTAPPKPETF------GWVRGLGGAILQAAE 135

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           +  +   +LG ++ + G          G    +  Q+Y  G   + +  L+ F+ G V++
Sbjct: 136 NGRALLIMLGQLMLDLGGMLRRPR--LGPWREISAQVYRTGAQALGITALVGFLIGVVLS 193

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL   GA+ F + L+ +  +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA
Sbjct: 194 YLSAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDA 253

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+   + LI PR+ AL +++PLL +  +  AI+G  +       +    F +    
Sbjct: 254 MLVMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLTSLPD 313

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +L N + G+ K       I ++A   G  +  ++ SLG+  TT VV SI+ VI++D+L
Sbjct: 314 AISLTNYWIGIFKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAL 373

Query: 364 FAIFYFAIGI 373
           +AI + ++G+
Sbjct: 374 YAIIFSSVGV 383


>gi|91792032|ref|YP_561683.1| hypothetical protein Sden_0670 [Shewanella denitrificans OS217]
 gi|91714034|gb|ABE53960.1| protein of unknown function DUF140 [Shewanella denitrificans OS217]
          Length = 369

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 18/370 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
                 G+W+    +  AD +  AI     S S I+D  A+   D+  A  ++    + E
Sbjct: 15  CHIALRGDWQLGH-ALDADSICAAIPSQ--SRSVIIDTQALGLWDSSLAVALLQLSRWCE 71

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +    + L      ++QL  L +       + Q   +       +      G+ +     
Sbjct: 72  QAELPLSLDACPPSLQQLLKLATEVP--SNQTQSQAQLSLKQKLRANLTEQGQGVYD--- 126

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   LG  +     +     K +     +I  +   G  G+ +V LIS + G ++A
Sbjct: 127 ----SLLFLGNSVLAISHWLRGKAKTRA--SDIIFFIEQAGPQGLAIVTLISLLVGMILA 180

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G+ QL Q GA+++  DL++I  +RE+G L+TAV++AGR+G+A  A++G+M+ NEE+DA
Sbjct: 181 YLGSVQLRQLGAQVYVADLVAIGMVREMGPLMTAVIMAGRTGAAYAAQLGTMQANEEVDA 240

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+  +  L+ PR+ AL+  +PL+ I ++   IIG  IV      +    +  +   
Sbjct: 241 LSVMGISAMEFLVVPRLVALVFIMPLMCIYSDAIGIIGGGIVANGMG-VSATQYLLQAQV 299

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I TGL+K+      I I   + G A G +SN++G   T  VV++I  +++ D+ 
Sbjct: 300 AVDWLDITTGLVKSLIFGILIAIAGCQAGLACGRNSNAVGVATTKAVVKAIVFLVVSDAA 359

Query: 364 FAIFYFAIGI 373
             I Y  +GI
Sbjct: 360 LNILYDKLGI 369


>gi|74316265|ref|YP_314005.1| ABC transporter permease [Thiobacillus denitrificans ATCC 25259]
 gi|74055760|gb|AAZ96200.1| ABC transport system permease protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 364

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 168/343 (48%), Gaps = 7/343 (2%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90
           +         ++D + +T +DT GA L++   +          +     +  S++    +
Sbjct: 29  LPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAAQP-KADAPAPDLRDFQPRHLSMLRLVAQ 87

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
            +               + +    G+  +   +        +G +             ++
Sbjct: 88  HRAATPP----LPAPRQEGVLALTGRGALTVWSHLVGLLDFVGRLALELAGLVGQPGLWR 143

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                L  Q+  V V  +P+V  + F+ G V A     Q  QFGA IF +D + +  LRE
Sbjct: 144 --WRELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVLRE 201

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           I  ++ AV++AGR+G+AI A++G+MK+ EEIDAI T+GL  + +L+ PR+ ALI+++PLL
Sbjct: 202 ISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGLSPLAVLVIPRVLALIVAMPLL 261

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             + + + ++G  +V+ +   I   +F  R +    L  +  GL KAP  A  I +++ +
Sbjct: 262 VFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALISCR 321

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            G AV   + S+G   T+ VVQS+  VII++++FA+ +  +GI
Sbjct: 322 MGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI 364


>gi|119897982|ref|YP_933195.1| hypothetical protein azo1691 [Azoarcus sp. BH72]
 gi|119670395|emb|CAL94308.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 365

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 168/366 (45%), Gaps = 12/366 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G+W    +S     V  A+        A    + +  +D+ GA L+     +   
Sbjct: 10  VCELSGDWTLRALSPHIAGVRAALAAVPAD--AAWSCAGVLRLDSFGAALLWQAWGRNW- 66

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
                     IE   +L     R     + P       +       +G  +V F      
Sbjct: 67  -------PATIEISAALREVVARVAAAAEHPPAPPRPFTTTEAITLLGAGLVGFRRHLAD 119

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG ++ +         ++      +   +Y V V  +PV  L+ F+ G V++   A
Sbjct: 120 LTVLLGQLVLDVVHLLRHPREWPVL--EISANLYKVAVRAMPVTALVGFLIGVVLSYLSA 177

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA+IF ++++ +  +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+  M
Sbjct: 178 LQLRAFGADIFIVNILGLGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDALAAM 237

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+     L+ P++ AL +++PLL +  +  A+ G  +  W    + F  F         L
Sbjct: 238 GISASLRLVLPKVLALTLAMPLLVLWTSAVALFGGMVSAWMELGMSFGFFLETLPRVVPL 297

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           AN+F GL K       I +VA   G  V  ++ SL    T  VV +I++VI++D+LFAI 
Sbjct: 298 ANVFVGLTKGLVFGLLISLVACHFGLRVKPNTESLSANTTASVVTAITVVILVDALFAIA 357

Query: 368 YFAIGI 373
              IG+
Sbjct: 358 TRRIGV 363


>gi|94987489|ref|YP_595422.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731738|emb|CAJ55101.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 386

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/368 (23%), Positives = 155/368 (42%), Gaps = 7/368 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                F+GNW+  +    A      +N         +  +++   D+     I   + K 
Sbjct: 26  TLEISFSGNWQLNQPIPDATRFASQLN-YPVVKELYLKTNSLGIWDSSLIAFIKTLINKA 84

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +            + +LI    +        + +    +  +   +IG   +   +  
Sbjct: 85  QSQQITINDHELPAGIKNLIQLAFQ----TPPNKEAHKKTTQISFLEYIGDITLSLPSTI 140

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 LG +  +T               ++ R M   GV  +P+V LIS + G ++A  
Sbjct: 141 QKILTFLGEMTLSTKRLITGHSD--CSSTNIWRCMQQAGVEALPIVSLISLLVGLILAFV 198

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
           G  QL  FGAEI+   L++I   R +G ++T V+++GR+G++  A IG+M +NEEIDA+ 
Sbjct: 199 GVIQLRMFGAEIYVSSLVAIGMTRIMGAVMTGVILSGRTGASYAATIGTMNVNEEIDALM 258

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T G+     L+ PR+ AL    PLL + ++F  ++G  IV      I    + +      
Sbjct: 259 TFGIRPSDFLVMPRLIALTTMTPLLVVYSDFMGMLGGFIVGVGVLGIEPLEYINFTQKGF 318

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L N++ G+I        I I    +G   G +++++G   T+ VV SI  ++I  +   
Sbjct: 319 ALKNLWVGIIHGIAFGIIIAITGCYQGLNSGKNASAVGLATTSAVVYSIVGIVIATACLT 378

Query: 366 IFYFAIGI 373
           I +    I
Sbjct: 379 IIFNIFNI 386


>gi|114563133|ref|YP_750646.1| hypothetical protein Sfri_1962 [Shewanella frigidimarina NCIMB 400]
 gi|114334426|gb|ABI71808.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 370

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 11/370 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +   +   AG+W+  + + +  D+   +  + QS + I   + ++  D+  A  ++    
Sbjct: 12  DDNCLLNLAGDWQLGQ-APLGADICAELPSNCQSITLI--TTELSHWDSSLAIALLQLSR 68

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
               + +   + T                +   +P       +   L   + + ++K   
Sbjct: 69  --WCEQQKISLDTQQTPQGLQQLLQLATDVPVYQPTND---GAIGGLWPTLRRSLIKQGL 123

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   +G      G +     + +     +I  +   G  G+ +V LIS + G ++A
Sbjct: 124 QVHDGLVFVGDCTLVLGRWLGGKARTRR--SDIIFFIEQAGPKGLAIVTLISLLVGMILA 181

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G+ QL Q GA+++  +L++I  +RE+G L+T V++AGR+G+A  A++G+M++NEEIDA
Sbjct: 182 YLGSVQLRQLGAQVYVANLVAIGMVREMGALMTGVIMAGRTGAAYAAQLGTMQVNEEIDA 241

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+  +  L+ PR+ ALI  +PL+ I ++   ++G ++V      + +  +  +   
Sbjct: 242 LRVMGIPTMEFLVLPRLLALIFIMPLMCIYSDVIGMLGGALVANGMG-VSYTQYILQTQV 300

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I TGLIK+      I I   + G   G  SN++G   T  VV++I  +++ D+ 
Sbjct: 301 AIDWVDISTGLIKSLIFGFLIAIAGCQAGLLCGRDSNAVGLATTHAVVKAIVFLVVADAA 360

Query: 364 FAIFYFAIGI 373
             I Y  +GI
Sbjct: 361 LNILYDKLGI 370


>gi|148264681|ref|YP_001231387.1| hypothetical protein Gura_2637 [Geobacter uraniireducens Rf4]
 gi|146398181|gb|ABQ26814.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 401

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 74/372 (19%), Positives = 158/372 (42%), Gaps = 12/372 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--- 61
              +   AG+W+        D V+  +  + +      +   +   D+     +      
Sbjct: 39  DGALLTLAGDWRLGSAIPSPDGVIAGLGAAEKGQRLAFETGNLQGWDSGLLVFLAKLFDI 98

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
             +    +   G+   + +L  L S   ++       +         +    +    +  
Sbjct: 99  CRRNGISVDESGLPAGVRKLIDLASPEKQRSGVTHGGEHP-------SFLVWVADTALAQ 151

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +  +      +G       +       F+     LI  +   G   +P+V LIS + G +
Sbjct: 152 VKGAKEVLAFIGEATLAFVKMLRGKADFRRM--DLIVTIQETGAQALPIVTLISLLVGMI 209

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A   + QL  FGA+I+  D++ I  +R +G ++T ++++GR+G+A  A++G+M++NEEI
Sbjct: 210 LAFIASIQLKMFGAQIYVADVVGIGIVRVMGAIMTGIIMSGRTGAAFAAQLGTMQVNEEI 269

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+G   V  L+ PR+ AL++ +PLL + ++   ++G  IV     D+ F  +  + 
Sbjct: 270 DALETLGFSPVEFLVLPRMLALMLMMPLLCVYSDLMGVLGGMIVGVGMLDLGFMEYVHQS 329

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            S   L +   GL  +      + +     G      ++++G   T+ VV  I  +++  
Sbjct: 330 RSALNLTHFLVGLFHSFVFGILVAVAGCLRGLQCERSASAVGYAATSAVVTGIVCIVVAT 389

Query: 362 SLFAIFYFAIGI 373
           ++  +    +GI
Sbjct: 390 AIITLSCQVLGI 401


>gi|189426230|ref|YP_001953407.1| hypothetical protein Glov_3181 [Geobacter lovleyi SZ]
 gi|189422489|gb|ACD96887.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 261

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
               N    IG++ +  + +       LG           S  +  G  + +++Q+ ++G
Sbjct: 4   RQMTNFLRAIGRRTIAQVQE-------LGNCGQFLVYALYSILRRPGRPVHILKQVSFIG 56

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              + V++L +  TG V+  QG + L++FG+E      +++  +RE+G +L+A+M+ GR+
Sbjct: 57  AKSLFVIVLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLSALMVTGRA 116

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GSAI AEIG M+I+E+IDA+ TM LD  + LISP+  A +IS+PLL  + +   I G  +
Sbjct: 117 GSAITAEIGIMRISEQIDALETMALDPYKYLISPKFIAAMISMPLLCAIFDVVGIYGGWM 176

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           V  K   +    +FS  + +    ++++G +K+      I  +   +G+  G  +  + +
Sbjct: 177 VGVKLLGVNPGAYFSEMYKSVEWKDVYSGFVKSYSFGIIIAWIGCYKGYYAGHGAEGVSR 236

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV +  ++++ D        
Sbjct: 237 ATTESVVLTSVLILVWDYFLTSILL 261


>gi|295675321|ref|YP_003603845.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
 gi|295435164|gb|ADG14334.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
          Length = 389

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 173/369 (46%), Gaps = 14/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + R +G W +  ++   D    +    + +        DLS +  +D +G + +     +
Sbjct: 31  IVRLSGQWTALALARDRDTGHVIPQLRSLTGAQGIGGWDLSRVDSMDHVGGQALWRVWGR 90

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                    ++     +F  I+     +   +   R        +    +G  I  F+  
Sbjct: 91  KLPPG--TALTDTQRDIFERIALLDTVRESAEPVTR-------FDPFTRLGLGIFSFVEH 141

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG V+ +                 +   +Y  G   +P+  L++F+ G V++ 
Sbjct: 142 MQGGVAMLGRVVLDLLAILRKPKLTP--WTEISANIYNAGARALPITALVAFLIGIVLSY 199

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FGA  F ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+
Sbjct: 200 LSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAM 259

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG+     LI PR+ AL +++PLL +  N  ++ G ++       I  + F  +    
Sbjct: 260 RVMGIPHGLRLILPRVIALAVAMPLLVMWTNVISLTGGALAAKLVLGIDMSFFARQLPVV 319

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D++F
Sbjct: 320 VPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAVF 379

Query: 365 AIFYFAIGI 373
           AI +  +G+
Sbjct: 380 AILFQNVGL 388


>gi|294084216|ref|YP_003550974.1| organic solvents resistance ABC transporter [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663789|gb|ADE38890.1| ABC-type transport system involved in resistance to organic
           solvents [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 258

 Score =  216 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 66/254 (25%), Positives = 123/254 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +    LG +   T      ++    +   L RQ   +G   +PVV L +  
Sbjct: 5   VRNIGRAVLNFLASLGRITLFTLAAIRWTFFPPYYWQQLWRQTLDIGYYSLPVVGLTTLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G V+A Q     ++F AE     ++ +   RE+G +L  +M+AGR G+++ AEIG+M++
Sbjct: 65  SGMVLALQSYTGFARFSAEDTVATVVVLSVTRELGPVLAGLMVAGRIGASMAAEIGTMRV 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+    ++ L++PRI A  + LP L ++ +   + G  IV         +++
Sbjct: 125 TDQIDALDTLSTRPMQYLVAPRIMAGTLCLPFLVLIGDIIGVFGGYIVGVYRLGFNPSIY 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            SR      +++I  GL+KA      I ++    G+  G  +  +G+  T  VV S  ++
Sbjct: 185 LSRTLEYLEVSDITLGLVKAAVFGFLIALMGCYHGYHSGRGAEGVGRATTNAVVSSSILI 244

Query: 358 IIIDSLFAIFYFAI 371
           +I + L    YF +
Sbjct: 245 LIANYLVTALYFGV 258


>gi|170691590|ref|ZP_02882755.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
 gi|170143795|gb|EDT11958.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
          Length = 389

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
           + R +G W +  ++        +    +          DLS I  +D +G + +      
Sbjct: 31  IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +L      I +  +L+           +           +    +G  I  F  
Sbjct: 91  RMPPDTELTDTQRDIFERIALLDTVRETAEPVIRF----------DPFTRLGLAIFSFFE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAITP--WTEISANIYNAGTKALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  +  A+ G ++       I  + F      
Sbjct: 259 MRVMGIPHGLRLILPRVIALGVAMPLLVMWTDIIALTGGAVAAKIVLGIDMSYFARALPG 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I I     GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|205355658|ref|ZP_03222428.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205346435|gb|EDZ33068.1| putative ABC transport system permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 337

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 13/332 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
            + KI  +G+++  + LF L    +++  K +K  ++     F      +GK  ++ +  
Sbjct: 68  KNIKIAKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G   ++      +   F+   ++ +  +       +P+VIL + + G V+A 
Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +EI A+
Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG      +I PR+ AL+I++PL+  +++  +IIG  +V     DI FA F   F   
Sbjct: 241 NTMGFRSFEFIIIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRHFREA 300

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + +IF GL KAP     IG++A   GF V 
Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVK 332


>gi|307728301|ref|YP_003905525.1| hypothetical protein BC1003_0230 [Burkholderia sp. CCGE1003]
 gi|307582836|gb|ADN56234.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003]
          Length = 389

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
           + R +G W +  ++        +    +          DLS I  +D +G + +      
Sbjct: 31  IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           +     +L      I +  +L+           +           +    +G  I  F  
Sbjct: 91  RMPPDTELTATQRDIFERIALLDTVRETAEPVVRF----------DPLTRLGLGIFSFFE 140

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAITP--WTEISANIYNAGTRALPITALVAFLIGIVLS 198

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGAVAAKIVLGIDMSYFARALPG 318

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 379 FAILFQNVGL 388


>gi|296160361|ref|ZP_06843178.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
 gi|295889342|gb|EFG69143.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
          Length = 377

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 170/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
           + R +G W +  ++        + + ++          DLS I  +D +G + +      
Sbjct: 19  IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+           K           +    +G  I  F  
Sbjct: 79  KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 129 HLYGGVAMLGRVVLDLLAIARKPKITP--WTEISANVYNAGTQALPITALVAFLIGIVLS 186

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 367 FAILFQNVGL 376


>gi|91781621|ref|YP_556827.1| ABC transporter inner membrane protein [Burkholderia xenovorans
           LB400]
 gi|91685575|gb|ABE28775.1| Putative ABC transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
          Length = 377

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 170/370 (45%), Gaps = 16/370 (4%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
           + R +G W +  ++        + + ++          DLS I  +D +G + +      
Sbjct: 19  IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
           K      L      I +  +L+           K           +    +G  I  F  
Sbjct: 79  KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  +LG V+ +                 +   +Y  G   +P+  L++F+ G V++
Sbjct: 129 HLYGGVAMLGRVVLDLLAIVRKPKITP--WTEISANVYNAGTQALPITALVAFLIGIVLS 186

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
              A QL  FGA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA
Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F      
Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAARIVLGIDMSYFARALPG 306

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++
Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366

Query: 364 FAIFYFAIGI 373
           FAI +  +G+
Sbjct: 367 FAILFQNVGL 376


>gi|237751540|ref|ZP_04582020.1| ABC transport system permease [Helicobacter bilis ATCC 43879]
 gi|229372906|gb|EEO23297.1| ABC transport system permease [Helicobacter bilis ATCC 43879]
          Length = 387

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 2/276 (0%)

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
           P R    N F +    IG+  V F   + S  + +G+ +      C     F+    SLI
Sbjct: 114 PYRPKRLNIFSSFFSFIGQWCVSFYQTALSFFNFMGMFLHFFMLGCLKPSNFR--FKSLI 171

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
             +Y  G   +PV ++ S + G  I  QGA+QL+  G  I S+D  + L LRE+G  + A
Sbjct: 172 YHIYEQGFKALPVGLMTSLIIGYAITLQGAYQLNSMGVPIMSVDTTAKLALREMGPFILA 231

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           ++IAGRS S+  A++GSM++ EE+ A++ M L+    LI PRI ALII +PL+   A+  
Sbjct: 232 LVIAGRSASSFTAQLGSMRLTEELSAMKAMNLNIFYFLIIPRILALIIVMPLMVFAADAI 291

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A+ G  + I    +I F  +  RF+ T ++ + + G++KAP     IGIV    G     
Sbjct: 292 ALFGGMVAIKTSINIGFETYLERFYETVSITHFWIGVVKAPVFGAIIGIVGCFRGLECRG 351

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            + S+GK  T  VV +I  +I+ +++F+  +    +
Sbjct: 352 DTQSIGKMTTMSVVNAIFWIIMANAIFSFIFTRYNL 387


>gi|298530716|ref|ZP_07018118.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510090|gb|EFI33994.1| protein of unknown function DUF140 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 256

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/249 (30%), Positives = 134/249 (53%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             + +      LG ++    +  +   +    +    +QM ++GV+ + VV L S  TG 
Sbjct: 8   LGHQTLGFLQELGRIMVLFLQALSWLVRPPFRIRLFFKQMEFIGVNSLFVVALTSLFTGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q  +  S FGAE      +++   RE+G ++T +M+ GR+GSAI AEIG+M++ E+
Sbjct: 68  VLALQTFYAFSMFGAETLVGATVALSMTRELGPVITGLMVTGRAGSAICAEIGTMRVTEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+  M ++ V+ L+ PRI A +I LPLLTI++N   I+G  +V  +  DI   +F ++
Sbjct: 128 VDALTVMAINPVQYLVLPRIVAGVIMLPLLTIISNTMGILGGYLVGVQLLDIHGGMFLNK 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                T+A+++ GLIKA      + +V   +GF     +  +G+  T  VV S  ++++ 
Sbjct: 188 IQEHVTMADVYNGLIKASAFGGILTLVGCYKGFYTRGGAEGVGRSTTQAVVMSSVLILVS 247

Query: 361 DSLFAIFYF 369
           D       F
Sbjct: 248 DYFLTALMF 256


>gi|288962766|ref|YP_003453060.1| ABC transport system permease protein [Azospirillum sp. B510]
 gi|288915032|dbj|BAI76516.1| ABC transport system permease protein [Azospirillum sp. B510]
          Length = 258

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 123/253 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +              G +   TG   +   +   +   ++RQM  +G   +PVV L +  
Sbjct: 4   LAATGRAFLIFLEATGRLALFTGSALSHCVRPPLYPRQILRQMIDIGYYSLPVVGLTALF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+A+ AEIG+M++
Sbjct: 64  TGMVLALQSYSGFSRFQAEGAIATVVVLSITRELGPVLAGLMVAGRIGAAMAAEIGTMRV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  +  + L++PR+ A +  +PLL ++A+   + G  +V     D   A +
Sbjct: 124 TEQIDALSTLSTNPYKYLVAPRLIAGLTMVPLLVVVADIIGVFGGFLVGVYRLDFNAASY 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R        ++ +GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 184 INRTWEFLQPVDVISGLVKAAIFGFLIALMGCYHGYHSKGGAQGVGAATTNAVVSASIMI 243

Query: 358 IIIDSLFAIFYFA 370
           ++ + L    +F+
Sbjct: 244 LVWNYLITGLFFS 256


>gi|187922498|ref|YP_001894140.1| hypothetical protein Bphyt_0491 [Burkholderia phytofirmans PsJN]
 gi|187713692|gb|ACD14916.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN]
          Length = 377

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 14/369 (3%)

Query: 8   VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + R +G W +  ++        + +  +          DLS I  +D +G + +      
Sbjct: 19  IVRLSGQWTALALARDRATGHVIPLLRSLVGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 78

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                    ++     +F  I+     + K +   R        +    +G  I  F   
Sbjct: 79  KMPPDTT--LTDTQRDIFERIALLDTVREKAEPVIR-------FDPLTRLGLAIFSFFEH 129

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 +LG V+ +                 +   +Y  G   +P+  L++F+ G V++ 
Sbjct: 130 LYGGVAMLGRVVLDLLAIARKPKITP--WTEISANIYNAGTKALPITALVAFLIGIVLSY 187

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A QL  FGA  + ++++ +  +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+
Sbjct: 188 LSAQQLRLFGANQYIVNILGLSVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAM 247

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG+     LI PR+ AL +++PLL +  N  A+ G ++       I  + F       
Sbjct: 248 RVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIALGIDMSYFARALPGV 307

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +AN++ GL K       I IV    GF +  +S SLG+  TT VV SI+IVI+ D++F
Sbjct: 308 VPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAVF 367

Query: 365 AIFYFAIGI 373
           AI +  +G+
Sbjct: 368 AILFQNVGL 376


>gi|242310202|ref|ZP_04809357.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
 gi|239523499|gb|EEQ63365.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
          Length = 365

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 8/366 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
              R  G W       I   +       + +    + L    ++D  G  +++ F+ +  
Sbjct: 7   ATLRLDGIWDYRISKSILSQLQAI---KLTNVKINIVLGEHFDLDFCGGGVLLEFVTELE 63

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
            + ++     +  Q         +     + P  +    +   +H      I   I    
Sbjct: 64  SQQRIL---ENQLQQNPKSQKIFKILSTKEIPSNTNLTQNIIKIHSDSFIIIKNNIKTLI 120

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                LG ++        +    +  L +    +    +  V +V L  F+ G VIA QG
Sbjct: 121 LSLGFLGEILYTFLASFINFKSIR--LKATFYFIQESLIKAVGIVALACFLIGIVIAYQG 178

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           + QL QFGA I  +++ S+L LRE+  ++TA++IAGRS SA  AEIG M+  +EIDA+R 
Sbjct: 179 SIQLRQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEIDAMRV 238

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG + +  L+ PR+ AL   LPL+  +A+   ++G+  V     DI    F  RF     
Sbjct: 239 MGFNPMTFLVVPRMLALCCVLPLVVFIADLFGLVGSMFVCQIQLDISTEQFLERFLQMVD 298

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + + + G+ KAPF    I  +    GF+V   + S+G   T  VV+SI  VI  D++ ++
Sbjct: 299 MRHFWVGIAKAPFFGLIISFIGCFHGFSVAKDTRSIGVHTTKSVVESIFFVIAFDAICSV 358

Query: 367 FYFAIG 372
            +  +G
Sbjct: 359 IFTEMG 364


>gi|227822231|ref|YP_002826202.1| toulene ABC transporter, permease protein, putative [Sinorhizobium
           fredii NGR234]
 gi|227341231|gb|ACP25449.1| toulene ABC transporter, permease protein, putative [Sinorhizobium
           fredii NGR234]
          Length = 321

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 143/324 (44%), Positives = 198/324 (61%), Gaps = 5/324 (1%)

Query: 50  IDTIGAELIMYFMEKYH-GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
           +DT GA +I  FM             +   ++   L+     +    Q  +       F+
Sbjct: 1   MDTAGAWIIRRFMNGIGSEAGGEIHFAHGGDRYVELVRALPGEL--RQPERSKRKDPLFQ 58

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            L   IG+  V    D+ +  +ILG  +                  +++ Q+  +GV   
Sbjct: 59  RLFAPIGEVTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSP--AAIVHQIDRMGVMAT 116

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P++ L+SF+ GA+IAQQGAFQL  FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI
Sbjct: 117 PIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAI 176

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK+ EE+DA++ MGL  V +L+ PR+ AL I+LPLLTI+ANF+A++GA++V W 
Sbjct: 177 TAEIGSMKMREEVDALKVMGLSPVGVLVFPRLVALTIALPLLTIIANFAALVGAALVAWT 236

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
           Y  I  A F +R       +++  G+IKAPFMA  IG+VA  EG  VG  + SLG++VT+
Sbjct: 237 YSGITVATFVARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTS 296

Query: 349 CVVQSISIVIIIDSLFAIFYFAIG 372
            VV+SI +VI+ID LFA+FY AI 
Sbjct: 297 SVVKSIFVVILIDGLFAMFYAAID 320


>gi|302328064|gb|ADL27265.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 364

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 75/352 (21%), Positives = 147/352 (41%), Gaps = 14/352 (3%)

Query: 21  SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77
           +  +  ++ +   ++      +D S++  +D        L+    EK   K+ L+     
Sbjct: 24  AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 83

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
           I+Q    +      +   ++           N+   +G      + +      +L   I 
Sbjct: 84  IKQHLQNLRKMVPPEKPQRETN---------NILEMMGGAGFSLLKEVFEVLVLLFTAIY 134

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     K K     + +QM+  G   + +  L   +    +A Q +  L+  G   
Sbjct: 135 --WTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGGS 192

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           +    +  L   EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M +  V+ L+ 
Sbjct: 193 YLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLVV 252

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR  AL I+ P+L+  A+        ++ + + DI F+ +                 IKA
Sbjct: 253 PRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIKA 312

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                 + ++A  +G      + ++GK  T+ VV +I  ++I D+LFA  ++
Sbjct: 313 LVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 364


>gi|27363501|ref|NP_759029.1| putative ABC transport system permease [Vibrio vulnificus CMCP6]
 gi|27359617|gb|AAO08556.1| Putative ABC transport system permease protein [Vibrio vulnificus
           CMCP6]
          Length = 357

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 11/354 (3%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75
            S  +  + +     ++    S + +V+   +T ID  G   +     ++        + 
Sbjct: 15  TSEIVGNLWEKANRILDTHPNS-AIVVNAHNLTFIDISGIAFLSDLQTRFRAPGAEISIV 73

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
                L  L+                      +     +G+   + + D  S A  +   
Sbjct: 74  GLKPSLAELV-------PPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVARFVKDC 126

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
                     S +      ++       G   VP+++LI F+ G +IA +      QFGA
Sbjct: 127 AVVF--KIGISRRKNVNWATVSDIASRAGADAVPIIMLIGFLMGVIIAFEIGLVAEQFGA 184

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
            +F  D + I  LRE+G L+TA++ AGR+G+A  AEIG+ K+NEEI+A+RT G+  V  L
Sbjct: 185 VLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISPVEFL 244

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI+A I+ LPLLT+ A+   + G ++V    +DI F  ++ +  S  ++ +   GLI
Sbjct: 245 VIPRIYASILVLPLLTVFADIIGVFGGALV-LLKFDISFVQYYHQLLSALSIWDFGFGLI 303

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           KA      I ++  + G A G  S S+G   T+ VV SI  +++ID  F +   
Sbjct: 304 KATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT 357


>gi|313672871|ref|YP_004050982.1| hypothetical protein Calni_0908 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939627|gb|ADR18819.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 256

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 131/248 (52%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                + A   G +     +     ++       LI+QM ++G + + V+IL    TG V
Sbjct: 9   GAPILNLALESGRIFLLLIDSILWIFRPPFRWKLLIKQMEFIGANSISVIILTGTFTGMV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
            A Q      +FGAE     ++ +   RE+G +L+A+M+A R+GSAI AEIG+MK+ E+I
Sbjct: 69  FAFQSYIGFHKFGAEYMVGTVVGLGMARELGPVLSAIMVAARAGSAITAEIGTMKVTEQI 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ ++ +D V+ L++PRI A ++ +PLL  +A F  ++G   V  K  DI   ++    
Sbjct: 129 DALHSLAVDPVQYLVTPRILAGLLVMPLLNSIAVFCGVLGGYFVGVKILDINRTLYLQYM 188

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +    L++++ G+IK+      + +V   +G AV   +  +G+  T  VV S  ++++ D
Sbjct: 189 YQYVDLSDLYNGMIKSVVFGLILTLVGCYKGMAVSGGAEGVGRATTESVVLSCILILVFD 248

Query: 362 SLFAIFYF 369
            +   F F
Sbjct: 249 YILTAFMF 256


>gi|320353203|ref|YP_004194542.1| hypothetical protein Despr_1079 [Desulfobulbus propionicus DSM
           2032]
 gi|320121705|gb|ADW17251.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM
           2032]
          Length = 371

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 169/371 (45%), Gaps = 15/371 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60
           S+         G W          ++V A++ SI   +     + + E DT     +   
Sbjct: 12  SQPSRLTVHLQGAWTLRTDPPPPTELVGALDSSI--RTLAFLSTDLAEWDTRLLVFLKAT 69

Query: 61  --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
                     + L+G+   + +L +L              + ++  N  + L   IG+  
Sbjct: 70  TAAARNGGIAVDLEGLPPGVRRLLALSEAV--------PEKVTYGKNVRELLVTRIGRLT 121

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +     +   A   G +I       A    FK         +   GV  +P+V LI+ + 
Sbjct: 122 LALSGQAREAAAFTGEIILACMALAAGKKPFK--WRDFFYFIQSCGVESLPIVSLIAVLV 179

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G +++  GA QL  FGA+I+  +L+ +  + E+G L++ V+IAGR G+A  A++G+M++N
Sbjct: 180 GVILSFVGAVQLQMFGAQIYVANLVGLGMVLEMGALMSGVIIAGRIGAAYAAQLGTMQVN 239

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+RTMG+  V  L+ PR+ AL++ LPLL + A+   I+G S++     D+    + 
Sbjct: 240 EEIDALRTMGISPVGFLVLPRMLALMLMLPLLCVYADIMGILGGSVIGVTMLDLSLIEYL 299

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +   T  L     G++KA      IG      G   G  + ++G+  T+ VV SI +++
Sbjct: 300 EQTRKTLRLGQCGQGILKASIFGVLIGYAGCLRGMQCGRSALAVGEATTSAVVTSIVLIV 359

Query: 359 IIDSLFAIFYF 369
           + DS+     +
Sbjct: 360 VSDSIITFLLY 370


>gi|56710306|dbj|BAD81021.1| permease component of ABC-type transport system [uncultured
           bacterium]
          Length = 405

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 17/378 (4%)

Query: 3   ENGITVFRFAGNWKS----PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
           +    V   +G W+     P  + +A+  + A   + Q+    VD +A+   D+     +
Sbjct: 38  QGDSLVVALSGAWQLGRPAPRFAPLAESALSAGTGATQTARVTVDAAALGSWDSSLLIFL 97

Query: 59  MY---FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
                F E +        +   I  L +L      + +  + P           L   +G
Sbjct: 98  RQGQEFCEAHKLDFVTDALPDRITSLLALARAVPERAVDAEVPALP--------LRARVG 149

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
              V   + S +    LG V+           + +         +   G   +P+V LI+
Sbjct: 150 LAGVSAWDASMAAVTFLGEVLQRGALLLRGRVRMR--WREFWVVVQSNGSGALPIVTLIA 207

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + G +IA  G   L +FGA  ++  L+    LRE+G L+T ++IAGR+G+A  AE+GSM
Sbjct: 208 LLVGVIIAFLGVVVLKRFGAGYYASYLVGFGMLREMGALMTGIIIAGRTGAAFAAELGSM 267

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           KI EEIDA+ T+G+  V  L+ PR+  L + +PLL + A+   I+G   V     D+   
Sbjct: 268 KITEEIDALTTLGISPVDHLVLPRVLGLFVMMPLLVVYADLVGIVGGMGVAVAMLDVTPT 327

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F +   +   L++   G+ K       IG+    +G   G  + ++G+  T+ VV SI+
Sbjct: 328 QFMNGLLTAVVLSDALLGVFKGLIFGAIIGLAGCMKGLQAGSDAGAVGRAATSAVVISIT 387

Query: 356 IVIIIDSLFAIFYFAIGI 373
           +VI+ +++       + I
Sbjct: 388 LVILANAVVDWLAALLLI 405


>gi|148263112|ref|YP_001229818.1| hypothetical protein Gura_1039 [Geobacter uraniireducens Rf4]
 gi|146396612|gb|ABQ25245.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 256

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 131/252 (51%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + K  + + S    +G +++          +  G  + +++Q+ ++G     V+ L +  
Sbjct: 5   VEKLGSLTLSILQEMGRMVNFIIYAFYLIIRSPGKPVHILKQIRFIGAKSFFVIFLTASF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG + L++FG+E      +++  +RE+G +LTA+M+ GR+GSAI AEIG M+I
Sbjct: 65  TGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVTGRAGSAISAEIGIMRI 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ TM L+  + L+SP++ A IISLPLL  + +   I G  +V  K   +    +
Sbjct: 125 TEQIDALETMALEPCKYLVSPKLLAAIISLPLLCAIFDVVGIYGGYLVGVKLLGVNPGAY 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           F     +    ++++G+IK+      I  +   +G+  G  +  + +  T  VV S  +V
Sbjct: 185 FHEMEKSVEWKDVYSGIIKSVSFGVIIAWICCYKGYFAGHGAEGVSRATTAAVVMSSVMV 244

Query: 358 IIIDSLFAIFYF 369
           +I D        
Sbjct: 245 LIWDYFLTSVLL 256


>gi|261416607|ref|YP_003250290.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373063|gb|ACX75808.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 354

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/352 (21%), Positives = 147/352 (41%), Gaps = 14/352 (3%)

Query: 21  SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77
           +  +  ++ +   ++      +D S++  +D        L+    EK   K+ L+     
Sbjct: 14  AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 73

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
           I+Q    +      +   ++           N+   +G      + +      +L   I 
Sbjct: 74  IKQHLQNLRKMVPPEKPQRETN---------NILEMMGGAGFSLLKEVFEVLVLLFTAIY 124

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     K K     + +QM+  G   + +  L   +    +A Q +  L+  G   
Sbjct: 125 --WTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGGS 182

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           +    +  L   EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M +  V+ L+ 
Sbjct: 183 YLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLVV 242

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR  AL I+ P+L+  A+        ++ + + DI F+ +                 IKA
Sbjct: 243 PRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIKA 302

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
                 + ++A  +G      + ++GK  T+ VV +I  ++I D+LFA  ++
Sbjct: 303 LVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 354


>gi|197120798|ref|YP_002132749.1| hypothetical protein AnaeK_0378 [Anaeromyxobacter sp. K]
 gi|196170647|gb|ACG71620.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K]
          Length = 370

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 155/365 (42%), Gaps = 10/365 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              +G W    ++ +   +        +  + ++D S +  +DT GA L+          
Sbjct: 16  VHCSGAWTVHLVAGLDRALRRL--AWPEHVAVVIDASGVAAMDTAGAWLLRRAARDLERG 73

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
            +   ++   E             + +                  +G+            
Sbjct: 74  GRPVTLTLRPEH------EALLALVTSSGEVAPRRARERARFLSELGRSAWSSALAIGGV 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G +        A   + +      +  +   G   +P   L+SF  G V+A QGA 
Sbjct: 128 LTLVGELAGRVARARAGPLRVRA--RQAVLHVQSAGFEALPTTALLSFFVGVVLASQGAT 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGA I   DL+ +  LRE+  L+TA+++AGRSGSA  A+IG+MK+  EI+++R  G
Sbjct: 186 LLRPFGAGILIADLVGLAMLRELSPLVTAIVVAGRSGSAYAAQIGAMKMAGEIESLRAGG 245

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  V  L+ PRI AL + +PLLT+ A+   + GA++V      +    F  R       +
Sbjct: 246 VSPVDALVVPRIAALALVVPLLTVAADVLGLAGATLVARAELGMHAPEFLGRVAREVHAS 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   G+ KAP     +  V   +G      + S+G++ T  VVQS+ +V++ D L  +  
Sbjct: 306 SYLLGVAKAPVFGVIVAAVGCHQGLRASDDAGSVGRRTTGAVVQSMFLVVLADGLVLVVS 365

Query: 369 FAIGI 373
             +GI
Sbjct: 366 RQLGI 370


>gi|15603974|ref|NP_220489.1| hypothetical protein RP096 [Rickettsia prowazekii str. Madrid E]
 gi|81554918|sp|Q9ZE51|Y096_RICPR RecName: Full=Probable ABC transporter permease protein RP096
 gi|3860665|emb|CAA14566.1| unknown [Rickettsia prowazekii]
 gi|292571688|gb|ADE29603.1| ABC transporter permease protein [Rickettsia prowazekii Rp22]
          Length = 259

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/251 (27%), Positives = 131/251 (52%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +   A  +G+    +    +S  K   +L  +IRQ+ ++G   +PVV + +F +GA
Sbjct: 9   VGKHTIKFAQSVGIFSLFSFIAISSIIKPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSGA 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q     S+F AE     ++ +   RE+G +L  +++AGR G++I AEI +M++ E+
Sbjct: 69  VLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGASIAAEIATMRVTEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V     D     + + 
Sbjct: 129 VDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDIIGVMGGYLVGIYKLDFNSTAYLTS 188

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++ +GLIKA      I I++   G+  G  +  +G+  T+ VV S  +++I 
Sbjct: 189 TFQYLEPIDVISGLIKATVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILIS 248

Query: 361 DSLFAIFYFAI 371
           + L    +F +
Sbjct: 249 NYLITELFFKV 259


>gi|144899037|emb|CAM75901.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 257

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 119/253 (47%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +    +G + +  G   +   +   +    +R M  +G   +PVV L +  
Sbjct: 4   VAAIGRIFLAFLSHVGRLSAFAGTALSHVVRPPFYPRLTLRAMVEIGYYSLPVVGLTAVF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F AE     ++ +   RE+  +L  +M+AGR G+++ AEIG+M++
Sbjct: 64  TGMVLALQSYSGFSRFAAESAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  +  + L++PR+ A ++ +P L ++A+   + G  IV         + +
Sbjct: 124 TEQIDALTTLSTNPFKYLVAPRLLAGLLMVPCLVLVADIIGVFGGYIVGVYKLGFNPSTY 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +R        ++ +GL KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 184 LARTWEFLEPLDVISGLTKAAVFGFIISLMGCYHGYYSRGGAQGVGAATTNSVVSAAIMI 243

Query: 358 IIIDSLFAIFYFA 370
           +I + +    YF 
Sbjct: 244 LIFNYVITALYFG 256


>gi|83591748|ref|YP_425500.1| hypothetical protein Rru_A0408 [Rhodospirillum rubrum ATCC 11170]
 gi|83574662|gb|ABC21213.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 257

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 119/249 (47%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +    +G +   TG   +   +   F   + RQ+  +G   +PVV L +  TG V
Sbjct: 8   GRVFLTFLRHVGRLSVFTGTALSHCVRPPFFPRLIGRQLVEIGYYSLPVVGLTAIFTGMV 67

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++ Q     ++F AE  +  ++ +   RE+G +L  +M+AGR G+A+ AEIG+MK+ E+I
Sbjct: 68  LSLQSHSGFARFSAEGATATVVVLSMTRELGPVLAGLMVAGRIGAAMAAEIGTMKVTEQI 127

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  +  + L+ PR+ A +  LP+L + A+   + G  ++         + + +  
Sbjct: 128 DALTTLATNPYKYLVVPRLIAGVTMLPILVLTADIIGVFGGYLIGVYKLGFNPSNYIAST 187

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  ++ +GL+KA      I ++    G      +  +G   T  VV +  ++++ +
Sbjct: 188 WEFLEPMDVISGLVKASVFGFIIALMGCYHGSQSKGGAQGVGAATTNAVVSASILILVCN 247

Query: 362 SLFAIFYFA 370
            +    +FA
Sbjct: 248 YMITELFFA 256


>gi|67458472|ref|YP_246096.1| ABC transporter permease protein [Rickettsia felis URRWXCal2]
 gi|75537058|sp|Q4UNC7|Y080_RICFE RecName: Full=Probable ABC transporter permease protein RF_0080
 gi|67004005|gb|AAY60931.1| ABC transporter permease protein [Rickettsia felis URRWXCal2]
          Length = 259

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 130/252 (51%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G     +    +S  +   +L  +IRQ+ ++G   +PVV + +F +G
Sbjct: 8   SVGKRTIKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEI +M++ E
Sbjct: 68  AVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V     D     + +
Sbjct: 128 QVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSTAYLT 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I
Sbjct: 188 STFHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247

Query: 360 IDSLFAIFYFAI 371
            + L    +F +
Sbjct: 248 SNYLITELFFKV 259


>gi|114777488|ref|ZP_01452485.1| ABC-type transport system involved in resistance to organic
           solvents [Mariprofundus ferrooxydans PV-1]
 gi|114552270|gb|EAU54772.1| ABC-type transport system involved in resistance to organic
           solvents [Mariprofundus ferrooxydans PV-1]
          Length = 257

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 81/255 (31%), Positives = 128/255 (50%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +      +      +GL  S               L  L++Q   VGV  +PVV+L +
Sbjct: 3   KLLTATGKLTEGLCIHIGLYASTFAGTVRRMSSRPWHLRMLLQQAEEVGVQSLPVVMLTA 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+A Q      +F AE  +  ++S+  +RE+G +L  +M+AGR G+A  AE+G+M
Sbjct: 63  LFTGMVLALQSYIVFHRFAAESLTGLVVSMSLVRELGPVLVGLMVAGRVGAAFAAELGTM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+ T+  D VR LI PR+ A+ + +PLL ++A+F  I G   +     D   +
Sbjct: 123 RVTEQIDALWTLSTDPVRYLIMPRLIAVTLMMPLLVVVADFIGIYGGYAISIYLLDQNPS 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           V+         L++ +TGL+KA F    IGI+   EGF     +  +G   T  VV S  
Sbjct: 183 VYIENTTQYMELSDFYTGLVKAGFFGILIGIIGCTEGFNCKGGAAGVGTATTRAVVISCM 242

Query: 356 IVIIIDSLFAIFYFA 370
            ++I D     + FA
Sbjct: 243 SILISDYFLTAWMFA 257


>gi|91206155|ref|YP_538510.1| ABC transporter permease protein [Rickettsia bellii RML369-C]
 gi|157826543|ref|YP_001495607.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389]
 gi|122425169|sp|Q1RGU3|Y1340_RICBR RecName: Full=Probable ABC transporter permease protein RBE_1340
 gi|91069699|gb|ABE05421.1| ABC transporter permease protein [Rickettsia bellii RML369-C]
 gi|157801847|gb|ABV78570.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389]
          Length = 259

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 130/252 (51%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G     +     S  +   +   +I+Q+ ++G   +PVV + +F +G
Sbjct: 8   SIGKRTIRLAQSIGKFSIFSLAAITSIIRPPLYFSLIIKQLLFIGFYSLPVVAMTTFFSG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEIG+M++ E
Sbjct: 68  AVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIGTMRVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D ++ L+ P++ A II++P L ++ +   ++G  +V     D   + + +
Sbjct: 128 QVDALYTLSTDSIKYLVFPKVIAAIITMPCLVLIGDVIGVMGGYLVGVYKLDFNSSTYLT 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I
Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247

Query: 360 IDSLFAIFYFAI 371
            + L    +F +
Sbjct: 248 SNYLITELFFKV 259


>gi|85858832|ref|YP_461034.1| organic solvents resistance ABC transporter permease [Syntrophus
           aciditrophicus SB]
 gi|85721923|gb|ABC76866.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Syntrophus aciditrophicus
           SB]
          Length = 259

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 74/250 (29%), Positives = 124/250 (49%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       +G +I       A +++    L  + +QM +VGV  + VV+L    TG
Sbjct: 10  SLGRRILHGVEEMGRIILLFLSVVAWTFRPPLRLRLIFKQMEFVGVKSIFVVVLTGAFTG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG      F AE      +++   RE+G +LT++M+  R+GSA+ AE+G+M++ E
Sbjct: 70  MVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTSLMVTARAGSAMAAELGTMRVTE 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  M  + ++ LI PR+ A I+ LPLLT++++F  I+G   V     +I   VF  
Sbjct: 130 QIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFVGILGGYFVGVSVLNINEGVFVK 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L +I+ GLIKA      + ++   +GF     +  +G+  T  VV S   +++
Sbjct: 190 NITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGRATTEAVVLSSISILV 249

Query: 360 IDSLFAIFYF 369
            D       F
Sbjct: 250 GDYFLTAIMF 259


>gi|157964160|ref|YP_001498984.1| ABC transporter permease protein [Rickettsia massiliae MTU5]
 gi|157843936|gb|ABV84437.1| ABC transporter permease protein [Rickettsia massiliae MTU5]
          Length = 264

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 129/252 (51%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G     +    +S  +   +L  +IRQ+  +G   +PVV + +F +G
Sbjct: 13  SVGKRTIKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLLIGFHSLPVVAMTTFFSG 72

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEI +M++ E
Sbjct: 73  AVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 132

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V     D   A + +
Sbjct: 133 QVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 192

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I
Sbjct: 193 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 252

Query: 360 IDSLFAIFYFAI 371
            + L    +F +
Sbjct: 253 SNYLITELFFKV 264


>gi|157803278|ref|YP_001491827.1| ABC transporter permease protein [Rickettsia canadensis str.
           McKiel]
 gi|157784541|gb|ABV73042.1| ABC transporter permease protein [Rickettsia canadensis str.
           McKiel]
          Length = 259

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 127/252 (50%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G     +    +S  +   +   +IRQ+ ++G   +PVV + +F +G
Sbjct: 8   AVGKRTIKFAQNIGSFSLFSFAAVSSIIRPPLYFSLIIRQLLFIGFYSLPVVTMTTFFSG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEI +M++ E
Sbjct: 68  AVLALQSYNGFSRFSAESSIATVVVLSLTRELGPVLVGLMVAGRVGASIAAEIATMRVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D ++ L+ PR+   ++++P L ++ +   ++G  +V           + +
Sbjct: 128 QVDALYTLSTDPIKYLVFPRVITAMLTMPCLVLIGDVIGVMGGYLVGVYKLGFNSTAYLT 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I
Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247

Query: 360 IDSLFAIFYFAI 371
            + L    +F +
Sbjct: 248 SNYLITELFFKV 259


>gi|258543490|ref|YP_003188923.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256634568|dbj|BAI00544.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637626|dbj|BAI03595.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640678|dbj|BAI06640.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643735|dbj|BAI09690.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646790|dbj|BAI12738.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649843|dbj|BAI15784.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652831|dbj|BAI18765.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655887|dbj|BAI21814.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 385

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 10/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+      G W        A              +  +D + +   D+     +   
Sbjct: 24  TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPVEPGHTLHIDTTGLKGWDSAFVAFLWDV 80

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            +                    L++       +  +P R+      + +   +G   +K 
Sbjct: 81  KQAASKAQLHFDEQNLPAPAQRLLALLPDAPAEPAQPPRNT-----EGIFARVGDATLKG 135

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + ++ + + +         +        +     L+  ++  G   + +V +++F+ GA+
Sbjct: 136 LTETGTVSELALETAKGATQAVRGKSAMRM--KDLLLDIWNAGPDALLIVGIVNFLVGAI 193

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  G  +L +F AEI+  DL+ I   REI  ++TA+++AGR+G A  A I +M  NEEI
Sbjct: 194 LAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGNEEI 253

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++  G+     ++ P I +L + +PLL +     AI G   V     D+    ++   
Sbjct: 254 DALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYWIST 313

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L     G IK+ F A  I + A + G   G  +  +G   T  VV  I  +I +D
Sbjct: 314 FDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGVAATRAVVIGIVGIIAMD 373

Query: 362 SLFAIFYFAIGI 373
           ++FA+   A+GI
Sbjct: 374 AIFAVIANALGI 385


>gi|28898136|ref|NP_797741.1| putative ABC transport system permease [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153836560|ref|ZP_01989227.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|260366435|ref|ZP_05778874.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
 gi|260878481|ref|ZP_05890836.1| ABC-type transport system, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897062|ref|ZP_05905558.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|260901858|ref|ZP_05910253.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|28806350|dbj|BAC59625.1| putative ABC transport system permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149750158|gb|EDM60903.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|308087695|gb|EFO37390.1| ABC transporter, permease protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308091102|gb|EFO40797.1| ABC-type transport system, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308108149|gb|EFO45689.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
 gi|308113110|gb|EFO50650.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
          Length = 357

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 11/354 (3%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75
            S  + ++ +     +     S   +V+ S +T +D  G   +     ++        + 
Sbjct: 15  TSAMVGDLWEKANDILESYPDSP-IVVNASNLTFVDISGVAFLSDLQTRFRPPGAEISII 73

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
                L  L+  ++ +                      +G    + +    S    +   
Sbjct: 74  GLSASLAELVPPSNIENAPQIPRGED-------GFFERVGNATREMLVYVGSVVRFIKEC 126

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +         + +      ++       G   VP+++LI F+ G +IA +      QFGA
Sbjct: 127 VLVF--KLGINRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQFGA 184

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
            +F  D + I   RE+G L+TA++ AGR+G+A  AEIG+ K+NEEI+A+ T G+  V  L
Sbjct: 185 VLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPVEFL 244

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI+A ++ LPLLT+LA+   ++G ++V    +DI F  ++ +  +  ++ ++F GLI
Sbjct: 245 VIPRIYASVLVLPLLTVLADIIGVLGGALV-LLKFDISFVQYYHQLLNALSVWDLFFGLI 303

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           KA      I ++  + G A G  S S+G   T+ VV SI  +++ID  F +   
Sbjct: 304 KATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT 357


>gi|15892052|ref|NP_359766.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7]
 gi|34580917|ref|ZP_00142397.1| ABC transporter permease protein [Rickettsia sibirica 246]
 gi|229586334|ref|YP_002844835.1| ABC transporter permease protein [Rickettsia africae ESF-5]
 gi|81528535|sp|Q92JD8|Y129_RICCN RecName: Full=Probable ABC transporter permease protein RC0129
 gi|15619171|gb|AAL02667.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7]
 gi|28262302|gb|EAA25806.1| ABC transporter permease protein [Rickettsia sibirica 246]
 gi|228021384|gb|ACP53092.1| ABC transporter permease protein [Rickettsia africae ESF-5]
          Length = 259

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/252 (26%), Positives = 130/252 (51%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G     +    +S  +   +L  +IRQ+ ++G   +PVV + +F +G
Sbjct: 8   SVGKRTVKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEI +M++ E
Sbjct: 68  AVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V     D   A + +
Sbjct: 128 QIDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I
Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247

Query: 360 IDSLFAIFYFAI 371
            + L    +F +
Sbjct: 248 SNYLITELFFKV 259


>gi|212702437|ref|ZP_03310565.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098]
 gi|212674098|gb|EEB34581.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098]
          Length = 375

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/370 (21%), Positives = 152/370 (41%), Gaps = 7/370 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
                   +G+W             +   +        +  +++   D+     ++   +
Sbjct: 13  GERLQVTVSGSWAINTPWPPQCADALQQLQGPGIRQLHLAAASLDAWDSSLLVFLVQLHK 72

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
                          + L + ++              +   +  + L   +G  ++    
Sbjct: 73  AASAARIEI-----SQDLPAGLARLLHLAFAIPAQAGAARSDHRQGLFARVGGAVMSLPP 127

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   LG V  +           +      +  MY  GV  +P++ + S + G ++A
Sbjct: 128 RCADFLEFLGDVTLSIWRLILGRAGMRMQ--DFVEAMYECGVRALPIISITSLLFGLILA 185

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             GA QL+QFGA+I+   L+ I  LR +G ++  V+++GR G+A  A IG+M++NEE+DA
Sbjct: 186 FVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAAMIGTMQVNEEVDA 245

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           + T+G+  +  L+ PR+ AL+  +PLLT+ A+   I+G  +V      +  A + +    
Sbjct: 246 LTTLGISPIDFLVLPRMLALMFMVPLLTVYADLMGILGGYVVGVSMLGLSSAEYLNATMQ 305

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +   G+         I +    +G   G  + ++G   TT VVQSI  +II  ++
Sbjct: 306 MVSFVHGLIGIAYGTVFGVIIALAGCYQGIRCGRSAQAVGLATTTAVVQSIVGIIIATAI 365

Query: 364 FAIFYFAIGI 373
             I    +GI
Sbjct: 366 ITIICNVLGI 375


>gi|157825268|ref|YP_001492988.1| ABC transporter permease protein [Rickettsia akari str. Hartford]
 gi|157799226|gb|ABV74480.1| ABC transporter permease protein [Rickettsia akari str. Hartford]
          Length = 259

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 131/251 (52%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +   A  +G     +    +S+ +   +L  +IRQ+ ++G   +PVV + +F +GA
Sbjct: 9   VGKRTIKCAQSVGSFSLFSFAAVSSTIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSGA 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q     S+F AE     ++ +   RE+G +L  +M++GR G++I AEI +M++ E+
Sbjct: 69  VLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLMVSGRVGASIAAEIATMRVTEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+ T+  D ++ L+ PR+ A I+++P L ++ +   ++G  +V     D     + + 
Sbjct: 129 VDALYTLSTDPIKYLVFPRVIATIVTMPCLVLIGDIIGVMGGYLVGVYKLDFNSTAYLTS 188

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  I++I 
Sbjct: 189 TLHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSIIILIS 248

Query: 361 DSLFAIFYFAI 371
           + L    +F +
Sbjct: 249 NYLITELFFKV 259


>gi|157828003|ref|YP_001494245.1| ABC transporter permease protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165932699|ref|YP_001649488.1| ABC transporter permease [Rickettsia rickettsii str. Iowa]
 gi|157800484|gb|ABV75737.1| ABC transporter permease protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165907786|gb|ABY72082.1| ABC transporter permease protein [Rickettsia rickettsii str. Iowa]
          Length = 259

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 130/252 (51%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G     +    +S  +   +L  +IRQ+ ++G   +PVV + +F +G
Sbjct: 8   SVGKRTVKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEI +M++ E
Sbjct: 68  AVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V     D   A + +
Sbjct: 128 QVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I
Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247

Query: 360 IDSLFAIFYFAI 371
            + L    +F +
Sbjct: 248 SNYLITELFFKV 259


>gi|258404804|ref|YP_003197546.1| hypothetical protein Dret_0676 [Desulfohalobium retbaense DSM 5692]
 gi|257797031|gb|ACV67968.1| protein of unknown function DUF140 [Desulfohalobium retbaense DSM
           5692]
          Length = 256

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/250 (28%), Positives = 130/250 (52%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +      +G +    G  C    +    +    +QM +VGV    VVIL    TG
Sbjct: 7   ALGAGTMRGLQQMGQMALLLGSACGWLLRRPFRIRLFFKQMEFVGVHSGFVVILTGLFTG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +    F AE      +++   RE+G ++TA+M+ GR+GSA+ AEIG+M++ E
Sbjct: 67  MVLALQTYYAFRMFSAESLVGATVALSMTRELGPVITALMVTGRAGSAMAAEIGTMRVTE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+  M ++ V+ L++PR+ A ++ LPLLT++++F  I G  +V  K   I  ++F +
Sbjct: 127 QVDALEVMAINPVQYLVTPRLLAGMVMLPLLTVISDFVGIAGGYLVGVKMLGINSSMFMN 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           + +    L++I+ GL KA      + +V   +GF     +  +G+  T  VV +  ++++
Sbjct: 187 KIYDLLELSDIYNGLTKAVVFGLILTLVGCYKGFYTSGGAEGVGRSTTQAVVLASVLILM 246

Query: 360 IDSLFAIFYF 369
            D +     F
Sbjct: 247 SDYILTALMF 256


>gi|281356267|ref|ZP_06242760.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317636|gb|EFB01657.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
          Length = 272

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 136/269 (50%), Gaps = 2/269 (0%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
            +    S K L   +    +   +D C        +   T +      K + +   +   
Sbjct: 2   NARSPRSLKQLCIEVADSAIALRDDLCLFCTFSRQLGKATLDAIRHPRKIRRY--DVYYY 59

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           M   G   +P++ L+ F+ G ++A Q   QL +FG E + ++L+  + + E+  L+TAV+
Sbjct: 60  MDNCGSDAMPIIALLGFLIGVILAFQAIVQLRRFGVESYVVNLVGTVIVTELAPLVTAVV 119

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +AGR+GS+  AE+G+MK +EEIDA+ TMG D  R L+ P++ AL++ +P LTI+++   I
Sbjct: 120 LAGRTGSSFAAELGTMKADEEIDAMVTMGFDPGRFLLFPKMLALLLIMPGLTIISDVCGI 179

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
            G  +++     +    + ++        ++  GL+K+   A  +  +   +G     ++
Sbjct: 180 AGGMVIVCSMLQVSTGEYLTKTFEIIQPIDLAQGLVKSFVFAVIVAGIGCMKGLNAERNA 239

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
             +G+  T+ VV SI ++++ D++    +
Sbjct: 240 QGVGRSATSAVVTSIFLIVVTDAILTSCF 268


>gi|148261999|ref|YP_001236126.1| hypothetical protein Acry_3017 [Acidiphilium cryptum JF-5]
 gi|146403680|gb|ABQ32207.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5]
          Length = 362

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 169/368 (45%), Gaps = 19/368 (5%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
              V    G   +  ++E     +     +       +DLS    IDT GA L++     
Sbjct: 13  DGPVIALTGPLTAAALTEAWPRAIAVARAA--QGVMTLDLSRAARIDTSGAALLLALERG 70

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           + G+ + QG++   E L + +     +      P R+                    +  
Sbjct: 71  HDGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRT 116

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +    G  I  T    A     +G   +  R     G   +P+VI++ F+ G ++A 
Sbjct: 117 LGVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAF 174

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A  + QFGA+I+   L+S+   RE+G LL AV++AGR+GSA  AE+G+M +NEE+ A+
Sbjct: 175 QSAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAAL 234

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG+D   +L+ PR+ A ++ +P L +  + S ++G   V+      P +   ++    
Sbjct: 235 TTMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMA 293

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++  GL+K+     A+G++  + G   G    ++G+  T+ VV  I   I++D LF
Sbjct: 294 TSPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILLDGLF 353

Query: 365 AIFYFAIG 372
           A+  + +G
Sbjct: 354 AVILYRLG 361


>gi|218679258|ref|ZP_03527155.1| putative transmembrane component of ABC transporter [Rhizobium etli
           CIAT 894]
          Length = 281

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 135/282 (47%), Positives = 189/282 (67%), Gaps = 2/282 (0%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
           ++    +P++    +    +   +GK      ++  +  +ILG  +              
Sbjct: 1   EEPAKPEPEQQEKVSLVARIFAPVGKMTYDLWDNFAASMYILGSAVRGAQMKFGRGSGVS 60

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
               S++ Q+ ++GV  VP+++L+SF+ GA+IAQQGAFQL  FGAE+F +DL+ ILQLRE
Sbjct: 61  P--ASIVNQIDHMGVRAVPIILLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLRE 118

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           IGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLL
Sbjct: 119 IGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLL 178

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
           T+LANF+++ GA+ V W Y  I FA F SR H   TL+ + +G+IKAPFMA  IGIVA  
Sbjct: 179 TVLANFASLAGAAAVAWGYSGITFANFLSRLHEAVTLSTVLSGMIKAPFMALVIGIVAAV 238

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           EG  VG  + SLG+ VT  VV++I +VI++D LFA+FY AI 
Sbjct: 239 EGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAID 280


>gi|283779915|ref|YP_003370670.1| hypothetical protein Psta_2136 [Pirellula staleyi DSM 6068]
 gi|283438368|gb|ADB16810.1| protein of unknown function DUF140 [Pirellula staleyi DSM 6068]
          Length = 289

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/267 (24%), Positives = 121/267 (45%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
                +   +  ++  +          +G +        +          +L+   Y VG
Sbjct: 11  QPPAGILQSLADQVTDWGAVVVDGLITIGDLTIFAMRTISWMLFKLPRRETLLPNFYQVG 70

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  +PV+ L     G V+A Q  F     G E     ++++  +RE+G +L A M+AGR 
Sbjct: 71  VLSLPVIALTGTFIGMVLAVQSYFTFRDLGLETRMGAVINMTLVRELGPVLAATMLAGRV 130

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G A+ AE+G+M++ E+IDA+ +MG D +  L+ PR  A +  +P LTI+A+F  ++G   
Sbjct: 131 GCAMAAELGTMRVTEQIDALESMGADPIYYLVVPRFLACLFLIPTLTIMADFMGVVGGYF 190

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                  I    ++          ++F+G++K+ F   AI +V+   GF     +  +G+
Sbjct: 191 YSTVVLSIDKHHYWYNSEQFVGNFDLFSGILKSLFFGAAIAVVSCYRGFHCTPGAEGVGR 250

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371
             T   V S  ++++ID       + +
Sbjct: 251 AATAAFVHSFVLILVIDLFLGKMLYTL 277


>gi|303256383|ref|ZP_07342397.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|331001491|ref|ZP_08325109.1| hypothetical protein HMPREF9439_02780 [Parasutterella
           excrementihominis YIT 11859]
 gi|302859874|gb|EFL82951.1| ABC transporter, permease protein [Burkholderiales bacterium
           1_1_47]
 gi|329568220|gb|EGG50037.1| hypothetical protein HMPREF9439_02780 [Parasutterella
           excrementihominis YIT 11859]
          Length = 354

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 13/348 (3%)

Query: 26  DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLI 85
            +   +  +  S   I D S +T  D  G  L+     +     KL  VS  IE L++ +
Sbjct: 20  KIWEQVLGAESSGQTIFDASDLTFCDESGLTLLYELRSR-PDAFKLINVSASIETLYNTM 78

Query: 86  SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145
                 K   +K            +   +GK +    + +      LG       +    
Sbjct: 79  LKNFSPKPVEKKS---------LGVVSSLGKWLYDAASSTKQSIIFLGSACCALTDVLLH 129

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
             + +     ++      G   V ++ LI F+ G +IA + A     FGA IF ++ + I
Sbjct: 130 PSQIR--FGEILSVSDEAGSRAVGIICLIGFLMGVIIAFETALVAQIFGAVIFVVNGIGI 187

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
              RE+G L+TA++ AGRSGSA  A++G+ K+NEE++A+ T GL  +  L+ PR+ A  +
Sbjct: 188 AMTRELGPLMTAILFAGRSGSAFAAQLGTQKVNEELNALTTFGLSPMYFLVVPRLIASSL 247

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
            +PLL++ A    I+G  +V+   YDI +  F+ +   + T+ +I  GL+KA      I 
Sbjct: 248 VVPLLSVFATILGILGGGLVM-AMYDITYTQFYVQLLKSVTVTDIVFGLVKAVIFGFVIA 306

Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           ++  + G   G  + ++G   T  VV+SI  +++ID   A+    +GI
Sbjct: 307 LIGCQCGMNTGAGAAAVGSSTTKSVVKSIIWIVVIDGAAALLTNRLGI 354


>gi|149200416|ref|ZP_01877432.1| ABC-type transport system, permease component [Lentisphaera
           araneosa HTCC2155]
 gi|149136485|gb|EDM24922.1| ABC-type transport system, permease component [Lentisphaera
           araneosa HTCC2155]
          Length = 265

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 2/265 (0%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            KNL    G+  V F  +S +    +G V         + +K K    S +  M   G  
Sbjct: 1   MKNLVSSFGRNFVGFFQESKNILAFIGEVTEELIFGIRNPHKIK--WKSTLYYMDGCGRE 58

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              +V LI F+ G ++  Q A Q+ QFG +I+  +L+ +  ++E+G L+ A++  GR+GS
Sbjct: 59  ATGIVALICFLMGLILGFQSAVQMKQFGTDIYVANLVGLSIVKELGPLMVAMIATGRAGS 118

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A  AE+G+M++NEEIDA+ TMG    R LI P++ A+++ +P+LT++ +   I+G   V 
Sbjct: 119 AFAAELGTMRVNEEIDALTTMGFVPPRFLIIPKLIAMMVVMPILTLIGDLLGILGGFFVG 178

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +PF  + ++        ++   + KA   A  I +V    G      +  +GK  
Sbjct: 179 VVQLKLPFIAYLNQTIKAIHYLDVMESMAKAFAFAIIISMVGCYRGMNSSSDAQGVGKAA 238

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
           T+ VV  I ++I+ D+L  I +  +
Sbjct: 239 TSSVVSGIFLIIVADTLMTIIFTQL 263


>gi|239947145|ref|ZP_04698898.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921421|gb|EER21445.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 261

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 130/254 (51%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G          +S  +   +L  +IRQ+ ++G   + VV + +F +G
Sbjct: 8   SVGKRTIKFAQSVGSFSLFIFAAVSSIIRPPLYLSLIIRQLLFIGFHSLSVVAMTTFFSG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEI +M++ E
Sbjct: 68  AVLALQSYTGFSRFSAESSIATVVILSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V     D   A + +
Sbjct: 128 QVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I
Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247

Query: 360 IDSLFAIFYFAIGI 373
            + L    +F + I
Sbjct: 248 SNYLITELFFKVQI 261


>gi|238650558|ref|YP_002916410.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic]
 gi|238624656|gb|ACR47362.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic]
          Length = 259

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 130/252 (51%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +   A  +G     +    +S  +   +L  +IRQ+ ++G   +PVV + +F +G
Sbjct: 8   SVGKRTVKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G++I AEI +M++ E
Sbjct: 68  AVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D ++ L+ PR+   II++P L ++ +   ++G  +V     D   A + +
Sbjct: 128 QVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV +  +++I
Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNASILILI 247

Query: 360 IDSLFAIFYFAI 371
            + L    +F +
Sbjct: 248 SNYLITELFFKV 259


>gi|226939556|ref|YP_002794629.1| ABC transport system permease protein [Laribacter hongkongensis
           HLHK9]
 gi|226714482|gb|ACO73620.1| putative ABC transport system permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 371

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 10/360 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G   +  +  I  + + A+    Q+    +D SA+T++D+ G  L+   +      
Sbjct: 16  LRLEGPLTTHSVGSIWAEALAALAAQPQTP-LTLDASAVTQLDSAGLVLLHRLLHDPRPA 74

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                +S    +   L+       +               +    IG   +  ++     
Sbjct: 75  SAPVALSGLAAEYQPLLERIRTASL------TPPASPPPLSPVERIGAATLSGLHTGRDS 128

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   S          + +G    ++  M   G   +P+V+LI F+ G ++A Q   
Sbjct: 129 VVWTGASASALWRALCRPARLEG--ARVLDIMASAGTQALPIVLLIGFLMGTILAFQMGL 186

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
               FGA +  ++ + I  LRE+G L+TA++ AGRSG+A  AE+G+ K+NEEI A+ T G
Sbjct: 187 VAQGFGAGLLVVNGIGIAMLRELGPLMTAIVFAGRSGAAFAAELGTQKVNEEIYALHTFG 246

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D V  L+ PR+ A ++ LPLLT+LA+   ++G ++V+  +  +    F+ +  +T +L 
Sbjct: 247 IDPVAFLVLPRLVAAVLVLPLLTVLADVIGLLGGALVMQAF-SVTPMQFYHQTLATVSLT 305

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +++ GL K+      I  +  ++G + G    ++G   T  VV S+  +++ID LFA   
Sbjct: 306 DLYFGLGKSMVFGLFIAQIGCRQGLSAGQGPTAVGVAATRAVVSSLIWIVVIDGLFAALL 365


>gi|51473253|ref|YP_067010.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington]
 gi|81390296|sp|Q68XW4|Y041_RICTY RecName: Full=Probable ABC transporter permease protein RT0041
 gi|51459565|gb|AAU03528.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington]
          Length = 259

 Score =  205 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 67/251 (26%), Positives = 131/251 (52%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +   A  +G+    +    +S  K   +L  ++RQ+ ++G   +PVV + +F +GA
Sbjct: 9   VGKHTIKFAQSVGIFALFSFIAISSIIKPPLYLSLIMRQLLFIGFHSLPVVAMTTFFSGA 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q     S+F AE     ++ +   RE+G +L  +++AGR G++I AEI +MK+ E+
Sbjct: 69  VLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGASIAAEIATMKVTEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+ T+  D ++ L+ PR+ A II++P L ++ +   ++G  +V     +     + + 
Sbjct: 129 VDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDVIGVMGGYLVGIYKLNFNSTAYLTS 188

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L ++ +GL+KA      I I++   G+  G  +  +G+  T+ VV S  +++I 
Sbjct: 189 TFQYLELIDVISGLVKATVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILIS 248

Query: 361 DSLFAIFYFAI 371
           + L     F +
Sbjct: 249 NYLITELLFKV 259


>gi|329113573|ref|ZP_08242353.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326697095|gb|EGE48756.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 385

 Score =  205 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 155/375 (41%), Gaps = 16/375 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+      G W        A              +  ++ +++   D+     +   
Sbjct: 24  TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPIEPGHTLHINTTSLKNWDSAFVAFLWDV 80

Query: 62  ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118
            +   K       Q +    ++L +L+     +  +  +            +   +G   
Sbjct: 81  KQAASKAQLHFDEQNLPAPAQRLLALLPDAPAEPAQPPRNNE--------GIFARVGDMT 132

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  + ++ + + +         +        +     L+  ++  G   + +V +++F+ 
Sbjct: 133 LNGLTETGTVSELALDTAKGAAQAVRGKSAMRM--KDLLLDIWNAGPDALLIVGIVNFLV 190

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A  G  +L +F AEI+  DL+ I   REI  ++TA+++AGR+G A  A I +M  N
Sbjct: 191 GAILAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGN 250

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA++  G+     ++ P I +L + +PLL +     AI G   V     D+    ++
Sbjct: 251 EEIDALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYW 310

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                   L     G IK+ F A  I + A + G   G  +  +G   T  VV  I  +I
Sbjct: 311 ISTFDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGIAATRAVVIGIVGII 370

Query: 359 IIDSLFAIFYFAIGI 373
            +D++FA+   A+GI
Sbjct: 371 AMDAIFAVIANALGI 385


>gi|326405508|ref|YP_004285590.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325052370|dbj|BAJ82708.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 362

 Score =  205 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 19/368 (5%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
              V    G   +  ++E     +     +       +DLS    IDT GA L++     
Sbjct: 13  DGPVIALTGPLTAAALTEAWPRAIAVARAA--QGVMTLDLSRAARIDTSGAALLLALERG 70

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
           + G+ + QG++   E L + +     +      P R+                    +  
Sbjct: 71  HDGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRT 116

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +    G  I  T    A     +G   +  R     G   +P+VI++ F+ G ++A 
Sbjct: 117 LGVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAF 174

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A  + QFGA+I+   L+S+   RE+G LL AV++AGR+GSA  AE+G+M +NEE+ A+
Sbjct: 175 QSAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAAL 234

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMG+D   +L+ PR+ A ++ +P L +  + S ++G   V+      P +   ++    
Sbjct: 235 TTMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMA 293

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A+  ++  GL+K+     A+G++  + G   G    ++G+  T+ VV  I   I+ID LF
Sbjct: 294 ASPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILIDGLF 353

Query: 365 AIFYFAIG 372
           A+  + +G
Sbjct: 354 AVVLYRLG 361


>gi|163797504|ref|ZP_02191455.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199]
 gi|159177253|gb|EDP61812.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199]
          Length = 282

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 114/249 (45%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            +   S    LG +    G       +   +   + RQ   +G   +PVV L +  +G V
Sbjct: 33  GSTFLSFLTALGRLALFAGSAVGHCVRPPIYPRLIGRQFLEIGYYSLPVVGLTTLFSGMV 92

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     ++F AE     ++ +   RE+  +L  +M+AGR G+A+ AEIG+M++ E+I
Sbjct: 93  LALQSYSGFARFSAESAVATVVVLSITRELAPVLAGLMVAGRVGAAMAAEIGTMRVTEQI 152

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  +  + LI+PR+ A  +SLP+L ++ +   + G  +V           +    
Sbjct: 153 DALTTLSTNPFKYLIAPRLIAATLSLPILVLIGDVIGVFGGYVVGVYKLGFNAGNYIQST 212

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  ++ +GL+KA      + ++    G+     +  +G   T  VV +  +++I +
Sbjct: 213 VQFLEQIDVISGLVKAGVFGFIVALMGCYHGYHSRGGAQGVGAATTNAVVTASIMILIAN 272

Query: 362 SLFAIFYFA 370
                 +F 
Sbjct: 273 YAITELFFG 281


>gi|209964880|ref|YP_002297795.1| ABC transporter permease protein, putative [Rhodospirillum centenum
           SW]
 gi|209958346|gb|ACI98982.1| ABC transporter permease protein, putative [Rhodospirillum centenum
           SW]
          Length = 256

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 123/253 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +       G +   T    +   +   +L  + RQM  +G   +PVV L +  
Sbjct: 4   IAGIGRATLVFMEATGRLALFTAIALSHCLRPPFYLRHIGRQMIDIGYYSLPVVGLTALF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F AE     ++ +   RE+G +L  +M+AGR G+A+ AE+G+M++
Sbjct: 64  TGMVLALQSYSGFSRFEAESAIATVVVLSITRELGPVLAGLMVAGRIGAAMAAELGTMRV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+ T+  +  + L+ PR+ A  + LPLL ++A+   + G  +V     +     +
Sbjct: 124 TEQVDALTTLSTNPFKYLVVPRLLAGTLMLPLLVLVADIIGVFGGFLVGVYRLNFNAGGY 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +       + ++ +GL+KA     AI ++    G+     +  +G   T  VV +  ++
Sbjct: 184 ITSTWKYLEVMDVVSGLVKAGAFGFAISLMGCYHGYHSRGGAQGVGAATTNAVVSASILI 243

Query: 358 IIIDSLFAIFYFA 370
           ++++ L    +F+
Sbjct: 244 LVLNYLLTGIFFS 256


>gi|302036233|ref|YP_003796555.1| putative toluene efflux ABC transporter ATP-binding protein
           [Candidatus Nitrospira defluvii]
 gi|300604297|emb|CBK40629.1| ABC transporter, membrane component, putative ATP-dependent toluene
           efflux transporter [Candidatus Nitrospira defluvii]
          Length = 255

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 127/254 (50%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I +    +      +G ++       A   +    +  +++Q+ ++G     VV+L +
Sbjct: 2   EGIARIGRYTIDLTEQMGRMMLFVLSSFAWLTRPPFRVYQIVKQLNFIGYKSTFVVVLTA 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+A QG + L +FG+E      +++  +RE+G +L A+M+  R+GSA+ AEIG M
Sbjct: 62  VFTGMVLALQGHYTLRKFGSEAVLGSAVALSIIRELGPVLAALMVTARAGSAMTAEIGIM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I E+IDA+ TM ++ ++ LI P++ A +I++PLL  L +   I G  +V  +  +    
Sbjct: 122 RITEQIDALDTMAINPLQYLIGPKLVASLIAVPLLVALFDVVGIYGGYVVGVQLLNGNEG 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            ++S   S     +++ G++K+      I  V   +GF     +  LG   T  VV S  
Sbjct: 182 AYWSSIESAVEWKDVYGGILKSISFGLLISWVCCYKGFHTKHSAEGLGTATTEAVVLSAV 241

Query: 356 IVIIIDSLFAIFYF 369
           ++++ D        
Sbjct: 242 LILVWDYFLTSVLL 255


>gi|258593363|emb|CBE69702.1| toluene transporter subunit: membrane component of ABC superfamily
           [NC10 bacterium 'Dutch sediment']
          Length = 247

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 136/244 (55%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG +   T +    +         LIRQ+ ++GV  + +  + +  TG V+A Q A
Sbjct: 1   MLELLGGLSQLTYDTVCCACTPPFNPRELIRQVDHIGVKSISIAGVAAAFTGLVLALQTA 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
           + LS+FGA+ +   ++S+  +RE+G +LTA+++ GR GS I AE+GSMK+ E+IDA+R M
Sbjct: 61  YGLSRFGAKAYVGIIVSLSMVRELGPVLTALLVGGRVGSGITAELGSMKVTEQIDAMRAM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G + V+ L+ PR+ + ++ LPLLT++A+   I+G  ++    + + +  +++      TL
Sbjct: 121 GANPVKKLVVPRVLSTMLVLPLLTVMADILGILGGMVISKYEFQVDYHFYYNTVTRNLTL 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           A+I +GL K       I IV   +G A    +  LGK  T  VV S   VII D     F
Sbjct: 181 ADIVSGLGKTVVFGFIIAIVGCYKGLATVGGTEGLGKATTATVVTSAIAVIISDFFLTKF 240

Query: 368 YFAI 371
           ++ +
Sbjct: 241 FWWL 244


>gi|325294995|ref|YP_004281509.1| hypothetical protein Dester_0809 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065443|gb|ADY73450.1| protein of unknown function DUF140 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 260

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 130/258 (50%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +      + +     G  +  + +    +++        + Q+  +G   +PV+ + S
Sbjct: 3   KLLEAIGRVTINFLEFWGSWLIISVKAIVLAFRKPIRFKHYLYQLASIGTGSLPVIAITS 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG VIA +      +F AE     +++I   RE+G +LTA++I  RSGSA+ AEIG+M
Sbjct: 63  LFTGGVIALETYEAFHRFNAEYMIGGVVAISMARELGPVLTALLITARSGSAMAAEIGTM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+R M ++ ++ LI+PR++  +I++ LLTI+++    IG  IV    ++I   
Sbjct: 123 KVTEQIDALRMMAVNPIKYLITPRVYTSVIAVTLLTIISDIVGYIGGYIVSVVVFNINKT 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++     + A + +++ GLIKA      I  ++   G+     +  +G+  T  VV S  
Sbjct: 183 LYIRYTQNLAEMNDVYHGLIKAAIFGFLIATISCLYGYFTKGGAKGVGESTTKAVVVSSI 242

Query: 356 IVIIIDSLFAIFYFAIGI 373
            ++I D L         +
Sbjct: 243 SILIFDYLITFILRFFDL 260


>gi|114769304|ref|ZP_01446930.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           HTCC2255]
 gi|114550221|gb|EAU53102.1| ABC transporter, inner membrane subunit [alpha proteobacterium
           HTCC2255]
          Length = 259

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 120/254 (47%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +    +   +    +G ++           +   +   ++ Q+  +G   +PVV L +
Sbjct: 6   KLLRSIGSSVLAFCSSVGRIVIFALNAILHLVRPPFYGREVLSQLMQIGFYSLPVVGLTA 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TGA +A Q      +F AE     +++I  +RE+G +L  +M+AGR  S+I AE+G+M
Sbjct: 66  LFTGAALALQIYSGGVRFSAESVVPSIVAIGMVRELGPVLGGLMVAGRVSSSIAAELGTM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E++DA+ T+  D ++ L++PR+ A  I++P+L  + +   I+G  +V          
Sbjct: 126 RVTEQLDALVTLSTDPMKYLVAPRVLAATIAMPILVAVGDTIGILGGYLVGTGRLGFNSN 185

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +         L +I +GL KA      I ++    G+  G  +  +GK     VV +  
Sbjct: 186 NYLQNTVDFMELEDITSGLAKAAVFGFIIALMGCYHGYNSGRGAQGVGKATINAVVSASV 245

Query: 356 IVIIIDSLFAIFYF 369
           +++  + +    +F
Sbjct: 246 MILAANYVLTEAFF 259


>gi|118579001|ref|YP_900251.1| hypothetical protein Ppro_0562 [Pelobacter propionicus DSM 2379]
 gi|118501711|gb|ABK98193.1| protein of unknown function DUF140 [Pelobacter propionicus DSM
           2379]
          Length = 256

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 128/252 (50%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I    + +      LG +         +  +  G  + +++Q+ ++G   + V+ L +  
Sbjct: 5   IQAIGHSTIGSIRALGRMGWFLVHSFITMVRTPGNPVHVLKQLSFIGAKSLFVIFLTAAF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG + L++FG+E      +++  +RE+G +LTA+M+ GR+GSAI AEIG M+I
Sbjct: 65  TGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLTALMVTGRAGSAIAAEIGIMRI 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ TM LD  + LI+P++ A +I+LPLL  + +   I G  +V  K   +    +
Sbjct: 125 TEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIFDTIGIYGGWLVGVKLLGVNPGAY 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           FS    +    ++++G  K+      I  +   +G+  G  +  + K  T  VV +  ++
Sbjct: 185 FSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKATTEAVVLTSVLI 244

Query: 358 IIIDSLFAIFYF 369
           ++ D        
Sbjct: 245 LVWDYFLTSVLL 256


>gi|83311193|ref|YP_421457.1| ABC-type transport system involved in resistance to organic
           solvents [Magnetospirillum magneticum AMB-1]
 gi|82946034|dbj|BAE50898.1| ABC-type transport system involved in resistance to organic
           solvents [Magnetospirillum magneticum AMB-1]
          Length = 258

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 119/250 (47%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                 +    +G + + T    + + +   +   ++R+   +G   +PVV L +  TG 
Sbjct: 8   VGRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFIEIGYFSLPVVGLTAVFTGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q     S+F AE     ++ +   RE+  +L  +M+AGR G+++ AEIG+M++ E+
Sbjct: 68  VLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRVTEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T+  +  + L++PRI A  + LP L ++A+   + G  IV         A + +R
Sbjct: 128 IDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVGVYKLGFNSATYIAR 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++ +GL KA      I ++    G+     +  +G   T  VV +  ++++ 
Sbjct: 188 TWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSAAIMILVF 247

Query: 361 DSLFAIFYFA 370
           + +    +F 
Sbjct: 248 NYVITAMFFG 257


>gi|328953206|ref|YP_004370540.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453530|gb|AEB09359.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 256

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 137/263 (52%), Gaps = 7/263 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            K+L   +G+  + FI ++       G +     +     +       +L++Q+Y +GV 
Sbjct: 1   MKDLLRTLGRATIDFIQEA-------GRMQLFLFQTLGLFFLPPYKPFNLVKQVYVIGVR 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
              +++L +  TG V+  QG + L +FGAE      +++  +RE+G +LTA+M+ GR+GS
Sbjct: 54  SSSIILLTAMFTGMVLGLQGYYTLRKFGAESALGSAVALSLIRELGPVLTALMVTGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG M+I E++DA+ TM ++ ++ ++ P++ A +I++PLLT   +F  I+G  +V 
Sbjct: 114 AITAEIGIMRITEQLDALDTMAINPMQYVVMPKVIAGLIAVPLLTAFFDFVGIVGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +    +FS    +    ++  G +K+      + +VA  +G+     +  + +  
Sbjct: 174 VVMLGVSSGSYFSGMIQSVETLDVNGGFVKSIVFGLTVTLVACYKGYFTSHGAEGVSQST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV +  +++  D +   F+ 
Sbjct: 234 TEAVVLAAILILGWDYVLTSFFM 256


>gi|108762257|ref|YP_631903.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
 gi|108466137|gb|ABF91322.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
           1622]
          Length = 271

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 125/254 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + +F          LG +I+   +    S +    L++L  Q+ +VGV  + +V L  
Sbjct: 18  QAVTRFGQGLIDIVSTLGGIITMGLDVFRWSVRRPFRLVNLFAQLDFVGVGSIFIVSLTG 77

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V A Q +     F AE      +++   RE+  + +A+M+  R+GSA+  E+G+M
Sbjct: 78  TFTGMVFALQTSTAFQLFDAESLVGPTVALTLTRELAAVFSALMVTMRAGSAMCTELGTM 137

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E++DA+ TM ++ V+ L+ PR+ A +  +P LT+L N   + GA +V      I   
Sbjct: 138 RVTEQVDALETMAVNPVQYLLVPRVLAGLFMVPALTMLFNTMGMGGAYVVAVGGLGISPG 197

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F SR        +IF GL+K      ++ ++   +GF     +  +G+  T  +V S  
Sbjct: 198 TFLSRTQQWLAPEDIFQGLLKGAVFGLSVSLICCFKGFNASGGAKGVGQATTEAMVASAL 257

Query: 356 IVIIIDSLFAIFYF 369
            + I+D +  I +F
Sbjct: 258 SIFILDFILGILFF 271


>gi|15223672|ref|NP_173410.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|42571555|ref|NP_973868.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|42571557|ref|NP_973869.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter
           [Arabidopsis thaliana]
 gi|75153743|sp|Q8L4R0|TGD1_ARATH RecName: Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic;
           AltName: Full=ABC transporter I family member 14;
           Short=ABC transporter ABCI.14; Short=AtABCI14; Flags:
           Precursor
 gi|20465620|gb|AAM20141.1| unknown protein [Arabidopsis thaliana]
 gi|21281062|gb|AAM45069.1| unknown protein [Arabidopsis thaliana]
 gi|45680900|gb|AAS75319.1| permease-like protein [Arabidopsis thaliana]
 gi|222424205|dbj|BAH20061.1| AT1G19800 [Arabidopsis thaliana]
 gi|332191778|gb|AEE29899.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
 gi|332191779|gb|AEE29900.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
 gi|332191780|gb|AEE29901.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana]
          Length = 350

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 113/232 (48%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + + F+F 
Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340


>gi|115379773|ref|ZP_01466845.1| ABC-type transport system involved in resistance to organic
           solvents [Stigmatella aurantiaca DW4/3-1]
 gi|310821468|ref|YP_003953826.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
 gi|115363220|gb|EAU62383.1| ABC-type transport system involved in resistance to organic
           solvents [Stigmatella aurantiaca DW4/3-1]
 gi|309394540|gb|ADO71999.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 272

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 60/252 (23%), Positives = 120/252 (47%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I  F   + +    +G V     +    ++K          Q+ +VGV  + +V L  
Sbjct: 18  QAIENFGKGTIAVVSDVGGVAYLGFQVLRWAFKRPFRPQIFFSQLDFVGVGSIFIVALTG 77

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V AQQ +   + F AE      +++   RE+  + +A+M+  R+GS++  E+G+M
Sbjct: 78  LFTGMVFAQQVSTAFALFDAESLVGPTVALTLSRELAPVFSALMVTMRAGSSMCTELGTM 137

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E++DA+ TM ++ V+ L+ PR+ + +I  P+LT+L   S + GA ++     +    
Sbjct: 138 RVTEQVDALETMAVNPVQYLLVPRVLSGLIMGPVLTMLFFTSGMSGAYMISVFVQNTSAG 197

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F SR        +++ G +K       I ++   +G+     +  +G+  T  +V S  
Sbjct: 198 TFISRTQQWMEPLDLYEGTLKGAVFGLTITLICCYKGYNASGGAKGVGQATTEAMVSSAL 257

Query: 356 IVIIIDSLFAIF 367
            + I+D +  + 
Sbjct: 258 AIFILDFIIGVL 269


>gi|291532196|emb|CBL05309.1| conserved hypothetical integral membrane protein [Megamonas
           hypermegale ART12/1]
          Length = 256

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG+ ++  +        ++G  I+          ++   +  + +QM ++GV 
Sbjct: 2   IIRFFEKIGRFVIGHLETLGQFTILIGNTIAQL--------RYPPRMRHVFQQMSHLGVD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++ L    TG VI  Q A +  + GA+     +++I   RE+G +L  V+ AGR G+
Sbjct: 54  TLPIITLTMLFTGMVITLQTATEFIRLGAQSTVGGIVTIAVGRELGPVLAGVVTAGRVGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEI +MK+ E+IDA++ M  + +  L+ PR+ A +  LP+L +  +    IG  +V 
Sbjct: 114 AITAEISTMKVTEQIDALKVMATNPIGYLVVPRLIACMFMLPILVVFGDVIGSIGGWMVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             YYDI   ++     +   + +I  GL+K+      I IV    G      +  +GK  
Sbjct: 174 E-YYDINIYMYLHSIDTFVDVHDITGGLLKSIVFGAIIAIVGCYYGLNAQNGAEGVGKAT 232

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV SI ++   + L ++  +
Sbjct: 233 TRSVVISIIVIFFSNCLLSMLLY 255


>gi|283853085|ref|ZP_06370341.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283571552|gb|EFC19556.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 274

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 5/273 (1%)

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
              N+       +   I        S    LG +    G+              +++Q+Y
Sbjct: 2   PRPNTMTQALALLLSPIAALGRAVLSLVAELGGLCIFMGKGLWRIVFPSPAWRKIVQQVY 61

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
           ++GV  V V++LI   TG V+  QG + L +FG+E      +++  +RE+G +LTA+MI 
Sbjct: 62  FIGVKSVFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMIT 121

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GR+GS++ AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A ++  PLLT + +   I G
Sbjct: 122 GRAGSSMAAEIGIMRISEQIDALSTMGINPLRFLIAPRLAASLVCFPLLTAIFDVVGIGG 181

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----G 336
             +       I   V+F R  ST  L ++  G +K+   A  +  +   EG+       G
Sbjct: 182 GYLTGVVLLGINPGVYFDRIDSTVELGDVTGGFVKSLVFALLVAAICCFEGYFTHTRREG 241

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +    T+ VV S   +++ D +   F  
Sbjct: 242 FGAKGVSLATTSAVVLSCITILVADYVLTSFLL 274


>gi|126663828|ref|ZP_01734823.1| ABC transporter, permease [Flavobacteria bacterium BAL38]
 gi|126624092|gb|EAZ94785.1| ABC transporter, permease [Flavobacteria bacterium BAL38]
          Length = 261

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 3/255 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             I    +    +G +    G F    +K        +RQ Y++G   + +V +  F+ G
Sbjct: 7   NIIKVIKAFLIEIGEISYFAGRFFKEFWKPPYEFKEFLRQCYFIGNRSLFLVGVTGFIIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q    L +FGA  +   ++S+  +REIG ++TA++ AGR GS I AE+GSMK+ E
Sbjct: 67  LVFTLQSRPTLQEFGAVSWMASMVSVSIIREIGPIITALICAGRIGSGIGAELGSMKVTE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+   G +  + L+  RI A  + LPLL I  +  AI G+ +V     ++ F ++F+
Sbjct: 127 QIDAMEVSGTNPFKYLVITRILATSLMLPLLVIFGDVLAIYGSYLVENVKDNVSFQLYFN 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           +  +    +++    +K  F   AIG++   +G+     +  +GK     VV +  ++ +
Sbjct: 187 QVFNILEFSDLIPATLKTFFFGFAIGLIGCYKGYYCKKGTAGVGKAANEAVVYTSMLLFV 246

Query: 360 IDSL---FAIFYFAI 371
           ID +       ++ +
Sbjct: 247 IDFIAVFVTNIFYDM 261


>gi|23014157|ref|ZP_00053989.1| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 258

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 119/249 (47%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +    +G + + T    + + +   +   ++R+   +G   +PVV L +  TG V
Sbjct: 9   GRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFVEIGYFSLPVVGLTAVFTGMV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     S+F AE     ++ +   RE+  +L  +M+AGR G+++ AEIG+M++ E+I
Sbjct: 69  LALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRVTEQI 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  +  + L++PRI A  + LP L ++A+   + G  IV         A + +R 
Sbjct: 129 DALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVGVYKLGFNSATYIART 188

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  ++ +GL KA      I ++    G+     +  +G   T  VV +  ++++ +
Sbjct: 189 WEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSAAIMILVFN 248

Query: 362 SLFAIFYFA 370
            +    +F 
Sbjct: 249 YIITAMFFG 257


>gi|291287315|ref|YP_003504131.1| hypothetical protein Dacet_1405 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884475|gb|ADD68175.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 256

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 70/249 (28%), Positives = 128/249 (51%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F N      +  G +     +     +     L  LI+Q+ ++G + + V+IL    TG 
Sbjct: 8   FGNPLVRLINATGSMSLMFFDTIRLIFVPPFRLRLLIKQIEFIGANSLSVIILTGSFTGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V A Q      +FGAE     ++++   RE+G +L+A+M+A R+GSAI AEIG+MK+ E+
Sbjct: 68  VFAFQSYIGFHKFGAEQIVGTVVALGMARELGPVLSAIMVAARAGSAITAEIGTMKVTEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +DA+  + +D V+ L  PRI A +I +P+L  +A F  ++G  +V      I   ++ + 
Sbjct: 128 VDALNALAVDPVQYLFVPRILAGLIVMPMLNAIAVFCGMVGGFLVSITVLGINKTLYLNY 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            +     ++ F+G++KA      + +V   +G+     +  +GK  T  VV +  ++++ 
Sbjct: 188 MYQYIEFSDFFSGMVKAFVFGGIVTLVGCYKGYMTTGGAEGVGKSTTESVVLACILILVF 247

Query: 361 DSLFAIFYF 369
           D +   F F
Sbjct: 248 DYILTAFMF 256


>gi|162456584|ref|YP_001618951.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161167166|emb|CAN98471.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 266

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 121/252 (48%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + +    +    +G +++ T +      +        +  M ++G   V +V L    +G
Sbjct: 15  RALEPVLAFLDNIGNIVTLTFQTIVWLVRPPFRPAQFLAAMDFMGAQSVFIVGLTGVFSG 74

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  Q ++ L  F AE     L+++   RE+  + +A+M+  R+GSA+ AE+G+M++ E
Sbjct: 75  MVVTLQTSYALRAFSAEGRVGGLVAVSLARELAPVFSAIMVTARAGSAMAAELGNMRVTE 134

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDAI TMG+  V+ L+SPR++A  + LPLL IL     + G+ +V   +       FF 
Sbjct: 135 QIDAIATMGVSPVQYLLSPRLFAATVMLPLLCILYTSVGMCGSYLVAVLWLGGDEGAFFQ 194

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                A   +I  GLIKA      +  ++ + GF     +  +G   T  VV+S   V++
Sbjct: 195 SIRDFALPKDISMGLIKACVFGFIVSSISCRHGFYASGGARGVGVATTRAVVESCVTVLV 254

Query: 360 IDSLFAIFYFAI 371
            + +       +
Sbjct: 255 TNYILTQLLLDM 266


>gi|319789984|ref|YP_004151617.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1]
 gi|317114486|gb|ADU96976.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1]
          Length = 260

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 7/262 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G+ ++ F           G     + +    ++K    L   I  +  +G  
Sbjct: 1   MVKLLEAVGRWVIAF-------LEFWGRWFLLSAKAVTLAFKPPLRLKRFIYYLATIGSD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV+ + S  TG VIA +      +F AE     +++I   RE+  +L+A+++  RSGS
Sbjct: 54  SIPVIAVTSLFTGGVIALETYNAFHRFNAEFMIGAVVAISMARELSPVLSALLVTARSGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG+M++ E+IDA+  M ++ ++ LI+PRI+A  ISL  LT++A+    IG  +V 
Sbjct: 114 AMAAEIGTMRVTEQIDALEMMAVNPIKFLITPRIYATTISLVFLTVIADIIGYIGGYLVS 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              + +   ++     + A + ++F GLIKA      +  ++   G+     +  +G+  
Sbjct: 174 VHIFGVNKTLYLRYTQNFAHMEDVFHGLIKAAVFGFLLSTISCLYGYYTRGGAKGVGEST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFY 368
           T  VV S   ++I D L     
Sbjct: 234 TKAVVSSSIAILIFDYLITYLL 255


>gi|312898371|ref|ZP_07757761.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620290|gb|EFQ03860.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 264

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            ++L   IG+  +    +    + + G  I             +      I QM ++GV 
Sbjct: 11  LQHLLERIGRFTLHIFEEVGVISVLFGQTIKQM---------PRIRRDLTINQMAHLGVD 61

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
             P+V L     G V+  Q    L ++GA+     +MS+   RE+G +LT V++AGR G+
Sbjct: 62  SFPIVALTMLFAGMVMTLQIVDILMRYGAQSTLGGIMSVAMGRELGPILTGVVVAGRVGA 121

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG+MK+ E+IDA+R M  D V  L+ PR  A +  +PLLT         G   V 
Sbjct: 122 AMTAEIGTMKVTEQIDALRCMATDPVAYLVVPRFVACVFMVPLLTFFGYLIGTGGGYCVA 181

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +    +         ++++  GLIKA      I +VA  EG      +  +G+  
Sbjct: 182 VFSAGLTDYTYMHSIEFFTEISDVLFGLIKAGVFGGIIALVACFEGMHAKSGAEGVGQAT 241

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV SI  + I + + ++  +
Sbjct: 242 TKSVVTSIIFIFITNYILSVILY 264


>gi|154253915|ref|YP_001414739.1| hypothetical protein Plav_3483 [Parvibaculum lavamentivorans DS-1]
 gi|154157865|gb|ABS65082.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans
           DS-1]
          Length = 257

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 120/249 (48%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +    +G +        +   +   F     +QM  +G   +PVV L +F TG  
Sbjct: 8   GRVVLALLGEIGRLSLFVWLSVSHILRPPFFWRLTAQQMLRIGYFSLPVVALTAFFTGGA 67

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q  +  + F +E     ++++   RE+G +L  +M+AGR  +AI AE+G+M++ E+I
Sbjct: 68  LALQIYYGGNSFNSESIVATIVALGITRELGPVLGGLMVAGRVSAAIAAELGTMRVTEQI 127

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  +  + L+ PR+ A +I+LPLL ++A+   I+G  +V     D    V+    
Sbjct: 128 DALTTLSTNPHKYLVVPRVVAAVITLPLLVLVADIIGIMGGYVVGTASLDFNGGVYIKNT 187

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L ++ +GLIKA      I ++    GF     +  +G+  T  VV +  +++  +
Sbjct: 188 ADFLKLDDVTSGLIKAAVFGFIIAVMGCFHGFNSKGGAQGVGRATTNAVVTASILILAAN 247

Query: 362 SLFAIFYFA 370
            +     FA
Sbjct: 248 YVMTSLLFA 256


>gi|32474659|ref|NP_867653.1| ABC transporter permease [Rhodopirellula baltica SH 1]
 gi|32445198|emb|CAD75200.1| probable permease of ABC transporter [Rhodopirellula baltica SH 1]
          Length = 296

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 119/256 (46%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I+++          +G +   T +     +       +++   Y VGV  +PVV L  
Sbjct: 29  RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A Q  +Q    G E     +++   +RE+G +L A M+AGR G A+ A +G+M
Sbjct: 89  SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+ TMG D +  L+ PR  A ++ +P LTI+A+F  I+G          I  A
Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +           ++F G+ K+ F    I I++   GF     +  +GK  T   V S  
Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268

Query: 356 IVIIIDSLFAIFYFAI 371
           +++ ID    I    +
Sbjct: 269 MILAIDLFLNIVLDWV 284


>gi|83593780|ref|YP_427532.1| hypothetical protein Rru_A2445 [Rhodospirillum rubrum ATCC 11170]
 gi|83576694|gb|ABC23245.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 389

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 82/372 (22%), Positives = 161/372 (43%), Gaps = 4/372 (1%)

Query: 3   ENGITVFRFAGNWKSPEIS-EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           E   +V   +G+W + +     A ++   +       S   D+S +   D+         
Sbjct: 21  EGADSVVVLSGDWLASQTGLRSAVEITRLLGDGAVKGSLRYDVSGLGRWDSALVAF-ARM 79

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
           M    G+   +  +     L        +    N+    +    +  ++   +G   + F
Sbjct: 80  MRAAAGEGANKRFTLDESTLPEAALRLLKLAETNEPLPSASGDKAAASVVARVGHGTLGF 139

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +  + A ++G  +             +     ++  M   G + + +V +++ + GA+
Sbjct: 140 GAELGAIATLVGESVFGVARGLGGRAFTRSV--DILHLMREAGANALVIVAIVNGLIGAI 197

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA QL +FGA IF  DL+ I  +RE+  ++TA+++AGR+G A  A + +M+ NEEI
Sbjct: 198 LAFVGAVQLQRFGAGIFVADLVGIAMVREMAAVMTAIVMAGRTGGAYAAHLATMQGNEEI 257

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA++ +G+     L+ PR+ AL+  +PLL +      ++G  +V     D+    F  + 
Sbjct: 258 DALKVLGIPAYDFLVLPRVVALVTMMPLLYLYGCAIGLLGGFVVSLAILDMSATTFLDQI 317

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                      GL+K+      + +     G   G  +  +G+  T+ VV  I  VI +D
Sbjct: 318 QGAIAGRQFAIGLVKSVAFGFLVALAGCHIGLRAGRSAADVGRAATSAVVVGIVGVIALD 377

Query: 362 SLFAIFYFAIGI 373
           ++FA+    +GI
Sbjct: 378 AVFAVCADRLGI 389


>gi|195952743|ref|YP_002121033.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932355|gb|ACG57055.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
          Length = 246

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 123/243 (50%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                + LG             +K +  +   + ++ Y+G   VPVV+  S  TG V+A 
Sbjct: 1   MVEFINALGEAFYIFLTALLHIFKDRPKIRHFVDRVIYIGADTVPVVVTTSLFTGGVLAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L +F +E     L+++   RE+G +LT++M+  R GSAI A IG+MK+ E+IDA+
Sbjct: 61  QTYSTLHKFNSEYLIGALVALSMGRELGPVLTSLMVVARVGSAITASIGTMKVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+ ++    + SP ++A ++ LPLLTIL++ S IIG  +V    + +   +++ +    
Sbjct: 121 ETLAINPYAYITSPILFACMVDLPLLTILSDISGIIGGYLVSTIIFHVNGHMYWDKTKEI 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I+ GL KA      I  V+   GF     +  +G+  T+ VV S  +++I+D   
Sbjct: 181 VDFYDIYGGLYKAFVYGIVIATVSNYFGFKTSGGNQGVGRATTSSVVISSMLILILDYFL 240

Query: 365 AIF 367
              
Sbjct: 241 TAI 243


>gi|327540665|gb|EGF27237.1| ABC transporter permease protein [Rhodopirellula baltica WH47]
          Length = 296

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 119/256 (46%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I+++          +G +   T +     +       +++   Y VGV  +PVV L  
Sbjct: 29  RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A Q  +Q    G E     +++   +RE+G +L A M+AGR G A+ A +G+M
Sbjct: 89  SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+ TMG D +  L+ PR  A ++ +P LTI+A+F  I+G          I  A
Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +           ++F G+ K+ F    I I++   GF     +  +GK  T   V S  
Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268

Query: 356 IVIIIDSLFAIFYFAI 371
           +++ ID    I    +
Sbjct: 269 MILAIDLFLNIVLDWV 284


>gi|46579657|ref|YP_010465.1| hypothetical protein DVU1246 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449072|gb|AAS95724.1| membrane protein, putative [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233455|gb|ADP86309.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1]
          Length = 267

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 5/257 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +             LG +     +     +     L  ++ Q+Y +G   + V++LI   
Sbjct: 11  VTALGRSFLRLLGELGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIF 70

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+GS++ AEIG M+I
Sbjct: 71  TGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRI 130

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+  M ++ +  L+SPRI A +++ PLLT L +   IIG  +       I   V+
Sbjct: 131 TDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVY 190

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQ 352
           F R  ++  LA++  G +K+   A  +  V+  +G+       G+    +    T+ VV 
Sbjct: 191 FHRIATSVELADVTGGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVM 250

Query: 353 SISIVIIIDSLFAIFYF 369
           S  +V++ D +   F  
Sbjct: 251 SCVLVLVADYVLTSFLL 267


>gi|149907972|ref|ZP_01896640.1| membrane protein, putative [Moritella sp. PE36]
 gi|149808978|gb|EDM68909.1| membrane protein, putative [Moritella sp. PE36]
          Length = 262

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 5/254 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               + +     G             +        +I Q+Y++G   + V+ +    TG 
Sbjct: 9   LGRATLALLQGFGKATLFLIHSVVHMFSRPWQWRRVIEQLYFIGAKSIIVICVTGLFTGM 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG + LS+FG+       +++  +RE+G +LTA+MI GR+GSA+ AEIG M+I+E+
Sbjct: 69  VLGLQGYYTLSKFGSTGLLGSAVALTLIRELGPVLTAIMIIGRAGSAMTAEIGIMRISEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++TM +D +R L+SPRI A +IS PLLT + +   I G  +   +   I  A +F R
Sbjct: 129 IDALKTMTIDPIRFLVSPRIIAALISFPLLTAIFDTVGIFGGYLTGSQLLGINPATYFYR 188

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQSIS 355
             S+  +A++  G IK+ F +  +  V    G+          +  +G   TT VVQ+  
Sbjct: 189 VESSVIMADVAGGFIKSIFFSITVITVCCYHGYYTHIRRDNFGAKGVGLSTTTAVVQASI 248

Query: 356 IVIIIDSLFAIFYF 369
           +V++ID +   F  
Sbjct: 249 LVLVIDYILTTFLL 262


>gi|87311113|ref|ZP_01093237.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
 gi|87286204|gb|EAQ78114.1| probable permease of ABC transporter [Blastopirellula marina DSM
           3645]
          Length = 280

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 115/255 (45%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
                 I  +          +G +           +       +L+   Y VGV  +PVV
Sbjct: 6   EAFFNWIADWGTLGIEFTIAVGDMSLFALRTMQWLFNRLPKRETLVPNFYQVGVMSLPVV 65

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L     G V+A Q  FQ  Q G E     ++++  +RE+G +L A M+AGR GSA+ AE
Sbjct: 66  ALTGTFIGMVLAVQSYFQFRQLGLETRLGAVINMTLVRELGPVLAATMLAGRVGSAMAAE 125

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M++ E+IDA+ +MG + +  L+ PR  A +I +P LT++A+F   +G          
Sbjct: 126 LGTMRVTEQIDALDSMGTNPIHYLVVPRFLACVILIPALTVMADFMGFVGGYFYSVNILG 185

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           I    +           +IF GLIK+ F    I IV+   GF     +  +G+  T   V
Sbjct: 186 IDQHYYMYNSEQFVQSWDIFYGLIKSVFFGGTIAIVSCHRGFHCEAGAEGVGRAATAAFV 245

Query: 352 QSISIVIIIDSLFAI 366
            S   ++ ID    I
Sbjct: 246 YSFVFILAIDLALGI 260


>gi|302341646|ref|YP_003806175.1| hypothetical protein Deba_0204 [Desulfarculus baarsii DSM 2075]
 gi|301638259|gb|ADK83581.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075]
          Length = 244

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/244 (29%), Positives = 122/244 (50%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                  G ++    +      +    +  +++QM +VG   + VV+L    TG V A Q
Sbjct: 1   MGGLSEAGEIVLLLAQAALWLLRPPWRMRLVLKQMEFVGNKSINVVMLTGAFTGGVFALQ 60

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             +  S FGAE      +++   RE+G +LT++M+ GR+GSA+ AEIG+M++ E+IDA+ 
Sbjct: 61  SYYGFSLFGAESLVGSTVALALTRELGPVLTSLMVTGRAGSAMAAEIGTMRVTEQIDALY 120

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            M ++ V+ L+ PR+ A +I LP LTI+ANF  I+G   V      I   VF ++     
Sbjct: 121 VMAVNPVQYLVLPRVLAAVIMLPALTIVANFIGILGGYAVGVGMLGINEGVFVAKIIEYV 180

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              +I  GL+K+      + ++   +GF     +  +G+  T  VV +  +++  D    
Sbjct: 181 EFDDIGMGLVKSAIFGLILSLIGCYKGFYTSGGAEGVGRATTEAVVLASVLILAADYALT 240

Query: 366 IFYF 369
              F
Sbjct: 241 AIMF 244


>gi|42520801|ref|NP_966716.1| hypothetical protein WD0989 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410541|gb|AAS14650.1| membrane protein, putative [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 260

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 114/251 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +    LG       +          +  ++ RQ+  +G   +P+V L   
Sbjct: 8   SVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNIARQIIEIGFFSLPIVGLTGV 67

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GA I  Q +        E     L++I  ++E+G +L ++++ G+ GS++ AEIG+M+
Sbjct: 68  FIGAAIVLQSSLSDPSINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMR 127

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I E+IDA+ T+ ++  + LI+PRI A II  P+LT+ A+   I G  I     ++    +
Sbjct: 128 ITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNI 187

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +           +  TGLIKA      I + +   G+     +  +G   T+ VV S  +
Sbjct: 188 YIKHTAQFFNTYDFITGLIKATAFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSIL 247

Query: 357 VIIIDSLFAIF 367
           +I+ + +  + 
Sbjct: 248 IILANYMITLI 258


>gi|149194581|ref|ZP_01871677.1| abc transporter, permease protein [Caminibacter mediatlanticus
           TB-2]
 gi|149135325|gb|EDM23805.1| abc transporter, permease protein [Caminibacter mediatlanticus
           TB-2]
          Length = 259

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 111/255 (43%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +      + +     G             +     +  L  Q+Y++G   + V+ L S
Sbjct: 4   KLLDNIGTFTLNLIKGFGDFTLFQFNILKLIFTPPYRIKELFNQIYFMGYGSLGVIFLTS 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F TG V A Q      +FG E F    + I  ++E+G +  ++M+  R  SA  AE+GSM
Sbjct: 64  FFTGLVEAVQLYNGFHKFGVEDFMGYTIFISIVKELGPVFASLMVISRGISAYAAELGSM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+  M ++  + LI PRI A IISLPLL +  +  + IGA ++      +   
Sbjct: 124 KVTEQIDALEVMAVNSKQYLIVPRILATIISLPLLILFFDAVSNIGAYLISTYSLGVNGF 183

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +         + +I  G+IK       I  +    G+     +  +G+  T  VV S  
Sbjct: 184 AYLDHIRQFGEIRDIIEGVIKGAVFGYIISAIGTYIGYNTRGGAKGVGQSTTKAVVYSSV 243

Query: 356 IVIIIDSLFAIFYFA 370
            V + D + +  +  
Sbjct: 244 AVFVADYVLSAIFLV 258


>gi|297844946|ref|XP_002890354.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336196|gb|EFH66613.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 350

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 113/232 (48%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + + F+F 
Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340


>gi|225433662|ref|XP_002265320.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 474

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 111/236 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V    G+        K   ++ ++Q+  VG   V V IL +   G     Q   + ++ G
Sbjct: 229 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 288

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G + V  
Sbjct: 289 LNRSVGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGTNPVDY 348

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L++PR+ A  I+LP LT+L     +  ++++    Y I   +            +I + +
Sbjct: 349 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 408

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           IK+      I  V+   G      +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 409 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 464


>gi|58697152|ref|ZP_00372577.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698663|ref|ZP_00373555.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58699132|ref|ZP_00373959.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630652|ref|YP_002727443.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi]
 gi|58534353|gb|EAL58525.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534816|gb|EAL58923.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58536541|gb|EAL59904.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592633|gb|ACN95652.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi]
          Length = 260

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 114/251 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +    LG       +          +  ++ RQ+  +G   +P+V L   
Sbjct: 8   SVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNVARQIIEIGFFSLPIVGLTGV 67

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GA I  Q +        E     L++I  ++E+G +L ++++ G+ GS++ AEIG+M+
Sbjct: 68  FIGAAIVLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMR 127

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I E+IDA+ T+ ++  + LI+PRI A II  P+LT+ A+   I G  I     ++    +
Sbjct: 128 ITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNI 187

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +           +  TGLIKA      I + +   G+     +  +G   T+ VV S  +
Sbjct: 188 YIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSIL 247

Query: 357 VIIIDSLFAIF 367
           +I+ + +  + 
Sbjct: 248 IILANYMITLI 258


>gi|116619717|ref|YP_821873.1| hypothetical protein Acid_0582 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222879|gb|ABJ81588.1| protein of unknown function DUF140 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 265

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 74/239 (30%), Positives = 132/239 (55%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+   + ++   +   +I QM  +GV  +P+V+L  F +GAV+A Q +  L+Q+
Sbjct: 25  EFFVLAGKAFQNIFRRPHYGDDIILQMDTIGVGSLPIVVLTGFFSGAVMALQMSRALAQY 84

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G    +  ++S+   RE+G +LTA+M+AGR+ S I +E+GSMK+ E+IDA+R +G D V+
Sbjct: 85  GQVGKTGTVVSVTLARELGPVLTALMVAGRNASGIASELGSMKVTEQIDAMRALGTDPVQ 144

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PR+ A  + LPLLTI+A+F  + G  I+   + ++P   +++         ++  G
Sbjct: 145 KLVTPRLIATGVMLPLLTIIADFVGMFGGFIIAKFFLNLPPRQYWTSVWRALEWNDVTQG 204

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           L+K    A  I +V    G      +  +G+  T  VV +  +V ++D L    + + G
Sbjct: 205 LLKPLIFAIVISLVGCFYGLRTTGGTQGVGRSTTQAVVLATVLVFVLDLLITKIFVSQG 263


>gi|223940418|ref|ZP_03632271.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223890913|gb|EEF57421.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 259

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 72/249 (28%), Positives = 124/249 (49%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    LG +   T E  +S +  KG   + I Q+Y++GV    VV++    TG V+
Sbjct: 7   RFVAEWLQGLGRISLLTKEALSSLFSLKGSWGNFIYQLYFIGVKSQSVVLITGAFTGMVL 66

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q  +Q  Q   +  ++ ++S+    E+G +LTA+M+AGR G+A+ AEIG+MK+ E++D
Sbjct: 67  CAQTYYQFHQVKLDTATLAVVSVSMCSELGPVLTALMVAGRVGAAMAAEIGTMKVTEQVD 126

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+RT+    V  L+ PR+ A ++SLPLLT  A    II   +V      I     ++   
Sbjct: 127 ALRTLATHPVDYLVVPRLTASVVSLPLLTAEAIAVGIISGYMVGVYLLGIDPVYSYTNML 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                +++ TG+IK+      I I+   +G   G  +  +G+  T  VV +   ++I + 
Sbjct: 187 KYTNSSDVMTGIIKSVIFGVIIAIIGCYKGMTCGEGAEGVGRATTEAVVYASITILISNF 246

Query: 363 LFAIFYFAI 371
              +    +
Sbjct: 247 FLTLCLKEL 255


>gi|296532300|ref|ZP_06895039.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267376|gb|EFH13262.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 261

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 121/254 (47%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +              G +     E  +   +   +    +R    +G   +PVV L + 
Sbjct: 7   ALAAIGRGVLGACRAAGAIALFAVEGVSHLVRPPFYPRLFLRAFVEIGYFSLPVVSLTAI 66

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+A Q     S+FGAE    +++ +   RE+G +L  +M+AGR G+A  AEIG+M+
Sbjct: 67  FTGMVLALQSYSGFSRFGAESAIANVVVLSITRELGPVLAGLMVAGRIGAAFAAEIGTMR 126

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + ++IDA+ T+  + ++ L++PR+ A  +++PLL ++A+   ++G  ++         A 
Sbjct: 127 VTDQIDALTTLSTNPMKYLVAPRLLAGTLAMPLLVVVADILGVMGGWLIGTAQLGFTSAS 186

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           + +   +     ++ +GL+KA      I ++    G+     +  +G   T  VV S  +
Sbjct: 187 YLTSTLNFVQPMDVISGLVKAAVFGFTITLMGCYSGYNSRGGAQGVGAATTRAVVASSIL 246

Query: 357 VIIIDSLFAIFYFA 370
           ++ +D +    +F 
Sbjct: 247 ILALDYILTAMFFG 260


>gi|15606674|ref|NP_214054.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5]
 gi|2983906|gb|AAC07457.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5]
          Length = 340

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 33/366 (9%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V +  G   +  I  +           I  +   +DLS + ++DT GA  +   +++ + 
Sbjct: 8   VLKVEGELTAENIKSL----------KIPKNIEKIDLSDLKKLDTFGATFLALLIKENNI 57

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
            ++         +L  L+    +   +  + + SF                   + +  S
Sbjct: 58  PLERVEGGEKHVELIKLVLDNLKLPKEIPEKKVSFS------------------LKNLFS 99

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LGL + ++ ++            +  +++   G+  V +++ +SF+ G VIA Q A
Sbjct: 100 FPEFLGLFLIHSFKYIKQ-----FEFSAFFKELQTSGLGSVLILVSLSFLIGVVIAYQSA 154

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            QL  FGA IF +DL+ I   RE+  LLT +++AGR  S   A +G  KINEEIDA+R M
Sbjct: 155 VQLRAFGAGIFIVDLVGISTFRELAPLLTGIILAGRVSSGYTANVGLRKINEEIDALRVM 214

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           GL  V +L+ PR+ A +I  PLLT L+  + ++G +I+   +  I    FF +       
Sbjct: 215 GLSPVVLLVLPRVLASLIYTPLLTSLSAVAMLLGGAIIAQVFLGIGVEEFFKKLPEAVAK 274

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++F G +K PF   AI +  +  GF       SLG  V   VV  IS++I++D++F+I 
Sbjct: 275 EDLFAGYVKTPFFGVAIALNGVYYGFLTDPKPESLGYSVMRSVVTGISVIILLDAVFSII 334

Query: 368 YFAIGI 373
           +  +GI
Sbjct: 335 FLRLGI 340


>gi|78357340|ref|YP_388789.1| hypothetical protein Dde_2297 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219745|gb|ABB39094.1| Protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 270

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 5/254 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              ++      LG V+    +     +        +++Q+Y++G   + V+ LI   TG 
Sbjct: 17  LGRNTLRFIGELGAVLLFFLDAVRHIFIASRLFRKVVQQVYFIGSKSLFVIALIGIFTGM 76

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+GSA+ AEIG M+I+++
Sbjct: 77  VLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSAMAAEIGVMRISDQ 136

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  M +  +  L++PR+ A +I  P+LT L N   IIG  +       I   V+F R
Sbjct: 137 IDALEVMDVPPMGYLVTPRLLASLIVFPMLTALFNTIGIIGGYLTGVVLLGINSGVYFYR 196

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355
             S+   +++  G +K    A  + I++  +G+       G+    +    T+ VV S  
Sbjct: 197 IDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFTHMRKDGMGPEGVSNSTTSAVVMSCV 256

Query: 356 IVIIIDSLFAIFYF 369
           +V++ D +   F  
Sbjct: 257 LVLVSDYVLTSFLL 270


>gi|190571416|ref|YP_001975774.1| hypothetical protein WPa_1028 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357688|emb|CAQ55136.1| Putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 260

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 115/251 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +    +G       +     +    +  ++ RQ+  +G   +P+V L   
Sbjct: 8   SVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGV 67

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GAVI  Q +        E     L++I  ++E+G +L ++++ G+ GS+I AEIG+M+
Sbjct: 68  FIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMR 127

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I E+IDA+ T+ ++  + LI PRI A +I  P+LT+ A+   I G  +     ++    +
Sbjct: 128 ITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNI 187

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +         + +   GL+KA      I + +   G+     +  +G   T+ VV S  +
Sbjct: 188 YIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSIL 247

Query: 357 VIIIDSLFAIF 367
           +I+ + L  + 
Sbjct: 248 IILANYLITLI 258


>gi|85703132|ref|ZP_01034236.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217]
 gi|85672060|gb|EAQ26917.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217]
          Length = 261

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 115/253 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +    +G +     +  +   +   +    +  +  +G   +PVV + +  
Sbjct: 8   LASIGRTVLNGLASMGRIALFASDTLSHLARPPFYWREFLHALVQIGWLSLPVVGMTALF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+
Sbjct: 68  TGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMKV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +V     D   A +
Sbjct: 128 TEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVIGIMGGFLVGVGRLDFSAATY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ +GLIK       + ++    G   G  +  +G+   + VV +  ++
Sbjct: 188 LHNTMDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAASVLI 247

Query: 358 IIIDSLFAIFYFA 370
           +  + +    +F+
Sbjct: 248 LASNYILTEVFFS 260


>gi|327399719|ref|YP_004340588.1| hypothetical protein Hipma_1573 [Hippea maritima DSM 10411]
 gi|327182348|gb|AEA34529.1| protein of unknown function DUF140 [Hippea maritima DSM 10411]
          Length = 254

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 8/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            +   IG+  + F  D      +    I    E        K        QMY++GV   
Sbjct: 2   GIIAAIGRFTINFTRDMGGVFLLFISTIKALFE--------KPRFHLTAEQMYFIGVKST 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V L S   G V   Q      +FGAE      +++   RE+  +LTA+MI  R+ SA+
Sbjct: 54  LIVALTSMFVGMVEVLQIYHGFHKFGAESMIGYTVAVSLGRELSPVLTALMIVARNVSAM 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AE+G+M++ ++IDA+  M ++ +  L++PR+ A  + LP L  L+N    IG  +V   
Sbjct: 114 AAELGTMRVTQQIDALEVMAVNPINFLVAPRVIATTVMLPALVSLSNAIGNIGGYLVGIG 173

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +    +         + ++  GLIKA      I ++    G      S  +G   T 
Sbjct: 174 VLGLNPTSYTKNIQVYIDMTDLTYGLIKAAVFGLIISLIGCYMGLTTKGGSRGVGISTTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV +   V++ D     F F
Sbjct: 234 AVVAASISVLVADYFLTAFLF 254


>gi|218961384|ref|YP_001741159.1| hypothetical protein CLOAM1090 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730041|emb|CAO80953.1| conserved hypothetical protein; putative membrane protein
           [Candidatus Cloacamonas acidaminovorans]
          Length = 263

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 65/244 (26%), Positives = 115/244 (47%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G      G+               + Q   +G   + +++L +  TG V A Q 
Sbjct: 18  NLFAGIGEYTIFVGKCLGKIPSLFKRYQEFLIQFKRIGFDSLFLILLTAAFTGLVTALQA 77

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
            +Q   +        L+    + E+  +LTA+++ G+ G++I AEIG+M+++E+IDA+ +
Sbjct: 78  VYQSKGYVPVNLLSVLIGKSTMIELAPVLTALVLTGKVGASIAAEIGTMRVSEQIDALES 137

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           M +D    L  PRI A +++ PL+T+ AN   II A    W  Y I +  FF+   S   
Sbjct: 138 MNIDPYEFLYMPRILAGVLAFPLVTVFANAVGIICAWYFSWLRYGIHYYTFFNNMRSYFI 197

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            ++++ GL K+      I   A   G      +  +GK  T+ VV S   ++++D + A 
Sbjct: 198 PSDLWGGLAKSFVFGFIITSFACYHGDRCFGGAEGVGKATTSTVVYSSVAILVMDFIVAW 257

Query: 367 FYFA 370
           F F 
Sbjct: 258 FLFG 261


>gi|254513828|ref|ZP_05125889.1| ABC transporter permease protein [gamma proteobacterium NOR5-3]
 gi|219676071|gb|EED32436.1| ABC transporter permease protein [gamma proteobacterium NOR5-3]
          Length = 369

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 168/376 (44%), Gaps = 18/376 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +S +   +   AG+W +  +  +       +          VD++++T  D      +++
Sbjct: 9   LSADDQLLI--AGDWSAAVLPTLDSLFTTLLE---TEGPLKVDVTSVTVWDPRLEAKLLH 63

Query: 61  FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                     +++L G      QLF L +               F   + ++    IG  
Sbjct: 64  LQRLAYAGQRQLELLGTPDSQTQLFKLATAVAPYAGTAATSSGLFTLKNLRSTLADIG-- 121

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                +D       LG   S            +      I  +   G   + ++ L S +
Sbjct: 122 -----DDLLESLEFLGATTSAVLRTLLGRSGMRR--REFIESLAQAGPQAMGIITLTSVL 174

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++A  GA QL QFGA +F  DL++I  LRE+G L+TA+++AGR+G+A  A++ +M+ 
Sbjct: 175 VGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAIVMAGRTGAAYAAQLSTMQT 234

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDAI T+G++ +  L+ PR+ AL++ +PLL + A+    I    V+     +    +
Sbjct: 235 NEEIDAITTLGINPLEFLVVPRMLALLLMMPLLVVYADAL-GIVGGAVVAGGMGVTPLQY 293

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            S+  S  T+ +   G++K    A  I I   + G   G +S ++G+  T  VV ++  +
Sbjct: 294 ISQLDSAITITHFLVGVVKGLIFALLIAIAGCRAGMNAGRNSEAVGRATTEAVVTAVVYL 353

Query: 358 IIIDSLFAIFYFAIGI 373
           I+ D+   I    +GI
Sbjct: 354 IVADAAINILCQLLGI 369


>gi|295691537|ref|YP_003595230.1| hypothetical protein Cseg_4204 [Caulobacter segnis ATCC 21756]
 gi|295433440|gb|ADG12612.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 269

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 122/254 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +   ++G V        A++     F   L+RQ   +G   +PVV L +  
Sbjct: 15  IQALGRSTLAAVRMVGAVGVFAARGTAAALSPPWFPGQLLRQFMAIGFFSLPVVGLTAVF 74

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 75  TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+RT+  D  R L+ PR+ A ++ LPLLT +A+   + G  +V  +  D    V+
Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPLLTAVADTIGVAGGWLVATRVLDFSPTVY 194

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I +GLIKA      + ++    G+     +  +G+  T  VV S  ++
Sbjct: 195 IRNTIDFLESWDIVSGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254

Query: 358 IIIDSLFAIFYFAI 371
              D L   F+  +
Sbjct: 255 FASDYLLTTFFTHM 268


>gi|15605864|ref|NP_213241.1| hypothetical protein aq_355 [Aquifex aeolicus VF5]
 gi|2983037|gb|AAC06647.1| hypothetical protein aq_355 [Aquifex aeolicus VF5]
          Length = 245

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 118/243 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G     T       +K    L   I Q+ YV     PVV++ S  TG VIA 
Sbjct: 1   MTKFLEEVGRATLLTLWSIFFLFKKPPRLKHFISQLTYVAAETTPVVLVTSLFTGGVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      +F AE     +++I   RE+G +LT++M+  R GSA+ A IG+M+I ++IDA+
Sbjct: 61  QTYSTFHRFNAEYLIGAVVAISMGRELGPVLTSLMVVARVGSAMTASIGTMRITQQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M ++ +  L++PRI+A    +PLLT+L++ + I G   V  K + +   +++ +    
Sbjct: 121 EVMAINPISFLVTPRIFATTFGVPLLTVLSDVAGIFGGWFVATKLFGVNEYLYWQKMVDL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I  GL KA F    IG V+   GF     +  +GK  T  VV S  +++I D   
Sbjct: 181 TEFHDIVGGLYKATFFGFIIGAVSCYYGFYTKGGTAGVGKATTNSVVTSSMLILISDYFL 240

Query: 365 AIF 367
              
Sbjct: 241 TAV 243


>gi|212703465|ref|ZP_03311593.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098]
 gi|212673125|gb|EEB33608.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098]
          Length = 264

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 5/255 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +           LG V     +     +     +   I+Q+Y +G   + V++LI    G
Sbjct: 10  RLGAAVLRMLDSLGAVTLFMLDGLRHIFTSPRIVPRTIQQLYVIGYKSLFVILLIGIFCG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L QFG+       +S+  +RE+G +LTA+M+AGR+GS++ AEIG M+I++
Sbjct: 70  MVLGLQGYYTLVQFGSVGMLGSAVSLSLIRELGPVLTAIMLAGRAGSSMAAEIGVMRISD 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  M ++ +  L+SPR+ A +++ PLLT + +   IIG  +       I    +  
Sbjct: 130 QIDALDVMDINSMAYLVSPRLVASLLAFPLLTAIFDVIGIIGGYLTGVLMLHINEGAYLY 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSI 354
           R  S+ T+ ++  G IK+      +  V   +G+   +        ++G   T+ VV S 
Sbjct: 190 RIASSVTMNDVAGGFIKSLVFGLLVATVCCHQGYTTHMRRDSVGPEAVGNATTSAVVISC 249

Query: 355 SIVIIIDSLFAIFYF 369
            ++++ D +   F  
Sbjct: 250 VLILVADYVLTSFLL 264


>gi|289547869|ref|YP_003472857.1| hypothetical protein Thal_0093 [Thermocrinis albus DSM 14484]
 gi|289181486|gb|ADC88730.1| protein of unknown function DUF140 [Thermocrinis albus DSM 14484]
          Length = 245

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 122/243 (50%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G     T       ++    L   ++Q+ Y+G   VPVV++ S  +G VIA 
Sbjct: 1   MLRVFEEVGKAALLTFLGIYFLFRNPPRLYHFVKQLAYLGAETVPVVVITSLFSGGVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      +F AE     ++++   RE+G +LTA+M+  R GSA+ A IG+M+I E+IDA+
Sbjct: 61  QTYSTFHRFNAEFLIGAVVALSMFRELGPVLTALMVTARVGSAMTASIGTMRITEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ V  L++PRI A ++ LPLLTI+++ + I+G   V    + +   +F+ R    
Sbjct: 121 EVMGMNPVSYLVTPRIVAGVLGLPLLTIISDVAGILGGWFVAVGLFGVNNHLFWERMRDL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   GL KA F    +  V+   GF     +  +G+  T+ VV S  +V+I D   
Sbjct: 181 VEFYDFVGGLYKAVFFGLVVSAVSCYFGFYTKGGTEGVGRATTSSVVTSSMLVLISDYFL 240

Query: 365 AIF 367
              
Sbjct: 241 TAI 243


>gi|297621446|ref|YP_003709583.1| putative permease component of ABC transporter [Waddlia
           chondrophila WSU 86-1044]
 gi|297376747|gb|ADI38577.1| putative permease component of ABC transporter [Waddlia
           chondrophila WSU 86-1044]
          Length = 274

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 124/249 (49%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +N   +    LG            ++K       +  QMY +GV  +PVV +  F TG V
Sbjct: 13  LNILVNTLAALGDYFRLIALVIWEAFKNPPQAKLIRNQMYEIGVLSLPVVAITGFSTGMV 72

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q  FQL+  G    +  +++   + E+G +LTA M+ GR G+++ AE+G+MK+ E+I
Sbjct: 73  LAAQSFFQLADKGLASATGLMVAKAMMVELGPVLTAFMVTGRVGASMCAELGTMKVTEQI 132

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+++M ++ +  LI+PR  A  + LPLLT+ +    I G  ++   +Y +P   F    
Sbjct: 133 DALKSMTVNPLGYLIAPRFIAGTLMLPLLTVFSTVMGIGGGYMIAVWFYKMPSNTFLDPL 192

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               T  + F+GL+KA      I  ++  +G      +  +G+  T  VV   S+++I +
Sbjct: 193 PINITNFDFFSGLVKAISFGIVIVTISCYKGMTTRGGAAGVGRATTNSVVICYSVILIGN 252

Query: 362 SLFAIFYFA 370
            L  +    
Sbjct: 253 FLLTVALNE 261


>gi|121534945|ref|ZP_01666764.1| protein of unknown function DUF140 [Thermosinus carboxydivorans
           Nor1]
 gi|121306544|gb|EAX47467.1| protein of unknown function DUF140 [Thermosinus carboxydivorans
           Nor1]
          Length = 256

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 2/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + K       Q    G VI    E      +F   L   +RQ  ++GV  +P+V+L    
Sbjct: 6   LEKLGRTVLVQLETTGRVILLFTETIYHLRRF--NLKLTLRQAAHLGVDSLPIVLLTILF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  Q A +  ++GA+     ++++   RE+  +LT V+ AGR G+AI AEIGSMK+
Sbjct: 64  TGMVMTVQTAHEFIKYGAQSSVGGVVAVAMGRELAPVLTGVVAAGRVGAAITAEIGSMKV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R M  + +  L+ PR+ A +  LP+L + A+     G  +V   Y  I    +
Sbjct: 124 TEQIDALRVMATNPIAYLVVPRLVACVFMLPILVVFADVIGTFGGYLVATLYAGIGSFTY 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    + ++  GLIKA      I I+   +G      +  +G+  T  VV SI ++
Sbjct: 184 LHSIKVFTAINDVTGGLIKAMVFGAIIAIIGCYKGLTTDEGAEGVGRATTGSVVASIILI 243

Query: 358 IIIDSLFAIFYF 369
            + +   ++  +
Sbjct: 244 FVTNYFLSLLLY 255


>gi|296117337|ref|ZP_06835927.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295976103|gb|EFG82891.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 433

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 147/372 (39%), Gaps = 8/372 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E   T+   +G W   +     D     +  + +          +   DT     +   
Sbjct: 70  AEANRTLITLSGEW-IAQTGTTPDFPNNGLAPATKGKPLEFSTDGLGRWDTSLISFLWEL 128

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                         T  +    L+            P    F          +G+  +  
Sbjct: 129 KRDARQADLSVSAETLPDSARKLLDLLPEIPPDAHAPPPHHFAP-----VTAVGQFTLDT 183

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +N+    + +                  +     L+  +   G + + +V +++F+ GA+
Sbjct: 184 LNEIGCVSEMGVATAKGGLAALLGKGMMRTI--DLMSDVRAAGPTALVIVGVVNFLVGAI 241

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A  GA QL +F A+I+   L+ I  +RE+  ++TA+++AGR+G A  A I +M+ NEEI
Sbjct: 242 LAFVGAVQLHKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARISTMQGNEEI 301

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+   G+     LI P + ALI+++PLL +      + G   V +   ++    +F   
Sbjct: 302 DALTVFGIPVASYLILPSVLALILTMPLLYLYGCLIGMFGGFFVSYIMLNVTPLGYFHET 361

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L+    G IK+      IG+ + + G   G  +  +G   T  VV  I  VI ID
Sbjct: 362 LYAVALSQFVFGFIKSIVFGGFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVIAID 421

Query: 362 SLFAIFYFAIGI 373
           ++FA+    + I
Sbjct: 422 AIFAVIANVLDI 433


>gi|94498322|ref|ZP_01304881.1| ABC transporter, permease protein, putative [Sphingomonas sp.
           SKA58]
 gi|94422202|gb|EAT07244.1| ABC transporter, permease protein, putative [Sphingomonas sp.
           SKA58]
          Length = 303

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 4/298 (1%)

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135
              E L  LI          Q+                 G++++    D+       G +
Sbjct: 10  GEREDLQRLIDLVRPAL--EQESSGKAGVTGVLGFFERFGRQVIGTAGDAYQMLVFTGQL 67

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           I   G    +  + +     L+  M   G++G+P+V +++F  GAVIA  G   L+  G 
Sbjct: 68  IIALGRTLGNPRRLRM--TPLVAFMQDAGINGLPIVFIMTFFIGAVIALVGTNLLTTLGV 125

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
           E+F+I L+ +  LRE GV++TA++++GRS S+  A+IGSM++N+E DA++ MG+D    L
Sbjct: 126 EVFTIQLVGVAILREFGVVITAILLSGRSASSFAAQIGSMRMNQETDAMQVMGVDRFDAL 185

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI A ++ +PL+T  A+   + G  +V W   DI    F  R   T  + + + G+ 
Sbjct: 186 VIPRILAALLMMPLMTFCADIGGLAGGLLVSWVTIDISPVFFIQRTLETVDIKHFWIGMC 245

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           KAPF+A  I     + G  VG    SLG+ VT+ VVQSI +VI+ D++FA+ + A+ +
Sbjct: 246 KAPFLALIIAAAGCRHGLMVGGDVQSLGQNVTSAVVQSIFMVIMFDAIFAVIFMALDL 303


>gi|292670497|ref|ZP_06603923.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
 gi|292647907|gb|EFF65879.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Selenomonas noxia ATCC 43541]
          Length = 310

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    +G V    GE      + +  + S+I QM ++G   + +V L  
Sbjct: 58  RILEAVGAFVLTHLANIGRVTLLYGETIRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTL 116

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +M
Sbjct: 117 LFTGVVLTLQIAHEFIRYGAQSTVGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTM 176

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+R M +  V  LI PR+ A ++ +P+LT+  +   ++G  +    Y  I   
Sbjct: 177 KVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYLTAVYYSGISAY 236

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F +     A + ++  GLIKA F    I ++    G      +  +GK     VV SI 
Sbjct: 237 TFTNSITQFALIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPSGAEGVGKATMHTVVTSII 296

Query: 356 IVIIIDSLFAIFYF 369
           ++ I++++   F F
Sbjct: 297 VIFILNAVLTFFLF 310


>gi|242277698|ref|YP_002989827.1| hypothetical protein Desal_0221 [Desulfovibrio salexigens DSM 2638]
 gi|242120592|gb|ACS78288.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 270

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 5/254 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               S +  +  G +           +   G     ++++Y++GV  + V+ LI   TG 
Sbjct: 17  VGKLSINLLNEAGAMFIFLMHGLLHIFSSLGIFKKSVKELYFIGVKSITVISLIGLFTGM 76

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  Q  + LS+FG+E F    +++  +RE+G +LTA+M+ GR+GS++ AEIG M+I+E+
Sbjct: 77  VVGLQTQYALSKFGSEGFLGAAVALSLVRELGPVLTAIMLTGRAGSSMTAEIGVMRISEQ 136

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  M ++ +  L+SP++ A +IS P+LT   +   I+G  +           V++ R
Sbjct: 137 IDALELMDINPINYLVSPKLVASLISFPILTAFFDLIGIVGGYLSGVMLMGGNAGVYWHR 196

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355
            H+     +I  G  K+   A  +  V   +G+       G     + +  TT VV S  
Sbjct: 197 VHTALGWDDISAGFNKSLVFAVLVCTVCCFQGYFTHHRKDGKGPEGVSQATTTAVVMSCV 256

Query: 356 IVIIIDSLFAIFYF 369
           +V++ D +      
Sbjct: 257 LVLVADYIITSLLL 270


>gi|213018814|ref|ZP_03334622.1| putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995765|gb|EEB56405.1| putative membrane protein [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 244

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 114/242 (47%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       +     +    +  ++ RQ+  +G   +P+V L     GAVI  Q
Sbjct: 1   MNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAVIVLQ 60

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            +        E     L++I  ++E+G +L ++++ G+ GS+I AEIG+M+I E+IDA+ 
Sbjct: 61  SSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDALT 120

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+ ++  + LI PRI A +I  P+LT+ A+   I G  +     ++    ++        
Sbjct: 121 TLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNIYIKYTAQFF 180

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + +   GL+KA      I + +   G+     +  +G   T+ VV S  ++I+ + L  
Sbjct: 181 NMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSILIILANYLIT 240

Query: 366 IF 367
           + 
Sbjct: 241 LI 242


>gi|302340503|ref|YP_003805709.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
 gi|301637688|gb|ADK83115.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
          Length = 253

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 118/249 (47%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G       +    +++       ++ Q  ++GV  V ++ L S   G + 
Sbjct: 3   RRLVRTFEQFGSFCLFALDSFRWTFRRPWRPGLVLEQAEHIGVDSVLIIALSSLSIGMIF 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q    ++ F AE      +++   RE+  + T++M+  ++GSA+ AEIG+M+++E+ID
Sbjct: 63  SLQVTDLMAMFRAETMVGSAVAMTMGRELAPVFTSLMLVAKNGSAMAAEIGTMRVSEQID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ TM ++ ++ L+ PRI   II  P+LT L+N   ++G+ +V      +  A +  + +
Sbjct: 123 AMETMSVNPIQYLVVPRIIGSIIVFPILTALSNVVGVLGSYVVSIHMKGVDPAGYLDQLY 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +I++G IKA  M   + ++    GF     S  +G   T  VV +   V++ D 
Sbjct: 183 RFVDPVDIWSGFIKAAIMGALVSLICCFFGFTTSGGSKEVGTASTKAVVTASVAVLVSDY 242

Query: 363 LFAIFYFAI 371
           + +     I
Sbjct: 243 IMSDIMLKI 251


>gi|163783076|ref|ZP_02178071.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881756|gb|EDP75265.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 248

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 67/243 (27%), Positives = 117/243 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G       +     +K    +   I Q  Y+      VV++ S  TG VIA 
Sbjct: 4   LLKLTEEVGKASLLALQAVYFLFKKPPKVRHFIDQFTYIAAETSLVVLVTSTFTGGVIAL 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      +F AE     ++++   RE+G +LT++M+  R GSA+ A IG+M+I ++IDA+
Sbjct: 64  QTYSTFHRFNAEYLIGAVVALSMGRELGPVLTSLMVVARVGSAMTANIGTMRITQQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M ++ VR L++PRI+A  + +PLLTI++N + + G  +V  K + +   +++ +    
Sbjct: 124 EVMAVNPVRYLVTPRIFATTVGVPLLTIVSNVAGMFGGWLVATKLFKVNEYLYWQKMIDL 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I  GL KA      I  V+   GF     +  +G+  T  VV +  +++I D   
Sbjct: 184 TEFYDIVGGLYKAFVFGFIIAAVSCYFGFYTRGGTEGVGRSTTNSVVTASMLILITDYFL 243

Query: 365 AIF 367
              
Sbjct: 244 TAI 246


>gi|320103291|ref|YP_004178882.1| hypothetical protein Isop_1750 [Isosphaera pallida ATCC 43644]
 gi|319750573|gb|ADV62333.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644]
          Length = 280

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 116/245 (47%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +      +     G  +  +                L+   + +GV  +PVV +    
Sbjct: 15  LTRVGERIITMVSEFGSWVQFSAATLGWMVARPPRRSHLVPNFFTIGVRSLPVVAVTGLF 74

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ Q      + G E     +++I  ++E+G +L A M+AGR GSA+ AE+G+M++
Sbjct: 75  IGMVLSVQSFNSFKEMGLETRLGSVVNISLVKELGPVLAATMLAGRVGSAMAAELGTMRV 134

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+  +G++ +  L+ PR  A ++ +P LT++A+F+  +G S V  K   +    +
Sbjct: 135 TEQIDALHALGVNPIAYLVVPRFLACVVLIPALTLVADFAGALGGSFVSVKMLGVDGYYY 194

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +    S     ++  GL K+ F   AI +++   GF     +  +G+  T   V S   +
Sbjct: 195 WKHSQSFVEPLDVVAGLFKSVFFGAAIALISCHRGFHSKGGAEGVGQAATEAFVSSFIAI 254

Query: 358 IIIDS 362
           + +D 
Sbjct: 255 LFLDF 259


>gi|320107063|ref|YP_004182653.1| hypothetical protein AciPR4_1853 [Terriglobus saanensis SP1PR4]
 gi|319925584|gb|ADV82659.1| protein of unknown function DUF140 [Terriglobus saanensis SP1PR4]
          Length = 259

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 76/250 (30%), Positives = 125/250 (50%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           ++ +      L      +G    S      +   +  QM  +G   +P+VIL  F TG V
Sbjct: 7   VDFTKRSIAALQEYSLLSGRAMKSLLTPPIYWDEIFTQMDSIGFGSLPIVILAGFFTGCV 66

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q A  L QFGA   +  L+++  ++E+G +LT +M++GR+ S I +E+GSM++ E+I
Sbjct: 67  LALQSATALQQFGAVSKTGSLVALSMVKELGPVLTGLMVSGRNASGIASELGSMRVTEQI 126

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R +G D VR L+ PRI A +I L  L+IL+    I G ++V      +  + +F   
Sbjct: 127 DAMRALGTDPVRKLVLPRIAATVIMLAFLSILSAAMGIAGGALVSVALLGLNSSAYFHSS 186

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +++    ++  GL+K  F    I  V    G      +  +GK  T  VV S   +I++D
Sbjct: 187 YASLVYGDVVQGLVKPVFFGFIIASVGCYFGMTTKGGTQGVGKSTTQAVVISSVCIIVVD 246

Query: 362 SLFAIFYFAI 371
            L       I
Sbjct: 247 FLLTRLMIGI 256


>gi|239906932|ref|YP_002953673.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239796798|dbj|BAH75787.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 269

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 131/255 (51%), Gaps = 5/255 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +      LG +   T +              +++Q+Y++GV  + V+ LI   TG
Sbjct: 15  ALGRVTLRFVAELGGLFLFTLQGLWRILVPAPSWSKIVQQVYFIGVKSIFVIALIGLFTG 74

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L +FG+E      +++  +RE+G +LTA+MI GR+GS++ AE+G M+I+E
Sbjct: 75  MVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMITGRAGSSMAAELGIMRISE 134

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ TM ++ +R L++PR+ A +I  PLLT + +   I+G  +       I   V+F 
Sbjct: 135 QIDALSTMDINPMRFLVAPRLAASLICFPLLTAIFDVVGILGGYLSGCVLLGINPGVYFD 194

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSI 354
           R  +T  LA++  G +K+   A  + ++   EG+          +  +    T+ VV S 
Sbjct: 195 RIDATVELADVTGGFVKSVVFALLVAVICCYEGYFTHARQGGFGAKGVSLATTSAVVLSC 254

Query: 355 SIVIIIDSLFAIFYF 369
            ++++ D +   F  
Sbjct: 255 VVILVADYVLTSFLL 269


>gi|255549070|ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricinus communis]
 gi|223545535|gb|EEF47040.1| Inner membrane protein yrbE, putative [Ricinus communis]
          Length = 350

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V+   G+      K K    + ++Q+  VG   V V +L S   G     Q   + ++ G
Sbjct: 105 VLVVAGQVIIRILKGKVHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTKLG 164

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
            +     ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G + V  
Sbjct: 165 LQRSVGGVLALAFSRELSPVVTSIVVAGRIGSAYAAELGTMQVSEQTDTLRVLGTNPVDY 224

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L++PR+ A  ++LPLLT++     +  ++I+    + +   +            +I + +
Sbjct: 225 LVTPRVIASCVALPLLTLMCFTVGLASSAILADGVFGVSINIILDSAQRVLKSWDIISAM 284

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI-FYFAIG 372
           IK+      I IV+   G      +  +G+  T+ VV S+  + I D   +  F+  +G
Sbjct: 285 IKSQVFGAIISIVSCAWGVTTSGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQGVG 343


>gi|86159557|ref|YP_466342.1| hypothetical protein Adeh_3136 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776068|gb|ABC82905.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 386

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 86/369 (23%), Positives = 157/369 (42%), Gaps = 9/369 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V   AG W+  +    A DV   ++++    +A+   + +   D+  A  +    +
Sbjct: 26  DGALVIALAGIWRLADGLPPAADVARELDRTPAPRAAVD-AAGVAAWDSALAVFVHGVAQ 84

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123
               +     +      L  L+               +       +    +G + ++   
Sbjct: 85  TCRTRGVPLDLRALPAGLARLLDLVREPAA------PASRAAPASHGIARLGVRALRREE 138

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              +    +G          A   + +   L L+ Q  + G   +P+V L+SF+ G ++A
Sbjct: 139 RLRAAVAFVGETAIAFARLAARRARLRPQDLWLLVQ--HSGAEALPIVALVSFLVGIILA 196

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
             G  QL  FGAE F  D++ I  +R++  L+T V +AGRSG A  A++ +M + +EIDA
Sbjct: 197 FVGITQLRFFGAEAFVADIVGIAIVRDMAALITGVTLAGRSGGAFAAQLATMNVTQEIDA 256

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +RT+G+  V  L+ PR+ AL   +PLLT+ A+ S I+G ++V       P A +  +   
Sbjct: 257 LRTLGISPVEYLVVPRVLALTAMMPLLTLFADASGILGGAMVGTTMLHQPLAGYLHQTAL 316

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                ++  GL+K       I +     G      +  +G+  T  VV  I  +I    +
Sbjct: 317 ALVPGDLAGGLVKGATYGLLIALTGAFRGMQAERSAERVGEAATQAVVTGIVAIISACGV 376

Query: 364 FAIFYFAIG 372
           +   +F  G
Sbjct: 377 YQYVFFLFG 385


>gi|116747921|ref|YP_844608.1| hypothetical protein Sfum_0473 [Syntrophobacter fumaroxidans MPOB]
 gi|116696985|gb|ABK16173.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 258

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 5/257 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +  Q   LG +    G   A   +  G  LS+++Q+ ++G     V+   +  
Sbjct: 2   IRSLGAYTVVQVGFLGRLGLFLGRMLAGITRPPGKFLSVVKQIQFIGTKSFLVIGFTAIF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A QG + L+  G+E +    +S+  +RE+G +LTA+M+ GR+GSA+ AEIG M+I
Sbjct: 62  TGMVLALQGYYALASVGSEGWLGKAVSLSLIRELGPVLTALMVTGRAGSAMCAEIGIMRI 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E+IDAI  M +D    LI+PR+ A +I+LPLLT   +   I+G  +V      +    +
Sbjct: 122 DEQIDAIECMAIDPHSYLITPRLLAALIALPLLTAFCDVVGIVGGYLVGVNLLGVNAGAY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352
                S+    +++ G++K+      I  +   +G+  G          + +  T  VV 
Sbjct: 182 LDSMESSVVWKDVYMGIVKSICFGVLIIWICTYKGYYAGVDENNFGPEQVSRATTNAVVL 241

Query: 353 SISIVIIIDSLFAIFYF 369
           S   +++ D +      
Sbjct: 242 SSISILVCDYVVTSVLL 258


>gi|120602860|ref|YP_967260.1| hypothetical protein Dvul_1816 [Desulfovibrio vulgaris DP4]
 gi|120563089|gb|ABM28833.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4]
          Length = 267

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 5/243 (2%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG +     +     +     L  ++ Q+Y +G   + V++LI   TG V+  QG + L 
Sbjct: 25  LGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLV 84

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FG+E      +++  +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+  M ++ 
Sbjct: 85  KFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINP 144

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+SPRI A +++ PLLT L +   IIG  +       I   V+F R  ++  LA++ 
Sbjct: 145 MGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVT 204

Query: 312 TGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            G +K+   A  +  V+  +G+       G+    +    T+ VV S  +V++ D +   
Sbjct: 205 GGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTS 264

Query: 367 FYF 369
           F  
Sbjct: 265 FLL 267


>gi|34558257|ref|NP_908072.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34483976|emb|CAE10972.1| ABC TRANSPORTER, PERMEASE PROTEIN [Wolinella succinogenes]
          Length = 268

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 4/270 (1%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
                      +G+ ++             G  +        + +        L  QM  
Sbjct: 2   RSKMVTAFFGALGRPVLLLWKS----LEKFGEFLMFHLRLIPAYFTPPFRARELFIQMES 57

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +GV    V++L S  TG V+A Q      QFGAE F    + +   RE+G +  A+M+  
Sbjct: 58  IGVGSFWVIVLTSVFTGMVLAIQFYQGFHQFGAENFMSYPIFLAITRELGPVFAALMLTS 117

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R+ SA+ AE+G+M++ E+IDAI T+ +D  R LI PRI A  +SLPLL IL NF   + A
Sbjct: 118 RAISAMAAELGTMRVTEQIDAIDTLAIDSKRYLIVPRILASTLSLPLLVILFNFIGNLSA 177

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
             +      +    + S       L+++   L+KA      + +V    G+     +  +
Sbjct: 178 YFISIHVLGVNEESYRSIVRQYLELSDLVISLVKAFVFGYLVSLVGTYIGYNTRGGARGV 237

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G+  T+ VV S   +   + L + F+ A+ 
Sbjct: 238 GRSTTSAVVFSAVTIFGANYLLSAFFLAMD 267


>gi|114328883|ref|YP_746040.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114317057|gb|ABI63117.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 259

 Score =  195 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 120/250 (48%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                 S     G +        +   +   +    +R +  +G   +PVV L +  TG 
Sbjct: 9   LGRGFFSACASTGRMGVFGLTALSHLLRPPFYGRMFLRALVEIGYFSLPVVALTAIFTGM 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q     ++F AE     L+S+   RE+G +L  +M+AGR G+A+ AE+G+M++ ++
Sbjct: 69  VLALQSYTGFARFSAESAIASLVSLSVTRELGPVLAGLMVAGRVGAAMAAELGTMRVTDQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T+    ++ L++PR+ A  I+LPLL I+A+   ++G  +V           + + 
Sbjct: 129 IDALTTLSTHPMKYLVAPRLLAGTIALPLLVIIADILGVMGGWLVASIKLGFNSHTYLAN 188

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             ++  + ++ +GL KA      I +     G+     +  +G   T+ VV +  +++  
Sbjct: 189 TIASIHMDDVMSGLTKAAVFGFLIALQGCYHGYNSRGGAQGVGSATTSAVVTASVLILAF 248

Query: 361 DSLFAIFYFA 370
           D +    +F+
Sbjct: 249 DYVLTELFFS 258


>gi|322435258|ref|YP_004217470.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9]
 gi|321162985|gb|ADW68690.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9]
          Length = 259

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 124/243 (51%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +       G   A+ +    +   +  QM  +GV  +P+V+L  F TG V+A Q A 
Sbjct: 14  VTAIQDYSLLAGRGVANLFSPPVYWDDIFTQMDSIGVGSLPIVVLTGFFTGCVLALQSAT 73

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L QFG+   +  L+++  ++E+G +LT +M++GR+ S + +E+GSM + E+IDA+R +G
Sbjct: 74  ALKQFGSISLTGSLVALSMVKELGPVLTGLMVSGRNASGMASELGSMMVTEQIDAMRALG 133

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D +R L++PRI A ++ L  LTIL++   I G ++V      +  + +    + +    
Sbjct: 134 TDPIRKLVTPRIIATVVMLFFLTILSDAVGIAGGALVSVTILGLNLSSYLHTSYQSLLYG 193

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL K  F A  I  V    G      +  +GK  T  VV S   +I++D L +   
Sbjct: 194 DVVQGLTKPLFSAFIIATVGCFFGLKTKGGTQGVGKATTQAVVYSSVFIIVVDFLVSRLM 253

Query: 369 FAI 371
             +
Sbjct: 254 IGL 256


>gi|186472351|ref|YP_001859693.1| hypothetical protein Bphy_3498 [Burkholderia phymatum STM815]
 gi|184194683|gb|ACC72647.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 382

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 80/367 (21%), Positives = 157/367 (42%), Gaps = 4/367 (1%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            V    G+W +      +   V  I K++ + +  ++ S +   D+     +M   E   
Sbjct: 20  AVLHLRGDWITCATGVRSAAEVHEIVKAVGACALRLETSNLGRWDSALIVFLMMLRESVR 79

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
                       +      +            + +      ++L   +G+   +   ++ 
Sbjct: 80  KGGTRPFEIDESD--LPHAAQRLLALAAAGSGEVAGIAAVHRSLATQVGEAYFQAWANAV 137

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S   ++G    +     A   + +G    +++ M   G   + +V +++ + GA++A  G
Sbjct: 138 SIVALVGETALHCTAAFAHRVRTRGV--DVLQLMREAGAGALAIVAIVNGLVGAILAFIG 195

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           A Q  +FGA I+  +L+ I  +RE+  L TA+++AGR+G A  A + +M+ NEEIDA+  
Sbjct: 196 AVQFQRFGAGIYVANLVGIAVVREMAALATAIVMAGRTGGAYAAHLATMQGNEEIDALNA 255

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+     L+ PR+ AL+  +PLL + +    ++   IV     DI    +  +      
Sbjct: 256 VGIPVFDFLVLPRVIALVSMMPLLYVYSCAVGLLSGFIVTLATLDITAVTYLQQLRGAVD 315

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                 GL K+      + +     G   G  +  +G+  T+ VV  I  VI +D++FA+
Sbjct: 316 GVQFAIGLAKSIAFGSFVALAGCHIGLKAGRSAAEVGRAATSAVVVGIVGVISLDAIFAV 375

Query: 367 FYFAIGI 373
              A+GI
Sbjct: 376 CTNALGI 382


>gi|149178242|ref|ZP_01856835.1| probable permease of ABC transporter [Planctomyces maris DSM 8797]
 gi|148842891|gb|EDL57261.1| probable permease of ABC transporter [Planctomyces maris DSM 8797]
          Length = 280

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 120/249 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I        +   +LG +     E             +L   MY++G+  +PV+++    
Sbjct: 14  IHGLGRGVINTVCLLGDLFLFGWEMLGWIITRLPPRSNLWSCMYHIGIQSIPVILITGGF 73

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A Q   Q      E     +++I  + E+G +L A+M+AGR G+++ AE+G+M++
Sbjct: 74  IGMVLAVQSYDQFKLMHLENQIGAVIAISLVEELGPVLAAIMLAGRVGTSMSAELGTMRV 133

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R +G D +  L+ PR  A  + +PLLTI+A+   I+G      +   +    +
Sbjct: 134 TEQIDALRALGADPIHYLVVPRFLACCLLIPLLTIVADAVGILGGWFFSTQILGVDSFYY 193

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +          ++  G+ K+ F   AI +++   GF  G  +  +GK  T   V S  ++
Sbjct: 194 WHYSEQFVYAYDVMGGIFKSFFFGAAISLISCHRGFHCGAGAEGVGKAATEAFVYSFIVI 253

Query: 358 IIIDSLFAI 366
           +I+D L  +
Sbjct: 254 MILDFLLGV 262


>gi|222054639|ref|YP_002537001.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221563928|gb|ACM19900.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 258

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG+K++KF         +LG  +    E           L S+  QM  +G  
Sbjct: 1   MAGAIDRIGRKVIKFHEIIGEMLILLGQTVYFFREA-------PRNLASIFAQMAIIGYE 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L+++G++     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELNKYGSQDIIGAIVGHSMVRELGPVMTSFLVAGRVGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G MK+ EEIDA++T+ ++ VR L  PR  A I+ +P L I ++   I+G +I+ 
Sbjct: 114 AMAAELGVMKVYEEIDALKTLDINPVRYLAMPRFIACIVCVPALVIYSDCIGIVGGAIIS 173

Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             +    + ++ ++    +      I  GLIKA      + +V+   GF     +  +G 
Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFQEIGNGLIKAFVFGAIVALVSCYVGFKTSGGARGIGI 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S  ++++ D        
Sbjct: 234 STTRSVVWSFMLILVADYFLTRLLM 258


>gi|225848307|ref|YP_002728470.1| toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643396|gb|ACN98446.1| putative toluene tolerance protein Ttg2B [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 247

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 68/243 (27%), Positives = 119/243 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G +     +   +++K    L  +++ M  +GV+   ++IL  F TG V+  
Sbjct: 3   FTKFVEHTGEITLFFIKTLIATFKRFPKLKHILKYMEDIGVNAALLIILTGFFTGGVLVV 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +      +F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+IDA+
Sbjct: 63  ETYPTFHKFNAEYLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M ++    L+SPR+ A ++ +P LT+L+  S +IG        Y I   +++ +    
Sbjct: 123 EVMAVNPYSYLVSPRLIAAVVMVPALTVLSYVSGVIGGYFTSVYIYGINEYMYWEKLKDF 182

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +IF GL KA      + IV    G+     +  +G+  TT VV +  +++I+D   
Sbjct: 183 TELKDIFGGLYKAAVFGAVLTIVTSYFGYITKGGAEGVGRSTTTAVVVASVLILILDYFL 242

Query: 365 AIF 367
              
Sbjct: 243 TAL 245


>gi|91201081|emb|CAJ74139.1| strongly similar to ABC-transporter, permease [Candidatus Kuenenia
           stuttgartiensis]
          Length = 260

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 69/247 (27%), Positives = 115/247 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            N        LG +                    +I+Q+ ++GV  V V++L    TG V
Sbjct: 12  GNSLHKFIRELGKMGCFFANALFYMLFPPYLFRRIIKQINFIGVKTVLVIVLTGTFTGMV 71

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q  + L +FGAE      +++  ++E+G ++ A+M+ GR+GSAI AEIG M+I+E++
Sbjct: 72  LALQMYYVLIKFGAEARLGPAVAMSLIKELGPVICALMVTGRAGSAITAEIGIMRISEQV 131

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  M L+  + LI P I A +ISLPLL  +     + G   V      +    +F   
Sbjct: 132 DALDAMALNPYKYLIIPNIIAGVISLPLLNAIFVVLGVFGGYAVGVGLMGVSSGTYFGGI 191

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +      ++F G  K+      I  ++  +GF  G  +  + K  T  VV S  +++I D
Sbjct: 192 NDFVAARDVFEGFYKSLSFGVLITWISCYKGFYTGYGAEGVSKATTQSVVISSVVILIWD 251

Query: 362 SLFAIFY 368
                  
Sbjct: 252 YFMTSLL 258


>gi|58584874|ref|YP_198447.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58419190|gb|AAW71205.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 260

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 115/251 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I             LG       +     +    +L ++ +Q+  +G   +P+V L   
Sbjct: 8   GIRIIGRCFIKLLLRLGSAFIFFIQSLYHCFVPPYYLGNIAKQIIEIGFFSLPIVGLTGI 67

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GAVI  Q +        E     L+++  ++E+G +L ++++ G+ GS+I AEIG+M+
Sbjct: 68  FIGAVIVLQSSLSGPLISPEQIIPKLVTVTIIKELGPVLISLIMVGKVGSSIAAEIGTMR 127

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I E+IDA+ T+ ++  + LI+PRI A +I  P+ TI A+   I G  I     ++    +
Sbjct: 128 ITEQIDALTTLNINPFKYLIAPRILASVIVFPIFTICADLIGIFGGYITAVFKFNHNLNI 187

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +         + N  TGLIKA      I + +   G+     +  +    T+ VV S  +
Sbjct: 188 YIKYTTQFFNMYNFITGLIKATAFGAIISVSSCYYGYHCQEGARGVSIATTSTVVLSSIL 247

Query: 357 VIIIDSLFAIF 367
           +I+ + +  + 
Sbjct: 248 IILANYMITLI 258


>gi|116789794|gb|ABK25388.1| unknown [Picea sitchensis]
          Length = 462

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 115/232 (49%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+  A  +K K    + ++Q+  VG     V +L +   G     Q   + ++ G    
Sbjct: 220 AGQVIARVFKGKIHTRNTLQQLEVVGPGSSGVCLLTAAFVGMAFTIQFVREFTRLGLTRS 279

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T+++IAGR GSA  AE+G+M+++E+ D +R +G D V  LI P
Sbjct: 280 VGGVLALAFSRELSPVVTSIIIAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLIIP 339

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP+LT++    ++  + ++    Y++   +       +    +I + ++K+ 
Sbjct: 340 RVIACCLALPILTLICFSVSLAASVLLADGVYNVSANIILESARRSLHPWDIISAMVKST 399

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 400 VFGGLISVISCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 451


>gi|10086491|gb|AAG12551.1|AC007797_11 Hypothetical Protein [Arabidopsis thaliana]
          Length = 283

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 113/232 (48%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 42  AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 101

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 102 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 161

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 162 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 221

Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                I +++   G      +  +G+  T+ VV S+  + I D + + F+F 
Sbjct: 222 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 273


>gi|149913819|ref|ZP_01902351.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b]
 gi|149812103|gb|EDM71934.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b]
          Length = 261

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 111/251 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +      +    +G V     E      +   +       +  +G   +PVV + +  TG
Sbjct: 10  RLGAQVLAMLGAVGRVTLFALETVTHLMRPPFYAREFGHALVQIGWLSLPVVGMTALFTG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+ E
Sbjct: 70  GALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMKVTE 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+  + ++ L  PR+ A  +++PLL  + +   I+G  +V     D     +  
Sbjct: 130 QIDALTTLSTNPMKYLTLPRVLAATLAVPLLVGVGDVIGIMGGFLVGVGRLDFGAGTYLH 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++ +G+IK       + ++    G   G  +  +G+     VV +  +++ 
Sbjct: 190 NTLDFLETWDVVSGMIKGAVFGFIVALMGCYYGMNSGRGAQGVGRATKAAVVAASVLILA 249

Query: 360 IDSLFAIFYFA 370
            + +    +F+
Sbjct: 250 SNYILTELFFS 260


>gi|323699476|ref|ZP_08111388.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132]
 gi|323459408|gb|EGB15273.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           ND132]
          Length = 267

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 5/248 (2%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G +     +     +   G    ++RQ+Y++GV  V V+ LI   TG V+  Q
Sbjct: 19  REVVDEIGSLTLFLLDSMRLVFAGLGQFPKIVRQIYFIGVQSVSVIALIGLFTGMVMGMQ 78

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             + LS FGA+ F    +++  +RE+  +LTA+M+ GR+GSA+ AEIG M+I+E+IDA+ 
Sbjct: 79  LYYALSVFGADGFLGTGVALSMVRELAPVLTAIMLTGRAGSAMTAEIGVMRISEQIDALT 138

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            M ++ +R L++P++ A +IS P+LT   N  A+ G  +   K       V++SR   + 
Sbjct: 139 IMDINPMRYLVAPKMAACLISFPILTAFFNLIALWGGWLTGVKLLGANAGVYWSRVSGSL 198

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIII 360
              +I  G IK+      +  +   EG+             + +  T+ VV+S  I++  
Sbjct: 199 DWDDIEGGFIKSIVFGLLVCTICCFEGYNTHLRSGHAGPEGVSQSTTSAVVKSCVIILAA 258

Query: 361 DSLFAIFY 368
           D +     
Sbjct: 259 DYILTSLL 266


>gi|326405357|ref|YP_004285439.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|325052219|dbj|BAJ82557.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 260

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 123/253 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +     +LG +        +   +    L +  R +  +G S +PVV L +  
Sbjct: 8   IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F +      ++ +   RE+G +L  +M+AGR+GSAI AE+G+M++
Sbjct: 68  TGMVLALQSYIGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  D +R L++PR+ A +I+LPLL ++A+   + G  +V           +
Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +     ++ +GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247

Query: 358 IIIDSLFAIFYFA 370
           + +D L    +F+
Sbjct: 248 LALDYLMTQAFFS 260


>gi|284049033|ref|YP_003399372.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM
           20731]
 gi|283953254|gb|ADB48057.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM
           20731]
          Length = 260

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 9/260 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G+K+V     +    ++        G               ++RQM  +G   +P+V 
Sbjct: 9   WVGRKMVDLCARTGRVVNLFLEACRAAGTA---------DRREVLRQMARLGADSLPIVS 59

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +    TG V++ Q A +  +FGA      +++I   RE+  +LT V++AGR G+AI AEI
Sbjct: 60  MTILCTGMVMSVQTAKEFVRFGAADSVGGIVAIAMGRELSPILTGVVVAGRIGAAIAAEI 119

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+MK+ E+IDA+R M +  +R L++PR+ A+++ +P+L + AN    +G   V   Y  I
Sbjct: 120 GTMKVTEQIDALRVMAVSPIRFLVTPRLLAIVLMMPVLVVYANLVGDVGGWFVAENYAGI 179

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              +F           +I  GLIK       I  +   +G      +  +G   T  VV 
Sbjct: 180 SSHMFLESIRGFIEPWDIIGGLIKGAVFGAIIATIGCHKGLNAQQGAEGVGMATTKSVVL 239

Query: 353 SISIVIIIDSLFAIFYFAIG 372
           SI ++ I +   ++  +  G
Sbjct: 240 SIILIFIANYFLSVILYVHG 259


>gi|167645294|ref|YP_001682957.1| hypothetical protein Caul_1329 [Caulobacter sp. K31]
 gi|167347724|gb|ABZ70459.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 270

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 121/252 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +   ++G V         ++     FL  L RQ   +G   +PVV L +  
Sbjct: 15  IRALGRSTLAAVRMVGGVGVFAVRGTVAALTPPWFLGQLWRQFVAIGFFSLPVVGLTAVF 74

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 75  TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+RT+  D  R L+ PR+ A ++ LP+LT +A+   + G  +V  +  D   AV+
Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPILTAVADTIGVAGGWLVATRVLDFSSAVY 194

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ +GLIKA      + ++    G+     +  +G+  T  VV S  ++
Sbjct: 195 IRNTLDFLQGWDVISGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAILI 254

Query: 358 IIIDSLFAIFYF 369
              D L   F+ 
Sbjct: 255 FASDYLLTTFFT 266


>gi|160872193|ref|ZP_02062325.1| toluene tolerance protein Ttg2B [Rickettsiella grylli]
 gi|159120992|gb|EDP46330.1| toluene tolerance protein Ttg2B [Rickettsiella grylli]
          Length = 262

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +K+ +            G       +      +F+     LI Q+Y++GV  + ++++  
Sbjct: 5   EKLQQLGQRGLRLLVNFGRATLFLTQLLIRKPRFRKSFPLLIEQLYFIGVLSLIIMVISG 64

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L++FGA      L+++  +RE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 65  LFIGMVVGLQGYNTLNKFGASQQLGQLVALSVVRELGPVITALLFAGRAGSALTAEIGLM 124

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  MG+D +  +ISPR W   IS+P L I+ +  AI G  +V   +  +   
Sbjct: 125 KSTEQLASMEMMGIDPLWRVISPRFWGGFISMPFLMIIFSTVAIWGGYLVGVVWLGVDGG 184

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      +I  G+IK+      +  +A+ +G+        +G+  T  VV S 
Sbjct: 185 TFWSAMQSAVNFHDDIINGIIKSIVFGGVVTWIAVFQGYDTIPTPQGVGRATTHTVVYSS 244

Query: 355 SIVIIIDSLFAIFYFA 370
             ++ +D +       
Sbjct: 245 LAILGLDFVLTAVMMG 260


>gi|328952205|ref|YP_004369539.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452529|gb|AEB08358.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 255

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 116/252 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +             LG +     +      +         RQ+ ++GV    +V+L    
Sbjct: 4   LTTLGRLWVHFLQELGGMALLLAQAGLWLPRRPYRWRHFFRQLEFIGVKSFFIVVLTGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q  +   +FG E      +++   RE+G +LT++M+A R+GSA+ AE+G+MK+
Sbjct: 64  TGMVLALQAYYGFRKFGGESLLGGAVALSMTRELGPVLTSLMVAARAGSAMAAELGAMKV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+  M +  V  L  PR+ A +I  PLLT++A +  I+G   V     D+    F
Sbjct: 124 TEQVDALLAMAVQPVHYLALPRLLAAVIMTPLLTVIAVYIGIVGGYFVGVILLDVNPGTF 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             +       ++++ GL K+      + +++  EG      +  +G   T  VV S   +
Sbjct: 184 MQKMLEMVNSSDLYNGLFKSVIFGLLLALISCYEGLQAKGGAEGVGLVTTRAVVYSAISI 243

Query: 358 IIIDSLFAIFYF 369
           +I D +     F
Sbjct: 244 LIADYILTALLF 255


>gi|148261852|ref|YP_001235979.1| hypothetical protein Acry_2870 [Acidiphilium cryptum JF-5]
 gi|146403533|gb|ABQ32060.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5]
          Length = 260

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 123/253 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +     +LG +        +   +    L +  R +  +G S +PVV L +  
Sbjct: 8   IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+A Q     S+F +      ++ +   RE+G +L  +M+AGR+GSAI AE+G+M++
Sbjct: 68  TGMVLALQSYVGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  D +R L++PR+ A +I+LPLL ++A+   + G  +V           +
Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +     ++ +GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247

Query: 358 IIIDSLFAIFYFA 370
           + +D L    +F+
Sbjct: 248 LALDYLMTQAFFS 260


>gi|16127925|ref|NP_422489.1| ABC transporter permease [Caulobacter crescentus CB15]
 gi|221236745|ref|YP_002519182.1| organic solvent resistance transport system permease [Caulobacter
           crescentus NA1000]
 gi|13425459|gb|AAK25657.1| ABC transporter, permease protein, putative [Caulobacter crescentus
           CB15]
 gi|220965918|gb|ACL97274.1| organic solvent resistance transport system permease [Caulobacter
           crescentus NA1000]
          Length = 269

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 123/254 (48%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +   ++G V         ++     FL  L RQ+  +G   +PVV L +  
Sbjct: 15  IQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAIGFFSLPVVGLTAVF 74

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 75  TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+RT+  D  R L++PR+ A +++LPLLT +A+   I G  +V  +  +    V+
Sbjct: 135 TEQIDAMRTLSTDPFRYLVAPRLLAAVLTLPLLTAVADIIGIAGGWLVATRVLEFNPTVY 194

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I +GLIKA      + ++    G+     +  +G+  T  VV S  ++
Sbjct: 195 IRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254

Query: 358 IIIDSLFAIFYFAI 371
              D L    +  +
Sbjct: 255 FATDYLLTTLFTHM 268


>gi|317152440|ref|YP_004120488.1| hypothetical protein Daes_0725 [Desulfovibrio aespoeensis Aspo-2]
 gi|316942691|gb|ADU61742.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 268

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 5/252 (1%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                     LG +        A  +   G     +RQ+Y++GV  V V+ LI   TG V
Sbjct: 16  GRMFGRVLDELGGMFLFFLSAVALMFAGWGQFSKTVRQIYFIGVQSVTVIALIGLFTGMV 75

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  Q  + LS FGA+ F    +++  +RE+  +L A+M+ GR+GSA+ AEIG M+I+E+I
Sbjct: 76  MGMQLYYALSVFGADGFLGTGVALSMVRELAPVLAAIMLTGRAGSAMTAEIGVMRISEQI 135

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++ +R L++P++ A +IS P+L    N  A+ G  +   K       V+++R 
Sbjct: 136 DALTIMGINPMRYLVAPKMAACLISFPILNAFFNLIALWGGWLTGVKLLGANEGVYWARV 195

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISI 356
             +   ++I  G IK+   A  +  +   EG+             + +  T  VV+S  I
Sbjct: 196 QGSLDWSDIQGGFIKSMVFAVLVCTICCFEGYYTHTRSGHAGPEGVSQSTTNAVVKSCVI 255

Query: 357 VIIIDSLFAIFY 368
           ++  D +     
Sbjct: 256 ILAADYVLTSLL 267


>gi|39996998|ref|NP_952949.1| transporter [Geobacter sulfurreducens PCA]
 gi|39983886|gb|AAR35276.1| transporter, putative [Geobacter sulfurreducens PCA]
 gi|298506015|gb|ADI84738.1| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 257

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 2/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +      S   +LG ++   G       +    L S+  QM  +G   VP+  +++F  G
Sbjct: 6   RVGKKVLSFHEVLGEMLMLLGRTVWFFREAPRNLPSIFNQMAIIGYETVPIASVMAFFVG 65

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   +L ++G +     ++ +  +RE+G ++T+ ++AGR GSA+ AEIG MK+ E
Sbjct: 66  MVLALQTGVELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRVGSAMAAEIGVMKVYE 125

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY--YDIPFAVF 297
           EIDA++T+ ++ VR L  PR+ A ++ +P L I AN   I+G +I+   +    I ++ +
Sbjct: 126 EIDALKTLDINPVRYLAMPRLIACLVCVPALVIFANAVGIVGGAIMSHLHPKIFISYSTY 185

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +    +   L  +  GL+KA      I +VA   GF     +  + +  T  VV S  ++
Sbjct: 186 YDSLKTALKLKEVGAGLVKATVFGGIIALVACYTGFKTSGGARGIAQATTRAVVLSFMLI 245

Query: 358 IIIDSLFAIFYF 369
           ++ D        
Sbjct: 246 LVADYFLTRILM 257


>gi|39995923|ref|NP_951874.1| hypothetical protein GSU0817 [Geobacter sulfurreducens PCA]
 gi|39982687|gb|AAR34147.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504937|gb|ADI83660.1| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 257

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/249 (28%), Positives = 130/249 (52%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I K    +      +G ++        +     G  + + +Q++++G   + V++L + 
Sbjct: 5   SIEKIGALTLFVVREMGKMLIFLTYALVNIVIRPGKPIHIYKQIHFIGAKSLFVIVLTAA 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+  QG + L++FG+E      +++  +RE+G +L+A+M+ GR+GSAI AEIG  K
Sbjct: 65  FTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLSALMVVGRAGSAITAEIGIKK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I E+IDA++TM L+  + L+SP+I A +I+LPLL  + +   I G  +V  K   +    
Sbjct: 125 ITEQIDALKTMALEPFKYLVSPKILAALIALPLLCAIFDVVGIYGGYVVGVKLLGVNPGA 184

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +FS    +    ++++G++K+      I  V   +G+     +  + +  T  VV S  +
Sbjct: 185 YFSEMERSVEWKDVWSGIVKSFSFGGIIAWVCCYKGYHASHGAEGVSRATTEAVVMSSVL 244

Query: 357 VIIIDSLFA 365
           V+I D    
Sbjct: 245 VLIWDYFLT 253


>gi|291279509|ref|YP_003496344.1| ABC transporter permease [Deferribacter desulfuricans SSM1]
 gi|290754211|dbj|BAI80588.1| ABC transporter, permease [Deferribacter desulfuricans SSM1]
          Length = 256

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 128/248 (51%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +  +  G +     +F   ++     +  L +QM ++GV+ + V+IL    TG V
Sbjct: 9   GAPILNFIYGSGRIFLFFIDFFRWAFIPPYRVRLLFKQMEFIGVNSLSVIILTGTFTGMV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
            A Q      +FGAE     ++ +   RE+G +L+++M+A R+GSAI AEIG+M++ E+I
Sbjct: 69  FAFQSYIGFHRFGAEYMVGTVVGLGMARELGPVLSSIMVAARAGSAIAAEIGTMRVTEQI 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  + ++ V+ L+ PR+ A +I +P+L I+A F  ++G   V  +   I   ++    
Sbjct: 129 DALYALAVEPVQYLVVPRMLAGVIVMPILNIIAVFCGVVGGYFVGVEILGINKTLYLEYM 188

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +      +I+ G+IKA      + +V   +GF     +  +GK  T  VV S  ++++ D
Sbjct: 189 YRYVDFDDIYNGIIKATVFGLILTLVGCYKGFYTSGGAEGVGKSTTESVVLSSVLILVFD 248

Query: 362 SLFAIFYF 369
            +   F F
Sbjct: 249 YILTAFMF 256


>gi|89054229|ref|YP_509680.1| hypothetical protein Jann_1738 [Jannaschia sp. CCS1]
 gi|88863778|gb|ABD54655.1| protein of unknown function DUF140 [Jannaschia sp. CCS1]
          Length = 260

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 117/251 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +      +G +     +          ++    RQ   +G   +PVV L +F TG
Sbjct: 9   ALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVVGLTAFFTG 68

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +A Q     ++F AE     +++I   RE+G +L  +M+AGR  +AI AEI +MK+ E
Sbjct: 69  GALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAEIATMKVTE 128

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+RT+    ++ L +PR+ A  +SLP+L  + +   I G  +V     D   A + S
Sbjct: 129 QIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSIGIFGGYLVSTSRLDFNPAAYLS 188

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 T+ ++ +GL+K       + ++    G   G  +  +G+  T  VV +  +++ 
Sbjct: 189 NTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVVSASILILA 248

Query: 360 IDSLFAIFYFA 370
            + L    +F+
Sbjct: 249 ANYLLTEAFFS 259


>gi|218885146|ref|YP_002434467.1| hypothetical protein DvMF_0038 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756100|gb|ACL06999.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 381

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 158/369 (42%), Gaps = 9/369 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                +G W      + A         +     + I+    + + D+  A  +   +   
Sbjct: 20  LRLAVSGAWNLDAPPDGAARASAMARLREPGVATVILVAEGLGDWDSSLAIFVAGVVRAC 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             +      S     L  L+  +        +   +   ++   L   IG+ ++      
Sbjct: 80  RERNLSVDTSGLPAGLIRLVDLSFAV----PERAGAARGDARSGLLERIGEAVLALPMPV 135

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
            S    +G V              +   LL     M   G + +P+V LIS + G ++A 
Sbjct: 136 GSTLDFIGEVAFALYRLARGKADMRRRDLLQF---MSESGSAALPIVSLISMLVGLILAF 192

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            GA QL  FGA+I+   L++I  +R +G ++T + +AGR+G++  A +G+M++NEE+DA+
Sbjct: 193 VGAVQLRVFGAQIYVASLVAIAMVRVMGAIMTGITMAGRTGASYAAILGTMQVNEEVDAL 252

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            TMGL  V  L+ PR+ AL++ LPLLT+ A+   ++G  IV     D+    + +     
Sbjct: 253 ATMGLRPVEQLVLPRLLALVVMLPLLTVYADLMGMLGGFIVGVFMLDLNPMEYLNATREA 312

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +LAN++ G+         + +     G   G  ++++G   T  VV  I  +I+  +  
Sbjct: 313 LSLANLWIGITHGAVFGVVVALCGCYHGMRCGRSASAVGAATTAAVVSGIVSIIVCTAFI 372

Query: 365 AIFYFAIGI 373
            +    +GI
Sbjct: 373 TVACEVLGI 381


>gi|149202595|ref|ZP_01879567.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035]
 gi|149143877|gb|EDM31911.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035]
          Length = 261

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 115/253 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        S    +G +     +  +   +   +    +  +  +G   +PVV + +  
Sbjct: 8   LASIGRTVLSGLAAIGRIALFAADTISQLARPPFYFREFLHALVQIGWLSLPVVGMTALF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+
Sbjct: 68  TGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMKV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +V     D   A +
Sbjct: 128 TEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVGVGRLDFSAATY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ +GLIK       + ++    G   G  +  +G+   + VV +  ++
Sbjct: 188 LHNTIDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAASVLI 247

Query: 358 IIIDSLFAIFYFA 370
           +  + L    +FA
Sbjct: 248 LASNYLLTELFFA 260


>gi|260753847|ref|YP_003226740.1| hypothetical protein Za10_1620 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856508|ref|YP_163326.2| hypothetical protein ZMO1591 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258553210|gb|ACV76156.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775512|gb|AAV90215.2| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 273

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 115/255 (45%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    +G +                +      + + +G + +PVV L +
Sbjct: 19  RCLAAIGRLFIAFLAGIGRIARFGMTILLRGALPPYYPGRFFHEFFEIGWNSLPVVALTA 78

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG+ +AQQ     S+F A+      + I  +RE+G +L  +M+ GR  SAI AE+G+M
Sbjct: 79  VFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAAELGAM 138

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+ T+  D  R L++PR++A  ++LP L +LAN   I G  ++          
Sbjct: 139 RVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKLGFNPE 198

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +           ++   L+K+      + ++    GF     +  +G+  T  VV +  
Sbjct: 199 NYLKVTREFLKAEDVHMALVKSAVFGFLVALLGCYNGFFATGGAAGVGRSTTRAVVSAFI 258

Query: 356 IVIIIDSLFAIFYFA 370
           +++  + +  +F+F 
Sbjct: 259 MILFSNLMITMFFFG 273


>gi|146277114|ref|YP_001167273.1| hypothetical protein Rsph17025_1067 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555355|gb|ABP69968.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 260

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 114/252 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      +G +        +  ++   +    +  +  +G   +PVV L +  
Sbjct: 7   IAALGRATLGALAAIGRIALFAAAVISHLFRPPFYPREFLNALIQIGWLSLPVVGLTAIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+
Sbjct: 67  TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I G  +V     D   A +
Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPVLVAVGDSIGIAGGWLVGVNRLDFNSATY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    + ++ +GL+K       + ++    G   G  +  +G+   + VV +  ++
Sbjct: 187 IKNTVDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246

Query: 358 IIIDSLFAIFYF 369
           +  + L    +F
Sbjct: 247 LAANYLLTEVFF 258


>gi|319954485|ref|YP_004165752.1| hypothetical protein Celal_2978 [Cellulophaga algicola DSM 14237]
 gi|319423145|gb|ADV50254.1| protein of unknown function DUF140 [Cellulophaga algicola DSM
           14237]
          Length = 258

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G +   +G F   + +        +RQ Y +G   + +V++  F+ G V+  
Sbjct: 9   IKQALTEIGELTYFSGRFFREALRPPFEFNEFLRQCYQIGNRSLTLVLVTGFIIGLVLDL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    + QFGA  +  +++ I  +RE+G ++TA++ AGR  S I AE+GSM++ E+IDA+
Sbjct: 69  QSRPTMIQFGAISWMPNMVGISIVRELGPVITALVCAGRISSGIGAELGSMRVTEQIDAM 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
              G +  + L+  R+ A I+ LPLL IL++  ++ G++++     ++ F ++F+     
Sbjct: 129 EVSGTNPFKYLVVTRVMASILMLPLLVILSDAVSLFGSALIENIKGNVSFQLYFNTIFDA 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   +IK  F   AIG+V   +G+     +  +G    T VV +  ++ +ID + 
Sbjct: 189 LSYTDLIPAIIKTFFFGFAIGLVGCFKGYYCKKGTAGVGIAANTAVVMTSLLLFVIDFV- 247

Query: 365 AIFYFAI 371
           A+F   I
Sbjct: 248 AVFISNI 254


>gi|241762420|ref|ZP_04760498.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373014|gb|EER62672.1| protein of unknown function DUF140 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 273

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 115/255 (45%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    +G +                +      + + +G + +PVV L +
Sbjct: 19  RCLAAIGRLFIAFLAGIGRIARFGITILLRGALPPYYPGRFFHEFFEIGWNSLPVVALTA 78

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG+ +AQQ     S+F A+      + I  +RE+G +L  +M+ GR  SAI AE+G+M
Sbjct: 79  VFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAAELGAM 138

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+ T+  D  R L++PR++A  ++LP L +LAN   I G  ++          
Sbjct: 139 RVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKLGFNPE 198

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +           ++   L+K+      + ++    GF     +  +G+  T  VV +  
Sbjct: 199 NYLKVTREFLKAEDVHMALVKSTVFGFLVALLGCYNGFFATGGAAGVGRSTTRAVVSAFI 258

Query: 356 IVIIIDSLFAIFYFA 370
           +++  + +  +F+F 
Sbjct: 259 MILFSNLMITMFFFG 273


>gi|299136991|ref|ZP_07030174.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
 gi|298601506|gb|EFI57661.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
          Length = 259

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 128/255 (50%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           K+V     + +    +      +G    + +    ++     QM  +GV  +P+V+L  F
Sbjct: 2   KLVSPGAFAKNVVASVQEYSLLSGRAIGNLFTNPRYIADTFTQMDSIGVGSLPIVVLTGF 61

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+A Q A  L +FGA   +  L+++  ++E+G +LT +M++GR+ S + +E+GSMK
Sbjct: 62  FTGCVLALQAAVSLKEFGAINMTGKLVALSMVKELGPVLTGLMVSGRNASGMASELGSMK 121

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+R +G D +R L++PR+ A +  L  LTI+++     G ++V      +    
Sbjct: 122 VTEQIDAMRALGTDPIRKLVTPRLVATVFMLFFLTIISDACGTGGGALVAVVLLRLNGPA 181

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           FF   + +    ++  GL+K  F    I  +    G      +  +GK  T  VV S  +
Sbjct: 182 FFHTAYMSLVGGDVVEGLVKPLFSGFIIATIGCYYGLRTTGGTQGVGKATTQAVVASSVL 241

Query: 357 VIIIDSLFAIFYFAI 371
           +I++D L       I
Sbjct: 242 IILVDFLVTQLMIGI 256


>gi|225871870|ref|YP_002753324.1| transporter, putative ER-chloroplast lipid translocase (ECLT)
           family [Acidobacterium capsulatum ATCC 51196]
 gi|225792942|gb|ACO33032.1| transporter, putative ER-chloroplast lipid translocase (ECLT)
           family [Acidobacterium capsulatum ATCC 51196]
          Length = 259

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 120/238 (50%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                T     + ++   +   ++ Q  Y+G+  +P+VIL  F TG V+A   A  L+QF
Sbjct: 19  EYALLTTRALLNLFRRPFYWSDIVFQADYIGIGSLPIVILTGFFTGGVLALNSASTLAQF 78

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA   +  L+S+  ++E+G +LT++M++GR+ S + +E+GSM + E++DA+R +G D ++
Sbjct: 79  GATAVTGQLVSLSMIKELGPVLTSLMVSGRNASGMASELGSMIVTEQVDAMRALGTDPMK 138

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PRI A +  +  LTI+++    +G + V         + +F   +      ++F G
Sbjct: 139 KLVMPRIVATVCMMFFLTIVSDAIGTLGGAFVSGILLGQNTSQYFHTAYQALRYPDVFEG 198

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           LIK       I  +    G      +  +G+  T  VV +  ++I  D   +    +I
Sbjct: 199 LIKPVIFGFIIATIGCFYGMKTRGGTQGVGRSTTQAVVVASVLIIATDFFISQIVISI 256


>gi|94969917|ref|YP_591965.1| hypothetical protein Acid345_2890 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551967|gb|ABF41891.1| protein of unknown function DUF140 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 258

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 117/237 (49%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G    + +    +L   ++Q   +GV  +P+VIL  F TGA +A   +  L +F
Sbjct: 19  EYAQLAGRSLTNLFSQPRYLSDTLQQADLIGVGSLPIVILAGFFTGAALALNTSATLQKF 78

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G+   +  L+S   +RE+G +LT +M+AGR+ S + +E+GSMK+ E+IDA+R +G D  +
Sbjct: 79  GSITLTGQLVSYSMVRELGPVLTGLMVAGRNSSGMASELGSMKVTEQIDAMRALGTDPSK 138

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PR+ + ++ L  L+I+++   + G  I+ W    +    +++  +      ++  G
Sbjct: 139 KLVTPRVISTVVMLFFLSIISDLLGMAGGFIISWTLLGLDANQYWTTAYQALVFQDVLMG 198

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           L+K       I  V    G      +  +G+  T  VV +  ++I  D     F   
Sbjct: 199 LVKPVVFGFFIASVGCYYGMNATGGTQGVGRATTQAVVTASVLIIASDLFITRFLMV 255


>gi|152990804|ref|YP_001356526.1| ABC transporter, permease [Nitratiruptor sp. SB155-2]
 gi|151422665|dbj|BAF70169.1| ABC transporter, permease [Nitratiruptor sp. SB155-2]
          Length = 263

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 113/249 (45%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                    G  I    +     +K    +   ++QM  +GV  + V+ L +  TG V A
Sbjct: 14  QFFRMLERFGAFILFQIKILPLFFKPPYRVKETLQQMDIIGVGSLFVISLTAIFTGLVEA 73

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q      +FGAE F    + +   +E+G +  A+M+  R+ SA+ AE+G+M++ E+IDA
Sbjct: 74  IQLYHGFHKFGAEEFMGYTIFVSISKELGPVFGALMLVSRAVSAMTAELGTMRVTEQIDA 133

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           I T+ +D  + LI PR+ A  +S P+L I+  F   I A ++      +    + +   +
Sbjct: 134 IDTLAVDSKKYLIVPRVIAATLSTPILVIVFVFLGNIAAYLISVYALGVNPNSYKNTITT 193

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               ++I TG+IKA      I I+    G+     +  +G   T  VV +   V + +  
Sbjct: 194 YLEFSDIGTGIIKAFVFGYLISIIGTYIGYFTRGGARGVGLSTTKSVVYAAMTVFVANYF 253

Query: 364 FAIFYFAIG 372
            +  +  + 
Sbjct: 254 LSTLFLYLD 262


>gi|126727195|ref|ZP_01743032.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2150]
 gi|126703623|gb|EBA02719.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium
           HTCC2150]
          Length = 258

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 115/253 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +      +      +G V            +   ++    + +  +G   +PVV L + 
Sbjct: 4   ALATLGQSTLGLLAAIGRVCLFAFSVVTHMLRPPFYIREFSQALLNIGFFSLPVVGLTAL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +A Q     ++F AE     ++SI  +RE+G +L+ +M+AGR  ++I AE+ SMK
Sbjct: 64  FTGGALALQIYAGGARFNAEAVVPSIVSIGMVRELGPVLSGLMVAGRVSASIAAELASMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+  + ++ L  PR+ A  ++LP+L  + +   I G  +V     D   A 
Sbjct: 124 VTEQIDALVTLSSNPLKYLAVPRVLAATLTLPILVAVGDSIGIFGGYLVGVNSLDFNAAG 183

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +     +   L ++ +GLIK       + I+    G   G  +  +G+     VV S  +
Sbjct: 184 YLKNTVTFLELWDVTSGLIKGAVFGFILSIMGCYHGMNSGRGAQGVGRATINAVVSSSIL 243

Query: 357 VIIIDSLFAIFYF 369
           ++  + L    +F
Sbjct: 244 ILAANYLLTSLFF 256


>gi|209543397|ref|YP_002275626.1| hypothetical protein Gdia_1228 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531074|gb|ACI51011.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 383

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 17/377 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVV----MAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           +G TV   +GNW +         +       + ++           A+   DT     + 
Sbjct: 17  DGATVIVLSGNWLAQGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTGLIAFLW 76

Query: 60  YFMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
              ++    H  ++   +     +L  L+          +    +            +G 
Sbjct: 77  DLKQRATQAHLDLRTDTLPDSARKLLDLLPEAPPPPPTPRPRTFAP--------VTALGA 128

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             ++ + +  +   +         E      + +     L+  +   G S + +V +++F
Sbjct: 129 FTIESLTEIGTVTELGVETARGGLEAVTGRGRMRSI--DLMSNIRDAGPSALLIVSVVNF 186

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + GA++A  GA QL +F A+I+   L+ I  +RE+  ++TA+++AGR+G A  A I +M+
Sbjct: 187 LVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQ 246

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            NEEIDA+   G+     LI P I  L+ ++P L +      ++G   V      +  A 
Sbjct: 247 GNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAG 306

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +F +  +   L     G IK+ F A  IG+ + + G   G  +  +G   T  VV  I  
Sbjct: 307 YFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVG 366

Query: 357 VIIIDSLFAIFYFAIGI 373
           VI +D++FA+    +GI
Sbjct: 367 VITLDAIFAVIATTLGI 383


>gi|322420104|ref|YP_004199327.1| hypothetical protein GM18_2600 [Geobacter sp. M18]
 gi|320126491|gb|ADW14051.1| protein of unknown function DUF140 [Geobacter sp. M18]
          Length = 258

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +GK+++ F       A ++G ++    E           + S++ QM  +G  
Sbjct: 1   MTQVFEPLGKRVLYFYQVMGEMAILMGKIVYFVREA-------PRNIPSILAQMAIIGWD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ +D VR L  PR  A II +P L I A+   I G +++ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIICVPALVIYADLIGITGGALIS 173

Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                  + +A ++    +   +  I  GL K+      I +V+   GFA    +  +G+
Sbjct: 174 NLHPQIFVSYATYYDSLTAALKMKEIGIGLTKSMVFGAIIALVSCYVGFATSGGARGIGQ 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S  +++I D +      
Sbjct: 234 STTRSVVLSFMLILIADYVLTRLLM 258


>gi|148265726|ref|YP_001232432.1| hypothetical protein Gura_3706 [Geobacter uraniireducens Rf4]
 gi|146399226|gb|ABQ27859.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   IGKK++ F         +LG  I    E           + S+  QM  +G  
Sbjct: 1   MTGVFDRIGKKVILFHEIVGEMLILLGQTIYFFREA-------PRNIASIFAQMAIIGYE 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G++     ++    +RE+G ++T+ ++AGR+GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGSQNIIGAIVGHSMVRELGPVMTSFLVAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ ++ VR L  PR  A I+ LP L I ++F  I G +I+ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDINPVRYLAMPRFIACIVCLPALVIYSDFIGITGGAIIS 173

Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
             +    + ++ ++    +      I  GLIKA      I +V+   GF     +  +G 
Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFHEIGIGLIKAFVFGAIIALVSCYIGFKTSGGARGIGI 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S  ++++ D        
Sbjct: 234 STTRSVVLSFMLILVADYFLTRILM 258


>gi|163788065|ref|ZP_02182511.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1]
 gi|159876385|gb|EDP70443.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1]
          Length = 260

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 128/247 (51%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + K      S    +G +   TG F    +K       L+ Q Y +G   + +V +  F
Sbjct: 3   GMHKIKAQLDSFLIEIGDMSYFTGRFFKELFKRPFEFKELLNQCYSMGNKSLLLVGITGF 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G V+  Q    L +FGA  +   ++SI  +REIG +LTA++ AGR GS I AEIGSMK
Sbjct: 63  IIGLVLTLQTRPTLMEFGAVSWMPSMVSISIVREIGPILTALVCAGRIGSGIGAEIGSMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+   G +  + L+  R+ A+ + LPLL I+ +  A++G+ +V     D+ F +
Sbjct: 123 VTEQIDAMEVSGTNPFKYLVVTRVLAVTLMLPLLVIIGDAVALLGSYLVESVKGDVSFVL 182

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +F++        +I    IK+ F   AIGIV   +G+     +  +GK   T VV +  +
Sbjct: 183 YFNQVFDALKFGDIMPATIKSFFFGLAIGIVGCYKGYYCKKGTAGVGKAANTAVVFTSLL 242

Query: 357 VIIIDSL 363
           + IID +
Sbjct: 243 LFIIDFI 249


>gi|77463016|ref|YP_352520.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126461890|ref|YP_001043004.1| hypothetical protein Rsph17029_1122 [Rhodobacter sphaeroides ATCC
           17029]
 gi|77387434|gb|ABA78619.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126103554|gb|ABN76232.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 260

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 116/252 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      +G +    G   +  ++   +   L+  +  +G   +PVV L +  
Sbjct: 7   IAALGRATLGMLAAVGRIALFAGAVVSHIFRPPFYPRELLTALIQIGWLSLPVVGLTAIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+
Sbjct: 67  TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I G  +V     D   A +
Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLVGVNRLDFNSATY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    + ++ +GL+K       + ++    G   G  +  +G+   + VV +  ++
Sbjct: 187 IKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246

Query: 358 IIIDSLFAIFYF 369
           +  + L    +F
Sbjct: 247 LAANYLLTEVFF 258


>gi|305664733|ref|YP_003861020.1| organic solvents resistance ABC transporter [Maribacter sp.
           HTCC2170]
 gi|88707855|gb|EAR00094.1| ABC-type transport system involved in resistance to organic
           solvents [Maribacter sp. HTCC2170]
          Length = 264

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 121/246 (49%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++ +         +G + +    F   + K       L+RQ Y +G   + +V +  F+
Sbjct: 8   TIQSVQKLRQFFVEIGELSNFAMRFFKEALKPPYEFKELLRQCYNMGNRSLVLVGVTGFI 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  Q    L +FGA  +  +++ I  +REIG ++TA++ AGR  S I AE+GSM++
Sbjct: 68  IGLVLTLQSRPTLIEFGAVSWMPNMVGISIVREIGPVITALICAGRIASGIGAELGSMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+   G +  + L+  RI A  + LPLL I  +  A+ G+++V     ++ F ++
Sbjct: 128 TEQIDAMEVSGTNPFKYLVVTRIMATTLMLPLLVIFGDLVALYGSALVENLKGNVSFQLY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           F+         ++    IK+ F    IG+V   +G+     +  +G    T VV +  ++
Sbjct: 188 FNTVFDALEFGDLIPATIKSFFFGFTIGLVGCYKGYYSKKGTAGVGVAANTAVVLASLLL 247

Query: 358 IIIDSL 363
             +D +
Sbjct: 248 FFVDFI 253


>gi|221638873|ref|YP_002525135.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides
           KD131]
 gi|221159654|gb|ACM00634.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides
           KD131]
          Length = 260

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 116/252 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      +G +    G   +  ++   +   L+  +  +G   +PVV L +  
Sbjct: 7   IAALGRATLGMLAAVGRIALFAGAVVSHLFRPPFYPRELLTALIQIGWLSLPVVGLTAIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I AEIG+MK+
Sbjct: 67  TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I G  +V     D   A +
Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLVGVNRLDFNSATY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    + ++ +GL+K       + ++    G   G  +  +G+   + VV +  ++
Sbjct: 187 IKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246

Query: 358 IIIDSLFAIFYF 369
           +  + L    +F
Sbjct: 247 LAANYLLTEVFF 258


>gi|46447386|ref|YP_008751.1| hypothetical protein pc1752 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401027|emb|CAF24476.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 240

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 119/219 (54%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           +     + +  Q++ +GV  +PVV +  F TG V+A Q  FQLS  G    +  +++   
Sbjct: 5   RRPPTWILIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAKAM 64

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           L E+G +LTA M+ GR G+A+ AE+G+M++ E+IDA+RTM ++ +  L++PR  A +I +
Sbjct: 65  LVELGPVLTAFMVTGRVGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMIMM 124

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           PLLT+ +    I G  ++   +Y +P + F           +  +G++KA      I  +
Sbjct: 125 PLLTVFSAIMGIFGGYLIAVYFYKMPASSFIDPLPLHINTFDFISGMVKAFVFGIIIVTI 184

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +  +G      +  +G+  T  VV   S+++II+ +  +
Sbjct: 185 SCYKGMKTRGGAAGVGRSTTNSVVICYSVILIINFILTL 223


>gi|312887098|ref|ZP_07746702.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311300410|gb|EFQ77475.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 256

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 130/255 (50%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  I D+ S     G +   TG F +   + +  +  L+ Q Y +G    P++ L  F+ 
Sbjct: 1   MALIEDTRSFLDETGSMAKFTGHFFSHGLRPRFEVKELLGQCYTIGYKSFPLIGLTGFIM 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+  Q    L  +G +     ++ I  +REIG ++TA++ AG+ GS+I AE+GSMK+ 
Sbjct: 61  GLVLTMQLRPSLVSYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E+IDA+   G +  + L++ R+ A  + LP+LT+L +  ++ GA I +          FF
Sbjct: 121 EQIDAMEVSGTNPYKYLVATRVLATTLMLPILTVLGDAISLFGAYIGVNLSSVTSLHFFF 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++   + + ++I   + K  F   A+GI+   +GF     +  +G    + VV S  ++ 
Sbjct: 181 TQVFQSLSFSDILPAITKTFFFGFAVGIIGCYKGFNSSKGTQGVGVSANSAVVLSSVLIF 240

Query: 359 IIDSLFAIFYFAIGI 373
           IID L   F   +G+
Sbjct: 241 IIDLLAVQFTNILGL 255


>gi|197119107|ref|YP_002139534.1| transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197088467|gb|ACH39738.1| transporter membrane protein of unknown function DUF140 [Geobacter
           bemidjiensis Bem]
          Length = 258

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +GK+++ F         + G ++    E           + S++ QM  +G  
Sbjct: 1   MTQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREA-------PRNVQSILTQMAVIGWD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ +D VR L  PR  A I+ +P L I ++   IIG +++ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173

Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                  + +A ++        +  I  GL K+      I +V+   GF+    +  +G+
Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233

Query: 345 KVTTCVVQSISIVIIIDSLFA 365
             T  VV S  ++++ D +  
Sbjct: 234 STTRSVVLSFMLILVADYILT 254


>gi|288817534|ref|YP_003431881.1| ABC transporter permease protein [Hydrogenobacter thermophilus
           TK-6]
 gi|288786933|dbj|BAI68680.1| ABC transporter permease protein [Hydrogenobacter thermophilus
           TK-6]
 gi|308751137|gb|ADO44620.1| protein of unknown function DUF140 [Hydrogenobacter thermophilus
           TK-6]
          Length = 245

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 121/243 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  +  T       +     L   I Q+ Y+G   VPVV++ S  +G VIA 
Sbjct: 1   MLRVIEEVGRGVILTLMGIYFMFVNPPKLRHFISQLAYLGAETVPVVVITSIFSGGVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      +F AE     +++I   RE+G +L ++M+  R GSA+ A IG+M+I E+IDA+
Sbjct: 61  QTYSTFHRFNAEFLIGAVVAISMGRELGPVLASLMVVARVGSAMTASIGTMRITEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ V  L+SPR++A ++ +P+L ILA+ + + G   V  K + +   +F+ +    
Sbjct: 121 EVMGINPVSYLVSPRVFAGVLGVPMLVILADIAGVFGGWFVAVKLFGVNEYLFWEKMRDI 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A   +   GL KA F    I  V+   GF  G  +  +G+  T  VV S  +++I D   
Sbjct: 181 AEFYDFIGGLYKAVFFGLIISAVSCYFGFYTGGGTEGVGRATTNSVVVSSMLILISDYFL 240

Query: 365 AIF 367
              
Sbjct: 241 TAI 243


>gi|206890273|ref|YP_002248716.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742211|gb|ACI21268.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 256

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/248 (26%), Positives = 121/248 (48%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              S      LG +     +     +       + +RQ+ + G   + VVI     +G V
Sbjct: 9   GRYSIELFVFLGKMFIFLVDSIYYIFIPPFKFRNFLRQVRFFGNKSMIVVIFTGAFSGMV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A QG + L++FGAE     ++++  +RE+G +L A+M+ GR+GSA+ AEIG M+I E+I
Sbjct: 69  LALQGYYALNKFGAEALLGPVVALSLIRELGPVLCALMVTGRAGSAVTAEIGIMRITEQI 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  M ++ ++ ++ P I A I++ PLLT + +   I G  +V      +    +FS+ 
Sbjct: 129 DALTVMAVNPMKYVVVPNILAGIVAFPLLTAVFDVIGIYGGYLVSVHALGLSEGTYFSQM 188

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                + +I  GL K+      +  +    G+  G  +  + +  T  VV S  ++++ D
Sbjct: 189 ELYVDMEDIRIGLYKSLSFGLLVTWICTFMGYTSGYGARGVSRATTNAVVLSSVVILLWD 248

Query: 362 SLFAIFYF 369
            +   F  
Sbjct: 249 YMLGAFLL 256


>gi|255658873|ref|ZP_05404282.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella
           multacida DSM 20544]
 gi|260848821|gb|EEX68828.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella
           multacida DSM 20544]
          Length = 256

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 8/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   IG  +++   +  +   + G  +           + K  L  ++ QM ++GV 
Sbjct: 2   LLRILSTIGAFVLRRFEELGTIVLLYGETLRAL--------RHKPRLRHILAQMSHLGVD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V L    TG VI+ Q A  L +FGA+     +++I   RE+G +L AV+ AGR GS
Sbjct: 54  SLMIVSLTLLFTGVVISLQTADVLIRFGAQGTLGGIVTIAIGRELGPVLVAVVCAGRVGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEI +MK+ E+IDA+R M +  V  L+ PR+ A +I +P+LT+  +   + G  ++ 
Sbjct: 114 AITAEIATMKVTEQIDALRVMAVSPVDYLLVPRMLACMIVVPILTVFGDVIGVFGGWLIA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             Y  +    + +  H  A L ++  G+IKA F    I ++    G      +  +G+  
Sbjct: 174 VFYKGLTTYSYMNSIHIFADLFDMTGGVIKAIFFGNVIAVLGCYYGLHCPDGAEGVGRAT 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV SI ++ +++++     +
Sbjct: 234 TKTVVASIIVIFLLNAVLTFLLY 256


>gi|114776717|ref|ZP_01451760.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1]
 gi|114552803|gb|EAU55234.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1]
          Length = 266

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 120/250 (48%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +    +      +G          +  +         + Q+  +GV  + ++I+    TG
Sbjct: 17  RLGRHALRGIEQIGDATMLGLGALSLFFVRPWQGKHFVLQLSALGVGSLIIIIITGAFTG 76

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG + L++FG+E      + +  +RE+G +L A M+ GR+GS+I AEIG M++ E
Sbjct: 77  MVLALQGYYTLAKFGSESLLGAGVGMSIIRELGPVLGAFMVIGRAGSSITAEIGIMRVTE 136

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           + DA+  M ++  + ++ PRI A  I++PLL  + +   I    IV  +   +    + +
Sbjct: 137 QTDALEMMAINPKQRILLPRIVATTIAVPLLVSIFDVIGIGSGYIVGVELLGVNPGAYMA 196

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              ST T+ +I+ G +KA      IG++    G+     +  + +  T  VV S   V+I
Sbjct: 197 ELVSTVTMHDIYGGWVKAVVFGFMIGMICTYMGYRSEPTTEGVARATTQAVVVSSVTVLI 256

Query: 360 IDSLFAIFYF 369
           +D +   FY 
Sbjct: 257 LDYILTSFYL 266


>gi|187250741|ref|YP_001875223.1| ABC transporter-like protein [Elusimicrobium minutum Pei191]
 gi|186970901|gb|ACC97886.1| ABC transporter related [Elusimicrobium minutum Pei191]
          Length = 258

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 1/253 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
             +     +  G   +         +K        ++Q   +G++ + V  L S  TG V
Sbjct: 6   GREIIIFFNECGKAFNMLRSCMFWLFKAPFEWAQAMQQSVTIGINSLTVTTLTSIFTGMV 65

Query: 182 IAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +A QG   +S   +E +F   L+S   +RE+G +LTAV++ GR+G+A+ AEIG+M++ E+
Sbjct: 66  LALQGGNTISNILSEPMFVGTLVSFSLIRELGPVLTAVVVVGRAGAAVTAEIGTMQVTEQ 125

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T+G + VR L+ PR++A ++++P+LT+ ANFS I G  +V      +P   +   
Sbjct: 126 IDALYTLGTNPVRQLVLPRMFAFMLTVPILTLFANFSGIFGGYLVAVHGLGVPDVTYLED 185

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +     +   G IK+ F A  +G V   +G      +  +G+  T  VV S+ +++++
Sbjct: 186 ITNYMNTLDFMHGFIKSIFFAFMVGTVCCYKGLDTKGGAEGVGRSTTIAVVTSMVLILVL 245

Query: 361 DSLFAIFYFAIGI 373
           D        A GI
Sbjct: 246 DYFLTAILTAFGI 258


>gi|77918062|ref|YP_355877.1| toluene export protein [Pelobacter carbinolicus DSM 2380]
 gi|77544145|gb|ABA87707.1| ABC-type toluene export protein [Pelobacter carbinolicus DSM 2380]
          Length = 269

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 6/264 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   +G+   K   +        G +         S  +       ++RQ++++G     
Sbjct: 4   LVQAVGRFFQKLGAEFIFYLEQAGRMGIFLAACLFSVVRPPYKFGPILRQIHFIGSRSSF 63

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V++     TG V+A QG + L +FG+E      +++  +RE+G ++ A+M+ GR+GSAI 
Sbjct: 64  VILFTGSFTGMVLALQGYYTLRKFGSEGLLGAAVALSLIRELGPVIAALMVVGRAGSAIC 123

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G M+ +E+IDA+  M +D  + L++P+  A I+S+PLLT + + + I+G  +V    
Sbjct: 124 AEVGIMRNSEQIDALECMAIDPYKYLMAPKFVAGILSMPLLTAIFDMAGIVGGYLVGVAM 183

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLG 343
             +    +F + +S+    ++  GL+K+      I  +   +G+ +      G  +  + 
Sbjct: 184 LGVNKGAYFQQMYSSVVWNDVEMGLVKSLIFGLLIIWIGAAKGYYLHLERSGGFGAEGVS 243

Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367
           +  T  VV S   +++ D L +  
Sbjct: 244 RVTTDAVVLSSVAILVWDYLLSAI 267


>gi|253700132|ref|YP_003021321.1| hypothetical protein GM21_1507 [Geobacter sp. M21]
 gi|251774982|gb|ACT17563.1| protein of unknown function DUF140 [Geobacter sp. M21]
          Length = 258

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 9/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +GK+++ F         + G ++    E           + S++ QM  +G  
Sbjct: 1   MTQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREA-------PRNVQSILTQMAVIGWD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +PV  +++F  G V+A Q   +L ++G +     ++    +RE+G ++T+ ++AGR GS
Sbjct: 54  TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AE+G M + EEIDA++T+ +D VR L  PR  A I+ +P L I ++   IIG +++ 
Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173

Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                  + +A ++        +  I  GL K+      I +V+   GF+    +  +G+
Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIREIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S  ++++ D +      
Sbjct: 234 STTRSVVLSFMLILVADYILTRMLL 258


>gi|83952043|ref|ZP_00960775.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens
           ISM]
 gi|83837049|gb|EAP76346.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens
           ISM]
          Length = 261

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 117/260 (45%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              I + +             +G V    G   +   +   +       +  +G   +PV
Sbjct: 1   MSMIAQFLASIGATVLGFLATIGRVTIFAGNTVSHLIRPPFYGREFGAALIQIGWLSLPV 60

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V + +  TG  +A Q     ++F AE     +++I   RE+G +L  +M+A R  S+I A
Sbjct: 61  VGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAA 120

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG+MK+ E+IDA+ T+  + ++ L  PR+ A  +++P+L  + +   I+G  +V     
Sbjct: 121 EIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVGVGRL 180

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           D   A +        TL ++ +GLIK       + ++    G   G  +  +G+   + V
Sbjct: 181 DFGAATYLHNTLDFLTLWDVTSGLIKGAVFGFLVALMGCYFGMNSGRGAQGVGRATKSAV 240

Query: 351 VQSISIVIIIDSLFAIFYFA 370
           V +  +++  + L    +F+
Sbjct: 241 VAASVLILASNYLLTELFFS 260


>gi|220904015|ref|YP_002479327.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868314|gb|ACL48649.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 267

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 5/257 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +  +        LG       +  A  +  +      ++Q+Y +G     +++LI   
Sbjct: 11  LRRIGSPCLRAIDALGGTAIFFFDGLAQIFASRKIFPRTMQQLYIIGSKSFFLIMLIGVF 70

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L QFG+       +S+  +RE+G +LTA+M+ GR+GS++ AEIG M+I
Sbjct: 71  CGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSMTAEIGVMRI 130

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+  M ++ +  L+SPR+ A +I+ PLLT + +   IIG  +       I    +
Sbjct: 131 TDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDVIGIIGGYLTGVLMLGINEGAY 190

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352
           F R  S+ T+ ++  G IK+      +  +  ++G+            ++G   T+ VV 
Sbjct: 191 FYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPEAVGNATTSAVVI 250

Query: 353 SISIVIIIDSLFAIFYF 369
           S  +++  D +   F  
Sbjct: 251 SCVLILAADYVITSFLL 267


>gi|301060804|ref|ZP_07201619.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300445201|gb|EFK09151.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 258

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 4/257 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + K    + S    +G +          ++     +   ++Q+ ++G   + +++L   
Sbjct: 2   AVRKLGFSTLSYVRKMGAMGLFFLNTLFYTFVPPVKIYRCLKQIRFIGFQSLLLILLTGA 61

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            +G ++  QG + LS+FG++ F   ++ +  ++E+G ++ A+M+ GR+GSAI AEIG M+
Sbjct: 62  FSGMILGFQGFYSLSRFGSDAFLGPMVGLALIKELGPVIAALMVTGRAGSAITAEIGIMR 121

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+E+IDA+  MGL+  R L+ P + A +I LPLLT + +   I G  ++  +   +    
Sbjct: 122 ISEQIDALELMGLNPYRYLVVPNLLAAVICLPLLTAIFDVVGIFGGYLIGGELLGVGAGT 181

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF----AVGVHSNSLGKKVTTCVVQ 352
           +F        + ++  G+ K+      I  V   +GF      G  S  + K  T  VV 
Sbjct: 182 YFGEMAHYVEMKDVLEGIYKSFSFGVIIAWVCCFKGFYSGIYTGFGSEGVSKATTQAVVL 241

Query: 353 SISIVIIIDSLFAIFYF 369
           S  ++++ D       F
Sbjct: 242 SSVLILVWDYFMTSILF 258


>gi|294677110|ref|YP_003577725.1| ABC transporter permease [Rhodobacter capsulatus SB 1003]
 gi|294475930|gb|ADE85318.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003]
          Length = 259

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 119/254 (46%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +     G +   TG   +   +   +    ++ +  +G   +PVV + +F
Sbjct: 5   ALAGLGRTVLAALAGAGRISLFTGAVLSHMLRPPFYSREFLQALLQIGWLSLPVVGMTAF 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TGA +A Q     ++F AE     +++I  +RE+G +L  +M+A R  S+I AEIG+MK
Sbjct: 65  FTGAALALQIYAGGARFSAESVVPSIVAIGMVRELGPVLGGLMVAARVASSIAAEIGTMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+  + ++ L  PR+ A  +S+PLL  + +   ++G  ++  +      A 
Sbjct: 125 VTEQIDALVTLSTNPLKYLAVPRVLAATLSVPLLVAVGDVIGVLGGWLIGTERLGFNSAT 184

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +         L ++ +GL+K       + ++    G   G  +  +G+   + VV +   
Sbjct: 185 YIRNTWEYLELWDVGSGLVKGAAFGFLVALMGCYYGMNSGRGAQGVGRATKSAVVAASVA 244

Query: 357 VIIIDSLFAIFYFA 370
           ++  + L    +F+
Sbjct: 245 ILASNYLLTEVFFS 258


>gi|86158287|ref|YP_465072.1| ABC amino acid transporter, inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774798|gb|ABC81635.1| ABC amino acid transporter, inner membrane subunit
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 251

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 115/247 (46%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++         G +I   GE  A +++       ++ QM ++G     +V +     G 
Sbjct: 1   MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q  + L QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+
Sbjct: 61  VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +  ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F   
Sbjct: 121 IDAMETMAVSPIQYLVVPRVLASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   +IF GL KA      + ++    G++    +  +G+  T  VV S   +++ 
Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYSASGGARGVGEGTTRAVVASSVAILVA 240

Query: 361 DSLFAIF 367
           D    + 
Sbjct: 241 DYAGTVL 247


>gi|303327746|ref|ZP_07358186.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862107|gb|EFL85041.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 267

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 5/254 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                      +G +           +         ++Q+Y +G   + V++LI    G 
Sbjct: 14  LGRPCLRGIDAVGGMTLFMLAGLGQIFTSARIFPRSLQQIYVIGYKSLFVILLIGIFCGM 73

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG + L QFG+       +S+  +RE+G +LTA+M+ GR+GS++ AEIG M+I ++
Sbjct: 74  VLGLQGYYTLIQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSMAAEIGVMRITDQ 133

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  M ++ +  L+SPR+ A +IS PLLT + +   I+G  +       I    +F R
Sbjct: 134 IDALDVMDINSLGYLVSPRLVAALISFPLLTAIFDVIGILGGYLTGVLMLGINEGAYFYR 193

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSIS 355
             S+ T+ +I  G +KA      +  V   +G+            ++G   T+ VV S  
Sbjct: 194 IASSVTMTDISGGFVKALVFGLLVTTVCCHQGYYTHRRRDSVGPEAVGNATTSAVVISCV 253

Query: 356 IVIIIDSLFAIFYF 369
           +++  D +   F  
Sbjct: 254 LILAADYVLTSFLL 267


>gi|196232812|ref|ZP_03131662.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196223011|gb|EDY17531.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 245

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 + G ++  T         FK     +  QM  +GV  +P+  L SF  G  +A 
Sbjct: 1   MKDYLALNGQILYWTLLAPWRGQFFKI--GEVFHQMVLIGVRALPMASLTSFSIGLTLAM 58

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A QL + GA  F  DL+ +  LRE+G LL AV++ GRSGSA+ AE+G+M+++EEI+A+
Sbjct: 59  QAAGQLRKMGASQFVPDLVILSLLRELGPLLVAVVVIGRSGSAVTAELGTMRVSEEIEAL 118

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M ++ +R LI PR  A++I LP+LTI  ++  ++G   +     D   A +       
Sbjct: 119 EVMAINPIRFLIVPRFLAMMIMLPVLTIFGSYVGMVGGWSICHFALDYSTASYILHSFER 178

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A   ++++GLIK+   A  I  +A   G  V   +  +G+  T  VV S+ I++I ++  
Sbjct: 179 ARPWDLYSGLIKSVVFAWIIITIACHMGLRVEGGAEGVGQATTGSVVWSLLIMLIANATL 238

Query: 365 AIFYF 369
              +F
Sbjct: 239 TALFF 243


>gi|290968738|ref|ZP_06560276.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781391|gb|EFD93981.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 253

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 9/260 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG +++   +   +   + G  I                    I QM  +GV  +P
Sbjct: 3   VLECIGNRVLSLFSQVGAFTLLWGRTIRQL---------PNIKWHLTIYQMAKLGVDSLP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V L     G V+  Q    L ++GA+      MS+   RE+G +LT V++AGR G+A+ 
Sbjct: 54  IVSLTLLFAGMVMTLQIVDILLRYGAQSTLGGAMSVSMGRELGPILTGVVMAGRVGAAMT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+MK+ E+IDA+R + ++ +  L+ PR  A ++ +PLL          G   V    
Sbjct: 114 AEIGTMKVTEQIDALRCLAVNPIAYLVVPRFVACVLMVPLLAFYGYVIGTAGGYAVAVWG 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +    + +       + +I  GLIKA F    I ++A  EGF     +  +G+  T  
Sbjct: 174 AGLAHFTYVNSIAVLTAVGDIVYGLIKAMFFGGIIAVIACYEGFHAESGAEGVGRATTKS 233

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV SI  + I + + ++  +
Sbjct: 234 VVTSIVFIFICNYILSVILY 253


>gi|163784036|ref|ZP_02178993.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880693|gb|EDP74240.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 248

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/243 (27%), Positives = 117/243 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G +     E     +     +  +I+Q+  +G    P++I+  F TG V+  
Sbjct: 4   LTVLLEHIGSITLLFLETLKFVFIKPPKIKHIIKQIAVIGADAAPLIIITGFFTGGVLVV 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +      +F AE     L+S+   RE+  +L A+++  RSGSA+ A IG+M+I E+IDA+
Sbjct: 64  ETYPTFHKFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTMRITEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             + ++ VR LI+PRI A +  +P LTIL+  S I G   V  + Y +   +F  +    
Sbjct: 124 EVLAVNPVRYLIAPRIIASVFVVPSLTILSIASGIAGGYFVATELYSVNSFMFIEKMKDL 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I  G+ K+      + IV+   G+     +  +G+  TT VV S  +++I+D   
Sbjct: 184 TEFYDILGGIYKSIAFGVLLTIVSCYFGYVAKGGAEGVGRATTTAVVTSSVLILIVDYFL 243

Query: 365 AIF 367
              
Sbjct: 244 TAL 246


>gi|158521034|ref|YP_001528904.1| hypothetical protein Dole_1017 [Desulfococcus oleovorans Hxd3]
 gi|158509860|gb|ABW66827.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3]
          Length = 385

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 88/362 (24%), Positives = 160/362 (44%), Gaps = 2/362 (0%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                 +G         ++ D+   + +   +    +DL+ IT +D  G   +  F    
Sbjct: 21  GITIHVSGALTIDSHQSLSADLHKILERRQGACPIRLDLADITSVDDFGVLAVENFKSVA 80

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             K     V     Q   L          N  P  +   +   ++   +G  ++  I   
Sbjct: 81  IQKGCGVVVVQVTGQAQRLFQLFSGIADLNAVPPHASASHGLLDVIPEVGNTVIGGIKRV 140

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S    +G ++        S   F+      I  +   GV  +P++ LI  + G + A  
Sbjct: 141 DSSIAFVGSILFAFMRALFSPRSFRM--ADTIELIRRDGVDAIPIIGLIGIIIGLISAFV 198

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            + QL++ G +I+   +++   + EIG ++TA+++AGR+GSA  AEIG+MKI+EE+DA+ 
Sbjct: 199 SSVQLTKLGGDIYIPAMITFAMVAEIGPMMTAIVVAGRTGSAYAAEIGTMKISEEVDALI 258

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           +MG D    L  PRI AL++ LP+LT+ +   A++G  +V     ++    +        
Sbjct: 259 SMGFDPTLFLAIPRITALVVVLPILTVCSVIFALLGGLVVCVTLLNLQMGPYLEGVSDAL 318

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            + ++   L K+   A  I ++    GF V   + S+G   T+ VV  I  +I+ DS+ A
Sbjct: 319 FIDDVLWALAKSGIFALLIAVIGCLRGFQVRGGAASVGGAATSAVVTGIFFIILADSVVA 378

Query: 366 IF 367
           + 
Sbjct: 379 LI 380


>gi|146302050|ref|YP_001196641.1| hypothetical protein Fjoh_4314 [Flavobacterium johnsoniae UW101]
 gi|146156468|gb|ABQ07322.1| protein of unknown function DUF140 [Flavobacterium johnsoniae
           UW101]
          Length = 252

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 115/243 (47%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I    +    +G        F    +         ++Q Y +G   +P+V +  F+ G 
Sbjct: 1   MILSLKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGL 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  Q    L  FGAE +   ++++  +REI  ++TA++ AG+  S I AE+GSMK+ E+
Sbjct: 61  VLTIQSRPTLVTFGAESWLPGMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQ 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+    ++    L+  RI A  + +P+L I A+   IIG    I  + D+ F  + ++
Sbjct: 121 IDAMEVSAINPYNYLVVTRILACTLMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQ 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              +   +++    IK  F    IG++   +GF     + S+G    + VV +   + II
Sbjct: 181 IIQSLEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFII 240

Query: 361 DSL 363
           D +
Sbjct: 241 DMV 243


>gi|85858103|ref|YP_460305.1| organic solvents resistance ABC transporter permease [Syntrophus
           aciditrophicus SB]
 gi|85721194|gb|ABC76137.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Syntrophus aciditrophicus
           SB]
          Length = 284

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 13/291 (4%)

Query: 83  SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF 142
             ++     +  +++                +G+ ++ +IN+S       G         
Sbjct: 1   MTVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNS-------GAAAIFLLLA 53

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
               ++ +  L+ + +Q+YY+G     +++L+   TG V+  Q    L Q GAE     L
Sbjct: 54  ALKIFRPR-QLMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTL 112

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           +++  +RE+G +LTA+MI  R+GSAI A+IG  +I+E+IDA+ TM +D +R LISPRI A
Sbjct: 113 VALSLIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAA 172

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
            IIS P+LT L +   I+G+ I            FF R  S+  ++++  G IKA   A 
Sbjct: 173 AIISFPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAV 232

Query: 323 AIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +  V   +G+          + ++G   T+ VV S  ++++ D +     
Sbjct: 233 IVSTVCCYQGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLL 283


>gi|254442342|ref|ZP_05055818.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
 gi|198256650|gb|EDY80958.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
          Length = 260

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 5/255 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I K    S      LG +   + +   +  K +     L R ++ +GV  VP+ +++   
Sbjct: 2   ISKIGRQSIRLVSELGELAGFSAQASVALPKQRHIFEKLSRAIFEIGVRCVPITLIVGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  Q  + L++F +E      +++  + EIG + TA+MI G++GSA+ AEIG  + 
Sbjct: 62  TGLVLGLQLYYVLAKFSSESLLGQAVALSIILEIGPVFTAIMIVGQAGSALSAEIGIQRN 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ TM +D +  L+SPR+WA II+ P+LT   +   I G  +   +   +    +
Sbjct: 122 AEQIDALHTMQIDPIGFLVSPRLWAAIIAFPILTTFFDLIGIYGGYLTGVELLGVDPGAY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352
           ++R     +  NI+ GLIKA        ++   +G+          +  + +  T  VV 
Sbjct: 182 WNRIFEAVSPQNIYNGLIKALAFGIITTLICAFQGYFTHIKADIPGARGVSQTTTRAVVY 241

Query: 353 SISIVIIIDSLFAIF 367
           S   +++ D L   F
Sbjct: 242 SSIAILMFDYLITSF 256


>gi|167645542|ref|YP_001683205.1| hypothetical protein Caul_1577 [Caulobacter sp. K31]
 gi|167347972|gb|ABZ70707.1| protein of unknown function DUF140 [Caulobacter sp. K31]
          Length = 268

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 119/254 (46%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +     ++G V         S +    F    +RQ+  +G   +PVV L +
Sbjct: 13  RPLRTIGRSTLGALRMVGGVGVFALRGVVSVFTPPWFASQFLRQLVAIGFFSLPVVGLTA 72

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TGA +         +F AE     ++++   RE+G +L A+M+AGR  +AI AEIG+M
Sbjct: 73  IFTGAALGLNIYTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAM 132

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +  E+IDA+RT+  D  R L++PR+ A  + LPLLT++A+   + G  +V  +  D    
Sbjct: 133 RATEQIDAMRTLSTDPFRYLVAPRLLAATLVLPLLTLVADVIGVAGGWLVAVRILDFNST 192

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           V+     +     ++ +GLIKA      + ++    G+     +  +G+  T  VV S  
Sbjct: 193 VYIRNTANFIQGWDVGSGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAI 252

Query: 356 IVIIIDSLFAIFYF 369
           ++   D      + 
Sbjct: 253 LIFASDYFLTTLFT 266


>gi|220917185|ref|YP_002492489.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955039|gb|ACL65423.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 251

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 115/247 (46%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++         G +I   GE  A +++       ++ QM ++G     +V +     G 
Sbjct: 1   MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q  + L QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+
Sbjct: 61  VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +  ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F   
Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   +IF GL KA      + ++    G+A    +  +G+  T  VV S   +++ 
Sbjct: 181 TREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240

Query: 361 DSLFAIF 367
           D    + 
Sbjct: 241 DYAGTVL 247


>gi|57238787|ref|YP_179923.1| hypothetical protein Erum0570 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578712|ref|YP_196924.1| hypothetical protein ERWE_CDS_00480 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58616774|ref|YP_195973.1| hypothetical protein ERGA_CDS_00470 [Ehrlichia ruminantium str.
           Gardel]
 gi|57160866|emb|CAH57768.1| putative integral membrane protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58416386|emb|CAI27499.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
 gi|58417338|emb|CAI26542.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 265

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 112/250 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +      +G        F         +   + +Q   +    +P+V + +  TG
Sbjct: 16  SIGKYAIVLVFNIGDAFIFFIRFVYHCLCPPYYYCVIWKQFIEIFFFSLPIVGVTAIFTG 75

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+  Q A  ++   +  F   ++ +  +RE+G +L  ++IAGR G++I AEIG+M+I E
Sbjct: 76  AVLILQNALIINTNVSNDFIAGVVVVAIVRELGPVLIGLIIAGRVGASIAAEIGTMRITE 135

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+  +  + L+ PR+ A +IS+P+L + A+     G  IV          ++  
Sbjct: 136 QIDALFTLNTNPFKYLVVPRVIAAMISMPILILCADLIGSYGGYIVGSFQLGCTPEIYIR 195

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++  GLIKA      I  +    G+     +  +G   T  VV S  ++I 
Sbjct: 196 GVMKFLHTRDVVLGLIKATVFGFIISFMGCYNGYYCSGGARGVGIATTYVVVISSMLIIF 255

Query: 360 IDSLFAIFYF 369
           ++ +  +FY 
Sbjct: 256 LNYIVTVFYS 265


>gi|94264494|ref|ZP_01288281.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|94266598|ref|ZP_01290280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|93452769|gb|EAT03307.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
 gi|93455053|gb|EAT05280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1]
          Length = 263

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 6/259 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++ +    S      LG +           +K       ++RQ   +G + +PV+   + 
Sbjct: 5   RVERLGERSLYILGDLGRMGVFLLLAVGGLFKRPFRFAEVVRQTRLIGANSLPVIFFTAA 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+  QG + L QFGAE      +++  +RE+G +LTA+M+ GR+GSA+ AEIG M+
Sbjct: 65  FTGMVLGLQGYYTLRQFGAESALGSAVALSLIRELGPVLTALMVIGRAGSAMCAEIGIMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            +E+IDA+  M +D  R LI+P++ A +IS+PLLT++ N   I G  +       +    
Sbjct: 125 NSEQIDALECMAVDPFRYLIAPKLLATMISIPLLTLIFNVVGIFGGYVAGVMLLGVNPGS 184

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV------HSNSLGKKVTTCV 350
           +F+    +   A+I  G+IK+   A  +  +    G+ V         +  + +  T  V
Sbjct: 185 YFAGMEQSVVDADIRMGIIKSLVFALLVVWICTARGYYVHAIRGAGFGAEGVSRATTQAV 244

Query: 351 VQSISIVIIIDSLFAIFYF 369
           V S   V++ D L      
Sbjct: 245 VFSSISVLLFDYLLTAVLL 263


>gi|218885955|ref|YP_002435276.1| hypothetical protein DvMF_0852 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756909|gb|ACL07808.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 267

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 5/257 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      +      +G +     +     +     +  ++ Q++ +G   + V++LI   
Sbjct: 11  VTALGAATLRLLGEMGAMFLFLADGLRLIFASPKQIPKILNQVFVIGSKSLFVILLIGVF 70

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+GS++ AEIG M+I
Sbjct: 71  TGMVLGLQGYYTLVKFGSEGLLGAAVALSLIRELGPVLTAIMVTGRAGSSMAAEIGVMRI 130

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+  M ++ +  L++PRI A +IS PLLT + +   I+G  +       I   V+
Sbjct: 131 TDQIDALDVMDINPMAYLVAPRIAASLISFPLLTAIFDVVGILGGYVTGVTLLGINEGVY 190

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352
           F R  ++  +A+I  G +K+   A  +  V+  +G+   +         +    T+ VV 
Sbjct: 191 FYRIQTSVEMADITGGFMKSVLFAVIVATVSCYQGYFTHMRRDGVGPEGVSNSTTSAVVL 250

Query: 353 SISIVIIIDSLFAIFYF 369
           S   V++ D +   F  
Sbjct: 251 SCVFVLVADYVLTSFLL 267


>gi|197122403|ref|YP_002134354.1| hypothetical protein AnaeK_1997 [Anaeromyxobacter sp. K]
 gi|196172252|gb|ACG73225.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K]
          Length = 251

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 115/247 (46%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++         G +I   GE  A +++       ++ QM ++G     +V +     G 
Sbjct: 1   MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q  + L QF AE ++    +    RE+  + TA+M+ GR+GSAI  E+G+M++ E+
Sbjct: 61  VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +  ++ L+ PR+ A I+  P+LT+L N     GA ++      IP   F   
Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   +IF GL KA      + ++    G+A    +  +G+  T  VV S   +++ 
Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240

Query: 361 DSLFAIF 367
           D    + 
Sbjct: 241 DYAGTVL 247


>gi|152985726|ref|YP_001350363.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150960884|gb|ABR82909.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 265

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F          LG      G            L  L++Q+Y VGV  + ++++  
Sbjct: 8   ERVRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGAGLHLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++T ++ AGR+GSA+ AEIG+M
Sbjct: 68  LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +   I G ++V   +  +   
Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|171058394|ref|YP_001790743.1| hypothetical protein Lcho_1711 [Leptothrix cholodnii SP-6]
 gi|170775839|gb|ACB33978.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6]
          Length = 369

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 79/370 (21%), Positives = 150/370 (40%), Gaps = 14/370 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +         G+W         D           +    VD  A+   D   A  +   +
Sbjct: 13  DGAGWTLILRGDW-------CGDAGTRLTPPPAAARQVSVDARALGAWDGGLAAALHQCL 65

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
              H +     +      + S++         +   + +            IG ++    
Sbjct: 66  APLHQRAVPLQLQDLPPGVRSVLELALSVVRVSAPERAAAPVG-----VAAIGHRLAISW 120

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            +  + A   G V+   G         +G    L RQ+   G   VP+V L  F+ G ++
Sbjct: 121 VECMATAAFFGEVLIALGRLLRGRSDLQGV--DLWRQVDQAGPLSVPIVSLTCFLVGLML 178

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  G  QL + GA  F  D++++  +RE+  L+T V++AGR G+A  A+IGSM+  EEID
Sbjct: 179 AYMGGAQLHRIGAPSFIPDVVTVGMVRELAGLMTGVILAGRLGAAFAAQIGSMQAGEEID 238

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +G+D +  L+ PR+ AL++  P+L  +     ++         Y +    +  +  
Sbjct: 239 ALRALGVDPIGYLVLPRLLALLLVAPMLVAIGMLVGVLAGLPAAVAAYGLSPTEYLHKSA 298

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +  T  +++ GL K       + +   +EG   G  + ++G   TT VV+++  ++    
Sbjct: 299 AALTWTHLWIGLFKGMMYLGLVALAGCREGLRAGRDAQAVGAATTTAVVKALVWIVAAAC 358

Query: 363 LFAIFYFAIG 372
              +   ++G
Sbjct: 359 GSTVVLQSLG 368


>gi|15599651|ref|NP_253145.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107099960|ref|ZP_01363878.1| hypothetical protein PaerPA_01000981 [Pseudomonas aeruginosa PACS2]
 gi|116052487|ref|YP_792800.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893546|ref|YP_002442415.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238883|ref|ZP_04932206.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719]
 gi|254244732|ref|ZP_04938054.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192]
 gi|296391165|ref|ZP_06880640.1| putative ABC transport system permease protein [Pseudomonas
           aeruginosa PAb1]
 gi|313107040|ref|ZP_07793243.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|9950690|gb|AAG07843.1|AE004859_12 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115587708|gb|ABJ13723.1| putative toluene tolerance ABC efflux transporter [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170814|gb|EAZ56325.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719]
 gi|126198110|gb|EAZ62173.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192]
 gi|218773774|emb|CAW29588.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310879745|gb|EFQ38339.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 265

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F          LG      G            L  L++Q+Y VGV  + ++++  
Sbjct: 8   ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++T ++ AGR+GSA+ AEIG+M
Sbjct: 68  LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +   I G ++V   +  +   
Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|224373004|ref|YP_002607376.1| abc transporter, permease protein [Nautilia profundicola AmH]
 gi|223589585|gb|ACM93321.1| abc transporter, permease protein [Nautilia profundicola AmH]
          Length = 259

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 108/248 (43%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +      LG       +      K    +  +  Q+ ++G   + V+ L SF TG V
Sbjct: 10  GKSAIDFIEGLGKFTIFQLKLLPLFLKPPFRIRQIFEQINFMGFGSLGVIFLTSFFTGLV 69

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
            A Q      +FG E F    + I   +E+G +  A+M+  R  SA  AE+GSM++ E+I
Sbjct: 70  EAVQLYNGFHKFGVEDFMGYTIFISICKELGPVFAALMVVSRGISAYAAELGSMRVTEQI 129

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  M +D  + LI PRI   IISLPLL +  +  A IGA ++     D+    +    
Sbjct: 130 DALDVMAVDSKQYLIVPRIIGTIISLPLLILFFDAVANIGAYLISVYTLDVNGYTYIENI 189

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +   G++K       I  V    G+     +  +G   T  VV S  ++ + D
Sbjct: 190 KQFGELGDFTEGIVKGIVFGYLISAVGTYIGYNTRGGAKGVGVSTTKAVVISSILIFVAD 249

Query: 362 SLFAIFYF 369
            + + FY 
Sbjct: 250 YIVSAFYL 257


>gi|49082890|gb|AAT50845.1| PA4455 [synthetic construct]
          Length = 266

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F          LG      G            L  L++Q+Y VGV  + ++++  
Sbjct: 8   ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++T ++ AGR+GSA+ AEIG+M
Sbjct: 68  LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL  + +   I G ++V   +  +   
Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|329121164|ref|ZP_08249793.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Dialister micraerophilus
           DSM 19965]
 gi|327470327|gb|EGF15786.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Dialister micraerophilus
           DSM 19965]
          Length = 253

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 2/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      S      +G  I    E      K K  L    +Q   +GV+  P+V L    
Sbjct: 4   LENIGKYSLKVIAQIGATILLLIETLKKINKIK--LYETCKQCLLLGVNSFPIVFLTLLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V + Q   +L ++GAE  +  +++I   RE+G +L  V++AGR G+AI AE+G+M++
Sbjct: 62  TGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAITAELGTMRV 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R M +D V  L+ PR+ A +I LP+L + A    + G  IV     +I   ++
Sbjct: 122 TEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTIGVGGGMIVASVTGNISSHMY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +    S    ++++ G+IK  F    I +     G      +  +GK  T  VV S+ ++
Sbjct: 182 WDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGITCETGAEGVGKATTQSVVYSMIMI 241

Query: 358 IIIDSLFAIFYF 369
            I++ + +   F
Sbjct: 242 FIVNYILSTILF 253


>gi|294056022|ref|YP_003549680.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615355|gb|ADE55510.1| protein of unknown function DUF140 [Coraliomargarita akajimensis
           DSM 45221]
          Length = 258

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 5/256 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I K    + +  H  G +   +G   +   + +     L+  ++ +GV  VP+V+++   
Sbjct: 2   IRKLGQSALATVHEFGEMTVFSGMALSGFIQQRRRSQKLLSAIFEIGVRCVPIVLVVGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  Q  + L + GAE    D + +  +RE+G +LTA+M+ G++GSA+ +E+G  + 
Sbjct: 62  AGLVMGLQLYYTLVRLGAEAALGDAIGLSLVRELGPVLTALMVVGQAGSALASELGIQRN 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E+IDA++TMG++    L+ PR+WA +I  P+LT L +   I G  +       +   V+
Sbjct: 122 DEQIDALQTMGIEPRGYLVGPRLWAALICFPMLTALFDLIGIYGGYLTGSVLLHVDSGVY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352
           ++  + +    +++ G IKA         +    G+             + +  T  VV 
Sbjct: 182 WTHVYKSVQWDDVWGGFIKALVFGLLTISICSYRGYYTHLKSSFRGVRGVSQSATRAVVY 241

Query: 353 SISIVIIIDSLFAIFY 368
           S   V+  D L   F 
Sbjct: 242 SSVAVLAADYLITSFL 257


>gi|224369296|ref|YP_002603460.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Desulfobacterium autotrophicum HRM2]
 gi|223692013|gb|ACN15296.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Desulfobacterium autotrophicum HRM2]
          Length = 269

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 125/259 (48%), Gaps = 6/259 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++    +++      +G       +           L  +I  ++++G+  + V+IL   
Sbjct: 11  RVGALGSNTLDFVQGIGRAWLFLSQGLFQLLIPPFQLSKIIEHIWFIGMKSMMVIILTGI 70

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+  QG + L +FG+E      +++  +RE+G +LTA+M+  R+GSA+ AE+G M+
Sbjct: 71  FTGMVLGLQGYYTLVRFGSEGMLGSAVALTLIRELGPVLTAIMVTARAGSAMAAELGVMR 130

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+++IDA+ TM ++ VR L +PRI A +IS PLLT L +   I G  +       I   +
Sbjct: 131 ISQQIDALDTMDINPVRYLFTPRIIAAVISFPLLTALFDVIGIFGGYLTGSLMLGINSGI 190

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCV 350
           +  R   +  + ++  G +K+   +  +  V    G+        G  +  +    TT V
Sbjct: 191 YLFRVEESVLMTDVTGGFVKSLVFSLVVTTVCCSRGYFTHLHRGGGFGAKGVSFSTTTAV 250

Query: 351 VQSISIVIIIDSLFAIFYF 369
           V S  +V++ D +      
Sbjct: 251 VNSCVLVLVCDYVITYLLL 269


>gi|313891881|ref|ZP_07825486.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
 gi|313119875|gb|EFR43062.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
          Length = 253

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 2/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      S      +G+ I    E      K K  L    +Q   +GV+  P+V L    
Sbjct: 4   LENIGKYSLKVIAQIGVTILLLIETLKKINKIK--LYETCKQCLLLGVNSFPIVFLTLLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V + Q   +L ++GAE  +  +++I   RE+G +L  V++AGR G+AI AE+G+M++
Sbjct: 62  TGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAITAELGTMRV 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R M +D V  L+ PR+ A +I LP+L + A  + + G  IV     +I   ++
Sbjct: 122 TEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTTGVGGGMIVASVTGNISSHMY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +    S    ++++ G+IK  F    I +     G      +  +GK  T  VV S+ ++
Sbjct: 182 WDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGLTCETGAEGVGKATTQSVVYSMIMI 241

Query: 358 IIIDSLFAIFYF 369
            I++ + +   F
Sbjct: 242 FIVNYILSTILF 253


>gi|124516678|gb|EAY58186.1| putative integral membrane protein [Leptospirillum rubarum]
          Length = 255

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 127/249 (51%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                     I G ++  T       ++      + + Q+  VG    PVV++ +  TG 
Sbjct: 7   VGRKCIGLFSISGDLLITTVTALTGMFRPAFLWWNFLVQLVKVGADSTPVVLVTALFTGM 66

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q      +F AE     ++S+   RE+G ++T +M++GRSGS++ AE+G+M++ E+
Sbjct: 67  VLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQ 126

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ ++ +  +  L++PR +A +I+LPLLT++A+F  I+G   V      +P  V+   
Sbjct: 127 IDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKG 186

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L + ++GL+KA      + I +   G+     +  +G+ VT  VV S   ++++
Sbjct: 187 IARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVL 246

Query: 361 DSLFAIFYF 369
           D     + F
Sbjct: 247 DYFLTAWLF 255


>gi|325109134|ref|YP_004270202.1| hypothetical protein Plabr_2580 [Planctomyces brasiliensis DSM
           5305]
 gi|324969402|gb|ADY60180.1| protein of unknown function DUF140 [Planctomyces brasiliensis DSM
           5305]
          Length = 271

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 118/253 (46%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                 +     G                      L   +Y +GV  +PVV++     G 
Sbjct: 15  LGELIVAPIAAAGDFALFAWATIRWLAIKWPRSSVLWPNLYQIGVLSLPVVMVTGGFIGM 74

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q   QL     E     ++++  ++E+G +L A M+AGR GSAI AE+G+M++ E+
Sbjct: 75  VLAIQTYDQLRLMHMESHLGSVINLALVKELGPVLAATMLAGRVGSAIAAELGTMRVTEQ 134

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  +G D V+ L+ PR    ++ +PLLTI+A+   ++   +       I    ++  
Sbjct: 135 IDALEALGADPVQYLVVPRFLGCVLLIPLLTIVADTVGMLCGWLFSTSVLGINSYFYWHH 194

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            ++  TL ++++G++K+ F   AI +V+   GF     +  +G   T   V S   ++ +
Sbjct: 195 TYAYITLFDVYSGIMKSVFFGAAIALVSCHRGFQAKAGAEGVGTAATQTFVYSFVCILFL 254

Query: 361 DSLFAIFYFAIGI 373
           D L  +    + I
Sbjct: 255 DFLAGMLLSQVYI 267


>gi|91203173|emb|CAJ72812.1| similar to ABC-type transport system permease protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 258

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 69/249 (27%), Positives = 126/249 (50%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +        +G V     +     +        L++++   G     +V +I+  TG V+
Sbjct: 9   HTVKKFLLSMGQVTLLAFKGFWGIFLPPFNPKLLLKEIDNFGAGSFLLVNIIALFTGMVM 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q  + L  +GAE++   ++S+  +RE+G +LT++M+  R GS I AEIGSM++ E+ID
Sbjct: 69  SLQTIYGLRMYGAEMYVGSVVSLSIVRELGPVLTSIMVGARIGSGIAAEIGSMQVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +G   ++ L+SP+I+A +I+LPLLT+ A+F  I G  I+     DI    + +   
Sbjct: 129 AMRALGASPIKKLVSPKIFAGLITLPLLTVTADFIGIFGGLIIATFELDIDHIFYINSIL 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +T T+++  +G+ K  F    I ++    G      +  +G+  T  VV     ++I D 
Sbjct: 189 TTITISDFISGIGKTVFFGLLIAVIGCYFGLKTSGGTTGVGRSTTISVVTISISILIADF 248

Query: 363 LFAIFYFAI 371
                +  I
Sbjct: 249 FLTKLFLMI 257


>gi|78222008|ref|YP_383755.1| hypothetical protein Gmet_0788 [Geobacter metallireducens GS-15]
 gi|78193263|gb|ABB31030.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 257

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 127/259 (49%), Gaps = 7/259 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            +     +G   +    +       L + + N        +        + +Q++++G  
Sbjct: 2   LRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFH-------IFKQIHFIGTK 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+ L +  TG V+  QG + L++FG+E      +++  +RE+G +LTA+M+ GR+GS
Sbjct: 55  SLFVITLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVVGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG MKI E+IDA++TM L+  + LISP+I   ++++PLL  + +   I G  +V 
Sbjct: 115 AITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVVGIYGGYLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
            K   +    +F     +    ++++G +K+      +  V   +G+     +  + +  
Sbjct: 175 VKLLGVNPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRAT 234

Query: 347 TTCVVQSISIVIIIDSLFA 365
           T  VV S  +V++ D    
Sbjct: 235 TEAVVMSSVLVLVWDYFLT 253


>gi|126740431|ref|ZP_01756119.1| membrane protein [Roseobacter sp. SK209-2-6]
 gi|126718567|gb|EBA15281.1| membrane protein [Roseobacter sp. SK209-2-6]
          Length = 260

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 115/254 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    +      +G V           ++   +   ++  +  VG   +PVV L +  
Sbjct: 7   LARLGRMALGALAAIGRVTLFALSTFTHMFRPPYYPREVLLSLLQVGWLSLPVVGLTAVF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L++PR+ A ++++P+L  + +   I G   V     D   A +
Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALVTVPVLVGVGDIIGIAGGYTVAVYNLDFNSAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ + L+K  F       +    G   G  +  +G+   + V  +  ++
Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGTIAATMGCYYGMQSGRGAQGVGRATKSSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LAANFILTGVFFSL 260


>gi|326800463|ref|YP_004318282.1| hypothetical protein Sph21_3067 [Sphingobacterium sp. 21]
 gi|326551227|gb|ADZ79612.1| protein of unknown function DUF140 [Sphingobacterium sp. 21]
          Length = 254

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 75/243 (30%), Positives = 121/243 (49%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG V      F             +I Q Y VGV  +P++ L  F+TG V   Q   
Sbjct: 10  LIQLGNVHHFIMRFFKELVMPPYEFKEIINQCYEVGVKSLPLISLTGFITGIVFTNQSRP 69

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGA      L++I  +R +  L+TA++ AG+ GS I AE+GSMK+ E+IDA+   G
Sbjct: 70  SLEDFGATAMLPSLIAIAIVRALAPLVTALIAAGKVGSNIGAELGSMKVTEQIDAMEVSG 129

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            +  + L+  R+ A  I +P+L+    F  ++G+ + ++++  + F  FF +   T T  
Sbjct: 130 TNPFKFLVVSRVLATTIMIPILSCYTGFVGLMGSFLNVYQHESVSFISFFDQVFETVTFL 189

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +IF  +IKA F    IGIV   +G+     +  +GK     VV S+ ++ I + L  +  
Sbjct: 190 DIFQAIIKAAFFGFTIGIVGCYQGYNSSKGTEGVGKAANAAVVASMFLIFIEEQLVVMIV 249

Query: 369 FAI 371
            +I
Sbjct: 250 QSI 252


>gi|172039649|ref|YP_001806150.1| hypothetical protein cce_4736 [Cyanothece sp. ATCC 51142]
 gi|171701103|gb|ACB54084.1| DUF140-containing protein [Cyanothece sp. ATCC 51142]
          Length = 263

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L   +   G+      K K    + + QM  VG   V + ++ +   G V 
Sbjct: 9   RGLGIWFERLVAAVLLGGQVFFHLLKTKIHRRNTLEQMSVVGPESVTIALITAGFVGMVF 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+ID
Sbjct: 69  TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +  D +  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   
Sbjct: 129 ALYMLKTDPIDYLVVPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSVR 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L ++ T +IK+      I ++    G      +  +G+  TT VV S+  V +I+ 
Sbjct: 189 NFLELWDLVTSMIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248

Query: 363 LFA-IFYFAIG 372
             + + +   G
Sbjct: 249 FLSWVMFQGTG 259


>gi|126657935|ref|ZP_01729088.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110]
 gi|126620875|gb|EAZ91591.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110]
          Length = 263

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L   I   G+      K K    + + QM  VG   + + ++ +   G V 
Sbjct: 9   RGLGIWFERLVAAILLGGQVFFHLLKTKIHRRNTLEQMSVVGPESLTIALITAGFVGMVF 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+ID
Sbjct: 69  TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +  D +  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   
Sbjct: 129 ALYMLKTDPIDYLVLPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSIR 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L ++ T +IK+      I ++    G      +  +G+  TT VV S+  V +I+ 
Sbjct: 189 NFLELWDLVTSVIKSIAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248

Query: 363 LFA-IFYFAIG 372
             + + +   G
Sbjct: 249 FLSWVMFQGTG 259


>gi|104780316|ref|YP_606814.1| toluene tolerance ABC efflux transporter permease [Pseudomonas
           entomophila L48]
 gi|95109303|emb|CAK14000.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           entomophila L48]
          Length = 265

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 136/256 (53%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F   +     +LG      G   +      G    L++Q+Y VGV  + ++++  
Sbjct: 8   ERIRLFGRSAIDVLAVLGRSCLFLGHALSGRGGIGGGFQLLVKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+    ++ + + ++  GLIK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWGNMQNSVSFSDDVINGLIKSLVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|303230190|ref|ZP_07316958.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515116|gb|EFL57090.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 253

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+ ++  +++  +   +L   I       A           +++QM ++GV  +
Sbjct: 2   NWLETIGRNVMAGLSNVGTAMLLLWQTIKQLKMLNAWH---------VLQQMAHLGVDSL 52

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P++ L     G V+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+AI
Sbjct: 53  PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+MK+ E+IDA+R M ++ +  L+ PR+ A +I +P+L        I G   V   
Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATT 172

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +  A +       +T+++   GLIK+      I +V   +G    + + ++G   T+
Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV SI +V +++   +   F
Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253


>gi|24375440|ref|NP_719483.1| hypothetical protein SO_3953 [Shewanella oneidensis MR-1]
 gi|24350284|gb|AAN56927.1|AE015826_12 conserved hypothetical protein TIGR00056 [Shewanella oneidensis
           MR-1]
          Length = 261

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   NIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|148263316|ref|YP_001230022.1| hypothetical protein Gura_1245 [Geobacter uraniireducens Rf4]
 gi|146396816|gb|ABQ25449.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 257

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   S    +    + +     S      +      Q+  +GV  + +VIL    TG V+
Sbjct: 8   NTLKSFLLEVQEFFTLSLRAVRSIVSPPYYYRDFTTQLDKIGVGSLFIVILTGLFTGMVM 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   ++++  ++E+G +L+A+M+ GR GSAI AEIG+M + E+ID
Sbjct: 68  ALQALIQLKPFAATSYVGGMVAVTMIKELGPVLSALMVTGRVGSAITAEIGTMVVTEQID 127

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D V+ L++ R+ A+++++PLLTI+ +  +++G  I+    YD+   +++    
Sbjct: 128 AMRVEGTDIVKRLVTSRLKAILVAMPLLTIITDAISLLGGYIMS-ASYDMNPIMYWKSIP 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  G+ K  F    I ++    GF     +  +G      VV S  I+++ D 
Sbjct: 187 QFMVFQDLIEGVAKPAFFGFVIAMIGCHVGFNTRGGAEGVGASAKRAVVISSVIILVSDF 246

Query: 363 LFAIFY 368
                +
Sbjct: 247 FLTKIF 252


>gi|317485263|ref|ZP_07944144.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6]
 gi|316923554|gb|EFV44759.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6]
          Length = 265

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 5/246 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG       E     +      + +++Q+Y +G   + V+ LI+  TG V+  
Sbjct: 15  FLRWIDALGDTFLFLLEGLRQIFIAPKLFIKVLQQLYVIGTKSLFVICLIALFTGMVLGL 74

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG + L +FG+  F    +S+  +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+
Sbjct: 75  QGYYVLVKFGSVGFLGAAVSLTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDAL 134

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +  +  L++PR  A +I+ PLLT + +   IIG  +       +    +F    S+
Sbjct: 135 EVMDIPGMGYLVAPRFVASLIAFPLLTAIFDVVGIIGGYLTGVLLLGVNEGAYFHGIESS 194

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSISIVII 359
             + ++  G IK+   A  I ++   +G+            ++    T+ VV S   V++
Sbjct: 195 VLMPDVTEGFIKSFVFALLIALICCYQGYNAHRRRDGMGPEAVANATTSAVVISCVFVLV 254

Query: 360 IDSLFA 365
            D +  
Sbjct: 255 ADYVVT 260


>gi|218248789|ref|YP_002374160.1| hypothetical protein PCC8801_4068 [Cyanothece sp. PCC 8801]
 gi|257061848|ref|YP_003139736.1| hypothetical protein Cyan8802_4107 [Cyanothece sp. PCC 8802]
 gi|218169267|gb|ACK68004.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8801]
 gi|256592014|gb|ACV02901.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8802]
          Length = 263

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 113/237 (47%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+      K      + + QM  VG   + + ++ +   G V   Q A +   F
Sbjct: 20  AAMLLGGQVFFHLLKTPIHRRNTLEQMSVVGPESLTIALVTAGFVGMVFTIQVAREFIHF 79

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA      +++I   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D + 
Sbjct: 80  GAASTVGGVLAIALTRELSPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYVLKTDPID 139

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + LP+L ILA  + + G  ++    YDI   +F     +   L +I T 
Sbjct: 140 YLVVPRVLACCMMLPVLNILALMTGMAGGLLIADSLYDISPDLFLKSARNFLELWDIVTS 199

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           LIK+      I ++    G      +  +G+  TT VV S+  V I +   + F F 
Sbjct: 200 LIKSAVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFIANFFLSWFMFQ 256


>gi|313896753|ref|ZP_07830301.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320530066|ref|ZP_08031136.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399]
 gi|312974670|gb|EFR40137.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320137499|gb|EFW29411.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399]
          Length = 255

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 1/254 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    +G V    GE      + +  + S++ QM ++G   + +V L  
Sbjct: 3   RILEAVGAFVLTHLANIGRVTLLYGETMRQVTR-RLRVRSIVYQMSHLGADSLLIVGLTL 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +M
Sbjct: 62  LFTGVVLTLQTAHEFIRYGAQSTIGAVIAISIGRELGPVLVGVVCAGRVGAAITAEVSTM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+R M +  V  LI PR+ A +  +P+LT+  +   + G  +    Y  I   
Sbjct: 122 KVTEQIDALRVMAVSPVNYLIVPRMLACMCVVPILTVFGDVIGVFGGYLTAVHYSGISAY 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F       AT+ ++  GLIKA F    I ++    G A    +  +GK     VV SI 
Sbjct: 182 TFTHSITQFATIYDLTGGLIKAIFFGNVIAVLGCHYGLAAPNGAEGVGKATMQTVVTSII 241

Query: 356 IVIIIDSLFAIFYF 369
           ++ I++++   F F
Sbjct: 242 VIFILNAVLTFFLF 255


>gi|120600243|ref|YP_964817.1| hypothetical protein Sputw3181_3451 [Shewanella sp. W3-18-1]
 gi|146291827|ref|YP_001182251.1| hypothetical protein Sputcn32_0722 [Shewanella putrefaciens CN-32]
 gi|120560336|gb|ABM26263.1| protein of unknown function DUF140 [Shewanella sp. W3-18-1]
 gi|145563517|gb|ABP74452.1| protein of unknown function DUF140 [Shewanella putrefaciens CN-32]
 gi|319425062|gb|ADV53136.1| ABC phospholipid transporter, inner membrane subunit, MlaE
           [Shewanella putrefaciens 200]
          Length = 261

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWQKDILNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|302828760|ref|XP_002945947.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f.
           nagariensis]
 gi|300268762|gb|EFJ52942.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f.
           nagariensis]
          Length = 348

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 116/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+     +K      + + Q+  VG + + V +L +   G V   Q   + ++ 
Sbjct: 102 ACLVLGGQVVLRIFKGNIHWRNTVEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKL 161

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TA+++AGR GSA  AE+G+M+++E++D++R +  D V 
Sbjct: 162 GLTRSVGGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLFTDPVD 221

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PR+ A +I+ P+L +L     +  A ++    Y++P  V         T  ++ T 
Sbjct: 222 YLVTPRVLASMIAGPILNVLCFCMGMGAAVLLADLVYNVPANVIVDSARRALTSYDVLTS 281

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           ++K+      +  ++   GF     +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 282 MVKSWVFGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSFIFFQ 338


>gi|78222485|ref|YP_384232.1| hypothetical protein Gmet_1271 [Geobacter metallireducens GS-15]
 gi|78193740|gb|ABB31507.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 255

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 131/252 (51%), Gaps = 2/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +      +   I+G ++    +      +    +LS+  QM  +G   +P+  +++F  G
Sbjct: 4   RVGKRVIAFNEIVGEMVMLLCQTVWFFREAPRNILSIFTQMSIIGYETLPMASVMAFFVG 63

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q   +L ++G +     ++ +  +RE+G ++T+ ++AGR+GSA+ AEIG MK+ E
Sbjct: 64  MVLALQTGAELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMAAEIGVMKVYE 123

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY--YDIPFAVF 297
           EIDA++T+ ++ VR L  PR+ A +I +P L I A+F  I+G +++   +    I ++ +
Sbjct: 124 EIDALKTLDINPVRYLAMPRLIACLICVPALVIYADFVGILGGALLSHLHPKIFISYSTY 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +   ++   L  I  GL+KA    C IG+V+   GF     +  + +  T  VV S  ++
Sbjct: 184 YDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTTRAVVLSFMLI 243

Query: 358 IIIDSLFAIFYF 369
           +  D        
Sbjct: 244 LAADYFLTRLLL 255


>gi|308272145|emb|CBX28752.1| UPF0393 membrane protein RBE_1340 [uncultured Desulfobacterium sp.]
          Length = 288

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +             +G +     +     + F   +  +++Q++++G   V V+ L    
Sbjct: 32  VTALGKWIIFVIQEMGRIAIFFSKSFYLMFSFPFQIKKILQQIHFIGSKSVFVICLTGAF 91

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG   L +FG+  F   ++++  +RE+G +L A+M+ GR+GSAI AE+G M+I
Sbjct: 92  TGMVLGLQGYHTLVKFGSAGFLGAVVALSLIRELGPVLAAIMVTGRAGSAIAAEVGIMRI 151

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +EEIDA+ TM ++ +R L+SP++ A +IS+PLLT L +   IIG  I       I   ++
Sbjct: 152 SEEIDALDTMDINPLRFLVSPKLAAALISMPLLTALFDVVGIIGGYISGSLLLGISGGIY 211

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQ 352
           FSR  ++  +A++  G IK+   A  I  V   +G+       G  +  +    T+ VV 
Sbjct: 212 FSRIETSVEMADVTGGFIKSLVFAAVIVTVCCFQGYYTHTRKEGFGAKGVSLSTTSAVVI 271

Query: 353 SISIVIIIDSLFAIFYF 369
           S   ++I D +      
Sbjct: 272 SCVTILITDYVLTSLLL 288


>gi|320354123|ref|YP_004195462.1| hypothetical protein Despr_2023 [Desulfobulbus propionicus DSM
           2032]
 gi|320122625|gb|ADW18171.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM
           2032]
          Length = 272

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 6/260 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I +  + +      LG +            K       LI+Q+ ++G   + V+   +
Sbjct: 13  RLIGRMGDQAIYTLTDLGRMGIFLFFSLLGLLKRPFRFRELIKQVGFIGAGSLTVIFFTA 72

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  QG + L +FGAE      +S+  + E+G +LTA+M+AGR+GSA+ AEIG M
Sbjct: 73  LSTGMVLGLQGYYSLHKFGAEGMLGSAVSLSLIMELGPVLTALMVAGRAGSAMCAEIGIM 132

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I+E+IDA+  M +D  R  ISP++ A +IS+PLLT   +   I G  +   K   +   
Sbjct: 133 RISEQIDALECMAIDPFRYFISPKLLATLISVPLLTAFFDVIGITGGYLAGVKLMGVNSG 192

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTC 349
            FFS    + T  ++  G+IK+   A  +  +    G+ V      G  + S+ K  T  
Sbjct: 193 AFFSGMEQSVTNHDVRLGVIKSFVFALLVAWICTGRGYFVQTIRGAGFGAESVSKVTTQA 252

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV S   V+I D L      
Sbjct: 253 VVMSSISVLIFDYLLTAVLL 272


>gi|256422329|ref|YP_003122982.1| hypothetical protein Cpin_3314 [Chitinophaga pinensis DSM 2588]
 gi|256037237|gb|ACU60781.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 245

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/243 (30%), Positives = 126/243 (51%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G  +  TG F  + ++        IRQ + VG   V +V +  F+ G V+  Q   
Sbjct: 1   MEIVGDQVLFTGRFARNIFRGGFEWGEFIRQCFIVGYLSVGLVGITGFIIGLVMTLQTQP 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L  FGAE +   ++SI  +REIG ++ A++ AG+  S+I AE+GSMK+ E+IDA+    
Sbjct: 61  TLKDFGAESYVPGMVSISIIREIGPVIIALICAGKIASSIGAELGSMKVTEQIDAMEVSA 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            + V+ L+  RI A  I +PLLTI+A+  A++G  + +     +   +FF +       +
Sbjct: 121 ANPVQYLVVTRILACTIMVPLLTIMADGLAMLGGWVGVNIQDHVSATLFFKKSFKALEFS 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++   +IK  F   AIG V   +G+     + S+GK   + VV +   +I+ID++     
Sbjct: 181 DVVPSVIKTFFFGYAIGFVGCYKGYHSARGTESVGKAANSAVVSASLWIILIDAIAVQIT 240

Query: 369 FAI 371
             I
Sbjct: 241 NLI 243


>gi|238928172|ref|ZP_04659932.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
 gi|238884132|gb|EEQ47770.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas flueggei ATCC 43531]
          Length = 255

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +    +G V+   GE      + +  + S+I QM ++G   + +V L    
Sbjct: 5   LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTLLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +MK+
Sbjct: 64  TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R M +  V  LI PR+ A ++ +P+LT+  +   ++G       Y  I    F
Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  A + ++  GLIKA F    I ++    G      +  +G      VV SI ++
Sbjct: 184 LHSITQYAEIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPGGAEGVGTATMQTVVTSIIVI 243

Query: 358 IIIDSLFAIFYF 369
            I++++   F F
Sbjct: 244 FILNAVLTFFLF 255


>gi|206603562|gb|EDZ40042.1| Putative integral membrane protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 255

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 126/249 (50%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                     I G ++  T       ++      +   Q+  VG    PVV++ +  TG 
Sbjct: 7   VGRKCIGLFSISGDLLLTTVTALTGMFRPAFLWWNFFVQLVKVGADSTPVVLVTALFTGM 66

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A Q      +F AE     ++S+   RE+G ++T +M++GRSGS++ AE+G+M++ E+
Sbjct: 67  VLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQ 126

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ ++ +  +  L++PR +A +I+LPLLT++A+F  I+G   V      +P  V+   
Sbjct: 127 IDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKG 186

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L + ++GL+KA      + I +   G+     +  +G+ VT  VV S   ++++
Sbjct: 187 IARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVL 246

Query: 361 DSLFAIFYF 369
           D     + F
Sbjct: 247 DYFLTAWLF 255


>gi|312888063|ref|ZP_07747647.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311299544|gb|EFQ76629.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 256

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 130/255 (50%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +  ++D+       G +   TG F +   K +  +  L+ Q Y +G    P+V L  F+ 
Sbjct: 1   MSLLSDTNDFLEQTGKISRFTGHFFSRGIKPRFEIKELLAQCYLIGYKSFPLVGLTGFIM 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+  Q    L  +G +     ++ I  +REIG ++TA++ AG+ GS+I AE+GSMK+ 
Sbjct: 61  GLVLTMQLRPSLVVYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E+IDA+   G +  + L++ R+ A  + LP+LT+L +  ++ GA I +          FF
Sbjct: 121 EQIDAMDVSGTNPFKYLVATRVVATTLMLPVLTLLGDAISLFGAYIGVNINAVTSVRFFF 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           ++   + T ++I   +IK  F   A+GI+   +GF     +  +G    + VV S  ++ 
Sbjct: 181 TQVFQSLTYSDIVPAIIKTLFFGFAVGIIGCYKGFNSTKGTQGVGNSANSAVVLSSVVIF 240

Query: 359 IIDSLFAIFYFAIGI 373
           +ID L       +G+
Sbjct: 241 VIDLLTVQLTNLLGL 255


>gi|166363947|ref|YP_001656220.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843]
 gi|166086320|dbj|BAG01028.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843]
          Length = 264

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+        K    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA  F   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LPLLTI++  + ++G   +    Y I +++F     +     ++ 
Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLFISDSLYGISYSLFLQSAQNFLETWDLI 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370
           + ++K+      I I+    G      +  +G+  TT VV S+  + + +   + + +  
Sbjct: 198 SSMLKSLIFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQG 257

Query: 371 IG 372
            G
Sbjct: 258 TG 259


>gi|195952560|ref|YP_002120850.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932172|gb|ACG56872.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1]
          Length = 327

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 27/336 (8%)

Query: 38  DSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
               +D+  I ++DT GA  ++  +EKY  K +L G   HIE +  +         K +K
Sbjct: 19  KEHTIDIKDIEKLDTFGAIFVLELLEKYKDK-ELVGKKEHIEFIQKVKELLKYNNEKTKK 77

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
                                   IN S +    +G+++ ++ +             S +
Sbjct: 78  DSN---------------------INLSLTFLEYIGILVYHSFKNIKD-----IEFESFL 111

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
           +++   G+  + ++ ++SF+ G VIA Q A +L  FGA IF ++L+ I   RE+G L+T 
Sbjct: 112 KEVESSGIGSLFILAVLSFLVGIVIAYQSANELISFGANIFIVNLIGISAFRELGPLITG 171

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +++AGR  S   A IG   + EEIDAI  M +    +   PRI  L +  PLL + ++  
Sbjct: 172 IILAGRVSSGYTANIGIRNVYEEIDAIEVMSISPYVVFGLPRIITLTLITPLLVLFSSNV 231

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            ++G +I+     DIPF +FF R         +F GL+KAPF    IG+V    GF  G 
Sbjct: 232 MVLGGAIIANTSLDIPFDMFFDRLREVVGFNQVFVGLVKAPFFGAYIGLVGTYFGFYSGK 291

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
               +   V   VV SIS +I+ID+LF+I +  IGI
Sbjct: 292 KPEDVTLNVMKSVVISISGIIVIDALFSIIFAKIGI 327


>gi|152999232|ref|YP_001364913.1| hypothetical protein Shew185_0693 [Shewanella baltica OS185]
 gi|160873845|ref|YP_001553161.1| hypothetical protein Sbal195_0723 [Shewanella baltica OS195]
 gi|217971905|ref|YP_002356656.1| hypothetical protein Sbal223_0714 [Shewanella baltica OS223]
 gi|304411204|ref|ZP_07392819.1| protein of unknown function DUF140 [Shewanella baltica OS183]
 gi|307306499|ref|ZP_07586242.1| protein of unknown function DUF140 [Shewanella baltica BA175]
 gi|151363850|gb|ABS06850.1| protein of unknown function DUF140 [Shewanella baltica OS185]
 gi|160859367|gb|ABX47901.1| protein of unknown function DUF140 [Shewanella baltica OS195]
 gi|217497040|gb|ACK45233.1| protein of unknown function DUF140 [Shewanella baltica OS223]
 gi|304350397|gb|EFM14800.1| protein of unknown function DUF140 [Shewanella baltica OS183]
 gi|306910790|gb|EFN41218.1| protein of unknown function DUF140 [Shewanella baltica BA175]
 gi|315266072|gb|ADT92925.1| protein of unknown function DUF140 [Shewanella baltica OS678]
          Length = 261

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  IV  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T  VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|327479601|gb|AEA82911.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri DSM 4166]
          Length = 265

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                      LG                +     L++Q+Y VGV  + +V++     G 
Sbjct: 13  LGRAGLDVLAALGRSTIFLVHVLFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGIFIGM 72

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK  E+
Sbjct: 73  VLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMKSTEQ 132

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  +G+D ++ +I+PR+WA  ISLPLLT++ N   I G ++V   +  +    F++ 
Sbjct: 133 LSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGSFWAN 192

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++    +++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +   V+ 
Sbjct: 193 MQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASLAVLG 252

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 253 LDFILTALMFG 263


>gi|146281424|ref|YP_001171577.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri A1501]
 gi|145569629|gb|ABP78735.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           stutzeri A1501]
          Length = 265

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                      LG                +     L++Q+Y VGV  + +V++     G 
Sbjct: 13  LGRAGLDVLAALGRSTIFLVHALFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGIFIGM 72

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK  E+
Sbjct: 73  VLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMKSTEQ 132

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  +G+D ++ +I+PR+WA  ISLPLLT++ N   I G ++V   +  +    F++ 
Sbjct: 133 LSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGSFWAN 192

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++    +++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +   V+ 
Sbjct: 193 MQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASLAVLG 252

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 253 LDFILTALMFG 263


>gi|258645550|ref|ZP_05733019.1| toluene tolerance ABC efflux transporter, permease [Dialister
           invisus DSM 15470]
 gi|260402906|gb|EEW96453.1| toluene tolerance ABC efflux transporter, permease [Dialister
           invisus DSM 15470]
          Length = 253

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 2/249 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             + +    H LG VI      C      +      I+Q   +GV   P+V L    TG 
Sbjct: 7   LGSKTIGLFHQLGAVILLLNSSCKELNHLR--FRETIKQCLDLGVLSFPIVALTLLFTGM 64

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++ Q A +L+++GA      +++I   RE+G +L  V++AGR G+AI AEIG+M++ E+
Sbjct: 65  VLSVQIAGELTKYGAGFTVGAIVAIGMGRELGPVLCGVVLAGRVGAAITAEIGTMRVTEQ 124

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R M +  V  L+ PR+ + +  LP+LT+      + G  IV    + +   VF   
Sbjct: 125 IDALRCMAVSPVGYLVLPRLLSCMAMLPILTVFGVSIGVFGGMIVASLTHGVSSYVFIHS 184

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                  ++++ G++K+      + +V    G      +  +G+  T  VV SI ++   
Sbjct: 185 IEVFCIPSDLYIGVMKSVVFGMIVALVGCDRGMTCEAGAEGVGRATTQSVVYSIIMIFAA 244

Query: 361 DSLFAIFYF 369
           + L +   F
Sbjct: 245 NYLLSSILF 253


>gi|16330753|ref|NP_441481.1| hypothetical protein slr1344 [Synechocystis sp. PCC 6803]
 gi|1653246|dbj|BAA18161.1| slr1344 [Synechocystis sp. PCC 6803]
          Length = 283

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/249 (26%), Positives = 120/249 (48%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + +  S     G  I   G      +  K    +  +Q+ +VG + +P+ ++ + V G +
Sbjct: 24  LAELSSWLRRSGQAILLLGNTSFQLFTGKIDGRNTTQQLMFVGPASLPITLITAAVIGMI 83

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
              Q A +   FGA      ++ +   RE+  ++TAV++AGR GSA  AEIG+M++ E+I
Sbjct: 84  FTIQVAREFLAFGAGSAVGGILMLALGRELCPIMTAVVVAGRVGSAFAAEIGTMRVTEQI 143

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  +  + V  L+ PR+ A  I +P L++LA  + ++G +++    Y I   VFF   
Sbjct: 144 DALYMLNTNPVEYLVIPRLLACCIMVPTLSVLALVTGMMGGAVISSNVYGIANQVFFESI 203

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +  T  +IF G +K       I I+    G      +  +G+  T  VV S+  + + +
Sbjct: 204 QTFVTPWDIFCGPVKGIVFGVLIAIIGCNWGLTTRGGAKGVGESTTAAVVTSLLAIFVSN 263

Query: 362 SLFAIFYFA 370
            L +   F 
Sbjct: 264 FLMSWIMFQ 272


>gi|126175856|ref|YP_001052005.1| hypothetical protein Sbal_3661 [Shewanella baltica OS155]
 gi|125999061|gb|ABN63136.1| protein of unknown function DUF140 [Shewanella baltica OS155]
          Length = 261

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  IV  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T  VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|302755016|ref|XP_002960932.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10
           [Selaginella moellendorffii]
 gi|300171871|gb|EFJ38471.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10
           [Selaginella moellendorffii]
          Length = 342

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 115/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+    + + +  + + ++Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 95  ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TAV++AGR GSA  AE+G+M+++E+ D +R +G D V 
Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI+PR+ A  +++P LT++     +  + ++    Y +   +            +I + 
Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +IK+      I IV+   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331


>gi|113969024|ref|YP_732817.1| hypothetical protein Shewmr4_0680 [Shewanella sp. MR-4]
 gi|114048831|ref|YP_739381.1| hypothetical protein Shewmr7_3342 [Shewanella sp. MR-7]
 gi|113883708|gb|ABI37760.1| protein of unknown function DUF140 [Shewanella sp. MR-4]
 gi|113890273|gb|ABI44324.1| protein of unknown function DUF140 [Shewanella sp. MR-7]
          Length = 261

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|117919131|ref|YP_868323.1| hypothetical protein Shewana3_0679 [Shewanella sp. ANA-3]
 gi|117611463|gb|ABK46917.1| protein of unknown function DUF140 [Shewanella sp. ANA-3]
          Length = 261

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      +       G              + +     L+RQ+Y VGV  + ++++   
Sbjct: 6   SIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|193215278|ref|YP_001996477.1| hypothetical protein Ctha_1571 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088755|gb|ACF14030.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 265

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 121/243 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S   ++      +     +    K +   ++ Q Y  G   +P+V++ S   G+++  
Sbjct: 16  IKSFFLVMQEFFLFSLRTFTTIGAIKKYWRDILNQAYISGTESIPIVLVSSISIGSLLTM 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +   QL +FGA++ +    ++  +RE+G +LT +M++ R G+   +E+G+MKI+E+IDA+
Sbjct: 76  EVGNQLEEFGAKLMTGRTTALSVIRELGPMLTGLMLSARVGARNGSELGAMKISEQIDAL 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D +  L+ PR+ A ++    LT L++F+ +   +++   Y+ I    +++   + 
Sbjct: 136 RAFGTDPIAKLVMPRLIASLLMFLPLTALSDFAGLTSGALIAEHYHHIDPGFYWNSVLNL 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +   G +K P  A  I +V+   GF     +  +G+     +V S  +V+I +   
Sbjct: 196 LIVKDFVVGFLKPPVFAVIITLVSCFNGFDATGGTAGVGRSTIKGIVVSSGLVLIANFYV 255

Query: 365 AIF 367
           +  
Sbjct: 256 SKL 258


>gi|256828811|ref|YP_003157539.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577987|gb|ACU89123.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM
           4028]
          Length = 263

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               S      +G     +          +  +  ++  +Y++G   + ++IL++F TG 
Sbjct: 11  LGATSLGIIKNVGQWGVFSLTAVLGMIHIRRLIPKILYDIYFIGFKSLNIIILVAFFTGM 70

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG + L +F AE      +++  +RE+G +LTA+M+ GR+GS+I AEIG M+I+E+
Sbjct: 71  VLGLQGYYTLIKFSAEGMLGVAVALSLVRELGPVLTAIMLIGRAGSSISAEIGIMRISEQ 130

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TM +D VR L++P+I A +I  PLLT + +   I+G              +FFS+
Sbjct: 131 IDALSTMDVDPVRYLVTPKIIASLICFPLLTAIFDCVGILGGYFSSVL-LSSRSGIFFSK 189

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355
             S+  L+++  G IK+   A  +  ++   G+          +  +    T+ VVQS  
Sbjct: 190 IQSSLLLSDVTGGFIKSFVFAFIVITISCYCGYYTHQNQSSAGAEGVSNSTTSAVVQSCV 249

Query: 356 IVIIIDSLFAIFYF 369
            V++ D +   F  
Sbjct: 250 YVLVSDYVITSFLM 263


>gi|218782260|ref|YP_002433578.1| hypothetical protein Dalk_4431 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763644|gb|ACL06110.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 268

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 12/273 (4%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
            S F           G+K + F+ +        G +           +      + ++ Q
Sbjct: 1   MSVFAGVVVEPVSATGRKTIAFVQEM-------GRMFIFLMHSVLHMFTLPFQFVKILTQ 53

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +  +G   + VV LI   TG V+  Q    L+ FG+E      +    ++E+G +L A+M
Sbjct: 54  INIIGAQSLYVVSLIGLFTGMVLGLQLYNALANFGSEGMLGTSIVHTLIKEMGPVLAAIM 113

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +  R+GSA+ AEIG M+I+EEIDA+ TM ++ +R L+SPR+ A IIS PLLT L +  A+
Sbjct: 114 VTARAGSAMAAEIGIMRISEEIDALDTMQINPIRFLVSPRLAAAIISFPLLTALFDVIAL 173

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV---- 335
            G  +   K   +  A ++    ++  + +I  G +KA   A  +  V   +G+      
Sbjct: 174 FGGYLTGCKLKGLNDATYWYTVENSLVMEDINGGFLKAIVFAVIVITVCCYQGYTTHMRP 233

Query: 336 -GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            G  +  +    T+ VV S  ++++ D +   F
Sbjct: 234 NGFGAKGVSASTTSAVVMSCVLILMADFVLTAF 266


>gi|302767312|ref|XP_002967076.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii]
 gi|300165067|gb|EFJ31675.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii]
          Length = 342

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 115/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+    + + +  + + ++Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 95  ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TAV++AGR GSA  AE+G+M+++E+ D +R +G D V 
Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI+PR+ A  +++P LT++     +  + ++    Y +   +            +I + 
Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +IK+      I IV+   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331


>gi|115378323|ref|ZP_01465489.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
 gi|115364677|gb|EAU63746.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 274

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 121/243 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +  +LG +   TG   + + +      +L+    ++GV  +P+ +L S   G VI+ 
Sbjct: 28  VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 87

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  F L++FG +     ++ +   RE+  +LTA+ +  R GS + AE+G+M + E++DAI
Sbjct: 88  QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 147

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G D +R L+ PR+ A ++ +P LT+LA+   +   ++V+   Y I F +FF      
Sbjct: 148 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 207

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +  +G+IK       IG+V   +G  V   +  +G+  T  V  +   V + D   
Sbjct: 208 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 267

Query: 365 AIF 367
              
Sbjct: 268 TKI 270


>gi|91215888|ref|ZP_01252857.1| ABC transporter permease protein [Psychroflexus torquis ATCC
           700755]
 gi|91185865|gb|EAS72239.1| ABC transporter permease protein [Psychroflexus torquis ATCC
           700755]
          Length = 262

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/244 (29%), Positives = 123/244 (50%), Gaps = 1/244 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G +      F             LIRQ + +G     +V +  F+ G V   Q  
Sbjct: 16  FFEEIGDMTYFAIRFFKEVVTSPFEWKELIRQCFQMGNRSFLLVGVTGFILGLVFTLQSR 75

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L +FGA  +   ++SI  +REIG ++ A++ AGR GS+I AE+GSMK+ E+IDA+   
Sbjct: 76  PTLLEFGAVSWMPSMVSISIVREIGPVIIALICAGRIGSSIGAELGSMKVTEQIDAMEVS 135

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G +  + L+  RI A  + LPLL I+ +  A+ G++IV     ++ + ++F++       
Sbjct: 136 GTNPFKYLVVTRILATTLMLPLLIIMGDAVALFGSAIVENLMGEVSYLLYFNKVFDALKF 195

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++I    IK+ F   AIG+V   +G+     +  +G+     VV +  ++ +ID + A+F
Sbjct: 196 SDIIPATIKSFFFGFAIGLVGCYKGYNCSKGTVGVGEASNAAVVYTSMLLFVIDFI-AVF 254

Query: 368 YFAI 371
              I
Sbjct: 255 LTDI 258


>gi|67926111|ref|ZP_00519354.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501]
 gi|67852045|gb|EAM47561.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501]
          Length = 263

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L   I   G+      K K    + + QM  VG   + + ++ +   G V 
Sbjct: 9   RGLGIWFERLIAAILLGGQVFFHLLKTKIHRRNTLDQMSVVGPESLTIALITAGFVGMVF 68

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+ID
Sbjct: 69  TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +  D V  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   
Sbjct: 129 ALYMLKTDPVDYLVVPRVLACCLMLPVLNILSLITGMTGGLLIANGLYDISPYVFLTSIR 188

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L ++ T +IK+      I ++    G      +  +G+  TT VV ++  V +++ 
Sbjct: 189 NFLELWDLVTSVIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLAVFVVNF 248

Query: 363 LFA-IFYFAIG 372
             + + +   G
Sbjct: 249 FLSWVMFQGTG 259


>gi|225619573|ref|YP_002720830.1| ABC transporter permease [Brachyspira hyodysenteriae WA1]
 gi|225214392|gb|ACN83126.1| Ttg2B, ABC-type transport system, permease component [Brachyspira
           hyodysenteriae WA1]
          Length = 268

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 2/248 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG   +   E    +++       L  Q+  +GV    V  +    TG V++ Q A
Sbjct: 21  FLATLGEFATLMIEVFRYTFRPTFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80

Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             L     G   F   ++    ++E+  +L A++ AGR GS++ AEIG+M+++E++DA++
Sbjct: 81  VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+  + +  +  PR WA +ISLP+LT+ A+   ++G ++V           +F R  +  
Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSADVIGVLGGAVVTVFVLRSDPMHYFDRAIAVI 200

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +    LIK+      + +++   GF     +  +GK  TT VV S  I++I D +  
Sbjct: 201 SVGDFIGSLIKSTIFGAEVMLISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260

Query: 366 IFYFAIGI 373
                 G+
Sbjct: 261 SILGMFGM 268


>gi|162448883|ref|YP_001611250.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
 gi|161159465|emb|CAN90770.1| putative ABC transporter permease protein [Sorangium cellulosum 'So
           ce 56']
          Length = 287

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 111/245 (45%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
            ++      LG     T     S  +    + S + QM  +GV    +  + +   G V+
Sbjct: 35  ENAVGFVEHLGQFGRMTWGALRSMVERPLEIRSTLYQMEALGVRSAAIASVTALFVGMVM 94

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q A  L +FG   ++  ++ +   RE+   LTAV++ GR G+ I AE+GSM + E+ID
Sbjct: 95  AVQFAIGLQKFGGMEYTGRIIGLSFSRELAPTLTAVIVGGRIGAGIAAEVGSMAVTEQID 154

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           AIR +G   ++ L+ PR+ A I+ +P+L   A      GA +V    + IP   F     
Sbjct: 155 AIRALGASPLKKLVLPRLLASIVVMPVLGAFALVLGFGGAMLVCATEFGIPAGFFLRTAL 214

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
            + T  + F+G+ K PF    I +V    G      +  +G   T  VV +   ++I D 
Sbjct: 215 GSVTFMDYFSGMYKTPFFGAIIALVGCHFGLITRGGTEGVGHATTRTVVVTSITILIADF 274

Query: 363 LFAIF 367
                
Sbjct: 275 FLTKM 279


>gi|303230959|ref|ZP_07317702.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514341|gb|EFL56340.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 253

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG+ ++  +++  +   ++   I       A           +++QM ++GV  +
Sbjct: 2   NWLEVIGRNVIAGLSNVGTAMLLVWQTIKQLKMLNAWH---------VLQQMAHLGVDSL 52

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P++ L     G V+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+AI
Sbjct: 53  PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG+MK+ E+IDA+R M ++ +  L+ PR+ A +I +P+L        I G   V   
Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATA 172

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +  A +       +T+++   GLIK+      I +V   +G    + + ++G   T+
Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV SI +V +++   +   F
Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253


>gi|108761216|ref|YP_628530.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
 gi|108465096|gb|ABF90281.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
           1622]
          Length = 250

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 118/243 (48%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG +   TG+  + + +       L+     +GV  +P+ +L +   G VI+ Q  +
Sbjct: 8   LESLGALSRMTGQVFSRAVRPPFDWRGLVYHTESLGVRSLPIALLTAMFAGLVISLQFGY 67

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            LS+FG +     ++ +   RE+  +LTA+ +  R GS I AE+G+M + E++DAIR +G
Sbjct: 68  FLSRFGVQYTVGRVVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVDAIRALG 127

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D +R L+ PR+ A +I LP+LT+ A+   ++  ++V+   Y I   +FF        + 
Sbjct: 128 ADPLRKLVVPRVLACLIVLPVLTVFADVVGLVAGALVVNIQYAITLNLFFQGALDAVLMP 187

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +  +G+ K       IG+V    G  V   +  +G+  T  V  +   V + D       
Sbjct: 188 DFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLADFFITQLT 247

Query: 369 FAI 371
            ++
Sbjct: 248 LSL 250


>gi|22298988|ref|NP_682235.1| hypothetical protein tlr1445 [Thermosynechococcus elongatus BP-1]
 gi|22295170|dbj|BAC08997.1| ycf63 [Thermosynechococcus elongatus BP-1]
          Length = 267

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 120/239 (50%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+      + +  L +LI QM  VG + + V ++ +   G V   Q A +  
Sbjct: 20  LGTALLLGGQVIYRVLRGRIALRNLIEQMALVGPASLSVALITAAFVGMVFTIQVAREFI 79

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      +++I   RE+G +LTAV++AGR GSA  AEIG+MK+ E+IDA+  +G + 
Sbjct: 80  AFGATSAVGGVLAIALARELGPVLTAVVLAGRVGSAFAAEIGTMKVTEQIDALYMLGTNP 139

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR  A ++ LP+L ILA  + + G  I+    Y IP  V+     +     +++
Sbjct: 140 VDYLVVPRFIACVVMLPILNILALVTGLWGGLIIGDYLYGIPPGVYIESIQNFLQTWDLW 199

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +IK+      + I+    G      +  +G+  T  VV S+  + I++   +   F 
Sbjct: 200 SSIIKSGIFGGVVAIIGCSWGITTTGGAKGVGQSTTAAVVISLLAIFILNFFLSWALFG 258


>gi|255533344|ref|YP_003093716.1| hypothetical protein Phep_3461 [Pedobacter heparinus DSM 2366]
 gi|255346328|gb|ACU05654.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366]
          Length = 244

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190
            G  +           KFK +L ++ +QM ++GV  + ++ +IS   GAV+  Q AFQL 
Sbjct: 6   FGRYLLLLKAVFRRPEKFKIYLKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S F  +     +     + E+   ++A+++AG+ GSAI +EIG+M+++E+IDA+  MG++
Sbjct: 66  SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I A I  +PLL I++ F +I G  I       +  A +     +      I
Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSPAEYIQGITTDFNPYTI 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              L+KA      I  V   EGF V   +  + +  T  VV S   ++  D +      
Sbjct: 186 TVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCISILACDYIVTQLLL 244


>gi|163739574|ref|ZP_02146983.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis
           BS107]
 gi|163741440|ref|ZP_02148831.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161385174|gb|EDQ09552.1| membrane protein [Phaeobacter gallaeciensis 2.10]
 gi|161387033|gb|EDQ11393.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis
           BS107]
          Length = 266

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 116/254 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +      +    +G V        +   +   +   L+  +  VG   +PVV L +  
Sbjct: 13  LARLGQMVLAGLGAVGRVTLFGLSTFSHMLRPPYYPRELLNALLQVGWLSLPVVGLTAIF 72

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 73  TGAALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L++PR+ A +I++P+L  + +   I+G  +V  +      A +
Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    L +I + L+K          +    G   G  +  +G+     V  +  ++
Sbjct: 193 LKNTVDFLELRDIVSSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 253 LAANFVLTGIFFSL 266


>gi|73666683|ref|YP_302699.1| hypothetical protein Ecaj_0050 [Ehrlichia canis str. Jake]
 gi|72393824|gb|AAZ68101.1| protein of unknown function DUF140 [Ehrlichia canis str. Jake]
          Length = 265

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 120/263 (45%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
           F  LH  +   +        +    +G       +F  + +    +   + +Q   +   
Sbjct: 3   FLRLHLGLFWLLETVGKYVINLIFNIGHSFVFFVKFVCNCFMPPYYYGVIFKQFIEIFFF 62

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+V + +  TGAV+  Q +  +    +  F   ++ +  +RE+G +L  ++IAGR G+
Sbjct: 63  SLPIVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGA 122

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+M+I E+IDA+ T+  +  + LI PRI + +I++PLL + A+     G  IV 
Sbjct: 123 AIAAEIGTMRITEQIDALFTLDTNPFKYLIVPRIISAMIAMPLLILCADLIGAYGGYIVG 182

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                    ++         + ++  GLIKA      I  +    G+     +  +G   
Sbjct: 183 SYQLGYTPEIYVRGIMKFLHVKDVILGLIKATVFGFIISFMGCYSGYYCSGGARGVGMAT 242

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T  VV S   +I+++ +  +FY 
Sbjct: 243 TYVVVVSSMFIILLNYVITVFYS 265


>gi|116749878|ref|YP_846565.1| hypothetical protein Sfum_2450 [Syntrophobacter fumaroxidans MPOB]
 gi|116698942|gb|ABK18130.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 266

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 2/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            + F+    S A++    +             +  L + + QM  VGV  +P+V L+SFV
Sbjct: 14  TILFLRHLTSIAYLFRDTMRWAIVKPLQGKPLR--LRAALIQMDEVGVKSIPIVALVSFV 71

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G ++  Q A+QL +FGA  ++  L  +   RE+  LLTA+++AGR  +A  AE+G+M +
Sbjct: 72  IGIILVLQTAYQLEKFGAINYAASLAGVALTREMAPLLTAIVVAGRVSAAFTAELGTMLV 131

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEI A+  M ++ V  L+ PR  A+++ LP LT+LA+   +IG   V      I  +++
Sbjct: 132 TEEILALEVMAINPVAYLVVPRFIAMLVMLPCLTVLADLIGMIGGYAVGTTAVGIRSSLY 191

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                    L +I TGL K+   A  I +V     F V   +  +GK     VV S+  +
Sbjct: 192 IQNTIDALLLKDILTGLTKSVVFAGIIAMVGCYMAFVVRGGAEGVGKATMISVVTSLISI 251

Query: 358 IIIDSLFAIFYF 369
           I+ D  F   ++
Sbjct: 252 ILADCFFTTVFY 263


>gi|297569270|ref|YP_003690614.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925185|gb|ADH85995.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 264

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 6/259 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +    +      LG +        A  +K    L  +IRQ+  +G + +PV+   + 
Sbjct: 6   NIERVGERTLYVVGDLGRMGGFLARALAGLFKRPFRLAEVIRQIRLIGANSLPVIFFTAA 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+  QG + L +FGAE     ++++  +RE+G +LTA+M+ GR+GSA+ AEIG M+
Sbjct: 66  FTGMVLGLQGYYTLRKFGAEGALGTMVALSLVRELGPVLTALMVIGRAGSAMCAEIGIMR 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
            +E+IDA+  M +D  R LI+P+  A +IS+PLLT++ N   I G  +       +    
Sbjct: 126 NSEQIDALECMAVDPFRYLIAPKFLATVISIPLLTMIFNVVGIFGGYLAGVVLLGVNAGS 185

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCV 350
           +F+    +    +I  G IK+      +  +    G+ V      G  +  +    T  V
Sbjct: 186 YFAAMEQSVLAQDINMGFIKSLVFGLLVVWICSGRGYFVHQIRGAGFGAEGVSCATTQAV 245

Query: 351 VQSISIVIIIDSLFAIFYF 369
           V +   V++ + L      
Sbjct: 246 VLASISVLLWNYLLTAILL 264


>gi|297171834|gb|ADI22824.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [uncultured
           Oceanospirillales bacterium HF0500_29K23]
          Length = 260

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 124/249 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG V     +   S +  +     L+ Q++++GV    VV+L    TG V+  
Sbjct: 9   LKDAFAGLGSVTVLFLDTVRSIFAKRFRGRDLVEQLHFIGVKSQSVVLLTGAFTGMVMCA 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q   Q  +   +   + ++++   RE+G +LT++MIAGR G+A+ A++G+MK+ E+IDA+
Sbjct: 69  QFYIQFHKVKMDSAVMSVVTVAMARELGAVLTSLMIAGRVGAAMAAQLGTMKVTEQIDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           RT+    V  L++PR+ A++ISLPLLT  A   +++   +V      +     +S     
Sbjct: 129 RTLATSPVDYLVAPRLLAMLISLPLLTAEAIAISMVSGMLVAVYLLGLDPVFLWSNMVFY 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +I+ GLIKA   A  I  VA  +G   G  +  +GK  T  VV +   +++ +   
Sbjct: 189 TGSVDIWMGLIKAFIFAGIIATVACHKGMHCGQGAEGVGKATTEAVVAASISILVSNFFV 248

Query: 365 AIFYFAIGI 373
            +    + I
Sbjct: 249 TLVLNNLLI 257


>gi|312890492|ref|ZP_07750028.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311296950|gb|EFQ74083.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 257

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 3/245 (1%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G   +    F  + +         +RQ Y +G   + +V + SF+ G V+  Q  
Sbjct: 12  LMEEVGEQATFFTGFFRNLFTGGFEWSEFVRQCYEIGYRSITLVGITSFIMGVVLTLQSR 71

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L +FGA      ++ +  +REIG ++TA++ AG+  S I AE+GSMK+ E+IDA+   
Sbjct: 72  PTLVKFGASSMLPFMVCVSIIREIGPVITAIICAGKISSGIGAELGSMKVTEQIDAMEVS 131

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G + ++ L+  RI A  I +P+LT++ +   + G  + +       + ++F++  S+   
Sbjct: 132 GANPMQYLVVTRILATTIMIPILTLMGDVLGLFGGFLAVHFADHTSWQLYFNKCVSSVDF 191

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL---F 364
           +++   +IK  F   A+G +   +GF     + S+G    + VV +   +  +D +    
Sbjct: 192 SDLLPAVIKTVFFGFAVGFIGCYKGFNSNRGTESVGIAANSAVVSASLWIFFLDVIAVQI 251

Query: 365 AIFYF 369
              +F
Sbjct: 252 TQLFF 256


>gi|89068948|ref|ZP_01156330.1| membrane protein [Oceanicola granulosus HTCC2516]
 gi|89045529|gb|EAR51593.1| membrane protein [Oceanicola granulosus HTCC2516]
          Length = 258

 Score =  185 bits (471), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 115/253 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    + +    +G ++    E  +   +   +       +  VG   +PVV L +F 
Sbjct: 5   LARIGAATLALLAGIGRMVIFVAETLSHLVRPPFYAREFGHAVMSVGWQSLPVVGLTAFF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     ++++  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 65  TGGALALQIYSGGARFSAEALVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+ T+  + ++ L  PR+ A ++++P+L  + +   I G  +V     D   A +
Sbjct: 125 TEQLDALVTLSTNPMKYLTLPRVLAALLTVPVLVAVGDVIGIFGGYLVGIYRLDFNPANY 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +         ++ + L+K         +     G      +  +G+   T VV +  ++
Sbjct: 185 ITNTVDFLEAHDVISSLVKGGAFGLIAALTGCYYGMQSDRGAQGVGRATKTAVVVAAVLI 244

Query: 358 IIIDSLFAIFYFA 370
           +  + L    +F+
Sbjct: 245 LAANFLLTEAFFS 257


>gi|186684391|ref|YP_001867587.1| hypothetical protein Npun_R4269 [Nostoc punctiforme PCC 73102]
 gi|186466843|gb|ACC82644.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102]
          Length = 265

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 1/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             I   G+      + K    + + QM  VG   + + +L +   GAV   Q A +   F
Sbjct: 19  AAIFLGGQVLVHLLRGKIHRRNTLEQMAAVGPDSLFIALLTAIFVGAVFTIQVAREFINF 78

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA      ++SI   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D + 
Sbjct: 79  GAGNIIGGVLSIALTRELSPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPID 138

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + LP+LT+L+  + + G  I+    Y++   VF     +   + +I + 
Sbjct: 139 YLVIPRVIACCLMLPILTLLSLITGMFGGFIIATNVYNLSDTVFLDSARNFLGIWDIISA 198

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
           ++KA      I ++    G      +  +G+  TT VV ++ I+ + +   + + +  +G
Sbjct: 199 MLKAFCFGILIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFVSNFFLSWLMFQGLG 258


>gi|260433527|ref|ZP_05787498.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417355|gb|EEX10614.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 260

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 112/254 (44%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +      +     G V     +  +  ++   +   L   +  +G   +PVV L +  
Sbjct: 7   LAELGRAVLNLLAAFGRVTLFALDALSHIFRPPFYPRELGMALLNIGWLSLPVVGLTTIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G ++  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVMVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L +PR+ A +I++P L  + +   I G   V  +      A +
Sbjct: 127 TEQIDALVTLSTHPMKYLTAPRVLAALITVPALVAVGDIIGIAGGYAVATQNLGFNPAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I + L+K         I+    G   G  +  +G+   + V  +  ++
Sbjct: 187 LKNTVDFLEPLDILSSLVKGAAFGMIAAIMGCYFGMNSGRGAQGVGRATKSSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LAANFVLTGVFFSL 260


>gi|254476887|ref|ZP_05090273.1| membrane protein [Ruegeria sp. R11]
 gi|214031130|gb|EEB71965.1| membrane protein [Ruegeria sp. R11]
          Length = 266

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 113/254 (44%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +           +G V        +   +   +   ++  +  VG   +PVV L +  
Sbjct: 13  LARLGQMVLGALGAVGRVAIFGLSTFSHMVRPPYYPREVLNALLQVGWLSLPVVGLTAIF 72

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 73  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L++PR+ A ++++P+L  + +   I+G  +V  +      A +
Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I + L+K          +    G   G  +  +G+     V  +  ++
Sbjct: 193 LKNTVDFLEARDIISSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 253 LAANFVLTGVFFSL 266


>gi|296125262|ref|YP_003632514.1| hypothetical protein Bmur_0208 [Brachyspira murdochii DSM 12563]
 gi|296017078|gb|ADG70315.1| protein of unknown function DUF140 [Brachyspira murdochii DSM
           12563]
          Length = 268

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 2/248 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG       E    +++       L  Q+  +GV    V  +    TG V++ Q A
Sbjct: 21  FLATLGEFAFLIIEVFRYTFRSSFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80

Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             L     G   F   ++    ++E+  +L A++ AGR GS++ AEIG+M+++E++DA++
Sbjct: 81  VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+  + +  +  PR WA +ISLP+LT+ AN   ++G +IV           +F R  +  
Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSANIIGVVGGAIVTVFVLHSDPMHYFDRAIAVI 200

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           ++ +    LIK+      + I++   GF     +  +GK  TT VV S  I++I D +  
Sbjct: 201 SVGDFIGSLIKSTIFGAEVIIISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260

Query: 366 IFYFAIGI 373
                 G+
Sbjct: 261 SILGLFGM 268


>gi|330807561|ref|YP_004352023.1| putative ABC transporter, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375669|gb|AEA67019.1| putative ABC transporter, membrane protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 265

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F         +LG                 G    L++Q++ VGV  + ++++  
Sbjct: 8   ERVRLFGRSGIDVVAVLGRSSLFLMHALLGRNSTGGGFGLLVKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  ISLP+L I+ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAIIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   ++     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWSNMQNSVDFLDDVLNGVIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|127514231|ref|YP_001095428.1| hypothetical protein Shew_3303 [Shewanella loihica PV-4]
 gi|126639526|gb|ABO25169.1| protein of unknown function DUF140 [Shewanella loihica PV-4]
          Length = 261

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +    +      LG          A   + +     LI+Q+Y +GV  + ++++    
Sbjct: 7   IARLGRGAIDSVTGLGRAGLMLWGAIAKIPRVRKGTPLLIKQLYVIGVQSMVIILVSGLF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 67  IGMVLALQGYNILVGFGTEDSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKS 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +ISLPLL ++     I G  +V  ++  I    F
Sbjct: 127 TEQLSSLEMMAIDPLRQVIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGSF 186

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T  VVQS   
Sbjct: 187 WSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLA 246

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F 
Sbjct: 247 VLALDFLLTAMMFG 260


>gi|117618508|ref|YP_858369.1| putative ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117559915|gb|ABK36863.1| putative ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 259

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + K           +G          A     +     L++Q+Y VGV  V ++++    
Sbjct: 6   VSKLGRSGVRFISAIGRATIMLFHALAGKPAPRKHFPLLVQQLYVVGVQSVAIILVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +++PR WA +IS+PLL  + +   I G  +V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I  G IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 186 WSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFILTAVMFG 259


>gi|159029293|emb|CAO90159.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 264

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 1/242 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+        K    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA  F   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LPLLTI++  + ++G  ++    Y + +++F     +     ++ 
Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLLISDSLYGVSYSLFLQSAQNFLQTWDLI 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370
           + ++K+      I I+    G      +  +G+  TT VV S+  + + +   + + +  
Sbjct: 198 SSMLKSLIFGILIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQG 257

Query: 371 IG 372
            G
Sbjct: 258 TG 259


>gi|330991860|ref|ZP_08315809.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329760881|gb|EGG77376.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 382

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 80/371 (21%), Positives = 151/371 (40%), Gaps = 8/371 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E   T+   +GNW   +   I       +    +  +   D   +   DT     +    
Sbjct: 20  EANRTLVTLSGNW-IAQEGRIPAFPETGLKDVPRGAALEFDTGRLGRWDTSLISFLWELK 78

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                      + T  E    L+        +   P    F          +G+  +  +
Sbjct: 79  RSAREAHVDVHIDTLPESAHKLLDLLPEIPPEPAPPTPHHFAP-----VAAVGQFTLDTL 133

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N+    + +                  +     L+  +   G + + +V +++F+ GA++
Sbjct: 134 NEIGCVSEMGAAAARGGIAALVGRGMMRTV--DLMSDLAAAGPAALLIVGVVNFLVGAIL 191

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A  G+ +L +F A+I+   L++I  +RE+  ++TA+++AGR+G A  A I +M+ NEEID
Sbjct: 192 AFVGSVELHKFAADIYVASLVAIAMVREMSAVMTAIIMAGRTGGAYAARISTMQANEEID 251

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++  G+     LI P + AL  ++PLL +      ++G  +V +    +    +F    
Sbjct: 252 ALQVFGIPVASYLILPSVLALGFTMPLLYLYGCLIGMLGGFVVSFIMLHVSPLGYFHETL 311

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L     G IK+      +G+ + + G   G  +  +G   T  VV  I  VI +D+
Sbjct: 312 QALPLDQFTFGFIKSLVFGTFVGLTSCRIGLKAGRSAADVGIAATKAVVVGIVGVIALDA 371

Query: 363 LFAIFYFAIGI 373
           +FA+    IGI
Sbjct: 372 VFAVIANVIGI 382


>gi|170723417|ref|YP_001751105.1| hypothetical protein PputW619_4256 [Pseudomonas putida W619]
 gi|169761420|gb|ACA74736.1| protein of unknown function DUF140 [Pseudomonas putida W619]
          Length = 265

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I  F   +     +LG                 G    L +Q+Y VGV  + +V +  
Sbjct: 8   ERIRLFGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVAVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|148552943|ref|YP_001260525.1| hypothetical protein Swit_0014 [Sphingomonas wittichii RW1]
 gi|148498133|gb|ABQ66387.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1]
          Length = 264

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 118/248 (47%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +    +G V        + + +   +   L  Q+  +G   +PVV + +  +G
Sbjct: 14  SIGRLFIAALAAIGRVTVFAATTISRAVRPPYYPSRLFEQLMQIGWFSLPVVGMTAIFSG 73

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A +AQQ     S+F A      ++ +  +RE+G +L  +M+AGR  SA+ AE+G+M++ E
Sbjct: 74  AALAQQTFTAGSRFNATSTVPAIVVLGIVRELGPVLVGLMVAGRVSSAMAAELGTMRVTE 133

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++DA+ T+  D  R LI+PR++A +I++PL+ ++AN   I G   V           +  
Sbjct: 134 QLDALTTLRTDPYRYLIAPRLFAALIAIPLMVLVANAIGIFGGYFVAVYKLGFNAVGYLD 193

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 T  ++   L+K+ F    I ++    GF     +  +G+  T  VV +  ++++
Sbjct: 194 TTRQFLTATDLQMALVKSAFFGFFIALMGCYHGFRAQGGAAGVGRATTDAVVSAFILILL 253

Query: 360 IDSLFAIF 367
            + +  + 
Sbjct: 254 SNMIITLM 261


>gi|251771480|gb|EES52057.1| putative integral membrane protein [Leptospirillum
           ferrodiazotrophum]
          Length = 253

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 127/250 (50%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F         I G +           ++      +   Q+  +G     VV++ +F TG
Sbjct: 4   DFSGRLVRVPEIAGSLFMMGLSGLRGIFRPSFLGRNFFEQLLRIGADSTLVVVVTAFFTG 63

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q      +F AE     ++++   RE+G ++T++M+ GRSGSA+ AE+GSM+++E
Sbjct: 64  MVLALQAWIGFRKFNAEGLVGAVVTLSMTRELGPVITSLMVTGRSGSAMAAELGSMRVSE 123

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+ +D V  L++PR++A +++LPLLT LA+   I G  +V  K   +   ++F 
Sbjct: 124 QIDALETLAVDPVDYLVTPRLYASLVALPLLTALADLVGIGGGYVVAVKLLGLSPHLYFQ 183

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L +  +G++K+ F    + + A + GF     +  +G+ VT  VV     +++
Sbjct: 184 EISHYVDLHDFISGIVKSVFFGGLLALWACRTGFVASGGAAGVGRAVTFAVVSGSMSILV 243

Query: 360 IDSLFAIFYF 369
           +D     + F
Sbjct: 244 VDYFLTAWLF 253


>gi|313894582|ref|ZP_07828145.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313440772|gb|EFR59201.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 256

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    IG+ ++  ++   S   ++   I                   + +QM ++GV 
Sbjct: 3   LLNWLESIGRTVINGLSQMGSATLLVWHTIKQLKMINLWH---------VFQQMAHLGVD 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+
Sbjct: 54  SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+MK+ E+IDA+R M +D V  L+ PR+ A ++ +P+L        I G   V 
Sbjct: 114 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMVMVPILAFYGVVIGIAGGYFVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +  + +       +T+++   GLIK+      I +V   +G    + + ++G   
Sbjct: 174 TAIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T+ VV SI +V +++   +   +
Sbjct: 234 TSSVVTSIILVFVLNYFLSTLLY 256


>gi|157963422|ref|YP_001503456.1| hypothetical protein Spea_3608 [Shewanella pealeana ATCC 700345]
 gi|157848422|gb|ABV88921.1| protein of unknown function DUF140 [Shewanella pealeana ATCC
           700345]
          Length = 261

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 127/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +    +      LG              +F+     L++Q+Y +GV  + ++I+   
Sbjct: 6   HIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVIIIVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AE+G MK
Sbjct: 66  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +ISLPLL ++     I G  +V  ++  I    
Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGS 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   +IK+   A  +  +A+  G+ V  +   + +  T  VVQS  
Sbjct: 186 FWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTAVMFG 260


>gi|315125511|ref|YP_004067514.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913]
 gi|315014024|gb|ADT67362.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913]
          Length = 259

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/255 (30%), Positives = 133/255 (52%), Gaps = 2/255 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + K  + +  +   LG               FK     L+RQ+Y VG   + ++++    
Sbjct: 5   LQKIGHKTLGRFAALGRSTQMLASALWHVPNFKKGTPLLVRQLYMVGSQSLLIIVVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L ++ +  AIIGA +V   +  +    F
Sbjct: 125 TEQLSSLEMMAIDPLRRIIAPRFWAGLISMPMLALIFSAVAIIGAHLVGVDWLGVDTGSF 184

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S  +   +I  GLIK+   A  +  +A+ +G+     S  + K  T  VV S   
Sbjct: 185 WSIMQSQVSFEKDILNGLIKSIVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLA 244

Query: 357 VIIIDSLF-AIFYFA 370
           V+  D +  A+ + +
Sbjct: 245 VLGFDFILTAVMFTS 259


>gi|167625602|ref|YP_001675896.1| hypothetical protein Shal_3697 [Shewanella halifaxensis HAW-EB4]
 gi|167355624|gb|ABZ78237.1| protein of unknown function DUF140 [Shewanella halifaxensis
           HAW-EB4]
          Length = 261

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +    S      LG          A   +F+     L+RQ+Y VGV  + ++++    
Sbjct: 7   IARLGRASIEFVIGLGKAGLMLWGAIAHRPRFRKGAPLLLRQLYVVGVQSMVIILVSGLF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AE+G MK 
Sbjct: 67  IGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMKS 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +ISLPLL ++     I G  IV  ++  I    F
Sbjct: 127 TEQLASLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHIVGVEWKGIDSGSF 186

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I   +IK+   A  +  +A+  G+ V  +   + +  T  VVQS   
Sbjct: 187 WSILQASVEWREDIVNCMIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLA 246

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F 
Sbjct: 247 VLALDFLLTAIMFG 260


>gi|162146610|ref|YP_001601069.1| hypothetical protein GDI_0788 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785185|emb|CAP54731.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 373

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 77/346 (22%), Positives = 147/346 (42%), Gaps = 13/346 (3%)

Query: 31  INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISF 87
           + ++           A+   DT     +    ++    H  ++   +     +L  L+  
Sbjct: 38  LRQAAPGRPLTFRSDALGRWDTGLIAFLWDLKQRATQAHLDLRTDTLPDSARKLLDLLPE 97

Query: 88  THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147
                   +    +            +G   ++ + +  +   +         E      
Sbjct: 98  APPPPPTPRPRTFAP--------VTALGAFTIESLTEIGTVTELGVETARGGLEAVTGRG 149

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207
           + +     L+  +   G S + +V +++F+ GA++A  GA QL +F A+I+   L+ I  
Sbjct: 150 RMRSI--DLMSNIRDAGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAM 207

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +RE+  ++TA+++AGR+G A  A I +M+ NEEIDA+   G+     LI P I  L+ ++
Sbjct: 208 VREMSAVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATM 267

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           P L +      ++G   V      +  A +F +  +   L     G IK+ F A  IG+ 
Sbjct: 268 PFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLT 327

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + + G   G  +  +G   T  VV  I  VI +D++FA+    +GI
Sbjct: 328 SCRIGLRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 373


>gi|16329621|ref|NP_440349.1| hypothetical protein slr1045 [Synechocystis sp. PCC 6803]
 gi|81670420|sp|P73009|Y1045_SYNY3 RecName: Full=Probable ABC transporter permease protein slr1045
 gi|1652104|dbj|BAA17029.1| slr1045 [Synechocystis sp. PCC 6803]
          Length = 263

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 1/242 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L      TG+      + +    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 17  LVAAFFLTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVGMVFTIQVAREFI 76

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            +GA      ++S+   RE+  +LTAV+IAGR GSA  AEIG+M++ E++DA+  +  D 
Sbjct: 77  YYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQLDALYMLRTDP 136

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LT L+ F  + G  ++    Y I   +F +   +   L ++F
Sbjct: 137 IDYLVVPRVIACGLMLPILTGLSLFVGMAGGLVISSSLYAINPTIFLNSVQNFTQLWDVF 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370
             L K+      I I+    G      +  +G+  TT VV S+  + I +   + + +  
Sbjct: 197 ACLFKSLVFGVIIAIIGCSWGLTTTGGAKGVGESTTTAVVTSLLAIFISNFFLSWLMFQG 256

Query: 371 IG 372
            G
Sbjct: 257 TG 258


>gi|269104097|ref|ZP_06156794.1| uncharacterized ABC transporter permease component YrbE
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163995|gb|EEZ42491.1| uncharacterized ABC transporter permease component YrbE
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 260

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG++ +             G              + +     L++Q+Y VGV 
Sbjct: 2   ITDFIAAIGRRTLNLCKTV-------GRASLMLYGALICKPQPRKMFPLLLKQLYSVGVL 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SIAIILVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  +V 
Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFTAVGIWGGQLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  I +  ++S   S+  +  +I  GL+KA   A  +  +A+  G+     S  + + 
Sbjct: 175 VDWKGIDYGSYWSVMQSSVDVWYDIGNGLLKAVVFAITVTWIAVFNGYDAVPTSEGISRA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV S   V+ +D +     F 
Sbjct: 235 TTRTVVNSSLAVLGLDFVLTALMFG 259


>gi|167031981|ref|YP_001667212.1| hypothetical protein PputGB1_0966 [Pseudomonas putida GB-1]
 gi|166858469|gb|ABY96876.1| protein of unknown function DUF140 [Pseudomonas putida GB-1]
          Length = 265

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|85713028|ref|ZP_01044065.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina baltica OS145]
 gi|85693131|gb|EAQ31092.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina baltica OS145]
          Length = 258

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++ +           +G  ++            +      ++QMY VGV  + ++++   
Sbjct: 3   RLARLGATVTDAIAGIGRALAMLLGAIIGKPTPRKSWPLFVQQMYVVGVLSLIIIVVSGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA  +S+PLL ++ +   I G  +V   +  +    
Sbjct: 123 ATEQLSSLEMMAVDPLRRVVAPRFWAGFVSMPLLALIFSAVGIYGGYLVGSGWLGVDEGA 182

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S      ++  G+IK+   A  +  +A+ +G+     S  + K  T+ VV +  
Sbjct: 183 FWSVMQSAVDWRDDLMNGIIKSLVFAFVVTWIALYKGYRCEPTSAGISKATTSTVVTASL 242

Query: 356 IVIIIDSLFAIFYFA 370
            ++ +D +     F 
Sbjct: 243 AILGLDFILTALMFG 257


>gi|326795053|ref|YP_004312873.1| hypothetical protein Marme_1781 [Marinomonas mediterranea MMB-1]
 gi|326545817|gb|ADZ91037.1| protein of unknown function DUF140 [Marinomonas mediterranea MMB-1]
          Length = 260

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/252 (31%), Positives = 133/252 (52%), Gaps = 2/252 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           KK+         Q   +G       +  A    ++      L+ Q+Y VGV  + +VI+ 
Sbjct: 2   KKVRNVGQSLFDQLESIGRAGIFLFQTLARLPVRWDESCRLLVNQVYSVGVLSLVIVIVS 61

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
               G V+A QG   L++FG+E     L+++  LRE+G ++TA++ AGR+GSA+ AEIG 
Sbjct: 62  GCFIGMVLALQGYTILAKFGSEQAVGQLLALSLLRELGPVVTALLFAGRAGSALTAEIGL 121

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK  E++ +   MG+D +R +I+PR  A +I +PLL ++ + + I+G  +V   +  I  
Sbjct: 122 MKATEQLSSYEMMGVDPLRRVIAPRFIAGMICMPLLCLIFSATGILGGMLVSVHWLGIYD 181

Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             F+S    +     ++F G+IK+ F ACAI  +A+ +GF     S  +GK  T  VV  
Sbjct: 182 GSFWSLMQQSVYFDIDVFNGIIKSIFFACAITWIAVYQGFECDPTSEGIGKATTRTVVLG 241

Query: 354 ISIVIIIDSLFA 365
              V+ +D +  
Sbjct: 242 SLAVLFLDFILT 253


>gi|304437504|ref|ZP_07397462.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369554|gb|EFM23221.1| ABC superfamily ATP binding cassette transporter permease protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 255

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +    +G V+   GE      + +  + S++ QM ++G   + +V L    
Sbjct: 5   LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIVYQMAHLGADSLLIVGLTLLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  Q A +  ++GA+     +++I   RE+G +L  V+ AGR G+AI AE+ +MK+
Sbjct: 64  TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R M +  V  LI PR+ A ++ +P+LT+  +   ++G       Y  I    F
Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  A L ++  GLIKA F    I ++    G      +  +G      VV SI ++
Sbjct: 184 LHSITQYALLYDMTGGLIKAIFFGNVIAVLGCYYGLHAPSGAEGVGTATMQTVVTSIIVI 243

Query: 358 IIIDSLFAIFYF 369
            I++++   F F
Sbjct: 244 FILNAVLTFFLF 255


>gi|330501880|ref|YP_004378749.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01]
 gi|328916166|gb|AEB56997.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01]
          Length = 265

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F          LG  +           +    L  LI+Q++ VGV  + ++++  
Sbjct: 8   ERLRLFGRAGIDVVATLGRSVLFLLGALFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  IS+PLL ++ +   I G ++V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|294139194|ref|YP_003555172.1| hypothetical protein SVI_0423 [Shewanella violacea DSS12]
 gi|293325663|dbj|BAJ00394.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 258

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +             LG              + KG     ++Q+Y VGV  + ++++   
Sbjct: 4   SLANLGRGGIDLVTGLGRAGLMLWGAVVRKPRLKG-FSLFVKQLYVVGVQSMVLILISGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA ++SLPLLT++     I G  +V  ++  I    
Sbjct: 123 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAVGIYGGHLVGVEWKGIDSGS 182

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+      +  +A+  G+ V  +   + K  T  VVQS  
Sbjct: 183 FWSILQASVEWRQDIVNCLIKSFLFGIVVTWIALYRGYQVTPNPEGISKATTQTVVQSSL 242

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 243 AVLALDFLLTALMFG 257


>gi|225850834|ref|YP_002731068.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Persephonella marina
           EX-H1]
 gi|225645536|gb|ACO03722.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Persephonella marina
           EX-H1]
          Length = 248

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 117/243 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G       E           +  +++ M  +GV+  P++ +  F TG V+  
Sbjct: 4   IKNFVEHTGAAFLLFLETLKVIILSPPKVKHILKYMEEIGVTAAPLIAITGFFTGGVLVV 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +      +F AE     L+S+   RE+  +L A+++  RSGSA+ A IG+MKI E+IDA+
Sbjct: 64  ETYPTFHKFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTMKITEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + M ++ VR LI+PR+ A ++ +P L IL+    ++G   V    Y I   +F  +    
Sbjct: 124 KVMAVNPVRYLIAPRLIASLLMVPALVILSYTFGLLGGYFVGVNLYGINPYLFVEKMKDF 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +I  GL K+   A  I IV+   G+     +  +G+  TT VV S  +V+I+D   
Sbjct: 184 TELYDILGGLYKSMGFATIITIVSCYFGYVTKGGAEGVGRSTTTAVVVSSVLVLIVDYFL 243

Query: 365 AIF 367
              
Sbjct: 244 TAI 246


>gi|23016441|ref|ZP_00056197.1| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Magnetospirillum
           magnetotacticum MS-1]
          Length = 271

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
              F      +G++    I +    A +LG  +   G       +    L  ++ Q   +
Sbjct: 7   PQGFIGFLDRLGRRAAAAIAEFGFGATLLGESLYWLGM--GKKRRQPVRLAPVVAQAMEI 64

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G+  +P+V ++S   G ++A QG + L  FGAE      +++  +RE G L+T +++AGR
Sbjct: 65  GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA+ A +G+M+IN+EIDA+  MG+  VR L+ P + A+++ LP LT+ ++   +  A 
Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMVMLPALTLWSDLVGLFAAG 184

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           + I          +         L +++ GL K+   +  I +V +  G +V   +  +G
Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDVWHGLGKSAIFSVLITLVGVVNGASVTGGAEGVG 244

Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367
           +  T  VV +IS +++ D +F   
Sbjct: 245 RLTTRSVVHAISAIVVTDMIFVFM 268


>gi|113476613|ref|YP_722674.1| hypothetical protein Tery_3053 [Trichodesmium erythraeum IMS101]
 gi|110167661|gb|ABG52201.1| protein of unknown function DUF140 [Trichodesmium erythraeum
           IMS101]
          Length = 249

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+     +  K +  + I QM  VG   + +V+L +   G V   Q A +L  F
Sbjct: 3   AATYLAGQVFVHLFHGKIYRRNTIEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAF 62

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+G +LTAV++AGR GSA  AEIG+MK+ E+IDA+  +  D V 
Sbjct: 63  GTANMVGGMLALTLSRELGPVLTAVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVD 122

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + +P+LT+L   +AI G  I+    YDIP +++     S  TL ++ +G
Sbjct: 123 YLVIPRVIACGVMMPILTLLCLVAAIFGGLIIAVNLYDIPQSMYIDSVRSFLTLWDLCSG 182

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
           L K+      I ++    G      +  +GK  TT VV S+  + I +   +   +  +G
Sbjct: 183 LTKSVVFGVLIAVIGTSWGLTTTGGAKGVGKSTTTAVVTSLISIFIFNFFLSWAMFQGMG 242


>gi|325273317|ref|ZP_08139589.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51]
 gi|324101550|gb|EGB99124.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51]
          Length = 265

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    LIRQ+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVVAVLGRSCLFLFHALVGRGGIGGGFQLLIRQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GLIK+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVATWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|242277489|ref|YP_002989618.1| hypothetical protein Desal_0007 [Desulfovibrio salexigens DSM 2638]
 gi|242120383|gb|ACS78079.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM
           2638]
          Length = 249

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 128/242 (52%), Gaps = 1/242 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +   +         + K   +   LIR +  VG   +P+V +IS  TG ++A Q
Sbjct: 4   LHVLAWMVSRLLGCLRLTPGNKK-SFYRKRLIRDLASVGADSIPIVSVISACTGIILALQ 62

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A QL + GA  +  +L+ +  +RE+G LLTA+++ GRSG+A  AEI +M+I+EEIDA+ 
Sbjct: 63  SAQQLEKVGAISYVANLVGVTIIRELGPLLTAIIVTGRSGAAFTAEIATMQISEEIDALE 122

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG++ VR L+ P++ A++I +P LT+ A+F  I            I    +F+      
Sbjct: 123 VMGIEPVRFLVVPKMIAMLIMVPCLTVWADFVGIFSGGAFSAIALGINEVTYFNNSVEFL 182

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L ++  GL+KA   A AI ++   +GF     +  +G+K T  VV SI ++I++D  F 
Sbjct: 183 KLHDVLAGLVKAGGFAVAITLIGCWQGFLAREGAADVGRKTTNSVVISIFMIILLDLFFT 242

Query: 366 IF 367
             
Sbjct: 243 AL 244


>gi|146305912|ref|YP_001186377.1| hypothetical protein Pmen_0877 [Pseudomonas mendocina ymp]
 gi|145574113|gb|ABP83645.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp]
          Length = 265

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F          LG  +           +    L  LI+Q++ VGV  + ++++  
Sbjct: 8   ERLRLFGRAGIDVVATLGRSVLFLVGAVFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  IS+PLL ++ +   I G ++V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWSNMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|71282011|ref|YP_271183.1| hypothetical protein CPS_4535 [Colwellia psychrerythraea 34H]
 gi|71147751|gb|AAZ28224.1| putative membrane protein [Colwellia psychrerythraea 34H]
          Length = 258

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               + +    LG  +             +     L++Q+Y VGV  + ++++     G 
Sbjct: 7   LGKQTLNMISGLGRAVILLISALMHVPNIRKGTPLLMQQLYSVGVLSLLIIVVSGTFIGM 66

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG   L  +GAE     ++++  LRE+G ++ A++ AGR+GSA+ AEIG MK  E+
Sbjct: 67  VLALQGYTILVGYGAEASLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKATEQ 126

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D +R +I+PR WA  ISLPLL  + +   I+GA +V   +  +    F+S 
Sbjct: 127 LSSLEMMAIDPLRRVIAPRFWAGFISLPLLAAIFSMVGILGAHVVGVDWLGVDGGTFWSV 186

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    +I  G+IK+   A  +  +A+ +G+     S  + +  T+ VVQS  +V+ 
Sbjct: 187 MQDQVDFQKDILNGIIKSIVFAFVVMWIAVYKGYDCEPTSEGISRATTSTVVQSSLLVLF 246

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 247 LDFILTALMFV 257


>gi|224588219|gb|ACN58843.1| ABC transporter permease protein [uncultured bacterium BLR12]
          Length = 264

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 115/238 (48%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S    +   +    ++    ++       ++RQ Y +G   +P++ L  F+ G V  +Q 
Sbjct: 19  SFFINVAQTLRFILDYFVQLFRPPYEFSEIVRQCYKIGCDSLPLISLTGFIIGVVFTKQS 78

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              LS+FGA  +   L+ I   + +  L+TA++ AG+ GS+I AE+G+MK+ E+I+A+  
Sbjct: 79  RPSLSEFGATSWLPSLIGIAVFKALAPLVTALICAGKVGSSIGAELGAMKVTEQIEAMDV 138

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
                 + L+  R+ A +  LP+L +  +  +++G+ + I     I  A F +       
Sbjct: 139 SASKPYKYLVFTRVTACLFMLPILMLFTSLVSLMGSYLDISSNEHISLATFITNAFDKIN 198

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             ++   LIKA      IG+VA  +GF     +  +GK     VV S+ ++ I + + 
Sbjct: 199 FLDLKASLIKALVFGFTIGMVACYKGFNTIRGTEGVGKAANAAVVTSMYLIFIEELII 256


>gi|259416059|ref|ZP_05739979.1| membrane protein [Silicibacter sp. TrichCH4B]
 gi|259347498|gb|EEW59275.1| membrane protein [Silicibacter sp. TrichCH4B]
          Length = 260

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 115/250 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              S  +   LG +        +   +   +       +  VG   +PVV L +  TG  
Sbjct: 11  GRTSLGRLAALGRITRFAASTFSHMLRPPFYPREFANALLQVGWLSLPVVALTAIFTGGA 70

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+I
Sbjct: 71  LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  + ++ L++PR+ A +I++P+L  + +   I+G  +V  +  D   A +    
Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +I + L+K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250

Query: 362 SLFAIFYFAI 371
            +    +F++
Sbjct: 251 FVLTGVFFSL 260


>gi|226943414|ref|YP_002798487.1| organic solvent tolerance ABC efflux transporter, permease
           [Azotobacter vinelandii DJ]
 gi|226718341|gb|ACO77512.1| organic solvent tolerance ABC efflux transporter, permease
           component [Azotobacter vinelandii DJ]
          Length = 265

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/251 (27%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +      LG                 G    L++Q++ +GV  +P++++     G 
Sbjct: 13  LGRAAIDVIEALGRSALFLMHATFGRSGAGGGFQLLVKQIHSIGVLSLPIIVVSGLFIGM 72

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG   L  +G+E     L+++  LRE+G ++T ++ AGR+GSA+ AEIG+MK  E+
Sbjct: 73  VLALQGYNILVSYGSEQAVGQLVALTLLRELGPVVTGLLFAGRAGSALTAEIGNMKSTEQ 132

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  +G+D ++ +I+PR+WA  +S+PLL  + N   I GA++V   +  +    F++ 
Sbjct: 133 LSSLEMIGVDPLKYIIAPRLWAGFLSMPLLAAIFNVVGIWGAAMVAVDWLGVYDGSFWAS 192

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             S+  L  ++  G IK+   A  +  +A+ +G+     S  +G+  T  VV +   V+ 
Sbjct: 193 MQSSVDLYDDVVNGAIKSIAFAFVVTWIAVFQGYDCEPTSEGIGRATTRTVVYASLAVLG 252

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 253 LDFILTALMFG 263


>gi|323140905|ref|ZP_08075818.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414643|gb|EFY05449.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 283

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 115/217 (52%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
             ++RQM  +G   +P+V++    TG V + Q A +  + GA      +++I   RE+  
Sbjct: 67  KEVVRQMALLGADSLPIVMMTILCTGMVFSVQTAKEFVRLGASSSVGGIVAIAMARELVP 126

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +LT V++AGR G+AI AE+G+MK+ E+IDA+R M  + V  L+ PR  AL++ +P+L + 
Sbjct: 127 VLTGVVVAGRIGAAIAAELGTMKVTEQIDALRVMAANPVSYLVVPRFIALVLMMPVLVVF 186

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
           ANF   IG  +V   Y  I    + +   + A   ++F G++K+      I IV   +G 
Sbjct: 187 ANFIGNIGGWVVAHYYAGIGSFTYENSIRTLAEFYDVFGGMVKSCVFGAIIAIVGCYKGL 246

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                +  +G   T  VV SI +V I +   +I  + 
Sbjct: 247 NAPNGAEGVGLATTASVVLSIILVFITNYFLSIVLYV 283


>gi|254512036|ref|ZP_05124103.1| membrane protein [Rhodobacteraceae bacterium KLH11]
 gi|221535747|gb|EEE38735.1| membrane protein [Rhodobacteraceae bacterium KLH11]
          Length = 260

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 111/252 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +      +     G V     +  +  ++   +       +  +G   +PVV L +  TG
Sbjct: 9   ELGRAILTMLAAFGRVALFALDAVSHIFRPPFYPREFGIALLNIGWLSLPVVGLTAIFTG 68

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E
Sbjct: 69  GALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTE 128

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+    ++ L +PR+ A +I++P+L  + +   I G   V  +      A +  
Sbjct: 129 QIDALVTLSTHPMKYLTAPRVLAALITVPVLVGVGDIIGIAGGYTVATQNLGFNPAAYLK 188

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  + +I + L+K         I+    G   G  +  +G+     V  +  +++ 
Sbjct: 189 NTVDFLEMRDIVSSLVKGAAFGVIAAIMGCYYGMNSGRGAQGVGRATKGSVEAAAVLILA 248

Query: 360 IDSLFAIFYFAI 371
            + +    +F++
Sbjct: 249 ANFVLTGVFFSL 260


>gi|227825164|ref|ZP_03989996.1| membrane protein [Acidaminococcus sp. D21]
 gi|226905663|gb|EEH91581.1| membrane protein [Acidaminococcus sp. D21]
          Length = 260

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 9/267 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
             K +  ++G + V     +    ++     +   +              ++RQM  +G 
Sbjct: 2   GLKTICAYLGHRAVYAFRATGRIMNLFFATCAALSKATP---------REVLRQMAKLGA 52

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             +P+V + S  TG V++ Q A +  +FGA      +++I   RE+  +L  V++AGR G
Sbjct: 53  DSLPIVSMTSMCTGMVLSVQTAKEFVRFGAADSVGGIVAIAMARELAPILAGVVVAGRIG 112

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +AI AEIG+MK+ E+IDA+R M     + L++PR  A+++ +P+L I AN    IG   V
Sbjct: 113 AAIAAEIGTMKVTEQIDALRVMATSPTQYLVAPRFLAIVLMMPILVIYANLVGDIGGGFV 172

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
              Y  I   +F           ++  GLIK       I ++   +G      +  +GK 
Sbjct: 173 AMNYAGIGSHMFIESIRGFVESWDLVGGLIKGSVFGAIIAVIGCHKGLNAQQGAEGVGKA 232

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
            T  VV SI ++ I +   ++  +  G
Sbjct: 233 TTASVVLSIILIFIFNYFLSVMLYVHG 259


>gi|18149137|dbj|BAB83590.1| toluene resistance protein Trg1 [Pseudomonas putida]
 gi|269200089|gb|ACZ28672.1| Ttg2B [Pseudomonas putida]
          Length = 265

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|300871878|ref|YP_003786751.1| ABC transporter permease-like protein [Brachyspira pilosicoli
           95/1000]
 gi|300689579|gb|ADK32250.1| ABC-type transport system permease protein-like protein
           [Brachyspira pilosicoli 95/1000]
          Length = 268

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 2/251 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG   S   +    +++       L  Q+  +GV    V  +    TG V++ 
Sbjct: 18  IIILLDTLGEFASLLIQIFKYTFRPSFSFKLLTDQIVRMGVESFIVAAVTVLCTGMVMSL 77

Query: 185 QGAFQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           Q A  L     G   F   ++    ++E+  +L A++ AGR GS++ AEIG+M+++E++D
Sbjct: 78  QIAVVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLD 137

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++T+  + +  +  PR WA +ISLP+LT+ A+   ++G ++V     +   A++F R  
Sbjct: 138 ALKTLYTNPIEYVAVPRFWAAVISLPMLTVSADIIGVLGGAVVTVFVLNNDPAIYFDRAI 197

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +  +L +    LIK+      + +++   GF     +  +GK  T  VV S  +++I D 
Sbjct: 198 AVISLGDFIGSLIKSTIFGAEVILISCFYGFRTNGGAEGVGKATTISVVYSFMLILITDY 257

Query: 363 LFAIFYFAIGI 373
           L        G+
Sbjct: 258 LLVSILGMFGM 268


>gi|148546241|ref|YP_001266343.1| hypothetical protein Pput_0998 [Pseudomonas putida F1]
 gi|148510299|gb|ABQ77159.1| protein of unknown function DUF140 [Pseudomonas putida F1]
          Length = 265

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|284929638|ref|YP_003422160.1| hypothetical protein UCYN_11070 [cyanobacterium UCYN-A]
 gi|284810082|gb|ADB95779.1| conserved hypothetical integral membrane protein [cyanobacterium
           UCYN-A]
          Length = 263

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 114/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      K K    + + QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LVAAILLGGQVFFHILKTKIHKRNTLEQMSVVGPESLTISMITAAFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E++DA+  +  D 
Sbjct: 78  SFGAVSTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQVDALYMLKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+L IL+  + + G  ++    YDI   VF +   +     ++ 
Sbjct: 138 ISYLVVPRVLACCLMLPILNILSLITGMAGGLLIANGLYDISVYVFLTSVRNFLEFWDLI 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           T  IKA      I ++    G      +  +G+  TT VV S+  V II+   +   F 
Sbjct: 198 TSTIKAITFGGLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTSLLAVFIINFFLSWIMFQ 256


>gi|153004838|ref|YP_001379163.1| hypothetical protein Anae109_1976 [Anaeromyxobacter sp. Fw109-5]
 gi|152028411|gb|ABS26179.1| protein of unknown function DUF140 [Anaeromyxobacter sp. Fw109-5]
          Length = 250

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 116/243 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    LG ++   GE    + +    L  ++ QM ++GV    +V +     G V A 
Sbjct: 4   LKAGLEDLGRMLMFAGEMVGWAVRPPFRLELVLAQMAFIGVGSAFIVGVTGTFAGMVFAL 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  F + QF AE +    ++    RE+  + TA+M+ GRSGSAI  E+G+M++ E+IDA+
Sbjct: 64  QMNFAMKQFAAEGYVGGSVAFSLARELSPVFTALMVTGRSGSAIATELGTMRVTEQIDAM 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            +M ++ ++ L+ PR+ A +I  P LT+L N     G  ++      IP   + +     
Sbjct: 124 ESMAVNPIQYLVVPRVIASLIMFPFLTMLFNSLGYAGGFVMGVYVAGIPIGPYLAHTQEF 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +I  GL KA      + ++    G+A    +  +G+  T  VV S   +++ D + 
Sbjct: 184 MDVGDILHGLFKAVVFGLIVSVITTWRGYAAFGGAKGVGEGTTRGVVASSITILLADYVI 243

Query: 365 AIF 367
              
Sbjct: 244 TFI 246


>gi|298490672|ref|YP_003720849.1| hypothetical protein Aazo_1524 ['Nostoc azollae' 0708]
 gi|298232590|gb|ADI63726.1| protein of unknown function DUF140 ['Nostoc azollae' 0708]
          Length = 261

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+      + K +   ++      G + +P V+L+S   G +   Q A +L +FG
Sbjct: 22  TVLLFGQISLHILQGKTYYGKVLEHTVTAGPASLPPVLLVSGFAGMIFTIQTARELVRFG 81

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A        ++   RE+  +LTA +IAG+ GSA  AEIG+M++ E+IDA+  +  D +  
Sbjct: 82  AVENVGGAFALAFCRELAPILTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDY 141

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  + +PL+ ILA    I G +     +Y +    F        T +++F  L
Sbjct: 142 LVLPRVIACCLMMPLMMILAVIMGITGGAFAASYFYQVQPETFLESVRDFLTPSDVFIIL 201

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K       + +     G      +  +G+  TT VV +   + I+D + A+  F 
Sbjct: 202 LKGLIFGLIVAVNGCSWGLTTKGGAKEVGESATTAVVTTWVAIFIMDFILALILFE 257


>gi|284036726|ref|YP_003386656.1| hypothetical protein Slin_1812 [Spirosoma linguale DSM 74]
 gi|283816019|gb|ADB37857.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74]
          Length = 271

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 115/237 (48%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L  V S  G F   +         ++RQ Y VG   + ++    F+TG V 
Sbjct: 20  RRLDRFLLGLADVSSFIGRFFREALLPPYEFKEIVRQCYEVGFRSLLLISTTGFITGIVF 79

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q    LS+FGA  +   L++I  +R +G L+TA++ AG+ GS+I AE+GSM + E+ID
Sbjct: 80  TNQSRPSLSEFGATSWLPSLIAIAIVRALGPLVTALIAAGKVGSSIGAELGSMNVTEQID 139

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+   G D  + L+  R+ A   ++PLLT+   F  +IGA I + +     F  F     
Sbjct: 140 AMEVSGTDPFKFLVVTRVLATSFTIPLLTMYTIFVGLIGAYINVNQNEQTSFTSFMQEVF 199

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              T  +IF  ++K+      IG+V   +G+     +  +GK   + VV S+ +V I
Sbjct: 200 GAITYLDIFASVLKSIVFGFTIGMVGCYKGYHSSKGTEGVGKAANSAVVTSMFLVFI 256


>gi|26987695|ref|NP_743120.1| hypothetical protein PP_0959 [Pseudomonas putida KT2440]
 gi|24982381|gb|AAN66584.1|AE016286_8 toluene tolerance ABC efflux transporter, permease [Pseudomonas
           putida KT2440]
          Length = 266

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 9   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 68

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 69  VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 128

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 129 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 188

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 189 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 248

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 249 LAVLGLDFILTALMFG 264


>gi|281356107|ref|ZP_06242600.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317476|gb|EFB01497.1| protein of unknown function DUF140 [Victivallis vadensis ATCC
           BAA-548]
          Length = 263

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 3/244 (1%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G V S          + +  L   +  +   G   +P+V+LI F+ G V+A  G  
Sbjct: 22  VVFIGRVASAL-PLLRQKRQLR--LKETLYYLDLCGAQSLPLVLLICFLMGGVLAINGQI 78

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QLS+FG+EIF +D++    L+E G L+ A++  G++GSA  +EIG+MK++EEI A+ T+G
Sbjct: 79  QLSKFGSEIFIVDMVGFSVLKEFGPLMVALIATGQAGSAFASEIGTMKVDEEISALETLG 138

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +     L+ P++ A++I+LPLLT+  +F+ + G   V      +P A +  R        
Sbjct: 139 IRPAAYLVLPKLIAMLIALPLLTVFGDFAGLTGGLAVGITVAGLPLAAYVERTLDILDST 198

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
               G++K+   A  I +     GF     +  +G+  T  VV SI  V++  +L  + Y
Sbjct: 199 TFLLGVLKSFVFAVLITLAGCYCGFRSSGDAQGVGRAATAAVVISILFVVVATALLTVLY 258

Query: 369 FAIG 372
             IG
Sbjct: 259 SFIG 262


>gi|94986675|ref|YP_594608.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94730924|emb|CAJ54287.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 266

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 5/255 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + ++     + S    LG +     E     +         IRQ+Y +G   + V+ LI 
Sbjct: 7   QLVILLGQWTISICITLGEIFLFLLEGFRQIFITPKLCSKAIRQIYVIGTKSLFVISLIG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  QG + L +FG+  F    +S+  +RE+G +LTA+MI  R+GS++ AEIG M
Sbjct: 67  LFTGMVLGLQGYYVLIKFGSVGFLGSAVSLTLIRELGPVLTAIMIIARAGSSMTAEIGVM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I ++IDA+  M +  +  L+SPRI A +IS PLLT + +   IIG  +       +   
Sbjct: 127 RITDQIDALEVMDIPGIGYLVSPRIVASLISFPLLTAVFDVIGIIGGYLTGVCLLGVNEG 186

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCV 350
            +FS   S+ TL++I  G IKA   A  + ++   +G+       G    ++    T+ V
Sbjct: 187 AYFSSIESSTTLSDINEGSIKALTFAILVILICCYKGYNAHRRRDGRGPEAVANATTSAV 246

Query: 351 VQSISIVIIIDSLFA 365
           V S  +V+I D +  
Sbjct: 247 VVSCVLVLIADYVVT 261


>gi|17231507|ref|NP_488055.1| hypothetical protein alr4015 [Nostoc sp. PCC 7120]
 gi|17133150|dbj|BAB75714.1| alr4015 [Nostoc sp. PCC 7120]
          Length = 263

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 7/258 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K  +   +     A  LG      G+      + K    +   QM  VG   + + +L +
Sbjct: 5   KSSIGTWSQRLLAAIFLG------GQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTA 58

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAV   Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M
Sbjct: 59  VFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTM 118

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  + ++G  I+    Y I   
Sbjct: 119 RVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTGMLGGLIIATNMYGISDT 178

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           VF     +   + +I + +IKA      I I+    G      +  +G+  TT VV ++ 
Sbjct: 179 VFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALL 238

Query: 356 IVIIIDSLFA-IFYFAIG 372
           I+ + +   + + +   G
Sbjct: 239 IIFVSNFFLSWVMFQGTG 256


>gi|238899004|ref|YP_002924686.1| putative ABC transporter, permease protein [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229466764|gb|ACQ68538.1| putative ABC transporter, permease protein [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 261

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 123/255 (48%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +             LG              + +  L  LI+Q+Y VGV  + ++++  
Sbjct: 5   ESVSSLGRKGIDACSTLGRAGCMLLNIVFGKPEPRKNLPILIKQLYRVGVQSILIIVISG 64

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++   RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 65  LFIGMVLGLQGYLTLTTYGAEGSLGMLVALSLFRELGPVVSALLFAGRAGSALTAEIGLM 124

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA +ISLPLL  L     I G+S+V   +  I   
Sbjct: 125 KATEQLSSLEMMAIDPLRRVIAPRFWAGVISLPLLAALFISVGIFGSSMVAIDWKGIDAG 184

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F+S  H +   +++     K+   A  I  +++  G+     S  +    T  VV S  
Sbjct: 185 FFWSAMHDSVMPSDVINCFFKSVSFAVIITWISVFNGYDATPTSEGISLATTRTVVNSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L  +  F 
Sbjct: 245 AVLAVDFLLTVLMFG 259


>gi|4336799|gb|AAD17958.1| toluene tolerance protein Ttg2B [Pseudomonas putida]
          Length = 265

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + ++++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALIGRGGIGGGFQLLTKQLYSVGVLSLAIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GLIK+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|58040555|ref|YP_192519.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
 gi|58002969|gb|AAW61863.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
          Length = 387

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 81/369 (21%), Positives = 151/369 (40%), Gaps = 15/369 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G W++   +           K           S +   DT     +       H 
Sbjct: 31  VMVLSGTWQAR--AGNIPVFPKDGLKKAPGAHLSFQTSDLQVWDTGLVAFLWDLKRVAHD 88

Query: 68  KI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
                 +Q +   + QL  L+     + + ++  +              +G   +  + +
Sbjct: 89  AGISLDMQTLPGPMRQLLELLPEVPDEPVHHKTARTP--------FLETVGNHAIASMTE 140

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
               + +  L             + +     L+      G   + +V +++F+ GA++A 
Sbjct: 141 VGVVSELGALTAKGAVLTLLGRSRMRMV--DLLANTADAGPYALLIVGIVNFLIGAILAF 198

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            GA +L +F A I+   L+ I  +RE+  ++TA+++AGR+G A  A I +M+ NEEIDA+
Sbjct: 199 VGAVELQKFAAGIYVASLVGIAMVREMAAVMTAIIMAGRTGGAYAARISTMQGNEEIDAL 258

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
              G+     LI P + +LII++P L +      ++G  +V     DI  A +F +  + 
Sbjct: 259 NVFGIPTSTYLILPAVLSLIITMPFLYLYGCLIGMLGGFVVAISMLDITAAGYFHQTVTA 318

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +     G  K+      IG+ + + G   G  +  +G   T  VV  I  VI ID++F
Sbjct: 319 FGIGQFIFGFTKSLVFGAFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVIAIDAIF 378

Query: 365 AIFYFAIGI 373
           A+    +GI
Sbjct: 379 AVIADVLGI 387


>gi|256420257|ref|YP_003120910.1| hypothetical protein Cpin_1211 [Chitinophaga pinensis DSM 2588]
 gi|256035165|gb|ACU58709.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 247

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H  G  +       +     + F    +RQ   +G+  + +V++IS   G V   Q A
Sbjct: 5   FFHHFGSYLLMLKGMFSRPENMRMFWKEFMRQCVDIGIGSLGIVLIISMFMGGVTTLQIA 64

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           +QL S    +     ++    + E    LT +++AG  GS I +E+G+M+++E+IDA   
Sbjct: 65  YQLISPVIPKSTIAQIVRDTIILEFAPTLTCIVLAGVVGSKIASELGNMRVSEQIDAQEI 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A II +P L  +A F  I G          +    ++        
Sbjct: 125 MGINTKGYLIMPKILAAIIMIPCLIAIAGFLGIWGGQKAGELGGILSAEQYWQGLRQDFR 184

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             NIF  L KA   A  I  V    G+ V   +  +GK  T+ VV +  +++ +D L A 
Sbjct: 185 AYNIFFALFKAFVFAFIIASVPSYYGYNVQGGALEIGKASTSAVVVTCVLILFMDYLLAA 244

Query: 367 FYF 369
              
Sbjct: 245 LLL 247


>gi|145297399|ref|YP_001140240.1| ABC-type transporter, permease subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850171|gb|ABO88492.1| ABC-type transporter, permease subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 259

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + K           +G          A   + +     L++Q+Y VGV  V ++++    
Sbjct: 6   VSKLGRVGVRVISSIGRATIMLFHALAGKPEPRKHFPLLLQQLYVVGVQSVAIILVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     L+S+  LRE+G ++T ++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTGLLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +++PR WA +IS+PLL  + +   I G  +V      +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDLLGVDEGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I  G IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 186 WSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFILTAVMFG 259


>gi|313497328|gb|ADR58694.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 265

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++      +     +LG                 G    L +Q+Y VGV  + +V++  
Sbjct: 8   ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGYSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++ +   ++  GL+K+   A     +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|163749276|ref|ZP_02156525.1| hypothetical protein KT99_08438 [Shewanella benthica KT99]
 gi|161330995|gb|EDQ01921.1| hypothetical protein KT99_08438 [Shewanella benthica KT99]
          Length = 260

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 2/258 (0%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           + + +        +    LG          A   + KG L   ++Q+Y VGV  + ++++
Sbjct: 3   MAESLANLGRGGIALVTGLGKAGIMLWGAIAHKPRLKG-LPLFVKQLYVVGVQSMVLILI 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG
Sbjct: 62  SGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E++ ++  M +D +R +I+PR WA ++SLPLLT++     I G  IV  ++  I 
Sbjct: 122 LMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAIGIYGGYIVGVEWKGID 181

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              F+S   ++     +I   LIK+      +  +A+  G+ V  +   + K  T  VVQ
Sbjct: 182 GGSFWSILQASVEWREDIVNCLIKSFLFGIVVTWIALYRGYQVVPNPEGISKATTQTVVQ 241

Query: 353 SISIVIIIDSLFAIFYFA 370
           S   V+ +D L     F 
Sbjct: 242 SSLAVLALDFLLTAIMFG 259


>gi|313682719|ref|YP_004060457.1| hypothetical protein Sulku_1596 [Sulfuricurvum kujiense DSM 16994]
 gi|313155579|gb|ADR34257.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM
           16994]
          Length = 264

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 110/246 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 GL I    +              ++ Q+  +G+  + V+ L +  TG V A Q 
Sbjct: 18  EAIERFGLFILFQLQLFKLYPLTFKRYKIVLTQIEVIGLGCMGVITLTALFTGMVEAIQL 77

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                QFGAE F+   +     RE+G +  ++M+  RS SA+ AE+G+M+++E+IDAI  
Sbjct: 78  YNGFHQFGAENFTGYTIFYSISRELGPVFASLMLISRSISAMAAELGTMRVSEQIDAIDI 137

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++    LI+PRI A +ISLPLL I  +F A+  A  +      I    +         
Sbjct: 138 LGVNSKEYLITPRIIATVISLPLLVIWFDFIAVGSAYFISIGVLGINPVAYQDTLMRLGE 197

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +I TG+IKA      +  +    G+     +  +G+     VV S   + + +   + 
Sbjct: 198 FEDIMTGVIKAAVFGFIVSSIGSYIGYHTSGGARGVGQSTIYAVVYSAVAIFVTNYFLSA 257

Query: 367 FYFAIG 372
            +  + 
Sbjct: 258 LFLYLD 263


>gi|91791861|ref|YP_561512.1| hypothetical protein Sden_0497 [Shewanella denitrificans OS217]
 gi|91713863|gb|ABE53789.1| protein of unknown function DUF140 [Shewanella denitrificans OS217]
          Length = 265

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               + +     G                +     L++Q+Y +GV  + ++I+     G 
Sbjct: 14  VGQSAIAFMRGFGKAGLMLWGALFHIPNVRKGGPLLLKQIYVLGVRSMIIIIVSGLFIGM 73

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 74  VMALQGYNVLVGFGTEESLGPMVALSLLREMGPVVTALLFAGRAGSALTAEIGLMKSTEQ 133

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D +R +I+PR WA +IS+PLL ++ +   I G  +V  ++  I    F+S 
Sbjct: 134 LSSLEMMAIDPLRQVIAPRFWAGVISMPLLAVMFSLVGIYGGHLVGVEWKGIDSGTFWSI 193

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++     +I   LIK+   A  +  +A+  G+ V  +   + +  T+ VVQ+   V+ 
Sbjct: 194 LQASIEWRQDIVNCLIKSTVFAVVVTWIALYRGYEVNPNPEGISRATTSTVVQASLAVLG 253

Query: 360 IDSLFAIFYFA 370
           +D L     F 
Sbjct: 254 LDFLLTAIMFG 264


>gi|149190595|ref|ZP_01868864.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
 gi|148835593|gb|EDL52561.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
          Length = 262

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I K    + S     G           S  + K     LI+Q++ VGV  + ++++   
Sbjct: 7   WIQKVGQRTLSLCQSWGRATFMLFGVLFSKPQPKKHFPLLIKQLHNVGVQSLAIIMVSGL 66

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 67  FIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 126

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D ++ +ISPR WA +IS+PLL ++     I G  +V   +  I    
Sbjct: 127 ATEQLSSMEMMAVDPLKRVISPRFWAGVISMPLLAMIFMAIGIWGGQLVGVDWKGIDHGS 186

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 187 FWSAMQSSVELGRDIGNSVIKCLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHSSL 246

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 247 AVLGLDFVLTALMFG 261


>gi|307153262|ref|YP_003888646.1| hypothetical protein Cyan7822_3422 [Cyanothece sp. PCC 7822]
 gi|306983490|gb|ADN15371.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822]
          Length = 264

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 1/242 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      K+K    + + QM  VG   + + ++ +   G V   Q + +  
Sbjct: 18  LSAAILLGGQVFFHLLKYKIHRRNTLDQMAIVGPESLTISLVTAAFVGMVFTIQVSREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA  +   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  YFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALHMLKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LT+LA  + I G   +    Y+I  AVF +   +     ++ 
Sbjct: 138 IDYLVIPRVLACSLMLPILTVLALLTGIAGGIAIADSLYNISPAVFLNSARNFLQTWDLV 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370
           + ++K+      I ++    G      +  +G+  TT VV ++  + + +   + + +  
Sbjct: 198 SCILKSAVFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVTNFFLSWLMFQG 257

Query: 371 IG 372
            G
Sbjct: 258 TG 259


>gi|301167973|emb|CBW27559.1| putative membrane protein [Bacteriovorax marinus SJ]
          Length = 292

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 121/256 (47%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +    + +      LG +     +F    +K          Q Y++G   + ++ L  
Sbjct: 36  KFVEAIGSMTMENVQGLGSICRFIFKFFYWVFKPPYRFKLFAEQFYFIGNKSLFIITLAG 95

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+A Q  F       +     +++I   +E+  +L+ +++AGR+G+A+ A+IG+M
Sbjct: 96  SFTGMVMAYQTYFGFKLINVDSLVGSVVAISLAKELAPVLSGLIVAGRAGAAMAAQIGTM 155

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E++DA+  MG+D  + L  PRI A  +SLP+L+I+  F   +G+ IV      I   
Sbjct: 156 KVTEQVDALEVMGIDSYQYLAVPRILAATLSLPMLSIVFLFVGNVGSYIVGTVALLIDET 215

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++ S+      + +I  G+IKA      I ++    GF V   +  +GK     VV  + 
Sbjct: 216 MYLSKLGDFMFVGDIVQGIIKATVFGFVIAVIGTYFGFNVTKGAEGVGKGTNLAVVWGMI 275

Query: 356 IVIIIDSLFAIFYFAI 371
            V+++D     F   +
Sbjct: 276 SVLVLDYFLTSFLVQV 291


>gi|196228069|ref|ZP_03126936.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196227472|gb|EDY21975.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 260

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 118/254 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + S    LG + +   E C S          ++RQ+  VG     VV++    
Sbjct: 2   VTTIGRIALSLLQYLGELATLVSETCVSLVVAPIRWRLVLRQIVEVGWRSQMVVVVTGGF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGAV+A Q  FQ S+ G +     ++++   RE+  +LT +M++GR G+AI AEIG+MK+
Sbjct: 62  TGAVLAAQAYFQFSRLGMKSAVGSMVAVSMFRELAPVLTGLMVSGRVGAAIAAEIGTMKV 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R++G+     L+ PR+ AL+ S+PLL       +++   ++     DI  A +
Sbjct: 122 TEQIDALRSLGVHPTDYLVVPRVLALLFSMPLLVAECCAVSVLAGYVLGVHVLDISAAYY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  A   ++   L K       I  +A  +G      +  +G+  T  VV     V
Sbjct: 182 VRNMLLYAGPRDLKMALTKGLVFGIVIVFIACHQGLKTSNGAVGVGRAPTEAVVNGSLAV 241

Query: 358 IIIDSLFAIFYFAI 371
           +I++         +
Sbjct: 242 LILNFFLTFALNMV 255


>gi|330827998|ref|YP_004390950.1| ABC transporter permease [Aeromonas veronii B565]
 gi|328803134|gb|AEB48333.1| ABC-type transporter, permease subunit [Aeromonas veronii B565]
          Length = 259

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 124/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I K           +G          A   + +     LI+Q+Y VGV  V ++++    
Sbjct: 6   ISKLGRVGVRFISSVGRATIMLFHALAGKPEPRKHFPLLIQQLYVVGVQSVAIILVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +++PR WA +IS+PLL  + +   I G  +V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGGF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I  G IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 186 WSAMQASVDWHEDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFILTAVMFG 259


>gi|52425767|ref|YP_088904.1| hypothetical protein MS1712 [Mannheimia succiniciproducens MBEL55E]
 gi|52307819|gb|AAU38319.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 260

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 128/255 (50%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I     +  +    LG              + K     LI+Q+Y +GV  + +++L  F 
Sbjct: 6   ISALGRNVINSVKALGRAGFMLFGSLVGKPQIKKHFPLLIKQLYVLGVQSLLIILLSGFF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVILVDFAAEANVGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +I++P+LT+L     IIG  ++  ++  I    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPVLTVLFTAVGIIGGHLIGVEWKGIDSGSF 185

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +S   +     +++ G IK+   A  +  +A+  G+     S  + +  T  VV +  +V
Sbjct: 186 WSVMQNAVRTLDLWDGFIKSLVFAFTVTWIALFNGYDCIPTSEGISQATTRTVVNASLLV 245

Query: 358 IIIDSLFAIFYFAIG 372
           + +D +     F  G
Sbjct: 246 LGLDFVLTAIMFGAG 260


>gi|83945272|ref|ZP_00957621.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
 gi|83851442|gb|EAP89298.1| ABC transporter, permease protein, putative [Oceanicaulis
           alexandrii HTCC2633]
          Length = 255

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 122/250 (48%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
                   +     G V    G+  A+  +   F   L++Q++ +G   +PVV L +  T
Sbjct: 5   RAIGAGLLALLRSAGAVALFAGQALAALVRPPYFGGQLVQQIFKIGFLSLPVVGLTALFT 64

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA +A       S+F AE F  +++++  +RE+G ++ A+M+AGR  S I AEIG+M+  
Sbjct: 65  GAALALNIYTGGSRFNAESFVPNIVAMGIVRELGPVIAALMLAGRVSSGIAAEIGAMRAT 124

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E+IDA+ T+  D +R LI+PR+ A ++ LP+L   A+   I G  +V     D    ++ 
Sbjct: 125 EQIDALHTLATDPMRYLIAPRVLAGVLVLPILVATADIIGIYGGYLVSVHTLDFNPTIYV 184

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                  +  +I +GLIKA      + ++    G+     +  +G+  T  VV +  ++ 
Sbjct: 185 RNTWDFLSDWDIISGLIKAAVFGFILTLMGCYHGYYAQGGAQGVGRAATNAVVAAAVLIF 244

Query: 359 IIDSLFAIFY 368
             + L    +
Sbjct: 245 AANFLLTSLF 254


>gi|99081621|ref|YP_613775.1| hypothetical protein TM1040_1780 [Ruegeria sp. TM1040]
 gi|99037901|gb|ABF64513.1| protein of unknown function DUF140 [Ruegeria sp. TM1040]
          Length = 260

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 116/250 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              S  +   LG +        +   +   +   L   +  VG   +PVV L +  TG  
Sbjct: 11  GRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVVALTAIFTGGA 70

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +M++ E+I
Sbjct: 71  LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMRVTEQI 130

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  + ++ L++PR+ A ++++P+L  + +   I+G  +V  +  D   A +    
Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                L +I + L+K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250

Query: 362 SLFAIFYFAI 371
            +    +F++
Sbjct: 251 FVLTGVFFSL 260


>gi|114564530|ref|YP_752044.1| hypothetical protein Sfri_3369 [Shewanella frigidimarina NCIMB 400]
 gi|114335823|gb|ABI73205.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 261

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +       G              + K     LI+Q+Y +GV  + ++++    
Sbjct: 7   IADIGKYALKIVLGYGRAGIMLWRAIVHVPRIKKGTPLLIKQVYVLGVRSMVIILVSGLF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L +FG E     ++++  LRE+G ++ A++ AGR+GSA+ AEIG MK 
Sbjct: 67  IGMVLALQGYNILVEFGTEESLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKS 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   I+G  +V  ++  I    F
Sbjct: 127 TEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFSLVGILGGHLVGVEWKGIDSGAF 186

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I   LIK+      +  +A+  G+ V  +   + +  T+ VVQ+   
Sbjct: 187 WSILRASVEWREDIVNCLIKSVIFGVVVTWIALYRGYEVQPNPEGISRATTSTVVQASLA 246

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F 
Sbjct: 247 VLALDFLLTAIMFG 260


>gi|83309431|ref|YP_419695.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
 gi|82944272|dbj|BAE49136.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
          Length = 271

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
              F      +G++ V  I +    A +LG  +   G       +    L  ++ Q   +
Sbjct: 7   PRGFIGFLDRLGRRAVAGIVEFGFGASLLGESLYWLGM--GGKRRQPVRLAPVVAQAMEI 64

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G+  +P+V ++S   G ++A QG + L  FGAE      +++  +RE G L+T +++AGR
Sbjct: 65  GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA+ A +G+M+IN+EIDA+  MG+  VR L+ P + A++  LP LT+ ++   +  A 
Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMAMLPALTLWSDLVGLFAAG 184

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           + I          +         L +I+ GL K+   +  I +V +  G +V   +  +G
Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDIWHGLGKSAIFSVLITVVGVVNGASVTGGAEGVG 244

Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367
           +  T  VV +IS ++I D +F   
Sbjct: 245 RMTTRSVVHAISAIVITDMIFVFM 268


>gi|303246386|ref|ZP_07332665.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302492096|gb|EFL51971.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 268

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 5/254 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               + S    LG       +           +  +++Q+Y++GV  + V++LI   TG 
Sbjct: 15  LGRTALSILSELGGFFIFLCQGLWRILVPFPSVPKIVQQVYFIGVKSIFVIVLIGLFTGM 74

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG + L +FG+E      +++  +RE+G +LTA+M+ GR+GS+I AEIG M+I+E+
Sbjct: 75  VLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMLTGRAGSSIAAEIGIMRISEQ 134

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ TMG++ +R LI+PR+ A +I  PLLT + +   I G  +       I   V+F R
Sbjct: 135 IDALTTMGINPMRFLIAPRLAASLICFPLLTAIFDVVGIGGGYLTGVVLLGINPGVYFDR 194

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355
             +   LA++  G  K+   A  +  +   EG+       G  +  +    T+ VV S  
Sbjct: 195 IDAAVELADVTGGFEKSIVFALLVAAICCYEGYFTHTRREGFGAKGVSLATTSAVVVSCV 254

Query: 356 IVIIIDSLFAIFYF 369
            V++ D +   F  
Sbjct: 255 TVLVADYVLTSFLL 268


>gi|260772164|ref|ZP_05881081.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           metschnikovii CIP 69.14]
 gi|260613031|gb|EEX38233.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           metschnikovii CIP 69.14]
          Length = 263

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I +F           G              +    L  L++Q+Y VGV  + ++I+  
Sbjct: 7   QAISRFGRRCLGVGESFGRASLMLFGALVGRPRPIQHLPLLMKQLYSVGVQSLAIIIVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGHLVGVDWKGIDQG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSVMQSSVELGRDIGNSVIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLALDFVLTALMFG 262


>gi|149918249|ref|ZP_01906741.1| putative ABC transporter, permease protein [Plesiocystis pacifica
           SIR-1]
 gi|149821009|gb|EDM80416.1| putative ABC transporter, permease protein [Plesiocystis pacifica
           SIR-1]
          Length = 273

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 7/278 (2%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
             +           ++    +G  I + I      A + G  +       A   +    L
Sbjct: 3   DPKSDAPPAKKPGIRDWAEGVGANINETIRWCGGMAVMFGQAM-------ARGPRRPWGL 55

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
             +  Q+  +G+  +PV  ++S   G ++A Q    L+ FGA      + S+  +RE+  
Sbjct: 56  FDISYQILQLGIRSIPVTTMMSIFVGMILAWQFGEALADFGATNSIGYVTSLALVRELVP 115

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
            L AV +  +  + + AE+GSMK+ E+IDAI  +G D ++ L+ PR+ A  +++PLL   
Sbjct: 116 TLLAVTVGTKMATGMTAELGSMKVTEQIDAIAALGADPIKKLVWPRLVAACVAMPLLVAW 175

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            N  A++G  ++    +DIP   F++ +       +      KA       GI+   +GF
Sbjct: 176 GNVIAMLGGMLISEAVFDIPAGYFYNSYIDELEPIHYVMSQTKALVFGALAGIIGCYQGF 235

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +    + ++G+  T  V+    +V+I D      +  I
Sbjct: 236 STKFGTEAVGQSTTETVIAVSVLVLIADFALTALFIPI 273


>gi|27364141|ref|NP_759669.1| ABC transporter permease YrbE [Vibrio vulnificus CMCP6]
 gi|320157526|ref|YP_004189905.1| ABC transporter permease YrbE [Vibrio vulnificus MO6-24/O]
 gi|27360259|gb|AAO09196.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio
           vulnificus CMCP6]
 gi|319932838|gb|ADV87702.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           vulnificus MO6-24/O]
          Length = 262

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I        S     G          A   + +  L  L++Q+Y VGV  + ++++    
Sbjct: 8   ISALGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR+WA IIS+PLL ++     I G  +V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 187

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 188 WSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|75907908|ref|YP_322204.1| hypothetical protein Ava_1687 [Anabaena variabilis ATCC 29413]
 gi|75701633|gb|ABA21309.1| Protein of unknown function DUF140 [Anabaena variabilis ATCC 29413]
          Length = 263

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 7/258 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K  +   +     A  LG      G+      + K    +   QM  VG   + + +L +
Sbjct: 5   KSSLGTWSQRLLAAIFLG------GQAIVHLLRGKIHWRNTREQMAAVGPDSLFIALLTA 58

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAV   Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M
Sbjct: 59  VFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTM 118

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  + I+G  I+    Y I   
Sbjct: 119 RVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTGILGGLIIATNMYGISDT 178

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           VF     +   + +I + +IKA      I I+    G      +  +G+  TT VV ++ 
Sbjct: 179 VFLDSARNLLEVWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALL 238

Query: 356 IVIIIDSLFA-IFYFAIG 372
           I+ + +   + + +   G
Sbjct: 239 IIFVSNFFLSWVMFQGTG 256


>gi|312959004|ref|ZP_07773523.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens WH6]
 gi|311286774|gb|EFQ65336.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens WH6]
          Length = 265

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +K+  F         +LG                 G    LI+Q++ VGV  + ++++  
Sbjct: 8   EKVRLFGRSGIDMVEVLGRSTIFLFHALLGRGGIGGGFGLLIKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSGYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++    ++ T   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWGNMQNSVTFNGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|119510442|ref|ZP_01629575.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414]
 gi|119464864|gb|EAW45768.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414]
          Length = 265

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 6/255 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K  +   +     A  LG      G+      + K    + + QM  VG   + + +L +
Sbjct: 7   KSSLGAWSQRLLAAIFLG------GQVIVHLLRGKINWRNTVEQMAAVGPGSLFIALLTA 60

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAV   Q A +   FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M
Sbjct: 61  VFVGAVFTIQVAREFINFGAANLVGGVLAVALTRELSPVLTAVVLAGRVGSAFAAEIGTM 120

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+  +  D +  L+ PR+ A  + LP+LT+L+  + I+G  I+    Y I   
Sbjct: 121 RVTEQIDALFILKTDPIDYLVIPRLLACCLMLPILTLLSLITGILGGLIIATSIYGIADT 180

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           VF     +   + +I + LIKA      I ++    G      +  +G+  TT VV S+ 
Sbjct: 181 VFLDSARNLVGIWDIISALIKACCFGLLIAVIGCSWGLTTKGGAKGVGQSTTTAVVTSLL 240

Query: 356 IVIIIDSLFAIFYFA 370
           I+   +   +   F 
Sbjct: 241 IIFTSNFFLSWLMFQ 255


>gi|114798102|ref|YP_759452.1| hypothetical protein HNE_0724 [Hyphomonas neptunium ATCC 15444]
 gi|114738276|gb|ABI76401.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
          Length = 261

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 126/252 (50%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +      +G +    G    +++  + +   ++RQ+  +G   +PVV L +   GA 
Sbjct: 10  GRATLGLFGEVGRLAVFAGRVKGAAFTPRWYGGEILRQIVRIGFYSLPVVGLAAVFIGAA 69

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A       S++GAE F   ++ +   RE+GV++T +M+AGR  + I AEIG+M++ E+I
Sbjct: 70  LALNIYEGGSRYGAEQFVPSIVVLGITRELGVVITGLMLAGRVSAGIAAEIGAMRVTEQI 129

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+     R L +PR  A +I+LP+L  LA+   ++G  +V     D    V+    
Sbjct: 130 DALETLSASRYRYLYAPRFIAALITLPMLVALADIIGVMGGWLVSVYGLDFDSTVYLRNT 189

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               TL +IF GLIKA      I I+   +G      +  +G+  T  +V +  +++  +
Sbjct: 190 LDFLTLNDIFAGLIKAVVFGGVIAIMGCYQGDRSQAGATGVGRAATLSMVGAAVLILAFN 249

Query: 362 SLFAIFYFAIGI 373
            + +  +  IG+
Sbjct: 250 YVMSTVFVEIGL 261


>gi|303246825|ref|ZP_07333102.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
 gi|302491842|gb|EFL51722.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans
           JJ]
          Length = 254

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAV 181
            ++ +   ++  ++           + K +L S     M ++G   +P++ +IS   G +
Sbjct: 4   GEAATLVWLVSGLMRCARGTVNPLRRTKTYLRSRTWSHMAWIGADSLPIISIISACVGII 63

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q A QL + GA  +  +L+    + E+G LLT +++AGR+G+A  AEI +M+I+EEI
Sbjct: 64  LALQSATQLEKVGAMSYVANLVGYSIITELGPLLTCLILAGRAGAAFTAEIATMRISEEI 123

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+D VR L+ P+  A+ +  PLLT+  +   I    I       +    +F + 
Sbjct: 124 DALEVMGVDPVRFLVWPKFAAMCVMAPLLTLWGDCIGISAGGIFSALALGLSGKAYFLQT 183

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               T+ ++ +GL+K+      I I++  +GF     +  +G++ T  VVQSI ++I++D
Sbjct: 184 AGFLTMRDLLSGLVKSAGFGVTITIISCWQGFLAREGAADVGRRTTRAVVQSIFLMILLD 243

Query: 362 SLFAIF 367
             F   
Sbjct: 244 LFFTAL 249


>gi|56751145|ref|YP_171846.1| putative ABC transporter permease [Synechococcus elongatus PCC
           6301]
 gi|81299189|ref|YP_399397.1| hypothetical protein Synpcc7942_0378 [Synechococcus elongatus PCC
           7942]
 gi|56686104|dbj|BAD79326.1| putative ABC transporter permease protein [Synechococcus elongatus
           PCC 6301]
 gi|81168070|gb|ABB56410.1| Protein of unknown function DUF140 [Synechococcus elongatus PCC
           7942]
          Length = 264

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 1/234 (0%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+     ++ +    +   QM  VG S + + +L     GAV   Q A +   FGA    
Sbjct: 24  GQVVLHLFRARIDPYNTREQMANVGPSSLLITLLTGVSVGAVFTIQVAREFINFGAGNIV 83

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             ++++   RE+  +LT V++AGR GSA  AEIG+M++ E+IDA+  +  D V  L+ PR
Sbjct: 84  GGILALALFRELAPVLTGVVVAGRIGSAFAAEIGTMQVTEQIDALLMLRTDPVDYLVVPR 143

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
             A  + +P+L +      +   S+V    Y IP +VFF    +     ++ + LIKA  
Sbjct: 144 TLACCLMMPILCLGFGLIGVTAGSLVAQSAYGIPVSVFFDGIRNFLEPWDVVSSLIKAVI 203

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
               +  +    G      +  +G+  T  VV ++ ++ ++D   + + +  +G
Sbjct: 204 FGWVVAAIGTNWGLTTTGGARGVGESTTGAVVTALLVIFVLDFFLSQLMFSGVG 257


>gi|148284291|ref|YP_001248381.1| ABC transporter permease protein [Orientia tsutsugamushi str.
           Boryong]
 gi|146739730|emb|CAM79561.1| ABC transporter permease protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 301

 Score =  182 bits (462), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 7/272 (2%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                  +       IG++ +K   +     + L              +    +    I+
Sbjct: 34  HLKHKMMNIILALKVIGQRTIKIFYNIILFQNFL-------FASIKGIFTLPYYFNITIQ 86

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +  +G   +P+V   S  +GAV+A Q    + +  A      ++     RE+G ++  +
Sbjct: 87  AIINIGFYSLPIVAATSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGL 146

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR G++IVAEIG+M++ E+IDA+ T+  D ++ L++PR+ A  +SLP L + ++   
Sbjct: 147 IVAGRIGASIVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIG 206

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G  +V     +     +        T  ++ +GLIKA      IGI +   G+     
Sbjct: 207 VFGGYLVSVYRLNFNSYEYIQSTIHHLTSTDVISGLIKAIVFGMIIGITSCFHGYYSDKG 266

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +G   T  VV S  ++++ + +      +
Sbjct: 267 AKGVGIATTYGVVHSSILILLSNYIMTELLLS 298


>gi|109896888|ref|YP_660143.1| hypothetical protein Patl_0560 [Pseudoalteromonas atlantica T6c]
 gi|109699169|gb|ABG39089.1| protein of unknown function DUF140 [Pseudoalteromonas atlantica
           T6c]
          Length = 259

 Score =  182 bits (462), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +     ++       G           +  +F       I+Q+Y VGV  + ++++  
Sbjct: 2   QWLASIGRNTIDTVGSFGRAFLMLMGAIIAKPQFIKNTPLTIKQIYVVGVQSLLIIVVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR+WA IIS+P+L ++ +   I+G  +V   +  +   
Sbjct: 122 KATEQLSSLEMMAVDPLRRVVAPRLWAGIISMPMLALIFSAVGILGGHLVGVDWLGVDVG 181

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   S+     ++  G+IK    A  I  +A+ +G+     S  + K  T  VV S 
Sbjct: 182 SYWSIMQSSVDWNEDVVNGIIKTLVFAFVITWIAIFKGYDAVPTSEGISKATTETVVFSS 241

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ +D +     F I
Sbjct: 242 LAVLGLDFILTALMFGI 258


>gi|110639360|ref|YP_679569.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
 gi|110282041|gb|ABG60227.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406]
          Length = 263

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 67/225 (29%), Positives = 113/225 (50%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
             +    F    +K    L  +I Q Y VG+  +P++ L  FVTG V  +Q    L  FG
Sbjct: 24  AFAFVALFFKQVFKPPFNLRQVIDQCYEVGIKSLPLITLTGFVTGLVFTKQSRPSLEVFG 83

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A  +   L+SI  +R +G L+TA++ AG+ GS+I AE+GSMK+ E+IDA+    ++  + 
Sbjct: 84  ATSWLPSLISIALVRALGPLVTALICAGKVGSSIGAELGSMKVTEQIDAMEVSAINPFKY 143

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+  R+ A    + +L+   +   ++GA + +       FA FF    S     +IF+ +
Sbjct: 144 LVVTRVLATTFMVSILSFYCSLVGLLGAFVNVHANDTTSFANFFQSGFSDINFIDIFSSV 203

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            K+      IGIV   +GF     +  +GK     VV ++ ++ +
Sbjct: 204 TKSLVFGFTIGIVGCYKGFNATQGTRGVGKAANQAVVTAMFLIFV 248


>gi|310817867|ref|YP_003950225.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
 gi|309390939|gb|ADO68398.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
          Length = 250

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 121/243 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +  +LG +   TG   + + +      +L+    ++GV  +P+ +L S   G VI+ 
Sbjct: 4   VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  F L++FG +     ++ +   RE+  +LTA+ +  R GS + AE+G+M + E++DAI
Sbjct: 64  QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G D +R L+ PR+ A ++ +P LT+LA+   +   ++V+   Y I F +FF      
Sbjct: 124 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +  +G+IK       IG+V   +G  V   +  +G+  T  V  +   V + D   
Sbjct: 184 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 243

Query: 365 AIF 367
              
Sbjct: 244 TKI 246


>gi|37678640|ref|NP_933249.1| ABC-type transport system, permease component [Vibrio vulnificus
           YJ016]
 gi|37197380|dbj|BAC93220.1| ABC-type transport system, permease component [Vibrio vulnificus
           YJ016]
          Length = 262

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                 S     G          A   + +  L  L++Q+Y VGV  + ++++     G 
Sbjct: 11  LGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLFIGM 70

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 71  VLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 130

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D ++ +I+PR+WA IIS+PLL ++     I G  +V   +  I    F+S 
Sbjct: 131 LSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSA 190

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S   V+ 
Sbjct: 191 MQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLG 250

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 251 LDFVLTALMFG 261


>gi|268316272|ref|YP_003289991.1| hypothetical protein Rmar_0705 [Rhodothermus marinus DSM 4252]
 gi|262333806|gb|ACY47603.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252]
          Length = 269

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 116/238 (48%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +     G ++   G F    ++    +  LI QM   G     +  +     G V+A Q
Sbjct: 20  RAFFEKAGGLVLFMGRFFRDVWRPPYEVRELINQMDEAGSKSFILTAVTGIAIGVVLAMQ 79

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
               L++FGAE    +++++   +EIG ++T++++AGR G+ + AEIGSM++ E+IDA+ 
Sbjct: 80  SRGTLARFGAEAVLPNMLALSVFKEIGPVITSLVLAGRLGAGMAAEIGSMRVTEQIDALE 139

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
              L     L+  R+ A I+  P+LT   N  A+ G  +      D+ + +F++   S+ 
Sbjct: 140 VAALKPFHYLVITRVVACIVMFPVLTTWTNMIALAGGYVESVISADMDYRLFWNSAFSSL 199

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +++    +K       +GIV+   G+ V   +  +G+     VV S  ++++ D +
Sbjct: 200 RFSDLIVDTLKTSVFGFLVGIVSCYLGYTVRGGTREVGQAAMQAVVISSLLILLADVV 257


>gi|119776212|ref|YP_928952.1| hypothetical protein Sama_3080 [Shewanella amazonensis SB2B]
 gi|119768712|gb|ABM01283.1| putative membrane protein [Shewanella amazonensis SB2B]
          Length = 260

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 76/255 (29%), Positives = 130/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + +    + +Q   +G           S  K +     L++Q+Y VGV  + ++++   
Sbjct: 6   AVARLGRGAINQVAGMGRAGVMLWGAIFSVPKPQKGFPLLVKQLYVVGVQSLIIILVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 66  FIGMVLALQGYTILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++     I G  IV  ++  I    
Sbjct: 126 STEQLSSLEMMAVDPLRQIIAPRFWAGVISMPLLALMFTAVGIWGGHIVGVEWKGIDNGA 185

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + K  T+ VVQS  
Sbjct: 186 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYEVVPNPEGISKATTSTVVQSSL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 246 AVLALDFLLTALMFG 260


>gi|260779434|ref|ZP_05888325.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604524|gb|EEX30824.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 263

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 1/262 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +       +      +       G          AS  +    L  L++Q+Y VGV  + 
Sbjct: 1   MLSDFANFVASTGRRAMGVCESFGRASLMLFGALASRPRPIQNLPLLVKQLYSVGVQSLI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++L     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ 
Sbjct: 61  IIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+P+L ++     I G  +V   +
Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDW 180

Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             I    F+S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T 
Sbjct: 181 KGIDHGSFWSAMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTR 240

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV S   V+ +D +     F 
Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262


>gi|229588433|ref|YP_002870552.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229360299|emb|CAY47156.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 265

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +K+  F         +LG                 G    L++Q++ VGV  + ++++  
Sbjct: 8   EKVRLFGRSGIDIVEVLGRSTIFLFHALLGRGGIGGGFGLLVKQLHAVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  VFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +++PR+WA  ISLPLLTI+ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLTIIFSVVGIWGGSWVAVDWLGVYDG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            +++   ++ T   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWANMQNSVTFTGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|167835250|ref|ZP_02462133.1| ABC transporter, permease protein [Burkholderia thailandensis
           MSMB43]
          Length = 281

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/275 (30%), Positives = 142/275 (51%), Gaps = 2/275 (0%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           + +       +     G+ +  F         +LG +I +                 +  
Sbjct: 8   REAPEPVVRIDPVTRFGQGLFTFGEHLYGGIALLGGLIVDLLSVLRRPRTMP--WTEISA 65

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y  G   +P+  L++F+ G V++   A QL  FGA  + ++++ +  +RE+G +L+A+
Sbjct: 66  NVYAAGAKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAI 125

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGRSGSAI A+IG M++ EE+DA+R MG+     +  PR+ AL +++PLL +  N  A
Sbjct: 126 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIA 185

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G ++       I    F     S   +AN+F GL K       I +VA   GF +  +
Sbjct: 186 LTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKAN 245

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           S SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 246 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 280


>gi|189184336|ref|YP_001938121.1| toluene export ABC transporter permease protein [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181107|dbj|BAG40887.1| toluene export ABC transporter permease protein [Orientia
           tsutsugamushi str. Ikeda]
          Length = 288

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 120/272 (44%), Gaps = 7/272 (2%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                  +       IG++ +K   +     + L              +    +    I+
Sbjct: 21  HLKHKMMNIILALKVIGQRTIKIFYNIILFQNFL-------FASIKGIFTLPYYFNITIQ 73

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +  +G   +P+V   S  +GAV+A Q    + +  A      ++     RE+G ++  +
Sbjct: 74  AIINIGFYSLPIVAATSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGL 133

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR G+++VAEIG+M++ E+IDA+ T+  D ++ L++PR+ A  +SLP L + ++   
Sbjct: 134 IVAGRIGASMVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIG 193

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
           + G  +V     +     +        T  ++ +GLIKA      IGI +   G+     
Sbjct: 194 VFGGYLVSVYRLNFNSYEYIQSTIHHLTSNDVISGLIKAIVFGMIIGITSCFHGYYSDKG 253

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  +G   T  VV S  ++++ + +      +
Sbjct: 254 AKGVGIATTYGVVHSSILILLSNYIMTELLLS 285


>gi|331011542|gb|EGH91598.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 265

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGGGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|71736723|ref|YP_276266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257483485|ref|ZP_05637526.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627577|ref|ZP_06460531.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289647003|ref|ZP_06478346.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|71557276|gb|AAZ36487.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|330869989|gb|EGH04698.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330987098|gb|EGH85201.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 265

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|282891606|ref|ZP_06300097.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498574|gb|EFB40902.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 262

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 123/244 (50%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N        LG       +    + K       +  QM+ +GV  +PVV +  F TG V+
Sbjct: 2   NTMTKMLATLGDYFLLILKVIWVTIKRPPAWSLIRDQMFEIGVMSLPVVAITGFSTGLVL 61

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q  FQLS  G    +  +++   + E+G +LTA M+ GR G+++ AE+G+M++ E+ID
Sbjct: 62  AAQSFFQLSDKGLASATGLMVTKAMMVELGPILTAFMVTGRVGASMCAELGTMRVTEQID 121

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R+M ++ +R LI+PR  A    LPLLTI +    I+G  ++   YY +P + F     
Sbjct: 122 ALRSMSVNPLRYLIAPRFIAGTTMLPLLTIFSCLMGILGGYLLSVYYYQMPPSTFLDPLP 181

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++ +GLIKA      I  ++   G +    +  +G+  T  VV   S+++I + 
Sbjct: 182 LHIKTFDMVSGLIKAFIFGIIIITISCYRGLSTRGGAAGVGRATTNSVVICYSVILISNF 241

Query: 363 LFAI 366
           +  I
Sbjct: 242 IITI 245


>gi|332038535|gb|EGI74978.1| uncharacterized ABC transporter, permease component YrbE
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 259

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 2/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K  + +  +   LG          A    FK     L+RQ+Y VG   + ++++     G
Sbjct: 7   KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E
Sbjct: 67  MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  M +D ++ +I+PR WA  IS+PLL ++ +  AIIGA +V   +  +    F+S
Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLALIFSAVAIIGAHLVGVDWLGVDTGSFWS 186

Query: 300 RFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
              S  +   +I  G+IK+   A  +  +A+ +G+     S  + K  T  VV S   V+
Sbjct: 187 IMQSQVSFQQDILNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246

Query: 359 IIDSLF-AIFYFA 370
             D +  A+ + +
Sbjct: 247 GFDFILTAVMFTS 259


>gi|320330045|gb|EFW86032.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 265

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|52841078|ref|YP_094877.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54293817|ref|YP_126232.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens]
 gi|54296863|ref|YP_123232.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris]
 gi|52628189|gb|AAU26930.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750648|emb|CAH12055.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris]
 gi|53753649|emb|CAH15107.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens]
 gi|307609634|emb|CBW99138.1| hypothetical protein LPW_09231 [Legionella pneumophila 130b]
          Length = 260

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 1/251 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +  N        +G                      L  Q+Y++GV    ++++ +  
Sbjct: 5   IARLGNRGVQALQGIGSSGLFLFSMLFRKPNVLRLWPLLRYQLYFIGVLSCLIIVVSALF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  MG+D +  ++ PR  A  I+LP+L ++ +  AI G   +   +  +    F
Sbjct: 125 TEQLSSMDMMGVDPLGRVVYPRFVAGFIALPILALIFSAVAIYGGYFIGVYWLGVDAGSF 184

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +      +I +G+IK+   A  +  +++ +GF     +  +    T  VV S   
Sbjct: 185 WSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHATTKTVVYSSLA 244

Query: 357 VIIIDSLFAIF 367
           V+ +D L    
Sbjct: 245 VLGLDFLLTAM 255


>gi|86137545|ref|ZP_01056122.1| membrane protein [Roseobacter sp. MED193]
 gi|85825880|gb|EAQ46078.1| membrane protein [Roseobacter sp. MED193]
          Length = 260

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 115/254 (45%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    + +   ++G V   T    A   +   +   L   +  +G   +PVV L +  
Sbjct: 7   LARLGRSTLAALAMIGRVALFTVSAFAHMLRPPYYPRELALSLLQIGWLSLPVVALTAVF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+  + ++ L++PR+ A ++++P+L  + +   I G   V         A +
Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALLTVPVLVGIGDIIGIAGGYTVSVHNLGFNSAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      ++ + L+K  F       +    G   G  +  +G    + V  +  ++
Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGVIAATMGCYYGMQSGRGAQGVGSATKSSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LATNFILTGVFFSL 260


>gi|311695326|gb|ADP98199.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [marine bacterium HP15]
          Length = 260

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I  F           G              +       L++Q+Y VGV  + +V++   
Sbjct: 4   RIAAFGRLGLDIVSSFGRSGRFLAGVLGGVPRPATGFPLLMKQIYAVGVLSLAIVVVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 64  FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +I+PR+WA  I++P+L ++ +   I G  +V   +  +    
Sbjct: 124 ATEQLSSMEMMGVDPLRRVIAPRLWAGFIAMPVLAVIFSVVGIWGGMLVGVDWLGVFEGS 183

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    S+     ++  G+IK+         +A+ +G+     S  +    T  VV S  
Sbjct: 184 FWGNMQSSVDFVDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 244 AVLGLDFVLTAVMFG 258


>gi|189218795|ref|YP_001939436.1| organic solvents resistance ABC-type transport system permease
           component [Methylacidiphilum infernorum V4]
 gi|189185653|gb|ACD82838.1| organic solvents resistance ABC-type transport system permease
           component [Methylacidiphilum infernorum V4]
          Length = 258

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 120/254 (47%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +  +         G +     +   S + F       + Q+  +G     +V++    
Sbjct: 2   IYRVGSLFIKFLKATGEIFFLLLDTLYSFFSFPLRWRLFLMQILTIGAKSQIIVLVTGAF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGAV A Q  F   + G    +  ++++  LRE+G +L A+M++GR GSA+ AEI +MK+
Sbjct: 62  TGAVFAAQVQFHFGKLGMSSATGPVVTLAMLRELGPVLCALMVSGRVGSAMAAEISTMKV 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+R++G+   + LI PR   L++S+PLL  + +   I+   +V      +  A +
Sbjct: 122 TEQIDALRSLGVYVTQYLIVPRFLGLVVSMPLLVAITSGVGILCGYLVSVPLLGVEPAYY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +       +L +++ G +K  F    I +++   G    + +  +G   T  +V S   +
Sbjct: 182 WENTIRFTSLDDVWMGELKGMFFGGLIVLISCYRGLNCQLSAEGVGIAATQAMVYSSIAI 241

Query: 358 IIIDSLFAIFYFAI 371
           +I +  F+     +
Sbjct: 242 LISNFFFSFLMNIL 255


>gi|42524509|ref|NP_969889.1| ABC-type organic solvent resistance transport system permease
           protein [Bdellovibrio bacteriovorus HD100]
 gi|39576718|emb|CAE80882.1| ABC-type organic solvent resistance transport system permease
           protein [Bdellovibrio bacteriovorus HD100]
          Length = 275

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 4/257 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F+          G +I    E     +        +IR M ++G   + ++ L    TG 
Sbjct: 18  FMGTLSEVVSSTGKIILFFNESVRLIFAKPSRFAEIIRHMEFIGNQSIGIICLTGGFTGL 77

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
            ++ Q       F A       +++   RE+G +LT +++A R+G A+ A +G+M++NE+
Sbjct: 78  ALSLQLYLGFKLFNAVNMVGPTVALGITRELGPVLTGLIVAARAGGAMAARLGTMRVNEQ 137

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++  + L+SPR+ A  I +PLL  + +F A++G+  +  K   +  AVF+ +
Sbjct: 138 IDALDVMGVNTKQYLVSPRLVAAFICMPLLVAVFDFVAMLGSWFLCVKMVGLDEAVFWQK 197

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 + +I  GL+K         ++    GF     +  +G+     VVQS+  +II+
Sbjct: 198 IADFIEIRHINEGLLKGMVFGIYFALMCTYRGFNTTGGAKGVGEATNQGVVQSMVGIIIL 257

Query: 361 DSLFA----IFYFAIGI 373
           D        +FY  +GI
Sbjct: 258 DYFATNMIRLFYSLVGI 274


>gi|218439944|ref|YP_002378273.1| hypothetical protein PCC7424_3003 [Cyanothece sp. PCC 7424]
 gi|218172672|gb|ACK71405.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424]
          Length = 264

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      K K    + + QM  VG   + + ++ +   G V   Q + +  
Sbjct: 18  LSAAILLGGQVFLHLLKNKIHHRNTLDQMAIVGPESLTISLVTAAFVGMVFTIQVSREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA  +   ++S+   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  YFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  + LP+LT+L+  + I G   V    Y+I   VF +   +     ++ 
Sbjct: 138 IDYLVIPRVLACSLMLPILTVLSLLTGIAGGIAVAESLYNISPVVFLNSARNFLQTWDLV 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370
           + +IK+      I ++    G      +  +G+  TT VV ++  + + +   + + +  
Sbjct: 198 SCMIKSGIFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVANFFLSWLMFQG 257

Query: 371 IG 372
            G
Sbjct: 258 TG 259


>gi|283852492|ref|ZP_06369760.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
 gi|283572100|gb|EFC20092.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B]
          Length = 256

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/251 (29%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 118 IVKFINDSCSQAHIL-GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           + K  ND+ +   ++ GL+          +         +   M ++G   +P++ +IS 
Sbjct: 1   MKKAGNDTATLVWLVTGLLACARASLSPLTRVKTYQRSRIWSHMAWIGADSLPIISIISA 60

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G ++A Q A QL + GA  +  +L+    + E+G LLT +++AGR+G+A  AEI +M+
Sbjct: 61  CVGIILALQAATQLEKVGALSYVANLVGFSIITELGPLLTCLILAGRAGAAFTAEIATMQ 120

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+EEIDA+  MGLD VR L+ P+  A+ +  PLLT+  +   I    +    +  +    
Sbjct: 121 ISEEIDALEVMGLDPVRFLVWPKFLAMCVMAPLLTLWGDAVGITAGGVFSALFLGLAGKA 180

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +F +     T+ ++  GL+K+     AI IV+  +GF     +  +G++ T  VV+SI +
Sbjct: 181 YFLQTAHFLTMRDLLAGLVKSAGFGVAITIVSCWQGFLAKEGAADVGRRTTKAVVESIFL 240

Query: 357 VIIIDSLFAIF 367
           +I++D  F   
Sbjct: 241 MILLDLFFTAL 251


>gi|294793372|ref|ZP_06758517.1| putative membrane protein [Veillonella sp. 6_1_27]
 gi|294795191|ref|ZP_06760325.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294453983|gb|EFG22358.1| putative membrane protein [Veillonella sp. 3_1_44]
 gi|294455803|gb|EFG24168.1| putative membrane protein [Veillonella sp. 6_1_27]
          Length = 254

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    IG+ ++  ++   S   ++   I                   + +QM ++GV 
Sbjct: 1   MLSWLESIGRVVINGLSQMGSATLLVWQTIKQLKMINLWH---------VFQQMAHLGVD 51

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+
Sbjct: 52  SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 111

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG+MK+ E+IDA+R M +D V  L+ PR+ A +I +P+L        I G   V 
Sbjct: 112 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVA 171

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                +  + +       +T+++   GLIK+      I +V   +G    + + ++G   
Sbjct: 172 TVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 231

Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369
           T+ VV SI +V +++   +   F
Sbjct: 232 TSSVVTSIILVFVLNYFLSTLLF 254


>gi|325105498|ref|YP_004275152.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
 gi|324974346|gb|ADY53330.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
          Length = 260

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 115/240 (47%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     +  + L LV      F    +        +++Q Y +G   + ++ L  F+TG
Sbjct: 7   GFRKKLNNIFYELYLVHKFIVRFFKELFSAPVEWKEIMKQCYLLGFKSLSLITLTGFITG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V  +Q    L++FGA  +   L++I  +R +  LLTA++ AG+ GS I AE+GSMK+ E
Sbjct: 67  IVFTKQSRPSLAEFGATSWLPSLVAIAIIRSLAPLLTALITAGKVGSNIGAELGSMKVTE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+   G +  + L+  R  A  I++P+LT       ++GA + +  + +  +  F  
Sbjct: 127 QIDAMEVSGTNPFKFLVVTRTLATTITIPILTFYTGLVGLLGAFLNVTTFENTSYQAFMQ 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               + +  +IF   IKA      IGIV   +G+     +  +G+     VV  + +V +
Sbjct: 187 SAFESISFLDIFASTIKAIVFGFTIGIVGCYQGYNSSKGTEGVGRAANASVVIGMFLVFL 246


>gi|269797585|ref|YP_003311485.1| hypothetical protein Vpar_0522 [Veillonella parvula DSM 2008]
 gi|282850033|ref|ZP_06259415.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|269094214|gb|ACZ24205.1| protein of unknown function DUF140 [Veillonella parvula DSM 2008]
 gi|282580222|gb|EFB85623.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
          Length = 253

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 9/260 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG+ ++  ++   S   ++   I                   + +QM ++GV  +P
Sbjct: 3   WLESIGRVVINGLSQMGSATLLVWQTIKQLKMINLWH---------VFQQMAHLGVDSLP 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ L     GAV+  Q    L  +GA+     LM++   RE+G +L  V++AGR G+AI 
Sbjct: 54  IISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGAAIT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+MK+ E+IDA+R M +D V  L+ PR+ A +I +P+L        I G   V    
Sbjct: 114 AEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATVI 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             +  + +       +T+++   GLIK+      I +V   +G    + + ++G   T+ 
Sbjct: 174 KGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFSTTSS 233

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV SI +V +++   +   F
Sbjct: 234 VVTSIILVFVLNYFLSTLLF 253


>gi|254497755|ref|ZP_05110528.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12]
 gi|254353048|gb|EET11810.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12]
          Length = 260

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I +  N      H LG                      L  Q+Y+VGV    ++++ +
Sbjct: 3   EFITRLGNRGTRVLHDLGTSGLFLFFMLFRRPNISRLWPLLCHQIYFVGVLSCLIIVVSA 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  MG+D +  +I PR  A  I+LP+L+++ +  AI+G   +   +  +   
Sbjct: 123 KTTEQLSSMDMMGVDPLGRVIYPRFMAGFITLPVLSLIFSAVAILGGYFIGVHWLGVDAG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++ +G+IK+   A  +  +A+ +GF     +  + +  T  VV S 
Sbjct: 183 SFWSNMQAAVNFRIDVLSGIIKSLVFAFVVTWIAVFQGFECVPTAEGISQATTKTVVYSS 242

Query: 355 SIVIIIDSLFAIF 367
             V+ +D L    
Sbjct: 243 LAVLGLDFLLTAM 255


>gi|70728304|ref|YP_258053.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342603|gb|AAY90209.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas
           fluorescens Pf-5]
          Length = 265

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++  F         +LG                 G    L++Q++ VGV  + ++++  
Sbjct: 8   ERVRLFGRSGIDVLAVLGRSTLFLFHALLGRGGIGGSFGLLVKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  ISLPLL ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            +++   ++ T + ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWANMQNSVTFSGDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|90413007|ref|ZP_01221005.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK]
 gi|90326022|gb|EAS42461.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK]
          Length = 260

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I         +   +G           S  + K     L++Q+Y VGV  + ++++    
Sbjct: 6   IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   I G  +V   +  I +  F
Sbjct: 126 TEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFSAVGIWGGQLVGVDWKGIDYGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I    IK+   A  I  +A+  G+     S  + +  T  VV S   
Sbjct: 186 WSVMQASVELGEDIGNSFIKSVVFAITITWIAVFNGYDAVPTSEGISRATTRTVVNSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTALMFG 259


>gi|304396326|ref|ZP_07378207.1| protein of unknown function DUF140 [Pantoea sp. aB]
 gi|304355835|gb|EFM20201.1| protein of unknown function DUF140 [Pantoea sp. aB]
          Length = 260

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +  F           G               F+     LI+Q+Y VGV  + ++++  
Sbjct: 4   KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHTPLLIKQLYSVGVLSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLNTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|66047367|ref|YP_237208.1| hypothetical protein Psyr_4140 [Pseudomonas syringae pv. syringae
           B728a]
 gi|289676091|ref|ZP_06496981.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|63258074|gb|AAY39170.1| Protein of unknown function DUF140 [Pseudomonas syringae pv.
           syringae B728a]
 gi|330895265|gb|EGH27603.1| hypothetical protein PSYJA_00595 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330937995|gb|EGH41776.1| hypothetical protein PSYPI_04838 [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330969694|gb|EGH69760.1| hypothetical protein PSYAR_04288 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 265

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|171915264|ref|ZP_02930734.1| hypothetical protein VspiD_28855 [Verrucomicrobium spinosum DSM
           4136]
          Length = 264

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 116/248 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +    +G + +   E   +       +  + +Q+  +G     VVI+    TGAV
Sbjct: 8   GRLFLNFLIYMGQLAALLRELGIAIKSGVWRMRLVAQQIVSIGYGSQVVVIVTGAFTGAV 67

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
              Q  F+   FG E     ++S+   RE+G +L  +M+ GR G+A+ AEIG+MK+ E+I
Sbjct: 68  FTAQTYFKFKDFGVETGVGAIVSVAMCRELGPVLAGLMVTGRVGAAMAAEIGTMKVTEQI 127

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+R +G+  V  L+ PR +A++IS+PLL   +    +  +  V+   + +P A F+   
Sbjct: 128 DALRALGVHPVDYLMLPRFFAMLISMPLLIAESITFGLAASYCVVVFGFGVPSAWFWQHV 187

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +I  G+IK       I +++  +G      +  +G   T  VV S   ++I +
Sbjct: 188 VEHTNEEDIIYGMIKGLIFGILITVISCHQGLTASDGAVGVGIGTTRAVVYSSLALLICN 247

Query: 362 SLFAIFYF 369
              ++   
Sbjct: 248 FFLSLLLN 255


>gi|268317890|ref|YP_003291609.1| hypothetical protein Rmar_2342 [Rhodothermus marinus DSM 4252]
 gi|262335424|gb|ACY49221.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252]
          Length = 253

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 1/241 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +   ++        LG          ++  +FK +  +L  QM  +G+  +P+V + +  
Sbjct: 1   MQSALSRFLLPFRALGQYTLLLVHAFSALGEFKTYRKNLFDQMVRIGIDSIPIVSMAAAF 60

Query: 178 TGAVIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           +GAV+  Q A+QL   F  +     +++   + E+ V++T  ++AGR G+ I AE+G+M+
Sbjct: 61  SGAVMTVQTAYQLVSPFIPKTVIGAVVAPSMILELAVVVTGFILAGRVGARIAAELGTMR 120

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+  MGL+ V  L+ PR+ A ++ LP+L ++A F  I+   +V      +    
Sbjct: 121 VTEQIDALEAMGLNSVSYLVVPRVVAGMVMLPVLYVVACFVGIVSGILVANLGGFLSTGE 180

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F           +   G+IKA      I  ++  +G+     +  +G+  T   V S   
Sbjct: 181 FLQGARQFFKPFDPIFGVIKAFVFGFVITSISCYKGYFTQGGAEGVGRSTTQAAVLSCVY 240

Query: 357 V 357
           +
Sbjct: 241 I 241


>gi|307105433|gb|EFN53682.1| hypothetical protein CHLNCDRAFT_10117 [Chlorella variabilis]
          Length = 256

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 116/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+      + K    + + Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 10  AAVVLGGQALVRILQGKIHWKNTLDQLNMVGPRSLGVCLLTAAFVGMVFTIQFIREFAKL 69

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D++R +G D V 
Sbjct: 70  GLTRSVGGVLALALSRELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPVD 129

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI+PR+ A +++ P+L +L     +  + ++    Y++   V         +  ++ T 
Sbjct: 130 YLITPRVMACMVAGPILNLLCFCMGMGASVLLADTVYNVSCNVILDSAMRAISSWDVITS 189

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +IK       I  V+   G+     +  +G+  T+ VV S+ ++ + D   ++ +F+
Sbjct: 190 MIKCWVFGTIIATVSCAWGYTTTGGAKGVGESTTSAVVISLVLIFVFDFALSLLFFS 246


>gi|298488498|ref|ZP_07006528.1| permease component of an ABC superfamily transporter [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156839|gb|EFH97929.1| permease component of an ABC superfamily transporter [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 265

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|239904657|ref|YP_002951395.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
 gi|239794520|dbj|BAH73509.1| putative ABC transporter permease protein [Desulfovibrio magneticus
           RS-1]
          Length = 256

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAV 181
           +D      +   ++   G         K +L +  I  + +VG   + +V +I+   G +
Sbjct: 6   DDLGVLVGLAVDLMRCAGRALRPWRPEKPYLRARTISHLAWVGADSLAIVSVIAACVGII 65

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++ Q A QL + GA  +  +L+    + E+G LLT ++++GR+G+A  AEI +M+I+EEI
Sbjct: 66  LSLQAAIQLEKVGAMSYVANLVGFSLVTELGPLLTCLILSGRAGAAFTAEIATMRISEEI 125

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG+D VR L+ P+  A+ +  PLLT+ A+   I    I       +   V+F++ 
Sbjct: 126 DALAVMGIDPVRFLVWPKFVAMAVMAPLLTLWADAVGITAGGIFSSLALGLSGKVYFNQI 185

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  ++ +GL+K+     AI +++  +GF     +  +G++ T  VVQSI ++I++D
Sbjct: 186 AYFLGFKDLLSGLVKSAGFGVAITVISCWQGFLAREGAADVGRRTTAAVVQSIFVMILLD 245

Query: 362 SLFAIF 367
             F   
Sbjct: 246 LFFTAL 251


>gi|262195117|ref|YP_003266326.1| hypothetical protein Hoch_1886 [Haliangium ochraceum DSM 14365]
 gi|262078464|gb|ACY14433.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 328

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 108/267 (40%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
            P  +    S       +   +             LG  I       +   +    L + 
Sbjct: 45  NPAEATAEESEGGFKRAVFTGVRDAFAPVPRFLDRLGEHIILAVRALSWLPRRPLRLANY 104

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           +    Y+G   +P+++L+   TGAV+A Q  F    FG E     +       E+  +L 
Sbjct: 105 LDAAEYIGFGSLPIILLVGLFTGAVMALQSVFAFRDFGLESMVGGVTGKALATELAPVLA 164

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A+M+ GR+ + I  E+G+M+I+E+IDA+ +M ++ ++ L+ PR+ A     P+LT++   
Sbjct: 165 ALMLTGRAAAGIATELGTMRISEQIDALESMAVNPIQFLVLPRLVAGFFMAPILTLIFFV 224

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
             + GA  V      +    F           ++  G++K+      + ++   +GF   
Sbjct: 225 IGMGGAYFVSVISEGVDHGQFVHNTKDILNFVDVLQGILKSAVFGFVVVLIGCYQGFFAS 284

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +G   T  VV     V+I D  
Sbjct: 285 GGGRGVGLGTTRAVVIGSVTVLITDYF 311


>gi|148360512|ref|YP_001251719.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby]
 gi|296106421|ref|YP_003618121.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148282285|gb|ABQ56373.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby]
 gi|295648322|gb|ADG24169.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 260

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 1/251 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +  N        +G                      L  Q+Y++GV    ++++ +  
Sbjct: 5   IARLGNRGVQALQGIGSSGLFLFSMLFRKPNVLRLWPLLRYQLYFIGVLSCLIIVVSALF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  MG+D +  ++ PR  A  I+LP+L ++ +  AI G   +   +  +    F
Sbjct: 125 TEQLSSMDMMGVDPLGRVVYPRFAAGFIALPILALIFSAVAIYGGYFIGVYWLGVDAGSF 184

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +      +I +G+IK+   A  +  +++ +GF     +  +    T  VV S   
Sbjct: 185 WSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHATTKTVVYSSLA 244

Query: 357 VIIIDSLFAIF 367
           V+ +D L    
Sbjct: 245 VLGLDFLLTAM 255


>gi|209526324|ref|ZP_03274853.1| protein of unknown function DUF140 [Arthrospira maxima CS-328]
 gi|209493253|gb|EDZ93579.1| protein of unknown function DUF140 [Arthrospira maxima CS-328]
          Length = 261

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 6/257 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +  +         +  LG      G+      + K    + + QM  VG   + + +L +
Sbjct: 7   RSSLGIWTQRFIASLFLG------GQVLLHILQGKIHRRNTLEQMAIVGPESLFIALLTA 60

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V   Q A +    GA      ++++   RE+  +LT+V+IAGR  SA  AE+G+M
Sbjct: 61  SFVGMVFTIQVAQEFITLGAGHLVGGILALSLSRELTPVLTSVIIAGRVCSAFAAELGTM 120

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+  M  D V  L+ PR+ A  + LPLLTI+   + + G  ++   +Y+IP  
Sbjct: 121 RVTEQIDALYIMKTDPVDYLVIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSV 180

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +F         L ++ +  IK+     AI ++    G      +  +G+  TT VV S+ 
Sbjct: 181 LFLDSIRDLMGLWDLISAEIKSLVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLL 240

Query: 356 IVIIIDSLFAIFYFAIG 372
            + I+D   +   F + 
Sbjct: 241 AIFILDFFLSWLLFKVA 257


>gi|90580197|ref|ZP_01236004.1| hypothetical protein VAS14_19736 [Vibrio angustum S14]
 gi|90438499|gb|EAS63683.1| hypothetical protein VAS14_19736 [Vibrio angustum S14]
          Length = 260

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I         +   +G           S  + +     LI+Q+Y VGV  + ++++   
Sbjct: 5   AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIILVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYLVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   + GA IV   +  I +  
Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+   + +I   +IKA   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTALMFG 259


>gi|323498697|ref|ZP_08103687.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326]
 gi|323316253|gb|EGA69274.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326]
          Length = 262

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + +     G          AS  K    L  L++Q+Y VGV  + +++L    
Sbjct: 8   VASTGRRALAVLESFGRASLMLFGALASKPKPIQNLPLLVKQLYSVGVQSLLIIVLSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G   V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQSVGVDWKGIDHGSF 187

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 188 WSTMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|254468843|ref|ZP_05082249.1| ABC-type transporter, permease component involved in toluene
           tolerance [beta proteobacterium KB13]
 gi|207087653|gb|EDZ64936.1| ABC-type transporter, permease component involved in toluene
           tolerance [beta proteobacterium KB13]
          Length = 259

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K      S+   LG          + S          IR++Y+ GV  + ++++ +F  G
Sbjct: 7   KIGGAIRSKITRLGAATRLFFSIISYSSDSFKRFNLTIREIYFTGVLSLVIIVVSAFFVG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+AI AEIG MK  E
Sbjct: 67  MVLGLQGYYTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGTAITAEIGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M +  +  +++PR WA II++PLL  + +   I+G  +V      +    F+S
Sbjct: 127 QLSAMEMMAVSPIARIVAPRFWAGIITMPLLASIFSMVGILGGYVVAVPMIGVDEGAFWS 186

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +  +      +I  G IK+     A  I+A+ EG+     +  + +  T  VV S   V+
Sbjct: 187 QMQANVDFNYDIVNGFIKSVVFGIACTIIALFEGYDAPPTAEGVSRATTRTVVTSSLAVL 246

Query: 359 IIDSLFAIFYFAI 371
            +D +   F   +
Sbjct: 247 GLDFVLTSFMLTV 259


>gi|88658302|ref|YP_506914.1| hypothetical protein ECH_0084 [Ehrlichia chaffeensis str. Arkansas]
 gi|88599759|gb|ABD45228.1| conserved hypothetical protein [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 275

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 7/260 (2%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           L   IG+ ++  I +        G       +F  + +    +   +++Q   +    +P
Sbjct: 23  LLETIGRYVINVIFNV-------GHSFIFFVKFVYNCFVPPYYYGVILKQFIEIFFFSLP 75

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V + +  TGAV+  Q +  +    +  F   ++ +  +RE+G +L  ++IAGR G+AI 
Sbjct: 76  IVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIA 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG+M+I E+IDA+ T+  +  + L+ PRI + ++++P+L + A+     G  IV    
Sbjct: 136 AEIGTMRITEQIDALFTLDTNPFKYLVVPRIISAMVAMPILILCADLIGAYGGYIVGSYQ 195

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
                 ++           ++  GL+KA      I  +    G+     +  +G   T  
Sbjct: 196 LGYTSEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYYCSGGARGVGLATTYV 255

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV S   +I+ + +  +FY 
Sbjct: 256 VVVSSMFIILFNYIITVFYS 275


>gi|255020159|ref|ZP_05292228.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756]
 gi|254970301|gb|EET27794.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756]
          Length = 260

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 1/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +           LG                   +   +RQ+Y  GV  + ++++ +F TG
Sbjct: 9   ELGRVVRESVPRLGAASRFLLLGLGRVVHRHFSIQQWLRQVYGFGVLSLALMVVAAFFTG 68

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L +FGA      L+++  LRE+G +LTA++ AGR+GSA+ AEI +MK  E
Sbjct: 69  MVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAGSALTAEIATMKATE 128

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M +D +  ++SPR+WA + ++P+L ++ +   I G  ++      +    F+S
Sbjct: 129 QLSAMEMMAVDPLAWVVSPRLWAAVFTVPILCVIFDLVGIFGGYLIAVPVLGVDSGTFWS 188

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +  S  +   +I  GL KA      +  +A  +G++    +  +G   T  VV +   V+
Sbjct: 189 QMQSNVSFRGDILNGLFKALCFGLVVAWIAAWQGYSAKPTAEGVGNATTRSVVAASLAVL 248

Query: 359 IIDSLFAIFYFA 370
            +D +     F+
Sbjct: 249 GLDFILTALLFS 260


>gi|313109004|ref|ZP_07794978.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa
           39016]
 gi|310881480|gb|EFQ40074.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa
           39016]
          Length = 240

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 94/241 (39%), Positives = 144/241 (59%), Gaps = 2/241 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G +I           +++    S+I Q+    V  +P+V L+SF+ G V+A  GA  L+
Sbjct: 1   MGQIIETWSRTVRHPRRWRA--TSVIAQIQRSAVDAIPIVALLSFMVGMVVAFLGATVLA 58

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA IFS+ L++   +RE GVLL A++IAGR+ SA  A+IGSMK NEEIDA+R+  LD 
Sbjct: 59  NFGASIFSVHLVAFSFMREFGVLLPAILIAGRTASAYTAQIGSMKANEEIDALRSNALDP 118

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           + +L+ PR+ AL++SLPLLT++   + I G + V     +IP A F +       + +  
Sbjct: 119 IELLVLPRVLALLVSLPLLTLVGILAGIAGGATVCALSLEIPPAQFLAIVQEKIEVRHFL 178

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G+ K+P  A  I  +   EGF V   + S+G   T+ VVQSI +VI+ID++ A+F+  +
Sbjct: 179 VGMSKSPLFAVMIAAIGCHEGFKVAGSAESVGDHTTSSVVQSIFMVILIDAIAALFFMEM 238

Query: 372 G 372
           G
Sbjct: 239 G 239


>gi|302185305|ref|ZP_07261978.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 265

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|304310283|ref|YP_003809881.1| Toluene tolerance ABC efflux transporter, permease [gamma
           proteobacterium HdN1]
 gi|301796016|emb|CBL44220.1| Toluene tolerance ABC efflux transporter, permease [gamma
           proteobacterium HdN1]
          Length = 260

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + +   D       +G           +    +     L++Q+Y +GV  + ++++  
Sbjct: 3   EWLRRIGADGLGTLRTIGAAGIFLFNALWALPNPRSGTPLLVKQIYSIGVLSLVIIVVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+QFG+E     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M
Sbjct: 63  VFIGMVLALQGYHILTQFGSEEALGQLVALSLLRELGPVVAALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ +   +G+D +R +I+PR WA  I +P L ++ +   +IGA +V  K+  +   
Sbjct: 123 KATEQLASFEMIGVDPLRRIIAPRFWAGFICMPTLAVIFSAVGVIGAYLVGVKWLGVYDG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   ++     ++  G+IK+      +  +A+ +G+     S  + +  T  VV S 
Sbjct: 183 SFWANMQNSVEWGEDVVNGVIKSFAFGAVVTWIAVFQGYDCIPTSEGISRATTRTVVFSS 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 LAVLGLDFILTAVMFG 258


>gi|119469173|ref|ZP_01612157.1| putative transport protein (ABC superfamily, membrane)
           [Alteromonadales bacterium TW-7]
 gi|119447425|gb|EAW28693.1| putative transport protein (ABC superfamily, membrane)
           [Alteromonadales bacterium TW-7]
          Length = 259

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 2/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           K  + +  +   LG          A    FK     L+RQ+Y VG   + ++++     G
Sbjct: 7   KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E
Sbjct: 67  MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  M +D ++ +I+PR WA  IS+PLL I+ +  AIIGA +V   +  +    F+S
Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLAIIFSAVAIIGAHLVGVDWLGVDTGSFWS 186

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
              S  +   ++  G+IK+   A  +  +A+ +G+     S  + K  T  VV S   V+
Sbjct: 187 IMQSQVSFQADVLNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246

Query: 359 IIDSLF-AIFYFA 370
             D +  A+ + +
Sbjct: 247 GFDFILTAVMFTS 259


>gi|89093955|ref|ZP_01166900.1| probable permease of ABC transporter [Oceanospirillum sp. MED92]
 gi|89081841|gb|EAR61068.1| probable permease of ABC transporter [Oceanospirillum sp. MED92]
          Length = 259

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                  +    G       +   +  +       L++Q+Y+VGV  + ++++     G 
Sbjct: 7   LGRHGLDRLAAFGRSSMILFQALVAKPQPLMMFPLLVQQIYFVGVLSLIIIVVSGLFIGM 66

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  +G+E     ++++  +RE+  ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 67  VLGLQGYTILVDYGSEQAVGQMVALSLVRELAPVVTALLFAGRAGSALTAEIGLMKATEQ 126

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  +G+D +R +I+PR WA  I LP+L+ +     + G ++V   +  I    F++ 
Sbjct: 127 LSSLEMIGVDPLRRIIAPRFWAGFICLPILSAIFAIVGVYGGALVSIDWLGIYDGSFWAN 186

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++     ++  GL+KA      +  +A+ +G+     S  + +  T  VV S   V+ 
Sbjct: 187 MQNSVNFYEDVMNGLVKAVVFGFVVTWIAVFQGYDCIPTSEGISQATTKTVVYSSLAVLG 246

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 247 LDFILTAVMFG 257


>gi|289523217|ref|ZP_06440071.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503760|gb|EFD24924.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 259

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +      + S   +LG + S          + +  L S+  QM  VGV  V +V +IS
Sbjct: 3   KWLETLGKATASFLDLLGWIASLAFHVLVHLPRARVDLRSVTDQMERVGVQSVFMVSVIS 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+A Q   Q  +FGA  +   ++++  +RE+  +LT +++AGR GS++ AEIG+M
Sbjct: 63  AFTGMVMAVQTLDQFLKFGASGYIGGVIALSMIREMSPVLTGIVVAGRVGSSMAAEIGTM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E++DA+R  GLD    +  PRI A ++ +P+LTI +      G  + +         
Sbjct: 123 KVTEQLDALRAFGLDEYVFVGVPRILASLVMVPILTIFSMTVGTFGGYLYVAFRGIH-PL 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +F         + +I  GL+K+      I IVA   GF     +  +G+  T  VV S  
Sbjct: 182 IFKDSITLLVNVYDINGGLLKSLVYGFVISIVACACGFRAEGGAKGVGETTTLAVVWSNM 241

Query: 356 IVIIIDSLFAIFYFA 370
           +++I++ + +   F 
Sbjct: 242 LILILNYMLSTLLFG 256


>gi|292486812|ref|YP_003529682.1| hypothetical protein EAMY_0324 [Erwinia amylovora CFBP1430]
 gi|292900790|ref|YP_003540159.1| membrane protein [Erwinia amylovora ATCC 49946]
 gi|291200638|emb|CBJ47770.1| putative membrane protein [Erwinia amylovora ATCC 49946]
 gi|291552229|emb|CBA19266.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora CFBP1430]
 gi|312170880|emb|CBX79139.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +             LG              +F+     L++Q+Y +GV  + +V++  
Sbjct: 4   QALALLGRQGIRFCASLGRAGLMLFHALFGIPRFRRHAPLLVKQLYSIGVLSLLIVVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLKTYGAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGTLVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +   L  +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 YFWSAMQNAVDLQTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|308189078|ref|YP_003933209.1| ABC transport system, permease protein yrbE [Pantoea vagans C9-1]
 gi|308059588|gb|ADO11760.1| Putative ABC transport system, permease protein yrbE [Pantoea
           vagans C9-1]
          Length = 260

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +  F           G               F+     LI+Q+Y VGV  + ++++  
Sbjct: 4   KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHSPLLIKQLYSVGVLSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|323491744|ref|ZP_08096921.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546]
 gi|323314000|gb|EGA67087.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546]
          Length = 262

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 1/261 (0%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +   +      + S     G          AS  +    L  LI+Q+Y VGV  + +
Sbjct: 1   MAGLANFVASVGRRALSVTESFGRASLMLFGALASKPQPIKNLPLLIKQLYTVGVQSLII 60

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++L     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ A
Sbjct: 61  IVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTA 120

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   + 
Sbjct: 121 EIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLVMIFMAVGIWGGQLVGVDWK 180

Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            I    F+S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T  
Sbjct: 181 GIDHGSFWSAMQASVELGQDIGNSMIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRT 240

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV S   V+ +D +     F 
Sbjct: 241 VVHSSLAVLGLDFVLTALMFG 261


>gi|312881882|ref|ZP_07741649.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370461|gb|EFP97946.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 263

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                  +       G           +  +       LIRQ+Y VGV  + +++L    
Sbjct: 9   TASTGQRALQICESFGRASLMLWGALVNRPQPLKNAPLLIRQLYSVGVQSLLIIVLSGLF 68

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 69  IGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 128

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR WA +IS+P+L ++     I G  +V   +  I    F
Sbjct: 129 TEQLSSLEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDWKGIDNGSF 188

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   LIK+   A  +  VA+  G+     S  + +  T  VV S   
Sbjct: 189 WSAMQASVELGQDIGNSLIKSMVFAFTVTWVALFNGYDAVPTSEGISRATTRTVVHSSLA 248

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 249 VLGLDFVLTALMFG 262


>gi|330950264|gb|EGH50524.1| hypothetical protein PSYCIT7_02422 [Pseudomonas syringae Cit 7]
          Length = 265

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVSLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|170077985|ref|YP_001734623.1| hypothetical protein SYNPCC7002_A1371 [Synechococcus sp. PCC 7002]
 gi|169885654|gb|ACA99367.1| conserved hypothetical protein TIGR00056 [Synechococcus sp. PCC
           7002]
          Length = 264

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 1/242 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L       G+      + +      I QM  VG   + + ++ +   G V   Q A +  
Sbjct: 18  LVAATLLGGQVIVHLLRGRFNRRITIEQMAAVGPDSLLIALVTAGFVGMVFTIQVAREFI 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++ +   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  YFGAGTAVGGVLGLSLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALHILRTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR  A  + LPLLT+L+  + + G  I+    Y IP ++F +   S     +I 
Sbjct: 138 IDYLVVPRFLACCLMLPLLTVLSLLTGMAGGLIIAINLYQIPQSIFINSAQSFLEYWDII 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370
           + +IK+      I ++    G      +  +G+  TT VV S+  + I +   + + +  
Sbjct: 198 SAMIKSVVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFIANFFLSWLMFQG 257

Query: 371 IG 372
           +G
Sbjct: 258 LG 259


>gi|59711002|ref|YP_203778.1| toluene ABC transporter membrane protein [Vibrio fischeri ES114]
 gi|59479103|gb|AAW84890.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Vibrio fischeri ES114]
          Length = 264

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +    + S     G           +  +       L++Q+Y VGV  + ++++   
Sbjct: 9   SIEQIGRRALSVCEAFGRATFMLLGAIFAKPQPIKMFPLLLKQLYSVGVLSLVIIVVSGL 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G VI+ QG   L  +GAE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 69  FIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E+I ++  M +D +R +I+PR+WA IIS+P+L ++     I G  IV  ++  I +  
Sbjct: 129 TTEQISSMEMMAVDPLRQIIAPRLWAGIISMPVLAVIFMAVGIWGGQIVGVEWKGIDYGS 188

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+  +  +I   LIK    A  +  +A+  G+     S  +    T  VV S  
Sbjct: 189 FWSVMQSSVDVRYDIINSLIKCVVFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ ID +     F 
Sbjct: 249 AVLGIDFVLTALMFG 263


>gi|288801493|ref|ZP_06406945.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331574|gb|EFC70060.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 248

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               LG  I   G   +   + + F    I++M  +GV  + +V+LISF  GAVI  Q  
Sbjct: 6   YLTSLGEYIMLMGRSFSRPERMRMFFKRYIKEMSSLGVDSIGIVLLISFFIGAVICIQMK 65

Query: 188 FQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +       +        + + E    +  ++++G+ GS I +E+G+M++ ++IDA+  
Sbjct: 66  LNIQSPWMPRWVSGYTTREILILEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDI 125

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I  L+  +P L I ++ + I+GA    +  + +           +  
Sbjct: 126 MGINSASYLIMPKILGLVTIMPFLVIFSSVTGILGAYATAYIGHILSPEDLTLGLQHSFN 185

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D     
Sbjct: 186 PWFVWMSIIKSLFFAFIIASVSSYYGYTVQGGSVEVGKSSTDAVVSSSILILFSDVFLTQ 245

Query: 367 FYF 369
              
Sbjct: 246 ILS 248


>gi|260886513|ref|ZP_05897776.1| toluene tolerance ABC efflux transporter, permease [Selenomonas
           sputigena ATCC 35185]
 gi|330839644|ref|YP_004414224.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC
           35185]
 gi|260863656|gb|EEX78156.1| toluene tolerance ABC efflux transporter, permease [Selenomonas
           sputigena ATCC 35185]
 gi|329747408|gb|AEC00765.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC
           35185]
          Length = 256

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + K  +    +   +G VI           +       +  QM ++GV    +V L  
Sbjct: 4   RLLEKIGSFVLERFEWVGSVILLLAAAVKEMCR-PLRFRHIFAQMSHLGVDSFAIVSLTM 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  Q A +  +FGA+     +++I   RE+G +L  V+ AGR GSAI AEI +M
Sbjct: 63  LFTGMVMTLQVAHEFIRFGAQSTIGGVIAIAIGRELGPVLVGVVCAGRVGSAITAEISTM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+R M    +  L+ PR+ A +  +PLLTI  +   + G   V   Y  I   
Sbjct: 123 KVTEQIDALRVMATSPIGYLVVPRMIACMCMVPLLTIFGDVIGVFGGWFVAVHYAGIASY 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F +  H  A   ++  GLIKA      I ++    G      +  +G+  T  VV +I 
Sbjct: 183 TFTNSIHVFAVPHDVTGGLIKAAVFGIVIAVLGAWYGLHAPEGAEGVGRATTKSVVAAIV 242

Query: 356 IVIIIDSLFAIFYF 369
            +  ++   +   +
Sbjct: 243 CIFFLNVFLSFLLY 256


>gi|58039399|ref|YP_191363.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
 gi|58001813|gb|AAW60707.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
          Length = 261

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 107/238 (44%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +       G +     E  +   +   +       +   G   +PVV L +  
Sbjct: 8   IAALGRAALGLIKQAGALALFALEALSHLVRPPFYWRIFFSSLIETGFFSLPVVALTALF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +GAVIA Q      Q+  +     ++ +   RE+G +L  +M+AGR G+A+ A+IG+M++
Sbjct: 68  SGAVIALQSYVGFGQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMSAQIGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  + ++ L++PR+ A  ++LP L ++A+   ++G   V         + +
Sbjct: 128 TDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVMGGFTVSVAKLGFSPSTY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +    +    ++  GL+KA      I ++    G+     +  +G   T  VV +  
Sbjct: 188 ITATLDSLKTMDVVVGLVKAAVFGFLIALLGCYNGYNSRGGAEGVGSATTAAVVGASI 245


>gi|213966604|ref|ZP_03394755.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|301383114|ref|ZP_07231532.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058647|ref|ZP_07250188.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302133824|ref|ZP_07259814.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213928454|gb|EEB61998.1| membrane protein [Pseudomonas syringae pv. tomato T1]
 gi|330877179|gb|EGH11328.1| hypothetical protein PSYMP_16986 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964018|gb|EGH64278.1| hypothetical protein PSYAC_05120 [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331016694|gb|EGH96750.1| hypothetical protein PLA106_11700 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 265

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L++Q+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLVKQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTKTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|297603137|ref|NP_001053506.2| Os04g0553000 [Oryza sativa Japonica Group]
 gi|38345475|emb|CAE01691.2| OSJNBa0010H02.13 [Oryza sativa Japonica Group]
 gi|255675668|dbj|BAF15420.2| Os04g0553000 [Oryza sativa Japonica Group]
          Length = 344

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 98  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 157

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 158 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 217

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 218 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 277

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 278 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 333


>gi|170728557|ref|YP_001762583.1| hypothetical protein Swoo_4232 [Shewanella woodyi ATCC 51908]
 gi|169813904|gb|ACA88488.1| protein of unknown function DUF140 [Shewanella woodyi ATCC 51908]
          Length = 260

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 2/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +       G          A   + KG     ++Q+Y VGV  + ++ +   
Sbjct: 6   RVANLGRAAIELVIGFGSAGLMLWGAIARKPRAKG-FPLFVKQLYVVGVQSMVLIFVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA ++SLPLL ++     I G  IV  ++  I    
Sbjct: 125 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHIVGVEWKGIDSGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++     +I   LIK+   A  +  +A+  G+ V  +   + K  T  VVQS  
Sbjct: 185 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYQVIPNPEGISKATTQTVVQSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 245 AVLALDFLLTALMFG 259


>gi|222055035|ref|YP_002537397.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221564324|gb|ACM20296.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 257

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N   S    +  +   +            +      Q+  +GV  + +VIL    TG V+
Sbjct: 8   NTLKSFVLEVQELFFLSTRAIGCIVTPPFYYRDFTTQLDKIGVGSLFIVILTGLFTGMVM 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   ++++  ++E+G +L+++M+AGR GSAI AE+G+M + E++D
Sbjct: 68  ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSAITAELGTMVVTEQVD 127

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++  G D ++ L++ R+ A++I++PLL I+ +  +++G  I+    YDI   +++    
Sbjct: 128 AMQVEGTDIIKRLVTSRLKAIVIAMPLLAIITDAVSLVGGYIMA-ANYDINIIMYWKSIP 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  G++K       I +V    G +    +  +G+     VV S   +++ D 
Sbjct: 187 QFMVFQDLIEGVVKPAVFGFIIAMVGCHVGLSTNGGAAGVGESAKRAVVISSVSILVTDF 246

Query: 363 LFAIFY 368
             A  +
Sbjct: 247 FIAKIF 252


>gi|197335795|ref|YP_002155152.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11]
 gi|197317285|gb|ACH66732.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11]
          Length = 264

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +    + S     G           +  +       L++Q+Y VGV  + ++++   
Sbjct: 9   SIEQIGRRALSVCEAFGRATFMLLGAIFAKPQPIKMFPLLLKQLYSVGVLSLVIIVVSGL 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G VI+ QG   L  +GAE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 69  FIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E+I ++  M +D +R +I+PR+WA IIS+P+L ++     I G  IV  ++  I +  
Sbjct: 129 TTEQISSMEMMAVDPLRQIIAPRLWAGIISMPILAVIFMAVGIWGGQIVGVEWKGIDYGS 188

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+  +  +I   LIK    A  +  +A+  G+     S  +    T  VV S  
Sbjct: 189 FWSVMQSSVDVRYDIVNSLIKCVVFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ ID +     F 
Sbjct: 249 AVLGIDFVLTALMFG 263


>gi|237798606|ref|ZP_04587067.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021459|gb|EGI01516.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 265

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      LI+Q+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLIKQLYSVGVMSLVIIVVSGV 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|77457091|ref|YP_346596.1| hypothetical protein Pfl01_0864 [Pseudomonas fluorescens Pf0-1]
 gi|77381094|gb|ABA72607.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 265

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 132/256 (51%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           +++ +F         + G                 G    L++Q++ VGV  + ++++  
Sbjct: 8   ERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSLVIIVVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   LS +G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+M
Sbjct: 68  IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D ++ +I+PR+WA  ISLP+L ++ +   I G S V   +  +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSVVGIWGGSWVAVDWLGVYEG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV + 
Sbjct: 188 SYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 248 LAVLGLDFILTALMFG 263


>gi|78485324|ref|YP_391249.1| hypothetical protein Tcr_0980 [Thiomicrospira crunogena XCL-2]
 gi|78363610|gb|ABB41575.1| ATP-binding cassette (ABC) superfamily transporter, permease
           component [Thiomicrospira crunogena XCL-2]
          Length = 261

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +       G           +       L  L++Q+Y+ GV  +P+++   
Sbjct: 6   RFLASLGESALRLFTSFGRGAIFILSLLPALPYSILRLDLLVKQVYFSGVLSLPIILTAG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  + +E     + ++  LRE+G ++ A++ AGR+GSA+ AEIG M
Sbjct: 66  LFVGMVLSLQGYNVLVDYNSEEAVGTMTALSLLRELGPVVAALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +  E++ A+  M +D ++ + SPR  A +I LP+L+++     I G  IV   +  +   
Sbjct: 126 RSTEQLSALEMMAIDPLKFVFSPRFTAALIVLPMLSLMFIAMGIFGGYIVGVGWLGVDEG 185

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+++ +       ++  G+IK+   A  I I+++ +G+     S  + +  T  VV S 
Sbjct: 186 AFWTQMNEHVDWNEDVVNGIIKSIAFAVLIAIISLFQGYDAIPTSEGVSRATTRTVVHSS 245

Query: 355 SIVIIIDSLFAIFYF 369
             V+ +D +     F
Sbjct: 246 LGVLGLDFILTAIMF 260


>gi|282899746|ref|ZP_06307709.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195361|gb|EFA70295.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 264

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 118/239 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I   G+      + K    + + Q+  VG   + + +L +   GAV   Q A +  
Sbjct: 17  LVEAIFLGGQVTLHLLRGKIHRRNTLEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFI 76

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 77  NFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDP 136

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A ++ LP+LT+L+  + + G  I+    Y++   VF     +   L +I 
Sbjct: 137 IDFLVIPRLLACLLMLPILTLLSLVTGMWGGLIIATNLYNLSDTVFLDSARNFLDLRDIT 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + +IKA      I I+    G      +  +G+  TT VV ++ ++ I +   +   F 
Sbjct: 197 SAMIKAACFGILIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLVIFISNFFLSWLMFQ 255


>gi|284051975|ref|ZP_06382185.1| hypothetical protein AplaP_10931 [Arthrospira platensis str.
           Paraca]
 gi|291567910|dbj|BAI90182.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 261

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 114/236 (48%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+      + K    + + QM  VG   + + +L +   G V   Q A +    GA
Sbjct: 21  LFLGGQVLLHVLQGKIHRRNTLEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFIALGA 80

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++   RE+  +LT+V+IAGR  SA  AE+G+M++ E+IDA+  M  D V  L
Sbjct: 81  GHLVGGVLALSLSRELTPVLTSVIIAGRVCSAFAAELGTMQVTEQIDALYMMKTDPVDYL 140

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A  + LPLLTI+   + + G  ++   +Y+IP  +F         L ++ +  I
Sbjct: 141 VIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEI 200

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           K+     AI ++    G      +  +G+  TT VV S+  + I+D   +   F +
Sbjct: 201 KSVVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256


>gi|182412508|ref|YP_001817574.1| hypothetical protein Oter_0685 [Opitutus terrae PB90-1]
 gi|177839722|gb|ACB73974.1| protein of unknown function DUF140 [Opitutus terrae PB90-1]
          Length = 250

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 2/245 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               +    +G  +       +           LI Q + +G + +P+V ++SF  G+V+
Sbjct: 2   KQFHAIFEGIGSTVLLLVRSLSFIGTLPRQRARLIEQCFTIGYTTLPIVAILSFFIGSVL 61

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q  + +   GA+ +   L+ +   RE+G ++ A+++AGR GS+I AE+ SMK+ +E+D
Sbjct: 62  ALQAGYAMQNVGAKQYIGSLVGLSMARELGPVMVAILLAGRVGSSIAAELASMKVYQEVD 121

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP--FAVFFSR 300
           A+ TM +   R+L+ PR+ A++  +P+L ++AN     G +IV      I      +F+ 
Sbjct: 122 ALVTMNIPPERMLVLPRLIAVLFMMPVLVMIANLVGWFGGAIVAKYTTFISIDPPAYFAV 181

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++  GLIKA      + +V    G         +G  VT  VV S+ +++++
Sbjct: 182 LRRYTEFKDVLNGLIKAEVFGFGVVLVCCNIGLNTRGGPREIGAAVTQAVVTSLILILVL 241

Query: 361 DSLFA 365
           +    
Sbjct: 242 NYFVT 246


>gi|262401810|ref|ZP_06078375.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC586]
 gi|262351782|gb|EEZ00913.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC586]
          Length = 263

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +   G              +       L+RQ+Y +GV  + ++++  
Sbjct: 7   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRNFPLLVRQLYSIGVQSLAIIMVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|77361458|ref|YP_341033.1| ABC transporter membrane protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876369|emb|CAI87591.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 260

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 79/253 (31%), Positives = 131/253 (51%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + K  + +  +   LG   +           FK     LIRQ+Y VG   + ++++    
Sbjct: 6   LQKIGHKTLGRFAALGRSANMLFGALVHIPNFKKGTPLLIRQLYMVGSQSLLIIVVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D ++ +I+PR WA +IS+PLL ++ +  AIIGA +V   +  +    F
Sbjct: 126 TEQLSSLEMMAIDPLKRIIAPRFWAGLISMPLLALIFSAVAIIGAHLVGVDWLGVDTGSF 185

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S  +   +I  G+IK+   A  +  +A+ +G+     S  + K  T  VV S   
Sbjct: 186 WSIMQSQVSFQQDILNGIIKSVVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLA 245

Query: 357 VIIIDSLFAIFYF 369
           V+  D L     F
Sbjct: 246 VLGFDFLLTAVMF 258


>gi|74317917|ref|YP_315657.1| hypothetical protein Tbd_1899 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057412|gb|AAZ97852.1| Protein of unknown function DUF140 [Thiobacillus denitrificans ATCC
           25259]
          Length = 262

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I      +      +G            S          +R++Y+ GV  + ++++  
Sbjct: 4   QAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRRFGLTVRELYFTGVLSLIIILVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  +G+E     L+++  +RE+G ++ A++ A R+GSAI AEIG M
Sbjct: 64  LFVGMVLGLQGYETLQTYGSEEALGILVALSLVRELGPVVAALLFASRAGSAITAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ A+  M +D +  +++PR WA +IS+PLL  L +   + G  +V  +   +   
Sbjct: 124 KATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYLVGVQLIGVDEG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  S      +I  G+IK+     AI  +A+ EG+     +  + +  T  VV S 
Sbjct: 184 AFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRATTRTVVTSS 243

Query: 355 SIVIIIDSLFAIFYF 369
             V+ +D +   F F
Sbjct: 244 LAVLALDFVLTAFMF 258


>gi|260770986|ref|ZP_05879915.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           furnissii CIP 102972]
 gi|260614223|gb|EEX39413.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           furnissii CIP 102972]
 gi|315179032|gb|ADT85946.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio furnissii NCTC
           11218]
          Length = 263

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I        S     G          A   +    L  LI+Q+Y VGV  + ++++  
Sbjct: 7   RWISGVGRRVLSICESFGRASLMLFGALAGRPRPIQNLPLLIKQLYSVGVQSLAIIVVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR+WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQASVELGEDIGNSVIKCVAFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|332172346|gb|AEE21600.1| protein of unknown function DUF140 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 259

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 128/257 (49%), Gaps = 1/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +     ++       G           +  +        I+Q+Y VGV  + ++++  
Sbjct: 2   QWLASIGRNTIDTVGAFGRAFLMLLGAVIAKPQLIKNTPLTIKQIYVVGVQSLLIIVVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR+WA IIS+P+L I+ +   I+G  +V   +  +   
Sbjct: 122 KATEQLSSLEMMAVDPLRRIVAPRLWAGIISMPMLAIIFSAVGILGGHVVGVDWLGVDAG 181

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   S+     ++  G+IK    A  I  +A+ +G+     S  + K  T  VV S 
Sbjct: 182 SYWSIMQSSVDWNEDVVNGIIKTFVFAFVITWIAIFKGYDAIPTSEGISKATTETVVFSS 241

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ +D +     F I
Sbjct: 242 LAVLGLDFILTALMFGI 258


>gi|262170539|ref|ZP_06038217.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus MB-451]
 gi|261891615|gb|EEY37601.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus MB-451]
          Length = 263

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +  +G              +       L+RQ+Y +GV  + ++++  
Sbjct: 7   RWVSSIGQRTLAVSETIGRASLMLFGALVGRPQPIRNFPLLVRQLYSIGVQSLAIIMVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|121727423|ref|ZP_01680551.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229507423|ref|ZP_04396928.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae BX 330286]
 gi|229509652|ref|ZP_04399133.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae B33]
 gi|229516777|ref|ZP_04406223.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC9]
 gi|229606930|ref|YP_002877578.1| ABC transporter permease [Vibrio cholerae MJ-1236]
 gi|254851063|ref|ZP_05240413.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744503|ref|ZP_05418455.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholera CIRS 101]
 gi|262154673|ref|ZP_06028799.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae INDRE 91/1]
 gi|262167549|ref|ZP_06035254.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC27]
 gi|262191035|ref|ZP_06049244.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae CT 5369-93]
 gi|297581366|ref|ZP_06943289.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500651|ref|ZP_07010455.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|121630195|gb|EAX62595.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|229345840|gb|EEO10812.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC9]
 gi|229353126|gb|EEO18065.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae B33]
 gi|229354928|gb|EEO19849.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae BX 330286]
 gi|229369585|gb|ACQ60008.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae MJ-1236]
 gi|254846768|gb|EET25182.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738028|gb|EET93421.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholera CIRS 101]
 gi|262024002|gb|EEY42698.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae RC27]
 gi|262030513|gb|EEY49151.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae INDRE 91/1]
 gi|262033098|gb|EEY51627.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae CT 5369-93]
 gi|297534204|gb|EFH73042.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540820|gb|EFH76877.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327485006|gb|AEA79413.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio
           cholerae LMA3894-4]
          Length = 263

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +   G              +       L+RQ+Y +GV  + ++I+  
Sbjct: 7   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|229527546|ref|ZP_04416938.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae 12129(1)]
 gi|229335178|gb|EEO00663.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae 12129(1)]
          Length = 263

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +   G              +       L+RQ+Y +GV  + ++I+  
Sbjct: 7   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAEI    ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDYGAEISLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|188532480|ref|YP_001906277.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia tasmaniensis Et1/99]
 gi|188027522|emb|CAO95369.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              +F+     L++Q+Y +GV  + +V++  
Sbjct: 4   QALASLGRQGINFCASFGRAGLMLFHALFGIPRFRKHAPLLVKQLYSIGVLSLLIVVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLKTYSAETSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +   L  +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDLRTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|229513445|ref|ZP_04402909.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TMA 21]
 gi|229524502|ref|ZP_04413907.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae bv. albensis VL426]
 gi|261211081|ref|ZP_05925370.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC341]
 gi|229338083|gb|EEO03100.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae bv. albensis VL426]
 gi|229349322|gb|EEO14278.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TMA 21]
 gi|260839582|gb|EEX66193.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           RC341]
          Length = 263

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +   G              +       L+RQ+Y +GV  + ++I+  
Sbjct: 7   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPVRHFPLLVRQLYSIGVQSLAIIIVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|189500799|ref|YP_001960269.1| hypothetical protein Cphamn1_1871 [Chlorobium phaeobacteroides BS1]
 gi|189496240|gb|ACE04788.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides
           BS1]
          Length = 264

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 115/243 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +      +     +  K + +    + Q    G   +P+V++ S   GA++A 
Sbjct: 17  MKEFFLTMQDFFLFSLRAFITIPKIRRYWRDFLDQAKIAGADSLPIVLVSSIAIGALLAV 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       ++  +RE+G L+  +M++ R GS   AE+G+MKI+E+IDA+
Sbjct: 77  EVGNLLEDFGAKTMLGRSTALSVIRELGPLIMGLMLSARYGSRNGAELGAMKISEQIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A +I    LT +A+FS +  A+++   Y+ I   +F++     
Sbjct: 137 RAFGTDPVAKLVMPRLVAALIMFIPLTAIADFSGLYSAALLAEHYHKIDPGIFWNAVFPR 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   G +KAP  A  I +V+   GF     +  +G+     +V S  ++++ +   
Sbjct: 197 LVFKDFVVGFLKAPVFAIIITLVSCFNGFIAQGGTAGVGRSTIKGIVVSSGLILVANFYV 256

Query: 365 AIF 367
           +  
Sbjct: 257 SKL 259


>gi|28871581|ref|NP_794200.1| hypothetical protein PSPTO_4446 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854833|gb|AAO57895.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 265

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L++Q+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLVKQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALSAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTKTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|51246140|ref|YP_066024.1| toluene ABC-transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50877177|emb|CAG37017.1| related to toluene ABC-transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 262

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 7/259 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           K+ +  + +  +   LG             ++    +  ++  ++++G   + VVIL  F
Sbjct: 5   KVEEIGSWAIDRVTNLGRFCLFLLTGIGQIFQKPFQIFRIVENIWFIGTKSMAVVILTGF 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+A QG + L++FG+       +++  +RE+G +LTA+MI  R+GSA+ AEIG+M+
Sbjct: 65  FTGMVLALQGYYALAKFGSAGMLGSAVALTLIRELGPVLTAIMITARAGSAMAAEIGTMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+E++DA++TM ++ V+ + SPR+ A II  PLLT + +   I G   +      +   +
Sbjct: 125 ISEQLDALQTMDINPVKFVFSPRLIASIICFPLLTSIFDVVGIFGGLFIAT-TLKVNGYI 183

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCV 350
           +  R H +  + +I +G+IK+   A  +      +G+        G  S ++    T  V
Sbjct: 184 YMYRVHESVVMEDIRSGIIKSLVFAVVVVSTCCFKGYYAHIQKEGGFGSRAVSLATTNAV 243

Query: 351 VQSISIVIIIDSLFAIFYF 369
           V S  +++I D L      
Sbjct: 244 VSSSVLILIYDYLITYILL 262


>gi|187734672|ref|YP_001876784.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424724|gb|ACD04003.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 266

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 69/249 (27%), Positives = 125/249 (50%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +      LG +     +  +  +  +  +  L+ Q+  +GV   PVVI+    TGAV
Sbjct: 10  GRAALRLVDRLGSIGLLLYQVASCMWSGQFRMRVLVEQIAKIGVQSQPVVIITGAFTGAV 69

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  Q  FQL     E     ++++   RE+G ++T +M+AGR GSA+ AEIG+MK+ E++
Sbjct: 70  LEAQTLFQLQTVRMETMGGAVVAVGMFRELGPVITGLMLAGRVGSAMAAEIGTMKVTEQV 129

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+++M +D V  L+ PRI A++IS+P+L + A    I  A IV    +++  A +    
Sbjct: 130 DALKSMNVDPVDYLVKPRIQAMLISMPILMMEAVLVGIASAYIVSVTAFNVDQAYWMHFM 189

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               T+ +I   L+KA      I  ++ +EG      +  +GK     +V +   ++I +
Sbjct: 190 SKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKSTMQAMVYASVALLIAN 249

Query: 362 SLFAIFYFA 370
            +  +   +
Sbjct: 250 FILTMILNS 258


>gi|238019665|ref|ZP_04600091.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748]
 gi|237863706|gb|EEP64996.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748]
          Length = 242

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 2/244 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G                   L  + +QM ++GV  +P++ L     GAV+  Q
Sbjct: 1   MNGLSQMGSATLLVWHTIRQLK--MINLWHVFQQMAHLGVDSLPIISLTLLFAGAVMTLQ 58

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
               L  +GA+     LM++   RE+G +L  V++AGR G+AI AEIG+MK+ E+IDA+R
Sbjct: 59  ITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGAAITAEIGTMKVTEQIDALR 118

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            M +D +  L+ PR+ A +I +P+L        I G   V      +  + +       +
Sbjct: 119 VMAVDPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATAIKGLAPSTYLDSIQMFS 178

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           T+++   GL+K+      I +V   +G    + + ++G   T+ VV SI +V +++   +
Sbjct: 179 TISDFTLGLVKSSVFGAVIALVGSYKGMETKMGAEAVGFSTTSSVVTSIILVFVLNYFLS 238

Query: 366 IFYF 369
              +
Sbjct: 239 TLLY 242


>gi|308051140|ref|YP_003914706.1| hypothetical protein Fbal_3434 [Ferrimonas balearica DSM 9799]
 gi|307633330|gb|ADN77632.1| protein of unknown function DUF140 [Ferrimonas balearica DSM 9799]
          Length = 260

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I +  + +      LG              +    L  LI+Q+Y VGV  + ++++  
Sbjct: 4   ERIRRLGSGALKWVAGLGRAGLMLVGALVRRPQPGKMLPLLIKQLYQVGVLSMVIILVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V  ++  I   
Sbjct: 124 KATEQLASMEMMAVDPLQRVIAPRFWAGVISMPLLALMFTTIGIWGGHLVGVEWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++     +I   LIK+   A  +  +A+ +G+     +  + +  T  VV + 
Sbjct: 184 AFWSILTASVEWQKDILNCLIKSVVFAFVVTWIALFKGYDAVPTAEGISRATTETVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLALDFVLTAVMFG 259


>gi|56459515|ref|YP_154796.1| ABC-type transport system involved in resistance to organic
           solvents, permease [Idiomarina loihiensis L2TR]
 gi|56178525|gb|AAV81247.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Idiomarina loihiensis
           L2TR]
          Length = 259

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I             +G  ++          +        I+QMY VGV  + +VI+  
Sbjct: 3   QFIRSVGRQVLDSLAGIGYALAMLMGAIIGKPQPAKSWPLFIKQMYVVGVLSMLIVIVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  +GAE     ++++  LRE+G ++T ++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTGLLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA ++S+PLL ++ +   I G  +V   +  +   
Sbjct: 123 KATEQLSSLEMMAVDPLRRVIAPRFWAGVVSMPLLALMFSAVGIYGGYLVGSGWLGVDEG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++  G+IK+   A  +  +A+ +G+     S  +    T+ VV + 
Sbjct: 183 AFWSVMQSAVDWQDDLLNGIIKSIVFAFVVTWIALYKGYRSVPTSAGISAATTSTVVTAS 242

Query: 355 SIVIIIDSLFAIFYFA 370
             ++ +D +     F 
Sbjct: 243 LAILGLDFILTAIMFG 258


>gi|88861156|ref|ZP_01135790.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas tunicata D2]
 gi|88816878|gb|EAR26699.1| putative transport protein (ABC superfamily, membrane)
           [Pseudoalteromonas tunicata D2]
          Length = 259

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 76/251 (30%), Positives = 133/251 (52%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
              ++ ++   +G  +        S   F+     LI+Q+Y VG   + ++++     G 
Sbjct: 8   LGKETLNRFASVGRALMMLIGAIFSVPNFRKGTPLLIKQLYMVGFLSLMIIVVSGLFIGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+A QG   L  +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 68  VLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D ++ +I+PR WA IIS+PLL ++ +  AI+GA +V   +  I    F+S 
Sbjct: 128 LSSLEMMAIDPLKRIIAPRFWAGIISMPLLALIFSAVAILGAHLVGVDWLGIDSGSFWSV 187

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             +  +   +I  G+IK+   A  +  +A+ +G+     S  + K  T  VVQS   V+ 
Sbjct: 188 MQAQVSFEKDILNGMIKSLVFAFVVTWIALYKGYFCIPTSEGISKATTETVVQSSLAVLG 247

Query: 360 IDSLFAIFYFA 370
            D +     F+
Sbjct: 248 FDFVLTAVMFS 258


>gi|209694101|ref|YP_002262029.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238]
 gi|208008052|emb|CAQ78191.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238]
          Length = 264

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + S    +G           +  +       L++Q+Y VGV  + ++++    
Sbjct: 10  VENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMFPLLLQQLYSVGVLSLVIIVVSGLF 69

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G VI+ QG   L  +GAE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 70  IGMVISLQGYVILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKT 129

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR+WA +IS+PLL ++     I G  IV  ++  I    F
Sbjct: 130 TEQLSSMEMMAIDPLRRIIAPRLWAGVISMPLLAMIFMAVGIWGGQIVGVEWKGIDHGSF 189

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  +  +I   LIK    A  +  +A+  G+     S  +    T  VV S   
Sbjct: 190 WSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISLATTRTVVHSSLA 249

Query: 357 VIIIDSLFAIFYFA 370
           V+ ID +     F 
Sbjct: 250 VLGIDFVLTALMFG 263


>gi|120555619|ref|YP_959970.1| hypothetical protein Maqu_2708 [Marinobacter aquaeolei VT8]
 gi|120325468|gb|ABM19783.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8]
          Length = 260

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           +I        +     G          A   +       L++Q+Y VGV  + +V++   
Sbjct: 4   RIAGLGRLGIAIIASFGRSGQFLFGVLAGVPRPATGFPLLVKQLYAVGVLSLAIVVVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 64  FIGMVLGLQGYTILSDYGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +++PR+WA  +++P+L ++ +   I G  +V  ++  +    
Sbjct: 124 ATEQLSSMEMMGVDPLRRVVAPRLWAGFLAMPVLAMIFSVVGIWGGMLVGVEWLGVFEGS 183

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    S+     ++  G IK+         +A+ +G+     S  +    T  VV S  
Sbjct: 184 FWGNMQSSVDFVDDVLNGFIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 244 AVLGLDFVLTAVMFG 258


>gi|22124065|ref|NP_667488.1| hypothetical protein y0145 [Yersinia pestis KIM 10]
 gi|45443560|ref|NP_995099.1| hypothetical protein YP_3829 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597810|ref|YP_072001.1| ABC transporter, permease subunit, toluene tolerance protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108809720|ref|YP_653636.1| hypothetical protein YPA_3729 [Yersinia pestis Antiqua]
 gi|108813616|ref|YP_649383.1| hypothetical protein YPN_3456 [Yersinia pestis Nepal516]
 gi|145597639|ref|YP_001161715.1| hypothetical protein YPDSF_0323 [Yersinia pestis Pestoides F]
 gi|153950379|ref|YP_001399442.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758]
 gi|153997349|ref|ZP_02022449.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|162419182|ref|YP_001605691.1| hypothetical protein YpAngola_A1145 [Yersinia pestis Angola]
 gi|165928109|ref|ZP_02223941.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937439|ref|ZP_02226002.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011407|ref|ZP_02232305.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212216|ref|ZP_02238251.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400680|ref|ZP_02306189.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420726|ref|ZP_02312479.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167426982|ref|ZP_02318735.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470182|ref|ZP_02334886.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           FV-1]
 gi|170022764|ref|YP_001719269.1| hypothetical protein YPK_0513 [Yersinia pseudotuberculosis YPIII]
 gi|186897002|ref|YP_001874114.1| hypothetical protein YPTS_3704 [Yersinia pseudotuberculosis PB1/+]
 gi|218930586|ref|YP_002348461.1| hypothetical protein YPO3574 [Yersinia pestis CO92]
 gi|229836870|ref|ZP_04457035.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229839230|ref|ZP_04459389.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229899795|ref|ZP_04514936.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229904110|ref|ZP_04519221.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270488545|ref|ZP_06205619.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505304|ref|YP_003569366.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003]
 gi|21956812|gb|AAM83739.1|AE013614_13 hypothetical protein y0145 [Yersinia pestis KIM 10]
 gi|45438429|gb|AAS63976.1| putative membrane protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591092|emb|CAH22756.1| ABC transporter, permease subunit, toluene tolerance protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108777264|gb|ABG19783.1| membrane protein [Yersinia pestis Nepal516]
 gi|108781633|gb|ABG15691.1| putative membrane protein [Yersinia pestis Antiqua]
 gi|115349197|emb|CAL22162.1| putative membrane protein [Yersinia pestis CO92]
 gi|145209335|gb|ABP38742.1| membrane protein [Yersinia pestis Pestoides F]
 gi|149288986|gb|EDM39066.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|152961874|gb|ABS49335.1| putative ABC transporter, permease protein YrbE [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351997|gb|ABX85945.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           Angola]
 gi|165914544|gb|EDR33158.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165919883|gb|EDR37184.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989791|gb|EDR42092.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206962|gb|EDR51442.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961532|gb|EDR57553.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050048|gb|EDR61456.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167054022|gb|EDR63850.1| putative ABC transporter, permease protein YrbE [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169749298|gb|ACA66816.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis
           YPIII]
 gi|186700028|gb|ACC90657.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678228|gb|EEO74333.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229687287|gb|EEO79362.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695596|gb|EEO85643.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705813|gb|EEO91822.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262363367|gb|ACY60088.1| hypothetical protein YPD4_3184 [Yersinia pestis D106004]
 gi|262367255|gb|ACY63812.1| hypothetical protein YPD8_3142 [Yersinia pestis D182038]
 gi|270337049|gb|EFA47826.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294355763|gb|ADE66104.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003]
 gi|320017116|gb|ADW00688.1| putative toluene transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 260

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +        +     G              + +     LI+Q+Y VGV  + ++++  
Sbjct: 4   KSLASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLIKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFALTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|149278644|ref|ZP_01884780.1| ABC transporter, permease [Pedobacter sp. BAL39]
 gi|149230639|gb|EDM36022.1| ABC transporter, permease [Pedobacter sp. BAL39]
          Length = 244

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190
            G  I           K   ++ ++ +QM ++GV  + ++ +IS   GAV+  Q AFQL 
Sbjct: 6   FGRYILLLKAVFRKPEKASIYMKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S F  +     +     + E+   ++A+++AG+ GSAI +EIG+M+++E+IDA+  MG++
Sbjct: 66  SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I A I  +PLL I++ F +I G  I       +  A +     +      I
Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSAAEYVQGITTDFNPYTI 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              L+KA      I  V   EGF V   +  + +  T  VV S   ++  D +      
Sbjct: 186 VVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCITILACDYIVTQLLL 244


>gi|15642515|ref|NP_232148.1| hypothetical protein VC2519 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591413|ref|ZP_01678693.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|147675288|ref|YP_001218017.1| hypothetical protein VC0395_A2101 [Vibrio cholerae O395]
 gi|153215706|ref|ZP_01950087.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153801107|ref|ZP_01955693.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818001|ref|ZP_01970668.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822409|ref|ZP_01975076.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825790|ref|ZP_01978457.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829794|ref|ZP_01982461.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227082638|ref|YP_002811189.1| hypothetical protein VCM66_2441 [Vibrio cholerae M66-2]
 gi|254225914|ref|ZP_04919516.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254291437|ref|ZP_04962229.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|9657102|gb|AAF95661.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546729|gb|EAX56904.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124114624|gb|EAY33444.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124123340|gb|EAY42083.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|125621540|gb|EAZ49872.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126511436|gb|EAZ74030.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520052|gb|EAZ77275.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317171|gb|ABQ21710.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148874712|gb|EDL72847.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149740513|gb|EDM54628.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150422627|gb|EDN14582.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227010526|gb|ACP06738.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014409|gb|ACP10619.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 258

 Score =  179 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +   G              +       L+RQ+Y +GV  + ++I+  
Sbjct: 2   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 122 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 181

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 182 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 241

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 242 LAVLGLDFVLTALMFG 257


>gi|330958007|gb|EGH58267.1| hypothetical protein PMA4326_05446 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 265

 Score =  179 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L++Q+Y VGV  + ++++   
Sbjct: 9   RVALLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLVKQLYSVGVMSLVIIVVSGI 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  ISLP+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTKTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|229521585|ref|ZP_04411003.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TM 11079-80]
 gi|229341179|gb|EEO06183.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           cholerae TM 11079-80]
          Length = 263

 Score =  179 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +   G              +       L+RQ+Y +GV  + ++I+  
Sbjct: 7   RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     + G  +V   +  I   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGVWGGQLVGVDWKGIDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|261250143|ref|ZP_05942719.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           orientalis CIP 102891]
 gi|260939259|gb|EEX95245.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           orientalis CIP 102891]
          Length = 262

 Score =  179 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
                  +      S +     G          AS  +    L  LI+Q+Y VGV  + +
Sbjct: 1   MAGFANFVASVGQRSMAICESFGRASLMLFGAIASRPQPIKNLPLLIKQLYSVGVQSLII 60

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++L     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ A
Sbjct: 61  IVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTA 120

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ ++  M +D ++ +I+PR WA +IS+P+L ++     I G  +V   + 
Sbjct: 121 EIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDWK 180

Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            I    F+S   ++  L  +I   +IK+   A  +  +A+  G+     S  + +  T  
Sbjct: 181 GIDHGSFWSAMQASVELGQDIGNSMIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRT 240

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV S   V+ +D +     F 
Sbjct: 241 VVHSSLAVLGLDFVLTALMFG 261


>gi|89075259|ref|ZP_01161686.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34]
 gi|89048940|gb|EAR54508.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34]
          Length = 260

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I         +   +G           S  + +     LI+Q+Y VGV  + ++I+   
Sbjct: 5   AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYLVLAGFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   + GA +V   +  I +  
Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQVVGVDWKGIDYGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+   + +I   +IKA   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTALMFG 259


>gi|258622787|ref|ZP_05717805.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258625813|ref|ZP_05720692.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262166549|ref|ZP_06034286.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus VM223]
 gi|258582051|gb|EEW06921.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258584975|gb|EEW09706.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|262026265|gb|EEY44933.1| uncharacterized ABC transporter permease component YrbE [Vibrio
           mimicus VM223]
          Length = 258

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + + +   G              +       L+RQ+Y +GV  + ++++  
Sbjct: 2   RWVSSIGQRTLAVSETFGRASLMLFGALVGRPQPIRNFPLLVRQLYSIGVQSLAIIMVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 122 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 181

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 182 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 241

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 242 LAVLGLDFVLTALMFG 257


>gi|34540774|ref|NP_905253.1| hypothetical protein PG1033 [Porphyromonas gingivalis W83]
 gi|34397088|gb|AAQ66152.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 248

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 1/234 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G          +   +++     LI+++  +GV  V +VI+ISF  GAVI  Q + 
Sbjct: 6   LQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLSL 65

Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            ++      F        + L E    +  +++AG+ GS+I +E+G+M++ E+IDA+  M
Sbjct: 66  NMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVM 125

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I   ++ +P+L+I++  + I+G  +      ++P + F        + 
Sbjct: 126 GVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSP 185

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            N+F  +IK+   A  I  VA   G+ V   +  +GK  T  VVQ   +V++ D
Sbjct: 186 YNVFYSIIKSVAYAFIISSVAGYYGYTVKGGALQVGKASTNAVVQCSILVLVAD 239


>gi|157373873|ref|YP_001472473.1| hypothetical protein Ssed_0734 [Shewanella sediminis HAW-EB3]
 gi|157316247|gb|ABV35345.1| protein of unknown function DUF140 [Shewanella sediminis HAW-EB3]
          Length = 260

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 2/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      +      LG          A   + KG     ++Q+Y VGV  + ++ +    
Sbjct: 7   LASLGRLTIDFVVGLGRAGVMLWGAIARKPRIKG-FPLFVKQLYVVGVQSMVLIFVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L  FG E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKS 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA ++SLPLL ++     I G  +V  ++  I    F
Sbjct: 126 TEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHVVGVEWKGIDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I   +IK+   A  +  +A+  G+ V  +   + K  T  VVQS   
Sbjct: 186 WSILQASVEWREDIVNCIIKSLVFAVVVTWIALYRGYRVIPNPEGISKATTQTVVQSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F 
Sbjct: 246 VLALDFLLTAVMFG 259


>gi|311746375|ref|ZP_07720160.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
 gi|126575261|gb|EAZ79593.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
          Length = 263

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
               F    +     L  +  Q Y +GV  +P++ L  F+ G V   Q    LS+FGA  
Sbjct: 27  FVRRFFKEVFIPPYELKEVFHQCYRIGVESLPLISLTGFIVGIVFTNQSRPSLSEFGATS 86

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           +   L+SI  +R +G L+TA++ AG+ GS+I AEIGSMK+ E+IDA+     +  + L+ 
Sbjct: 87  WLPSLISIAVVRAMGPLVTALIAAGKMGSSIGAEIGSMKVTEQIDAMEVSATNPFKFLVV 146

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            R+ A    +P+L +  +F A++G+ + +     +    FF +   + +  +I + ++K+
Sbjct: 147 TRVLATTFMIPILVMYTDFVALMGSFLSVNANEMVSMTTFFVQVFESISFLDITSSVLKS 206

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 IGIV   +G+     +  +G+   + VV ++ ++ I
Sbjct: 207 LLFGFTIGIVGCYKGYNSSKGTEGVGRAANSAVVMAMFLIFI 248


>gi|269960373|ref|ZP_06174747.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834984|gb|EEZ89069.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 263

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + +     G           +  +       LI+Q+Y VGV  + ++++  
Sbjct: 7   QFVASLGRRTLAICEAFGRATLMLIGALVTRPQPIKNFPLLIKQLYSVGVQSLAIIVVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I GA IV   +  +   
Sbjct: 127 KATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQIVGVDWKGVDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|259907019|ref|YP_002647375.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia pyrifoliae Ep1/96]
 gi|224962641|emb|CAX54096.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia pyrifoliae Ep1/96]
 gi|283476814|emb|CAY72652.1| UPF0393 inner membrane protein yrbE [Erwinia pyrifoliae DSM 12163]
          Length = 260

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    LG              +F+     L++Q+Y +GV  + +V++  
Sbjct: 4   QALASLGRQGINFCASLGRAGLMLFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  +GAE     ++++  LRE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILKTYGAEASLGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +   L  +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDLQTDIINCTIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|329114428|ref|ZP_08243190.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
 gi|326696504|gb|EGE48183.1| Putative ABC transporter permease protein [Acetobacter pomorum
           DM001]
          Length = 321

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 122/270 (45%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
            F  N    L   +   + +    + S     G +        +   +   +    +   
Sbjct: 51  HFSRNGQSTLMDMVLDLVARLGRATLSLIRAAGALALFAASGLSHIVRPPFYGRVFLSTF 110

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
              G   +PVV L +  +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+
Sbjct: 111 LETGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMV 170

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR G+A+ A+IG+M++ ++IDA+ T+  + ++ L++PR+ A +I+LPLL ++A+   + 
Sbjct: 171 AGRVGAAMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVA 230

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           G   V           + +   ++    ++  GL+KA      I ++    G+     + 
Sbjct: 231 GGFTVAVVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAE 290

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +G   T  VV +  +++  D L    +F+
Sbjct: 291 GVGSATTAAVVAASIMLLAFDYLLTDLFFS 320


>gi|119493784|ref|ZP_01624353.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106]
 gi|119452479|gb|EAW33666.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106]
          Length = 259

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
               +   G+      + K +  + + QM  VG   + + ++ +   G V   Q + +  
Sbjct: 14  FVAALFLGGQVIVHLLQGKIYRRNTLEQMAAVGPESLLIALITAGFVGMVFTIQVSREFI 73

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA   +  ++++   RE+  +LTAV+I GR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 74  TLGAGNLAGGVLALSLARELSPVLTAVIITGRVGSAFAAEIGTMQVTEQIDALYVLKTDP 133

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  + LPLL I+   + + G  ++    Y+IP  +F     +  TL ++ 
Sbjct: 134 VDYLVIPRVIACCLMLPLLNIICLMTGLAGGLLISSSLYNIPPNMFLESVQNFLTLWDLV 193

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI-FYFA 370
           +G IKA      I +++   G      +  +G+  TT VV  +  + I+D   +   +  
Sbjct: 194 SGEIKALIFGGTIAVISTNWGLTTTGGAKGVGQSTTTAVVTCLLSIFILDFFLSWSMFHG 253

Query: 371 IG 372
           IG
Sbjct: 254 IG 255


>gi|291615986|ref|YP_003518728.1| YrbE [Pantoea ananatis LMG 20103]
 gi|291151016|gb|ADD75600.1| YrbE [Pantoea ananatis LMG 20103]
 gi|327396238|dbj|BAK13660.1| inner membrane protein YrbE [Pantoea ananatis AJ13355]
          Length = 260

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +              G               F+     LI+Q+Y +GV  + ++++  
Sbjct: 4   KALASLGRRGIGTCASFGRAGLMLFHALVGKPAFRKHFPLLIKQLYSIGVLSLVIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ +GAE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGITGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +     +++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRSDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|254464755|ref|ZP_05078166.1| membrane protein [Rhodobacterales bacterium Y4I]
 gi|206685663|gb|EDZ46145.1| membrane protein [Rhodobacterales bacterium Y4I]
          Length = 260

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 114/254 (44%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    + +    +G          +   +   +   ++  +  +G   +PVV L +  
Sbjct: 7   LARLGRTALAGLSAVGRAALFALGAFSHMLRPPYYPREVLNSLLNIGWLSLPVVGLTAIF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+
Sbjct: 67  TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+ T+    ++ L++PR+ A +I++P+L  + +   I+G   V  +      A +
Sbjct: 127 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGIGDIIGIMGGYTVAVQNLGFNAAAY 186

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      +I + L+K         ++    G   G  +  +G+     V  +  ++
Sbjct: 187 LKNTVDFLEPLDIISSLVKGAAFGTIAAMMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 246

Query: 358 IIIDSLFAIFYFAI 371
           +  + +    +F++
Sbjct: 247 LAANFVLTGVFFSL 260


>gi|300718605|ref|YP_003743408.1| toluene tolerance ABC transporter, permease subunit [Erwinia
           billingiae Eb661]
 gi|299064441|emb|CAX61561.1| toluene tolerance ABC transporter, permease subunit [Erwinia
           billingiae Eb661]
          Length = 257

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +        +     G              +F+     LI+Q+Y +GV  + +V++    
Sbjct: 3   LRALGRQGINTCASFGRAGLMLFHALVGIPRFRKHAPLLIKQLYSIGVLSLLIVVVSGLF 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ +GA+     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 63  IGMVLGLQGYLVLNTYGADSSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +ISPR WA  IS+PLLT++     I+G +IV   +  I    F
Sbjct: 123 TEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGIMGGAIVGVSWKGIDSGFF 182

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +   +  +I   +IK+   A  +  +A+  G+     S  + +  T  VV +   
Sbjct: 183 WSAMQNAVDVRTDILNCVIKSAVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHASLA 242

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 243 VLGLDFVLTALMFG 256


>gi|330446812|ref|ZP_08310463.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491003|dbj|GAA04960.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
          Length = 260

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +       +   +G           S  +       L++Q+Y VGV  + ++++   
Sbjct: 5   AIARIGRSGIDKCQTIGRATLMLFGALVSKPQPVKMFPLLMKQLYSVGVLSMAIILVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLSLQGYIVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +I+PR WA +IS+PLL ++ +   + GA IV   +  I +  
Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGS 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   S+   + +I   +IKA   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVVFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFILTALMFG 259


>gi|296122312|ref|YP_003630090.1| hypothetical protein Plim_2064 [Planctomyces limnophilus DSM 3776]
 gi|296014652|gb|ADG67891.1| protein of unknown function DUF140 [Planctomyces limnophilus DSM
           3776]
          Length = 260

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 123/247 (49%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G     T          +     L    Y +G   +PV+++     G V+A 
Sbjct: 2   LLTSVRTVGDAAIFTSTVALGLATRRSRSAILWPIFYEIGCRSMPVILITGGFIGMVLAV 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q   QL+  G +     ++++  ++E+G +L A M+AGR GSA+ AEIG+MK+ E+IDA+
Sbjct: 62  QSFDQLAAIGLQSRLGSVVNVSLVKELGPVLAATMLAGRVGSAMAAEIGTMKVTEQIDAL 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           + +G + V  L+ PR  A ++ +P LT+LA+   ++    +  +   I   +++    S 
Sbjct: 122 QALGANPVMFLVCPRFLACVLLIPALTLLADGIGMLSGWYLSVQVLGISSHLYWFYSDSY 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  +I +G+IK+ F   AI +VA   GF     +  +G+  T   V S  +V+ +D L 
Sbjct: 182 ITSLDIISGVIKSIFFGGAIALVACHRGFHCSSGAEGVGRAATEAFVCSFILVLAMDFLL 241

Query: 365 AIFYFAI 371
            +F+  +
Sbjct: 242 GVFFIQL 248


>gi|270263239|ref|ZP_06191509.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13]
 gi|270042927|gb|EFA16021.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13]
          Length = 260

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        + +   G              + +     L++QM+ VGV  + ++++  
Sbjct: 4   QALASLGRRGINTSASFGRAGLMLFNALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLTI+     I G SIV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTIIFVAVGIWGGSIVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   L+K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|253997969|ref|YP_003050032.1| hypothetical protein Msip34_0256 [Methylovorus sp. SIP3-4]
 gi|253984648|gb|ACT49505.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4]
          Length = 263

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 8/265 (3%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N    +   +G +I+  +    S A      +  +GE     +         IR++Y+ 
Sbjct: 2   LNRLAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFT 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR
Sbjct: 55  GVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+AI AEIG MK  E++ A+  M +  +  +++PR WA ++S+PLL  L +   ++G  
Sbjct: 115 AGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  ++     +I  G+IK+     A  ++A+ EGF     +  +
Sbjct: 175 LVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367
            +  T  VV S   V+ +D +   F
Sbjct: 235 SRATTRTVVNSSLAVLGLDFILTSF 259


>gi|114766131|ref|ZP_01445135.1| membrane protein [Pelagibaca bermudensis HTCC2601]
 gi|114541591|gb|EAU44633.1| membrane protein [Roseovarius sp. HTCC2601]
          Length = 260

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 107/250 (42%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +      +G V        +   +   +    +  +  +G   +PVV L +  TG  
Sbjct: 11  GRAALGLLAAIGRVALFACAAISHVVRPPVYGREFLNALLQIGWLSLPVVGLTAVFTGGA 70

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+I
Sbjct: 71  LALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+    ++ L+ PR+ A +I +PLL  + +   I G   V         A +    
Sbjct: 131 DALVTLSTHPMKYLVVPRLLAALIVVPLLVAVGDVIGIFGGYFVATGSLGFNPAAYLENT 190

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +I + L+K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 191 VDFLEPLDIVSSLVKGCAFGGIAALMGCFYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250

Query: 362 SLFAIFYFAI 371
            L    +F+I
Sbjct: 251 FLLTGVFFSI 260


>gi|254362425|ref|ZP_04978534.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261494094|ref|ZP_05990597.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496065|ref|ZP_05992475.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153094014|gb|EDN74930.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica PHL213]
 gi|261308315|gb|EEY09608.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261310260|gb|EEY11460.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 258

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 125/253 (49%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I        +    LG              +F+     LI+Q+Y +GV  + +++L    
Sbjct: 5   ISSIGAVVINFIRTLGRSAFMLWGALIGKPEFRKHTPLLIKQLYVLGVQSLLIIMLSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L  +     I G S+V   +  +    F
Sbjct: 125 TEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAIFTAIGIWGGSLVGVDWKGVDGGSF 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +S   ++   +++  G IK+   A A+  +A+  G+     S  + +  T  VV +  ++
Sbjct: 185 WSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFNGYDCVPTSEGISQATTRTVVNASLVI 244

Query: 358 IIIDSLFAIFYFA 370
           + +D +     F 
Sbjct: 245 LGLDFILTAIMFG 257


>gi|224069577|ref|XP_002303003.1| ABC transporter family protein [Populus trichocarpa]
 gi|222844729|gb|EEE82276.1| ABC transporter family protein [Populus trichocarpa]
          Length = 258

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 112/236 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V+   G+    S   K    + ++Q+  VG   V V +L S   G     Q   + ++ G
Sbjct: 16  VLVLAGQVIIRSLMGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLG 75

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ID +R +G D V  
Sbjct: 76  LNRSIGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGADPVDY 135

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  ++LP LT++     +  + ++    Y I   +            +I + +
Sbjct: 136 LVIPRVIASCLALPFLTLMCFTVGMASSGLLADSVYGISLNIILDSAQRALNSWDIISAM 195

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           IK+      I IV+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 196 IKSGVFGAIISIVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFMADFALSYCFFQ 251


>gi|227112741|ref|ZP_03826397.1| hypothetical protein PcarbP_07254 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 260

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|227326638|ref|ZP_03830662.1| hypothetical protein PcarcW_04664 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 260

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|253686687|ref|YP_003015877.1| hypothetical protein PC1_0282 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753265|gb|ACT11341.1| protein of unknown function DUF140 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 260

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISTSAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|53803964|ref|YP_114401.1| hypothetical protein MCA1968 [Methylococcus capsulatus str. Bath]
 gi|53757725|gb|AAU92016.1| conserved hypothetical protein TIGR00056 [Methylococcus capsulatus
           str. Bath]
          Length = 263

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +      LG                   L  LI QMY VGV  + ++++     G 
Sbjct: 11  LGQSALVGIRKLGRAHLFILHVLTGLPGLVARLDLLIVQMYSVGVLSILLIMISGLFVGM 70

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG + LS FGAE     +++   +RE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 71  VLGLQGYYVLSDFGAEESLGVMVAASLVRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 130

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +  +  M +D V+ +I+PR +A ++S+PLL  L +   ++G   V      +    F S+
Sbjct: 131 LSGMEMMAVDPVKRIIAPRYFAGVVSMPLLAALFSIIGVLGGYFVGVGLLGVDEGAFRSQ 190

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             +      +I  G IK+      +  +A+ EG+     S  + +  T  VV S   V+ 
Sbjct: 191 MQAKIDFDEDIVNGFIKSLVFGAVVTWIAVFEGYDATPTSEGVSRATTRSVVYSAFAVLG 250

Query: 360 IDSLFAIFYFA 370
            D +     F 
Sbjct: 251 CDFVLTALMFG 261


>gi|107024236|ref|YP_622563.1| hypothetical protein Bcen_2692 [Burkholderia cenocepacia AU 1054]
 gi|116688439|ref|YP_834062.1| hypothetical protein Bcen2424_0415 [Burkholderia cenocepacia
           HI2424]
 gi|206558708|ref|YP_002229468.1| hypothetical protein BCAL0302 [Burkholderia cenocepacia J2315]
 gi|105894425|gb|ABF77590.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU
           1054]
 gi|116646528|gb|ABK07169.1| protein of unknown function DUF140 [Burkholderia cenocepacia
           HI2424]
 gi|198034745|emb|CAR50612.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 255

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|307824571|ref|ZP_07654796.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
 gi|307734555|gb|EFO05407.1| protein of unknown function DUF140 [Methylobacter tundripaludum
           SV96]
          Length = 260

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 5/258 (1%)

Query: 118 IVKFINDSC----SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +++F+        +    LG       +  +           L+ QM+ +GV    ++ +
Sbjct: 1   MIEFLQQLGIKTRTSFTKLGRGTFFLLQTMSGVLSVLPRPRLLLNQMHSIGVLSFLIITI 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
                G V+  QG + LS FGAE     +++   +RE+G +++A++ AGR+GSA+ AEIG
Sbjct: 61  SGLFVGMVLGLQGYYTLSDFGAEESLGVMVAASLVRELGPVVSALLFAGRAGSALTAEIG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK  E++  +  M +D ++ +ISPR  A  +S+PLL  L +   IIG  +V      + 
Sbjct: 121 LMKATEQLSGMEMMAVDPIKRIISPRFLAGFLSMPLLAALFSAVGIIGGQLVGSGLLGVD 180

Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              ++S+  +      +I  G+IK+         +A+ EG+     S  + +  T  VV 
Sbjct: 181 EGAYWSQMQAKLDFQDDIINGVIKSIVFGFVASWIALFEGYDAIPTSEGVSRATTRTVVN 240

Query: 353 SISIVIIIDSLFAIFYFA 370
           S   ++ +D +     F 
Sbjct: 241 SAFSILGLDFILTTLMFG 258


>gi|225024503|ref|ZP_03713695.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC
           23834]
 gi|224942654|gb|EEG23863.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC
           23834]
          Length = 258

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 1/250 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +      LG          A S      L   IRQ+Y+ GV  + ++ +     G 
Sbjct: 7   LGAKTLDFLQELGKTTLFLFAVLARSGTLLPRLQLGIRQIYFTGVLSIVIIAVSGLFVGM 66

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG  QL++F +      +++   LRE+G +L  ++ A  +G A+ +EIG MK  E+
Sbjct: 67  VLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAGILFASSAGGAMTSEIGLMKTTEQ 126

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           ++A++ M +D V  ++ PR WA +IS+PLL  + N + I GA ++  +Y  +   +F+S+
Sbjct: 127 LEAMKVMAVDPVARVVVPRFWAGVISMPLLASICNVAGIYGAYLIGVRYLGLDGGIFWSQ 186

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             +   +  ++  GLIK+     AI ++A+ +GF        + +  T  VV S   V+ 
Sbjct: 187 MQANIDVGYDVVNGLIKSVVFGVAISLIAVYQGFHCRSTPEGILRASTRTVVSSALTVLA 246

Query: 360 IDSLFAIFYF 369
           +D +     F
Sbjct: 247 LDFVLTAIMF 256


>gi|54310335|ref|YP_131355.1| hypothetical protein PBPRA3247 [Photobacterium profundum SS9]
 gi|46914776|emb|CAG21553.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 260

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I         +   +G           S  + K     L++Q+Y VGV  + ++++    
Sbjct: 6   IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+PLL+++ +   I G  +V   +  I +  F
Sbjct: 126 TEQLSSMEMMAVDPLRQVIAPRFWAGVISMPLLSMMFSAVGIWGGQLVGVDWKGIDYGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++  L  +I   LIK+   A  I  +A+  G+     S  +    T  VV +   
Sbjct: 186 WSVMQASVELGEDIGNSLIKSVVFAITITWIAVFNGYDAVPTSEGISLATTRTVVNASLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTALMFG 259


>gi|256424262|ref|YP_003124915.1| hypothetical protein Cpin_5283 [Chitinophaga pinensis DSM 2588]
 gi|256039170|gb|ACU62714.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588]
          Length = 264

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F  D  +    +G            ++K    +  +IRQ Y VG   + ++ +  
Sbjct: 15  KGIDGFFKDIFNIVLFIG-------RIFKEAFKRPVEIREVIRQCYQVGYKSLALITMTG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F+TG V  +Q    LS+FGA  +   L++I  +R +  L+TA++ AG+ GS+I AE+ SM
Sbjct: 68  FITGLVFTKQSRPSLSEFGATSWLPSLIAIAVIRALAPLVTALICAGKVGSSIGAELASM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           ++ E+IDA+    ++  + L++ R+ A  IS+P+L        ++G+ + I       F 
Sbjct: 128 RVTEQIDAMEVSAINPFKFLVTTRVMATTISIPILVGYTGLVGLLGSFLDIHLNEQTSFT 187

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            FF          +  T  +KA      IG+V+  +G+     +  +GK     VV S+ 
Sbjct: 188 SFFQEAFKNIYFLDFITTGVKAVVFGFTIGVVSCYQGYHATQGTQGVGKAANISVVISMF 247

Query: 356 IVII 359
           ++ I
Sbjct: 248 LIFI 251


>gi|326527561|dbj|BAK08055.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 341

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 111/238 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 94  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 153

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   +  
Sbjct: 154 LHRSVGGVLALALARELTPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGSQPIDY 213

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 214 LVVPRVLACVLALPVLTLISFALGLASSAFLADAVFGVSTSIILESARKALRPWDLISAL 273

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           IK+      I +V+   G      +  +G+  T+ VV S+  + I D   +  +F  G
Sbjct: 274 IKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVISLVGIFIADFALSCLFFQAG 331


>gi|163803754|ref|ZP_02197611.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
 gi|159172438|gb|EDP57307.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
          Length = 263

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +       G           +  +    L  LI+Q+Y VGV  + ++I+  
Sbjct: 7   QFVASLGRRTLDICEAFGRATLMLIGALVTRPQPIKNLPFLIKQLYSVGVQSLAIIIVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYIVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA +V   +  + + 
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDYG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|50119256|ref|YP_048423.1| hypothetical protein ECA0296 [Pectobacterium atrosepticum SCRI1043]
 gi|49609782|emb|CAG73216.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 260

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++I+  
Sbjct: 4   RTLASLGRQGISASASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIIVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|297537487|ref|YP_003673256.1| hypothetical protein M301_0292 [Methylotenera sp. 301]
 gi|297256834|gb|ADI28679.1| protein of unknown function DUF140 [Methylotenera sp. 301]
          Length = 268

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 1/264 (0%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    I K +    +    +   LG            S +        +R++Y  GV  +
Sbjct: 5   NPLVSIIKTLQGIGHRMVERIWRLGAGARLFFLTIVYSGESFKRFHLTMREIYSTGVMSL 64

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++I+ +F  G V+A QG   L ++G+      L+S+  +RE+G ++TA++ AGR+G+AI
Sbjct: 65  LIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVSLSLVRELGPVVTALLFAGRAGTAI 124

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M ++ +  +++PR WA +IS+P+L  L +   I+G  IV   
Sbjct: 125 TAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILATLFSMVGILGGYIVAVP 184

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+  ++    ++I  G+IK+     A  ++A+ EGF     +  + +  T
Sbjct: 185 LIGVDEGAFWSQMQASVDFQSDIVNGIIKSLVFGVACTMIALFEGFDAPPTAEGVSRATT 244

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV S   V+ +D +   F   I
Sbjct: 245 RTVVISSLTVLGLDFVLTSFMLVI 268


>gi|261819643|ref|YP_003257749.1| hypothetical protein Pecwa_0289 [Pectobacterium wasabiae WPP163]
 gi|261603656|gb|ACX86142.1| protein of unknown function DUF140 [Pectobacterium wasabiae WPP163]
          Length = 260

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S +   G              +F+     L++Q+Y VGV  + ++++  
Sbjct: 4   RTLASLGRQGISASAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|330815311|ref|YP_004359016.1| ABC transporter, inner membrane subunit [Burkholderia gladioli
           BSR3]
 gi|327367704|gb|AEA59060.1| ABC transporter, inner membrane subunit [Burkholderia gladioli
           BSR3]
          Length = 255

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ +V  +  +   + +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVVGGLERTGYASRLFVRLVLECFALLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++GAE     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +++PR+WA II++PLL+ +     ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVVAPRMWAGIITMPLLSAIFCAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+   A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVDVWSDVGNGVLKSVVFGFAVTFTALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|29840386|ref|NP_829492.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
 gi|29834735|gb|AAP05370.1| ABC transporter, permease protein, putative [Chlamydophila caviae
           GPIC]
          Length = 263

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 117/253 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +     C     LG  +  T     S    K    S+  Q Y +GV+ +PVV+L   VTG
Sbjct: 10  RIFRVLCLFPLELGRWMGFTCAVIKSCSWKKSLFRSVSLQGYDIGVASLPVVMLTGAVTG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 70  IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A II++P L I A +S I    ++    + +P  V+  
Sbjct: 130 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWSGIFCGYLLCRYAFQLPAQVYLH 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 190 MVSGNVLLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 249

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 250 ANCVITSFFHVLG 262


>gi|254411230|ref|ZP_05025007.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196181731|gb|EDX76718.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 261

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 118/246 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  L   I   G+        K +  + + QM  VG   + + ++ +   GAV   
Sbjct: 9   LGLWLQRLLAAILLGGQVIVHLLGGKIYRRNTLEQMAVVGPDSLTIALITATFIGAVFTI 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q   +   FGA      ++++   RE+  +LTAV+IAGR GSA  AEIG+M++ E+IDA+
Sbjct: 69  QVTREFINFGATTAIGGVLALALSRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQIDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +  D +  L+ PR+ A I+ LPLLTIL+    + G  ++    Y+IP +VF     + 
Sbjct: 129 YMLKTDPIDYLVIPRVIACILMLPLLTILSIILGMTGGVLIAVNLYNIPQSVFLDSARNF 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + ++FT +IKA      I ++    G      +  +G+  TT VV ++  + I +   
Sbjct: 189 LGIWDLFTAMIKAAVFGMLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFITNFFL 248

Query: 365 AIFYFA 370
           +   F 
Sbjct: 249 SWLMFQ 254


>gi|78355070|ref|YP_386519.1| transporter [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78217475|gb|ABB36824.1| transporter, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 250

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 125/217 (57%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +  Q+   G   + +V +I+  TG ++A Q A QL + GA  +  +++S+  ++E+G LL
Sbjct: 34  MWHQLAETGTRSLGIVSVIAACTGMILALQAAQQLEKVGALSYVANMVSVTIVKELGPLL 93

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           TA+++AGRSG+A  AEI +M+I EEIDA+  +G+  VR L+ P++ A++I LP+LT+ A+
Sbjct: 94  TAIILAGRSGAAFCAEISTMQIYEEIDALEVIGISPVRYLVVPKLCAMLIMLPVLTLWAD 153

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              II   +       + F+ + ++        ++ + ++KA     AI ++   +GF  
Sbjct: 154 LVGIISGGLFAALGLGLSFSGYLNQAVYFLGTGDVVSSVVKAAGFGTAITLICCWQGFMA 213

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              +  +G++ T  VVQSI +VI++D  F    +  G
Sbjct: 214 QGGAADVGRRTTKAVVQSIFMVILLDLFFTAINYLAG 250


>gi|82703861|ref|YP_413427.1| hypothetical protein Nmul_A2748 [Nitrosospira multiformis ATCC
           25196]
 gi|82411926|gb|ABB76035.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC
           25196]
          Length = 265

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 2/258 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I    +        LG            S         +IR++Y+ GV  + ++++   
Sbjct: 8   GIQSVGHRVIDSIWRLGYASRFFLLTLIKSGTSLRRFTLVIRELYFTGVQSLIIILVSGL 67

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L ++GAE     ++++  LRE+G +++A++ A R+GSAI AEIG MK
Sbjct: 68  FVGMVLGLQGFETLQRYGAESAVGTMVALSLLRELGPVVSALLFASRAGSAITAEIGLMK 127

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ A+  M +D +  +++PR WA +IS+PLL  L +   I G  +V      +    
Sbjct: 128 ATEQLAAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAIGIYGGYLVAVVLIGVDEGS 187

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+  S      ++  G+IK      A+  +A+ EG+     +  +    T  VV S  
Sbjct: 188 FWSQMQSAVDFRYDVVNGIIKTCVFGIAVTAIAVFEGYDAAPTAEGVSGATTRTVVTSSL 247

Query: 356 IVIIIDSLFAIF-YFAIG 372
            ++ +D +   F +  +G
Sbjct: 248 AILGLDFILTSFMFRGMG 265


>gi|113461315|ref|YP_719384.1| ABC transporter permease [Haemophilus somnus 129PT]
 gi|112823358|gb|ABI25447.1| permease component, possible ABC transporter [Haemophilus somnus
           129PT]
          Length = 261

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I             LG              + +     LI+Q+Y +GV  + +++L  
Sbjct: 3   RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA +IS+P+L ++     I G S++   +  +   
Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLIGVDWKGVDAG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++ + + ++  G IK+   A A+  +A+  G+     S  + K  T  VV + 
Sbjct: 183 SFWSVMQNSVSWSYDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242

Query: 355 SIVIIIDSLFAIFYFAIG 372
            +V+ +D +     F  G
Sbjct: 243 LVVLGLDFVLTALMFGAG 260


>gi|240948315|ref|ZP_04752701.1| permease [Actinobacillus minor NM305]
 gi|240297354|gb|EER47895.1| permease [Actinobacillus minor NM305]
          Length = 258

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/249 (28%), Positives = 125/249 (50%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +       G              +F+     LI+Q+Y VGV  + +++L     G V
Sbjct: 9   GKTTIDIIRAFGRSAFMLWGALIGKPQFRKHSPLLIKQLYVVGVQSLLIIMLSGLFIGMV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++
Sbjct: 69  LGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQL 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V   +  +    F+S  
Sbjct: 129 SSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWSVM 188

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++ + +++  G IK+   A A+  +A+  G+     S  + +  T  VV +  +++ +D
Sbjct: 189 QNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQATTKTVVNASLVILGLD 248

Query: 362 SLFAIFYFA 370
            +     F 
Sbjct: 249 FILTAIMFG 257


>gi|33594617|ref|NP_882261.1| hypothetical protein BP3758 [Bordetella pertussis Tohama I]
 gi|33564693|emb|CAE44015.1| putative membrane protein [Bordetella pertussis Tohama I]
          Length = 261

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G  +   I         LG +++ +G               + +Q++++G   + +
Sbjct: 7   LNGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           + +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ A
Sbjct: 60  IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ A+  M +D +R ++ PR W  II++P+L  + +   I+G  IV     
Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179

Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    F+S+  +    L ++  G+IK+      + +VA+ EG+        +G+  T  
Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV     V+ +D +     F 
Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260


>gi|15602040|ref|NP_245112.1| hypothetical protein PM0175 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720395|gb|AAK02259.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 261

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I +  + + S    +G              +++     LI+Q++ +GV  + +++L  
Sbjct: 3   QFISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIMLSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA +I++P+L I+     I G S+V   +  +   
Sbjct: 123 KATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFTAIGIWGGSLVGVDWKGVDAG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +  T   ++  G IK+   A A+  +A+  G+     S  + K  T  VV + 
Sbjct: 183 SFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHAS 242

Query: 355 SIVIIIDSLFAIFYFA 370
            +V+ +D +     F 
Sbjct: 243 LVVLGLDFVLTALMFG 258


>gi|300777429|ref|ZP_07087287.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300502939|gb|EFK34079.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 253

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 120/248 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S     G +   T  +    ++    +  L+ Q Y +G   + ++ +  F+ G V+  
Sbjct: 4   IRSFLQETGNIAQFTKNYFLLGFRPPYEIKELLAQCYLIGYKSLGLISMTGFIIGLVLTM 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L ++G E     ++ I  +REI  ++ A++ AG+  S+I AE+GSM++ E+IDA+
Sbjct: 64  QLRPSLVRYGVESQLPVMVGIAIIREIAPVIAALIFAGKIASSIGAELGSMRVTEQIDAM 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
              G    + L++ R+ A    LP+L ILA+  ++ GA I +        ++F+S+   +
Sbjct: 124 EVSGTHPFKYLVATRVLATTFMLPVLIILADAISLYGAWIGVNIGGTTSLSLFYSQVFDS 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++I    IK+ F   A+GIV   +G+     +  +G    + VV S  ++ ++D + 
Sbjct: 184 LDFSDIIPAFIKSFFFGFAVGIVGAYKGYNAVKGTRGVGNAANSAVVLSSILIFVLDLIA 243

Query: 365 AIFYFAIG 372
                 +G
Sbjct: 244 VQITGILG 251


>gi|126728696|ref|ZP_01744511.1| membrane protein [Sagittula stellata E-37]
 gi|126710626|gb|EBA09677.1| membrane protein [Sagittula stellata E-37]
          Length = 260

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 109/251 (43%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                      +G V        + + +   +       M  VG   +PVV L +F TGA
Sbjct: 10  LGRALLHWLAAIGRVTRFGLTALSHTLRPPFYAGEFGAAMMNVGWLSLPVVGLTAFFTGA 69

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
            +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+
Sbjct: 70  ALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQ 129

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+ T+  + ++ L++PR+ A ++ +P L  + +   + G   V         A +   
Sbjct: 130 IDALTTLSTNPMKYLVAPRLLAALLVVPALVGIGDVIGVFGGYAVATGSLGFNPAAYLKN 189

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   ++ + L+K         ++    G   G  +  +G+     V  +  +++  
Sbjct: 190 TVDFLEPLDVISSLVKGCAFGGIAALMGCYFGMMSGRGAQGVGRATKGSVEAAAVLILAA 249

Query: 361 DSLFAIFYFAI 371
           + L    +F++
Sbjct: 250 NFLLTGAFFSL 260


>gi|116310403|emb|CAH67412.1| OSIGBa0143N19.6 [Oryza sativa Indica Group]
          Length = 345

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 99  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  A++G+M+++E+ D +R +G   V  
Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAKLGTMQVSEQTDTLRVLGAQPVDY 218

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334


>gi|157372592|ref|YP_001480581.1| hypothetical protein Spro_4359 [Serratia proteamaculans 568]
 gi|157324356|gb|ABV43453.1| protein of unknown function DUF140 [Serratia proteamaculans 568]
          Length = 260

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        + +   G              + +     L++QM+ VGV  + ++++  
Sbjct: 4   QALASLGRRGINTSASFGRAGLMLWGALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT++     I G SIV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTLIFVAIGIWGGSIVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   L+K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|270159893|ref|ZP_06188549.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968]
 gi|289165353|ref|YP_003455491.1| toluene transporter subunit: membrane component of ABC superfamily
           [Legionella longbeachae NSW150]
 gi|269988232|gb|EEZ94487.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968]
 gi|288858526|emb|CBJ12407.1| toluene transporter subunit: membrane component of ABC superfamily
           [Legionella longbeachae NSW150]
          Length = 260

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 1/253 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I +  +        LG                      +  Q+Y+VGV    ++I+ +
Sbjct: 3   EFITRIGSRGSRILQDLGSSGIFLFLMLFRKPDISKLWSLVRYQIYFVGVLSCLIIIVSA 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L +FGA      L+++   RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  MG+D +  +I PR  A  I+LPLL ++ +  A+ G   +   +  +   
Sbjct: 123 KATEQLSSMDMMGVDPLGRVIYPRFLAGFIALPLLALIFSAVAVFGGYFIGVHWLGVDAG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++ +G+IK+   A  +  +++ +GF     +  + +  T  VV S 
Sbjct: 183 SFWSNMQAAVDFRIDVLSGIIKSLVFAFVVTWISVFQGFECVPTAEGISQATTKTVVYSS 242

Query: 355 SIVIIIDSLFAIF 367
             V+ +D L    
Sbjct: 243 LAVLGLDFLLTAM 255


>gi|238793703|ref|ZP_04637325.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909]
 gi|238726944|gb|EEQ18476.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909]
          Length = 260

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|126668782|ref|ZP_01739730.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter sp. ELB17]
 gi|126626765|gb|EAZ97414.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter sp. ELB17]
          Length = 259

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I +   ++       G              K    L  L++Q+Y VGV  + +V++   
Sbjct: 3   AIARLGKNTLDFLASFGRASQFLLGVLVGVPKPSVGLPLLLKQIYSVGVLSLVIVVVSGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS FG+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLGLQGYTILSDFGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +I+PR+WA  +S+P+L ++ +   I+G  +V  ++  +    
Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFLSMPILALVFSMVGILGGMLVGVEWLGVFEGS 182

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    ++     ++  G+IK+         +A+ +G+     S  +    T  VV S  
Sbjct: 183 FWGNMQASVDFRDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 242

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 243 AVLGLDFILTAVMFG 257


>gi|125549278|gb|EAY95100.1| hypothetical protein OsI_16916 [Oryza sativa Indica Group]
          Length = 345

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 99  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 218

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334


>gi|78064990|ref|YP_367759.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
 gi|77965735|gb|ABB07115.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
          Length = 255

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERTGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|83647976|ref|YP_436411.1| organis solvents resistance ABC transporter permease [Hahella
           chejuensis KCTC 2396]
 gi|83636019|gb|ABC31986.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Hahella chejuensis KCTC
           2396]
          Length = 259

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +   +       LG            + + KG    L++Q+Y VGV  + ++++    
Sbjct: 5   LQRLGRNGLLSLGALGRAGIFLVGSLLGAPRMKG-FPLLLKQLYSVGVLSLVIIVVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 64  IGMVLGLQGYNILVDYGSEQAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMKA 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  MG+D +R +I+PR+ A  I++P+L ++ +   + G  +V  ++  +    F
Sbjct: 124 TEQLSSLEMMGVDPLRQIIAPRLLAGFIAMPMLAMIFSVVGVWGGKMVGVEWLGVYEGSF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++   + +I  G+IK+         +A+ +G+     S  +    T  VV S   
Sbjct: 184 WSNMQASVDFSDDILNGIIKSIVFGVVCTWIAVFQGYDSVPTSEGISSATTKTVVYSSLA 243

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 244 VLGLDFILTAVMFG 257


>gi|225164012|ref|ZP_03726299.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Opitutaceae bacterium
           TAV2]
 gi|224801394|gb|EEG19703.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Opitutaceae bacterium
           TAV2]
          Length = 258

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +    N +      LG +   TG+   S+   +     + R +Y  G+  VPV++++   
Sbjct: 2   LRTLGNHTLLTIQELGDLAQFTGKAFTSAIGSRKLSRRIFRAIYEQGIRCVPVILIVGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG V+  QG   L++FGA      L+S+  +RE+G +LTA+M+ G++GSA+ AE+G  + 
Sbjct: 62  TGLVLGLQGYHVLNRFGASGMLGTLVSLTLVRELGPVLTALMLVGQAGSALAAELGIQRN 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E+IDA+ TMG D    LISPR+ A +I  P+ T       + G  +       +   V+
Sbjct: 122 SEQIDALETMGADAHAYLISPRLIAALIVYPIHTAFFCLIGMFGGYLSGSVVLPLEPGVY 181

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352
           +S   +     ++    +KA         +    GF          + ++G   T  VV 
Sbjct: 182 WSSIDAAVQGGDVRECFLKAAIFGLLTIAICAHNGFNAHRRRSVTGARAVGASTTRAVVI 241

Query: 353 SISIVIIIDSLFAIFY 368
           S   V+  D +   F 
Sbjct: 242 SCITVLAADYVITSFL 257


>gi|149378023|ref|ZP_01895747.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter algicola
           DG893]
 gi|149357678|gb|EDM46176.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Marinobacter algicola
           DG893]
          Length = 259

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++  F     S    LG          A   +       L++Q+Y VGV  + ++++   
Sbjct: 3   RLAAFGRLGMSVIASLGRSGRFLVGALAGVPRPSVGFPLLLKQLYSVGVLSLAIIVVSGL 62

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   LS +G+E     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 63  FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  MG+D +R +I+PR+WA  IS+P+L  + +   I G  +V  ++  +    
Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFISVPVLAAVFSVVGIWGGMLVGVEWLGVFEGS 182

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+    S+ +   ++  G++K+         +A+ +G+     S  +    T  VV S  
Sbjct: 183 FWGNMQSSVSFTADVLNGVVKSLVFGFVCTWIAVYQGYDCVPTSAGISAATTKTVVYSSL 242

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 243 AVLGLDFVLTAVMFG 257


>gi|238785100|ref|ZP_04629095.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970]
 gi|238796191|ref|ZP_04639701.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC
           43969]
 gi|238713992|gb|EEQ06009.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970]
 gi|238719884|gb|EEQ11690.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|197287459|ref|YP_002153331.1| hypothetical protein PMI3656 [Proteus mirabilis HI4320]
 gi|194684946|emb|CAR47136.1| putative membrane protein [Proteus mirabilis HI4320]
          Length = 259

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    S S     G              +F+     L++Q+Y VGV  + ++++    
Sbjct: 5   LARLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+I ++  M +D +R +++PR WA  IS+PLL+++     I G +IV   +  I    F
Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           ++          ++    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 245 VLGLDFVLTALMFG 258


>gi|186477517|ref|YP_001858987.1| hypothetical protein Bphy_2769 [Burkholderia phymatum STM815]
 gi|184193976|gb|ACC71941.1| protein of unknown function DUF140 [Burkholderia phymatum STM815]
          Length = 255

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +   A +   ++                   + +Q+++VG   + 
Sbjct: 1   MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++++++PR+WA II++P+L  + +   +IG  IV    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAVGVIGGYIVGVLM 173

Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+         ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|156975891|ref|YP_001446798.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116]
 gi|156527485|gb|ABU72571.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116]
          Length = 263

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + +     G           +  +    L  LI+Q+Y VGV  + ++++  
Sbjct: 7   QFVASLGRRTLAICEAFGRATLMLVGALVTRPQPIKNLPLLIKQLYSVGVQSLAIIVVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA +V   +  +   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|223937293|ref|ZP_03629199.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894078|gb|EEF60533.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 244

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 2/236 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G ++        S             Q + +G + + +V ++SF  G VIA      L 
Sbjct: 5   IGELMLLFWRTVRSLPLVWRQRQKTFDQFFEIGNASLLMVCILSFFIGGVIALLTGPVLV 64

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G       L+ I   +E+  ++ +++IAGR GS++ AEIGSM++ +EIDA+RTM ++ 
Sbjct: 65  ERGLTNSVGGLVGISMAKELAPVMMSILIAGRIGSSMTAEIGSMRVYQEIDALRTMNINP 124

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI--PFAVFFSRFHSTATLAN 309
           +  L+ PR+ A+ ++LPLL I +      G ++V    + I   F  FF+         +
Sbjct: 125 IHYLVLPRLTAIAVALPLLVIFSILVGWGGGALVSALNHKIAVSFQAFFTNLREVVDFGD 184

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +  GL+K+   A  IG+V   +G         +G+ VT  VV  I +++I+D    
Sbjct: 185 VINGLVKSFIFALVIGVVCCHQGLQTIGGPRGIGRSVTKAVVNCIVLIVILDYFLT 240


>gi|268590740|ref|ZP_06124961.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rettgeri DSM 1131]
 gi|291313512|gb|EFE53965.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rettgeri DSM 1131]
          Length = 260

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F           G              +F+     L++Q+Y +GV  + ++ +  
Sbjct: 4   KAIAAFGRRWIDIFSAFGRAGYMLFRALLGKPEFRKQWPLLMKQLYAIGVQSLLIIAVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I+G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+     ++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWASMQSSVDWRLDLVNCVIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LSVLGLDFVLTALMFG 259


>gi|312888834|ref|ZP_07748397.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311298709|gb|EFQ75815.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 267

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 113/231 (48%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
               F    +        +++Q Y VGV  + ++ +  F+ G +  +Q    LS+FGA  
Sbjct: 33  FVLRFFKEVFFPPYEFKEILKQCYDVGVKSLLLISVTGFIVGVIFTKQSRPSLSEFGATS 92

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           +   L+SI  LR +  L+TA++ AG+ GS+I AE+GSM++ E+IDA+   G    + L+ 
Sbjct: 93  WLPSLVSIAILRALASLVTALIAAGKVGSSIGAELGSMRVTEQIDAMEVSGTKPFKYLVC 152

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            R+ A  I++PLL     F A++G  + + +     +  F  +     T  + ++ L K+
Sbjct: 153 TRVLATTITIPLLASYTAFIALLGGYLNVSQNEGTSYTTFMEQVFEPLTFIDFWSTLAKS 212

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                 IGIV   +G+     +  +GK     VV ++ +V I + +    +
Sbjct: 213 IMFGFTIGIVGCYQGYNSSRGTEGVGKAANAAVVTAMFLVFIEEVIIVQIF 263


>gi|293394224|ref|ZP_06638524.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291423202|gb|EFE96431.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 260

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +  F     + +   G              + +     L++Q++ VGV  + ++++  
Sbjct: 4   QALASFGRRGINTSAAFGRAGLMLWGALVGRPEPRRQWPLLVKQLHSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R + +PR WA +IS+PLLTI+     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIAAPRFWAGLISMPLLTIIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRQDLLNCLIKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|170731749|ref|YP_001763696.1| hypothetical protein Bcenmc03_0394 [Burkholderia cenocepacia MC0-3]
 gi|254246538|ref|ZP_04939859.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184]
 gi|124871314|gb|EAY63030.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184]
 gi|169814991|gb|ACA89574.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3]
          Length = 255

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|257465526|ref|ZP_05629897.1| permease [Actinobacillus minor 202]
 gi|257451186|gb|EEV25229.1| permease [Actinobacillus minor 202]
          Length = 260

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/249 (28%), Positives = 125/249 (50%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +       G              +F+     LI+Q+Y VGV  + +++L     G V
Sbjct: 9   GKTTIDIIRAFGRSAFMLWGALIGKPQFRKHSPLLIKQLYVVGVQSLLIIMLSGLFIGMV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++
Sbjct: 69  LGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQL 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V   +  +    F+S  
Sbjct: 129 SSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWSVM 188

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            ++ + +++  G IK+   A A+  +A+  G+     S  + +  T  VV +  +++ +D
Sbjct: 189 QNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQATTKTVVNASLVILGLD 248

Query: 362 SLFAIFYFA 370
            +     F 
Sbjct: 249 FILTAIMFG 257


>gi|28899437|ref|NP_799042.1| ABC transporter [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839285|ref|ZP_01991952.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810]
 gi|260363394|ref|ZP_05776246.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260879329|ref|ZP_05891684.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260895712|ref|ZP_05904208.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260900285|ref|ZP_05908680.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28807673|dbj|BAC60926.1| putative ABC superfamily transport protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149747186|gb|EDM58174.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810]
 gi|308087410|gb|EFO37105.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308093131|gb|EFO42826.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308107579|gb|EFO45119.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308111178|gb|EFO48718.1| organic solvent ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|328471426|gb|EGF42321.1| ABC transporter [Vibrio parahaemolyticus 10329]
          Length = 263

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 1/262 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +     + +      + +     G           S  +       LI+Q+Y VGV  + 
Sbjct: 1   MVASFIQFVASLGRRTLAICEAFGRATLMLVGAIFSKPQPSKSFPLLIKQLYSVGVQSLA 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++++     G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ 
Sbjct: 61  IIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALT 120

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA +V   +
Sbjct: 121 AEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDW 180

Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F++   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T 
Sbjct: 181 KGVDHGSFWAAMQSSVELGQDIGNSMIKCFVFAITVTWIALFNGYDAIPTSEGISRATTR 240

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV S   V+ +D +     F 
Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262


>gi|123443934|ref|YP_001007905.1| hypothetical protein YE3751 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090895|emb|CAL13777.1| putative membrane protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 260

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|332163079|ref|YP_004299656.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667309|gb|ADZ43953.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862752|emb|CBX72894.1| UPF0393 inner membrane protein yrbE [Yersinia enterocolitica
           W22703]
          Length = 260

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAVTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|238764271|ref|ZP_04625223.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC
           33638]
 gi|238697552|gb|EEP90317.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC
           33638]
          Length = 260

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCVSFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|220905696|ref|YP_002481007.1| hypothetical protein Cyan7425_0250 [Cyanothece sp. PCC 7425]
 gi|219862307|gb|ACL42646.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425]
          Length = 248

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 1/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+        +    + + QM  VG   + V ++ +   G V   Q A +   F
Sbjct: 3   AAFLLGGQVFVHLLMGRINRRNTLEQMSVVGPESLLVALITATFVGMVFTIQVAREFINF 62

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA      +++I   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D V 
Sbjct: 63  GAVSAVGGVLAIALTRELAPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALYLLSTDPVD 122

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR  A  + LP+LT+LA  +A+ G  ++    Y IPF++F     S   L +I++ 
Sbjct: 123 YLVLPRFLACCLMLPVLTLLALVTAMGGGMLLAESLYGIPFSLFLDSAKSFLELWDIWSA 182

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
           ++K+      + I+    G      +  +G+  T  VV S+  + I D   + + +   G
Sbjct: 183 VLKSIVFGALVAIIGCNWGLTTSGGAKGVGQSTTAAVVISLLSIFIADFFLSWVMFHGTG 242


>gi|254251295|ref|ZP_04944613.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158]
 gi|124893904|gb|EAY67784.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158]
          Length = 386

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 131/240 (54%), Gaps = 2/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
            VI +                     +Y  G   +P+  L++F+ G V++   A QL  F
Sbjct: 148 RVILDALSVLRRPQTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYLSAQQLQMF 205

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA  + ++++ +  +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+    
Sbjct: 206 GANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGL 265

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            LI PR+ AL +++PLL +  N  A+ G ++       I    F         +AN++ G
Sbjct: 266 RLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPIANLYIG 325

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           L K       I +VA   GF +  +S SLG+  TT VV SI++VI+ D++FAI +  +G+
Sbjct: 326 LGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 385


>gi|149925791|ref|ZP_01914055.1| ABC-type transporter, permease component involved in toluene
           tolerance [Limnobacter sp. MED105]
 gi|149825908|gb|EDM85116.1| ABC-type transporter, permease component involved in toluene
           tolerance [Limnobacter sp. MED105]
          Length = 261

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 130/266 (48%), Gaps = 8/266 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   +G  ++  I      A  +G +     +              +I Q++++G  
Sbjct: 3   PIALVSRLGAGVIATIAGLGVFARFVGNLFMLLPKALFRP-------RLVIDQIHFIGNY 55

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG + L+++GAE     L+++  +RE+G +++A++ AGR+G+
Sbjct: 56  SLVIIVVSGLFVGFVLGLQGYYTLNRYGAEQALGLLVALSLVRELGPVVSALLFAGRAGT 115

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D    +++PR  A +ISLPLL  L +   I G  +V 
Sbjct: 116 SLTAEIGLMKAGEQLTAMEMMAVDPKARIVAPRWIAGLISLPLLAGLFSAVGIFGGYVVG 175

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  +   +  +I  G+IK+     A+  +A+ +G+A       + + 
Sbjct: 176 VLLIGVDSGAFWSQMQAGVDVRDDILNGVIKSVVFGVAVSSIALFQGYACQPTPEGVSRA 235

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
            T  VV S   ++ +D +     F+I
Sbjct: 236 TTRTVVISSLTILGLDFVLTALMFSI 261


>gi|42525130|ref|NP_970510.1| ABC-type organic solvent resistance transport system, permease
           protein [Bdellovibrio bacteriovorus HD100]
 gi|39577341|emb|CAE81164.1| ABC-type organic solvent resistance transport system, permease
           protein [Bdellovibrio bacteriovorus HD100]
          Length = 239

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 1/238 (0%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           +I+   E     +          +Q+++VG   + +V+        V   + +F +    
Sbjct: 1   MITLIAETLTGVFTPPFRRKEFFQQLHFVGNKSLFIVVFCVCFAAIVTILESSFHMKMVI 60

Query: 195 A-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
             +       ++L LRE+G ++TA++++ R G+   +E+GSM+I E++DA++ +G+D V 
Sbjct: 61  QNDSMVPGFAAVLILRELGAIVTALLLSSRVGAGYASEVGSMQITEQVDALKMLGIDPVN 120

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR  A ++   ++T++AN + I  A  V   Y      +F +         ++   
Sbjct: 121 YLVVPRFLACVLGAMMITVVANMACIFSAMAVSQFYLGYTPGMFLTSMQRFVDFKDLIFA 180

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +IK       I +VA   GF     +  +G+  T  VV S   +I+ID + +  +  +
Sbjct: 181 MIKGACFGGVIPLVACYFGFRCQQGAEGVGRATTNTVVVSSIAIIVIDFILSYTFSYL 238


>gi|33598744|ref|NP_886387.1| hypothetical protein BPP4258 [Bordetella parapertussis 12822]
 gi|33603818|ref|NP_891378.1| hypothetical protein BB4845 [Bordetella bronchiseptica RB50]
 gi|33574874|emb|CAE39537.1| putative membrane protein [Bordetella parapertussis]
 gi|33577943|emb|CAE35208.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 261

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              +G  +   I         LG +++ +G               + +Q++++G   + +
Sbjct: 7   LSGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           + +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ A
Sbjct: 60  IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           EIG MK  E++ A+  M +D +R ++ PR W  II++P+L  + +   I+G  IV     
Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179

Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            +    F+S+  +    L ++  G+IK+      + +VA+ EG+        +G+  T  
Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239

Query: 350 VVQSISIVIIIDSLFAIFYFA 370
           VV     V+ +D +     F 
Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260


>gi|170717850|ref|YP_001784909.1| hypothetical protein HSM_1589 [Haemophilus somnus 2336]
 gi|168825979|gb|ACA31350.1| protein of unknown function DUF140 [Haemophilus somnus 2336]
          Length = 261

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 1/258 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I             LG              + +     LI+Q+Y +GV  + +++L  
Sbjct: 3   RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +ISPR WA +IS+P+L ++     I G S+V   +  +   
Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDAG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   ++ +   ++  G IK+   A A+  +A+  G+     S  + K  T  VV + 
Sbjct: 183 SFWSVMQNSVSWGYDLLNGCIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242

Query: 355 SIVIIIDSLFAIFYFAIG 372
            +V+ +D +     F  G
Sbjct: 243 LVVLGLDFVLTALMFGAG 260


>gi|323343316|ref|ZP_08083543.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella oralis ATCC 33269]
 gi|323095135|gb|EFZ37709.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella oralis ATCC 33269]
          Length = 260

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 1/249 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I  +       G  +   G   +   + + F    +++M  +G+  + +V+LISF  GAV
Sbjct: 12  IKLTYRYLTTFGRYLILMGRSFSRPERMRMFFKQYVKEMSQLGIDSIGIVLLISFFIGAV 71

Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++
Sbjct: 72  ICIQMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 131

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I  L+  +P L I ++ + I+GA    +  + +        
Sbjct: 132 IDALDIMGVNSASYLILPKIMGLVTIMPFLVIFSSLTGILGAYGTAYIGHILTPEDLTLG 191

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              +     ++  +IK+ F A  I  V+   G++V   S  +GK  T  VV S  +++  
Sbjct: 192 LQHSFNPWFVWMSIIKSLFFAFIIASVSSYFGYSVEGGSVEVGKASTDAVVSSSVLILFS 251

Query: 361 DSLFAIFYF 369
           D        
Sbjct: 252 DVFLTQLLS 260


>gi|255037710|ref|YP_003088331.1| hypothetical protein Dfer_3962 [Dyadobacter fermentans DSM 18053]
 gi|254950466|gb|ACT95166.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM
           18053]
          Length = 242

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G      G       K   +   L+ +   +GVS + +V ++S   GAV   Q A+
Sbjct: 1   MSVIGKYFIFLGTLFGKGEKLSVYWRRLMEECVGIGVSSIFIVAIVSTFIGAVSCIQTAY 60

Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L      I ++ L+     + E+   +T +++AG+ GS I +E+G+M+I E+IDA+  M
Sbjct: 61  NLVSPIIPISTVALIVRDMEILELAPTITCIVLAGKVGSNIASELGTMRITEQIDALEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    L+ P++ A +++ P+L I + F  I+G  +       I    +      +   
Sbjct: 121 GINSSSYLVLPKVVAAMLTFPMLVIFSAFLGILGGYLAGTLTGVITERDYLYGIRDSFVP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            NIF   +K       I  ++  +GF     +  +GK  T  V  S   +++ D L A  
Sbjct: 181 YNIFFMCVKPFVFGFLIASISSFKGFFTSGGALEVGKASTQAVTNSCISILVADYLLAQL 240

Query: 368 YF 369
             
Sbjct: 241 LL 242


>gi|227358279|ref|ZP_03842620.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Proteus mirabilis ATCC 29906]
 gi|227161615|gb|EEI46652.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Proteus mirabilis ATCC 29906]
          Length = 259

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    S S     G              +F+     L++Q+Y VGV  + ++++    
Sbjct: 5   LAQLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+I ++  M +D +R +++PR WA  IS+PLL+++     I G +IV   +  I    F
Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           ++          ++    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 245 VLGLDFVLTALMFG 258


>gi|260914439|ref|ZP_05920908.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Pasteurella dagmatis ATCC
           43325]
 gi|260631540|gb|EEX49722.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Pasteurella dagmatis ATCC
           43325]
          Length = 260

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
               +      LG              + K     L++Q++ +GV  + +++L     G 
Sbjct: 8   LGRSAIDFCRSLGRAGFMLFGALVGKPQIKKHFPLLVKQLHVLGVQSLLIIMLSGLFIGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 68  VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V   +  +    F+S 
Sbjct: 128 LSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWSV 187

Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             +  T   ++  G IK+   A A+  +A+  G+     S  + K  T  VV +  +V+ 
Sbjct: 188 MQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCLPTSEGISKATTRTVVHASLVVLG 247

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 248 LDFVLTALMFG 258


>gi|300113019|ref|YP_003759594.1| hypothetical protein Nwat_0303 [Nitrosococcus watsonii C-113]
 gi|299538956|gb|ADJ27273.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113]
          Length = 260

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +++           LG      G+   S          LI Q+Y VGV  +P++++  
Sbjct: 3   EALLRLGRWGLGTFERLGRGHLFLGQLLLSIAALLLRFPLLITQVYSVGVLTLPIIVVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FGAE     ++S+  +RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 63  AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++  +  M +D VR + +PR +A   S+PLL  + +   ++G   V      +   
Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  ++     ++  G+IK+      +  +A+ EG+     S+ +G+  T  VV S 
Sbjct: 183 AFWSQMQASTDWEEDVLNGVIKSIVFGIVVTWIAVFEGYDTVPTSDGVGRATTRTVVHSA 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 FAVLALDFVLTALMFG 258


>gi|119511793|ref|ZP_01630895.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414]
 gi|119463566|gb|EAW44501.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414]
          Length = 257

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 113/237 (47%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             +   G+      + K +   +++ M   G + V  VIL+S   G +   Q A +L +F
Sbjct: 17  AAVLLFGQVLLHLLQGKTYYRKILQHMVTAGPASVSPVILVSGFAGMIFTIQTARELVRF 76

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA        ++   RE+  LLTA +IAG+ GSA  AEIG+M++ E+IDA+  +  + + 
Sbjct: 77  GALDAVGGAFALAFCRELAPLLTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTNPID 136

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A I+ +P++ + A    I G      ++Y++    F     S   L+++F  
Sbjct: 137 YLVLPRVIACILMMPIMMVFALIVGISGGVFAASQFYNVDPEAFLESVRSFLQLSDLFMV 196

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           L+K       + I     G      +  +G+  TT VV +  ++ ++D   ++  F 
Sbjct: 197 LVKGLIFGAIVAINGCSWGLTTKGGAKEVGESATTAVVTTWVLIFMMDFFLSLLMFE 253


>gi|77166237|ref|YP_344762.1| hypothetical protein Noc_2785 [Nitrosococcus oceani ATCC 19707]
 gi|254435217|ref|ZP_05048724.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
 gi|76884551|gb|ABA59232.1| Protein of unknown function DUF140 [Nitrosococcus oceani ATCC
           19707]
 gi|207088328|gb|EDZ65600.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
          Length = 260

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +++           LG      G+   S          LI Q+Y VGV  +P++++  
Sbjct: 3   EALLRLGRWGLGTFERLGRGHLFLGQLLLSIATLLLRFPLLITQVYSVGVLTLPIIVVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FGAE     ++S+  +RE+G +++A++ AGR+GSA+ AEIG M
Sbjct: 63  AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++  +  M +D VR + +PR +A   S+PLL  + +   ++G   V      +   
Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  ++     ++  G+IK+      +  +A+ EG+     S+ +G+  T  VV S 
Sbjct: 183 AFWSQMQASTDWKEDVLNGVIKSIVFGIVVTWIAVFEGYDAVPTSDGVGRATTRTVVHSA 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 FAVLALDFVLTALMFG 258


>gi|37521379|ref|NP_924756.1| hypothetical protein glr1810 [Gloeobacter violaceus PCC 7421]
 gi|35212376|dbj|BAC89751.1| glr1810 [Gloeobacter violaceus PCC 7421]
          Length = 255

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 114/233 (48%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
              G+      + +    + + Q+  VG   V V ++ +   G V   Q A +   FGA 
Sbjct: 12  LLAGQVLIHLLRGRIHWRNTVDQLSVVGTESVLVAVITAITIGMVFTIQVAREFISFGAS 71

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
                +++I   RE+  +LTAV+IAGR GSA  AE+G+M++ E+IDA+  +  D +  L+
Sbjct: 72  SAIGGVLAIALTRELAPVLTAVIIAGRVGSAFAAEVGTMRVTEQIDALEVLRTDPIDYLV 131

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
           +PR+ A  + LP+LTI+A+ + + G   +  + Y I   ++     +     ++ +GLIK
Sbjct: 132 TPRVIACAVMLPVLTIVADVTGLAGGLFITTQLYGISATLYLDSARNLLESWDMISGLIK 191

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           A      I ++    G      +  +G   T  VV ++  + I++ + +   F
Sbjct: 192 AGIFGVLIALIGTNWGLTTTGGARGVGNSTTQSVVTALLTIFIVNFILSALMF 244


>gi|238751354|ref|ZP_04612847.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380]
 gi|238710412|gb|EEQ02637.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380]
          Length = 260

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGIKVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGAVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|254509100|ref|ZP_05121202.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio parahaemolyticus
           16]
 gi|219547981|gb|EED25004.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Vibrio parahaemolyticus
           16]
          Length = 263

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 1/262 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +  H+   +      + S     G          AS  +    L  LI+Q+Y VGV  + 
Sbjct: 1   MMAHLTDFVASTGRRALSVIASFGRASLMLFGALASRPQPIANLPLLIKQLYSVGVQSLL 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++L     G V++ QG   L  FGAE     ++++  LRE+G ++TA++ AGR+GSA+ 
Sbjct: 61  IIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I G  +V   +
Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDW 180

Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             I    F++   S+  L  +I   +IK+   A  +  +A+  G+     S  + +  T 
Sbjct: 181 KGIDHGSFWAAMQSSVELGQDIGNSMIKSLAFAITVTWIALFNGYDAIPTSEGISRATTR 240

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV S   V+ +D +     F 
Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262


>gi|284008692|emb|CBA75353.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 261

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      S +     G              +F      LI+Q+Y VG+  + ++ +    
Sbjct: 7   LTALGRRSLAVVATFGRAGYLLFRALFGKPEFAKQWPLLIKQLYNVGILSLLIIAVSGLF 66

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 67  IGMVLGLQGYLVLTMFSAESSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 126

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+I ++  M +D +R +I+PR WA +IS+PLL ++     I+G ++V   +  I    F
Sbjct: 127 TEQISSLEMMAVDPLRRVIAPRFWAGLISMPLLALIFVAVGILGGALVGVDWKGIDEGFF 186

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S      +I    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 187 WSSMQSAIEWKKDILNCFIKSVVFAFTVSWIALFNGYDAIPTSEGISRATTRTVVHSSLA 246

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 247 VLGLDFVLTALMFG 260


>gi|190150611|ref|YP_001969136.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189915742|gb|ACE61994.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 276

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 124/253 (49%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I    +         G              +F+     LI+Q+Y +GV  + +++L    
Sbjct: 23  ISGIGSTVIDFIRAFGRATFMLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLF 82

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 83  IGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 142

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L  +     I G S+V   +  +    F
Sbjct: 143 TEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSF 202

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +S   ++   +++  G IK+   A A+  +A+  G+     S  + +  T  VV +  +V
Sbjct: 203 WSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVV 262

Query: 358 IIIDSLFAIFYFA 370
           + +D +     F 
Sbjct: 263 LGLDFILTAIMFG 275


>gi|318604041|emb|CBY25539.1| uncharacterized ABC transporter, permease component YrbE [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 260

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|258592962|emb|CBE69271.1| toluene transporter subunit: membrane component of ABC superfamily
           [NC10 bacterium 'Dutch sediment']
          Length = 256

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 128/256 (50%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G  +         Q  ++G +    G     +         ++ Q+Y++GV    +++L
Sbjct: 1   MGNPLEAVGRTVLKQVRMMGHMAIFLGSTGLWAVLPPLKFRRIVSQIYFIGVKSSSIILL 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
            +  +G V+  QG + L +FG+E      + +  +RE+G ++ A+M+A R+GSA  AEIG
Sbjct: 61  TAAFSGMVLGLQGYYTLRKFGSEALLGPAVGLSLIRELGPVMAALMVAARAGSASAAEIG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M+I E+IDA+  M ++ V+ L+ P++ A +IS+PLLT + +   I G  +V  K   + 
Sbjct: 121 IMRITEQIDALEAMAVNPVKHLVVPKVVAGLISVPLLTAIFDVVGIFGGYLVGVKMLGVG 180

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +FS   +   +++I  G +K+      +  V   +GF  G  +  +GK  T  VV S
Sbjct: 181 AGTYFSEMRNMVEMSDIQGGFLKSLSFGLIVTWVCTYKGFYTGYGAEGVGKATTEAVVLS 240

Query: 354 ISIVIIIDSLFAIFYF 369
             +V++ +       F
Sbjct: 241 SVLVLVWNYFMTAVLF 256


>gi|319791928|ref|YP_004153568.1| hypothetical protein Varpa_1241 [Variovorax paradoxus EPS]
 gi|315594391|gb|ADU35457.1| protein of unknown function DUF140 [Variovorax paradoxus EPS]
          Length = 260

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 118/253 (46%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  S    LG              +       +  Q++++G   + ++ +     G
Sbjct: 8   DVGFAVRSHLANLGYGAKLFMRLLGPGAQIMRRFSLVRDQIHFLGNYSLAIIGVSGLFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  Q  + L ++G+      L+++  +RE+G ++ A++  GR+G+++ AEIG MK +E
Sbjct: 68  FVLGLQMYYALQRYGSSEALGLLVTLSLVRELGPVVAALLFTGRAGTSLTAEIGLMKADE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M +D V+ +++PR WA +I++PLL  + +   I+G  +V      +    F+ 
Sbjct: 128 QLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLGVDPGAFWG 187

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +      +  ++  G+IK+      +  +A+ +G++       + +  T  VV +   V+
Sbjct: 188 QMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQGYSAQPTPEGVSRATTRTVVTASLAVL 247

Query: 359 IIDSLFAIFYFAI 371
            +D L     F+I
Sbjct: 248 GLDFLLTAMMFSI 260


>gi|145588286|ref|YP_001154883.1| hypothetical protein Pnuc_0097 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046692|gb|ABP33319.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 265

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 5/259 (1%)

Query: 117 KIVKFINDSCSQ----AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
           KI+    D           LGL           S         +I Q+ +VG     ++ 
Sbjct: 6   KILDLFGDLGFFIRRNLTSLGLAARMFTAVIWRSGFLLKRPRLVIDQILFVGNHSFVIIA 65

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+++ AEI
Sbjct: 66  VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAGTSLTAEI 125

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G MK  E++ A+  M +D +  +I+PR+WA IIS+P+L  +     ++G  +V      +
Sbjct: 126 GLMKAGEQLSAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGVLGGYLVGVPLIGV 185

Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+        ++I  GLIK+     A+  +A+ +G+        + +  T  VV
Sbjct: 186 DSGAFWSQMQGGVDLFSDIGNGLIKSLVFGVAVTFIALYQGYEAKPTPEGVSQATTRTVV 245

Query: 352 QSISIVIIIDSLFAIFYFA 370
            S   V+ +D L     F+
Sbjct: 246 ISSLSVLALDFLLTAMMFS 264


>gi|92114341|ref|YP_574269.1| hypothetical protein Csal_2219 [Chromohalobacter salexigens DSM
           3043]
 gi|91797431|gb|ABE59570.1| protein of unknown function DUF140 [Chromohalobacter salexigens DSM
           3043]
          Length = 260

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 132/259 (50%), Gaps = 3/259 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
             IV     +      LG  +    +  A     +      +RQM+++GV  + +V++  
Sbjct: 3   HHIVALGRGTLETVSALGRAVIFLVQA-AWGVPSREGWHLWLRQMHFIGVMSLAIVLVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FGAE     ++++  LRE+  ++ A++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVLGLQGFTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D +R +++PR+WA  +S+PLLT+  +   I G  +V  ++  +   
Sbjct: 122 KATEQLTSMEMIGVDPLRRIVAPRLWAGFVSMPLLTVGFSVVGIWGGYLVGVQWLGVFDG 181

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   S+     +I  G++K+      +  +A+ +G+ +   S  + +  T  VV S 
Sbjct: 182 SYWSNMQSSVAFVDDILNGMLKSVVFGLVVTWIAVFQGYDLVPTSEGISRATTRTVVYSS 241

Query: 355 SIVIIIDSLF-AIFYFAIG 372
             V+ +D +  A+ +  +G
Sbjct: 242 LAVLGLDFVLTALMFGELG 260


>gi|152978463|ref|YP_001344092.1| hypothetical protein Asuc_0787 [Actinobacillus succinogenes 130Z]
 gi|150840186|gb|ABR74157.1| protein of unknown function DUF140 [Actinobacillus succinogenes
           130Z]
          Length = 259

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 127/255 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F          LG            + +F+     LI+Q++ +GV  + ++++  
Sbjct: 4   KLISGFGATVIKSVQALGRSGFMLFGALVGTPQFRKHTPLLIKQLHVLGVQSLLIILMSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F  G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  FFIGMVLGLQGYVVLVDFAAEANVGQLVALALLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA +I++P+L +L     +IG S++   +  I   
Sbjct: 124 KATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAVLFTAVGVIGGSLIGVDWKGIDGG 183

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F+S   +     ++  G IK+   A  +  VA+  G+     S  + +  T  VV S  
Sbjct: 184 SFWSVMQNAVASKDLLYGFIKSVVFAFTVVWVALFNGYDCVPTSEGISQATTKTVVHSSL 243

Query: 356 IVIIIDSLFAIFYFA 370
           +V+ +D +     F 
Sbjct: 244 LVLGLDFVLTAIMFG 258


>gi|315633782|ref|ZP_07889072.1| toluene efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315477824|gb|EFU68566.1| toluene efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 261

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F   + +    LG              + +      I+Q++ +GV  + +++L     G 
Sbjct: 9   FGRHAINFGRALGRAGFLLFGALIGKPQVRKHFPLFIKQLHVLGVQSLLIIMLSGLFIGM 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 69  VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D +R +I+PR WA II++P+L+I+     I G S+V   +  +    F+S 
Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVGVDWKGVDAGSFWSV 188

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             S+ T + +I  G IK+ F A A+  +A+  G+     S  + K  T  VV +  +V+ 
Sbjct: 189 MQSSVTWSHDILNGTIKSVFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLVVLG 248

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 249 LDFVLTAIMFG 259


>gi|260910011|ref|ZP_05916695.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635870|gb|EEX53876.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella sp. oral taxon 472 str. F0295]
          Length = 248

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  + LG  +   G   +   + + F    +++M  +GV  V +V+LISF  GAVI  
Sbjct: 3   ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P++  L+  +P L I ++   I+GA    +  + +           
Sbjct: 123 LDIMGVNSASYLILPKVLGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     ++  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 183 SFNPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242

Query: 364 FAIFYF 369
                 
Sbjct: 243 LTQMLS 248


>gi|187479775|ref|YP_787800.1| membrane protein [Bordetella avium 197N]
 gi|115424362|emb|CAJ50915.1| putative membrane protein [Bordetella avium 197N]
          Length = 262

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            ++       IG  +   I          G +++ +G               + +Q++++
Sbjct: 1   MSALGRFITAIGAWVGDLIRSVGFFTRFFGAILARSGIIFRRP-------RLVSQQVHFI 53

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR
Sbjct: 54  GNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGR 113

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+++ AEIG MK  E++ A+  M +D +R ++ PR W  +I++P+L  + +   I+G  
Sbjct: 114 AGTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRFWGGVIAMPILASVFSMVGILGGW 173

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  +   +  ++  G+IK+      + +VA+ EG+        +
Sbjct: 174 VVGVVMIGVDTGAFWSQMQAGVDIWDDVLNGVIKSVVFGITVTLVALYEGWQARPTPEGV 233

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV     V+ +D L     F 
Sbjct: 234 ARATTRTVVVGSLAVLALDFLLTALMFG 261


>gi|237749420|ref|ZP_04579900.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
 gi|229380782|gb|EEO30873.1| ABC transport system permease [Oxalobacter formigenes OXCC13]
          Length = 258

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      +      +G           +  +       +  Q++++G   + ++ +    
Sbjct: 5   VSNLGYKTRKLIDNIGYATRIFATMFKALPQILKRPRLITDQIFFIGNKSLLIICVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L ++G+E     ++++   RE+G ++TA++ AGR+G+++ AEIG MK 
Sbjct: 65  VGFVLGLQGYYILIRYGSEQALGVMVALSLTRELGPVVTALLYAGRAGTSLTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M ++ V  +++PR WA IIS+PLL  L + + +IG  IV      +    F
Sbjct: 125 GEQLAAMDMMAVNPVDRILAPRFWAGIISMPLLATLFSAAGVIGGYIVGVVLIGVDDGAF 184

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+      +  +I  G+IK+     A+  +A+ +G+        +    T  VV S  +
Sbjct: 185 WSQMQQGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYEARPTPEGVSSATTRTVVYSSLL 244

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 245 VLWLDFIMTALMFN 258


>gi|91225579|ref|ZP_01260653.1| putative ABC superfamily transport protein [Vibrio alginolyticus
           12G01]
 gi|269967998|ref|ZP_06182036.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91189699|gb|EAS75973.1| putative ABC superfamily transport protein [Vibrio alginolyticus
           12G01]
 gi|269827355|gb|EEZ81651.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 263

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
             +      + S     G           S  +       L++Q+Y VGV  + ++++  
Sbjct: 7   HFVASLGRRTLSICGAFGRATFMLIGALFSKPQPIRSFPLLVKQLYSVGVQSLAIIVVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA +IS+PLL ++     I GA +V   +  +   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I   +IK    A  +  VA+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|226532225|ref|NP_001143055.1| hypothetical protein LOC100275524 [Zea mays]
 gi|194697070|gb|ACF82619.1| unknown [Zea mays]
 gi|195613586|gb|ACG28623.1| hypothetical protein [Zea mays]
          Length = 335

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 89  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 148

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 149 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 208

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 209 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 268

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 269 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFIADFALSCLFFQ 324


>gi|212633565|ref|YP_002310090.1| hypothetical protein swp_0685 [Shewanella piezotolerans WP3]
 gi|212555049|gb|ACJ27503.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 235

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 72/234 (30%), Positives = 121/234 (51%), Gaps = 1/234 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                 A   + K  L  L +Q+Y +GV  + ++++     G V+A QG   L  FG E 
Sbjct: 1   MLWGAIAHRPRLKKGLPLLTKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEE 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               ++++  LRE+G ++TA++ AGR+GSA+ AE+  MK  E++ ++  M +D +R +I+
Sbjct: 61  SLGPMVALSLLRELGPVVTALLFAGRAGSALTAELALMKSTEQLSSLEMMAVDPLRQIIA 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIK 316
           PR WA +ISLPLL ++     I G  IV  ++  I    F+S   S+     +I   +IK
Sbjct: 121 PRFWAGVISLPLLALMFTAIGIYGGHIVGVEWKGIDSGAFWSILQSSVEWRQDIVNCMIK 180

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   A  +  +A+  G+ V  +   + +  T  VVQS   V+ +D L     F 
Sbjct: 181 SLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 234


>gi|262273844|ref|ZP_06051657.1| uncharacterized ABC transporter permease component YrbE [Grimontia
           hollisae CIP 101886]
 gi|262222259|gb|EEY73571.1| uncharacterized ABC transporter permease component YrbE [Grimontia
           hollisae CIP 101886]
          Length = 260

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + + +  +G              + K     L+ Q+Y VGV  + ++++    
Sbjct: 6   VQSLGARAMAVSQTMGRATFVLLGALVGKPQPKKMFPLLLTQIYSVGVRSLAIIMVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG   L+ FGAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLSLQGYLVLADFGAESSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +++PR WA +IS+PLL ++     I G  +V   +  I +  +
Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAMIFMMVGIWGGQLVGVDWKGIDYGSY 185

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           ++   S+  L  +I    IK+   A  +  +A+  G+     S  + +  T  VV S   
Sbjct: 186 WAVMQSSVELGYDIGQSFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTALMFG 259


>gi|116331506|ref|YP_801224.1| membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116125195|gb|ABJ76466.1| Membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 259

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 4/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G  I    E   +          ++ QMY  GV  + VV +++  TG +++ 
Sbjct: 9   LTEFFYASGFTILLVYESILNLPHGFFKRKEILDQMYITGVGSISVVSIVAIFTGMIMSL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L  FGAE     LM+I   RE+   +TA+++A   GSA+ AEIG+MKI+EEIDA+
Sbjct: 69  NTGLGLKDFGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D VR LI PRI    I +P+L + +    I+G +IV +    I +  +F      
Sbjct: 129 EVMSIDPVRYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDR 188

Query: 305 A----TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L +++ G++K       +  ++   G      +  +G+     VV S  +VI  
Sbjct: 189 VASIPGLKDLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFT 248

Query: 361 DSLFAIFYF 369
             +     +
Sbjct: 249 GYMITALLY 257


>gi|84502659|ref|ZP_01000778.1| membrane protein [Oceanicola batsensis HTCC2597]
 gi|84389054|gb|EAQ01852.1| membrane protein [Oceanicola batsensis HTCC2597]
          Length = 258

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 107/255 (41%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +    +G V                +    +  +  +G   +PVV L +
Sbjct: 3   RLLGGIGAQVLAVLAAVGRVAIFAAVTLRHLVTPPFYGREFLGALLNIGWLSLPVVGLTA 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG  +A Q     S+F AE     +++I  +RE+G +L  +MIA R  S+I AEI +M
Sbjct: 63  VFTGGALALQIYAGGSRFDAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+ T+    ++ L  PR+ A ++++PLL  + +   I G   V  +      A
Sbjct: 123 KVTEQIDALVTLSTHPMKYLTVPRVLAGLVTVPLLVGVGDIIGIFGGYQVAVRSLGFNPA 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +           ++ + L+K         ++    G   G  +  +G    + V  +  
Sbjct: 183 TYLQNTVDFLEPLDVLSSLVKGAAFGVIATLMGCYSGMNSGRGAQGVGAATKSSVEAASV 242

Query: 356 IVIIIDSLFAIFYFA 370
           +++  + L    +F+
Sbjct: 243 LILAANFLLTGVFFS 257


>gi|170703432|ref|ZP_02894205.1| protein of unknown function DUF140 [Burkholderia ambifaria
           IOP40-10]
 gi|170131663|gb|EDT00218.1| protein of unknown function DUF140 [Burkholderia ambifaria
           IOP40-10]
          Length = 255

 Score =  175 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ +GR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFSGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|116328041|ref|YP_797761.1| membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116120785|gb|ABJ78828.1| Membrane protein of an ABC transporter complex [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 259

 Score =  175 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 4/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G  I    E   +          ++ QMY  GV  + VV +++  TG +++ 
Sbjct: 9   LTEFFYASGFTILLVYESILNLPHGFFKRKEILDQMYITGVGSIFVVSIVAIFTGMIMSL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L  FGAE     LM+I   RE+   +TA+++A   GSA+ AEIG+MKI+EEIDA+
Sbjct: 69  NTGLGLKDFGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D VR LI PRI    I +P+L + +    I+G +IV +    I +  +F      
Sbjct: 129 EVMSIDPVRYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDR 188

Query: 305 A----TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L +++ G++K       +  ++   G      +  +G+     VV S  +VI  
Sbjct: 189 VASIPGLKDLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFT 248

Query: 361 DSLFAIFYF 369
             +     +
Sbjct: 249 GYMITALLY 257


>gi|261344896|ref|ZP_05972540.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rustigianii DSM 4541]
 gi|282567036|gb|EFB72571.1| toluene tolerance ABC efflux transporter, permease [Providencia
           rustigianii DSM 4541]
          Length = 260

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F           G              +F      L++Q+Y VGV  + +V +  
Sbjct: 4   KAIAAFGRRWIETFAAFGRAGYMLFRALFGKPEFAKQWPLLMQQLYSVGVQSLLIVAVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     IIG +IV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+     +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSSMQSSIEWRLDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LSVLGLDFVLTALMFG 259


>gi|313200036|ref|YP_004038694.1| hypothetical protein MPQ_0269 [Methylovorus sp. MP688]
 gi|312439352|gb|ADQ83458.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 259

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +G +I+  +    S A      +  +GE     +         IR++Y+ GV 
Sbjct: 1   MAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFTGVM 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           AI AEIG MK  E++ A+  M +  +  +++PR WA ++S+PLL  L +   ++G  +V 
Sbjct: 114 AITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGYLVA 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  ++     +I  G+IK+     A  ++A+ EGF     +  + + 
Sbjct: 174 VPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGVSRA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIF 367
            T  VV S   V+ +D +   F
Sbjct: 234 TTRTVVNSSLAVLGLDFILTSF 255


>gi|288930100|ref|ZP_06423938.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288328573|gb|EFC67166.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 248

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  + LG  +   G   +   + + F    +++M  +GV  V +V+LISF  GAVI  
Sbjct: 3   ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I ++   I+GA    +  + +           
Sbjct: 123 LDIMGVNSASYLILPKILGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 183 AFKPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242

Query: 364 FAIFYF 369
                 
Sbjct: 243 LTQMLS 248


>gi|254253460|ref|ZP_04946778.1| ABC-type organic solvent resistance transport system permease
           protein [Burkholderia dolosa AUO158]
 gi|124896069|gb|EAY69949.1| ABC-type organic solvent resistance transport system permease
           protein [Burkholderia dolosa AUO158]
          Length = 255

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  S   +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQSGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|212711087|ref|ZP_03319215.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM
           30120]
 gi|212686255|gb|EEB45783.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM
           30120]
          Length = 262

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I  F           G              +F      L++Q+Y VGV  + +V +  
Sbjct: 6   KAIAAFGRRWIETFAAFGRAGYLLFGALFGKPEFGKQWPLLVKQLYSVGVQSLLIVAVSG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 66  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA  IS+PLL+++     IIG +IV   +  I   
Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 185

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+     ++    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 186 FFWSSMQSSVEWRLDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 245

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 246 LSVLGLDFVLTALMFG 261


>gi|165976711|ref|YP_001652304.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|303250627|ref|ZP_07336824.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|303252079|ref|ZP_07338248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307246209|ref|ZP_07528290.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250543|ref|ZP_07532487.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307252926|ref|ZP_07534814.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255189|ref|ZP_07537007.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|165876812|gb|ABY69860.1| probable permease [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|302649061|gb|EFL79248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302650615|gb|EFL80774.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306852818|gb|EFM85042.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857436|gb|EFM89548.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306859564|gb|EFM91589.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862062|gb|EFM94038.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
          Length = 258

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 124/253 (49%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I    +         G              +F+     LI+Q+Y +GV  + +++L    
Sbjct: 5   ISGIGSTVIDFIRAFGRATFMLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 65  IGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L  +     I G S+V   +  +    F
Sbjct: 125 TEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSF 184

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           +S   ++   +++  G IK+   A A+  +A+  G+     S  + +  T  VV +  +V
Sbjct: 185 WSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVV 244

Query: 358 IIIDSLFAIFYFA 370
           + +D +     F 
Sbjct: 245 LGLDFILTAIMFG 257


>gi|237747263|ref|ZP_04577743.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
 gi|229378614|gb|EEO28705.1| ABC transport system permease [Oxalobacter formigenes HOxBLS]
          Length = 258

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N   ++G K  K IND      I   +I    +              +  Q++++G   +
Sbjct: 3   NFISNLGYKTRKSINDIGYATRIFLSLIRALPQVLKRP-------RLITDQIFFIGNKSL 55

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L ++G+E     L+++   RE+G ++TA++ AGR+G+++
Sbjct: 56  IIICVSGLFVGFVLGLQGYYILVRYGSEQALGVLVTLALTRELGPVVTALLYAGRAGTSL 115

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M ++ V+ +++PR WA I+S+P+L  L + + +IG  IV   
Sbjct: 116 TAEIGLMKAGEQLAAMDMMAVNPVKRILAPRFWAGIVSMPILATLFSAAGVIGGYIVGVI 175

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+      +  +I  G+IK+     A+  +A+ +G+        +    T
Sbjct: 176 LIGVDDGAFWSQMQEGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYESRPTPEGVSSATT 235

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S  +V+ +D +     F 
Sbjct: 236 RTVVYSSLLVLWLDFIMTALMFN 258


>gi|242073950|ref|XP_002446911.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor]
 gi|241938094|gb|EES11239.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor]
          Length = 338

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 110/236 (46%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 92  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 151

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+  ++TAV+ AGR GSA  AE+G+M+++E+ D +R +G   V  
Sbjct: 152 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 211

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 212 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 271

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 272 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 327


>gi|221134714|ref|ZP_03561017.1| hypothetical protein GHTCC_07282 [Glaciecola sp. HTCC2999]
          Length = 258

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 132/256 (51%), Gaps = 2/256 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +V+   ++       G           +  + K  +   ++Q+Y VGV  + ++++   
Sbjct: 3   WVVQVGANTLDTIRSFGRAFLMLTGALIAVPQLK-NIRLTLQQIYVVGVQSLLIILVSGL 61

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 62  FIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 121

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR+WA IIS+P+L I+ +   I+G  +V   +  +    
Sbjct: 122 ATEQLSSLEMMAVDPLRRVVAPRVWAGIISMPMLAIIFSAIGILGGHLVGVDWLGVDSGS 181

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++S   +T     ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV S  
Sbjct: 182 YWSIMQATVDWNKDVVNGIIKSIVFAIVVTWIAIFKGYDAVPTSEGISQATTQTVVYSSL 241

Query: 356 IVIIIDSLFAIFYFAI 371
            V+ +D +     F I
Sbjct: 242 AVLGLDFVLTALMFGI 257


>gi|317494033|ref|ZP_07952449.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917806|gb|EFV39149.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 260

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +  F     +     G              +F      L +Q+Y VGV  + ++I+   
Sbjct: 5   ALASFGRRGINVCASFGRAGLMMFNALIGKPEFAKQWPLLRKQLYSVGVQSLLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSAVTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E+I ++  M +D +R +++PR WA IIS+PLLT +     I G S+V   +  I    
Sbjct: 125 ATEQISSMEMMAVDPLRRIVAPRFWAGIISMPLLTAIFVAVGIWGGSVVGVDWKGIDSGF 184

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S    +     ++   +IK+   A  I  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQGSVDFHTDLVNCMIKSVVFAITIMWIALFNGYDAIPTSEGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|322834661|ref|YP_004214688.1| hypothetical protein Rahaq_3972 [Rahnella sp. Y9602]
 gi|321169862|gb|ADW75561.1| protein of unknown function DUF140 [Rahnella sp. Y9602]
          Length = 260

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +        +     G              +F      LI+Q+Y VGV  + ++++  
Sbjct: 4   KALASVGRRGINTCASFGRAGLMLFRALVGKPQFAKQWPLLIKQLYSVGVLSLLIILVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AE+G M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAELGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     + G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGVWGGSLVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQTAVDWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|115350388|ref|YP_772227.1| hypothetical protein Bamb_0333 [Burkholderia ambifaria AMMD]
 gi|172059407|ref|YP_001807059.1| hypothetical protein BamMC406_0342 [Burkholderia ambifaria MC40-6]
 gi|115280376|gb|ABI85893.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD]
 gi|171991924|gb|ACB62843.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6]
          Length = 255

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|325983137|ref|YP_004295539.1| hypothetical protein NAL212_2576 [Nitrosomonas sp. AL212]
 gi|325532656|gb|ADZ27377.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212]
          Length = 265

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I    +        LGL           S         +IR++Y+ GV  + ++++   
Sbjct: 8   GIQSIGHRVIESIWRLGLASRFFILVLLKSGTSLRRFNLVIRELYFTGVLSLIIIVVSGL 67

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L ++G+E     L+++  +RE+G ++ A++ A R+GSAI AEIG MK
Sbjct: 68  FVGMVLGLQGYETLQKYGSESAVGTLVALSLVRELGPVVAALLFASRAGSAITAEIGLMK 127

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ A+  M +D +  +++PR WA +IS+P L  + +   + G  +V   +  +    
Sbjct: 128 ATEQLAAMGMMAVDPIARVVAPRFWAGVISMPFLAAMFSVMGVFGGYLVTVIFIGVDEGS 187

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++S+  S      +I  G IK+ F   A+  +A+ EG+     +  +    T  VV S  
Sbjct: 188 YWSQMQSAVDFRFDILNGFIKSCFFGVAVTAIAVFEGYDAPPTAEGVSGATTRTVVTSSL 247

Query: 356 IVIIIDSLFAIFYF 369
           +++ +D +   F F
Sbjct: 248 VILGLDFILTAFMF 261


>gi|255070247|ref|XP_002507205.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
 gi|226522480|gb|ACO68463.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
          Length = 297

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 109/226 (48%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
              +  K  +   ++Q+  VG   + V +L S   G V   Q   + S+ G       L+
Sbjct: 70  RVLWHRKLNMQQTLQQISRVGPDTLGVSMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLL 129

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
            +   RE+  ++ A+++AGR GSA+ AE+G+M+++E++D +RT+G D V  L++PR+ A 
Sbjct: 130 GLAFTRELTPVICAIVLAGRVGSAVAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVAC 189

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
            +SLP+L++++    +  + ++    Y I                ++     K       
Sbjct: 190 AVSLPILSVISFTIGMAASILLADIRYGISPNAIVDSAAKYLESFDVGVMCAKGFAFGSV 249

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I I++   G      +  +G+  T  VV S+  + ++D   ++F+F
Sbjct: 250 ISIISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMFFF 295


>gi|238756123|ref|ZP_04617444.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473]
 gi|238705662|gb|EEP98058.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473]
          Length = 260

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G              + +     L++Q+Y VGV  + ++++  
Sbjct: 4   QTLASVGRKGINVCATFGRAGLMLFNAIVGRPQLRQQWPLLVKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V   +  I   
Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|254451544|ref|ZP_05064981.1| membrane protein [Octadecabacter antarcticus 238]
 gi|198265950|gb|EDY90220.1| membrane protein [Octadecabacter antarcticus 238]
          Length = 258

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 111/254 (43%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +             +G + + TG+  +   +   +       +  +G   +PVV L +F
Sbjct: 4   SLASLGAGVLGLLAAVGRLATFTGQTISHLVRPPFYGREFANALLQIGYLSLPVVGLTAF 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK
Sbjct: 64  FTGGALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+    ++ L  PR+ A  + +P+L  + +   I G  +V  +      A 
Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +          ++I + L K         ++    G      +  +G+   + VV +  +
Sbjct: 184 YLQNTADFLEPSDIVSSLAKGAVFGFIAALMGCYYGMNSERGAMGVGRATKSSVVAAAIL 243

Query: 357 VIIIDSLFAIFYFA 370
           ++  + L    +F+
Sbjct: 244 ILAANFLLTEAFFS 257


>gi|56697513|ref|YP_167881.1| membrane protein [Ruegeria pomeroyi DSS-3]
 gi|56679250|gb|AAV95916.1| membrane protein [Ruegeria pomeroyi DSS-3]
          Length = 260

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 110/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S     G V     +  +   +   +   L   +  +G   +PVV L +  TG  +A Q 
Sbjct: 16  SVLASFGRVTLFALDAVSHILRPPYYPRELAIALLNIGWLSLPVVGLTAIFTGGALALQI 75

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T
Sbjct: 76  YAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVT 135

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +    ++ L +PR+ A +I++PLL  + +   I+G   V  +      A +         
Sbjct: 136 LSTHPMKYLTAPRVLAALITVPLLVGIGDIIGIMGGYTVAVQNLGFNAAAYLQNTVDFLE 195

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++ + L+K         ++    G   G  +  +G+     V  +  +++  + +   
Sbjct: 196 TRDVVSSLVKGAVFGVIAALMGCYYGMNSGRGAQGVGRATKGSVEAAAVLILAANFVLTG 255

Query: 367 FYFAI 371
            +F+I
Sbjct: 256 VFFSI 260


>gi|149277771|ref|ZP_01883911.1| ABC transporter, permease [Pedobacter sp. BAL39]
 gi|149231459|gb|EDM36838.1| ABC transporter, permease [Pedobacter sp. BAL39]
          Length = 269

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 116/245 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  L  V      F    +        L+RQ Y +G   + ++ L  F+TG V  +
Sbjct: 21  ISRMFLTLYDVCQFVTRFFKEGFLPPYEGKELMRQCYDIGYRSLALISLTGFITGVVFTK 80

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L++FGA  +   L+ I  LR +  LLTA++ AG+ GS+I AE+GSM++ E+IDA+
Sbjct: 81  QSRPSLAEFGATSWLPSLVGIALLRTLAPLLTALIAAGKVGSSIGAELGSMRVTEQIDAM 140

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
                +  + L+S R+ A  I++P+LT       ++GA + +  + D     FF     +
Sbjct: 141 EVSATNPFKFLVSTRVMASTITIPILTFYTAMVGMLGALLNVSLFEDTSARAFFQMSLES 200

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  +I    +KA      IG+V   +G+     +  +GK   + VV  + ++ I + + 
Sbjct: 201 ITFLDITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIGMFLIFIEEVIS 260

Query: 365 AIFYF 369
             F+ 
Sbjct: 261 VQFFS 265


>gi|315022937|gb|EFT35960.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Riemerella anatipestifer
           RA-YM]
 gi|325336426|gb|ADZ12700.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Riemerella anatipestifer
           RA-GD]
          Length = 253

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 3/253 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +  S      +G  +   G+      K   F   L+R++  +GV+   +V+  S   GA
Sbjct: 1   MLKLSKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGA 60

Query: 181 VIAQQGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           V+A Q               F      ++ + E    + ++++AG+ GS I + IG+M++
Sbjct: 61  VVAIQMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRV 120

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+  MG++    LI P+I A +I  PLL  ++    I G  +      +   A +
Sbjct: 121 TEQIDALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADY 180

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +          I+    K    A  I  +    G+ V   S  +G+  T  VV ++  +
Sbjct: 181 ITGIQRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAI 240

Query: 358 IIIDSLFAIFYFA 370
           II + +    + +
Sbjct: 241 IIAELISTQLFLS 253


>gi|307564910|ref|ZP_07627431.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
 gi|307346383|gb|EFN91699.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
          Length = 248

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +       +   + + F  S +R+M  +GV+ + +V+LISF  GAVI  Q   
Sbjct: 7   LFSFGEYLMLMKRTFSRPERMRMFFKSYVREMSQLGVNSIGIVLLISFFIGAVICIQIRL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    +   + L E    +  ++++G+ GS I +E+GSM++ ++IDA+  M
Sbjct: 67  NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGSMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I +    ++GA    +  + I  A            
Sbjct: 127 GINSASYLILPKILGLMTLMPFLVIFSAAIGMVGAYSTAYIGHVISPADLTEGVQHHFNQ 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  ++K  F A  I  V+   G++V   S  +GK  T  VV+S  +++  D      
Sbjct: 187 WFMWMSILKGFFFAFIISSVSSYMGYSVKGGSQEVGKASTDAVVKSSVLILFSDVFLTQL 246

Query: 368 YF 369
             
Sbjct: 247 LS 248


>gi|171322154|ref|ZP_02911012.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
 gi|171092530|gb|EDT37852.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5]
          Length = 255

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPVKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|289207570|ref|YP_003459636.1| hypothetical protein TK90_0385 [Thioalkalivibrio sp. K90mix]
 gi|288943201|gb|ADC70900.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix]
          Length = 260

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 1/257 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I      S +   + G       +  AS           + Q+Y VGV  + ++I+   
Sbjct: 4   AIASLGRSSLNALVVFGRAFLFLLQVLASLDIVIRRFGLTVVQIYSVGVRSLLIIIVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L  FGA      ++++  +RE+G ++TA++ AGR+GSA+ AE+G MK
Sbjct: 64  FVGMVLGYQGYITLVNFGAAEALGGVVALSLVRELGPVVTALLFAGRAGSALTAELGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ A+  M ++  R + +PR  A  +S+PLL  + +   ++G  IV      +    
Sbjct: 124 TTEQLSAMEMMAVNPYRRIFAPRFVAGFLSMPLLAAIFSAVGVMGGYIVGVGMLGVDSGA 183

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +FS+  S      ++ +G+IK+      +  +A+ +GF     S  + +  T  VV S  
Sbjct: 184 YFSQMQSVTDWNEDVLSGVIKSIVFGFVVTWIAVFQGFNAMPTSEGISRATTQTVVVSSL 243

Query: 356 IVIIIDSLFAIFYFAIG 372
            V+ +D +     F  G
Sbjct: 244 AVLGLDFILTGLMFGTG 260


>gi|325519291|gb|EGC98730.1| hypothetical protein B1M_40153 [Burkholderia sp. TJI49]
          Length = 255

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|320538922|ref|ZP_08038598.1| putative phospholipid transporter subunit: membrane component of
           ABC superfamily [Serratia symbiotica str. Tucson]
 gi|320031082|gb|EFW13085.1| putative phospholipid transporter subunit: membrane component of
           ABC superfamily [Serratia symbiotica str. Tucson]
          Length = 260

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +          +   G              + +     L++QMY +GV  + ++++  
Sbjct: 4   QALASLGRRCIDTSASFGRAGLMLFNALVGQPEPRKQWPLLLKQMYSIGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA +ISLPLLTI+     ++G +IV   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISLPLLTIIFVALGMLGGAIVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   L+K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSTGISQATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|312795842|ref|YP_004028764.1| Toluene transport system permease [Burkholderia rhizoxinica HKI
           454]
 gi|312167617|emb|CBW74620.1| Toluene transport system permease [Burkholderia rhizoxinica HKI
           454]
          Length = 255

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G+ ++  ++ +   A +   + S                 ++I+Q++++G   + 
Sbjct: 1   MIATVGRAVLDGLSRTGYGARMFARLASECFPLLRRP-------RTVIQQIHFLGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D +R++++PR WA +I++P+L  + +   I+G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPIRVVVAPRFWAGVIAMPILAAIFSAVGIVGGYVVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  S   L  +I  G+IK+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQSGVDLRQDIGNGVIKSIVFGFAVTFVALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F 
Sbjct: 234 TVVFASLAVLGLDFLLTALMFN 255


>gi|307129071|ref|YP_003881087.1| putative toluene transporter subunit: membrane protein [Dickeya
           dadantii 3937]
 gi|306526600|gb|ADM96530.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 260

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              +       L +Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPAKQWPLLRKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KTTEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWRKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|271498870|ref|YP_003331895.1| hypothetical protein Dd586_0293 [Dickeya dadantii Ech586]
 gi|270342425|gb|ACZ75190.1| protein of unknown function DUF140 [Dickeya dadantii Ech586]
          Length = 260

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              +       L +Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRVGIQVCASFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   +IK+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVEWQKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|219870961|ref|YP_002475336.1| resistance to organic solvents ABC transporter permease
           [Haemophilus parasuis SH0165]
 gi|219691165|gb|ACL32388.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Haemophilus parasuis
           SH0165]
          Length = 257

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 126/255 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I             +G              +F+      I+Q++ +GV  + +++L  
Sbjct: 2   EFISSIGASVIQAIRAMGRATFMLWGALVDKPEFRKHTPLFIKQLHVLGVQSLLIIMLSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA II++P+L ++     I G S+V   +  +   
Sbjct: 122 KATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVDWKGVDVG 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F+S   ST T+ ++  G IK+   A A+  +A+  G+     S  + +  T  VV +  
Sbjct: 182 SFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTRTVVHASL 241

Query: 356 IVIIIDSLFAIFYFA 370
           +++ +D +     F 
Sbjct: 242 VILGLDFILTAIMFG 256


>gi|313206130|ref|YP_004045307.1| hypothetical protein Riean_0637 [Riemerella anatipestifer DSM
           15868]
 gi|312445446|gb|ADQ81801.1| protein of unknown function DUF140 [Riemerella anatipestifer DSM
           15868]
          Length = 253

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 3/253 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +  S      +G  +   G+      K   F   L+R++  +GV+   +V+  S   GA
Sbjct: 1   MLKLSKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGA 60

Query: 181 VIAQQGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           V+A Q               F      ++ + E    + ++++AG+ GS I + IG+M++
Sbjct: 61  VVAIQMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRV 120

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+IDA+  MG++    LI P+I A +I  PLL  ++    I G  +      +   A +
Sbjct: 121 TEQIDALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADY 180

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +          I+    K    A  I  +    G+ V   S  +G+  T  VV ++  +
Sbjct: 181 ITGIQRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAI 240

Query: 358 IIIDSLFAIFYFA 370
           II + +    + +
Sbjct: 241 IIAELVSTQLFLS 253


>gi|114321371|ref|YP_743054.1| hypothetical protein Mlg_2222 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227765|gb|ABI57564.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 259

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
                   + +    +G          A   +       +I+Q+Y VGV  + ++++   
Sbjct: 5   AFRNLGARTLAALGGVGRAHLLMFRLLAGLLRVLAQPRYIIQQLYAVGVLSLVIIVVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG + L  FGA      L+++  LRE+G ++TA++ AGR+GS++ AE+G MK
Sbjct: 65  FVGMVLALQGYYTLVDFGAAESVGVLVALSLLRELGPVVTALLFAGRAGSSLTAEVGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D    +I+PR  A ++++PLL  + +   I G  +V      +    
Sbjct: 125 ATEQLSSMEMMAVDPELRVIAPRFLACVVAVPLLAGIFSLVGIYGGYLVSVGLIGLDGGA 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++    S  + + ++  G+IK+      +G +A+ +G+     S  + +  T  VV +  
Sbjct: 185 YWGNMQSAVSFSDDVLNGVIKSVVFGIVVGWIALYKGYEAVPTSEGVSRATTHGVVHASL 244

Query: 356 IVIIIDSLFAIFYF 369
            V+ +D L     F
Sbjct: 245 AVLGLDFLLTALMF 258


>gi|134294506|ref|YP_001118241.1| hypothetical protein Bcep1808_0394 [Burkholderia vietnamiensis G4]
 gi|134137663|gb|ABO53406.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4]
          Length = 255

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|91774594|ref|YP_544350.1| hypothetical protein Mfla_0238 [Methylobacillus flagellatus KT]
 gi|91708581|gb|ABE48509.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT]
          Length = 263

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 136/265 (51%), Gaps = 8/265 (3%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
           +++  N+   IG +++  +    +       V+  +GE           L   IR++Y+ 
Sbjct: 2   FSAVANMLRGIGHRVIDRLWRFGAGIRFFFYVLIYSGESFRR-------LHLTIREIYFT 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++ +F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR
Sbjct: 55  GVLSLIIILVSAFFVGMVLALQGYNTLQRYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+AI AEIG M+  E++ A+  M +  +  +++PR WA + S+PLL  L +   ++G  
Sbjct: 115 AGTAITAEIGLMRATEQLSAMEMMAVSPIARVVAPRFWAGLFSMPLLAALFSMVGVLGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           +V      +    F+S+  ++     +I  G+IK+     A  ++A+ EGF     +  +
Sbjct: 175 LVAVPLIGVDAGAFWSQMQASVDFREDIVNGVIKSLVFGIACTMIALFEGFDAPPTAEGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367
            +  T  VV S   V+ +D +   F
Sbjct: 235 SRATTRTVVNSSLAVLGLDFIMTSF 259


>gi|224827292|ref|ZP_03700385.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002]
 gi|224600505|gb|EEG06695.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002]
          Length = 261

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
           + +      H+G   +  I      +  L  ++  +G+           L   IR++Y+ 
Sbjct: 2   FETLTAPLRHLGHVTINAIWRLGFASRFLLAILLQSGQSFRR-------LNLTIREVYFA 54

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V+  QG   LS+FG+      L+++  LRE+G +L A++ A R
Sbjct: 55  GVLSLIIIVVSGLFVGMVLGLQGYNTLSRFGSADALGALVALSLLRELGPVLAALLFASR 114

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSA+ AEIG MK  E++DA+  M ++ +  +++PR WA +IS+P+L  L N + I G  
Sbjct: 115 SGSAMTAEIGLMKATEQLDAMSVMAVNPIARVVAPRFWAGVISMPVLAALFNVTGIFGGY 174

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            V  +   +    F+S+  ++  L  ++  GLIK+ F   A+ ++A+ EG+     +  +
Sbjct: 175 FVGVQLIGLDEGTFWSQMQNSVDLHNDVINGLIKSLFFGIAVTLIAVFEGYDATPTAAGV 234

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
               T  VV S  +++ +D +   F F
Sbjct: 235 SSATTRTVVTSALVILALDFVLTAFMF 261


>gi|148977765|ref|ZP_01814321.1| putative ABC superfamily transport protein [Vibrionales bacterium
           SWAT-3]
 gi|145962979|gb|EDK28249.1| putative ABC superfamily transport protein [Vibrionales bacterium
           SWAT-3]
          Length = 259

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I      + +     G              + K     L++Q+Y VGV  + ++++  
Sbjct: 4   KTIAGVGKRTLAICESFGRASLMLFGALFGIPRLK-NFPLLVKQLYSVGVQSLAIILVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I G  +V   +  I   
Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 183 SFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 LAVLGLDFVLTALMFG 258


>gi|198282478|ref|YP_002218799.1| hypothetical protein Lferr_0338 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218667295|ref|YP_002424668.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198246999|gb|ACH82592.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218519508|gb|ACK80094.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 260

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/251 (27%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +      LG           +       +  L++Q+Y  GV  + ++++ +F TG
Sbjct: 9   NLGRRTLRTVPNLGTASRFLLLSLFAVANRHFSIQQLLKQVYGFGVRSLLLMMVAAFFTG 68

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L +FGA      L+++  LRE+G +LTA++ AGR+GSA+ AEI SMK  E
Sbjct: 69  MVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAGSALTAEISSMKATE 128

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M ++ +  +++PR+WA I+ +P+L ++ +   I G  ++      +    F++
Sbjct: 129 QLSAMEMMAVNPLAWVVAPRLWAGILVVPILCVIFDLVGIFGGYLISVPVLGVDGGTFWA 188

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +  S    + +I TGL KA      +  +A  +G+A    +  +G   T  VV +   V+
Sbjct: 189 QMQSNVAFSGDILTGLFKALCFGLVVTWIAAWQGYAAQPTAEGVGNATTISVVTASLAVL 248

Query: 359 IIDSLFAIFYF 369
            +D +   F F
Sbjct: 249 GLDFILTAFLF 259


>gi|152980680|ref|YP_001354988.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
 gi|151280757|gb|ABR89167.1| ABC transport system permease protein [Janthinobacterium sp.
           Marseille]
          Length = 258

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 131/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              L   IG+ + +F+ +          +I  +G               +  Q++++G  
Sbjct: 1   MIWLLETIGRLVREFVVNIGFATRTFFGIIGASGGLLRR-------FRLVTSQIHFIGNY 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+
Sbjct: 54  SLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ ++ +++PR WA +I++P+L  + +   I+G  IV 
Sbjct: 114 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVIAMPILAAIFSAVGILGGYIVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   +    F+S+      +  +I  G+IK+     A+  +A+ +G+        + + 
Sbjct: 174 VQLIGVDEGAFWSQMQGGVDVWNDIVNGVIKSIVFGFAVTFIALYQGYEAQPTPEGVARA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 234 TTRTVVIASLSVLWLDFLLTALMFS 258


>gi|261855373|ref|YP_003262656.1| hypothetical protein Hneap_0760 [Halothiobacillus neapolitanus c2]
 gi|261835842|gb|ACX95609.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus
           c2]
          Length = 266

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 132/272 (48%), Gaps = 8/272 (2%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
            + + N+F N    +G+  +  +  +       G ++        +  + +     ++++
Sbjct: 1   MNGYRNAFFNGLALLGQGALAAVAHAGQMILFTGQLL---WRLLPAWTRPR----LIVQE 53

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +Y +GV  + ++++     G V+  QG   LS+F A      ++++  +RE+G ++TA++
Sbjct: 54  LYAIGVLSLVIILISGGFVGLVLGLQGYNILSKFNATESLGVMVALSLVRELGPVVTALL 113

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
            AGR+GSA+ AEI  MK  E++ A+  M +D +R +++PR W  + S+PLL  L +   I
Sbjct: 114 FAGRAGSAVTAEIALMKTTEQLSAMEMMAVDPLRRVVAPRFWGAVFSMPLLAGLFSLVGI 173

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            G   +      +  A ++ +         ++  G+IK+      +G++A+ EGF     
Sbjct: 174 AGGYFIGVVVLGVDPASYWGQIQQQMQPVDDVLNGVIKSLVFGAVVGLIAVFEGFNAEPT 233

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           S  + +  T  VV S   V+ +D +   + F 
Sbjct: 234 SLGISRATTRTVVLSSLCVLGLDFILTAWMFG 265


>gi|317046704|ref|YP_004114352.1| hypothetical protein Pat9b_0470 [Pantoea sp. At-9b]
 gi|316948321|gb|ADU67796.1| protein of unknown function DUF140 [Pantoea sp. At-9b]
          Length = 260

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        +     G               F+     L++Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRQGINTCAAFGRAGMMLFHALVGKPAFRKHAPLLVKQLYSVGVMSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R ++SPR WA  IS+PLL ++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVSWKGIDPG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      +I   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQNAVDFRTDIINCIIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|170695754|ref|ZP_02886896.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
 gi|170139359|gb|EDT07545.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M]
          Length = 259

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 1/259 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            IG  I              G             +        + +Q+++VG   + ++ 
Sbjct: 1   MIGTLISSVGRVVLDGLGTAGYATRFFLRLLVEFFPLLRRPRLVTKQIHFVGNYSLVIIA 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEI
Sbjct: 61  VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +   I G  +V      +
Sbjct: 121 GLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGIAGGYVVGVLLIGV 180

Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+      +  ++  G++K+     A+  VA+ +G+        + +  T  VV
Sbjct: 181 DAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRATTKTVV 240

Query: 352 QSISIVIIIDSLFAIFYFA 370
            +   V+ +D L     F+
Sbjct: 241 YASLAVLGLDFLLTALMFS 259


>gi|183597953|ref|ZP_02959446.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827]
 gi|188022725|gb|EDU60765.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827]
          Length = 260

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I              G              +F      LI+Q+Y VGV  + +V +  
Sbjct: 4   EAIAALGRRWIEIFSAFGRAGYMLFRSLIGKPEFSKQWPLLIKQLYAVGVQSLLIVAVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I+G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F++   S+     +I    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWASMQSSVDWRMDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|238025995|ref|YP_002910226.1| ABC transporter inner membrane subunit [Burkholderia glumae BGR1]
 gi|237875189|gb|ACR27522.1| ABC transporter, inner membrane subunit [Burkholderia glumae BGR1]
          Length = 255

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I              G             +        + +Q++++G     ++ +    
Sbjct: 2   ISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L+++GAE     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK 
Sbjct: 62  VGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLYAGRAGTSLTAEIGLMKA 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M +D ++ +I+PR+WA II++PLL+ +     +IG  +V      +    F
Sbjct: 122 GEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCAVGVIGGYVVGVILIGVDPGAF 181

Query: 298 FSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+        +++  G++K+     A+  VA+ +G+        + +  T  VV +   
Sbjct: 182 WSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTRTVVYASLA 241

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F+
Sbjct: 242 VLGLDFLLTALMFS 255


>gi|329297311|ref|ZP_08254647.1| hypothetical protein Pstas_13477 [Plautia stali symbiont]
          Length = 260

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 1/259 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
              + +        +     G               F+     L++Q+Y VGV  + +++
Sbjct: 1   MWLQALASLGRQGINTYAAFGRASLMLFHALVGKPAFRKHAPLLVKQLYSVGVLSLLIIV 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG   L+ + AE     L+++  LRE+G ++TA++ AGR+GSA+ AEI
Sbjct: 61  VSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G MK  E++ ++  M +D +R ++SPR WA  IS+PLL ++     I G ++V   +  I
Sbjct: 121 GLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVAWKGI 180

Query: 293 PFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV
Sbjct: 181 DPGFFWSTMQNAVDFRTDVINCLIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVV 240

Query: 352 QSISIVIIIDSLFAIFYFA 370
            +   V+ +D +     F 
Sbjct: 241 HASLAVLGLDFVLTALMFG 259


>gi|261868147|ref|YP_003256069.1| ABC transporter permease [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413479|gb|ACX82850.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 261

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I     ++ + A  +G              +       LI+Q++ +GV  + +++L    
Sbjct: 6   ISALGRNAINFARAMGRAGFLLFGALIGKPQINKHFPLLIKQLHVLGVQSLLIIMLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +I++P+L+I+     I G S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILSIIFIAIGIWGGSLVGVDWKGVDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S+ T + +I  G IK+ F A A+  +A+  G+     S  + K  T  VV +  +
Sbjct: 186 WSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFA 370
           ++ +D +     F 
Sbjct: 246 ILGLDFVLTAIMFG 259


>gi|186684564|ref|YP_001867760.1| hypothetical protein Npun_F4449 [Nostoc punctiforme PCC 73102]
 gi|186467016|gb|ACC82817.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102]
          Length = 218

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/213 (28%), Positives = 105/213 (49%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           ++ +   G   +  V+L+S   G +   Q A +L +FGAE       ++   RE+  +LT
Sbjct: 1   MQHLVTAGPGSISPVLLVSGFAGMIFTIQTARELVRFGAENAVGGAFALAFCRELAPILT 60

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           A ++AG+ GSA  AEIG+M++ E+IDA+  +  D +  L+ PR+ A  + +PL+TILA  
Sbjct: 61  ASIMAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMVPLMTILALV 120

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           + IIG       +Y I    F     +    +++F  L+K       + ++    G    
Sbjct: 121 TGIIGGVFAGSYFYKIIPETFLESVRNFLEPSDLFIILLKGFIFGVLVAVIGCSWGLTTK 180

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +  +G+  T  VV S   + I+D   ++  F
Sbjct: 181 GGAKEVGESATKAVVTSWVSIFIMDFFLSLLLF 213


>gi|226229261|ref|YP_002763367.1| putative transporter [Gemmatimonas aurantiaca T-27]
 gi|226092452|dbj|BAH40897.1| putative transporter [Gemmatimonas aurantiaca T-27]
          Length = 275

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 112/264 (42%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
                 L   +  +I      +      +G       +   ++     +L         +
Sbjct: 4   PREPAGLPERLHDRITALGGVTRRLIEPIGTGARFVRDVARATKDTAQWLPEFSTHARVL 63

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  +P+ I I+  TG V+A   ++ +       F   L+      E+  +LT + +AGR
Sbjct: 64  GVDSLPIGIFIALFTGIVLALLASYSVGDLVPPYFVGTLVQKTITLELAPVLTGLALAGR 123

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            G+ I AE+G+M++ E+IDA+ T+  D +  L+ PR+ A  +  P++  +A    ++   
Sbjct: 124 VGANIAAELGTMRVTEQIDALETLTFDPMSHLVVPRVLASALMFPIVVGMAMLVGLLSGW 183

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +      DI    F           ++  GL+K+     A+ ++  + G      +  +G
Sbjct: 184 VASIVLLDIATPQFLKGVRLFFQPFDVQYGLVKSASFGAAVALIGCRAGLNTLGGAQGVG 243

Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367
           +  T  VV S  +++++D+ +AI 
Sbjct: 244 RSATRAVVISAVMILVLDAFWAIV 267


>gi|146313264|ref|YP_001178338.1| hypothetical protein Ent638_3630 [Enterobacter sp. 638]
 gi|145320140|gb|ABP62287.1| protein of unknown function DUF140 [Enterobacter sp. 638]
          Length = 260

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V  ++  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVQWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAVDLRMDLVNCLIKSVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|254229285|ref|ZP_04922703.1| conserved hypothetical protein [Vibrio sp. Ex25]
 gi|262393183|ref|YP_003285037.1| ABC transporter permease component YrbE [Vibrio sp. Ex25]
 gi|151938209|gb|EDN57049.1| conserved hypothetical protein [Vibrio sp. Ex25]
 gi|262336777|gb|ACY50572.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp.
           Ex25]
          Length = 263

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
             +      + S     G           +  +       L++Q+Y VGV  + ++++  
Sbjct: 7   HFVASLGRRTLSICGAFGRATFMLIGALFTKPQPLKSFPLLVKQLYSVGVQSLAIIVVSG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 67  LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D ++ +I+PR WA  IS+PLL ++     I GA +V   +  +   
Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I   +IK    A  +  VA+  G+     S  + +  T  VV S 
Sbjct: 187 SFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSS 246

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 247 LAVLGLDFVLTALMFG 262


>gi|298491186|ref|YP_003721363.1| hypothetical protein Aazo_2257 ['Nostoc azollae' 0708]
 gi|298233104|gb|ADI64240.1| protein of unknown function DUF140 ['Nostoc azollae' 0708]
          Length = 265

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 1/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             I   G+      K K    + + Q+  VG   + + +L +   GAV   Q A +   F
Sbjct: 19  AAILLGGQVIVHLMKGKIHRRNTLEQLAAVGPDSLFIALLTAVFVGAVFTIQVAREFINF 78

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA      ++++   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D + 
Sbjct: 79  GAGNLVGGVLAVALTRELTPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLILKTDPID 138

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PRI A ++ LP+LT+L+  + + G  I+    Y++   VF     +   + +I + 
Sbjct: 139 YLVIPRIIACLLMLPILTLLSLLAGMFGGLIIATHIYNLSDTVFLDSARNFLDIWDICSA 198

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
           +IKA      I I+    G      +  +G+  TT VV ++ I+ I +   + + +   G
Sbjct: 199 MIKAGCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFISNFFLSWLMFQETG 258


>gi|33151499|ref|NP_872852.1| permease [Haemophilus ducreyi 35000HP]
 gi|33147719|gb|AAP95241.1| probable permease [Haemophilus ducreyi 35000HP]
          Length = 259

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 120/251 (47%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                        G              +F      LI+Q+Y +GV  + ++IL     G
Sbjct: 8   HLGEHCIQLVKTFGRATLMLWGALIGKPQFSKHTPLLIKQLYILGVQSLLIIILSGLFIG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEI  MK  E
Sbjct: 68  MVLALQGYVVLVDFAAESSLGTLISLSLLRELGPVVTALLFAGRAGSALTAEIALMKATE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  M +D +R +I+PR WA +IS+P+L ++     I G S+V   +  +    F+S
Sbjct: 128 QLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWS 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +    ++  G IK+   A A+  +A+  G+     S  + +  T  VV +  IV+ 
Sbjct: 188 VMQHSVNGQDLINGFIKSIIFAIAVVWIALFNGYDSTATSEGISQATTRTVVHASLIVLG 247

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 248 LDFILTAMMFG 258


>gi|167854684|ref|ZP_02477464.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755]
 gi|167854221|gb|EDS25455.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755]
          Length = 258

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 126/255 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I             +G              +F+      I+Q++ +GV  + +++L  
Sbjct: 3   EFISSIGASVIQAIRAMGRATFMLWGALVGKPEFRKHTPLFIKQLHVLGVQSLLIIMLSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA II++P+L ++     I G S+V   +  +   
Sbjct: 123 KATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVDWKGVDVG 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F+S   ST T+ ++  G IK+   A A+  +A+  G+     S  + +  T  VV +  
Sbjct: 183 SFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTRTVVHASL 242

Query: 356 IVIIIDSLFAIFYFA 370
           +++ +D +     F 
Sbjct: 243 VILGLDFILTAIMFG 257


>gi|24214757|ref|NP_712238.1| ABC transporter membrane protein [Leptospira interrogans serovar
           Lai str. 56601]
 gi|45657720|ref|YP_001806.1| ABC transporter permease protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24195758|gb|AAN49256.1| membrane protein of an ABC transporter complex [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45600960|gb|AAS70443.1| ABC transporter permease protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 259

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 4/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                +  G  I    E   +          ++ QMY  GV  + VV +++  TG +++ 
Sbjct: 9   LTEFFYASGFTILLVYESILNLPYSFFKRKEILDQMYITGVGSISVVSIVAVFTGMIMSL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L  FGAE     LM+I   RE+   +TA+++A   GSA+ AEIG+MK++EE+DA+
Sbjct: 69  NTGLGLKDFGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKVSEEVDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D VR LI PRI    + +P+L + +    I+G +IV +    I +  +F      
Sbjct: 129 EVMSIDPVRYLIFPRILGFSVMVPVLCVYSTALGILGGAIVGYFQLGIDYFTYFRDVFDR 188

Query: 305 A----TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L +++ G++K       +  ++   G      +  +G+     VV S  +VI  
Sbjct: 189 IASIPGLKDLYVGILKGFIFGIIVSAISCSHGLRTSGGAIGVGRATRESVVASFLMVIFT 248

Query: 361 DSLFAIFYF 369
             +    ++
Sbjct: 249 GYMITALFY 257


>gi|282860201|ref|ZP_06269275.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
 gi|282587022|gb|EFB92253.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
          Length = 248

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G  +   G   +   + + FL S IR+M  +GV  + +V+LISF  GAVI  
Sbjct: 3   IVNWLTSFGKYLMLMGRTFSRPERIRMFLKSYIREMSQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  ++++G+ GS I +E+G+M++ ++IDA
Sbjct: 63  QIRLNVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I +  + ++GA    +  + I  +        
Sbjct: 123 LEIMGINSASYLILPKILGLVTIMPFLVIFSAATGMLGAYATAYIGHIISPSDLTDGVQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++  +IK+ F A  I  VA   G+ V   S  +GK  T  VV S  +V+  D  
Sbjct: 183 QFNQWFMWMSIIKSLFFAFIIASVAAYMGYTVKGGSQEVGKASTDAVVTSSVLVLFSDVF 242

Query: 364 FAIFYF 369
                 
Sbjct: 243 LTQILS 248


>gi|193214677|ref|YP_001995876.1| hypothetical protein Ctha_0964 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088154|gb|ACF13429.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 248

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 116/245 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    LG           +  +       ++ QM ++GV  +P+V+L+S  TGA+ A 
Sbjct: 4   FTNFFSELGEATLLFWAVLKALPRIFRDRTLVLAQMSHIGVDSLPLVLLVSIFTGAIAAW 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A+Q+           + S + + E+G +LT ++IAGR G++I AE+G+MK+ E+IDA+
Sbjct: 64  QAAYQMKGLAPLSLVGGITSRVIIIELGPVLTGIIIAGRVGASIAAELGTMKVTEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +   R L  PRI A  I +P+L I AN  AI+GA IV   +  I   VFF    + 
Sbjct: 124 EIMAISPSRYLAMPRILATTIMMPVLVIFANIIAIVGAFIVSNMFLGISKQVFFDSLKTF 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++   L+K+        +     GF     +  +G       V S ++++I D   
Sbjct: 184 FYTGDVVGALVKSGIFGLMTSLAGCHIGFRTDGGAEGVGISTIRSFVVSSAMILIADYFL 243

Query: 365 AIFYF 369
             F F
Sbjct: 244 WFFLF 248


>gi|317050884|ref|YP_004112000.1| hypothetical protein Selin_0700 [Desulfurispirillum indicum S5]
 gi|316945968|gb|ADU65444.1| protein of unknown function DUF140 [Desulfurispirillum indicum S5]
          Length = 256

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 76/254 (29%), Positives = 126/254 (49%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +            + G++           ++    L  + +Q   +GV+ + VV+L  
Sbjct: 3   RILNSLGQGMYHAMQVSGMIFFTFLHSALWLFRPPLRLRVIFKQFESIGVNSIFVVLLTG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+A Q     SQF AE     + ++   RE+G +LTA+M+  R+GSA+ AE+G+M
Sbjct: 63  TFTGMVLALQLYIGFSQFHAEYLVGAVSALAIFRELGPVLTALMVTARAGSAMAAELGTM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+RTM +D  + L +PRI A  + LP+LT++AN  AI G   V  K   I   
Sbjct: 123 KVTEQIDALRTMAVDPHQYLATPRILASFVMLPVLTMVANAVAIGGCYFVGVKLLGINPV 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           VF  +      + +I  GLIK+      +G V    G      +  +G+  TT VV + +
Sbjct: 183 VFVDQIIIFVDMGDIINGLIKSAAFGLVMGSVCCGIGMNASKGAAGVGQATTTSVVLTST 242

Query: 356 IVIIIDSLFAIFYF 369
           +++ +D +     F
Sbjct: 243 LILAVDYILTALMF 256


>gi|282878075|ref|ZP_06286880.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281299815|gb|EFA92179.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 250

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 2/249 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I    +     G  +   G       + + F    +++M  +GV  +P+V+LISF  GAV
Sbjct: 3   IKLLITYLTTFGEYLILMGRTFRRPERMRMFFKRYVKEMCQLGVDSIPLVLLISFFIGAV 62

Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       ++   +   + L E       +++AG+ GS I +E+G+M++ ++
Sbjct: 63  ICIQMKVNVQSPWMPRWTTGYVTREIFLLEFASAFMCLILAGKVGSNIASELGTMRVTQQ 122

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I  LI  +P L I ++ + IIGA         +      + 
Sbjct: 123 IDALDIMGVNPASYLILPKIAGLITIMPFLVIFSSVAGIIGAYGTA-YSGVLSPDDLTAG 181

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
           F  +  +  ++  +IK+   A  I  V+   G++V   S  +G+  T  VV S  +V+  
Sbjct: 182 FQYSFNVWFVWMSIIKSIVFAFIIASVSSFYGYSVRGGSVEVGEASTNAVVSSSVLVLFA 241

Query: 361 DSLFAIFYF 369
           D        
Sbjct: 242 DVFLTPLLS 250


>gi|161523498|ref|YP_001578510.1| hypothetical protein Bmul_0318 [Burkholderia multivorans ATCC
           17616]
 gi|189351729|ref|YP_001947357.1| putative ABC transporter permease [Burkholderia multivorans ATCC
           17616]
 gi|221201636|ref|ZP_03574674.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
 gi|221207289|ref|ZP_03580299.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221213427|ref|ZP_03586402.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|160340927|gb|ABX14013.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC
           17616]
 gi|189335751|dbj|BAG44821.1| putative ABC transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221166879|gb|EED99350.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD1]
 gi|221172877|gb|EEE05314.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2]
 gi|221178452|gb|EEE10861.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           multivorans CGD2M]
          Length = 255

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIITMPLLAAIFNAVGVLGGYFVGVVL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|183221249|ref|YP_001839245.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911340|ref|YP_001962895.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776016|gb|ABZ94317.1| Membrane protein of an ABC transporter complex [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779671|gb|ABZ97969.1| ABC-type transport system, permease; putative resistance to organic
           solvant; putative membrane protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 258

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 4/246 (1%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             + +G  +         S++       ++ QM+  GV  + VV ++S  TG ++     
Sbjct: 12  LLYAIGYTVLLLFRAIGQSHQLYFKRREILEQMFIAGVGSLFVVSIVSVFTGMILGLNTG 71

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGAE     L++I   RE+   +T++++A   GSA+ AEIG+MK++EEIDA+  M
Sbjct: 72  LGLRDFGAEGQIGLLLTITLTREMSPFMTSLILAASVGSAMAAEIGTMKVSEEIDALEVM 131

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF----SRFHS 303
            +  +R L+ PRI    + +P+L + +    I+G  IV      I    +F     R  S
Sbjct: 132 SISPIRYLVMPRIVGFSLMVPVLCVYSAALGILGGGIVGHFQLGIDIISYFQDVYYRISS 191

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              L +++ GL+K      +I  ++  +G      +  +G+     VV S  +VI    +
Sbjct: 192 VPGLKDLYVGLLKGYVFGLSIATISCSQGLRTEGGAIGVGQTTRKAVVTSFLMVIFSGYV 251

Query: 364 FAIFYF 369
               ++
Sbjct: 252 LTALFY 257


>gi|317504956|ref|ZP_07962905.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella salivae DSM 15606]
 gi|315663948|gb|EFV03666.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella salivae DSM 15606]
          Length = 252

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 1/249 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                +     G  +       A   + + F     ++M  +GV  + +V+LISF  GAV
Sbjct: 4   FKPLYNYLTTFGSYLILMWRSLAIPDRMRMFFKRYTKEMSQLGVDSIGIVLLISFFIGAV 63

Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++
Sbjct: 64  ICIQMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 123

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I  L+  +P L I ++   I+GA    +  + +        
Sbjct: 124 IDALDIMGVNSANYLILPKILGLVTMMPFLVIFSSALGILGAYSTAYIGHLLTPDDLTLG 183

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              +     I+  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  
Sbjct: 184 IQHSFNSWFIWMSILKSMFFAFIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFS 243

Query: 361 DSLFAIFYF 369
           D        
Sbjct: 244 DVFLTQLLS 252


>gi|51210044|ref|YP_063708.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
           var. liui]
 gi|50657798|gb|AAT79783.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
           var. liui]
          Length = 252

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 1/246 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                   I    +  ++         S++ Q+  VG   + +VI+ +F  G V   Q  
Sbjct: 1   MFKFFRSCIYFKIKKKSAIELLHSSYFSVLEQIKIVGPDSLNIVIITAFFLGMVFTIQIV 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +     A      +++I  +RE+  +LT+V+I GR  S   AE+ +M + E+++A+  +
Sbjct: 61  KEFLYINAAALIGSVLTIAFIRELSPVLTSVIIVGRIASYFTAELATMSVTEQLNALYLL 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
             + ++ L+ PR+ A I+ LP L I +  +++  +S + +  Y I   +FF    S+  +
Sbjct: 121 ETNPLKYLVLPRVIACILMLPCLNIFSFITSLFSSSFICFTVYSIHPEIFFVSSFSSLIV 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-I 366
            +IF  L+K       I  ++   G      +  +GK  T  VV S+  V I D L + I
Sbjct: 181 QDIFKSLLKTIVFGFLIASISCFWGLKATGGAKGVGKSTTLSVVTSLLAVFIFDFLLSYI 240

Query: 367 FYFAIG 372
            +  +G
Sbjct: 241 MFSKLG 246


>gi|332140253|ref|YP_004425991.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550275|gb|AEA96993.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 258

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K        +  +   +G           +  + K  +   I+Q+Y VGV  + ++++  
Sbjct: 2   KFFQSTGAKTIGKITAIGRAALMLFGALIAIPRAK-NIPLTIKQLYVVGVQSLLIIMVSG 60

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 61  LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 120

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA ++++P+L I+ +   I+G  +V   +  +   
Sbjct: 121 KATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVDWLGVDAG 180

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   ST     ++  G+IK+   A  +  +A+ +G+     S  + K  T  VV S 
Sbjct: 181 SYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATTETVVYSS 240

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ +D +     F I
Sbjct: 241 LAVLGLDFVLTALMFGI 257


>gi|152996434|ref|YP_001341269.1| hypothetical protein Mmwyl1_2412 [Marinomonas sp. MWYL1]
 gi|150837358|gb|ABR71334.1| protein of unknown function DUF140 [Marinomonas sp. MWYL1]
          Length = 260

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/252 (28%), Positives = 129/252 (51%), Gaps = 2/252 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNT-GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           K I             +G               +FK  +  L++Q+Y VGV  + ++I+ 
Sbjct: 2   KSIELLGASLLDWLEAVGRAGIFLVQSIFRLPVRFKESVNLLVKQLYSVGVLSLVIIIVS 61

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
               G V++ QG   L++FG+E     L+++  LRE+  ++TA++ AGR+GS++ AEIG 
Sbjct: 62  GAFIGMVLSLQGYSILAKFGSEEAVGQLLALSLLRELSPVVTALLFAGRAGSSLTAEIGL 121

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK  E++ +   MG+D +R +I+PR  A +I LP+L+++ + S I+G  +V  ++  +  
Sbjct: 122 MKATEQLSSFEMMGVDPLRRVIAPRFIAGVICLPILSLIFSASGILGGHLVSVQWLGVYD 181

Query: 295 AVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             F+S    +     +I  GLIKA   +  +  +A+ +G+     S  +GK  T  VV  
Sbjct: 182 GAFWSSMQQSVYFDTDIMNGLIKALCFSVVVTWIAVYQGYECVPTSEGIGKATTRTVVLG 241

Query: 354 ISIVIIIDSLFA 365
              ++ +D +  
Sbjct: 242 SLAILALDFILT 253


>gi|329942978|ref|ZP_08291752.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10]
 gi|313848135|emb|CBY17136.1| putative permease component of ABC transporter [Chlamydophila
           psittaci RD1]
 gi|325506979|gb|ADZ18617.1| putative permease component of ABC transporter [Chlamydophila
           psittaci 6BC]
 gi|328814525|gb|EGF84515.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10]
 gi|328914810|gb|AEB55643.1| ABC transporter, permease protein, putative [Chlamydophila psittaci
           6BC]
          Length = 261

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 116/253 (45%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +     C     LG  +  T     S    K    S+  Q Y +GV+ +PVV+L   VTG
Sbjct: 8   RIFQILCVFPLELGRWMGFTCAVIKSFSWKKSLFRSISIQGYDIGVASLPVVMLTGAVTG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 68  IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A I+++P L I A +S I    ++    + +   V+  
Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIMAMPALVIAAVWSGIFCGYLLCRYAFQLSAQVYLH 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  L++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 188 MVSGNVFLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 248 ANCVITAFFHVLG 260


>gi|89898182|ref|YP_515292.1| ABC transporter [Chlamydophila felis Fe/C-56]
 gi|89331554|dbj|BAE81147.1| ABC transporter [Chlamydophila felis Fe/C-56]
          Length = 261

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 117/253 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +      +    LG  +  T     S    K  L S   Q Y +GV+ +PVV+L   VTG
Sbjct: 8   RIFRILYTFPLELGRWMGFTYAVIKSFSWKKSLLRSTSMQGYDIGVASLPVVMLTGAVTG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 68  IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A II++P L I A ++ I    ++    + +P  V+  
Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWAGIFCGYLLCRCAFQLPAHVYLH 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 188 MVSGNVLISDIVMVIVKSLVFGFIITSLACYQGLGKHCRIMDVAKVTTAGVVTSYISILF 247

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 248 ANCVITTFFHLLG 260


>gi|118594041|ref|ZP_01551388.1| hypothetical protein MB2181_00195 [Methylophilales bacterium
           HTCC2181]
 gi|118439819|gb|EAV46446.1| hypothetical protein MB2181_00195 [Methylophilales bacterium
           HTCC2181]
          Length = 261

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I    +   S+   LG            S      +   IR++Y+ GV  + ++I+ +F 
Sbjct: 8   IAGVGSSFRSKMTRLGAGTRLFFLILIYSVDSFKRIGLTIREIYFTGVLSLVIIIVSAFF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+AI AEIG MK 
Sbjct: 68  VGMVLGLQGYYTLEKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGTAITAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M +  V  +I+PR WA +IS+P+L  + +   I+G   +      +    F
Sbjct: 128 TEQLSAMEVMAVSPVARIIAPRFWAGMISMPILATIFSMVGILGGYFIAVLVIGVDEGAF 187

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +    + +I  G IK+     A  I+A+ EGF     +  + +  T  VV S   
Sbjct: 188 WSQMQANVDFSNDIVDGAIKSIVFGFACTIIALFEGFDAPPTAEGVSRATTRTVVISSLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +   F F 
Sbjct: 248 VLGLDFILTSFMFV 261


>gi|292490486|ref|YP_003525925.1| hypothetical protein Nhal_0342 [Nitrosococcus halophilus Nc4]
 gi|291579081|gb|ADE13538.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4]
          Length = 260

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +++           LG                      LI QMY VGV  +P++++   
Sbjct: 4   ALLRLGRWGLGTFERLGRGHLFLARLLLGIAALLLRFPLLIAQMYSVGVLTLPIIVVSGA 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L  FGAE     ++S+  +RE+G +++A++ AGR+GSA+ AEIG MK
Sbjct: 64  FVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++  +  M +D +R + +PR +A   S+PLL  + +   ++G   V      +    
Sbjct: 124 ATEQLSGMEMMAVDPMRRVAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEGA 183

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+  +      +I  G+IK+      +  +A+ EG+     S  + +  T  VV S  
Sbjct: 184 FWSQMQANTDWEEDILNGVIKSLVFGLVVTWIAVFEGYDTAPTSEGVARATTRTVVHSAF 243

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 244 AVLALDFVLTALMFG 258


>gi|158337358|ref|YP_001518533.1| hypothetical protein AM1_4236 [Acaryochloris marina MBIC11017]
 gi|158307599|gb|ABW29216.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 249

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 1/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             I   G+      + K    + I QM  VG   + V +L +   G V   Q A +   F
Sbjct: 3   AAIFLGGQVVVHLLRGKIHRRNTIEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAF 62

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  +LTAV+I GR  SA  AEIG+M++ E+IDA++ +  D V 
Sbjct: 63  GLVQTVGGVLALALTRELAPVLTAVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVD 122

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + LP+LT+++  + + G  +V    YDIP++VF    HS   + +I+  
Sbjct: 123 YLVVPRLLACTLMLPILTLISLVAGVTGGMVVASVLYDIPYSVFLDSVHSFLGVWDIWNS 182

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
           +IKA      I IV    G      +  +G+  T  VV ++ +V + +   + + +   G
Sbjct: 183 MIKAAIFGGIIAIVGSSWGLTTYGGAKGVGQSTTAAVVTALVMVFMTNFFLSWVMFQGAG 242


>gi|322515301|ref|ZP_08068298.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinobacillus ureae ATCC
           25976]
 gi|322118677|gb|EFX90889.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Actinobacillus ureae ATCC
           25976]
          Length = 258

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 122/239 (51%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G              +F+     LI+Q+Y +GV  + +++L     G V+  QG   L 
Sbjct: 19  FGRATFMLFGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLV 78

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            F AE     L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D 
Sbjct: 79  DFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDP 138

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +R +I+PR WA +IS+P+L  +     I G S+V   +  +    F+S   ++   +++ 
Sbjct: 139 LRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLI 198

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            G IK+   A A+  +A+  G+     S  + +  T  VV +  +V+ +D +     F 
Sbjct: 199 NGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 257


>gi|320174559|gb|EFW49695.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           dysenteriae CDC 74-1112]
          Length = 260

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRTGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|121998898|ref|YP_001003685.1| hypothetical protein Hhal_2119 [Halorhodospira halophila SL1]
 gi|121590303|gb|ABM62883.1| protein of unknown function DUF140 [Halorhodospira halophila SL1]
          Length = 258

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                + +    LG  +   G    ++ +       LI Q+Y VGV  + ++++ +   G
Sbjct: 7   ALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRPRLLIEQVYAVGVLSLVIILVSALFVG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L+ FGA      ++++  +RE+G ++TA++ AGR+GS++ AE+G MK  E
Sbjct: 67  MVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVVTALLFAGRAGSSLTAEVGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ ++  M +D  R +++PR +A ++++PLL  + +   + G  +V      I    F+S
Sbjct: 127 QLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFSAVGVFGGYLVAVGMVGIDSGAFWS 186

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
              +  T+  +I  G+IK+      +G +A+ +G+     S+ + +  T  VV +   V+
Sbjct: 187 NMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRATTLGVVHASLAVL 246

Query: 359 IIDSLFAIFYF 369
            +D L     F
Sbjct: 247 GLDFLLTALMF 257


>gi|78184152|ref|YP_376587.1| hypothetical protein Syncc9902_0575 [Synechococcus sp. CC9902]
 gi|78168446|gb|ABB25543.1| Protein of unknown function DUF140 [Synechococcus sp. CC9902]
          Length = 249

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L  Q+   G   + +V +IS   G+V   Q A +L+
Sbjct: 10  LGSSLLIGGQAVTATMRGRINTVDLSDQLMEAGPGSLLIVFIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLTA ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ AL++  PL        A+    I     Y+IP +VF++   +     ++ 
Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  ++   G         +G   T  VV  + +V I+D +     F 
Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTKGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248


>gi|84387816|ref|ZP_00990831.1| putative ABC superfamily transport protein [Vibrio splendidus
           12B01]
 gi|84377331|gb|EAP94199.1| putative ABC superfamily transport protein [Vibrio splendidus
           12B01]
          Length = 259

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I      + +     G              + K      ++Q+Y VGV  + ++++  
Sbjct: 4   KAIAGVGKRTLAICESFGRASLMLFGALFGIPRLK-NFPLFVKQLYSVGVQSLAIILVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I GA +V   +  I   
Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I    IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 183 SFWSAMQSSVELGRDIGNSTIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 LAVLGLDFVLTALMFG 258


>gi|163732016|ref|ZP_02139462.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149]
 gi|161394314|gb|EDQ18637.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149]
          Length = 256

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 108/250 (43%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                     +G +    G+  +   +   +    + Q+  +G   +PVV L +  TG  
Sbjct: 7   GRVIMGALAAIGRIAIFGGQCISHLVRPPFYGREFVTQLVNIGWLSLPVVGLTALFTGGA 66

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     S+F AE     ++++  +RE+G +L  +MIA R  S+I AEI +MK+ E+I
Sbjct: 67  LALQIYAGGSRFNAESVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 126

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+    ++ L  PR+ A ++ +PLL  + +   I G   V         A + +  
Sbjct: 127 DALVTLSTHPMKYLTVPRVLAAVLVVPLLVAIGDIIGIFGGYAVATGTLGFNAATYINNT 186

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +     ++ + L K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 187 VNFLEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAILILAAN 246

Query: 362 SLFAIFYFAI 371
            +    +F +
Sbjct: 247 FVLTGVFFTL 256


>gi|218710669|ref|YP_002418290.1| ABC transport protein: transmembrane protein (IM) [Vibrio
           splendidus LGP32]
 gi|218323688|emb|CAV20020.1| ABC transport protein: transmembrane protein (IM) [Vibrio
           splendidus LGP32]
          Length = 261

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I      + +     G              K K     L++Q Y VGV  + ++++  
Sbjct: 6   KTIAGVGKRALAICESFGRASLMLFGALFGIPKLK-NFPLLVKQFYSVGVQSLAIILVSG 64

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 65  LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 124

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I GA +V   +  I   
Sbjct: 125 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 184

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 185 SFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 244

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 245 LAVLGLDFVLTALMFG 260


>gi|261880035|ref|ZP_06006462.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella bergensis DSM 17361]
 gi|270333275|gb|EFA44061.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Prevotella bergensis DSM 17361]
          Length = 252

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 11  LTTFGNYLILMGRAFSRPERMRMFLKRYVKEMAQLGVDSIGIVLLISFFIGAVICIQMKV 70

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 71  NIQSPWMPRWVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 130

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++   I+GA    +    +  A   +  + +   
Sbjct: 131 GINSASYLILPKIAGLVTIMPFLVIFSSAMGIVGAYATAYIGQLMSPADLTAGMNHSFNE 190

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V+   G++V   S  +G+  T  VV S  +++  D      
Sbjct: 191 WYMWMSIIKSLFFAFIIASVSSYFGYSVKGGSVDVGEASTDAVVSSSVLILFSDVFLTQL 250

Query: 368 YF 369
             
Sbjct: 251 LS 252


>gi|74313731|ref|YP_312150.1| hypothetical protein SSON_3342 [Shigella sonnei Ss046]
 gi|73857208|gb|AAZ89915.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 260

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDTIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|37527885|ref|NP_931230.1| hypothetical protein plu4033 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787321|emb|CAE16405.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 260

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +       G              +       L +Q+Y VGV  + ++I+  
Sbjct: 4   QALAALGRRAIEVFASFGRAGFMLFRAIIGKPEPARQWPLLRQQLYSVGVRSLLIIIVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     +++I  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILTTYSAEASLGMMVAISLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I G ++V   +  I   
Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIWGGAMVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|170078977|ref|YP_001735615.1| ABC-type toluene export system, permease component [Synechococcus
           sp. PCC 7002]
 gi|169886646|gb|ACB00360.1| ABC-type toluene export system, permease component [Synechococcus
           sp. PCC 7002]
          Length = 259

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 107/221 (48%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
              G+      + K     +  QM   G   +  V+L++F  G +   Q A +L+ FGAE
Sbjct: 21  LMLGQVLWRLLRGKLRRDQITEQMLTAGPKALVPVLLVAFFGGMIFTIQTARELTTFGAE 80

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
            F     +I   RE+  +LTA +IAG+ GSA  AE+GSMKI E+IDA+  +  + V  L+
Sbjct: 81  SFVGGAFAIAFCRELAPILTASIIAGQVGSAFAAELGSMKITEQIDALYMLRSNPVDYLV 140

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            PR+ A  + LP+LT+ A    +IG +   +++YD+    F +   +     ++    +K
Sbjct: 141 MPRVVACCLMLPILTVFALVVGVIGGTGAAYQFYDLAPINFLTSVQTFLQPRDLINVGVK 200

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  +GI+    G      +  +G+  T+ VV +   +
Sbjct: 201 GILFGLLVGIIGCSWGLTTVGSTQQVGRSATSAVVTTWIGI 241


>gi|239994339|ref|ZP_04714863.1| putative transport protein (ABC superfamily, membrane) [Alteromonas
           macleodii ATCC 27126]
          Length = 258

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 131/257 (50%), Gaps = 2/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K        +  +   +G           +  + K  +  +I+Q+Y VGV  + ++++  
Sbjct: 2   KFFQSIGAKTIGKVTAVGRAALMLFGALIAVPRLK-NVPLVIKQLYVVGVQSLLIIMVSG 60

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 61  LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 120

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA ++++P+L I+ +   I+G  +V   +  +   
Sbjct: 121 KATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVDWLGVDAG 180

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S   ST     ++  G+IK+   A  +  +A+ +G+     S  + K  T  VV S 
Sbjct: 181 SYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATTETVVYSS 240

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ +D +     F I
Sbjct: 241 LAVLGLDFVLTALMFGI 257


>gi|116071211|ref|ZP_01468480.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107]
 gi|116066616|gb|EAU72373.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107]
          Length = 249

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 114/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L  Q+   G   + +V++IS   G+V   Q A +L+
Sbjct: 10  LGASLLIGGQAVTATMRGRINTVELSDQLMEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  LLTA ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILALGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ AL++  PL        A+    I     Y+IP +VF++   +     ++ 
Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  ++   G         +G   T  VV  + +V I+D +     F 
Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTRGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248


>gi|317403202|gb|EFV83724.1| membrane protein [Achromobacter xylosoxidans C54]
          Length = 262

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 128/263 (48%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G  +   I          G +++ +G   +           + +Q++++G   +
Sbjct: 6   NAIGALGGWVRTRIAGVGFFTRFFGAMLARSGIALSRP-------RLVSQQIHFIGNYSL 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L+++GAE     L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 59  LIIAVSGMFVGFVLGLQGYYTLNRYGAEESLGLLVALSLVRELGPVVTALLFAGRAGTSL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   I+G  +V   
Sbjct: 119 TAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+      +  ++  G+IK+      + +VA+ EG+        + +  T
Sbjct: 179 MIGVDAGAFWSQMQGGVDVWNDVVNGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV     V+ +D L     F 
Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261


>gi|327402880|ref|YP_004343718.1| hypothetical protein Fluta_0879 [Fluviicola taffensis DSM 16823]
 gi|327318388|gb|AEA42880.1| protein of unknown function DUF140 [Fluviicola taffensis DSM 16823]
          Length = 246

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 1/245 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G          +   K++ F      +M  +G+  +P+V L+S   GAVIA Q
Sbjct: 1   MGIIQNIGKYFMMMYIVFSKPEKWRIFRRRFFEEMEIIGIKSIPIVALMSAFMGAVIALQ 60

Query: 186 GAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  +       +    +     + E    + ++++AG+ GS I +E+G+M++ E+IDA+
Sbjct: 61  TASNMDNPLLPAYTVGFITRSSTILEFSPTIISLILAGKVGSNIASEVGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P++ + +I  P+L I +   ++IG  + +          +       
Sbjct: 121 EIMGVNSLSYLVLPKVTSAMIFFPILIIFSIGLSLIGGWLSLQLSGLSSTEEYVYGIRFF 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++I   L K    A  I  +A  +G+     +  +GK  T  VV +   ++I +   
Sbjct: 181 FKGSDIIYALGKTVVFAFLITSIASFKGYYTKGGALDVGKSSTEAVVSASVAILISNFFL 240

Query: 365 AIFYF 369
              + 
Sbjct: 241 TQMFL 245


>gi|254423355|ref|ZP_05037073.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196190844|gb|EDX85808.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 264

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 1/239 (0%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            I   G+             + I QM  VG   + + ++ S   G V   Q   +   FG
Sbjct: 20  AILLGGQVIIHVISKPIHRRNTIEQMSAVGPESLLIALVTSVFVGMVFTIQVTREFITFG 79

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A      +++I   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA++ +  D V  
Sbjct: 80  ATTAIGGVLAITLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALQMLRSDPVDY 139

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  + +P+L +LA  + ++G  +V    Y IPFAVF +   +  T+ ++   L
Sbjct: 140 LVIPRVIACALMVPMLNVLAIITGLLGGLVVATTLYAIPFAVFLNSARNFLTIWDLAASL 199

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
           IK+      I ++    G      +  +G+  TT VV S+  + + +   + + +  +G
Sbjct: 200 IKSLIFGVLIAVIGSSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVSNFFLSWMMFQGMG 258


>gi|237708018|ref|ZP_04538499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725290|ref|ZP_04555771.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265754195|ref|ZP_06089384.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|229436556|gb|EEO46633.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229458004|gb|EEO63725.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234904|gb|EEZ20459.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 251

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 1/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I   G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  Q    + 
Sbjct: 12  VGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 71

Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  MG++
Sbjct: 72  SPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 131

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I AL+  +P L I + FS IIGA    W    +           +     +
Sbjct: 132 SAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 191

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 192 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 251


>gi|82778508|ref|YP_404857.1| hypothetical protein SDY_3375 [Shigella dysenteriae Sd197]
 gi|170765889|ref|ZP_02900700.1| toluene ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|81242656|gb|ABB63366.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|170125035|gb|EDS93966.1| toluene ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 260

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|114564855|ref|YP_752369.1| hypothetical protein Sfri_3703 [Shewanella frigidimarina NCIMB 400]
 gi|114336148|gb|ABI73530.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB
           400]
          Length = 264

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 5/256 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +      +      +GL         +S +        +I+Q+Y++G   + V+I+ + 
Sbjct: 7   SVSNLGAATRKNIDSIGLATLFLLRIVSSLFTGLVSFKQVIKQIYFIGNRSLIVIIVAAL 66

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG V+A Q    L +FG+       +++  ++E+G ++TA+M+  R GSA  +EIG M+
Sbjct: 67  FTGMVVALQFYDTLVRFGSVDLLGSAVALSLIKELGPVMTALMVIARVGSATCSEIGIMR 126

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             ++ DA+  M ++  R ++ PR+ A +  +P+LT + +   I G  IV           
Sbjct: 127 NEQQFDALDCMAINSYRYVMLPRLLAALFCVPMLTAVFDLVGIGGGYIVGVHIQGESPGA 186

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVV 351
           +      T +  ++  G IK+      I  + +  GF +      + +  +    T  VV
Sbjct: 187 YIQGVMDTISFKDVLVGQIKSLVFGLFIMWIPLYYGFYLHLNQKNMGAEGVSNGTTQAVV 246

Query: 352 QSISIVIIIDSLFAIF 367
            S  I++  D + +  
Sbjct: 247 MSAIIMLFSDYIVSSL 262


>gi|255530709|ref|YP_003091081.1| hypothetical protein Phep_0797 [Pedobacter heparinus DSM 2366]
 gi|255343693|gb|ACU03019.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366]
          Length = 269

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 108/231 (46%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
               F    +        L RQ Y +G     ++    F+TG V  +Q    LS+FGA  
Sbjct: 34  FIARFFKEGFLPPYEARELFRQCYEIGYRSALLISTTGFITGIVFTKQSRPSLSEFGATS 93

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           +   L+ I  LR +  LLT ++ AG+ GS+I AE+GSM++ E+IDA+     +  + L+S
Sbjct: 94  WLPSLVGIALLRTLAPLLTGLIAAGKVGSSIGAELGSMRVTEQIDAMEVSATNPFKFLVS 153

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            R+ A  I++P+LT       ++GA + +          FF       T  +I    +KA
Sbjct: 154 TRVLAATITIPILTFYTAMVGMLGALLNVSLSEGTSARAFFQSSLEQITFLDITASTVKA 213

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
                 IG+V   +G+     +  +GK   + VV ++ ++ I + +   F+
Sbjct: 214 ILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIAMFLIFIEEVVSVQFF 264


>gi|15803734|ref|NP_289768.1| hypothetical protein Z4557 [Escherichia coli O157:H7 EDL933]
 gi|15833327|ref|NP_312100.1| hypothetical protein ECs4073 [Escherichia coli O157:H7 str. Sakai]
 gi|16131084|ref|NP_417661.1| ABC transporter maintaining OM lipid asymmetry, inner membrane
           permease protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24114483|ref|NP_708993.1| integral membrane protein [Shigella flexneri 2a str. 301]
 gi|26249780|ref|NP_755820.1| hypothetical protein c3954 [Escherichia coli CFT073]
 gi|30064532|ref|NP_838703.1| integral membrane protein [Shigella flexneri 2a str. 2457T]
 gi|82545568|ref|YP_409515.1| hypothetical protein SBO_3188 [Shigella boydii Sb227]
 gi|89109957|ref|AP_003737.1| predicted toluene transporter subunit [Escherichia coli str. K-12
           substr. W3110]
 gi|91212619|ref|YP_542605.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89]
 gi|110643434|ref|YP_671164.1| hypothetical protein ECP_3281 [Escherichia coli 536]
 gi|110807060|ref|YP_690580.1| integral membrane protein [Shigella flexneri 5 str. 8401]
 gi|117625486|ref|YP_858809.1| putative toluene transporter subunit: permease component
           [Escherichia coli APEC O1]
 gi|157156689|ref|YP_001464672.1| toluene ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|157162678|ref|YP_001459996.1| toluene ABC transporter, permease protein [Escherichia coli HS]
 gi|168751600|ref|ZP_02776622.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168754176|ref|ZP_02779183.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168763731|ref|ZP_02788738.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168769050|ref|ZP_02794057.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168777249|ref|ZP_02802256.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168781338|ref|ZP_02806345.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168786080|ref|ZP_02811087.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|168800908|ref|ZP_02825915.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|170018556|ref|YP_001723510.1| hypothetical protein EcolC_0506 [Escherichia coli ATCC 8739]
 gi|170082728|ref|YP_001732048.1| toluene ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170684208|ref|YP_001745466.1| toluene ABC transporter permease [Escherichia coli SMS-3-5]
 gi|187733158|ref|YP_001881891.1| toluene ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|188492313|ref|ZP_02999583.1| toluene ABC transporter, permease protein [Escherichia coli 53638]
 gi|191168635|ref|ZP_03030417.1| toluene ABC transporter, permease protein [Escherichia coli B7A]
 gi|191174475|ref|ZP_03035975.1| toluene ABC transporter, permease protein [Escherichia coli F11]
 gi|193070286|ref|ZP_03051229.1| toluene ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194429132|ref|ZP_03061662.1| toluene ABC transporter, permease protein [Escherichia coli B171]
 gi|194434508|ref|ZP_03066768.1| toluene ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194439172|ref|ZP_03071253.1| toluene ABC transporter, permease protein [Escherichia coli 101-1]
 gi|195940050|ref|ZP_03085432.1| toluene ABC transporter membrane protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208805807|ref|ZP_03248144.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208814152|ref|ZP_03255481.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208818401|ref|ZP_03258721.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209399676|ref|YP_002272664.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209920669|ref|YP_002294753.1| putative ABC transporter permease [Escherichia coli SE11]
 gi|215488510|ref|YP_002330941.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|217327544|ref|ZP_03443627.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218555764|ref|YP_002388677.1| toluene ABC transporter membrane protein [Escherichia coli IAI1]
 gi|218560264|ref|YP_002393177.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218691484|ref|YP_002399696.1| toluene ABC transporter membrane protein [Escherichia coli ED1a]
 gi|218696899|ref|YP_002404566.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218701963|ref|YP_002409592.1| toluene ABC transporter membrane protein [Escherichia coli IAI39]
 gi|218706814|ref|YP_002414333.1| toluene ABC transporter membrane protein [Escherichia coli UMN026]
 gi|227887915|ref|ZP_04005720.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Escherichia coli 83972]
 gi|237706054|ref|ZP_04536535.1| integral membrane protein [Escherichia sp. 3_2_53FAA]
 gi|238902296|ref|YP_002928092.1| putative toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|253771972|ref|YP_003034803.1| hypothetical protein ECBD_0548 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038359|ref|ZP_04872417.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43]
 gi|254163136|ref|YP_003046244.1| putative toluene transporter subunit membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|254795143|ref|YP_003079980.1| putative toluene ABC transporter membrane protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|256018887|ref|ZP_05432752.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Shigella sp. D9]
 gi|256024231|ref|ZP_05438096.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Escherichia sp. 4_1_40B]
 gi|260846007|ref|YP_003223785.1| putative toluene transporter subunit [Escherichia coli O103:H2 str.
           12009]
 gi|260857321|ref|YP_003231212.1| putative toluene transporter subunit [Escherichia coli O26:H11 str.
           11368]
 gi|260869945|ref|YP_003236347.1| putative toluene transporter subunit [Escherichia coli O111:H- str.
           11128]
 gi|261228205|ref|ZP_05942486.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255061|ref|ZP_05947594.1| putative toluene transporter subunit [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284568|ref|YP_003501386.1| hypothetical protein G2583_3919 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406803|ref|ZP_06650729.1| ABC transporter [Escherichia coli FVEC1412]
 gi|293412565|ref|ZP_06655288.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293416623|ref|ZP_06659262.1| inner membrane protein yrbE [Escherichia coli B185]
 gi|293449527|ref|ZP_06663948.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088]
 gi|298382544|ref|ZP_06992141.1| ABC transport system permease [Escherichia coli FVEC1302]
 gi|300817551|ref|ZP_07097767.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1]
 gi|300823840|ref|ZP_07103964.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7]
 gi|300897962|ref|ZP_07116338.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1]
 gi|300904386|ref|ZP_07122234.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1]
 gi|300918956|ref|ZP_07135511.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1]
 gi|300926061|ref|ZP_07141883.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1]
 gi|300929890|ref|ZP_07145332.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1]
 gi|300938110|ref|ZP_07152884.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1]
 gi|300948849|ref|ZP_07162914.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1]
 gi|300955783|ref|ZP_07168125.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1]
 gi|300979957|ref|ZP_07174809.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1]
 gi|300990924|ref|ZP_07179376.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1]
 gi|301022096|ref|ZP_07186022.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1]
 gi|301025904|ref|ZP_07189391.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1]
 gi|301047959|ref|ZP_07195004.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1]
 gi|301306740|ref|ZP_07212794.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1]
 gi|301326373|ref|ZP_07219737.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1]
 gi|301644908|ref|ZP_07244877.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1]
 gi|306816464|ref|ZP_07450596.1| toluene ABC transporter, permease protein [Escherichia coli NC101]
 gi|307139880|ref|ZP_07499236.1| toluene ABC transporter, permease protein [Escherichia coli H736]
 gi|307313101|ref|ZP_07592727.1| protein of unknown function DUF140 [Escherichia coli W]
 gi|309793773|ref|ZP_07688199.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7]
 gi|312968467|ref|ZP_07782676.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75]
 gi|312972532|ref|ZP_07786706.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70]
 gi|331643892|ref|ZP_08345023.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H736]
 gi|331648994|ref|ZP_08350082.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M605]
 gi|331654798|ref|ZP_08355798.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M718]
 gi|331659481|ref|ZP_08360423.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA206]
 gi|331664807|ref|ZP_08365712.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA143]
 gi|331670021|ref|ZP_08370866.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA271]
 gi|331674724|ref|ZP_08375483.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA280]
 gi|331679273|ref|ZP_08379945.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H591]
 gi|331684841|ref|ZP_08385433.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H299]
 gi|54040598|sp|P64607|MLAE_ECOL6 RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54040599|sp|P64608|MLAE_ECO57 RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54040600|sp|P64609|MLAE_SHIFL RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|54042861|sp|P64606|MLAE_ECOLI RecName: Full=Probable phospholipid ABC transporter permease
           protein mlaE
 gi|12517809|gb|AAG58328.1|AE005547_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26110208|gb|AAN82394.1|AE016767_154 Hypothetical protein yrbE [Escherichia coli CFT073]
 gi|606132|gb|AAA57995.1| ORF_f260 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789585|gb|AAC76226.1| ABC transporter maintaining OM lipid asymmetry, inner membrane
           permease protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13363546|dbj|BAB37496.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|24053666|gb|AAN44700.1| integral membrane protein [Shigella flexneri 2a str. 301]
 gi|30042791|gb|AAP18514.1| integral membrane protein [Shigella flexneri 2a str. 2457T]
 gi|81246979|gb|ABB67687.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|85675988|dbj|BAE77238.1| predicted toluene transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|91074193|gb|ABE09074.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89]
 gi|110345026|gb|ABG71263.1| putative membrane protein [Escherichia coli 536]
 gi|110616608|gb|ABF05275.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|115514610|gb|ABJ02685.1| putative toluene transporter subunit: permease component
           [Escherichia coli APEC O1]
 gi|157068358|gb|ABV07613.1| toluene ABC transporter, permease protein [Escherichia coli HS]
 gi|157078719|gb|ABV18427.1| toluene ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|169753484|gb|ACA76183.1| protein of unknown function DUF140 [Escherichia coli ATCC 8739]
 gi|169890563|gb|ACB04270.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170521926|gb|ACB20104.1| toluene ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|187430150|gb|ACD09424.1| toluene ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
 gi|187767468|gb|EDU31312.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188014389|gb|EDU52511.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4113]
 gi|188487512|gb|EDU62615.1| toluene ABC transporter, permease protein [Escherichia coli 53638]
 gi|189001139|gb|EDU70125.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189358631|gb|EDU77050.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189361791|gb|EDU80210.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189366134|gb|EDU84550.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189373916|gb|EDU92332.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC869]
 gi|189376865|gb|EDU95281.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC508]
 gi|190901329|gb|EDV61096.1| toluene ABC transporter, permease protein [Escherichia coli B7A]
 gi|190905230|gb|EDV64869.1| toluene ABC transporter, permease protein [Escherichia coli F11]
 gi|192956345|gb|EDV86805.1| toluene ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194412857|gb|EDX29149.1| toluene ABC transporter, permease protein [Escherichia coli B171]
 gi|194417287|gb|EDX33396.1| toluene ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194421868|gb|EDX37874.1| toluene ABC transporter, permease protein [Escherichia coli 101-1]
 gi|208725608|gb|EDZ75209.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208735429|gb|EDZ84116.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208738524|gb|EDZ86206.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209161076|gb|ACI38509.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209758098|gb|ACI77361.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758100|gb|ACI77362.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758102|gb|ACI77363.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758104|gb|ACI77364.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209758106|gb|ACI77365.1| hypothetical protein ECs4073 [Escherichia coli]
 gi|209913928|dbj|BAG79002.1| putative ABC transporter permease component [Escherichia coli SE11]
 gi|215266582|emb|CAS11021.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|217319911|gb|EEC28336.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7
           str. TW14588]
 gi|218353631|emb|CAU99839.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218362532|emb|CAR00156.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli IAI1]
 gi|218367033|emb|CAR04804.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218371949|emb|CAR19805.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli IAI39]
 gi|218429048|emb|CAR09855.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli ED1a]
 gi|218433911|emb|CAR14828.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli UMN026]
 gi|222034911|emb|CAP77654.1| UPF0393 inner membrane protein yrbE [Escherichia coli LF82]
 gi|226839983|gb|EEH72004.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43]
 gi|226899094|gb|EEH85353.1| integral membrane protein [Escherichia sp. 3_2_53FAA]
 gi|227835311|gb|EEJ45777.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Escherichia coli 83972]
 gi|238863136|gb|ACR65134.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|242378737|emb|CAQ33527.1| MlaE, subunit of phospholipid ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253323016|gb|ACT27618.1| protein of unknown function DUF140 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975037|gb|ACT40708.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli B str. REL606]
 gi|253979193|gb|ACT44863.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BL21(DE3)]
 gi|254594543|gb|ACT73904.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257755970|dbj|BAI27472.1| predicted toluene transporter subunit [Escherichia coli O26:H11
           str. 11368]
 gi|257761154|dbj|BAI32651.1| predicted toluene transporter subunit [Escherichia coli O103:H2
           str. 12009]
 gi|257766301|dbj|BAI37796.1| predicted toluene transporter subunit [Escherichia coli O111:H-
           str. 11128]
 gi|260447779|gb|ACX38201.1| protein of unknown function DUF140 [Escherichia coli DH1]
 gi|281180236|dbj|BAI56566.1| putative ABC transporter permease component [Escherichia coli SE15]
 gi|281602577|gb|ADA75561.1| inner membrane protein yrbE [Shigella flexneri 2002017]
 gi|284923216|emb|CBG36310.1| putative organic solvent tolerance protein [Escherichia coli 042]
 gi|290764441|gb|ADD58402.1| UPF0393 inner membrane protein yrbE [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322617|gb|EFE62046.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088]
 gi|291426809|gb|EFE99841.1| ABC transporter [Escherichia coli FVEC1412]
 gi|291431979|gb|EFF04962.1| inner membrane protein yrbE [Escherichia coli B185]
 gi|291469336|gb|EFF11827.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294493221|gb|ADE91977.1| putative ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|298277684|gb|EFI19200.1| ABC transport system permease [Escherichia coli FVEC1302]
 gi|299879926|gb|EFI88137.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1]
 gi|300300191|gb|EFJ56576.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1]
 gi|300307892|gb|EFJ62412.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1]
 gi|300317329|gb|EFJ67113.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1]
 gi|300358310|gb|EFJ74180.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1]
 gi|300397692|gb|EFJ81230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1]
 gi|300403660|gb|EFJ87198.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1]
 gi|300407000|gb|EFJ90538.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1]
 gi|300413898|gb|EFJ97208.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1]
 gi|300417919|gb|EFK01230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1]
 gi|300451654|gb|EFK15274.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1]
 gi|300456873|gb|EFK20366.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1]
 gi|300462176|gb|EFK25669.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1]
 gi|300523608|gb|EFK44677.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7]
 gi|300529849|gb|EFK50911.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1]
 gi|300838019|gb|EFK65779.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1]
 gi|300846937|gb|EFK74697.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1]
 gi|301076759|gb|EFK91565.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1]
 gi|305850029|gb|EFM50488.1| toluene ABC transporter, permease protein [Escherichia coli NC101]
 gi|306907012|gb|EFN37520.1| protein of unknown function DUF140 [Escherichia coli W]
 gi|307555287|gb|ADN48062.1| toluene ABC transporter [Escherichia coli ABU 83972]
 gi|307625207|gb|ADN69511.1| toluene ABC transporter, permease protein [Escherichia coli UM146]
 gi|308122730|gb|EFO59992.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7]
 gi|309703620|emb|CBJ02960.1| putative organic solvent tolerance protein [Escherichia coli ETEC
           H10407]
 gi|310334909|gb|EFQ01114.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70]
 gi|312286685|gb|EFR14596.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75]
 gi|312947751|gb|ADR28578.1| putative toluene transporter subunit [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|313648563|gb|EFS13005.1| toluene tolerance protein Ttg2B [Shigella flexneri 2a str. 2457T]
 gi|315062500|gb|ADT76827.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|315137780|dbj|BAJ44939.1| hypothetical protein ECDH1ME8569_3083 [Escherichia coli DH1]
 gi|315257122|gb|EFU37090.1| toluene tolerance protein Ttg2B [Escherichia coli MS 85-1]
 gi|315289007|gb|EFU48405.1| toluene tolerance protein Ttg2B [Escherichia coli MS 110-3]
 gi|315294854|gb|EFU54193.1| toluene tolerance protein Ttg2B [Escherichia coli MS 153-1]
 gi|315297940|gb|EFU57210.1| toluene tolerance protein Ttg2B [Escherichia coli MS 16-3]
 gi|315617277|gb|EFU97886.1| toluene tolerance protein Ttg2B [Escherichia coli 3431]
 gi|320181469|gb|EFW56387.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           boydii ATCC 9905]
 gi|320186681|gb|EFW61405.1| Uncharacterized ABC transporter, permease component YrbE [Shigella
           flexneri CDC 796-83]
 gi|320189547|gb|EFW64206.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. EC1212]
 gi|320194679|gb|EFW69309.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli WV_060327]
 gi|320202108|gb|EFW76683.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli EC4100B]
 gi|320645562|gb|EFX14571.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H- str. 493-89]
 gi|320650872|gb|EFX19329.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H- str. H 2687]
 gi|320656253|gb|EFX24165.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661943|gb|EFX29351.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666778|gb|EFX33757.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323154409|gb|EFZ40610.1| toluene tolerance protein Ttg2B [Escherichia coli EPECa14]
 gi|323162886|gb|EFZ48721.1| toluene tolerance protein Ttg2B [Escherichia coli E128010]
 gi|323165155|gb|EFZ50945.1| toluene tolerance protein Ttg2B [Shigella sonnei 53G]
 gi|323173546|gb|EFZ59175.1| toluene tolerance protein Ttg2B [Escherichia coli LT-68]
 gi|323178630|gb|EFZ64206.1| toluene tolerance protein Ttg2B [Escherichia coli 1180]
 gi|323183148|gb|EFZ68546.1| toluene tolerance protein Ttg2B [Escherichia coli 1357]
 gi|323189185|gb|EFZ74469.1| toluene tolerance protein Ttg2B [Escherichia coli RN587/1]
 gi|323376912|gb|ADX49180.1| protein of unknown function DUF140 [Escherichia coli KO11]
 gi|323936112|gb|EGB32406.1| inner membrane protein yrbE [Escherichia coli E1520]
 gi|323941706|gb|EGB37885.1| inner membrane protein yrbE [Escherichia coli E482]
 gi|323946952|gb|EGB42968.1| inner membrane protein yrbE [Escherichia coli H120]
 gi|323951287|gb|EGB47162.1| inner membrane protein yrbE [Escherichia coli H252]
 gi|323957659|gb|EGB53373.1| inner membrane protein yrbE [Escherichia coli H263]
 gi|323961151|gb|EGB56765.1| inner membrane protein yrbE [Escherichia coli H489]
 gi|323966374|gb|EGB61808.1| inner membrane protein yrbE [Escherichia coli M863]
 gi|323970243|gb|EGB65514.1| inner membrane protein yrbE [Escherichia coli TA007]
 gi|323979089|gb|EGB74167.1| inner membrane protein yrbE [Escherichia coli TW10509]
 gi|324008706|gb|EGB77925.1| toluene tolerance protein Ttg2B [Escherichia coli MS 57-2]
 gi|324012162|gb|EGB81381.1| toluene tolerance protein Ttg2B [Escherichia coli MS 60-1]
 gi|324018354|gb|EGB87573.1| toluene tolerance protein Ttg2B [Escherichia coli MS 117-3]
 gi|324119559|gb|EGC13441.1| inner membrane protein yrbE [Escherichia coli E1167]
 gi|326337894|gb|EGD61728.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. 1125]
 gi|326347464|gb|EGD71189.1| Uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli O157:H7 str. 1044]
 gi|327251285|gb|EGE62974.1| toluene tolerance protein Ttg2B [Escherichia coli STEC_7v]
 gi|330909246|gb|EGH37760.1| uncharacterized ABC transporter, permease component YrbE
           [Escherichia coli AA86]
 gi|331037363|gb|EGI09587.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H736]
 gi|331042741|gb|EGI14883.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M605]
 gi|331048180|gb|EGI20257.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli M718]
 gi|331054063|gb|EGI26092.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA206]
 gi|331058055|gb|EGI30037.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA143]
 gi|331062934|gb|EGI34848.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA271]
 gi|331068163|gb|EGI39559.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli TA280]
 gi|331073338|gb|EGI44661.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H591]
 gi|331078456|gb|EGI49662.1| putative ABC superfamily (membrane) transport protein [Escherichia
           coli H299]
 gi|332086231|gb|EGI91389.1| toluene tolerance protein Ttg2B [Shigella boydii 5216-82]
 gi|332086452|gb|EGI91599.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 155-74]
 gi|332090701|gb|EGI95795.1| toluene tolerance protein Ttg2B [Shigella boydii 3594-74]
 gi|332102327|gb|EGJ05673.1| membrane component of ABC superfamily [Shigella sp. D9]
          Length = 260

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|260435355|ref|ZP_05789325.1| ABC-type transport system, permease component [Synechococcus sp. WH
           8109]
 gi|260413229|gb|EEX06525.1| ABC-type transport system, permease component [Synechococcus sp. WH
           8109]
          Length = 249

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +     L  QM   G   + +V++IS   G+V   Q A +L+
Sbjct: 10  LGTSLLIGGQAVAATLRGRINRGELFEQMLEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+      F A+    +     Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFFVAVWSGQLTSTALYNIPPAVFWTSVQTWMNPLDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  VA   G         +G   T  VV  + +V ++D +     F 
Sbjct: 190 FMLVKALVFGLIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248


>gi|254489694|ref|ZP_05102890.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
 gi|224465103|gb|EEF81356.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
          Length = 260

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G                      +++Q++ VGV  + ++++     G V+  QG   L  
Sbjct: 20  GRAHLFLFNMLLGIPGLFLRFSLVVQQLFSVGVLSILIILISGLFVGMVLGLQGYNTLVD 79

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGAE     L+S+  +RE+G +++A++ AGR+GSA+ AEIG MK  E++  +  M +D +
Sbjct: 80  FGAEESLGVLVSLSLVRELGPVVSALLFAGRAGSALTAEIGLMKSTEQLSGMEMMAVDPI 139

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIF 311
           R +I+PR  A II++PLL  + +   I+G  +V      +    F+S+  +   L  +I 
Sbjct: 140 RRIIAPRFLAGIIAMPLLAAIFSAVGILGGFLVGHGLLGVDDGAFWSQMQAKTDLYDDIL 199

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            G+IK+      +  +A+ EG      S  +G+  T  VV S   ++ +D +     F 
Sbjct: 200 NGVIKSVVFGFVVTWIALFEGHDATPTSEGVGRATTRTVVHSAFAILGLDFVLTALMFG 258


>gi|196231158|ref|ZP_03130018.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
 gi|196224988|gb|EDY19498.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428]
          Length = 264

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 129/255 (50%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +   +    S A +L   +   G+      +          Q    GV  VP+V L+SF
Sbjct: 7   AVRSALQHVSSIAWLLIYTVQEMGDHMLRRRRLPFRPSIFFEQADRTGVGSVPLVALVSF 66

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  +A      L+ +G E      ++I   RE+G L+T +M+A R G+A  AE+G+M 
Sbjct: 67  FLGLTMALLTGHVLAPYGQETLVPAAVAIGFTRELGPLITGIMVAARVGAAFTAELGTMV 126

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE++AI  MGL  +R+L+SPR+ A  + +P L++++N  A+ G +++    +DIP   
Sbjct: 127 VAEEVEAIEAMGLGPLRLLVSPRVLAAFLLMPCLSVVSNMMALSGGALISRWAFDIPMQG 186

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F+        + +I  G++K+      IG++A  +G  V   +  +G   T+ VV +I+ 
Sbjct: 187 FWQSSLENLFIRDIVAGVLKSFLFGLLIGLIACYKGLTVRGGAAGVGTATTSSVVTAITT 246

Query: 357 VIIIDSLFAIFYFAI 371
           VI  D++F I   A+
Sbjct: 247 VIGFDTVFNIVLVAL 261


>gi|304383590|ref|ZP_07366049.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella marshii DSM 16973]
 gi|304335114|gb|EFM01385.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella marshii DSM 16973]
          Length = 261

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG  +   G   A   + + FL   + +M  +GV+ + +V+LISF  GAVI  
Sbjct: 16  IKKYLTTLGAYLILMGRAVAKPERMRMFLKRYVAEMSALGVNSIGIVLLISFFIGAVICI 75

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       F        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 76  QMKLNIQSPWMPRFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 135

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  ++  +P L I+++ + I+GA    +  + +           
Sbjct: 136 LDIMGVNSACYLILPKIIGMVTIMPFLVIISSATGILGAYATSYIGHVLSPEDLTIGLQH 195

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 196 QFNPWFVWMSIIKSLFFAFIISSVSSYFGYTVQGGSVEVGKASTDAVVSSSVLILFSDVF 255

Query: 364 FAIFYF 369
                 
Sbjct: 256 LTHLLS 261


>gi|86147572|ref|ZP_01065882.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
 gi|85834611|gb|EAQ52759.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
          Length = 259

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I      + +     G              K K     L++Q Y VGV  + ++++  
Sbjct: 4   KTIAGVGKRALAICESFGRASLMLFGALFGIPKLK-NFPLLVKQFYSVGVQSLAIILVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L  +GAE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 63  LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D ++ +I+PR+WA +IS+PLL ++     I GA +V   +  I   
Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S+  L  +I   +IK    A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 183 SFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 243 LAVLGLDFVLTALMFG 258


>gi|220933918|ref|YP_002512817.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995228|gb|ACL71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 260

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 1/250 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + K  +        LG           S          +I+++Y VGV  + ++ +   
Sbjct: 4   GLQKLGHWGLGVLERLGRGHLFLLRVLMSLGTAVTRPRLVIKELYSVGVLSLLIIAVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L  FGAE     ++++  +RE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 64  FVGMVLGYQGYITLVNFGAEEALGSVVALSLVRELGPVITALLFAGRAGSALSAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++  +  M +D V+ +I PR  A  ISLPLL  + +  A++G   +      +    
Sbjct: 124 TTEQLSGMEMMAVDPVKRVILPRFVAAFISLPLLAAIFSAVAVMGGYFIGVGLLGVDGGS 183

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++S+  +      ++  G+IK+      +  +A+ EG+     S  + +  T  VV S  
Sbjct: 184 YWSQMQANVDFYEDVMNGIIKSLVFGFVVAWIAVFEGYDTVPTSEGVSRATTRTVVHSAL 243

Query: 356 IVIIIDSLFA 365
            V+ +D +  
Sbjct: 244 AVLALDFILT 253


>gi|320640265|gb|EFX09837.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. G5101]
          Length = 260

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFAAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|254436878|ref|ZP_05050372.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198252324|gb|EDY76638.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 258

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 110/254 (43%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +             +G + + TG+  +   +   +       +  +G   +PVV L +F
Sbjct: 4   ALASLGAAFLGLLAAIGRLATFTGQTISHLVRPPFYGREFATALLQIGYFSLPVVGLTAF 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK
Sbjct: 64  FTGGALALQIYSGGARFSAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+ T+    ++ L  PR+ A  + +P+L  + +   I G  +V  +      A 
Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +           +I + L K         ++    G      +  +G+   + VV +  +
Sbjct: 184 YLQNTVDFLEPRDIISSLAKGAVFGFIAALMGCYHGMNSERGAMGVGRATKSSVVAAAIL 243

Query: 357 VIIIDSLFAIFYFA 370
           ++  + L    +F+
Sbjct: 244 ILAANFLLTEAFFS 257


>gi|167838138|ref|ZP_02464997.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 255

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   V+                   + +Q++++G     
Sbjct: 1   MISAIGRFVIGGLGRTGYATRMFLRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +   ++G  IV    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYIVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        +    T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|168022425|ref|XP_001763740.1| ATP-binding cassette transporter, subfamily I, member 14, ABC
           component protein PpABCI14 [Physcomitrella patens subsp.
           patens]
 gi|162684984|gb|EDQ71382.1| ATP-binding cassette transporter, subfamily I, member 14, ABC
           component protein PpABCI14 [Physcomitrella patens subsp.
           patens]
          Length = 263

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 114/237 (48%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
                 G+    + + +  + + ++Q+  VG   + V +L +   G V   Q   + ++ 
Sbjct: 16  AAFIIAGQVIIRTLRGRIHVRNTLQQLELVGPRSLGVSLLTASFVGMVFTIQFVREFARL 75

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+  ++TA+++AGR GSA  AE+G+M+++E+ D +R +  D V 
Sbjct: 76  GLTRSVGGVLALALARELSPVVTAIIMAGRVGSAFAAELGTMQVSEQTDTLRVLRTDPVD 135

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L++PR+ A  ++LP+LT +    A+  + ++    Y++   +            ++ + 
Sbjct: 136 YLVTPRVIACCLALPILTTMCFAVAMAASVLLADSVYNVSANIILESAARALQPWDLIST 195

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            IK+      I IV+   G      +  +G+  T+ VV S+  + I D + +  +F 
Sbjct: 196 TIKSVVFGGIISIVSCTWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWVFFQ 252


>gi|239814162|ref|YP_002943072.1| hypothetical protein Vapar_1155 [Variovorax paradoxus S110]
 gi|239800739|gb|ACS17806.1| protein of unknown function DUF140 [Variovorax paradoxus S110]
          Length = 260

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 117/253 (46%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  S+   LG              +       +  Q++++G   + ++ +     G
Sbjct: 8   DIGFAVRSKLADLGYGAKLFLRLLVQGAQSLQRFGLVRDQIHFLGNYSLAIIAVSGLFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  Q  + L ++G+      L+++  +RE+G ++ A++  GR+G+++ AEIG MK  E
Sbjct: 68  FVLGLQMYYALQRYGSSEALGLLVALSLVRELGPVVAALLFTGRAGTSLTAEIGLMKAGE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M +D V+ +++PR WA +I++PLL  + +   I+G  +V      +    F+ 
Sbjct: 128 QLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLGVDPGAFWG 187

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +      +  ++  G+IK+      +  +A+ +G+        + +  T  VV +   V+
Sbjct: 188 QMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQGYEAQPTPEGVSRATTRTVVMASLSVL 247

Query: 359 IIDSLFAIFYFAI 371
            +D L     F+I
Sbjct: 248 GLDFLLTAMMFSI 260


>gi|193065385|ref|ZP_03046456.1| toluene ABC transporter, permease protein [Escherichia coli E22]
 gi|192927026|gb|EDV81649.1| toluene ABC transporter, permease protein [Escherichia coli E22]
          Length = 260

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +++  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGVDFVLTALMFG 259


>gi|94312189|ref|YP_585399.1| hypothetical protein Rmet_3258 [Cupriavidus metallidurans CH34]
 gi|93356041|gb|ABF10130.1| toluene transporter subunit: membrane component of ABC superfamily
           [Cupriavidus metallidurans CH34]
          Length = 258

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 123/252 (48%), Gaps = 1/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              +        LG          A S         +  Q+++VG   + ++ +     G
Sbjct: 7   SIGSTVRQFVGGLGHATRMFLTMLALSPALLRRFRLVTDQVFFVGNLSLVIIAVSGLFVG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L++FG+E     L+++  +RE+G ++ A++ AGR+G+++ AEIG MK  E
Sbjct: 67  FVLGLQGYYTLNRFGSEQALGLLVALSLVRELGPVVAALLFAGRAGTSLTAEIGLMKAGE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M ++ ++ +I+PR WA +I++P+L  + +   ++G  +V  +   +    F+S
Sbjct: 127 QLSAMEMMAVNPLQRVIAPRFWAGVIAMPVLATIFSALGVLGGYLVGVQLIGVDAGAFWS 186

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +  +   +  ++  G+IK+      +  +A+ +GF        + +  T  VV +   V+
Sbjct: 187 QMQNGVDVRADVLNGVIKSFIFGITVTFIALYQGFEAKPTPEGVSRATTRTVVLASLAVL 246

Query: 359 IIDSLFAIFYFA 370
            +D L     F+
Sbjct: 247 GLDFLLTALMFS 258


>gi|300728342|ref|ZP_07061707.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299774407|gb|EFI71034.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 252

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
              +LG  I   G+  +   + + +    I++M  +GV  + +V+LISF  GAVI  Q  
Sbjct: 10  YLTVLGTYIQLMGKVFSRPERLRMYSKQYIKEMTQLGVDSIGIVLLISFFIGAVICIQMK 69

Query: 188 FQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +       +        + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  
Sbjct: 70  LNIQSPWMPRWVAGYTTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDI 129

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I AL+  +P L I ++   I+GA    +    +           +  
Sbjct: 130 MGVNSASYLILPKIAALVTIMPFLVIFSSAMGIVGAYGTAYIGQILSPEDLTLGIQHSFN 189

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              I+  +IK+ F A  I  V+   G+ V   S  +GK  TT VV S  +++  D     
Sbjct: 190 QWFIWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKASTTAVVNSSVLILFSDVFLTQ 249

Query: 367 FYF 369
              
Sbjct: 250 MLS 252


>gi|229496605|ref|ZP_04390319.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316502|gb|EEN82421.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 256

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 1/249 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           +    +    +G       +  +   ++  F   L+R++  +G+  + +V++ISF  G V
Sbjct: 7   LGKFTASFRTIGEYTLLMRQVFSRPARWSMFFKQLVREIAKIGLDSILIVMIISFFIGTV 66

Query: 182 IAQQGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q A  +S      F        + L E    +  +++AG+ GS+I +E+G+M++ E+
Sbjct: 67  ITIQLAINISSPMIPRFTIGYSTREIVLLEFSSSIMCLILAGKIGSSIASELGTMRVTEQ 126

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I  L++ +P+L+I++  +AI G  +  W    +    F   
Sbjct: 127 IDALEVMGINSANFLILPKIIGLLLFIPVLSIISMATAIGGGFLATWLTPSLTAEDFEYG 186

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                   N+   +IK+   A  I   +   G+ V   +  +G   T  VV S  ++++ 
Sbjct: 187 MQLYFNPYNVLYSVIKSLVYAFIITSGSSYFGYNVKGGALGVGVASTNAVVTSSVLILLA 246

Query: 361 DSLFAIFYF 369
           D L      
Sbjct: 247 DVLLTNLLL 255


>gi|160882382|ref|ZP_02063385.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483]
 gi|237719054|ref|ZP_04549535.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260172011|ref|ZP_05758423.1| hypothetical protein BacD2_09110 [Bacteroides sp. D2]
 gi|299148138|ref|ZP_07041200.1| putative membrane protein [Bacteroides sp. 3_1_23]
 gi|315920324|ref|ZP_07916564.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156112195|gb|EDO13940.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483]
 gi|229451433|gb|EEO57224.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298512899|gb|EFI36786.1| putative membrane protein [Bacteroides sp. 3_1_23]
 gi|313694199|gb|EFS31034.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 247

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|91786696|ref|YP_547648.1| hypothetical protein Bpro_0794 [Polaromonas sp. JS666]
 gi|91695921|gb|ABE42750.1| protein of unknown function DUF140 [Polaromonas sp. JS666]
          Length = 264

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 126/257 (49%), Gaps = 1/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      + SQ   LG          A +         +  Q++++G   + ++ +  
Sbjct: 8   RMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVRDQIFFLGNYSLAIITVSG 67

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+++ AEIG M
Sbjct: 68  LFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLM 127

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ A+  M +D VR +++PR W  +I++PLL  + +   IIG  +V      +   
Sbjct: 128 KAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAVFSAVGIIGGWVVGVVMIGVDAG 187

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  +   +  ++  G+IK+      +  VA+ +GF        + +  T  VV + 
Sbjct: 188 SFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATTRTVVVAS 247

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ +D L   + F++
Sbjct: 248 LAVLGLDFLLTAWMFSL 264


>gi|311103421|ref|YP_003976274.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8]
 gi|310758110|gb|ADP13559.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8]
          Length = 262

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G  +   ++         G +++ +G   +           + +Q++++G   +
Sbjct: 6   NAIGALGGWVRTRVSGIGYFTRFFGAMLARSGIALSRP-------RLVSQQVHFIGNYSL 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 59  LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   I+G  +V   
Sbjct: 119 TAEIGLMKAGEQLAAMEVMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+  +   +  ++  G+IK+      + +VA+ EG+        + +  T
Sbjct: 179 LIGVDAGAFWSQMQNGVDVWKDVANGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV     V+ +D L     F 
Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261


>gi|294788757|ref|ZP_06753998.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
 gi|294483239|gb|EFG30925.1| putative membrane protein [Simonsiella muelleri ATCC 29453]
          Length = 258

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 131/254 (51%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I    + + +   ILG       +  +   +       +IRQMY+ GV  + ++ +    
Sbjct: 4   IQNIGSKTLTFIQILGANTLFLLKILSLLPQNILRPRLMIRQMYFSGVLSILIIAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QL++F A      +++   LRE+G +L A++ A  SG A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLAKFKAADVLGFMVAAALLRELGPVLAAILFASSSGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA ++S+PLL  + N + I G  +V  ++  +   VF
Sbjct: 124 TEQLEAMNVMAINPVARVVAPRFWAGVVSMPLLASIFNVAGIWGGYLVGVQWLGLDSGVF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++ T + ++  GLIK+     A+ ++A+ +GF     +  + +  T  VV S   
Sbjct: 184 WSHMQNSMTFSYDVLNGLIKSMIFGTAVSLIAVYQGFHCRPTAEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +   F FA
Sbjct: 244 VLALDFILTAFMFA 257


>gi|260596176|ref|YP_003208747.1| hypothetical protein CTU_03840 [Cronobacter turicensis z3032]
 gi|260215353|emb|CBA27350.1| UPF0393 inner membrane protein yrbE [Cronobacter turicensis z3032]
          Length = 262

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +          +   G              +F+     L+RQ+Y+VGV  + ++I+    
Sbjct: 8   LASMGQRGLKFSASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYHVGVLSMIIIIVSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ +GAE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG MK 
Sbjct: 68  IGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +ISPR WA +ISLPLLT++     + G S+V   +  I    F
Sbjct: 128 TEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVNWKGIDAGFF 187

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV +   
Sbjct: 188 WSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLA 247

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 248 VLGLDFVLTALMFG 261


>gi|254495378|ref|ZP_05108302.1| ABC transporter, permease protein [Polaribacter sp. MED152]
 gi|85819732|gb|EAQ40889.1| ABC transporter, permease protein [Polaribacter sp. MED152]
          Length = 234

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 1/233 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAE 196
              +      K + F  +L++++  +G+  + +++ ISF  G VIA Q A  L   F   
Sbjct: 1   MLKQVFKRPQKARVFYDALLKEIEELGLKSLGIILFISFFIGGVIALQTALNLDSAFIPR 60

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
                      + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+
Sbjct: 61  SLIGFAAKRSIILEFAPTFCSIILAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNHLV 120

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            P++ A +   P L  L     + G  +            +     +      I   LIK
Sbjct: 121 LPKVIATVFFYPFLITLGMVLGMFGGWLAGVLSGLFSGVNYIEGLQTDFQPFLIVYALIK 180

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               A  I  V    G+ V   S ++GK  T  VV +  +++I +        
Sbjct: 181 TLVFAFLIATVPSYHGYYVKGGSIAVGKASTQSVVWTTILIVIANYFLTQMLL 233


>gi|320322486|gb|EFW78579.1| putative ABC transport system permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 265

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVVSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ AGR+GSA+ AEIG+MK
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V   +  +    
Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +  T  VV +  
Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 249 AVLGLDFILTALMFG 263


>gi|242241047|ref|YP_002989228.1| hypothetical protein Dd703_3649 [Dickeya dadantii Ech703]
 gi|242133104|gb|ACS87406.1| protein of unknown function DUF140 [Dickeya dadantii Ech703]
          Length = 260

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +        S     G              +       L RQ+Y VGV  + ++I+  
Sbjct: 4   QALASLGRSGISTCASFGRAGLMLFNALVGKPEPAKQWPLLARQLYSVGVQSLLIIIVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  CFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA  IS+PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   ++K+ F A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQGAVEWRHDVMNCVLKSLFFAMTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|159476846|ref|XP_001696522.1| lipid transfer machine permease [Chlamydomonas reinhardtii]
 gi|158282747|gb|EDP08499.1| lipid transfer machine permease [Chlamydomonas reinhardtii]
          Length = 245

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 115/235 (48%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+     +K      +   Q+  VG + + V +L +   G V   Q   + ++ G 
Sbjct: 1   MVLGGQVVLRIFKGNIHWKNTAEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGL 60

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++   RE+  ++TA+++AGR GSA  AE+G+M+++E++D++R +  D V  L
Sbjct: 61  TRSVGGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLYTDPVDYL 120

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           ++PR+ A +I+ P+L +L     +  A  +    Y++P  V         T  ++ T ++
Sbjct: 121 VTPRVLASMIAGPILNVLCFLMGMGAAVFLADIVYNVPANVIVDSARRALTSYDVMTSMV 180

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+      +  ++   GF     +  +G+  T+ VV S+  + I D   ++ +F 
Sbjct: 181 KSWVFGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSLVFFQ 235


>gi|323143323|ref|ZP_08078012.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066]
 gi|322416895|gb|EFY07540.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066]
          Length = 257

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +  +   LG               FK     LI Q+Y+VGV  V ++++    
Sbjct: 5   ISSLGRYAIRKVTSLGRSTIMLYHALVGKPDFKKHFPLLISQIYFVGVQSVIIILVSGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F A      L+++  +RE+G ++TA++ AGR+GSA+ AEIG +K 
Sbjct: 65  IGMVLGLQGFNILKDFMATGSLGTLVALAIIRELGPVVTALLYAGRAGSALTAEIGQLKA 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +E++ ++  M +D +R +ISPR WA  IS+PLL+I+     I G  +V   +  +   ++
Sbjct: 125 SEQLSSMEMMAVDPLRRIISPRFWAGAISMPLLSIMFCLVGIYGGKLVGVDWLGLDDGIY 184

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S+  L  +I   ++K+   A     +A+  G+     S+ +    T  VVQS   
Sbjct: 185 WSGMQSSVDLVEDIGCMVVKSIVFAIVCTWIALFNGYDCTPTSSGISNATTATVVQSSLA 244

Query: 357 VIIIDSLFAIFYF 369
           V+ +D +     F
Sbjct: 245 VLGLDFVLTALMF 257


>gi|212690525|ref|ZP_03298653.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855]
 gi|212666874|gb|EEB27446.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855]
          Length = 248

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 1/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I   G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  Q    + 
Sbjct: 9   VGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 68

Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  MG++
Sbjct: 69  SPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 128

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I AL+  +P L I + FS IIGA    W    +           +     +
Sbjct: 129 SAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 188

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 189 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 248


>gi|281421763|ref|ZP_06252762.1| ABC transporter, permease [Prevotella copri DSM 18205]
 gi|281404258|gb|EFB34938.1| ABC transporter, permease [Prevotella copri DSM 18205]
          Length = 248

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   I++M  +G+  + +V+LISF  GAVI  Q   
Sbjct: 7   LTTFGKYLILMGRSFSRPERMRMFLKQYIKEMSQLGIDSIGIVLLISFFIGAVICIQMKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++   IIGA    +  + +P          +   
Sbjct: 127 GVNSACYLILPKILGLVTIMPFLVIFSSGMGIIGAYGTAYIGHILPPDDLTLGLQHSFNQ 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFVWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKSSTDAVVCSSVLILFSDVFLTQI 246

Query: 368 YF 369
             
Sbjct: 247 LS 248


>gi|300865432|ref|ZP_07110232.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336571|emb|CBN55382.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 274

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 1/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
             I   G+     +       + + QM  VG   + + ++ +   G V   Q A +    
Sbjct: 26  AAILLGGQVTLHLFTRTIHRRNTLDQMVAVGPESLLIALVTAGFVGMVFTIQVAREFIAL 85

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G       ++++   RE+G +LTAV+IAGR GSA  AEIG+M++ E+IDA+  +  D + 
Sbjct: 86  GVTNAVGGVLAVSLARELGPVLTAVIIAGRVGSAFAAEIGTMQVTEQIDALYILKTDPID 145

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + LP+LTIL+  + + G  ++  + Y +P  VF     +  T  +I   
Sbjct: 146 YLVIPRVIACCLMLPILTILSLVTGMAGGLLIATRMYGVPPVVFLESARNFLTPWDICAP 205

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
            IKA      I ++    G      +  +G+  TT VV S+  + I +   + + +   G
Sbjct: 206 AIKAFVFGALIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSMLAIFICNFFLSWLMFQGTG 265


>gi|154494356|ref|ZP_02033676.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC
           43184]
 gi|154085800|gb|EDN84845.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC
           43184]
          Length = 248

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 2/240 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H +G  +   G+  +   ++  F   LI+++Y +GV  + +V++IS   G VIA Q +
Sbjct: 4   ALHQVGEYVMLMGKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVVIISIFIGTVIAIQIS 63

Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +S      F        + L E    + ++++AG+ GS I +EIG+M++ E+IDA+  
Sbjct: 64  LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTA 305
           MG++    LI P++  ++  +P+L I + F+ I+G           +  A F        
Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +  
Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243


>gi|88803715|ref|ZP_01119239.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P]
 gi|88780448|gb|EAR11629.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P]
          Length = 246

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 1/245 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G              KF  F  +L++++  +G+  + +++ ISF  G VIA Q
Sbjct: 1   MTYLEHVGKYFMMLRLVFKRPQKFHIFYTALMKEIEDLGLKSIGIIMFISFFIGGVIALQ 60

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L   F  +           + E       +++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNLDSPFIPDSLIGFAAKRSIILEFAPTFCCIILAGKVGSYITSSIGAMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I A +   P L ILA    I G  +            +     + 
Sbjct: 121 EVMGINALNFLVLPKILAALFFYPFLIILAMVLGIFGGWLAGVASGLFSGVDYIIGIQTE 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                I   +IK    +  I  V    G+ V   S ++G+  T  VV +  +++I + + 
Sbjct: 181 FNSFLIVYAMIKTLVFSFIIATVPAYHGYYVKGGSIAVGRASTQAVVWTTILIVISNYIL 240

Query: 365 AIFYF 369
                
Sbjct: 241 TQLLL 245


>gi|85058184|ref|YP_453886.1| hypothetical protein SG0206 [Sodalis glossinidius str. 'morsitans']
 gi|84778704|dbj|BAE73481.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 260

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I  F     +  H  G                +     L++++Y VGV  + ++++  
Sbjct: 4   EAIASFGRRGINICHGFGRAGVMLFNALIGKPALREQWPLLVKKLYGVGVLSLVIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +IS+PLLT +     I G ++V  ++  I   
Sbjct: 124 KATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFVAVGIWGGAVVGVEWKGIDSG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S          ++   +IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 184 FFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|255034005|ref|YP_003084626.1| hypothetical protein Dfer_0190 [Dyadobacter fermentans DSM 18053]
 gi|254946761|gb|ACT91461.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM
           18053]
          Length = 262

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 111/210 (52%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           +     +++Q Y +G   + ++ L  F+TG V  +Q    LS+FGA  +   L++I  +R
Sbjct: 39  RMEFQEIVKQCYAIGNKSLLLISLTGFITGMVFTKQSRPSLSEFGATSWLPSLVAIAIVR 98

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
            +  L+TA++ AG+ GS+I AE+GSM++ E+IDA+    ++  + L+  R+ A  I++P+
Sbjct: 99  ALAPLVTALISAGKIGSSIGAELGSMRVTEQIDAMEVSAVNPFKFLVVTRVVACTIAIPV 158

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L       +++GA + +       F  FF       T  +I+T + KA      IGIV  
Sbjct: 159 LMFYCALVSLLGAYLNVTLNEGTSFIAFFENAFEQITFLDIWTSVAKAIAYGFTIGIVGS 218

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            +G+     +  +GK   + VV S+ ++ I
Sbjct: 219 YQGYNASKGTEGVGKAANSAVVTSMFLIFI 248


>gi|71909013|ref|YP_286600.1| hypothetical protein Daro_3401 [Dechloromonas aromatica RCB]
 gi|71848634|gb|AAZ48130.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB]
          Length = 263

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +  +++  +   LG            S      L   +R++Y+ GV  + ++++    
Sbjct: 8   VRRLGHETVERIWRLGFAARFFWAVLMHSGSSFRRLPLTLREIYFSGVLSLLIIMVSGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L +FG+      L+++   RE+G +L A+  A R+GS++ AEIG MK 
Sbjct: 68  VGLVLGLQGYEILQRFGSTEALGTLVALSLTRELGPVLAAIFFASRAGSSVTAEIGLMKA 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M ++ +  +++PR W  +IS+PLL  + +   ++G  ++   +  +    +
Sbjct: 128 TEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAAIFSAMGVLGGWLIGVVFIGVDDGAY 187

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  ++     +I+ G++K+     A+ ++A+ EG+     +  + + +T  VV S+  
Sbjct: 188 WSQMQASVDFRYDIWNGVVKSFVFGIAVSLIAVFEGYDSVPTAEGVSRAITRTVVTSVLT 247

Query: 357 VIIIDSLFAIFYF 369
           V+ +D +   F F
Sbjct: 248 VLALDFVLTSFMF 260


>gi|254294304|ref|YP_003060327.1| hypothetical protein Hbal_1946 [Hirschia baltica ATCC 49814]
 gi|254042835|gb|ACT59630.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814]
          Length = 264

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 118/254 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                    A  +G +   T     +      +L  ++RQ   +G   +PVV L +   G
Sbjct: 11  AIGRAVLGTAAEIGRLAIFTARTVWACITPTIYLREVVRQCIQIGFFSLPVVGLTAVFIG 70

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A +A       S+F AE F  +++ +   RE+G     +M+AGR G+ I AEIG+M++ E
Sbjct: 71  AALALNIYMGGSRFNAEQFVPNIVVLGITRELGPAFAGLMLAGRVGAGIAAEIGAMRVTE 130

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+     R L +PR+ A  I+LP L ++A+   ++G  +V     D    ++  
Sbjct: 131 QIDALHTLSAKPERYLFAPRVIAATITLPALVLIADIIGVMGGWLVSVGALDFNSTIYLR 190

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                 T+ ++ +GLIKA      I I+   +G      +  +G+  T  VV    +++ 
Sbjct: 191 NTLDFMTINDVLSGLIKAGVFGAIIAIMGCYQGTNSKGGAGGVGRAATLAVVSGAVLILA 250

Query: 360 IDSLFAIFYFAIGI 373
            + +    +  +G+
Sbjct: 251 SNYILTSIFVQVGL 264


>gi|258647414|ref|ZP_05734883.1| ABC transporter, permease [Prevotella tannerae ATCC 51259]
 gi|260852782|gb|EEX72651.1| ABC transporter, permease [Prevotella tannerae ATCC 51259]
          Length = 248

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +  +  G  I   G       +++ F    +++M  +GV  + +V+LISF  GAVI  
Sbjct: 3   ILNFLNSFGRYIELLGRTFQRPERWRMFGKQYLKEMAQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  ++++G+ GS I +E+G+M+  ++IDA
Sbjct: 63  QIKLNIQSAWMPTWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRTTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +PLL I +  S I+GA    +  + I      +    
Sbjct: 123 LEIMGVNSASFLILPKILGLVTMIPLLVIFSTASGIVGAYATAYIGHIITATDLTAGMQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                  + G IK+ F A  I  V+   G+ V   S  +GK  T  VV    +++  D  
Sbjct: 183 DFAPWFFWMGTIKSLFFAFIIASVSSFYGYTVEGGSIEVGKASTNAVVSCSMLILFSDLF 242

Query: 364 FAIFYF 369
                 
Sbjct: 243 LTNILS 248


>gi|150003041|ref|YP_001297785.1| hypothetical protein BVU_0448 [Bacteroides vulgatus ATCC 8482]
 gi|254883679|ref|ZP_05256389.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294775665|ref|ZP_06741173.1| putative membrane protein [Bacteroides vulgatus PC510]
 gi|149931465|gb|ABR38163.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254836472|gb|EET16781.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294450509|gb|EFG19001.1| putative membrane protein [Bacteroides vulgatus PC510]
          Length = 255

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 1/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I   G   A   +   F    + +M  +GV+ + +V+LISF  GAVI  Q    + 
Sbjct: 16  VGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 75

Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    +  ++++G+ GS I +EIG+M++ ++IDA+  MG++
Sbjct: 76  SPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVN 135

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I AL+  +P L I +  S IIGA    W    +           +     +
Sbjct: 136 SAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 195

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 196 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 255


>gi|325855171|ref|ZP_08171794.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS
           18C-A]
 gi|327312571|ref|YP_004328008.1| hypothetical protein HMPREF9137_0267 [Prevotella denticola F0289]
 gi|325483908|gb|EGC86852.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS
           18C-A]
 gi|326944406|gb|AEA20291.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 248

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    +   + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P++  LI  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQV 246

Query: 368 YF 369
             
Sbjct: 247 LS 248


>gi|254462404|ref|ZP_05075820.1| membrane protein [Rhodobacterales bacterium HTCC2083]
 gi|206678993|gb|EDZ43480.1| membrane protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 261

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 106/239 (44%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +           ++   +L  L   +  VG   +PVV L +  TG  +A Q     ++
Sbjct: 23  GRISIYAFSTLHHIFRRPFYLRELGIAILNVGWLSLPVVGLTAVFTGGALALQIYAGGAR 82

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           F AE     +++I  +RE+G +L  +MIA R  S+I AEI +MK+ E+IDA+ T+    +
Sbjct: 83  FNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPM 142

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L  PR+ A +I +P+L  + +   I+G  +V     +     +           ++F+
Sbjct: 143 QYLTVPRVLAGLICVPVLVGVGDVIGILGGYLVATGTLEFNSTTYLVNTFDFLEPRDVFS 202

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            L K         ++    G   G  +  +G      V  +  +++  + +    +F+I
Sbjct: 203 SLAKGAVFGTIATLMGCYYGMNSGRGAQGVGAATKGSVEAAAILILAANFVLTGVFFSI 261


>gi|83816537|ref|YP_446599.1| hypothetical protein SRU_2501 [Salinibacter ruber DSM 13855]
 gi|294508531|ref|YP_003572590.1| Conserved hypothetical protein, membrane, containing DUF140 domain
           [Salinibacter ruber M8]
 gi|83757931|gb|ABC46044.1| domain of unknown function superfamily [Salinibacter ruber DSM
           13855]
 gi|294344860|emb|CBH25638.1| Conserved hypothetical protein, membrane, containing DUF140 domain
           [Salinibacter ruber M8]
          Length = 250

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 1/238 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            ++   S    LG   +  G   AS  K   +  +L  QM  VG+  +P+V L +  TGA
Sbjct: 1   MLDALLSPFRALGRYATLMGRAFASIDKVGTYWNNLFIQMVRVGIDSIPIVALAAAFTGA 60

Query: 181 VIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           V   Q A+QL   F  +     +++   + E+G ++   ++AGR G+ I AE+G+M+++E
Sbjct: 61  VFTVQTAYQLETPFIPKTIIGSIVAPSIMLELGAVIAGFILAGRVGARIAAELGTMRVSE 120

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  MGL+ V  L+ PR+ A ++  P+L +++    I     V      +  + F  
Sbjct: 121 QIDALEVMGLNSVGFLVLPRVLAGVLMFPVLYVVSCVVGIGTGIGVGHFGGFLSASEFLE 180

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                  L +   GLIK+      I  +A  +G+  G  +  +G   T   V S   +
Sbjct: 181 GARQFFKLLDPTIGLIKSFAFGFIITSIACYKGYYTGGGAVGVGDSTTQAAVLSCVFI 238


>gi|228471177|ref|ZP_04055990.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228306992|gb|EEK16074.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 251

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 115/246 (46%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +   ++G       +      K+  F   LIR++   G+  + +V++ISF  G VI  
Sbjct: 5   ISNALSVMGEYTLLMAQVFRRPKKWGIFFKQLIREIAKYGLDSIWIVVIISFFIGTVITI 64

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q +  ++      F        +   E    +  +++AG+ GS+I +E+ +M++ E+IDA
Sbjct: 65  QLSINMNSPLIPHFTIGYASREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L++ +P+L++++  + ++G  +  +    I  + F     +
Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMSTGLVGGYLATYFIPTITPSDFEMGLQT 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                NIF  +IK+   A  I   A   G+ V   +  +G+  T  VV S  ++++ D +
Sbjct: 185 FFVTRNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVV 244

Query: 364 FAIFYF 369
                F
Sbjct: 245 LTSLLF 250


>gi|260590590|ref|ZP_05856048.1| ABC transporter, permease [Prevotella veroralis F0319]
 gi|260537463|gb|EEX20080.1| ABC transporter, permease [Prevotella veroralis F0319]
          Length = 248

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G  +   G   +   + + F    +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LNTFGNYLMLMGRSLSRPERMRMFFKRYLKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    +   + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSAWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKILGLMTIMPFLVIFSAATGIIGAYATAYFAHIITPVDLTAGLQHDFNP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246

Query: 368 YF 369
             
Sbjct: 247 LS 248


>gi|145640771|ref|ZP_01796354.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae
           R3021]
 gi|319776661|ref|YP_004139149.1| ABC transporter permease [Haemophilus influenzae F3047]
 gi|329124179|ref|ZP_08252726.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
 gi|145274697|gb|EDK14560.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae
           22.4-21]
 gi|317451252|emb|CBY87486.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae F3047]
 gi|327467604|gb|EGF13102.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus aegyptius
           ATCC 11116]
          Length = 261

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             LG              + +     L++QM+ +GV  + +++L    
Sbjct: 6   ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVGVDWKGVDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++ + + +I  G IKA F A A+  +A+  G+     S  + +  T  VV +  +
Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFAIG 372
           V+ +D +     F  G
Sbjct: 246 VLGLDFILTAIMFGAG 261


>gi|237809666|ref|YP_002894106.1| hypothetical protein Tola_2931 [Tolumonas auensis DSM 9187]
 gi|237501927|gb|ACQ94520.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187]
          Length = 259

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +            G       +      + +     LI+Q+Y VGV  V ++++    
Sbjct: 6   ISRLGRRGIQSLTATGRAGIMLYQALVGRPEPRKHFPLLIQQLYVVGVESVLIILVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  FGAE     L+++  LRE+G +++A++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGFQGYRVLVDFGAEASLGPLVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R ++SPR WA  ISLPLL+++  F  IIG  +V   +       F
Sbjct: 126 TEQLSSLEMMAVDPLRRIVSPRFWAGAISLPLLSLIFCFIGIIGGKLVGVDWLGADEGGF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++     +I  G+IK+   A  +  VA+  G+     +  + +  T  VV +  +
Sbjct: 186 WSAMQASVDWQEDIVQGIIKSVAFALVVTWVALFNGYDSLPTAAGISQATTRTVVHASLL 245

Query: 357 VIIIDSLFAIFYF 369
           V+ +D +     F
Sbjct: 246 VLGLDFVMTAVMF 258


>gi|319897434|ref|YP_004135631.1| abc-type transport system protein, permease component [Haemophilus
           influenzae F3031]
 gi|317432940|emb|CBY81307.1| conserved ABC-type transport system protein,permease component
           [Haemophilus influenzae F3031]
          Length = 261

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG              + +     L++QM+ +GV  + +++L    
Sbjct: 6   ISALGKQAIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVGVDWKGVDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++ + + +I  G IKA F A A+  +A+  G+     S  + +  T  VV +  +
Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFAIG 372
           V+ +D +     F  G
Sbjct: 246 VLGLDFILTAIMFGAG 261


>gi|304413072|ref|ZP_07394545.1| permease component of phospholipid ABC transporter [Candidatus
           Regiella insecticola LSR1]
 gi|304283915|gb|EFL92308.1| permease component of phospholipid ABC transporter [Candidatus
           Regiella insecticola LSR1]
          Length = 260

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K +      +       G              + +     L++Q++ +G   + ++++  
Sbjct: 4   KALASLGGKAIDVCTSFGRAGWMLFHALVGKPEPRKQWPLLVKQLHNLGTQSLSIIVVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  LFIGMVLGLQGYLILMTYSAEASLGMMVALSLLRELGPVITALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +I+PR WA +IS+PLL  +     I+G +IV   +  I   
Sbjct: 124 KATEQLASLEMMAIDPLRRVIAPRFWAGVISMPLLMAIFIAVGIVGGAIVGVDWKGIDAG 183

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   LIK+     A+  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAIEWRVDLINSLIKSLVFTVAVTWIALFNGYDALPTSEGISQATTRTVVYSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTTLMFG 259


>gi|241762837|ref|ZP_04760900.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241368012|gb|EER62217.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 260

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G  + + + D    A + G ++             +        Q++++G   + ++ 
Sbjct: 8   DVGLAVRRQLADVGQAARLFGQLVRLFPAAVQRPGLVR-------DQVHFLGNYSLAIIA 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+A QG + L  FG+      L+++  LRE+G ++TA++ AGR+G+++ AEI
Sbjct: 61  VSGLFVGFVMALQGYYTLQDFGSTEALGQLVALSLLRELGPVITALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G M+  E++ A+  M +D VR ++ PR WA +I++P+L  + +   ++G  +V      +
Sbjct: 121 GLMRAGEQLSAMEMMAVDPVRRILVPRFWAGVIAMPVLATVFSAVGVMGGWVVAVVMIGL 180

Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+        +++   LIK+      +  VA+ +G+        + +  T  VV
Sbjct: 181 DGGAFWSQMQGGVDVFSDLGNSLIKSLVFGFTVTFVALLQGYTAKPTPEGVSRATTRTVV 240

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            +   V+ +D +     F+I
Sbjct: 241 MASLAVLALDFVLTATMFSI 260


>gi|145630177|ref|ZP_01785959.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae
           R3021]
 gi|260581861|ref|ZP_05849657.1| ABC transporter permease [Haemophilus influenzae NT127]
 gi|144984458|gb|EDJ91881.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae
           R3021]
 gi|260095054|gb|EEW78946.1| ABC transporter permease [Haemophilus influenzae NT127]
          Length = 261

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                      LG              + +     L++QM+ +GV  + +++L     G 
Sbjct: 9   LGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGM 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 69  VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V   +  +    F+S 
Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVGVDWKGVDSGSFWSV 188

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++ + + +I  G IKA F A A+  +A+  G+     S  + +  T  VV +  +V+ 
Sbjct: 189 MQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLVVLG 248

Query: 360 IDSLFAIFYFAIG 372
           +D +     F  G
Sbjct: 249 LDFILTAIMFGAG 261


>gi|330432403|gb|AEC17462.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
          Length = 261

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I +           LG              +F+     +++Q+Y +GV  + +++L    
Sbjct: 6   IERLGKRGVHWLCTLGKSALMLYGALVGVPQFRKNFPLVVKQLYVLGVQSLLIIVLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVILVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++  +  M ++ +R +I+PR WA +I++PLL ++     I G S+V   +  +    F
Sbjct: 126 TEQLSGLEMMAVNPLRRVIAPRFWAGMIAMPLLALIFTAVGIWGGSLVGVDWKGVDGGSF 185

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S+     +I  G+IK+   A ++  +A+  G+     S  + +  T  VVQ+  +
Sbjct: 186 WSVMQSSVVWGKDIGNGIIKSLCFALSVVWIALFNGYNALPTSEGISQATTKTVVQASLV 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLALDFILTALMFG 259


>gi|113869373|ref|YP_727862.1| ABC-type transporter, permease component involved in toluene
           tolerance [Ralstonia eutropha H16]
 gi|113528149|emb|CAJ94494.1| ABC-type transporter, permease component involved in toluene
           tolerance [Ralstonia eutropha H16]
          Length = 259

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 123/253 (48%), Gaps = 1/253 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +            LG            S         +  Q+++VG   + ++ +     
Sbjct: 6   ITIGAAVRRSVSGLGRATRMFLTLLGLSPALLRRFRLVTDQVFFVGNLSLVIIAVSGLFV 65

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  
Sbjct: 66  GFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAG 125

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E++ A+  M ++ ++ +I+PR WA +I++P+L  + +   I+G  +V  +   +    F+
Sbjct: 126 EQLTAMEMMAVNPLQRVIAPRFWAGVIAMPVLAAIFSAVGILGGYVVGVQLIGVDAGAFW 185

Query: 299 SRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
           S+      +  ++  G+IK+     A+  +A+ +GF        + +  T  VV +   V
Sbjct: 186 SQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRATTRTVVIASLAV 245

Query: 358 IIIDSLFAIFYFA 370
           + +D L     F+
Sbjct: 246 LGLDFLLTALMFS 258


>gi|83748206|ref|ZP_00945233.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551]
 gi|207721840|ref|YP_002252278.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|207744518|ref|YP_002260910.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|300702838|ref|YP_003744439.1| hypothetical protein RCFBP_10489 [Ralstonia solanacearum CFBP2957]
 gi|83725174|gb|EAP72325.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551]
 gi|206587007|emb|CAQ17591.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum MolK2]
 gi|206595924|emb|CAQ62851.1| abc-type transport system involved in resistance to organic
           solvents, permease component protein [Ralstonia
           solanacearum IPO1609]
 gi|299070500|emb|CBJ41795.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum CFBP2957]
          Length = 255

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG           +          LI Q+ ++G     ++ +     G V+  
Sbjct: 9   VRVLISRLGYAARMLMALLGAWRDVLRRPRLLIEQLRFIGNDSFIIIAVSGLFVGFVLGL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+
Sbjct: 69  QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +  +++PR W   I++PLL  + +   I+G   V      +    F+S+  + 
Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGLIGVDPGAFWSQMQAG 188

Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + ++  G+IK+     A+  VA+ +G+        + +  T  VV +   V+ +D +
Sbjct: 189 VDVVDDVINGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASLAVLALDFV 248

Query: 364 FAIFYFA 370
                F+
Sbjct: 249 LTALMFS 255


>gi|261415260|ref|YP_003248943.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371716|gb|ACX74461.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327576|gb|ADL26777.1| putative membrane protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 261

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 7/259 (2%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             +G+ + +F+N        +  +  N              L + + QM++VG++ +PVV
Sbjct: 10  EGLGRAVRRFLNKVVGYVLFIWELFKNIPGAFT-------NLHTTVEQMHHVGITSIPVV 62

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
              S  TGA+++ Q A+Q       +F    +    + E+  +LTA+++AGR G+++ +E
Sbjct: 63  FAASLATGAIMSWQLAYQFGDMIPMMFVGMAVGKSVMVELCPILTAMVLAGRIGASMCSE 122

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M + E++DA + +GL+  + L++PR+ A +I LP+LTIL+ F  I+G   V   Y +
Sbjct: 123 LGTMAVTEQLDAYKVLGLNPYKYLLAPRLIATVIMLPVLTILSIFIGIVGGYEVAHLYKE 182

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           + ++VFF          ++  GLIKA      I   A   GF     +  +GK     VV
Sbjct: 183 VSWSVFFYGVRMFYQNWDLVVGLIKATLYGFFISSYACFFGFFTHSGAEGVGKSTKATVV 242

Query: 352 QSISIVIIIDSLFAIFYFA 370
             ++ ++I     +     
Sbjct: 243 AGMTSILIGGFTLSKLLLV 261


>gi|159044922|ref|YP_001533716.1| hypothetical protein Dshi_2379 [Dinoroseobacter shibae DFL 12]
 gi|157912682|gb|ABV94115.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 258

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 110/255 (43%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + I              G      G   +   +   +     + +  +G   +PVV L +
Sbjct: 3   RLIAAIGASVLGILGAAGRFAIFVGAAFSHMVRPPFYWREFGQALLNIGYFSLPVVGLTA 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F TG  +A Q     ++F AE     +++I  +RE+G +L  +MIA R  S+I AEI +M
Sbjct: 63  FFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAARVTSSIAAEIATM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K+ E+IDA+ T+    ++ L +PR+ A I+ +PLL  + +   I+G  +V         A
Sbjct: 123 KVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGYLVSTSRLGFNPA 182

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +         L +I + L K         ++    G   G  +  +G    + VV +  
Sbjct: 183 TYLQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGVGAATKSSVVAAAV 242

Query: 356 IVIIIDSLFAIFYFA 370
           +++  + +    +F+
Sbjct: 243 LILAANYMLTELFFS 257


>gi|283788167|ref|YP_003368032.1| putative organic solvent tolerance protein [Citrobacter rodentium
           ICC168]
 gi|282951621|emb|CBG91321.1| putative organic solvent tolerance protein [Citrobacter rodentium
           ICC168]
          Length = 260

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALATLGHKGIKTVSTFGRAGLMLFNALVGKPEFRKHTPLLVRQLYNVGVLSMLIILVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|253995674|ref|YP_003047738.1| hypothetical protein Mmol_0301 [Methylotenera mobilis JLW8]
 gi|253982353|gb|ACT47211.1| protein of unknown function DUF140 [Methylotenera mobilis JLW8]
          Length = 267

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 130/257 (50%), Gaps = 1/257 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +    N   ++   LG          A S +        +R++Y+ GV  + ++I+ +
Sbjct: 11  RFLSGVGNRMIARIWRLGAGARLFMLAIAYSGESFRRFHLTLREVYFTGVMSLLIIIVSA 70

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F  G V+A QG   L ++G+      L+++  +RE+G ++TA++ AGR+G+AI AEIG M
Sbjct: 71  FFVGMVLALQGYNTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGTAITAEIGLM 130

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ A+  M ++ +  +++PR WA +IS+P+L  L +   ++G  +V      +   
Sbjct: 131 KTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILAALFSMVGVLGGYLVAVPLIGVDDG 190

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  +   +  +I  G+IK+     A  ++A+ EGF     +  +    T  VV S 
Sbjct: 191 AFWSQMQANVDVRADIINGVIKSVVFGVACTMIALFEGFDAPPTAEGVSHATTRTVVISS 250

Query: 355 SIVIIIDSLFAIFYFAI 371
             V+ +D +   F   +
Sbjct: 251 LTVLFLDFVLTSFMLVV 267


>gi|332177068|gb|AEE12758.1| protein of unknown function DUF140 [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 251

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +   ++G       +      K+  F   LIR+M   G+  + +V++ISF  G VI  
Sbjct: 5   IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q +  +S      F        +   E    +  +++AG+ GS+I +E+ +M++ E+IDA
Sbjct: 65  QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L++ +P+L++++  + ++G  +  +    I  + F     +
Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + NIF  +IK+   A  I   A   G+ V   +  +G+  T  VV S  ++++ D +
Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVV 244

Query: 364 FAIFYF 369
                F
Sbjct: 245 LTSLLF 250


>gi|319642184|ref|ZP_07996844.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A]
 gi|317386170|gb|EFV67089.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A]
          Length = 251

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 1/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G  I   G   A   +   F    + +M  +GV+ + +V+LISF  GAVI  Q    + 
Sbjct: 12  VGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 71

Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    +  ++++G+ GS I +EIG+M++ ++IDA+  MG++
Sbjct: 72  SPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVN 131

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I AL+  +P L I +  S IIGA    W    +           +     +
Sbjct: 132 SAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 191

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 192 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 251


>gi|251793143|ref|YP_003007871.1| ABC transporter permease [Aggregatibacter aphrophilus NJ8700]
 gi|247534538|gb|ACS97784.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter aphrophilus NJ8700]
          Length = 261

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             N    +G+  + F          LG              +        I+Q++ +GV 
Sbjct: 2   LVNFISALGRNTINFGRA-------LGRAGFLLFGALVGKPQVSKHFPLFIKQLHVLGVQ 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +++L     G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GS
Sbjct: 55  SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++ ++  M +D +R +I+PR WA II++P+L+I+     I G S+V 
Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
             +  +    F+S   ++ T   +I  G IK+ F A A+  +A+  G+     S  + K 
Sbjct: 175 VDWKGVDAGSFWSVMQNSVTWGHDILNGSIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 235 TTRTVVHASLVVLGLDFVLTAIMFG 259


>gi|188997595|ref|YP_001931846.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932662|gb|ACD67292.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 247

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 1/241 (0%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S     G +         S  KF   +  +++ M  +GV+  P+++L  F TG V+  + 
Sbjct: 6   SLIEHTGNITIFFLRTLLSFKKFP-KIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVET 64

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                +F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+IDA+  
Sbjct: 65  YPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEV 124

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           M +D +R L++PRI   I+ +P LT+L+  S +IG        Y I   +++ +      
Sbjct: 125 MAVDPMRYLVAPRIITAILMVPFLTVLSYTSGVIGGYFTSVYVYGINEYMYWEKLKDFTE 184

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +I  GL K+      +  +    G+     +  +G+  TT VV +  +++I+D     
Sbjct: 185 LKDIMGGLYKSAVFGVILVTITAYFGYITKGGAEGVGRSTTTAVVVASVVILILDYFLTA 244

Query: 367 F 367
            
Sbjct: 245 L 245


>gi|218550477|ref|YP_002384268.1| toluene ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218358018|emb|CAQ90664.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|324115202|gb|EGC09166.1| inner membrane protein yrbE [Escherichia fergusonii B253]
 gi|325498775|gb|EGC96634.1| toluene transporter subunit: membrane component of ABC superfamily
           [Escherichia fergusonii ECD227]
          Length = 260

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +  F     +     G              +F+     LIRQ+Y VGV  + ++I+   
Sbjct: 5   ALAAFGRKGITTLRTFGRAGLMLFNAIVGKPEFRKHTPLLIRQIYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|281425287|ref|ZP_06256200.1| hypothetical protein HMPREF0971_02259 [Prevotella oris F0302]
 gi|299141487|ref|ZP_07034623.1| ABC transporter, permease [Prevotella oris C735]
 gi|281400580|gb|EFB31411.1| ABC transporter, permease [Prevotella oris F0302]
 gi|298576823|gb|EFI48693.1| ABC transporter, permease [Prevotella oris C735]
          Length = 252

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 1/249 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                      G  +   G   A   + + F    +++M  +GV  + +V+LISF  GAV
Sbjct: 4   FKLFYKYLTTFGSYLLLMGRSIAVPERMRMFFKRYVKEMSQLGVDSIGIVLLISFFIGAV 63

Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++
Sbjct: 64  ICIQMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 123

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I  L+  +P L + ++   I+GA    +  + +        
Sbjct: 124 IDALDIMGVNSANYLILPKILGLVTMMPFLVVFSSALGILGAYSTAYIGHMLSPDDLTLG 183

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
              +     I+  +IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  
Sbjct: 184 IQHSFNAWFIWMSIIKSMFFAFVIASVSSFFGYTVEGGSVEVGKASTDAVVSSSVLILFS 243

Query: 361 DSLFAIFYF 369
           D        
Sbjct: 244 DVFLTQLLS 252


>gi|288803886|ref|ZP_06409311.1| ABC transporter, permease [Prevotella melaninogenica D18]
 gi|302345895|ref|YP_003814248.1| hypothetical protein HMPREF0659_A6184 [Prevotella melaninogenica
           ATCC 25845]
 gi|288333651|gb|EFC72101.1| ABC transporter, permease [Prevotella melaninogenica D18]
 gi|302149082|gb|ADK95344.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 248

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LTTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    +   + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  LI  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKIMGLITIMPFLVIFSAATGIIGAYATAYLAHIITPVDLTAGLQHDFNP 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246

Query: 368 YF 369
             
Sbjct: 247 LS 248


>gi|295097681|emb|CBK86771.1| conserved hypothetical integral membrane protein [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAGLGHRGLKTISTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G ++V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGALVGVNWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|302877779|ref|YP_003846343.1| hypothetical protein Galf_0536 [Gallionella capsiferriformans ES-2]
 gi|302580568|gb|ADL54579.1| protein of unknown function DUF140 [Gallionella capsiferriformans
           ES-2]
          Length = 262

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 8/265 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +       IG +IV  +      A    L +  +G      +        +I++++  GV
Sbjct: 2   AVVKTISAIGHRIVDTVWRIGVAARFFFLTLLYSGNCLRRFH-------LVIKELFSTGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++I+     G V+  QG   L ++G+E     ++++  +RE+G ++ A++ A R+G
Sbjct: 55  MSLIIIIVAGLFVGMVLGLQGYETLKRYGSESALGVMVALGLVRELGPVMAALLFASRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I A+  M ++ +  +++PR WA +IS+PLL  L +   I G  +V
Sbjct: 115 SAMTAEIGLMKATEQISAMEMMAVNPIARIVAPRFWAGVISMPLLAALFSAVGIFGGYLV 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+S+  +      +I  G+IK+      + ++A+ EGF     +  +  
Sbjct: 175 GVVQIGVDEGSFWSQMQAAVDFREDIMNGIIKSVVFGTVVTVIALFEGFDAPPTAEGVSG 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369
             T  VV S   ++++D +     F
Sbjct: 235 ATTRTVVTSSLAILMLDFVLTAIMF 259


>gi|30250308|ref|NP_842378.1| hypothetical protein NE2383 [Nitrosomonas europaea ATCC 19718]
 gi|30181103|emb|CAD86295.1| Domain of unknown function DUF140 [Nitrosomonas europaea ATCC
           19718]
          Length = 271

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
                + +   IG ++   I         + LV+  +       +        + R++Y+
Sbjct: 7   LAKRIRTIIESIGHRVADSIWRLGCATRFVLLVLLKSLPSFLRFH-------LITREIYF 59

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            GV  + ++++     G V+  QG   L +FG+E     L+++  +RE+G ++ A++ A 
Sbjct: 60  AGVLSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFAS 119

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R+GSA+ AEIG MK  E++ A+  M +D +  +++PR W  + S+PLL  + +   + G 
Sbjct: 120 RAGSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGG 179

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
            +V   +  +    F+S+  ++     +I  G+IK+ F    +  +A+ EGF     +  
Sbjct: 180 YLVTVVFIGVDEGSFWSQMQNSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEG 239

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +    T  VV S   ++ +D +   F F
Sbjct: 240 VSGATTRTVVTSSLAILGLDFVLTAFMF 267


>gi|16273014|ref|NP_439243.1| ABC transporter permease [Haemophilus influenzae Rd KW20]
 gi|260580171|ref|ZP_05848001.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1176838|sp|P45030|Y1086_HAEIN RecName: Full=Probable ABC transporter permease protein HI_1086
 gi|1574640|gb|AAC22742.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260093455|gb|EEW77388.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 261

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             LG              + +     L++QM+ +GV  + +++L    
Sbjct: 6   ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLIDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVGVDWKGVDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++ + + +I  G IKA F A A+  +A+  G+     S  + +  T  VV +  +
Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFAIG 372
           V+ +D +     F  G
Sbjct: 246 VLGLDFILTAIMFGAG 261


>gi|226305212|ref|YP_002765170.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229490705|ref|ZP_04384543.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226184327|dbj|BAH32431.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229322525|gb|EEN88308.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 264

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 117/252 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             ++         G ++    +   ++++        I Q +++    +    L++   G
Sbjct: 7   SVLSPVNGALTQAGNIVELFVDVVRNTFRRPFQFREFIEQAWFIASVTILPTALVAIPFG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV++ Q    + Q GAE F+     +  +++   L+TA+++AG +GSA+ A++GS  I E
Sbjct: 67  AVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGSRTIRE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+  +G++ ++ L+ PR+ A+++   LL  L +   I G               + S
Sbjct: 127 EIDAMEVLGINPIQRLVVPRVLAMVLIAVLLNGLVSVVGIAGGYFFNVILQGGNPGAYIS 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F + A L +I++G IKA       G+++  +G         +G+ V   VV +  ++  
Sbjct: 187 SFSAFAQLPDIWSGEIKAAVFGVIAGVISAYKGLHPSGGPKGVGEAVNQAVVITFLLLFF 246

Query: 360 IDSLFAIFYFAI 371
            + +  + Y  I
Sbjct: 247 ANLILTMVYLQI 258


>gi|325266930|ref|ZP_08133601.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
 gi|324981671|gb|EGC17312.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Kingella denitrificans
           ATCC 33394]
          Length = 257

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +    LG  +           +    +   +RQMY+ GV  V ++ +    
Sbjct: 4   IQNIGAKTIAFIQALGATVLFLLNILMLLPQSLFRMRLTVRQMYFSGVMSVLIIAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G VI  QG  QL++F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA ++S+PLL  + N + I G  +V  ++  +   VF
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVLSMPLLACIFNVAGIYGGYLVGVQWLGLDSGVF 183

Query: 298 FSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +    + ++  GL+K+     A+ ++A+ +GF     +  + +  T  VV S   
Sbjct: 184 WSNMQNNIDVVYDVGNGLLKSLIFGTAVSLIAVYQGFHCTPTAEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           V+ +D +   F F
Sbjct: 244 VLALDFILTAFMF 256


>gi|206890031|ref|YP_002249467.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741969|gb|ACI21026.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 258

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 1/237 (0%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
                     ++   +   ++ QM Y G S V +V L+    G  ++ Q + +LS  G +
Sbjct: 19  ILCVNSIIRLFRKPLYFDDIVEQMEYAGSSSVFIVSLVCLFVGMALSLQLSAELSGLGLK 78

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
           +++  ++ I  +REIG L+TA++  GR G+   AEIGSM +  +ID +R  G+D ++ ++
Sbjct: 79  MYTGKIVGIAVIREIGPLVTALVFIGRVGAGQTAEIGSMILGHQIDTLRVYGIDPIKKVV 138

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            PR+ A ++ LP LTI+ +   + G   +     +   + ++S      T  N+ +G IK
Sbjct: 139 VPRVVASVVMLPCLTIIGDLVCLFGGYYIAVFVSNQSGSFYWSSIIKELTFQNVLSGSIK 198

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
                  I  ++   G      +  L    T  VV SI +VI +D +   I  +A+G
Sbjct: 199 PFIFGYLISCISCFYGLTTRGGAKGLRTSTTKAVVTSIVVVIAMDFVLTRILLYALG 255


>gi|299137710|ref|ZP_07030891.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
 gi|298600351|gb|EFI56508.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8]
          Length = 256

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 107/237 (45%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G +   +      S +         RQ+   G   + ++++  F  GAV+     
Sbjct: 7   LFEFVGKLGLFSLRVVGDSLRPPFEFAQFFRQVAEAGNKSLILIVVSGFALGAVMTLHTR 66

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L  FGA      + ++    EIG L+  +++AGR GS I A + +M+  E+IDAI ++
Sbjct: 67  STLVMFGATAMIPAVQAVAFFVEIGPLVAGLLLAGRVGSGIGAVLANMRATEQIDAIESL 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
            +D  + L+ PR+ A ++ LP+LT+  +F+ ++G  +       I   ++ +R       
Sbjct: 127 SIDSFKFLVVPRVLACVVVLPILTLFMDFAGLLGGFLSEGLTSHIGPTLYVNRAFDYIQW 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           +N     +K       IG V+   G+     +  +G+  T  VV S  ++I+ D L 
Sbjct: 187 SNFIAPTLKTTVFGFIIGSVSSYFGYTTDKGAKGVGEAATNSVVLSSLLIIVADVLL 243


>gi|330721190|gb|EGG99301.1| Uncharacterized ABC transporter2C permease component YrbE [gamma
           proteobacterium IMCC2047]
          Length = 225

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 125/223 (56%), Gaps = 1/223 (0%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +  L  L++Q+Y VGV  +P++I+     G V++ QG   L  +G+E     ++S+  +
Sbjct: 1   MRKGLPLLLKQLYAVGVLSLPIIIVSGLFIGMVMSLQGYSILVDYGSEQAVGQMVSLSLV 60

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           RE+G ++TA++ AGR+GS++ AEIG MK  E+I ++  +G+D +R +++PR+ A  I+LP
Sbjct: 61  RELGPVVTALLFAGRAGSSLTAEIGLMKATEQITSLEMLGVDPLRYVMAPRLLAGFIALP 120

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIV 327
           LLT++ N   I G ++V   +  +    F++   +      ++  G++K+   A  +  +
Sbjct: 121 LLTLIFNVVGIWGGALVAVDWLGVYDGSFWANMQAATDFRTDVVNGMVKSIAFAFVVTWI 180

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           A+ +G  +   S  +G+  T  VV S   V+ +D +     F 
Sbjct: 181 AVFQGHDLTPTSEGIGRATTKTVVYSSLAVLGLDFVLTAVMFG 223


>gi|251791365|ref|YP_003006086.1| hypothetical protein Dd1591_3807 [Dickeya zeae Ech1591]
 gi|247539986|gb|ACT08607.1| protein of unknown function DUF140 [Dickeya zeae Ech1591]
          Length = 260

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +              G              +       L +Q+Y VGV  + ++++  
Sbjct: 4   QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 64  VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  M +D +R +++PR WA +I++PLLT++     I G ++V   +  I   
Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVITMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   +      ++   ++K+   A  +  +A+  G+     S  + +  T  VV S 
Sbjct: 184 FFWSAMQNAVAWQKDLLNCVLKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 244 LAVLGLDFVLTALMFG 259


>gi|193213347|ref|YP_001999300.1| hypothetical protein Cpar_1708 [Chlorobaculum parvum NCIB 8327]
 gi|193086824|gb|ACF12100.1| protein of unknown function DUF140 [Chlorobaculum parvum NCIB 8327]
          Length = 265

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 121/258 (46%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG  +   +         +           ++  K K +   ++ Q    GV  +P
Sbjct: 2   PLTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESIP 61

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V++ S   GA+++ +    L +FGA+       S   LRE+G LL  +M++ R GS   
Sbjct: 62  IVLVSSISIGALMSMEVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRNG 121

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M+I+E+IDA+R  G D +  L+ PR+ A +I    L  L++F+ +  A++V   Y
Sbjct: 122 AELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTAALVAQFY 181

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + +   +F++  +      +     +KAP  A  I +V+   GF+    +  +G+     
Sbjct: 182 HKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIKG 241

Query: 350 VVQSISIVIIIDSLFAIF 367
           +V S  +V++ +   +  
Sbjct: 242 IVASSGLVLVANFYVSKI 259


>gi|255067843|ref|ZP_05319698.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca
           ATCC 29256]
 gi|255047934|gb|EET43398.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca
           ATCC 29256]
          Length = 258

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVTWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ ID +     F
Sbjct: 244 ILAIDFVLTALMF 256


>gi|261364829|ref|ZP_05977712.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           mucosa ATCC 25996]
 gi|288566867|gb|EFC88427.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           mucosa ATCC 25996]
          Length = 258

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVTWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ ID +     F
Sbjct: 244 ILAIDFVLTALMF 256


>gi|114330858|ref|YP_747080.1| hypothetical protein Neut_0852 [Nitrosomonas eutropha C91]
 gi|114307872|gb|ABI59115.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91]
          Length = 265

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I    +        LG            S         + R++YY GV  + ++++    
Sbjct: 9   IESIGHRMVDSIWRLGCATHFMLLVLLKSVPGFLRFRLITREIYYAGVMSLIIILVSGLF 68

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L +FG+E     L+++  +RE+G ++ A++ A R+GSA+ AEIG MK 
Sbjct: 69  VGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFASRAGSAMTAEIGLMKA 128

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M +D +  +++PR W  + S+PLL  + +   + G  +V   +  +    F
Sbjct: 129 TEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGGYLVTVIFIGVDEGSF 188

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  S+     +I  G+IK+ F    +  +A+ EGF     +  +    T  VV S   
Sbjct: 189 WSQMQSSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEGVSGATTRTVVTSALA 248

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   F F
Sbjct: 249 ILGLDFVLTAFMF 261


>gi|296104907|ref|YP_003615053.1| putative ABC transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295059366|gb|ADF64104.1| putative ABC transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 260

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|293391911|ref|ZP_06636245.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952445|gb|EFE02564.1| conserved ABC-type transport system protein, permease component
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 261

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I     ++ + A  +G              +       LI+Q++ +GV  + +++L    
Sbjct: 6   ISALGRNAINFARAMGRAGFLLFGALIGKPQINKHFPLLIKQLHVLGVQSLLIIMLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+ R WA +I++P+L+I+     I G S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIASRFWAGVIAMPILSIIFIAIGIWGGSLVGVDWKGVDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   S+ T + +I  G IK+ F A A+  +A+  G+     S  + K  T  VV +  +
Sbjct: 186 WSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTTIMFG 259


>gi|261342639|ref|ZP_05970497.1| toluene tolerance ABC efflux transporter, permease [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315287|gb|EFC54225.1| toluene tolerance ABC efflux transporter, permease [Enterobacter
           cancerogenus ATCC 35316]
          Length = 260

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMVIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTIL     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S       L  ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAIDLRMDLINCLIKSLVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|255534289|ref|YP_003094660.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Flavobacteriaceae
           bacterium 3519-10]
 gi|255340485|gb|ACU06598.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Flavobacteriaceae
           bacterium 3519-10]
          Length = 250

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 3/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G       +      K   F    +R+++ +GV+   +V+  S   GAV+A 
Sbjct: 2   FKNLLSQIGAYFLLLSKTMKRPQKSSVFGKLFMREIHDLGVNSFGLVLFTSTFVGAVVAI 61

Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           Q     S         F      ++ + E    + +V++AG+ GS I + IG+M++ E+I
Sbjct: 62  QMFNNFSASSFPIPNSFIGYATKVVLILEFAPTIISVILAGKVGSYIASSIGTMRVTEQI 121

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++    LI P+I A II  PLL  ++    I G  +          A + +  
Sbjct: 122 DALDIMGVNSPNFLILPKILASIIFNPLLIAISIVFGIWGGYLAGIATGSWSKADYITGI 181

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   I+    K    A  I  V    G+ V   S  +G+  T  VV +I  +II +
Sbjct: 182 QMYMPQHFIWYAFFKTAVFAFLIATVPAYFGYNVKGGSLEVGRASTQAVVWTIVAIIITN 241

Query: 362 SLFAIFYFA 370
            +    + +
Sbjct: 242 LILTQMFLS 250


>gi|330991409|ref|ZP_08315360.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329761428|gb|EGG77921.1| putative ABC transporter permease protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 261

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 120/253 (47%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +            + G V        +   +   +   L   +  +G   +PVV L +  
Sbjct: 8   VAGLGRAVLDIVRMAGKVALFAARALSHVVRPPFYWRILWGTLVEIGFFSLPVVALTALF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+A+ AEIG+M++
Sbjct: 68  SGGVIALQSYTGFAQYHAQNAIAGIVILAVTRELGPVLAGLMVAGRVGAAMSAEIGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  + ++ L++PR+ A  ++LP L ++A+   ++G   V     D   + +
Sbjct: 128 TDQIDALSTLSTNPMKYLVTPRLVAGTLALPFLVLVADILGVLGGFTVCVMKLDFSPSAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +   ++  + ++  GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 IAATIASLKVMDVTVGLVKAAIFGFLIALMGCYHGYNSRGGAEGVGAATTAAVVAASILL 247

Query: 358 IIIDSLFAIFYFA 370
           +  D L    +F+
Sbjct: 248 LTFDYLLTDVFFS 260


>gi|29349246|ref|NP_812749.1| hypothetical protein BT_3838 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253573093|ref|ZP_04850484.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29341154|gb|AAO78943.1| putative ABC transporter [Bacteroides thetaiotaomicron VPI-5482]
 gi|251837316|gb|EES65416.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 247

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   +   + + F    + +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIILMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|68249643|ref|YP_248755.1| ABC transporter permease [Haemophilus influenzae 86-028NP]
 gi|68057842|gb|AAX88095.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 86-028NP]
 gi|309973443|gb|ADO96644.1| Phospholipid ABC transporter, permease component [Haemophilus
           influenzae R2846]
          Length = 261

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             LG              + +     L++QM+ +GV  + +++L    
Sbjct: 6   ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G+S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGSSLVGVDWKGVDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++ + + +I  G IKA F A A+  +A+  G+     S  + +  T  VV +  +
Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFILTAIMFG 259


>gi|312131750|ref|YP_003999090.1| hypothetical protein Lbys_3075 [Leadbetterella byssophila DSM
           17132]
 gi|311908296|gb|ADQ18737.1| protein of unknown function DUF140 [Leadbetterella byssophila DSM
           17132]
          Length = 243

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G  +    E        K +    I +   +G+  + +V +++F  GAV   Q    L 
Sbjct: 5   FGKFLLFLYELFTRRESLKVYWKRFIDECMMIGIDSLLIVCIVAFFIGAVTCVQINANLV 64

Query: 192 QFGAEIFSI-DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 + + +++  + L E+      V++AG+ GS I +E+G+M+I E+I+A+  MG++
Sbjct: 65  SPIIPTYIVSNIVRDMMLLELSSTFICVILAGKVGSNIASELGTMRITEQIEALEVMGIN 124

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               L+ P++ A  +  P+L IL+ F  I+G  I       I    +      +    N+
Sbjct: 125 AASYLVLPKVLAAFVMFPILAILSGFIGIVGGYIAGTATGIITPEQYIYGIRFSFIPFNL 184

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              +IK+      I  ++  +GF     +  +GK  TT V  S   ++I D L A    
Sbjct: 185 VIPIIKSAVFGVLIATISAYKGFYTRGGALEVGKVSTTAVTNSCIAILIADYLLAELLT 243


>gi|298384787|ref|ZP_06994346.1| membrane protein [Bacteroides sp. 1_1_14]
 gi|298261931|gb|EFI04796.1| membrane protein [Bacteroides sp. 1_1_14]
          Length = 247

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   +   + + F    + +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|282880876|ref|ZP_06289569.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305258|gb|EFA97325.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 250

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 2/250 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I    +     G  +   G   +   + + F    I++M  +GV  +P+V+LISF  GA
Sbjct: 2   VIKLIITYLITFGKYLLLMGRTFSRPERMRMFFKQYIKEMTKLGVDSIPLVLLISFFIGA 61

Query: 181 VIAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           VI  Q    +       ++   +   + L E       +++AG+ GS I +E+G+M++ +
Sbjct: 62  VICIQMKINVQSPWMPRWTTGYVTREILLLEFSSAFMCLILAGKIGSNIASELGTMRVTQ 121

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+  MG++    LI P+I  LI  +P L I ++ + +IGA         +  A   +
Sbjct: 122 QIDALDIMGVNPACYLILPKIMGLITIMPFLVIFSSVAGMIGAYATA-YSGVLSPADLTT 180

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +  +  I+  +IK+   A  I  V+   GF+V   + ++G+  T  VV S  +V+ 
Sbjct: 181 GLQYSFKVWFIWMSIIKSLVFAFIIASVSSYYGFSVEGGAVAVGEASTNAVVSSSVLVLF 240

Query: 360 IDSLFAIFYF 369
            D        
Sbjct: 241 ADVFLTPLLS 250


>gi|150009005|ref|YP_001303748.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
 gi|256840994|ref|ZP_05546501.1| ABC transporter permease [Parabacteroides sp. D13]
 gi|262383895|ref|ZP_06077031.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
 gi|298375763|ref|ZP_06985719.1| membrane protein [Bacteroides sp. 3_1_19]
 gi|301312055|ref|ZP_07217977.1| putative membrane protein [Bacteroides sp. 20_3]
 gi|149937429|gb|ABR44126.1| conserved hypothetical protein, putative ABC transporter permease
           protein [Parabacteroides distasonis ATCC 8503]
 gi|256736837|gb|EEU50164.1| ABC transporter permease [Parabacteroides sp. D13]
 gi|262294793|gb|EEY82725.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
 gi|298266800|gb|EFI08457.1| membrane protein [Bacteroides sp. 3_1_19]
 gi|300830157|gb|EFK60805.1| putative membrane protein [Bacteroides sp. 20_3]
          Length = 248

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 2/240 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H +G       +      ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +
Sbjct: 4   ALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQIS 63

Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +S      F        + L E    + A+++AG+ GS I +EIG+M++ E+IDA+  
Sbjct: 64  LNISSPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTA 305
           MG++    LI P++  L+I +P+L I + F+ I+G     +     +  + F        
Sbjct: 124 MGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYF 183

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +  
Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243


>gi|313886966|ref|ZP_07820667.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923573|gb|EFR34381.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 251

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +   ++G       +      K+  F   LIR+M   G+  + +V++ISF  G VI  
Sbjct: 5   IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q +  +S      F        +   E    +  +++AG+ GS+I +E+ +M++ E+IDA
Sbjct: 65  QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L++ +P+L++++  + ++G  +  +    I  + F     +
Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + NIF  +IK+   A  I   A   G+ V   +  +G+  T  VV S  ++++ D +
Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVM 244

Query: 364 FAIFYF 369
                F
Sbjct: 245 LTSLLF 250


>gi|261379496|ref|ZP_05984069.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           subflava NJ9703]
 gi|319638901|ref|ZP_07993659.1| ABC transport inner membrane subunit [Neisseria mucosa C102]
 gi|284797959|gb|EFC53306.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           subflava NJ9703]
 gi|317399805|gb|EFV80468.1| ABC transport inner membrane subunit [Neisseria mucosa C102]
          Length = 258

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +     +  A S          IRQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARPRLSIRQIYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  ++  +   +F
Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVEWLGLDGGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T   ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|189462219|ref|ZP_03011004.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136]
 gi|189431072|gb|EDV00057.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136]
          Length = 246

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G   A   +F+ +L     +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYLMLMGRVFARPERFRMYLKQYRNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  MG++
Sbjct: 68  SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALDIMGVN 127

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I  L+  +PLL   + F+ +IGA    W             F  +     +
Sbjct: 128 SASYLILPKILGLMTMIPLLVTFSIFAGVIGAFCTAWFAGITNATDLEYGFQYSFVEWYV 187

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +   IK+   A  I  V+   G+ V   S ++GK  T  VV S  +++  D +      
Sbjct: 188 WCSFIKSLVFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVCSSVLILFSDLILTQLLS 246


>gi|33863666|ref|NP_895226.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9313]
 gi|33635249|emb|CAE21574.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9313]
          Length = 248

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +   + L  Q+   G     +V++     G V   Q A +LS
Sbjct: 10  LGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  + 
Sbjct: 70  RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  IL    A+    +     Y IP  VF++   +  T  ++ 
Sbjct: 130 VEYLVVPRVIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIK+      I ++A   G         +G   T  VV ++  V ++D L     F+
Sbjct: 190 FMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248


>gi|157148765|ref|YP_001456084.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895]
 gi|157085970|gb|ABV15648.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTLRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR+WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRLWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQDAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|156935718|ref|YP_001439634.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533972|gb|ABU78798.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +          +   G              +F+     L+RQ+Y VGV  + ++I+    
Sbjct: 6   LASMGQRGLKFSASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYNVGVLSMIIIIVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +ISPR WA +ISLPLLT++     + G S+V   +  I    F
Sbjct: 126 TEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVNWKGIDAGFF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV +   
Sbjct: 186 WSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLA 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFVLTALMFG 259


>gi|124268284|ref|YP_001022288.1| hypothetical protein Mpe_A3100 [Methylibium petroleiphilum PM1]
 gi|124261059|gb|ABM96053.1| putative membrane protein [Methylibium petroleiphilum PM1]
          Length = 260

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 120/253 (47%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +Q   LG      G   AS          ++ Q++++G   + ++ +     G
Sbjct: 8   DVGYAVRAQLTGLGAAARLFGRMLASFGPALRRGRLVVDQVHFLGNHSLAIITVSGLFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  E
Sbjct: 68  FVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M +D V+ +++PR W  + ++PLL  + +   I+G   V      I    F+S
Sbjct: 128 QLTAMEMMAVDPVQRVLAPRFWGGVFAMPLLAAVFSAVGILGGWAVGVLLIGIDAGGFWS 187

Query: 300 RFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +         ++  G++K+      +  VA+ EG+        + +  T  VV +   V+
Sbjct: 188 QMQGGVDVFKDVGNGIVKSMVFGVTVTFVALWEGYTCQPTPEGVSRATTRTVVVASLAVL 247

Query: 359 IIDSLFAIFYFAI 371
            +D +     F+I
Sbjct: 248 GLDFVLTAMMFSI 260


>gi|330430336|gb|AEC21670.1| hypothetical protein PT7_3130 [Pusillimonas sp. T7-7]
          Length = 262

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 131/268 (48%), Gaps = 8/268 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
             S   L   +G ++   I+   +   + G +++ +                + +Q++++
Sbjct: 1   MTSPVQLIAALGARVRNSISGMGAFMRLAGAILARSDIVFKRP-------GLISQQIHFI 53

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   + ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR
Sbjct: 54  GNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGR 113

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +G+++ AEIG MK  E+I A+  M +D +R +++PR W  ++++P+L  + +   IIG  
Sbjct: 114 AGTSLTAEIGLMKAGEQIAAMEVMAVDPIRRVLAPRFWGGVVAMPVLAAVFSMVGIIGGW 173

Query: 284 IVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           IV      I    F+S+         ++  G +K+     A+ ++A+  G+        +
Sbjct: 174 IVGVVLIGIDPGAFWSQMQGGVDVFKDVLNGFVKSVVFGVAVTLIALHAGWTAKATPEGV 233

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +  T  VV    +V+ +D +     F+
Sbjct: 234 SRATTRTVVSGSLMVLGLDFILTALMFS 261


>gi|187930306|ref|YP_001900793.1| hypothetical protein Rpic_3239 [Ralstonia pickettii 12J]
 gi|187727196|gb|ACD28361.1| protein of unknown function DUF140 [Ralstonia pickettii 12J]
          Length = 255

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 1/250 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                      G           +S         +I Q+ ++G     ++ +     G V
Sbjct: 6   GRFVLVLISRFGYAARTLISLIGASGDVLRRPRLVIEQLRFIGNDSFIIIAVSGLFVGFV 65

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  E++
Sbjct: 66  LGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQL 125

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  M +D +  +++PR WA  I++PLL  + +   I+G   V      +    F+S+ 
Sbjct: 126 IAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDPGAFWSQM 185

Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            +    + ++  G+IK+     A+  +A+ +G+        + +  T  VV +   V+ +
Sbjct: 186 QAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTRTVVIASLTVLAL 245

Query: 361 DSLFAIFYFA 370
           D +     F+
Sbjct: 246 DFVLTALMFS 255


>gi|241664474|ref|YP_002982834.1| hypothetical protein Rpic12D_2892 [Ralstonia pickettii 12D]
 gi|240866501|gb|ACS64162.1| protein of unknown function DUF140 [Ralstonia pickettii 12D]
          Length = 255

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 117/250 (46%), Gaps = 1/250 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                      G           +S         ++ Q+ ++G     ++ +     G V
Sbjct: 6   GRFVLVLISRFGYAARTLISLIGASGDVLRRPRLVLEQLRFIGNDSFIIIAVSGLFVGFV 65

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  E++
Sbjct: 66  LGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQL 125

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  M +D +  +++PR WA  I++PLL  + +   I+G   V      +    F+S+ 
Sbjct: 126 IAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDPGAFWSQM 185

Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            +    + ++  G+IK+     A+  +A+ +G+        + +  T  VV +   V+ +
Sbjct: 186 QAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTRTVVIASLTVLAL 245

Query: 361 DSLFAIFYFA 370
           D +     F+
Sbjct: 246 DFVLTALMFS 255


>gi|145627949|ref|ZP_01783750.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 22.1-21]
 gi|145632451|ref|ZP_01788186.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 3655]
 gi|145634244|ref|ZP_01789955.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittAA]
 gi|145636462|ref|ZP_01792130.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittHH]
 gi|145638100|ref|ZP_01793710.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittII]
 gi|148826300|ref|YP_001291053.1| ABC transporter permease [Haemophilus influenzae PittEE]
 gi|229843875|ref|ZP_04464016.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 6P18H1]
 gi|229846118|ref|ZP_04466230.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 7P49H1]
 gi|144979724|gb|EDJ89383.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 22.1-21]
 gi|144987358|gb|EDJ93888.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 3655]
 gi|145268688|gb|EDK08681.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittAA]
 gi|145270287|gb|EDK10222.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittHH]
 gi|145272429|gb|EDK12336.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittII]
 gi|148716460|gb|ABQ98670.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittEE]
 gi|229811122|gb|EEP46839.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 7P49H1]
 gi|229812869|gb|EEP48557.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae 6P18H1]
 gi|301169827|emb|CBW29431.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Haemophilus influenzae 10810]
 gi|309751266|gb|ADO81250.1| Phospholipid ABC transporter, permease component [Haemophilus
           influenzae R2866]
          Length = 261

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             LG              + +     L++QM+ +GV  + +++L    
Sbjct: 6   ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVGVDWKGVDSGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   ++ + + +I  G IKA F A A+  +A+  G+     S  + +  T  VV +  +
Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D +     F 
Sbjct: 246 VLGLDFILTAIMFG 259


>gi|171060067|ref|YP_001792416.1| hypothetical protein Lcho_3393 [Leptothrix cholodnii SP-6]
 gi|170777512|gb|ACB35651.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6]
          Length = 259

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 119/256 (46%), Gaps = 1/256 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +         +   +GL           +         +  Q++++G   + ++ +   
Sbjct: 4   GLSDLGYSVRCKLADIGLATRLLLRLLVLTPVALRRWRLVFDQIHFLGNHSLAIIGVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+A+ AEIG MK
Sbjct: 64  FVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTALTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ A+  M +D ++ +++PR    ++++PLL  + +   IIG  +V      +    
Sbjct: 124 SGEQLAAMEMMAVDPIQRVLAPRFIGGMVAMPLLAAVFSAVGIIGGWLVGVVMIGVDAGS 183

Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+         +I  G+IK+   A  +  +A+ +G+        + +  T  VV S  
Sbjct: 184 FWSQMQGGVDVFKDIGNGVIKSVVFALIVTFIALLQGYECQPTPEGVARATTRTVVVSSL 243

Query: 356 IVIIIDSLFAIFYFAI 371
            V+  D +     F+I
Sbjct: 244 AVLAFDFVLTALMFSI 259


>gi|148828248|ref|YP_001293001.1| ABC transporter permease [Haemophilus influenzae PittGG]
 gi|148719490|gb|ABR00618.1| conserved ABC-type transport system protein, permease component
           [Haemophilus influenzae PittGG]
          Length = 261

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
                      LG              + +     L++QM+ +GV  + +++L     G 
Sbjct: 9   LGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGM 68

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+
Sbjct: 69  VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + ++  M +D +R +I+PR WA +IS+P+L+IL     I G S+V   +  +    F+S 
Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVGVDWKGVDSGSFWSV 188

Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             ++ + + +I  G IKA F A A+  +A+  G+     S  + +  T  VV +  +V+ 
Sbjct: 189 MQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLVVLG 248

Query: 360 IDSLFAIFYFA 370
           +D +     F 
Sbjct: 249 LDFILTAIMFG 259


>gi|42524770|ref|NP_970150.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39576980|emb|CAE78209.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 262

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 129/251 (51%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F          +G V   + +    +   + +   +  Q+Y +G+  +P++++ +   G 
Sbjct: 8   FTVFMMEVLFFIGGVGLLSRDVFRETIHGRIYYKLISEQIYQIGMRSLPLIVITAVSIGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V++ Q    L +FG +++   L+++  LRE+G + T++M+A R G+ I +EIGSM + ++
Sbjct: 68  VMSLQFGMGLEKFGGKLYVPKLLAVTILREMGPVFTSLMLAARVGAGIASEIGSMVVTQQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDAIR +G   ++ ++ PR+ A +I+LP+L  +AN    +G  I+     ++    ++ +
Sbjct: 128 IDAIRALGTSPIKKIVIPRVLACLITLPILVSIANIVGNLGGLIIGATELNLDPNFYYLK 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +T+ + +  +G  K  F A  I I +   G  V   +  +G   T  VV S  ++++ 
Sbjct: 188 VMTTSNIQDYLSGFAKTFFFAIFIAIPSCYFGLNVKAGTKEVGIATTKAVVVSSILIVVG 247

Query: 361 DSLFAIFYFAI 371
           D   +  ++ +
Sbjct: 248 DFFLSKLFWIV 258


>gi|88811866|ref|ZP_01127119.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231]
 gi|88790750|gb|EAR21864.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231]
          Length = 258

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 1/255 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +  F   + +    LG                      +I Q+Y  GV  + ++++  
Sbjct: 3   EWLRLFGEQTLAATARLGRGYLFLLRVLLGLPGLLLRPGLVITQIYATGVLSLLIIVVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L  FGAE     L+++   RE+G +++A++ +GR+GSA+ AEIG M
Sbjct: 63  LFVGMVLGLQGYNTLVNFGAEQSLGVLVALSLTRELGPVVSALLFSGRAGSALTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++  +  M +D  R +++PR+   +I+LPLL  +     + G   V      +   
Sbjct: 123 KATEQLSGMEMMAVDPERRVVAPRLLGGMIALPLLAAIFTLVGVFGGYFVGTVLLGVDSG 182

Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++S+  +  +   ++  G+IK+      +   A+ EGF     S  + +  T  VV S 
Sbjct: 183 AYWSQMQAQVSFTDDVVNGVIKSLVFGFVVSWTAVFEGFDCAPTSEGVSRATTRAVVHSS 242

Query: 355 SIVIIIDSLFAIFYF 369
             V+ +D +     F
Sbjct: 243 LAVLGLDFILTALMF 257


>gi|309782892|ref|ZP_07677612.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308918316|gb|EFP63993.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 255

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 1/250 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                      G           +S         +I Q+ ++G     ++ +     G V
Sbjct: 6   GRFVLVLISRFGYAARTLISLIGASGDVLRRPRLVIEQLRFIGNDSFIIIAVSGLFVGFV 65

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +  QG   L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  E++
Sbjct: 66  LGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQL 125

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  M +D +  +++PR WA  I++PLL  + +   I+G   V      +    F+S+ 
Sbjct: 126 IAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDPGAFWSQM 185

Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            +    + ++  G+IK+     A+  +A+ +G+        + +  T  VV +   V+ +
Sbjct: 186 QAGVDVMDDVLNGVIKSFVFGVAVTFIALYQGYEAKATPEGVSRATTRTVVIASLTVLAL 245

Query: 361 DSLFAIFYFA 370
           D +     F+
Sbjct: 246 DFVLTALMFS 255


>gi|288942538|ref|YP_003444778.1| hypothetical protein Alvin_2840 [Allochromatium vinosum DSM 180]
 gi|288897910|gb|ADC63746.1| protein of unknown function DUF140 [Allochromatium vinosum DSM 180]
          Length = 259

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G+ ++  +        +L  ++   GE              L  Q++ +GV 
Sbjct: 1   MLDPLARLGRGVLDALERLGRGHLLLLAILLGLGEVLRRP-------RLLWEQLFNIGVL 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V +     G V+A QG + LSQFGA      +++   +RE+G ++TA+++AGR+GS
Sbjct: 54  SLLIVGVSGLFVGMVLALQGYYVLSQFGAAESLGVMVAASLVRELGPVVTALLVAGRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++  +  M +D VR ++ PR    ++S+PLL  + +   ++G   V 
Sbjct: 114 ALTAEIGLMKATEQLSGLEMMAVDPVRRILVPRFVGGVLSMPLLAAIFSAVGVLGGYFVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    ++S+  +      ++  G+IK+      +  VA+ +G+     S  + + 
Sbjct: 174 VGLLGVDEGAYWSQMQAKIDFDEDLVNGVIKSLAFGVVVTWVALFQGYDTVPTSEGVSRS 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +  +V+ +D +     F 
Sbjct: 234 TTRAVVHAALVVLGLDFVLTALMFG 258


>gi|160900967|ref|YP_001566549.1| hypothetical protein Daci_5535 [Delftia acidovorans SPH-1]
 gi|160366551|gb|ABX38164.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1]
          Length = 260

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             IG  + + +        + G +++  G               +  Q++++G   + ++
Sbjct: 7   ARIGAAVRQQLTQLGMGTRLFGRLLALMGPALGRP-------RLIGDQIHFLGNYSLAII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V+  QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+A+ AE
Sbjct: 60  GVSGLFVGFVLGLQGYYTLQRYGSAEALGLLVALSLVRELGPVVTALLFAGRAGTALTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MK  E++ A+  M +D VR +++PR  A +I++PLL  + +   +IG  +V      
Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVRRILAPRFVAGLIAMPLLAAVFSAVGVIGGWLVGVVMIG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F+ +  +      ++  G++K+     A+  +A+ +G+A       + +  T  V
Sbjct: 180 VDGGAFWGQMQNGVDWWYDLGNGVLKSLVFGVAVTFIALLQGYAAKPTPEGVSRATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D L     F++
Sbjct: 240 VMASLAVLGLDFLLTATMFSL 260


>gi|237712741|ref|ZP_04543222.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408122|ref|ZP_06084669.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|293369494|ref|ZP_06616073.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|294644221|ref|ZP_06721991.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294808601|ref|ZP_06767341.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298480165|ref|ZP_06998363.1| membrane protein [Bacteroides sp. D22]
 gi|229447218|gb|EEO53009.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353674|gb|EEZ02767.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292635379|gb|EFF53892.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|292640431|gb|EFF58679.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294444200|gb|EFG12927.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298273446|gb|EFI15009.1| membrane protein [Bacteroides sp. D22]
          Length = 247

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|121635620|ref|YP_975865.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis FAM18]
 gi|120867326|emb|CAM11097.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis FAM18]
 gi|325131371|gb|EGC54080.1| putative membrane protein [Neisseria meningitidis M6190]
 gi|325133423|gb|EGC56087.1| putative membrane protein [Neisseria meningitidis M13399]
 gi|325141491|gb|EGC63964.1| putative membrane protein [Neisseria meningitidis 961-5945]
 gi|325143674|gb|EGC65993.1| putative membrane protein [Neisseria meningitidis M01-240013]
 gi|325199054|gb|ADY94510.1| putative membrane protein [Neisseria meningitidis G2136]
 gi|325206870|gb|ADZ02323.1| putative membrane protein [Neisseria meningitidis M04-240196]
          Length = 258

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLSLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|312888399|ref|ZP_07747975.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
 gi|311299233|gb|EFQ76326.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM
           18603]
          Length = 243

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 1/239 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             + LG  I           KF  +   ++R+M  +G+  + ++ +IS   GAV   Q A
Sbjct: 1   MLYHLGRYILLMKLSFKRPEKFSVYWAEVMREMVSIGLGSLGIISIISVFIGAVATIQTA 60

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           FQL S F  +     +     + E    ++A+++AGR GS+I ++IG+M++ E+IDA+  
Sbjct: 61  FQLVSDFIPKTIVGTITRDSTILEFSPTISALVLAGRVGSSIASQIGTMRVTEQIDALEI 120

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LISP+I + ++ +PLLT+++    ++G  I      ++  A + +       
Sbjct: 121 MGVNAPGYLISPKIISGVLMIPLLTVISISLGLLGGYIACAASSEVSTADYITGLTDGFK 180

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              +   ++KA F    I  +   +GF     +  +G+  T  VV S   ++  D + +
Sbjct: 181 TIILQVSMVKATFFGFIITSICAYQGFYTSGGALEVGQSATRGVVFSCIFILFADLVIS 239


>gi|293602880|ref|ZP_06685319.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818674|gb|EFF77716.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 262

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 132/263 (50%), Gaps = 8/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N+   +G  + K I+         G +++ +G   +           + +Q++++G   +
Sbjct: 6   NMVGALGGWVRKQISGIGFFTRFFGGMLARSGIIFSRP-------RLVSQQVHFIGNYSL 58

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++
Sbjct: 59  LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   ++G  +V   
Sbjct: 119 TAEIGLMKAGEQLSAMEMMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGVLGGWVVGVL 178

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+S+  +   +  ++  G+IK+      + +VA+ EG+        + +  T
Sbjct: 179 MIGVDAGAFWSQMQNGVDVWNDVANGVIKSVVFGITVTLVALYEGWQAKPTPEGVARATT 238

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV     V+ +D L     F 
Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261


>gi|288924563|ref|ZP_06418500.1| ABC transporter, permease [Prevotella buccae D17]
 gi|315607425|ref|ZP_07882421.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella buccae ATCC 33574]
 gi|288338350|gb|EFC76699.1| ABC transporter, permease [Prevotella buccae D17]
 gi|315250857|gb|EFU30850.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella buccae ATCC 33574]
          Length = 248

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G  +   G   +   + + F+   +++M  +GV  + +V+LISF  GAVI  
Sbjct: 3   ILKWLTTFGKYLILMGRSFSRPERMRMFMKRYVKEMSQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+  +P L I ++   IIGA    +  + +           
Sbjct: 123 LDIMGVNSAGYLILPKILGLVTIMPFLVIFSSAMGIIGAYATAYVGHILSPDDLTLGLQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     ++  +IK+ F A  I  V+   G+ V   S  +G+  T  VV S  +++  D  
Sbjct: 183 SFNAWFVWMSIIKSLFFAFIIASVSSYFGYTVEGGSVEVGESSTDAVVCSSVLILFSDVF 242

Query: 364 FAIFYF 369
                 
Sbjct: 243 LTQVLS 248


>gi|261401680|ref|ZP_05987805.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           lactamica ATCC 23970]
 gi|269208206|gb|EEZ74661.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           lactamica ATCC 23970]
          Length = 258

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSVAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|159026095|emb|CAO86324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 288

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 113/264 (42%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            +++   +   +  F  +  S      L I  TG      +  K        QM   G +
Sbjct: 14  VRSILVAMKDLLAIFSKELSSWFRRCWLAILLTGRVFYFLFTRKPDWRVTQEQMVAAGPA 73

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + + ++ + V G +   Q A +    GA      ++++   RE+  ++ A+++AGR GS
Sbjct: 74  SLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGRVGS 133

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A  AEIG+MK+ E+IDA+  +  D V  L+ PR+ A  + +P L+I+A    +    +V 
Sbjct: 134 AFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSIMALLIGLGSGLLVG 193

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              Y I  +VF         + ++ +G +K       I I+    G      +  +G+  
Sbjct: 194 QSLYGIANSVFLDSVRGFLRVGDVLSGPVKGLVFGALIAIIGCNWGLTTDGGAKGVGQAT 253

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV  +  + + + L     F 
Sbjct: 254 TAAVVTMLLAIFVSNLLMTWILFQ 277


>gi|294634664|ref|ZP_06713197.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella
           tarda ATCC 23685]
 gi|291091910|gb|EFE24471.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella
           tarda ATCC 23685]
          Length = 260

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +        +     G              +       L RQ+Y VGV  + ++++   
Sbjct: 5   GLASLGRRGINVCAAFGRAGLMLFSALVGRPEPAKQWPLLRRQLYSVGVQSLLIIMVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA +IS+PLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAIGIWGGSVVGVDWKGIDAGF 184

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|254670842|emb|CBA07277.1| putative membrane protein [Neisseria meningitidis alpha153]
 gi|308390063|gb|ADO32383.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis alpha710]
 gi|309378880|emb|CBX22467.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|319409726|emb|CBY90032.1| conserved hypothetical membrane protein [Neisseria meningitidis WUE
           2594]
 gi|325127428|gb|EGC50359.1| putative membrane protein [Neisseria meningitidis N1568]
 gi|325137489|gb|EGC60074.1| putative membrane protein [Neisseria meningitidis ES14902]
          Length = 258

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|257092255|ref|YP_003165896.1| hypothetical protein CAP2UW1_0620 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044779|gb|ACV33967.1| protein of unknown function DUF140 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 271

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 131/267 (49%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
                +    IG  +   +      +    +++  +G+               IR++YY 
Sbjct: 8   PGPLLSTIASIGHHVTDALQRLGFASRFFVMLLLCSGQSFRRP-------NLTIREIYYS 60

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   + ++++     G V+  QG   L ++G+      L+++  +RE+G ++ A++ A R
Sbjct: 61  GFQSLLIIMVSGLFIGMVLGMQGYETLQRYGSADALGILVALSLVRELGPVVAALLFASR 120

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GS+I AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  L + + + G  
Sbjct: 121 AGSSITAEIGLMKATEQLTAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSATGVFGGY 180

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           ++   +  +    F+S+  ++     +I++G++K+     A+ ++A+ EG+     +  +
Sbjct: 181 LIGVVFIGVDDGAFWSQMQASVDFRYDIWSGIVKSFVFGVAVSLIAVFEGYDALPTAEGV 240

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
              + + VV+S   ++ +D +   F F
Sbjct: 241 SSSIKSTVVKSALAILALDFVLTSFMF 267


>gi|313677561|ref|YP_004055557.1| hypothetical protein Ftrac_3477 [Marivirga tractuosa DSM 4126]
 gi|312944259|gb|ADR23449.1| protein of unknown function DUF140 [Marivirga tractuosa DSM 4126]
          Length = 243

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G      G        F  +    I +   +G + + +V + S   GAV   Q A+
Sbjct: 1   MKSIGAYFIFLGSMFVRRESFSSYFKLTINECISIGWNSILIVAITSTFMGAVTTVQTAY 60

Query: 189 QLSQFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L     + + +  ++   +  E+   +TA++IAG+ GS+I   +G+M+I E+IDA+  M
Sbjct: 61  NLVSPLIQNYVVAQVTREMVVLELAPTITAIVIAGKVGSSIAGGLGTMRITEQIDALEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    L+ P+I A +I  PLL ++A F A+ G  I       +    +          
Sbjct: 121 GVNASSYLVLPKIVAAMIMYPLLVVIAGFLALYGGYIAGTLTGILTETEYVYGIRIDFNP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +   LIK+   A  I  ++  +GF     +  +G+  T+ V +S   V++ D + A  
Sbjct: 181 FTVQFALIKSLVFAFLIASISAFQGFFTTGGALEVGQSSTSAVTKSCIAVLLADYILAEL 240

Query: 368 YFA 370
              
Sbjct: 241 LLN 243


>gi|87303089|ref|ZP_01085887.1| possible transporter, membrane component [Synechococcus sp. WH
           5701]
 gi|87282256|gb|EAQ74216.1| possible transporter, membrane component [Synechococcus sp. WH
           5701]
          Length = 249

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 112/243 (46%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H LG  +   G+  ++  K +  L  L  QM   G     +VI+ +   G V   Q A
Sbjct: 6   YIHRLGSSVMIGGQSISALAKGRINLNDLFEQMLEAGPGSFLIVIITALAAGTVFNIQVA 65

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +L++ GA      ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +
Sbjct: 66  AELTRQGAGFSVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITML 125

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
             D V  L+ PR+ A+++  P+  +L     I    +     Y IP  VF++   +    
Sbjct: 126 RTDPVEYLVVPRVLAMVVMAPVQCLLFFVVGIWSGQVSSTFLYSIPPTVFWNSVRTWMEP 185

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           +++ + L+KA      I ++A   G         +G   T  VV  +  V ++D +    
Sbjct: 186 SDLPSMLVKALVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLVDVVLTQV 245

Query: 368 YFA 370
            F 
Sbjct: 246 LFG 248


>gi|33865118|ref|NP_896677.1| transporter, membrane component [Synechococcus sp. WH 8102]
 gi|33638802|emb|CAE07097.1| possible transporter, membrane component [Synechococcus sp. WH
           8102]
          Length = 249

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L  Q+   G   + +V++IS   G+V   Q A +L+
Sbjct: 10  LGASLLIGGQAVTATLRGRINTVDLQDQLMEAGPGTLLIVLIISIAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+        A+    I     Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLMAVWSGQITSTALYNIPPAVFWTSVRTWMDPTDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I ++A   G         +G   T  VV  + +V I+D +     F 
Sbjct: 190 FMLVKALVFGLIIAVIACGWGLTTKGGPKEVGTSTTGAVVMILILVAIMDVVLTQVLFG 248


>gi|325268715|ref|ZP_08135344.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella multiformis DSM 16608]
 gi|324988959|gb|EGC20913.1| ABC superfamily ATP binding cassette transporter permease protein
           [Prevotella multiformis DSM 16608]
          Length = 248

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            +  G  +   G   +   + + FL   +++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +    +   + L E    +  ++++G+ GS I +E+G+M++ ++IDA+  M
Sbjct: 67  NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P++  LI  +P L I +  + IIGA    +  + I      +        
Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNA 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK  F A  I  V+   G+ V   S  +GK  T  VV S  +++  D      
Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQI 246

Query: 368 YF 369
             
Sbjct: 247 LS 248


>gi|283836259|ref|ZP_06356000.1| toluene tolerance ABC efflux transporter, permease [Citrobacter
           youngae ATCC 29220]
 gi|291067623|gb|EFE05732.1| toluene tolerance ABC efflux transporter, permease [Citrobacter
           youngae ATCC 29220]
          Length = 260

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     LIRQ+Y VGV  + ++I+   
Sbjct: 5   ALASLGHRGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|238789753|ref|ZP_04633535.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC
           33641]
 gi|238722112|gb|EEQ13770.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC
           33641]
          Length = 235

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 1/234 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     + +     L++Q+Y VGV  + ++++     G V+  QG   L+ + AE 
Sbjct: 1   MLFNALVGRPEPRKQWPLLLKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEA 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               ++S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E+I ++  M +D +R +++
Sbjct: 61  SLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVA 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIK 316
           PR WA +IS+PLLT +     I G S+V   +  I    F+S   S      ++   LIK
Sbjct: 121 PRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGGFFWSAMQSAVEWRTDLLNCLIK 180

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   A  +  +A+  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 181 SLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 234


>gi|329962630|ref|ZP_08300578.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT
           12057]
 gi|328529661|gb|EGF56559.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT
           12057]
          Length = 258

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            VK++         +G  I   G   A   + + F    I +M  +GV+ + +V+LISF 
Sbjct: 5   AVKYLRVMIKALKTVGRYIMLMGRVFARPERMRMFFRQYINEMEQLGVNSIGIVLLISFF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            GAVI  Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M+
Sbjct: 65  IGAVITIQIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + ++IDA+  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +    
Sbjct: 125 VTQQIDALEIMGVNSANYLILPKISAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVD 184

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
                        I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +
Sbjct: 185 LEYGLQYMFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVL 244

Query: 357 VIIIDSLFAIFYFA 370
           ++  D +       
Sbjct: 245 ILFSDLILTQLLMG 258


>gi|15677795|ref|NP_274959.1| hypothetical protein NMB1965 [Neisseria meningitidis MC58]
 gi|218767464|ref|YP_002341976.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis Z2491]
 gi|254804222|ref|YP_003082443.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|296313905|ref|ZP_06863846.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           polysaccharea ATCC 43768]
 gi|313669181|ref|YP_004049465.1| ABC transport inner membrane subunit [Neisseria lactamica ST-640]
 gi|7227225|gb|AAF42294.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|121051472|emb|CAM07765.1| putative ABC transport inner membrane subunit [Neisseria
           meningitidis Z2491]
 gi|254667764|emb|CBA03695.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|254672981|emb|CBA07458.1| putative ABC transport system permease protein [Neisseria
           meningitidis alpha275]
 gi|261393293|emb|CAX50921.1| conserved hypothetical membrane protein [Neisseria meningitidis
           8013]
 gi|296839439|gb|EFH23377.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           polysaccharea ATCC 43768]
 gi|313006643|emb|CBN88109.1| putative ABC transport inner membrane subunit [Neisseria lactamica
           020-06]
 gi|316985593|gb|EFV64540.1| toluene tolerance protein Ttg2B [Neisseria meningitidis H44/76]
 gi|325129426|gb|EGC52257.1| putative membrane protein [Neisseria meningitidis OX99.30304]
 gi|325135556|gb|EGC58174.1| putative membrane protein [Neisseria meningitidis M0579]
 gi|325139615|gb|EGC62155.1| putative membrane protein [Neisseria meningitidis CU385]
 gi|325201013|gb|ADY96468.1| putative membrane protein [Neisseria meningitidis H44/76]
 gi|325201398|gb|ADY96852.1| putative membrane protein [Neisseria meningitidis M01-240149]
 gi|325204915|gb|ADZ00369.1| putative membrane protein [Neisseria meningitidis M01-240355]
 gi|325207379|gb|ADZ02831.1| putative membrane protein [Neisseria meningitidis NZ-05/33]
          Length = 258

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|124022277|ref|YP_001016584.1| transporter membrane component [Prochlorococcus marinus str. MIT
           9303]
 gi|123962563|gb|ABM77319.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9303]
          Length = 248

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +   + L  Q+   G     +V++     G V   Q A +LS
Sbjct: 10  LGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  + 
Sbjct: 70  RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    A+    +     Y IP  VF++   +  T  ++ 
Sbjct: 130 VEYLVVPRVIAMVVMAPVQCMLFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDMP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+K+      I +++   G         +G   T  VV ++  V ++D L     F+
Sbjct: 190 FMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248


>gi|161506125|ref|YP_001573237.1| hypothetical protein SARI_04313 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867472|gb|ABX24095.1| hypothetical protein SARI_04313 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +              G              +F+     L+RQ+Y VGV  + ++++   
Sbjct: 5   ALASLGRSGIKTVRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|189347228|ref|YP_001943757.1| hypothetical protein Clim_1737 [Chlorobium limicola DSM 245]
 gi|189341375|gb|ACD90778.1| protein of unknown function DUF140 [Chlorobium limicola DSM 245]
          Length = 264

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 115/243 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      +      +     +  K K +    + Q    G   +P+V++ +   G+++A 
Sbjct: 17  AKDFLLTMQEFFLFSMRAFFTLPKLKRYWRDFLDQATICGTDSIPIVLVSAVSIGSLLAI 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       SI  +RE+G LL  +M++ R GS   AE+G+MKI+E+IDA+
Sbjct: 77  EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A ++    LT L++F+ +  A+ +   Y+ +   +F++  +  
Sbjct: 137 RAFGTDPVAKLVMPRLAAALVMFIPLTALSDFAGLQSAAYLAEHYHHLDPGIFWNAVYPR 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   G  KAP  A  I +V+   GF     +  +G+     +V S  +V+I +   
Sbjct: 197 LGPKDFVVGFAKAPVFAIIITLVSSYNGFIAKGGTAGVGRATIKGIVVSSGLVLIANFYV 256

Query: 365 AIF 367
           +  
Sbjct: 257 SKI 259


>gi|87120456|ref|ZP_01076350.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121]
 gi|86164099|gb|EAQ65370.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121]
          Length = 260

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 2/252 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILI 174
           K I      + +     G       +      K   G +  L++Q+Y VGV  + ++++ 
Sbjct: 2   KPIQAAGVRALNTIGAFGQAGLFLIQVMLHRPKSLSGAMGLLMKQIYSVGVLSLVIILVS 61

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
               G V+  QG   L++FG+E     L+++  LRE+G ++TA++ AGR+ SA+ AEIG 
Sbjct: 62  GLFIGMVLGLQGYTILAKFGSEQAVGQLLALTLLRELGPVVTALLFAGRACSALTAEIGL 121

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK  E++ ++  MG+D  R +I+PR  A +I LP+L ++ +   I+G   V   +  I  
Sbjct: 122 MKATEQLSSLEMMGVDPYRRIIAPRFIAGLICLPILCVIFSAVGILGGEFVAVTWLQIHG 181

Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             F+S    +   + ++  G+IKA   A A   +A+ +G+     S  +GK  T  VV  
Sbjct: 182 GSFWSLMQQSVYFSTDVVNGIIKAFCFAIATTWIAVFQGYQCEPTSEGIGKATTRTVVLG 241

Query: 354 ISIVIIIDSLFA 365
              ++ +D +  
Sbjct: 242 SLSILALDFILT 253


>gi|295677863|ref|YP_003606387.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
 gi|295437706|gb|ADG16876.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002]
          Length = 255

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +         ++                   + +Q+++VG   + 
Sbjct: 1   MISTIGRSVITGLGTAGYATRFFLRLVLEIFPLLRRP-------RLVTKQIHFVGNYSLV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D V+++I+PR+WA IIS+P+L  + +   ++G  +V    
Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVLGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+  S   +  ++  G++K+     A+  VA+ +G+        + +  T 
Sbjct: 174 IGVDAGAFWSQMQSGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTR 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|163854451|ref|YP_001628749.1| hypothetical protein Bpet0147 [Bordetella petrii DSM 12804]
 gi|163258179|emb|CAP40478.1| putative membrane protein [Bordetella petrii]
          Length = 259

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 131/265 (49%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  +G  +   ++        LG +++ +G   +           + +Q++++G  
Sbjct: 1   MSGPVQALGGWVRAQVSGVGFFTRFLGALLARSGIAVSRP-------RLVSQQVHFIGNY 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++I+     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 54  SLLIIIVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M +D +R ++ PR+W  II++P+L  + +   I+G  +V 
Sbjct: 114 SLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRLWGGIIAMPVLAAVFSMVGILGGWVVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+  S   +  ++  G++K+      + +VA+ EG+        + + 
Sbjct: 174 VLLIGVDAGAFWSQMQSGVDVWDDVANGVLKSLVFGVTVTLVALYEGWQARPTPEGVARA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV     V+ +D L     F 
Sbjct: 234 TTRTVVVGSLAVLGLDFLLTALMFG 258


>gi|310766231|gb|ADP11181.1| ABC transporter, permease subunit, probable toluene tolerance
           protein [Erwinia sp. Ejp617]
          Length = 235

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 1/234 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     +F+     L++Q+Y +GV  + +V++     G V+  QG   L  +GAE 
Sbjct: 1   MLFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEA 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               ++++  LRE+G +++A++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +IS
Sbjct: 61  SLGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIIS 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIK 316
           PR WA  IS+PLLT++     I+G ++V   +  I    F+S   +   L  +I    IK
Sbjct: 121 PRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSGFFWSAMQNAVDLQTDIINCTIK 180

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   A  +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 181 SAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 234


>gi|86609938|ref|YP_478700.1| hypothetical protein CYB_2505 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558480|gb|ABD03437.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 252

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 119/239 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G      G+      + +    + + Q+  VG+  + +V++ + V   V   Q A +  
Sbjct: 4   VGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAREFI 63

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      +++I   RE+  ++TAV++AGR GSA  AE+G+MK+ E+IDA+  +  D 
Sbjct: 64  NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLRTDP 123

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  + LP+LTIL+  + ++G  I+    Y+I  AVF +   +  +  ++ 
Sbjct: 124 VDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICASAYNISPAVFLNSAQTLLSSWDLL 183

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +KA      I IV    G +    +  +G+  T  VV ++  V + + L +   F 
Sbjct: 184 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLLFQ 242


>gi|253991145|ref|YP_003042501.1| hypothetical protein PAU_03671 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782595|emb|CAQ85759.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
          Length = 262

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +       G              +       L +Q++ VGV  + ++++  
Sbjct: 6   QALAALGRRAIEVFASFGRAGFMLFGAIIGRPEPARQWPLLRQQLFSVGVQSLLIIVVSG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 66  LFIGMVLGLQGYLVLTTYSAEASLGMMVAVSLLRELGPVVTALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     I G ++V   +  I   
Sbjct: 126 KATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGICGGAMVGVDWKGIDSG 185

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++    IK+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 186 FFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 245

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 246 LAVLGLDFVLTALMFG 261


>gi|225077106|ref|ZP_03720305.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens
           NRL30031/H210]
 gi|224951663|gb|EEG32872.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens
           NRL30031/H210]
          Length = 258

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          IRQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGFIQSLGSITLFFLHILAKSGTAFTRPRLSIRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLAKFKSADVLGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  ++  +   +F
Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVEWLGLDGGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T   ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVSTSEGILRASTRTVVSSSLT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFMLTAWMF 256


>gi|46143493|ref|ZP_00135103.2| COG0767: ABC-type transport system involved in resistance to
           organic solvents, permease component [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208757|ref|YP_001053982.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae L20]
 gi|307248316|ref|ZP_07530341.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307257357|ref|ZP_07539127.1| hypothetical protein appser10_13550 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307259627|ref|ZP_07541351.1| hypothetical protein appser11_14250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261768|ref|ZP_07543434.1| hypothetical protein appser12_13270 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307263956|ref|ZP_07545559.1| hypothetical protein appser13_13640 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097549|gb|ABN74377.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|306855186|gb|EFM87364.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306864207|gb|EFM96120.1| hypothetical protein appser10_13550 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306866272|gb|EFM98136.1| hypothetical protein appser11_14250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868586|gb|EFN00397.1| hypothetical protein appser12_13270 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306870718|gb|EFN02459.1| hypothetical protein appser13_13640 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 234

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 121/233 (51%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     +F+     LI+Q+Y +GV  + +++L     G V+  QG   L  F AE 
Sbjct: 1   MLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAET 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               L+S+  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+
Sbjct: 61  SLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIA 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR WA +IS+P+L  +     I G S+V   +  +    F+S   ++   +++  G IK+
Sbjct: 121 PRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKS 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              A A+  +A+  G+     S  + +  T  VV +  +V+ +D +     F 
Sbjct: 181 IIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 233


>gi|144898324|emb|CAM75188.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 267

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 2/265 (0%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
              +   L   +G+   + +++    A +LG  +           +      S+  Q   
Sbjct: 2   PTPNPSALLERLGRAAARGLSEFGFAATLLGQSLYWL--VLGHWRRQPVRAASVAAQAMD 59

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G++ +P++ ++S   G ++A QG + L  FGAE      +++  +RE   L+T +++AG
Sbjct: 60  IGIAALPIITVLSTTIGLMLAIQGIYTLKTFGAESRVTLGVALSVVREFAPLITGILVAG 119

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSA+ A +G+M+IN+EID++  MG++ VR L++P + A+++ +PLLT+ A+   +  A
Sbjct: 120 RSGSALAARLGTMRINQEIDSLTVMGINPVRFLVAPPLAAMMVLMPLLTLWADLVGLFAA 179

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            + I        A +     S   L ++  GL K+      + IV +  G +V   +  +
Sbjct: 180 GLYISIELQGTMAGYADEVLSLLKLNDLLHGLAKSAIFGVLVTIVGVVNGASVSGGAEGV 239

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367
           G+  T  VV +IS ++I D +F   
Sbjct: 240 GRMTTRSVVHAISAIVITDMIFVFL 264


>gi|53720756|ref|YP_109742.1| hypothetical protein BPSL3149 [Burkholderia pseudomallei K96243]
 gi|53724275|ref|YP_104245.1| ABC transporter permease [Burkholderia mallei ATCC 23344]
 gi|67641604|ref|ZP_00440380.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|76810397|ref|YP_335067.1| ABC transporter permease [Burkholderia pseudomallei 1710b]
 gi|83719902|ref|YP_443507.1| ABC transporter permease [Burkholderia thailandensis E264]
 gi|121601502|ref|YP_994512.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124386292|ref|YP_001027757.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126441452|ref|YP_001060680.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126450665|ref|YP_001082296.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|126451565|ref|YP_001067964.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|134283213|ref|ZP_01769914.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|167002607|ref|ZP_02268397.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei PRL-20]
 gi|167582553|ref|ZP_02375427.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167721498|ref|ZP_02404734.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
 gi|167740468|ref|ZP_02413242.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
 gi|167817681|ref|ZP_02449361.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 91]
 gi|167826076|ref|ZP_02457547.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167847585|ref|ZP_02473093.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei B7210]
 gi|167896161|ref|ZP_02483563.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|167904546|ref|ZP_02491751.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912808|ref|ZP_02499899.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 112]
 gi|167920767|ref|ZP_02507858.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
 gi|217424760|ref|ZP_03456257.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|226198280|ref|ZP_03793851.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237814076|ref|YP_002898527.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|242317944|ref|ZP_04816960.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254175241|ref|ZP_04881902.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|254180406|ref|ZP_04887004.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254190369|ref|ZP_04896877.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254198428|ref|ZP_04904849.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254201319|ref|ZP_04907683.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|254206661|ref|ZP_04913012.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|254258882|ref|ZP_04949936.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|254300642|ref|ZP_04968087.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|254357286|ref|ZP_04973560.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
 gi|257137708|ref|ZP_05585970.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|52211170|emb|CAH37159.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|52427698|gb|AAU48291.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344]
 gi|76579850|gb|ABA49325.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b]
 gi|83653727|gb|ABC37790.1| ABC transporter, permease protein [Burkholderia thailandensis E264]
 gi|121230312|gb|ABM52830.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|124294312|gb|ABN03581.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229]
 gi|126220945|gb|ABN84451.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126225207|gb|ABN88747.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|126243535|gb|ABO06628.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247]
 gi|134245408|gb|EBA45501.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|147747213|gb|EDK54289.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei FMH]
 gi|147752203|gb|EDK59269.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei JHU]
 gi|148026350|gb|EDK84435.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei 2002721280]
 gi|157810484|gb|EDO87654.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|157938045|gb|EDO93715.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160696286|gb|EDP86256.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399]
 gi|169655168|gb|EDS87861.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184210945|gb|EDU07988.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|217392216|gb|EEC32241.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|225929800|gb|EEH25816.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237505137|gb|ACQ97455.1| ABC transporter, permease protein [Burkholderia pseudomallei
           MSHR346]
 gi|238522557|gb|EEP86001.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4]
 gi|242141183|gb|EES27585.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|243061712|gb|EES43898.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           mallei PRL-20]
 gi|254217571|gb|EET06955.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 255

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   V+                   + +Q++++G     
Sbjct: 1   MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +   ++G  +V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G+IK+     A+  +A+ +G+        +    T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|284039999|ref|YP_003389929.1| hypothetical protein Slin_5158 [Spirosoma linguale DSM 74]
 gi|283819292|gb|ADB41130.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74]
          Length = 243

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G      G    +  K   +L  +I +   +GV  + +V L++   GAV   Q A+ L+
Sbjct: 4   IGSYFLFLGTLFRNREKLSVYLGLIINECTSIGVGSIFIVALVNIFIGAVTCVQTAYNLT 63

Query: 192 QFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 + I L+     + E+   L+ +++AG+ GS I +E+G+M+I E++DA+  MG++
Sbjct: 64  NPFVPKYIIALIVRDSSILELAPTLSCIVLAGKVGSNIASELGTMRITEQVDALEVMGIN 123

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P++ A ++  PLL I+A F AI+G  I       I    + +          +
Sbjct: 124 SSSYLILPKVIASVLMFPLLVIMAAFLAILGGYIAGTLAGVISAEEYVTGLRFDYKPFGV 183

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
              LIK    A  I  ++  +G+ V   +  +G   T+ V  S   ++  D +      
Sbjct: 184 AFALIKTVVFAFLISTISAFQGYNVSGGALEVGAASTSAVTNSCIAIVAADFVLTQLLL 242


>gi|303236789|ref|ZP_07323368.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302482957|gb|EFL45973.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 248

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G  +   G   +   +F+ FL   +++M  +GV  + +V+LISF  GAVI  
Sbjct: 3   IINWLTNFGKYLLLMGRTFSRPERFRMFLKQYVKEMSQLGVDSIGIVLLISFFIGAVICI 62

Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +      ++    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 63  QIKLNVQSPWMPLWVSGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  LI  +P L I +    I+GA    +  + I      S    
Sbjct: 123 LEIMGINSASYLILPKIAGLITIMPFLVIFSAAMGIVGAYATAYFAHIITPVDLTSGLQH 182

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           +     ++  ++K+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D  
Sbjct: 183 SFNSWFMYMSIMKSLFFAFIIASVSSYFGYTVKGGSFDVGKSSTDAVVSSSVLILFSDVF 242

Query: 364 FAIFYF 369
                 
Sbjct: 243 LTQLLS 248


>gi|241758953|ref|ZP_04757065.1| ABC transport inner membrane subunit [Neisseria flavescens SK114]
 gi|241320774|gb|EER57007.1| ABC transport inner membrane subunit [Neisseria flavescens SK114]
          Length = 258

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +     +  A S          IRQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARPRLSIRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  ++  +   +F
Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVEWLGLDGGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T   ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFMLTAWMF 256


>gi|301155764|emb|CBW15232.1| predicted toluene transporter subunit: membrane component of ABC
           superfamily [Haemophilus parainfluenzae T3T1]
          Length = 261

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 1/256 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             LG              + +     L++Q+Y +GV  + +++L    
Sbjct: 6   ISSLGRSVIKFFRALGRSGFMLFGALVGKPQIRKHFPLLVKQLYALGVQSLLIILLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +I++P+L IL     I G S+V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAILFTAIGIWGGSLVGVDWKGVDAGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +  + + +I  G IK+ F A A+  +A+  G+     S  + +  T  VV +  +
Sbjct: 186 WSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFAIG 372
           V+ +D +     F  G
Sbjct: 246 VLGLDFILTAIMFGAG 261


>gi|330888613|gb|EGH21274.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. mori str.
           301020]
          Length = 230

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 126/219 (57%), Gaps = 1/219 (0%)

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
              L+RQ+Y VGV  + ++++     G V+A QG   L+++G+E     ++++  LRE+G
Sbjct: 10  FQLLVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELG 69

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA++ AGR+GSA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L +
Sbjct: 70  PVVTALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAM 129

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331
           + +   + GAS V   +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +
Sbjct: 130 IFSVVGVWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQ 189

Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 190 GYDCDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 228


>gi|296114211|ref|ZP_06832866.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979287|gb|EFG86010.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC
           23769]
          Length = 261

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 118/253 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I            + G V        +   +   +  +    +  +G   +PVV L +  
Sbjct: 8   IAGIGRTLLDMVRMAGQVALFGLLAVSHLVRPPFYWRTFCGSLIEIGYFSLPVVALTALF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+A+ AEIG+M++
Sbjct: 68  SGGVIALQSYTGFAQYHAQSAIAGIVILAVTRELGPVLAGLMVAGRVGAAMSAEIGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
             +IDA+ T+  + ++ L++PR+ A  ++LP L I+A+   ++G  IV     +     +
Sbjct: 128 TNQIDALSTLSTNPIKYLVTPRLLAGTLALPFLVIIADILGVMGGFIVCVMKLNFVPQAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            S   ++  + ++  GL KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 ISATIASFRMMDVTVGLAKAAIFGFLIALMGCYHGYHSRGGAEGVGAATTAAVVAASILL 247

Query: 358 IIIDSLFAIFYFA 370
           +  D L    +F+
Sbjct: 248 LTFDYLLTDVFFS 260


>gi|311277833|ref|YP_003940064.1| hypothetical protein Entcl_0502 [Enterobacter cloacae SCF1]
 gi|308747028|gb|ADO46780.1| protein of unknown function DUF140 [Enterobacter cloacae SCF1]
          Length = 260

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTTAAFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV S  
Sbjct: 185 FWTAMQNAVEWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|237730114|ref|ZP_04560595.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908720|gb|EEH94638.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 260

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     LIRQ+Y VGV  + ++I+   
Sbjct: 5   ALASLGHRGIKTLRTFGRAGLMLFNAVVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|299065474|emb|CBJ36643.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum CMR15]
          Length = 255

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG           +          L+ Q+ ++G     ++ +     G V+  
Sbjct: 9   VRVLISRLGYATRMLLALLGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGLFVGFVLGL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+
Sbjct: 69  QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +  +++PR W   I++PLL  + +   I+G   V      +    F+S+  + 
Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGLIGVDAGAFWSQMQAG 188

Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + ++  G+IK+     A+  VA+ +G+        + +  T  VV +   V+ +D +
Sbjct: 189 VDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASLAVLALDFV 248

Query: 364 FAIFYFA 370
                F+
Sbjct: 249 LTALMFS 255


>gi|303270959|ref|XP_003054841.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
 gi|226462815|gb|EEH60093.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
          Length = 251

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 110/226 (48%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
              ++ K  +   I+Q+  VG   + V +L S   G V   Q   + S+ G       L+
Sbjct: 26  RVVWQRKLNMAQTIQQIARVGPDTLGVAMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLL 85

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
            +   RE+  ++ A+++AGR GSAI AE+G+M+++E++D +RT+G D V  L++PR+ A 
Sbjct: 86  GLAFTRELTPVICAIVLAGRVGSAIAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVAC 145

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
            +SLP+L++++    +  + ++    Y I               ++I    +K       
Sbjct: 146 ALSLPILSVVSFTIGMAASILLADLRYGISPNAIVDSAAKYLETSDIGVMCVKGLAFGGV 205

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           I  ++   G      +  +G+  T  VV S+  + ++D   ++ +F
Sbjct: 206 IATISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMIFF 251


>gi|260220241|emb|CBA27582.1| UPF0393 membrane protein HI1086 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 260

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             +G  +   + D  + A ++G ++++ G         +        Q++++G   + ++
Sbjct: 7   AELGFAVRSKLADWGAGARLMGRLVASLGAVLRRPALLR-------DQIHFMGNYSLAII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V+  Q  + L +FGA      L+S+  +RE G +LTA++ AGR+G+++ AE
Sbjct: 60  AVSGVFVGFVMGLQYYYGLQRFGAADSVGMLISLSLVREFGPVLTALLFAGRAGTSLTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG MK  E++ A+  M +D V  +++PR W  +I++P+L  + +   ++G  IV      
Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVSRILAPRFWGAVIAMPILAAVFSAVGVLGGWIVSVPMIG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           I    F+S+  S   +  ++  G+IK+     A+  +A+ +GF        + +  T  V
Sbjct: 180 IDSGAFWSQMQSGVDVWVDVGNGVIKSVVFGFAVSFIALLQGFEAQPTPEGVARATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D +     F+I
Sbjct: 240 VVASLTVLALDFVLTAMMFSI 260


>gi|238023142|ref|ZP_04603568.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147]
 gi|237865525|gb|EEP66665.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147]
          Length = 257

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +    LG       +      +        IRQMY+ GV  V ++ +    
Sbjct: 4   IQSTGAKTLAFIQTLGANALFLLKILLLLPQTLLRARLTIRQMYFSGVLSVLIIAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G VI  QG  QL++F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA ++S+PLL  + N + I G  +V  ++  +   VF
Sbjct: 124 TEQLEAMDVMAVNPVARVVAPRFWAGVVSMPLLACIFNVAGIYGGYLVGVQWLGLDTGVF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +    + ++F GL K+     A+ ++A+ +GF     +  + +  T  VV S   
Sbjct: 184 WSNMQNNIDWSYDVFNGLTKSLIFGSAVALIAVYQGFHCTPTAEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           V+ +D +   F F
Sbjct: 244 VLALDFILTAFMF 256


>gi|308814916|dbj|BAJ22980.1| L-glutamate ABC transporter [Neisseria meningitidis]
          Length = 258

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGMF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGIVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|161869245|ref|YP_001598412.1| putative ABC transport system permease protein [Neisseria
           meningitidis 053442]
 gi|304388521|ref|ZP_07370624.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Neisseria meningitidis ATCC 13091]
 gi|161594798|gb|ABX72458.1| putative ABC transport system permease protein [Neisseria
           meningitidis 053442]
 gi|304337518|gb|EFM03684.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Neisseria meningitidis ATCC 13091]
          Length = 258

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGARTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|290476800|ref|YP_003469711.1| putative ABC transporter membrane protein [Xenorhabdus bovienii
           SS-2004]
 gi|289176144|emb|CBJ82949.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus
           bovienii SS-2004]
          Length = 262

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +   A   G              +       L +Q+Y VGV  + ++++  
Sbjct: 6   RALAALGKRAIEVAASFGRAGFMLFSAIIGKPELAKQWKLLCQQLYSVGVQSLLIIVVSG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V++ QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 66  LFIGMVLSLQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +I+PR WA  IS+PLL+++     IIG +IV   +  I   
Sbjct: 126 KATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDAG 185

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++    +K+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 186 FFWSSMQSAVDWQKDLLNCFLKSVAFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 246 LAVLGLDFVLTALMFG 261


>gi|134096234|ref|YP_001101309.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans]
 gi|133740137|emb|CAL63188.1| ABC transporter, permease protein [Herminiimonas arsenicoxydans]
          Length = 259

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 133/265 (50%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   IG+ + +F+ +      I   +I  +G               +I Q++++G  
Sbjct: 2   IAAVLTAIGRGVREFVTNLGFATRIFFKIIGVSGGLLRRPQ-------LVISQIHFIGNY 54

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+
Sbjct: 55  SLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 114

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           ++ AEIG MK  E++ A+  M ++ ++ +++PR WA ++++P+L  + +   IIG  IV 
Sbjct: 115 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVVAMPVLAAIFSAIGIIGGYIVG 174

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            K   +    F+S+      +  ++  G+IK+     A+  VA+ +G+        + + 
Sbjct: 175 VKMIGVDEGAFWSQMQGGVDVWDDVLNGVIKSVVFGFAVTFVALYQGYQAQPTPEGVARA 234

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            T  VV +   V+ +D L     F+
Sbjct: 235 TTRTVVIASLSVLWLDFLLTALMFS 259


>gi|298369697|ref|ZP_06981014.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282254|gb|EFI23742.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 258

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +          S          IRQ+Y+ GV  V ++ +    
Sbjct: 4   IRTVGAKTLDFIQSLGSITLFLLRILTKSATAFTRPRLSIRQVYFSGVMSVLIIAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M +D V  +++PR WA + S+PLL  + N + I GA +V  ++  +   +F
Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQWLGLDGGIF 183

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +++  +  +   ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WAQMQNNISFGYDVANGLIKSAAFGTAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFVLTAWMF 256


>gi|261415153|ref|YP_003248836.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371609|gb|ACX74354.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325884|gb|ADL25085.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 260

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 67/248 (27%), Positives = 114/248 (45%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                     +G  I                   ++++M  VGVS +P++ + S  TG V
Sbjct: 12  GQKIVDAIAAVGECICILFITLKQFRYVHKNPSLIVKEMISVGVSSLPLLFVTSIFTGMV 71

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
                 F+     ++ F       + L E+G LLTA++++GR GSA+ AE+GSMK  EE+
Sbjct: 72  ATIMAEFEFHNLVSDKFVGTAACKMVLIELGPLLTAIVLSGRVGSAVAAELGSMKEKEEL 131

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A   +GLD  R L  PR +A +  +P LT ++N  A+IG  IV     DI    + +  
Sbjct: 132 SAYVVLGLDPYRYLAMPRFFAFLTMIPCLTAISNALALIGGWIVCVLALDITTYTYSTGM 191

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               +  +++ G+IK+      I ++A   G      ++ +G    + VV S  ++++ D
Sbjct: 192 QYLFSNMDLWAGIIKSIVFGTIIFVLAYYHGTHSKPGAHGVGLATMSVVVASCLMILVSD 251

Query: 362 SLFAIFYF 369
            +   F F
Sbjct: 252 FILDAFMF 259


>gi|171462919|ref|YP_001797032.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192457|gb|ACB43418.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 262

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 5/259 (1%)

Query: 117 KIVKFINDSCSQ----AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            ++    D           LGL           S         +I Q+ +VG     ++ 
Sbjct: 3   ALLNLFGDLGFFIRRNLSSLGLAARMLVAVVFRSGFLLKRPRLVIDQILFVGNHSFVIIA 62

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+++ AEI
Sbjct: 63  VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAGTSLTAEI 122

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G MK  E++ A+  M +D +  +I+PR+WA IIS+P+L  +     I+G  +V      +
Sbjct: 123 GLMKAGEQLTAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGILGGYLVGVPLIGV 182

Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+        ++   GLIK+     A+  +A+ +G+        + +  T  VV
Sbjct: 183 DSGAFWSQMQGGVDLFSDTGNGLIKSMVYGVAVTFIALYQGYESRPTPEGVSQATTRTVV 242

Query: 352 QSISIVIIIDSLFAIFYFA 370
            S   V+ +D L     F+
Sbjct: 243 ISSLSVLALDFLLTAMMFS 261


>gi|16762074|ref|NP_457691.1| hypothetical protein STY3491 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766607|ref|NP_462222.1| transport protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143563|ref|NP_806905.1| hypothetical protein t3229 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56415241|ref|YP_152316.1| hypothetical protein SPA3179 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62181820|ref|YP_218237.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161616322|ref|YP_001590287.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552038|ref|ZP_02345791.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167994505|ref|ZP_02575596.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231923|ref|ZP_02656981.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168238014|ref|ZP_02663072.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168243148|ref|ZP_02668080.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168262675|ref|ZP_02684648.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168463462|ref|ZP_02697379.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168819618|ref|ZP_02831618.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194443328|ref|YP_002042570.1| toluene ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194449369|ref|YP_002047341.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470890|ref|ZP_03076874.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737604|ref|YP_002116262.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251770|ref|YP_002148237.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262344|ref|ZP_03162418.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197364171|ref|YP_002143808.1| hypothetical protein SSPA2967 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|200388463|ref|ZP_03215075.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204931189|ref|ZP_03221983.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205354213|ref|YP_002228014.1| hypothetical protein SG3202 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858560|ref|YP_002245211.1| hypothetical protein SEN3145 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213163395|ref|ZP_03349105.1| hypothetical protein Salmoneentericaenterica_26575 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213420406|ref|ZP_03353472.1| hypothetical protein Salmonentericaenterica_22736 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213426645|ref|ZP_03359395.1| hypothetical protein SentesTyphi_14148 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213618602|ref|ZP_03372428.1| hypothetical protein SentesTyp_19883 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646981|ref|ZP_03377034.1| hypothetical protein SentesTy_06536 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857745|ref|ZP_03384716.1| hypothetical protein SentesT_21720 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224585109|ref|YP_002638908.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910106|ref|ZP_04653943.1| hypothetical protein SentesTe_03070 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825822|ref|ZP_06544990.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25319166|pir||AG0904 probable membrane protein STY3491 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16421869|gb|AAL22181.1| putative ABC superfamily transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16504377|emb|CAD07829.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139198|gb|AAO70765.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129498|gb|AAV79004.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129453|gb|AAX67156.1| putative ABC superfamily (membr) transport protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365686|gb|ABX69454.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401991|gb|ACF62213.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194407673|gb|ACF67892.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194457254|gb|EDX46093.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194713106|gb|ACF92327.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195633368|gb|EDX51782.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197095648|emb|CAR61216.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197215473|gb|ACH52870.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197240599|gb|EDY23219.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289146|gb|EDY28515.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|199605561|gb|EDZ04106.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204319956|gb|EDZ05162.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205273994|emb|CAR39000.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323252|gb|EDZ11091.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205327645|gb|EDZ14409.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333943|gb|EDZ20707.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205337808|gb|EDZ24572.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205343404|gb|EDZ30168.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205348318|gb|EDZ34949.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206710363|emb|CAR34721.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224469637|gb|ACN47467.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248477|emb|CBG26314.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995511|gb|ACY90396.1| putative transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159861|emb|CBW19380.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914339|dbj|BAJ38313.1| toluene ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320087757|emb|CBY97521.1| UPF0393 inner membrane protein yrbE [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225264|gb|EFX50323.1| Uncharacterized ABC transporter, permease component YrbE
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322615316|gb|EFY12237.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322618325|gb|EFY15216.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622870|gb|EFY19714.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626808|gb|EFY23605.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631377|gb|EFY28137.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322635356|gb|EFY32070.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322643355|gb|EFY39919.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322647073|gb|EFY43574.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648876|gb|EFY45321.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655068|gb|EFY51379.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322657671|gb|EFY53939.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664167|gb|EFY60365.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322667450|gb|EFY63612.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674698|gb|EFY70790.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322675669|gb|EFY71742.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682305|gb|EFY78328.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684908|gb|EFY80906.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322716309|gb|EFZ07880.1| putative phospholipid ABC transporter permease protein mlaE
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131672|gb|ADX19102.1| putative transport protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195887|gb|EFZ81058.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199004|gb|EFZ84101.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204296|gb|EFZ89305.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323207643|gb|EFZ92590.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211304|gb|EFZ96148.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214754|gb|EFZ99503.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221234|gb|EGA05660.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224025|gb|EGA08318.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230326|gb|EGA14445.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233302|gb|EGA17396.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239339|gb|EGA23389.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242410|gb|EGA26436.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246920|gb|EGA30886.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323254147|gb|EGA37967.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323255264|gb|EGA39041.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323262727|gb|EGA46283.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264037|gb|EGA47545.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323269423|gb|EGA52878.1| toluene transporter subunit: membrane component of ABC superfamily
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326625062|gb|EGE31407.1| putative phospholipid ABC transporter permease protein mlaE
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|326629335|gb|EGE35678.1| Putative membrane protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 260

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|167587707|ref|ZP_02380095.1| hypothetical protein BuboB_20349 [Burkholderia ubonensis Bu]
          Length = 255

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +   A +   ++                   + +Q++++G     
Sbjct: 1   MISAIGRFVIGGLVRAGYGARMFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+W  II++PLL  + N   ++G   V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWGGIITMPLLAAIFNAVGVLGGYFVGVIL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        + +  T 
Sbjct: 174 IGVDSGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255


>gi|86606727|ref|YP_475490.1| hypothetical protein CYA_2087 [Synechococcus sp. JA-3-3Ab]
 gi|86555269|gb|ABD00227.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 255

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 117/236 (49%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G      G+      + +    + + Q+  VG+  + +V++ + V   V   Q A +  
Sbjct: 7   VGSSFLLAGQVTLHLLRGRIHRRNTLEQLAAVGLESLLIVLITAVVISGVFTIQLAREFI 66

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
            FGA      +++I   RE+  ++TAV++AGR GSA  AE+G+MK+ E+IDA+  +  D 
Sbjct: 67  NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALYLLRTDP 126

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  + LP+LTIL+  + ++G  I+    Y+IP  VF +   +     ++ 
Sbjct: 127 VDYLVIPRVVAAGLMLPVLTILSLLTGLVGGMIICASVYNIPSTVFLTSAQNLLAPWDLI 186

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +KA      I IV    G +    +  +G+  T  VV ++  V + + L +  
Sbjct: 187 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWL 242


>gi|296135334|ref|YP_003642576.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
 gi|295795456|gb|ADG30246.1| protein of unknown function DUF140 [Thiomonas intermedia K12]
          Length = 261

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++V     +      LG              +       LI+QMY++G   + ++ +   
Sbjct: 6   RLVSIGVGTRQLLSSLGYAARLFVRLLWLVGRVFMRPSLLIQQMYFLGNLSLVIIAVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG + LS++G+      L+++  +RE+G ++TA++ AGR+G+++ AEIG MK
Sbjct: 66  FVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E+I A+  M +D V  +++PR WA +I +PLL  + +   I+G  +V      +    
Sbjct: 126 AGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVGVVMIGVDAGQ 185

Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+  S      ++  G+IK+     A+  VA+ +G+        + +  T  VV +  
Sbjct: 186 FWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRATTRTVVIASL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F+
Sbjct: 246 AVLALDFVLTAMMFS 260


>gi|269137863|ref|YP_003294563.1| putative transport protein [Edwardsiella tarda EIB202]
 gi|267983523|gb|ACY83352.1| putative transport protein [Edwardsiella tarda EIB202]
 gi|304557916|gb|ADM40580.1| hypothetical protein ETAF_0456 [Edwardsiella tarda FL6-60]
          Length = 260

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +  F           G              +       L RQ+Y VGV  + ++I+   
Sbjct: 5   GLAAFGRRGIRVCAAFGRAGLMLFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK
Sbjct: 65  FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +++PR WA +IS+PLLT++     I G S+V   +  I    
Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGF 184

Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S          ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|269128543|ref|YP_003301913.1| hypothetical protein Tcur_4348 [Thermomonospora curvata DSM 43183]
 gi|268313501|gb|ACY99875.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 285

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 111/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G   +   +   + +K        I Q +++        +L++   GA+++ Q    + Q
Sbjct: 41  GRFFALCLDAFRAMFKRPLQWREFIEQAWFIVSVTAIPTMLVAIPFGAILSLQVGGLIRQ 100

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +RE   L+TA++IAG +GSA+ A+IGS KI EEIDA+  +G++ +
Sbjct: 101 LGAQSFTGATAVVAIVREASPLVTALLIAGAAGSAMCADIGSRKIREEIDAMEVLGINPL 160

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+WA       L  L +   ++G         D     + + F++ A L ++  
Sbjct: 161 HRLVVPRMWACAFIGLFLNGLVSVVGLVGGYFFNVVLQDGTPGAYLASFNAMAQLPDLIQ 220

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             +KA       G+VA  +G         +G  V   VV +  ++ + + + +  YF +
Sbjct: 221 AEVKAFIFGLTAGLVAAYKGLNAKGGPKGVGDAVNQTVVITFMLLFVENFVISALYFQL 279


>gi|294669772|ref|ZP_06734838.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308338|gb|EFE49581.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 258

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG V     +  A S          +RQ+Y+ GV  V ++ +    
Sbjct: 4   IRTVGAKTLGFIQALGSVCLFLLQILAHSGTSLLRFRLSVRQVYFAGVLSVLIIAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKA 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V  ++  +   +F
Sbjct: 124 TEQLEAMNVMAINPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQWLGLDGGIF 183

Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  +   ++  GLIK+ F   A+ ++A+ +GF     S  + +  T  VV S  +
Sbjct: 184 WSQMQNNISFGYDVLNGLIKSAFFGVAVTLIAVHQGFHALPTSEGILRASTRTVVSSALV 243

Query: 357 VIIIDSLFAIFYF 369
           V+ ID +   F F
Sbjct: 244 VLAIDFILTAFMF 256


>gi|33240854|ref|NP_875796.1| putative transporter, membrane component [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
 gi|33238383|gb|AAQ00449.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 248

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 112/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+   S+ K +     LI Q+   G +   +V++     G V   Q A +LS
Sbjct: 10  LGSSCIIGGQAVTSTTKGRFNKADLIDQLMEAGPASFLIVLITGVSAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G       L++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGLGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLKTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  PL  +L    A+    +    +Y IP  VF++       L ++ 
Sbjct: 130 VEYLVVPRLIAMVVMAPLQCLLFFSVALWSGQVSSTAFYSIPPNVFWNSVKEWIVLTDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I ++A   G      +  +G   T  VV ++  V ++D +     F+
Sbjct: 190 FMLIKAVVFGLQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLTVSLMDVVLTKVLFS 248


>gi|332178184|gb|AEE13873.1| protein of unknown function DUF140 [Thermodesulfobium narugense DSM
           14796]
          Length = 250

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 120/246 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G +         +    +      + Q + +GV  VP+V + S   G V A 
Sbjct: 4   FIEFFSDVGQLSYLFFRSIVAVLTARFRFFLFLDQCFMIGVESVPIVFITSLFVGMVFAI 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A +   +GA      ++ I  +RE+G ++T V++AGR GSA+ AEIG+MK+ E+IDA+
Sbjct: 64  QTAREFVFYGAGSVVGGVVGIAIIRELGPMITGVVVAGRVGSAMAAEIGTMKVTEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            +M +D +  L++PR++A ++ LPLLT++AN + +IG   V   Y  +  + F       
Sbjct: 124 LSMSVDPIFYLVAPRVFACMLMLPLLTVIANLAGVIGGYFVAVYYGGVIPSSFVESVRFL 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + +I   LIKA      I ++    G      +  +G      VV S+ ++ I +   
Sbjct: 184 VKVWDIEASLIKAMIFGSIISLIGTFIGLRTKAGARGVGNSTMLSVVISLILIFIFNYFL 243

Query: 365 AIFYFA 370
           ++  F+
Sbjct: 244 SMVMFS 249


>gi|329957353|ref|ZP_08297873.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT
           12056]
 gi|328523066|gb|EGF50169.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT
           12056]
          Length = 247

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|78213612|ref|YP_382391.1| hypothetical protein Syncc9605_2096 [Synechococcus sp. CC9605]
 gi|78198071|gb|ABB35836.1| Protein of unknown function DUF140 [Synechococcus sp. CC9605]
          Length = 249

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 115/239 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +     L+ Q+   G   V +V++IS   G+V   Q A +L+
Sbjct: 10  LGASLLIGGQAVAATLRGRIDRGELLEQLLDAGPGSVLIVLIISVAAGSVFNIQVAAELT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      +++I   REI  LLT+ ++AG+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+        A+    +     Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLVAVWSGQLTSTALYNIPPAVFWTSVRTWMAPLDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I  VA   G         +G   T  VV  + +V ++D +     F 
Sbjct: 190 FMLVKAVVFGMIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248


>gi|300724964|ref|YP_003714289.1| putative ABC transporter membrane protein [Xenorhabdus nematophila
           ATCC 19061]
 gi|297631506|emb|CBJ92213.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus
           nematophila ATCC 19061]
          Length = 262

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +      +       G              +     L L +Q+Y VGV  + ++++  
Sbjct: 6   RALAVLGRRAIEVTASFGRAGFMLFSAIIGKPEPAKQWLLLRQQLYSVGVQSLLIIVVSG 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG M
Sbjct: 66  LFIGMVLALQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E+I ++  M +D +R +++PR WA  IS+PLLT++     I+G +IV   +  I   
Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGILGGAIVGVDWKGIDAG 185

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S   S      ++    +K+   A  +  +A+  G+     S  + +  T  VV + 
Sbjct: 186 FFWSSMQSAVEWKKDLLNCFLKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 246 LAVLGLDFVLTALMFG 261


>gi|261378129|ref|ZP_05982702.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           cinerea ATCC 14685]
 gi|269145589|gb|EEZ72007.1| toluene tolerance ABC efflux transporter, permease [Neisseria
           cinerea ATCC 14685]
          Length = 258

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      LG +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRPCLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ ID +   + F
Sbjct: 244 ILAIDFVLTAWMF 256


>gi|162146934|ref|YP_001601395.1| hypothetical protein GDI_1139 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209543998|ref|YP_002276227.1| hypothetical protein Gdia_1852 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785511|emb|CAP55082.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531675|gb|ACI51612.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 261

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 118/253 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      + +     G +     +  +   +   +       +  +G   +PVV L +  
Sbjct: 8   IAALGRAALNLVRTAGALTLFGAQALSHLVRPPFYWRIFFGALVEIGFFSLPVVALTALF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G VIA Q     +Q+  +     ++ +   RE+G +L  +M+AGR G+A+ AEIG+M++
Sbjct: 68  SGGVIALQSYTGFAQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAEIGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  + ++ L++PR+ A  ++LP L ++A+   ++G   V     D    V+
Sbjct: 128 TDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVLGGFTVSVAKLDFSAPVY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +   +     ++  GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 IAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGAATTAAVVAASILL 247

Query: 358 IIIDSLFAIFYFA 370
           +  D L    +F+
Sbjct: 248 LASDYLLTDVFFS 260


>gi|325104961|ref|YP_004274615.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
 gi|324973809|gb|ADY52793.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145]
          Length = 244

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G  I           KF  +   + ++M Y+G+  + ++ +IS   GAV+  Q A
Sbjct: 2   FFSYFGKYILLLKAVFRKPEKFSLYWKEIAKEMVYIGIGSLALISIISVFVGAVMTLQIA 61

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           FQL S F  +     +     + E+   + A+++AG+ GS+I +EIG+M++ E+IDA+  
Sbjct: 62  FQLVSDFIPKTIVGSVNRDSAILELSPTICALVLAGKIGSSISSEIGTMRVTEQIDALEI 121

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A I  +P+L  ++ F A++G  +       +  + +     +   
Sbjct: 122 MGINAPGYLILPKIIAGITMIPILVYISIFLALLGGYVGGVASGVVSSSDYIQGITTGFI 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +    +KA      I  VA  +GF V   +  +GK  T  VV S   ++  D +   
Sbjct: 182 PYTMAVAGVKAFIFGFIITSVASYQGFYVNGGALEVGKAGTKTVVISCIAILSADYIITE 241

Query: 367 F 367
            
Sbjct: 242 L 242


>gi|17547680|ref|NP_521082.1| hypothetical protein RSc2961 [Ralstonia solanacearum GMI1000]
 gi|17429984|emb|CAD16668.1| putative abc-type transport system involved in resistance to
           organic solvents, permease component abc transporter
           protein [Ralstonia solanacearum GMI1000]
          Length = 255

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG           +          L+ Q+ ++G     ++ +     G V+  
Sbjct: 9   VRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGLFVGFVLGL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+
Sbjct: 69  QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +  +++PR W   I++PLL  + +   I+G   V      +    F+S+  + 
Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDAGAFWSQMQAG 188

Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + ++  G+IK+     A+  VA+ +G+        + +  T  VV +   V+ +D +
Sbjct: 189 VDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASLAVLALDFV 248

Query: 364 FAIFYFA 370
                F+
Sbjct: 249 LTALMFS 255


>gi|218128442|ref|ZP_03457246.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697]
 gi|317475731|ref|ZP_07934990.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217989333|gb|EEC55646.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697]
 gi|316908114|gb|EFV29809.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 247

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGKYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|307150966|ref|YP_003886350.1| hypothetical protein Cyan7822_1067 [Cyanothece sp. PCC 7822]
 gi|306981194|gb|ADN13075.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822]
          Length = 266

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 1/238 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   I  TG      +  K    + + QM  VG + + + ++ + V G +   Q A +  
Sbjct: 18  LWAAILLTGRVVFYLFTRKIDARNTLEQMMAVGPASLAIALITATVIGMIFTIQVAREFL 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA      ++++   RE+  ++ AV++AGR GSA  AEIG+M++ E+IDA+  +  D 
Sbjct: 78  ALGAGSAVGGILALALSRELCPIMMAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLNADP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  I +P LT+LA  + + G  ++I  Y      VF     +   + ++ 
Sbjct: 138 VEYLVIPRVVACCIMVPALTVLALITGLAGGLLMIRFYGIAD-TVFLESIQNFVRVWDVI 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            G IK     C I I+    G      +  +G+  T  VV  +  + I + + +   F
Sbjct: 197 CGPIKGIVFGCLIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFIANFILSWIMF 254


>gi|148240268|ref|YP_001225655.1| ABC-type transport system, permease component [Synechococcus sp. WH
           7803]
 gi|147848807|emb|CAK24358.1| ABC-type transport system, permease component [Synechococcus sp. WH
           7803]
          Length = 257

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 112/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L+ Q+   G     +VI+ S   G V   Q   +LS
Sbjct: 19  LGSSLIIGGQAVTATARGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELS 78

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA+     ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 79  SMGADATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 138

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    AI  A I   + Y IP  VF+    S     +I 
Sbjct: 139 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTELYAIPPEVFWMSVRSWLLPDDIP 198

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I +++   G         +G   T  VV  +  V ++D++     F 
Sbjct: 199 FMLIKALVFGLQIAVLSCGWGMTTQGGPKEVGTSTTGAVVMILVTVALMDTVLTQILFG 257


>gi|167765445|ref|ZP_02437558.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC
           43183]
 gi|167697073|gb|EDS13652.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC
           43183]
          Length = 247

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIILMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G++V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYSVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|110680422|ref|YP_683429.1| hypothetical protein RD1_3241 [Roseobacter denitrificans OCh 114]
 gi|109456538|gb|ABG32743.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 257

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 107/250 (42%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                S    +G +    G+      +   +      Q+  +G   +PVV L +  TG  
Sbjct: 8   GRVVLSALAAIGRIAIFGGQTIGHLARPPFYAREFATQLLNIGWLSLPVVGLTAVFTGGA 67

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q     S+F AE     ++++  +RE+G +L  +MIA R  S+I AEI +MK+ E+I
Sbjct: 68  LALQIYAGGSRFNAEAVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 127

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+    ++ L  PR+ A ++ +PLL  + +   I G   V         A + +  
Sbjct: 128 DALVTLSTHPMKYLTVPRVLAAVLVVPLLVAVGDIIGIFGGFAVATGTLGFNAATYINNT 187

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +     ++ + L K         ++    G   G  +  +G+     V  +  +++  +
Sbjct: 188 VNFLEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAVLILAAN 247

Query: 362 SLFAIFYFAI 371
            +    +F +
Sbjct: 248 FVLTGVFFTL 257


>gi|198242766|ref|YP_002217283.1| toluene ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197937282|gb|ACH74615.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
          Length = 260

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G S+V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWSVMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|297172194|gb|ADI23174.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [uncultured gamma
           proteobacterium HF0770_11A05]
          Length = 220

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/217 (29%), Positives = 113/217 (52%)

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
           + Q++++GV    VV+L    TG V+  Q   Q  +   +   + + ++   RE+G + T
Sbjct: 1   MEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVXTVXMXRELGAVXT 60

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            +MIAGR G+A+ A++G+MK+ E+IDA+RT+    V  L++PR+ A++ISLPLLT  A  
Sbjct: 61  XLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIA 120

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            +++   +V      +     +S         +I+ GLIKA   A  I  VA  +G   G
Sbjct: 121 ISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSVDIWMGLIKAFIFAGIIATVACHKGMHCG 180

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
             +  +GK  T  VV +   +++ +    +    + I
Sbjct: 181 QGAEGVGKATTEAVVAASISILVSNFFVTLVLNNLLI 217


>gi|255014836|ref|ZP_05286962.1| ABC transporter permease [Bacteroides sp. 2_1_7]
          Length = 241

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G       +      ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +  +S
Sbjct: 1   MGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNIS 60

Query: 192 QFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    + A+++AG+ GS I +EIG+M++ E+IDA+  MG++
Sbjct: 61  SPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVN 120

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTATLAN 309
               LI P++  L+I +P+L I + F+ I+G     +     +  + F            
Sbjct: 121 SANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY 180

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +  
Sbjct: 181 IWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 236


>gi|224535957|ref|ZP_03676496.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522412|gb|EEF91517.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 247

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    I +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALKTVGRYIMLMGRTFARPERMRMFFRQYINEMGQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I+A++ ++P L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIFAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|194290964|ref|YP_002006871.1| hypothetical protein RALTA_A2885 [Cupriavidus taiwanensis LMG
           19424]
 gi|193224799|emb|CAQ70810.1| conserved hypothetical protein, DUF140; Putative abc-type
           transporter, membrane component [Cupriavidus taiwanensis
           LMG 19424]
          Length = 259

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 123/252 (48%), Gaps = 1/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       LG          A S         +  Q+++VG   + ++ +     G
Sbjct: 7   AIGAAVRRSISGLGHATRMFLAVLALSPALLRRFRLVTDQVFFVGNLSLVIIAVSGLFVG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  E
Sbjct: 67  FVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M ++ ++ +++PR WA +I++P+L  + +   I+G  +V  +   +    F+S
Sbjct: 127 QLTAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGILGGYVVGVQLIGVDAGAFWS 186

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +      +  ++  G+IK+     A+  +A+ +GF        + +  T  VV +   V+
Sbjct: 187 QMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEARPTPEGVSRATTRTVVIASLAVL 246

Query: 359 IIDSLFAIFYFA 370
            +D L     F+
Sbjct: 247 GLDFLLTALMFS 258


>gi|189463681|ref|ZP_03012466.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM
           17393]
 gi|189438631|gb|EDV07616.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM
           17393]
          Length = 247

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    + +M  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALKTVGRYIMLMGRTFARPERMRMFFRQYLNEMGQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++P L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKICAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|329913017|ref|ZP_08275865.1| putative transport protein (ABC superfamily, membrane)
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545454|gb|EGF30661.1| putative transport protein (ABC superfamily, membrane)
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 258

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I    +      + +G           +S         +  Q+++VG   + ++ +   
Sbjct: 4   WIAALGSRVTGFLYQIGYAARAFLAILRASAGLWRRPRLITDQIHFVGNYSLVIIAVSGL 63

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK
Sbjct: 64  FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK 123

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ A+  M +D ++ +++PR WA +I++P+L  + +   I+G  +V  +   I    
Sbjct: 124 AGEQLSAMEMMAVDPIQRVLAPRFWAGVIAMPVLAAIFSAVGIVGGYVVGVQMIGIDEGA 183

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+      +  +I  G++K+     A+  +A+ +G+        + +  T  VV    
Sbjct: 184 FWSQMQGGVDVWQDIANGVLKSFVFGIAVTFIALFQGYEAQPTPEGVARATTRTVVIGSL 243

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D L     F 
Sbjct: 244 TVLWLDFLMTALMFN 258


>gi|56417212|ref|YP_154286.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries]
 gi|222475576|ref|YP_002563993.1| hypothetical protein AMF_912 [Anaplasma marginale str. Florida]
 gi|254995379|ref|ZP_05277569.1| hypothetical protein AmarM_05554 [Anaplasma marginale str.
           Mississippi]
 gi|255003566|ref|ZP_05278530.1| hypothetical protein AmarPR_05019 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004692|ref|ZP_05279493.1| hypothetical protein AmarV_05379 [Anaplasma marginale str.
           Virginia]
 gi|56388444|gb|AAV87031.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries]
 gi|222419714|gb|ACM49737.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
          Length = 259

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 112/250 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       +G +     +  A       +     RQ + +    +P+V + +  TG
Sbjct: 10  AVGRYFIGLVVPVGRMSIFCAKSVALGALPPYYFPIAARQFFEMWFFSLPIVGMTALFTG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +  Q         A  F   ++++  +RE+G +L  +++AGR G+A+ AEIG+M+I E
Sbjct: 70  GALVLQDTLVGGGKVAAHFMAGIVTVAIVRELGPVLIGLIVAGRVGAAVAAEIGTMRITE 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+  D  + L++PR+ AL++++P+L I  +F  I G   V           +  
Sbjct: 130 QIDALDTLEADPFQYLVAPRVIALMVAMPVLIIYTDFLGIFGGYAVGTLGLGYNPNEYIG 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++  GL+KA      I +V    G+     +  +G   T  VV S  ++++
Sbjct: 190 GVAEFLRFKDVTEGLVKAVSFGFVIAMVGCYSGYYCSGGARGVGAATTNTVVSSSMLIVL 249

Query: 360 IDSLFAIFYF 369
           ++ +  +FY 
Sbjct: 250 LNYVITVFYA 259


>gi|319900088|ref|YP_004159816.1| hypothetical protein Bache_0200 [Bacteroides helcogenes P 36-108]
 gi|319415119|gb|ADV42230.1| protein of unknown function DUF140 [Bacteroides helcogenes P
           36-108]
          Length = 247

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIILMGRVFARPERMRMFFRQYLNEVEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I AL+ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKISALVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
           T     I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 TFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|73542805|ref|YP_297325.1| hypothetical protein Reut_A3121 [Ralstonia eutropha JMP134]
 gi|72120218|gb|AAZ62481.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134]
          Length = 258

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 124/252 (49%), Gaps = 1/252 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              +        LG            S         +  Q+++VG   + ++ +     G
Sbjct: 7   AIGSAVRQGVAGLGHAAGMFFTVLGLSPALLRRFRLVTDQIFFVGNLSLVIIAVSGLFVG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  E
Sbjct: 67  FVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVITALLFAGRAGTSLTAEIGLMKAGE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M ++ ++ +I+PR WA ++++P+L  + +   ++G  +V  +   +    F+S
Sbjct: 127 QLTAMEMMAVNPLQRVIAPRFWAGVVAMPVLAAIFSAVGVLGGYLVGVQLIGVDAGAFWS 186

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +  +   +  ++  G+IK+     A+  +A+ +GF        + +  T  VV +   V+
Sbjct: 187 QMQAGVDVRDDVVNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRATTRTVVIASLAVL 246

Query: 359 IIDSLFAIFYFA 370
            +D L     F+
Sbjct: 247 GLDFLLTALMFS 258


>gi|291613160|ref|YP_003523317.1| hypothetical protein Slit_0691 [Sideroxydans lithotrophicus ES-1]
 gi|291583272|gb|ADE10930.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus
           ES-1]
          Length = 262

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
           +  +    IGK++V  I  +   A    + +  +G                +R++++ GV
Sbjct: 2   AIVSGLRGIGKRVVNAIWRTGYGARFFLMTLLYSGMSFKR-------FRLTVREIFFSGV 54

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G V+  QG   L ++G+E     L+++  +RE+G +L A++ A R+G
Sbjct: 55  MSLIIILVAGMFVGMVLGLQGYETLKRYGSESALGSLVALSLVRELGPVLAALLFASRAG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I A+  M ++ +  +++PR WA +IS+PLL  L +   + G  +V
Sbjct: 115 SAMTAEIGLMKATEQISAMELMAVNPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYVV 174

Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+S+  ++     +I  G+IK+     A+  +A+ EG+     +  +  
Sbjct: 175 GVVNIGVDEGSFWSQMQASVDFQHDILNGVIKSLVFGLAVTAIALFEGYDAPPTAEGVSG 234

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV+S   ++++D +   F F 
Sbjct: 235 ATTRTVVESSLAILMLDFILTAFMFQ 260


>gi|145219305|ref|YP_001130014.1| hypothetical protein Cvib_0490 [Prosthecochloris vibrioformis DSM
           265]
 gi|145205469|gb|ABP36512.1| protein of unknown function DUF140 [Chlorobium phaeovibrioides DSM
           265]
          Length = 264

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 116/248 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +         +            +  K + +    + Q    G   +P+V++ +   G
Sbjct: 12  DLVYRLKDFFLTMQDFFLFGVRSFLTIPKIRRYWRDFLDQAKICGADSIPIVLVSAISIG 71

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           +++A +    L  FGA+       SI  +RE+G LL  +M++ R GS   AE+G+MKI+E
Sbjct: 72  SLLAIEVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKISE 131

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+R  G D +  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ +   +F++
Sbjct: 132 QIDALRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWN 191

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             +    L +   G  KAP  A  I +V+   GF+    +  +G+     +V S  +V+I
Sbjct: 192 SVYPRLALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTAGVGRSTIKGIVVSSGLVLI 251

Query: 360 IDSLFAIF 367
            +   +  
Sbjct: 252 ANFYVSKI 259


>gi|56476144|ref|YP_157733.1| organic solvent resistance ABC transporter permease [Aromatoleum
           aromaticum EbN1]
 gi|56312187|emb|CAI06832.1| predicted ABC-type transport system involved in resistance to
           organic solvents, permease component [Aromatoleum
           aromaticum EbN1]
          Length = 264

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/267 (23%), Positives = 129/267 (48%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            N    L   +G  +   +      A   GL++  +G+     +         IR++Y+ 
Sbjct: 1   MNGLLALVRRLGGAVTDAVWRLGFAARFFGLLLLYSGQSLLRVH-------LTIREVYFS 53

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V+  QG   L +FG+      L+++   RE+G ++ A++ A R
Sbjct: 54  GVLSLLIIVVSGLFVGMVLGLQGYETLQRFGSGDALGVLVALSLTRELGPVVAALLFASR 113

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSA+ AEIG MK  E++ A+  M ++ +  +++PR W  +IS+PLL  L +   + G  
Sbjct: 114 AGSAVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSAMGVFGGW 173

Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           ++      +    F+S+  +      ++  G+IK+     A+ ++A+ EG+     +  +
Sbjct: 174 LIGVVLIGVDEGAFWSQMQAAVDFRFDVVNGVIKSVVFGAAVSLIAVFEGYDCTPTAEGV 233

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + +T  VV S   ++ +D +   F F
Sbjct: 234 SRAITRTVVSSALAILALDFVLTSFMF 260


>gi|294339439|emb|CAZ87798.1| Toluene tolerance protein Ttg2B [Thiomonas sp. 3As]
          Length = 261

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++V     +      LG              +       LI+QMY++G   + ++ +   
Sbjct: 6   RLVSIGAGTRQLLSSLGYAARLFARLILLVGRVFMRPSLLIQQMYFLGNLSLVIIAVSGL 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG + LS++G+      L+++  +RE+G ++TA++ AGR+G+++ AEIG MK
Sbjct: 66  FVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E+I A+  M +D V  +++PR WA +I +PLL  + +   I+G  +V      +    
Sbjct: 126 AGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVGVVMIGVDAGQ 185

Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+  S      ++  G+IK+     A+  VA+ +G+        + +  T  VV +  
Sbjct: 186 FWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRATTRTVVIASL 245

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F+
Sbjct: 246 AVLALDFVLTAMMFS 260


>gi|160890565|ref|ZP_02071568.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492]
 gi|270295705|ref|ZP_06201905.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317479890|ref|ZP_07939007.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36]
 gi|156859564|gb|EDO52995.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492]
 gi|270273109|gb|EFA18971.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316903964|gb|EFV25801.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36]
          Length = 247

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   A   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MFKALKTVGRYIILMGRVFARPERMRMFFRQYVNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++ ++PL+   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTQLLMG 247


>gi|258541792|ref|YP_003187225.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256632870|dbj|BAH98845.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635927|dbj|BAI01896.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638982|dbj|BAI04944.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642036|dbj|BAI07991.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645091|dbj|BAI11039.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648146|dbj|BAI14087.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651199|dbj|BAI17133.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654190|dbj|BAI20117.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 261

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 118/253 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +    + S     G +        +   +   +    +      G   +PVV L +  
Sbjct: 8   VARLGRATLSLIRAAGALALFAASGLSHIVRPPFYGRVFLSTFLETGFFSLPVVALTALF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G VIA Q     +Q+ A+     ++ +   RE+G +L  +M+AGR G+A+ A+IG+M++
Sbjct: 68  SGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAQIGTMRV 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            ++IDA+ T+  + ++ L++PR+ A +I+LPLL ++A+   + G   V           +
Sbjct: 128 TDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAVVKLGFSAPAY 187

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            +   ++    ++  GL+KA      I ++    G+     +  +G   T  VV +  ++
Sbjct: 188 ITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAEGVGSATTAAVVAASIML 247

Query: 358 IIIDSLFAIFYFA 370
           +  D L    +F+
Sbjct: 248 LAFDYLLTDLFFS 260


>gi|318042383|ref|ZP_07974339.1| putative transporter, membrane component [Synechococcus sp. CB0101]
          Length = 261

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 109/239 (45%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+  A+  K +  +  L+ ++   G     +VI+     G V   Q A +L 
Sbjct: 22  LGESCLIGGQAMAALAKGQVGINDLMAELMEAGPGSFLIVIITGLAAGTVFNIQAASELV 81

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  +LTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 82  KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 141

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A++I  P+  +     A+    +     Y IP  VF++   +    +++ 
Sbjct: 142 VQYLVVPRVLAMLIMTPVQCLAFFAVAMWSGQVSSTLLYQIPPGVFWNSVRTWMEPSDLP 201

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I +++   G         +G   T  VV  +  V ++D +     F 
Sbjct: 202 AMLLKAVVFGLQIAVISCGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 260


>gi|152972118|ref|YP_001337264.1| ABC transporter membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206579237|ref|YP_002236394.1| hypothetical protein KPK_0517 [Klebsiella pneumoniae 342]
 gi|238896701|ref|YP_002921446.1| putative ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288933378|ref|YP_003437437.1| hypothetical protein Kvar_0495 [Klebsiella variicola At-22]
 gi|290511571|ref|ZP_06550940.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55]
 gi|329997630|ref|ZP_08302887.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3]
 gi|150956967|gb|ABR78997.1| putative transport protein (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206568295|gb|ACI10071.1| putative membrane protein [Klebsiella pneumoniae 342]
 gi|238549028|dbj|BAH65379.1| putative ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288888107|gb|ADC56425.1| protein of unknown function DUF140 [Klebsiella variicola At-22]
 gi|289776564|gb|EFD84563.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55]
 gi|328538940|gb|EGF64994.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3]
          Length = 260

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G ++V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|111018970|ref|YP_701942.1| ABC transporter permease [Rhodococcus jostii RHA1]
 gi|226361065|ref|YP_002778843.1| YrbE family protein [Rhodococcus opacus B4]
 gi|110818500|gb|ABG93784.1| possible ABC transport system, permease component [Rhodococcus
           jostii RHA1]
 gi|226239550|dbj|BAH49898.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 264

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 116/258 (44%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G      +          G ++    +   +++K        I Q +++    +    +
Sbjct: 1   MGVTRSSVLRPVNGALTQAGNIVELFVDVARNTFKRPFQFREFIEQAWFIASVTILPTAM 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++   GAV++ Q    + Q GAE F+     +  +++   L+TA+++AG +GSA+ A++G
Sbjct: 61  VAIPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +  I EEIDA+  +G++ ++ L+ PR+ A+++   LL  L +   I G            
Sbjct: 121 ARTIREEIDAMEVLGINPIQRLVVPRVLAMVLVAILLNGLVSVVGIAGGYFFNVILQGGN 180

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              + + F + A L +I+ G +KA       G++A  +G         +G  V   VV +
Sbjct: 181 PGAYLASFSAFAQLPDIWVGELKAAVFGVIAGVIAAYKGLHPKGGPKGVGDAVNQSVVIT 240

Query: 354 ISIVIIIDSLFAIFYFAI 371
             ++   + +  + Y  I
Sbjct: 241 FLLLFFANLILTMVYLQI 258


>gi|329120837|ref|ZP_08249497.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327459709|gb|EGF06050.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 258

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           +    +G K + FI    S       +++++G            L   +RQ+Y+ GV  V
Sbjct: 2   DFIQTVGAKTLAFIRSIGSVCLFFAQILAHSGTSLLR-------LRLSVRQVYFAGVLSV 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG  QL++F +      +++   LRE+G +L A++ A  +G A+
Sbjct: 55  LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            +EIG MK  E+++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V  +
Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +   +F+S+  +      ++  GLIK+     A+ ++A+ +GF     S  + +  T
Sbjct: 175 WLGLDGGIFWSQMQNNIAFGYDVLNGLIKSACFGVAVTLIAVHQGFHCVPTSEGILRAST 234

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             VV S   V+ +D +   F F
Sbjct: 235 RTVVSSALTVLAVDFILTAFMF 256


>gi|325300148|ref|YP_004260065.1| hypothetical protein Bacsa_3064 [Bacteroides salanitronis DSM
           18170]
 gi|324319701|gb|ADY37592.1| protein of unknown function DUF140 [Bacteroides salanitronis DSM
           18170]
          Length = 246

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 1/239 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  I   G   +   + + +    + +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYIMLMGRVFSRPERVRMYFKQYVNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++
Sbjct: 68  SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVN 127

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I  LI  +P+L   + F+ +IGA    W    +                 +
Sbjct: 128 SASYLILPKILGLITMIPVLVTFSIFAGVIGAFCTAWFAGIMNATDLEYGIQYCFVEWYV 187

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +      
Sbjct: 188 WCSFIKSFFFAFIISSVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLILTKLLS 246


>gi|59802415|ref|YP_209127.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA
           1090]
 gi|194100076|ref|YP_002003216.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|239998068|ref|ZP_04717992.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae 35/02]
 gi|240079831|ref|ZP_04724374.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae FA19]
 gi|240112039|ref|ZP_04726529.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae MS11]
 gi|240116987|ref|ZP_04731049.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID1]
 gi|240122625|ref|ZP_04735581.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID332]
 gi|240127329|ref|ZP_04739990.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae SK-93-1035]
 gi|268593920|ref|ZP_06128087.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           35/02]
 gi|268595976|ref|ZP_06130143.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19]
 gi|268598097|ref|ZP_06132264.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11]
 gi|268602671|ref|ZP_06136838.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1]
 gi|268681221|ref|ZP_06148083.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332]
 gi|268685698|ref|ZP_06152560.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-93-1035]
 gi|59719310|gb|AAW90715.1| putative abc transport protein, inner membrane protein [Neisseria
           gonorrhoeae FA 1090]
 gi|193935366|gb|ACF31190.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae NCCP11945]
 gi|268547309|gb|EEZ42727.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           35/02]
 gi|268549764|gb|EEZ44783.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19]
 gi|268582228|gb|EEZ46904.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11]
 gi|268586802|gb|EEZ51478.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1]
 gi|268621505|gb|EEZ53905.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332]
 gi|268625982|gb|EEZ58382.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 258

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +       G +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGLIQSFGSITLFLLNILAKSGTAFARPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
             +++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           + +  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|113954700|ref|YP_731394.1| transporter membrane component [Synechococcus sp. CC9311]
 gi|113882051|gb|ABI47009.1| possible transporter, membrane component [Synechococcus sp. CC9311]
          Length = 248

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 114/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  +++ K +   + L  Q+   G     +VI+ +   G V   Q   +L+
Sbjct: 10  LGSSLLIGGQAVSATTKGRINTIDLFDQLQEAGPGSFLIVIITALAAGTVFNIQITAELN 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  SMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    AI  A I     Y IP AVF++   +  T  ++ 
Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTNLYSIPPAVFWTAVRTWLTPDDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      IG++A   G      +  +G   T  VV  +  V ++D L     F 
Sbjct: 190 FMLIKALVFGLQIGVIACGWGMTTKGGAKEVGTSTTGAVVMILVSVALMDVLLTQILFG 248


>gi|325579009|ref|ZP_08148965.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159244|gb|EGC71378.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 261

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 1/256 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I             LG              + +     L++Q++ +GV  + +++L    
Sbjct: 6   ISSLGRSVIKFFRALGRSGFMLFGALVGKPQVRKHFPLLVKQLHVLGVQSLLIILLSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG   L  F AE     L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK 
Sbjct: 66  IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  M +D +R +I+PR WA +I++P+L +L     I G ++V   +  +    F
Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGLIAMPILALLFTAIGIWGGALVGVDWKGVDAGSF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S   +  + + +I  G IK+ F A A+  +A+  G+     S  + +  T  VV +  +
Sbjct: 186 WSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQATTRTVVHASLV 245

Query: 357 VIIIDSLFAIFYFAIG 372
           V+ +D +     F  G
Sbjct: 246 VLGLDFILTAIMFGAG 261


>gi|62185216|ref|YP_220001.1| putative permease component of ABC transporter [Chlamydophila
           abortus S26/3]
 gi|62148283|emb|CAH64049.1| putative permease component of ABC transporter [Chlamydophila
           abortus S26/3]
          Length = 261

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 117/253 (46%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +     C     LG  +  T     S    K    S+  Q Y +GV+ +PVVIL   VTG
Sbjct: 8   RIFQILCVFPLELGRWMGFTCAVIKSLSWKKSLFRSVNIQGYDIGVASLPVVILTGAVTG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL   G        +    L EIG +LTA+ ++GR G AI A +G+M++ E
Sbjct: 68  IVLALQSCYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+ T+G++ +     PRI A  I++P L I A +S I G  ++    + +P  V+  
Sbjct: 128 QVSAMETLGVNPLAYFALPRIIAGTIAMPALVIAAVWSGIFGGYLLCRYAFQLPAQVYLH 187

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                  +++I   ++K+      I  +A  +G         + K  T  VV S   ++ 
Sbjct: 188 MVSGNVFISDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247

Query: 360 IDSLFAIFYFAIG 372
            + +   F+  +G
Sbjct: 248 ANCVITAFFHVLG 260


>gi|167564342|ref|ZP_02357258.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
 gi|167571490|ref|ZP_02364364.1| toluene tolerance ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 255

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   IG+ ++  +  +     +   V+                   + +Q++++G     
Sbjct: 1   MISAIGRFVLGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQVHFLGNYSFV 53

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++ +     G V+  QG + L+++G+E     L+++  +RE+G +++A++ AGR+G+++ 
Sbjct: 54  IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++ A+  M +D ++ +I+PR+WA +I++PLL  + +   ++G  +V    
Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    F+S+      +  ++  G++K+     A+  +A+ +G+        +    T 
Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV +   V+ +D L     F+
Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255


>gi|166365969|ref|YP_001658242.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843]
 gi|166088342|dbj|BAG03050.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843]
          Length = 268

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 108/250 (43%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F  +  S      L +  TG      +  +        QM   G + + + ++ + V G 
Sbjct: 8   FSKELSSWFRRCWLAVLLTGRVFYFLFTRQPDWRVTQEQMVAAGPASLIIAMITAAVIGM 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +   Q A +    GA      ++++   RE+  ++ A+++AGR GSA  AEIG+MK+ E+
Sbjct: 68  IFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGRVGSAFAAEIGTMKVTEQ 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  +  D V  L+ PR+ A  + +P L+++A    +    +V    Y I  +VF   
Sbjct: 128 IDALYMLKTDPVEYLVLPRLIACCLMVPALSVMALLIGLGSGLLVGQSLYGIANSVFLDS 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 + ++ +G +K       I I+    G      +  +G+  T  VV  +  + + 
Sbjct: 188 VRGFLGVGDVLSGPVKGVVFGALIAIIGCNWGLTTDGGAKGVGQATTAAVVTMLLAIFVS 247

Query: 361 DSLFAIFYFA 370
           + L     F 
Sbjct: 248 NLLMTWILFQ 257


>gi|159903919|ref|YP_001551263.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9211]
 gi|159889095|gb|ABX09309.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9211]
          Length = 248

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   SS K       LI Q+   G +   +V++     G V   Q A +LS
Sbjct: 10  LGSSMLIGGQAITSSTKGNINKSDLIDQLMEAGPASFIIVLITGISAGTVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G       L++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGVGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLQTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A++I  PL  +L    A+    I    +Y IP  VF++  +    +++I 
Sbjct: 130 IDYLVVPRVIAMVIMAPLQCLLFFTVALWSGQISSTYFYSIPINVFWNSVNEWLVISDIP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I ++A   G      +  +G   T  VV ++  V ++D L     F 
Sbjct: 190 FMLIKAVVFGFQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLSVSLMDVLLTKVLFG 248


>gi|34495903|ref|NP_900118.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34101758|gb|AAQ58126.1| probable ABC transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 257

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 131/264 (49%), Gaps = 8/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             +    +G   V  +      +  L  ++ N+G+           L   IR++Y+ GV 
Sbjct: 1   MTSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLR-------LQMTIREIYFAGVM 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG   L++FG+      ++++  LRE+G +L A++ A R+GS
Sbjct: 54  SLIIIVVSGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLAALLFASRAGS 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG MK  E++DA+  M ++ +  +I+PR WA ++S+P+L  L N   I G  +V 
Sbjct: 114 AMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNVVGIFGGYLVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                +    F+S+      L  ++  G+IK+     A+ ++A+ EG+     +  +   
Sbjct: 174 VVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            T  VV S  +++ +D +   F F
Sbjct: 234 TTRTVVTSALVILALDFVLTAFMF 257


>gi|87123683|ref|ZP_01079533.1| possible transporter, membrane component [Synechococcus sp. RS9917]
 gi|86168252|gb|EAQ69509.1| possible transporter, membrane component [Synechococcus sp. RS9917]
          Length = 248

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 113/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  A++ + +   + L  Q+   G     +VI+     G+V   Q A +LS
Sbjct: 10  LGSSLLIGGQAVAATARGRINTIDLFDQLLEAGPGSFLIVIITGIAAGSVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  RQGAGSTVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    AI    I   + Y IP +VF++   +     ++ 
Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSGQITSTELYSIPPSVFWTSVRTWMQPDDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I +++   G         +G   T  VV  +  V ++D L     F 
Sbjct: 190 FMLIKALVFGLQIAVLSCGWGLTTEGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248


>gi|167626717|ref|YP_001677217.1| ABC-type transport system permease [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667292|ref|ZP_04754870.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254875843|ref|ZP_05248553.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167596718|gb|ABZ86716.1| ABC-type transport system permease protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|254841864|gb|EET20278.1| ABC transporter, permease protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 254

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 126/252 (50%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   N+       L      + +        K  +   I Q+  VGV+ + +++      
Sbjct: 1   MSVFNNIYKLTISLIYSFLKSIDLVLRIVFSKLSIRDCITQIKAVGVNSIIIIVTSGIFI 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V++ QG + LS+FGA      ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  
Sbjct: 61  GLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKAT 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           ++I++++ M ++ +  ++S R WA +IS P+L ++    AI+   ++      I +  F+
Sbjct: 121 DQINSLKVMNVNPISFILSTRFWACVISGPILALIFATVAILAGFVLAEAGLGISYGEFW 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           S   S+ T+++I  G+IK+   A     +A+ +G+     SN + K  T  VV     V+
Sbjct: 181 SNIQSSVTISDITNGIIKSLVFAFITAWIALYQGYYCIADSNGIAKATTKTVVYCCMSVL 240

Query: 359 IIDSLFAIFYFA 370
             D +     F 
Sbjct: 241 GADLILTSIMFG 252


>gi|89891419|ref|ZP_01202925.1| putative ABC transporter [Flavobacteria bacterium BBFL7]
 gi|89516450|gb|EAS19111.1| putative ABC transporter [Flavobacteria bacterium BBFL7]
          Length = 246

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 2/245 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G  I           K       +++++  + +  + +   IS   GAV+A Q
Sbjct: 1   MRFLRHIGKYILMLIGIFKRPTKTSVLRELILKEIDDLVIGSIGITAFISLFMGAVVALQ 60

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L      +           + E      +V++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNLDNPLIPKSLIGFATRQSIILEFAPTFISVIMAGKVGSYITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  LI P+I AL+   P L  +  F  I G  +       +    F      +
Sbjct: 121 EVMGINPLNYLIYPKIIALLF-YPFLIAIIMFVGIFGGFLASVYGNLVSLEDFIVGLQDS 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK       +  +    G+ +   +  +GK  TT  V +   +I+ + + 
Sbjct: 180 FIPWHVAYAFIKTMVFGILLATIPSYHGYYMEGGALEVGKASTTSFVWTCVAIIVANYIL 239

Query: 365 AIFYF 369
                
Sbjct: 240 TQILL 244


>gi|240013249|ref|ZP_04720162.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae DGI18]
 gi|240015696|ref|ZP_04722236.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae FA6140]
 gi|240114786|ref|ZP_04728848.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID18]
 gi|240120321|ref|ZP_04733283.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae PID24-1]
 gi|240124812|ref|ZP_04737698.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae SK-92-679]
 gi|254492848|ref|ZP_05106019.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291]
 gi|260441401|ref|ZP_05795217.1| Putative ABC transport inner membrane subunit [Neisseria
           gonorrhoeae DGI2]
 gi|268600440|ref|ZP_06134607.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18]
 gi|268683391|ref|ZP_06150253.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|291044759|ref|ZP_06570468.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2]
 gi|293397855|ref|ZP_06642061.1| ABC transport system permease [Neisseria gonorrhoeae F62]
 gi|226511888|gb|EEH61233.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291]
 gi|268584571|gb|EEZ49247.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18]
 gi|268623675|gb|EEZ56075.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae
           SK-92-679]
 gi|291011653|gb|EFE03649.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2]
 gi|291611801|gb|EFF40870.1| ABC transport system permease [Neisseria gonorrhoeae F62]
 gi|317165512|gb|ADV09053.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 258

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +       G +        A S          +RQ+Y+ GV  V +V +    
Sbjct: 4   IRSVGAKTLGLIQPFGSITLFLLNILAKSGTAFARPRLSVRQVYFAGVLSVLIVAVSGLF 63

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG  QLS+F +      +++   LRE+G +L A++ A  +G A+ +EIG MK 
Sbjct: 64  VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
             +++A+  M ++ V  +++PR WA + S+PLL  + N + I GA +V   +  +   +F
Sbjct: 124 TGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           + +  +  T+  ++  GLIK+     A+ ++A+ +GF     S  + +  T  VV S   
Sbjct: 184 WPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRASTRTVVSSALT 243

Query: 357 VIIIDSLFAIFYF 369
           ++ +D +   + F
Sbjct: 244 ILAVDFILTAWMF 256


>gi|167753066|ref|ZP_02425193.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216]
 gi|167659380|gb|EDS03510.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216]
          Length = 247

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 ++G      G+  +   K   +   +I +M  +G++ + +  +IS   GAVI  
Sbjct: 1   MLKIFELIGRYFILMGKVFSRPEKRAIYRRRIIYEMESLGLNSIGLTAIISVFIGAVITL 60

Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q +  L   F  +           + E    + A+++AG+ GS+I +EIG+M+I E+IDA
Sbjct: 61  QMSINLESPFIPKYIIGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A ++  P L IL+    I G  ++      +    +      
Sbjct: 121 LEIMGVNSASYLILPKIVATVLFFPFLAILSILIGIAGGYLISALTGIMIPDDYVQGLLY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I   LIK    A  I  ++   G+    +S  +G   T  VV S  +++I + +
Sbjct: 181 DFRPYSITYTLIKMAVFAFIITSISAFYGYYAKGNSLEVGAASTKAVVASSIVIMIFNLI 240

Query: 364 FAIFYF 369
                 
Sbjct: 241 LTQILL 246


>gi|116073591|ref|ZP_01470853.1| possible transporter, membrane component [Synechococcus sp. RS9916]
 gi|116068896|gb|EAU74648.1| possible transporter, membrane component [Synechococcus sp. RS9916]
          Length = 248

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 114/239 (47%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  +++ + K   + L  Q+   G     +V++     G+V   Q A +LS
Sbjct: 10  LGSSLLIGGQAVSATARGKINTIDLFDQLMEAGPGSFLIVLITGVAAGSVFNIQVAAELS 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA      +++I   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 70  GMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    AI    I   ++Y+IP AVF++   +     ++ 
Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFAVAIYSGQITSTEFYNIPPAVFWNSVRTWLQPDDLP 189

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I ++A   G         +G   T  VV  +  V ++D L     F 
Sbjct: 190 FMLIKALVFGLQIAVLACGWGLTTSGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248


>gi|88607911|ref|YP_504642.1| putative ABC transporter, permease protein [Anaplasma
           phagocytophilum HZ]
 gi|88598974|gb|ABD44444.1| putative ABC transporter, permease protein [Anaplasma
           phagocytophilum HZ]
          Length = 244

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/244 (25%), Positives = 116/244 (47%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +G V     +    S     +L    +Q + V    +P+V + S  TG  +A Q
Sbjct: 1   MGLLIPVGRVAIFCVKAVFHSLVPPYYLWITTKQFFEVWFFSLPIVAVTSLFTGGALALQ 60

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
                S   +  F   ++++  +RE+G +L  +++AGR G+A+ AEIG+M+I E+IDA+ 
Sbjct: 61  DTLVGSAKVSGNFMAGIVTVAIVRELGPVLLGLIVAGRIGAAVAAEIGTMRITEQIDALT 120

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
           T+  D    LI+PR+ AL++++P+L I A+   + G  +V           +        
Sbjct: 121 TLDTDPFHYLIAPRVIALVLAMPVLMIYADILGVFGGFVVGTLGLGYGQEEYLGGVMEFL 180

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L ++  GL+KA      I +V    G+   + +  +G   T   V +  ++I+++ +  
Sbjct: 181 LLQDVIEGLVKAVSFGLVISLVGCYNGYHCEIGARGVGTATTKTSVAASMLIILLNYIIT 240

Query: 366 IFYF 369
           +FY 
Sbjct: 241 VFYA 244


>gi|218441471|ref|YP_002379800.1| hypothetical protein PCC7424_4570 [Cyanothece sp. PCC 7424]
 gi|218174199|gb|ACK72932.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424]
          Length = 266

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 110/246 (44%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              S        +  +G         K      + QM  VG   + + ++ + V G +  
Sbjct: 9   GFGSWIQRTWAAVLLSGRAIFFVSIGKIDRQLTLEQMMAVGPGSLVIALITAAVIGMIFT 68

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q A +    GA      ++++   RE+  ++TAV++AGR GSA  AEIG+M++ E+IDA
Sbjct: 69  IQVAREFLALGAGSAVGGILALSLARELSPIMTAVIVAGRVGSAFAAEIGTMQVTEQIDA 128

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  +  D +  L+ PR+ A  + +PL+TI+A    + G  ++    YDI   VF     +
Sbjct: 129 LYMLKTDPIEYLVVPRLVACCVMVPLMTIIALVIGLAGGLLIASSIYDISIEVFLDSIQT 188

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              +++I +G IK       I I+    G      +  +G+  T  VV  +  + + +  
Sbjct: 189 FLKISDILSGPIKGIVFGALIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFVSNFF 248

Query: 364 FAIFYF 369
            +   F
Sbjct: 249 LSWIMF 254


>gi|269128029|ref|YP_003301399.1| hypothetical protein Tcur_3830 [Thermomonospora curvata DSM 43183]
 gi|268312987|gb|ACY99361.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 267

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 105/252 (41%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           + +  +       GL+     E    ++  + +    I Q +++       V+LI+   G
Sbjct: 11  RVLRRAGKALDETGLLFVIFLEGLRRTWDVRTWWGEFIEQCWFIARVTSMPVLLIAIPLG 70

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           A I+ Q      Q GA+  +  L+    + ++  L +A++I+G  GSAI +++G+  I +
Sbjct: 71  ATISLQAGDIARQLGAQSGTGALVVANMITQVAPLASALLISGAGGSAITSDMGARNIRD 130

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+ A+  MG++ V  L++PR+WA      LL  +   S   G          +    +F 
Sbjct: 131 ELAAMEVMGINPVHRLVTPRLWAASTVAVLLCSVVILSGTAGGFYFNVIQQGVSPGAYFD 190

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
              S    +++   L KA         VA   G    +    +G+ V   VV +  +V  
Sbjct: 191 GATSLLQFSDLVVTLFKAWIFGFIAAAVACYAGMNCDLGPVGVGRAVNKAVVVTSILVFS 250

Query: 360 IDSLFAIFYFAI 371
            + +  + Y  +
Sbjct: 251 ANYVITMLYQVL 262


>gi|88807464|ref|ZP_01122976.1| possible transporter, membrane component [Synechococcus sp. WH
           7805]
 gi|88788678|gb|EAR19833.1| possible transporter, membrane component [Synechococcus sp. WH
           7805]
          Length = 257

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 111/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+   ++ + +   + L+ Q+   G     +VI+ S   G V   Q   +LS
Sbjct: 19  LGSSLIIGGQAVTATVRGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELS 78

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             GA      ++++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 79  SMGASATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 138

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L    AI  A     + Y IP  VF+S   S     +I 
Sbjct: 139 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQWSSTELYMIPPQVFWSSVRSWLMPDDIP 198

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             LIKA      I +++   G         +G   T  VV  +  V ++D++     F 
Sbjct: 199 FMLIKALVFGLQIAVLSCGWGMTTAGGPKEVGTSTTGAVVMILVTVALMDTVLTQLLFG 257


>gi|194337270|ref|YP_002019064.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309747|gb|ACF44447.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 264

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 116/243 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +      +     +  K K +    + Q    G   +P+V++ +   GA++A 
Sbjct: 17  LKDFFLTMQDFFLFSLRAFMAMPKIKRYWRDFLDQAGICGTDSIPIVLVSAISIGALLAI 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+M+I+E+IDA+
Sbjct: 77  EVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D +  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ I   +F++  +  
Sbjct: 137 RAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYPR 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   G +KAP  A  I +V+   GF+    +  +G+     +V S  +V+I +   
Sbjct: 197 LAPKDFVVGFLKAPVFAIIITLVSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIANFYV 256

Query: 365 AIF 367
           +  
Sbjct: 257 SKI 259


>gi|254431004|ref|ZP_05044707.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Cyanobium sp. PCC 7001]
 gi|197625457|gb|EDY38016.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Cyanobium sp. PCC 7001]
          Length = 258

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 111/231 (48%)

Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199
           G+  ++  + +  L  L++++   G     +V++ +   G V   Q   +LS+ GA    
Sbjct: 28  GQAISAIARGRIGLNDLMQELLEAGPGSFLIVVITALAAGTVFNIQVVAELSKQGANAAV 87

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259
             L+++   REI  LLTA ++ G+  +A  A++G+MK+ E+IDAI  +  D V+ L+ PR
Sbjct: 88  GGLLALGLSREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPR 147

Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319
           + A+++  P+  +L     I    +     Y+IP +VF++   +     ++   L+KA  
Sbjct: 148 VLAMVVMAPVQCLLFFGVGIWSGQLSSSLLYNIPPSVFWTSVRTWMQPEDLPFMLVKALV 207

Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               I ++A   G         +G   T  VV  +  V ++D+L     F 
Sbjct: 208 FGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVALMDALLTKVLFG 258


>gi|33861880|ref|NP_893441.1| putative transporter, membrane component [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
 gi|33640248|emb|CAE19783.1| possible transporter, membrane component [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 251

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 3/242 (1%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           L   +   G+     ++ K     L  Q+   G   + +V++     G V   Q A QL+
Sbjct: 10  LVSSLIIGGQAINYIFRGKISKNDLFEQLMESGPGSLVIVLITGIAAGTVFNIQVASQLT 69

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  +  + 
Sbjct: 70  SMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEP 129

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLA 308
           ++ L+ PR+ ++II  P+  +L    A+    I    +Y++P  VF++   S   + T +
Sbjct: 130 IQYLVVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPIVFWTSVRSGNVSLTSS 189

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++ + +IK+      I I+A   G         +G   T  VV ++  V ++D +     
Sbjct: 190 DLSSMIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQIL 249

Query: 369 FA 370
           F 
Sbjct: 250 FG 251


>gi|269958397|ref|YP_003328184.1| putative ABC transporter [Anaplasma centrale str. Israel]
 gi|269848226|gb|ACZ48870.1| putative ABC transporter [Anaplasma centrale str. Israel]
          Length = 259

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 110/250 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                       +G +     +          +     RQ + +    +P+V + +  TG
Sbjct: 10  AIGRYFIGLIIPVGRMSVFCAQSVMRGILPPYYFPIAARQFFEMWFFSLPIVGMTALFTG 69

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +  Q         A  F   ++++  +RE+G +L  +++AGR G+A+ AEIG+M+I E
Sbjct: 70  GALVLQDTLVGGGKVAAHFMAGIVTVATVRELGPVLIGLIVAGRVGAAVAAEIGTMRITE 129

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDA+ T+  +  + L+ PR+ AL+I++P+L +  +F  I G   V           +  
Sbjct: 130 QIDALDTLEANPFQYLVMPRVIALMIAMPVLIVYTDFLGIFGGYAVGTLGLGYDSNEYLG 189

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++  GL+KA      I +V    G+     +  +G   T  VV S  ++++
Sbjct: 190 GVAEFLHFKDVAEGLVKAVSFGFVISLVGCYSGYYCSGGARGVGVATTNTVVASSMLIVL 249

Query: 360 IDSLFAIFYF 369
           ++ +  +FY 
Sbjct: 250 LNYVITVFYA 259


>gi|294816012|ref|ZP_06774655.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|326444354|ref|ZP_08219088.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|294328611|gb|EFG10254.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
          Length = 293

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +  H  G   + T E   S ++    L   I Q ++V    +    L+S   GAVIA 
Sbjct: 41  ALAPLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 100

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 101 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 160

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  + +    +G         D     + + F + 
Sbjct: 161 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 220

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       G+VA   G         +G  V   VV +  ++  ++ + 
Sbjct: 221 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 280

Query: 365 AIFYFAI 371
              Y  +
Sbjct: 281 TAIYLQV 287


>gi|148241576|ref|YP_001226733.1| ABC-type transport system, permease component [Synechococcus sp.
           RCC307]
 gi|147849886|emb|CAK27380.1| ABC-type transport system, permease component [Synechococcus sp.
           RCC307]
          Length = 250

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 110/239 (46%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG      G+  A++ + +  +  L   +   G S   VV++I    G V   Q A +L+
Sbjct: 12  LGSSCLIGGQALAAAARGRVPIGELSENLMEAGPSSFLVVLIIGMAAGTVFNIQVAAELT 71

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  LLTA+++ G+  +A  A +G+MK+ E+IDAI  +  D 
Sbjct: 72  KQGAGSTVGGILALGLAREIAPLLTAMLLTGKVATAYAASLGTMKVTEQIDAITMLRTDP 131

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A+++  P+  +L     +    +     Y IP  VF+S   +    +++ 
Sbjct: 132 VEYLVVPRVIAMLVMSPVQCLLFFGIGMWSGMLSSSMLYRIPPPVFWSSMRTWMQPSDVP 191

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           + L+KA      I I+A   G         +G   T  VV  +  + I D +     + 
Sbjct: 192 SMLLKATVFGLEIAIIACGWGLTTRGGPKEVGTSTTGAVVMILLTIAITDVILTQVLYG 250


>gi|325281943|ref|YP_004254485.1| hypothetical protein Odosp_3346 [Odoribacter splanchnicus DSM
           20712]
 gi|324313752|gb|ADY34305.1| protein of unknown function DUF140 [Odoribacter splanchnicus DSM
           20712]
          Length = 245

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 1/241 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             + LG  +    +  +   K   +   +I +   +G++ + +V++ISF  GAV+  Q A
Sbjct: 3   FLYKLGSYLIFIRKAFSRPEKRSVYTKEVIVEFEKLGLNSIVLVVIISFFIGAVLTLQTA 62

Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           + +       +    L     L E    + ++++AG+ GS I +EIGSM+I E+I+A+ T
Sbjct: 63  YNMQSPLLPRYLIGYLTRETMLLEFSSTIVSLILAGKIGSNIASEIGSMRITEQIEALET 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ V  L+ P+I A ++  P+L I + F  I+G  I       + F  F    H +  
Sbjct: 123 MGVNSVSYLVGPKILASLVINPILYIFSVFIGILGGIISGLISGVVNFEDFVYGLHFSFN 182

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +   ++K  F A     +    G+ V   +  +GK  T  VV S   ++  + +   
Sbjct: 183 PYYVTYSIVKTLFFAFIFTSIPAFYGYYVQGGAREVGKAGTKAVVDSSIAILTANLVLTQ 242

Query: 367 F 367
            
Sbjct: 243 I 243


>gi|300775379|ref|ZP_07085241.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
 gi|300506119|gb|EFK37255.1| ABC superfamily ATP binding cassette transporter permease protein
           [Chryseobacterium gleum ATCC 35910]
          Length = 250

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 3/246 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G+      K + F    +R++  +GV+   +V+  S   GAV+A 
Sbjct: 2   LKKFFTAVGEYIILLGKSLQKPQKMRVFWKLFMREINDLGVNSFGLVVFTSIFVGAVVAI 61

Query: 185 QGAFQL---SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           Q        S      F       + + E    + ++++AG+ GS I + IG+M+++E+I
Sbjct: 62  QMFNNFDASSFPIPTSFVGYATKAVLVLEFSPTIISLILAGKVGSYIASSIGTMRVSEQI 121

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++    LI P+I A ++  PLL  ++    I G  I      +     +    
Sbjct: 122 DALDIMGVNSPNFLIFPKIVACVLFNPLLIAISIVFGIGGGYIAGILTGNWTENDYIVGI 181

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                   I+   IK    A  I  V    G+ V   S  +G+  T  VV ++  +II +
Sbjct: 182 QMYMPNLFIYYAFIKTTVFAFIIATVPSYFGYNVKGGSLEVGRASTQAVVWTMVFIIISE 241

Query: 362 SLFAIF 367
            +    
Sbjct: 242 LILTQL 247


>gi|95928284|ref|ZP_01311032.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM
           684]
 gi|95135555|gb|EAT17206.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM
           684]
          Length = 261

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +    + +       G           S  K    +  ++RQ++++G + + V++   
Sbjct: 2   RFVALLGHHTLHFLETAGRFGMFLLVSVYSMIKPPYKVKPIVRQIHFIGANSLFVILFTG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  QG + L++FG+  F    +++  +RE+G +L A+M+ GR+GSAI AE+G M
Sbjct: 62  LFTGMVLGLQGYYTLAKFGSVGFLGGAVALSLIRELGPVLAALMVIGRAGSAICAEVGIM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           + +E+IDA+  M +D +  LI P++ A +I++PLLT + +   I G  ++  + +D+   
Sbjct: 122 RNSEQIDALECMAIDPISYLIVPKLVAGLIAMPLLTAIFDVIGIFGGFMIGVQLFDVSAG 181

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTC 349
            +F   +S+    +I  GL+K+      +  +   +GF +      G  +  + +  T+ 
Sbjct: 182 SYFQGMYSSVVWLDIEMGLVKSLVFGLLLVWICAAKGFYLHLERGGGFGAEGVSRTTTSA 241

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VV +   V++ D L +    
Sbjct: 242 VVLASVSVLVWDYLISAILL 261


>gi|220907786|ref|YP_002483097.1| hypothetical protein Cyan7425_2378 [Cyanothece sp. PCC 7425]
 gi|219864397|gb|ACL44736.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425]
          Length = 255

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 111/235 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+      + +    +L+ Q+  VG   +  V+LI+  TG +   Q   +LSQFG
Sbjct: 21  TLFIFGQVWMRILQRRIHRDNLLEQLAIVGWGSLLAVVLINTFTGVLFTIQTTRELSQFG 80

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A+       ++   RE+  +LTA ++ G   SA  AEIG M++ ++IDA+  +  D +  
Sbjct: 81  AKSLVGGAFALGYCRELAPVLTAGLLVGEVSSAFAAEIGEMRVTDQIDALYILHTDPIDY 140

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ +  + LP+LT+LA   A++G ++   K Y IP  VF +   +   + ++   +
Sbjct: 141 LVVPRVLSCCLMLPVLTVLAIGGAMLGGTLAGAKIYGIPPTVFLNSIQAVLEVGDLCGIV 200

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           +KA       G+V    G      +  + K     VV    +V   + +  I+  
Sbjct: 201 LKAFIFGIITGLVGCGWGLTTTGGAKGVSKSTKAAVVNGWILVFFANFVLTIWLT 255


>gi|124005927|ref|ZP_01690765.1| domain of unknown function superfamily [Microscilla marina ATCC
           23134]
 gi|123988610|gb|EAY28251.1| domain of unknown function superfamily [Microscilla marina ATCC
           23134]
          Length = 248

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 1/244 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG           +  +FK ++   I +   +G+  V +V++ S   GAV A Q A+
Sbjct: 1   MQTLGKYCIFIASLFYNRERFKVYVRLTIDECMRIGIDSVFIVVITSTFIGAVAAVQTAY 60

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L      ++    ++  + + E    +T +++AG+ GS I   +G+M+I E++DAI  M
Sbjct: 61  NLVSPAIPLYVIGTIVRDMAILEFAPTITCIVLAGKVGSNIAGGLGTMRITEQVDAIEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    L+ P+I A +I++P+L ++A F +I+G  I       +  + +          
Sbjct: 121 GINAASYLVLPKITAALITIPMLCVIAGFLSIMGGFISGTVTGALTESQYIYGIRWDFNP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             I+  +IK+   A  I  ++  +GF     +  +G+  T  V  S   V+  D + A  
Sbjct: 181 GGIYFAIIKSFVFAYLISSISAFKGFFTTGGALEVGQSSTNAVTSSTIAVLFADYILAQL 240

Query: 368 YFAI 371
              I
Sbjct: 241 LAGI 244


>gi|91070487|gb|ABE11396.1| putative transporter, membrane component [uncultured
           Prochlorococcus marinus clone HOT0M-1A11]
          Length = 251

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 10/254 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     S   I G  ++         ++ K     L  Q+   G   + +V++     G
Sbjct: 5   NFFKRLLSSLIIGGQAMNFI-------FRGKISKNDLFDQLMESGPGSLLIVLITGIAAG 57

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E
Sbjct: 58  TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +I+AI  +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++
Sbjct: 118 QIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177

Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
              S   + T  ++ + LIK+      I I+A   G         +G   T  VV ++  
Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237

Query: 357 VIIIDSLFAIFYFA 370
           V ++D L     F 
Sbjct: 238 VSLMDVLLTQILFG 251


>gi|313158068|gb|EFR57473.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 247

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 ++G      G+  +   K   +   ++ +M  +G+  + +  +IS   GAVI  
Sbjct: 1   MLKIFELIGRYFILMGKVFSRPEKAAIYRRRIVYEMESLGIDSIGLTAIISVFIGAVITL 60

Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    L   F              + E    + A+++AG+ GS+I +EIG+M+I E+IDA
Sbjct: 61  QMCINLDSPFIPRSLVGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A ++  P LTIL+    IIG   + +    +  A +      
Sbjct: 121 LEIMGVNSASYLILPKIVAAVVFFPFLTILSIAIGIIGGWAIAYLTGIMIPADYIDGLLM 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I   LIK    A  I  ++   G+    +S  +G   T  VV S  +++I + +
Sbjct: 181 DFKPYSIVYSLIKTAVFAYIITSISAFYGYYAKGNSLEVGAASTRAVVASSVVIMIFNLI 240

Query: 364 FAIFYF 369
                 
Sbjct: 241 LTQVLL 246


>gi|217969318|ref|YP_002354552.1| hypothetical protein Tmz1t_0889 [Thauera sp. MZ1T]
 gi|217506645|gb|ACK53656.1| protein of unknown function DUF140 [Thauera sp. MZ1T]
          Length = 262

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 129/267 (48%), Gaps = 8/267 (2%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            ++  +    IG   +  I         L  V+ N+G+     +         IR++Y+ 
Sbjct: 1   MSAIASALRRIGALTIDGIWRLGFATRFLFAVLLNSGQSLRRIH-------LTIRELYFS 53

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           GV  + ++++     G V+  QG   L ++G+      ++++  LRE+G ++ A++ A R
Sbjct: 54  GVLSLLIIMVSGLFVGLVLGLQGYDILQRYGSADAVGVMVALSLLRELGPVIAALLFASR 113

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           +GSAI AEIG MK  E++ A+  M ++ +  +++PR W  ++S+PLL  L +   + G  
Sbjct: 114 AGSAITAEIGLMKTTEQLKAMDMMAVNPIARVVAPRFWGGVLSMPLLAALFSAMGVFGGW 173

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           ++      +    F+S+  +      ++  G+IK+      + ++A+ EG+     +  +
Sbjct: 174 LITVVVIGVDDGAFWSQMQAAVEFRYDVVNGVIKSAVFGTVVSLIAVFEGYDCQPTAEGV 233

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + +T  VV S   ++ +D +   F F
Sbjct: 234 SRAITRTVVTSALAILALDFVLTSFMF 260


>gi|78779806|ref|YP_397918.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9312]
 gi|78713305|gb|ABB50482.1| Protein of unknown function DUF140 [Prochlorococcus marinus str.
           MIT 9312]
          Length = 251

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 10/254 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           KF     S   I G  I+         ++ K     L  Q+   G   + +V++     G
Sbjct: 5   KFFKRLLSSIMIGGQAINFI-------FRGKISKNDLFEQLMESGPGSLLIVLITGIAAG 57

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E
Sbjct: 58  TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +IDAI  +  + ++ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++
Sbjct: 118 QIDAITMLRTEPIQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177

Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
              S   + T  ++ + LIK+      I I+A   G         +G   T  VV ++  
Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237

Query: 357 VIIIDSLFAIFYFA 370
           V ++D L     F 
Sbjct: 238 VSLMDVLLTQILFG 251


>gi|297190651|ref|ZP_06908049.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197719878|gb|EDY63786.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 281

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 112/273 (41%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                           G   V+  +   +     G + +   E   + ++    L   I 
Sbjct: 3   APPPVRPPALADDRPAGVPAVRGPSKLLAPLRETGKLFALAAEVTRAIFRRPFQLREFIE 62

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q ++V    +    L+S   GAVIA Q      Q GA+ F+     +  +++   L+ A+
Sbjct: 63  QFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIVAL 122

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +IAG  GSAI A++GS KI EE+DA+  MG+  V+ L+ PR+ A ++   LL  + +   
Sbjct: 123 LIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMLVAVLLNGMVSVVG 182

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            +G               + + F + A L +++   +KA       GIVA   G      
Sbjct: 183 TLGGYFFNVIMQGGTPGAYLASFSALAQLPDLYVSELKALIFGFIAGIVAAYRGLGPRGG 242

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
              +G  V   VV +  ++  ++ +    Y  I
Sbjct: 243 PKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 275


>gi|300690218|ref|YP_003751213.1| hypothetical protein RPSI07_0537 [Ralstonia solanacearum PSI07]
 gi|299077278|emb|CBJ49904.1| conserved membrane protein of unknown function, DUF140 [Ralstonia
           solanacearum PSI07]
          Length = 255

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 118/247 (47%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG           +          +I Q+ ++G     ++ +     G V+  
Sbjct: 9   VRVLISRLGYAARMLVALVGAWRDVLRRPRLVIEQLRFIGNDSFIIIAVSGLFVGFVLGL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+
Sbjct: 69  QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +  +++PR W   I++PLL  + +   ++G   V      +    F+S+  + 
Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGVLGGYFVGVGLIGVDAGAFWSQMQAG 188

Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
              + ++  G+IK+     A+  VA+ +G+        + +  T  VV +   V+ +D +
Sbjct: 189 VDVVDDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVARATTRTVVIASLAVLALDFV 248

Query: 364 FAIFYFA 370
                F+
Sbjct: 249 LTALMFS 255


>gi|309785522|ref|ZP_07680153.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617]
 gi|308926642|gb|EFP72118.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617]
          Length = 235

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 1/234 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     +F+     L+RQ+Y VGV  + ++++     G V+  QG   L+ + AE 
Sbjct: 1   MLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAET 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +IS
Sbjct: 61  SLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVIS 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIK 316
           PR WA +ISLPLLTI+     I G S+V   +  I    F+S   +      ++   LIK
Sbjct: 121 PRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIK 180

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   A  +  +++  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 181 SVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 234


>gi|227538358|ref|ZP_03968407.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300774198|ref|ZP_07084065.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|227241873|gb|EEI91888.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300758877|gb|EFK55706.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 252

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 109/235 (46%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +       +      F          +  +IRQ Y +G   +P++ +  F+ G V  +
Sbjct: 5   VRNLLIEFANIHRFLMRFLKEVVSPPFEIKEIIRQCYEIGWRSLPLISVTGFIVGFVFTK 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    L +FGA  +   L+SI  +R +  L+TA++ +G+ GS I AE+ SM + E+IDA+
Sbjct: 65  QSRPSLEEFGATSWLPSLISIAIIRALAPLVTALIASGKVGSQIGAELSSMNVTEQIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
              G +  + LI  R+WA  I +P+L        ++G  + I    D+ F  FF++    
Sbjct: 125 EVSGTNPFKFLIVSRVWATTIGIPILCFYTAGIGLLGGYLSIASKDDVSFLSFFTQVFEA 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
               +IF  + +A      IG V+   G+     +  +GK   + VV S+ IV I
Sbjct: 185 IAYKDIFAMVFRAVVFGFTIGAVSSYCGYFSSKGTEGVGKAANSAVVASMFIVFI 239


>gi|21673166|ref|NP_661231.1| hypothetical protein CT0327 [Chlorobium tepidum TLS]
 gi|21646245|gb|AAM71573.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 252

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 119/247 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +           A+  K K +   ++ Q +  GV  +P+V++ S   GA+++ 
Sbjct: 4   FKELVLTMQEFFYFALRAFATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSM 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L +FGA+       S   LRE+G LL  +M++ R G+   AE+G+M+I+E+IDA+
Sbjct: 64  EVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDAL 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D +  L+ PR+ A +I    L  L++F+ +   ++V   Y+ +   +F++  +  
Sbjct: 124 RAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTGALVAQYYHKLDPGIFWNSIYPR 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +     +KAP  A  I +V+   GF+    +  +G+     +V S  +V++ +   
Sbjct: 184 LLPMDFVVSFLKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVANFYV 243

Query: 365 AIFYFAI 371
           +   F I
Sbjct: 244 SKLVFDI 250


>gi|319942210|ref|ZP_08016526.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319804263|gb|EFW01155.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 259

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 134/264 (50%), Gaps = 10/264 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
             NL   +G  ++  ++         G V++  G            L  +I Q++++G  
Sbjct: 2   IVNLLAQLGSWVLSLLSSVGRFGIFSGRVLARLGGA---------GLSPIISQIHFIGNY 52

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++ +     G V+  QG + L  +G+E     L+++  +RE+G ++TA++ AGR+G+
Sbjct: 53  SLLIISVSGLFVGFVLGLQGYYVLVTYGSEEALGTLVALSLVRELGPVVTALLFAGRAGT 112

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEIG M+  E++ A+  MG+D +R + +PR     IS+P+L ++ +   IIGA +V 
Sbjct: 113 ALTAEIGLMRSGEQLAAMEMMGVDPIRRVFAPRFIGGFISMPILALIFSAVGIIGAWMVG 172

Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     F+S+  S     ++I  G +K+     A+ ++A+ +G+A     + + + 
Sbjct: 173 VLLIGTDNGAFWSQMESAVDVFSDICNGFVKSVVFGAAVTLIALYQGWASRPTPDGVARA 232

Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369
            TT VV S  +V+ +D +   + F
Sbjct: 233 TTTTVVVSSLLVLGLDFIMTAWMF 256


>gi|119356498|ref|YP_911142.1| hypothetical protein Cpha266_0663 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353847|gb|ABL64718.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides DSM
           266]
          Length = 264

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 116/243 (47%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +      +     +  K K +    + Q    G   +P+V++ +   G+++A 
Sbjct: 17  LKDFFLTMQEFFMFSVRAFLTIPKIKRYWRDFLDQATICGTDSIPIVLVSAISIGSLLAI 76

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       SI  +RE+G LL  +M++ R G+   AE+G+M+I+E+IDA+
Sbjct: 77  EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGARNGAELGAMQISEQIDAL 136

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A ++    LT L++F+ +  A+ +   Y+ +   +F++  +  
Sbjct: 137 RAFGTDPVAKLVMPRLIAALVMFLPLTALSDFAGLHSAAYMAEHYHRLDPGMFWNAVYPR 196

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               +   G +KAP  A  I +V+   GF+    +  +G+     +V S  +V++ +   
Sbjct: 197 LAPKDFVVGFVKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVVSSGLVLVANFYV 256

Query: 365 AIF 367
           +  
Sbjct: 257 SKI 259


>gi|11465859|ref|NP_054003.1| hypothetical protein PopuCp208 [Porphyra purpurea]
 gi|1723414|sp|P51393|YCF63_PORPU RecName: Full=Probable ABC transporter permease protein ycf63
 gi|1276859|gb|AAC08279.1| ORF263 [Porphyra purpurea]
          Length = 263

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 1/239 (0%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +S      A     K    SL  Q+Y VG   + + +L +     V   Q A +     
Sbjct: 16  TLSLFVSLLARLRTMKINTSSLAEQIYLVGPGSLNITLLTACFISMVFTMQIAKEFLHLD 75

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A      ++ I   RE+  +LTAV+IAG+ GS+  AEI +M+  E+IDA+  +  + +  
Sbjct: 76  AASALGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDY 135

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ P++ A  I LP+L+ ++  ++I  +  V +  Y IP ++F        ++++ F+ L
Sbjct: 136 LVFPKVAACCIMLPILSTISLTASIAISIFVSFVMYGIPSSIFLKSAFLALSVSDFFSCL 195

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF-YFAIG 372
            K+      I  ++ + G      +  +G   T+ VV  +  + I D + + F + + G
Sbjct: 196 QKSLCFGTIIAFISCQWGLTSSGGAKGVGNSTTSSVVTILLTIFITDFILSYFMFQSTG 254


>gi|123969056|ref|YP_001009914.1| putative transporter, membrane component [Prochlorococcus marinus
           str. AS9601]
 gi|123199166|gb|ABM70807.1| possible transporter, membrane component [Prochlorococcus marinus
           str. AS9601]
          Length = 251

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 10/254 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     S   I G  I+         +K K     L  Q+   G   + +V++     G
Sbjct: 5   NFFKRLLSSLIIGGQAINFI-------FKGKISKNDLFDQLMESGPGSLLIVLITGIAAG 57

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E
Sbjct: 58  TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +I+AI  +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++
Sbjct: 118 QIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177

Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
              S   + T  ++ + LIK+      I I+A   G         +G   T  VV ++  
Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237

Query: 357 VIIIDSLFAIFYFA 370
           V ++D       F 
Sbjct: 238 VSLMDVFLTQILFG 251


>gi|262202881|ref|YP_003274089.1| hypothetical protein Gbro_2988 [Gordonia bronchialis DSM 43247]
 gi|262086228|gb|ACY22196.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 285

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 111/252 (44%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +    +    +G+ +          +K +      IRQ  ++  + V   +L++   G
Sbjct: 28  HVMASFDTFGRQMGMFVEVFKVLFVDIFKRRFPFGEFIRQCAFMSSTSVFPTLLVAIPIG 87

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +++ Q +    Q GA  FS     +  +R+   L+T++++AG  GSAI A++GS  I +
Sbjct: 88  VIVSIQVSNIAGQIGATSFSGAATGLGVIRQGAPLVTSLLLAGAVGSAIAADLGSRTIRD 147

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+R MG++ ++ LISPR+ A ++   LL     F   I        +       +  
Sbjct: 148 EIDAMRVMGVNPIQRLISPRLLATMVVSFLLCGFVCFVGFITGYAFNVYFQGGTPGSYTG 207

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F S A+ +++   L KA      + +VA   G +       +   V   VV S+ ++  
Sbjct: 208 TFASFASTSDLLFALGKAVIFGAIVAVVACDRGLSTKGGPAGVANSVNAAVVNSVLLLFT 267

Query: 360 IDSLFAIFYFAI 371
           ++ +    +  +
Sbjct: 268 VNVILTQLFAIL 279


>gi|326382581|ref|ZP_08204272.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198700|gb|EGD55883.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 281

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 7/281 (2%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
           +       +R     + +    HI K    F         +  ++I +         K +
Sbjct: 2   EAQPQVARRRWSDSGARRWFDEHIKKSFETFGRQLAMFVEVFKVLIEDIL-------KKR 54

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                 IRQ  ++  + V   +L++   G +++ Q +    Q GA  FS     +  +R+
Sbjct: 55  FPFGEFIRQCAFMASTSVFPTLLVAIPIGVIVSIQVSNIAGQIGATSFSGAATGLGVIRQ 114

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
              L+T++++AG  GSAI A++GS  I EEIDA+R MG++ ++ LISPR+ A ++   LL
Sbjct: 115 GAPLVTSLLLAGAVGSAIAADLGSRTIREEIDAMRVMGVNPIQRLISPRLLATMVVSFLL 174

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
                F   I   +    +       +   F S A + ++   L+KA      + IVA  
Sbjct: 175 CGFVCFVGFITGYLFNVYFQGGTPGSYTGTFASFAGVPDLLFALVKAVIFGAIVAIVACD 234

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G +       +   V   VV S+ ++  ++ +    +  +
Sbjct: 235 RGLSTSGGPAGVANSVNAAVVNSVILLFTVNVVLTQVFALV 275


>gi|226953846|ref|ZP_03824310.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|294651661|ref|ZP_06728964.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835406|gb|EEH67789.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|292822440|gb|EFF81340.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 258

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I    + + +L  ++ +           KG     I QMY VGV  +
Sbjct: 2   NTIAWLGRLVIERIKGIGAASLMLLQILFSMPS--------KGGFQRFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+    S+     ++  G+IK+   A     VA+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSIVFALICTWVAVYQGYACDPTPEGIATSMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|262373545|ref|ZP_06066823.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
 gi|262311298|gb|EEY92384.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
          Length = 258

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ +    + + +L  ++ +           KG     I QMY VGV  +
Sbjct: 2   NTIAWLGRLVIERVKGIGAASLMLIQILFSMPS--------KGGFQRFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+    S+     ++  G+IK+   A     VA+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSVVFALICTWVAVYQGYACDPTPEGIATSMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|226939988|ref|YP_002795061.1| ABC transport system permease protein [Laribacter hongkongensis
           HLHK9]
 gi|226714914|gb|ACO74052.1| probable ABC transport system permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 261

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   I K +    +        LG  +         S          IR++Y+ GV  + 
Sbjct: 1   MLDGILKAVAGIGHRIIEGVWRLGFALRFLAAIVRHSGTALLRFQLTIREIYFAGVLSLI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           ++++     G V+  QG   L +FG+      L+++  LRE+G +L A++ A RSGSA+ 
Sbjct: 61  IIVVSGTFVGMVLGLQGYTTLMRFGSADALGGLVALSLLRELGPVLAAILFASRSGSAMT 120

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AEIG MK  E++DA+  M ++ V  +++PR WA ++S+PLL  L +   I G   V    
Sbjct: 121 AEIGLMKATEQLDAMAVMAVNPVARVVAPRFWAGVLSMPLLAALFSVMGIFGGYFVGVVM 180

Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +    ++S+  +  +L  ++  G+IK+     A+ ++A+ EG+     +  +    T 
Sbjct: 181 IGLDHGAYWSQMQAAVSLHEDVINGIIKSGVFGVAVTLIAVFEGYDAQPTAAGVSAATTR 240

Query: 349 CVVQSISIVIIIDSLFAIFYF 369
            VV S  +++ +D +   F F
Sbjct: 241 TVVTSALVILALDFVLTAFMF 261


>gi|120609708|ref|YP_969386.1| hypothetical protein Aave_1014 [Acidovorax citrulli AAC00-1]
 gi|326315802|ref|YP_004233474.1| hypothetical protein Acav_0985 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|120588172|gb|ABM31612.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1]
 gi|323372638|gb|ADX44907.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 260

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 121/253 (47%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                + S    +G                      +  Q++++G   + ++ +     G
Sbjct: 8   DVGFATRSLLADMGRAARLFVRLAGLIGPTLQRFGLVRDQLHFLGNYSLSIISVSGLFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L ++G+      L+++  +RE+G +++A++ AGR+G+++ AEIG M+  E
Sbjct: 68  FVLGLQGYYTLQRYGSAQALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEIGLMRAGE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++ A+  M +D VR +++PR WA +I++PLL  + +   +IG  IV      +    F+ 
Sbjct: 128 QLSAMEMMAVDPVRRILAPRFWAGVIAMPLLAAVFSAVGVIGGWIVGVVMLGVDGGAFWG 187

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +  S   +  ++  G++K+      +  +A+ +G+        + +  T  VV +   V+
Sbjct: 188 QMQSGVDVWADVGNGVLKSFVFGVTVTFIALLQGYIAKPTPEGVSRATTRTVVMASLTVL 247

Query: 359 IIDSLFAIFYFAI 371
            +D L   + F+I
Sbjct: 248 GLDFLLTAWMFSI 260


>gi|305664611|ref|YP_003860898.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170]
 gi|88708628|gb|EAR00864.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170]
          Length = 265

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       E      K+      +++++  +    + ++I ISF  G V+A Q
Sbjct: 21  MNYLASIGSYAIMIKEVFRKPTKWSIMRSLILKEIDELIFGSLGILIFISFFIGGVVAIQ 80

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  ++     +           + E      ++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 81  TALNITSELIPKNLVGFATRQSIILEFAPTFCSIIMAGKVGSYITSSIGTMRVTEQIDAL 140

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I AL++  P +  ++ +  I G             A F       
Sbjct: 141 EVMGVNALNYLVFPKIIALLL-YPFIIAISMYVGIFGGWFAGVFGGFSTSADFVEGVQLD 199

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK    A  +  +    GF +   +  +GK  TT  V +  ++II++ + 
Sbjct: 200 FIPFHVTYSFIKTLVFAFILATIPSYHGFYMKGGALEVGKAATTSFVWTSVVIIILNYIL 259

Query: 365 AIFYFA 370
                 
Sbjct: 260 TQLLLG 265


>gi|190576453|ref|YP_001974298.1| putative transmembrane component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
 gi|254522804|ref|ZP_05134859.1| toluene tolerance protein [Stenotrophomonas sp. SKA14]
 gi|190014375|emb|CAQ48023.1| putative transmembrane component of ABC transporter protein
           [Stenotrophomonas maltophilia K279a]
 gi|219720395|gb|EED38920.1| toluene tolerance protein [Stenotrophomonas sp. SKA14]
          Length = 249

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG     +      S   + FL  L R++Y +G   +P++ +     G V+  
Sbjct: 3   FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ FGA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI  +         +   VF+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|126696848|ref|YP_001091734.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9301]
 gi|126543891|gb|ABO18133.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9301]
          Length = 251

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 10/254 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F     S   I G  I+         +K K     L  Q+   G   + +V++     G
Sbjct: 5   NFFKRLLSSLIIGGQAINFI-------FKGKISKNDLFDQLMESGPGSLLIVLITGIAAG 57

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E
Sbjct: 58  TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +I+AI  +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++
Sbjct: 118 QIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177

Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
              S   + T  ++ + LIK+      I I+A   G         +G   T  VV ++  
Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237

Query: 357 VIIIDSLFAIFYFA 370
           V ++D       F 
Sbjct: 238 VSLMDVFLTQILFG 251


>gi|297191127|ref|ZP_06908525.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721749|gb|EDY65657.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 272

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 7/250 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVILISF 176
           + +   Q    G  ++ TG         K  L  L    +  G   V      V+  +SF
Sbjct: 12  LEELGRQLVFYGRSLAWTGRTLRRYK--KETLRLLAEVSFGRGALAVVGGTVGVIAFLSF 69

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+   A++G+M+
Sbjct: 70  FTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMR 129

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+   A  +   YY      
Sbjct: 130 ISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYYGQSAGT 189

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +   F       ++     K    A  I +V    G+        +G  V   V  SI  
Sbjct: 190 YDHYFQQYLPPVDVLWSFGKVIVFAVVIILVHCYYGYYASGGPAGVGVAVGRAVRTSIVA 249

Query: 357 VIIIDSLFAI 366
           + I+D   ++
Sbjct: 250 INILDFFLSL 259


>gi|298372676|ref|ZP_06982666.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275580|gb|EFI17131.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 248

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G  +    +  ++   ++ F   L  ++  +G++ V +++LIS   G ++  
Sbjct: 2   VKKLLTTTGRYVQLMRQTFSAPDNWRVFWRQLPSEIEKLGINTVGIIVLISIFMGVIMTM 61

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q            + +  ++    L E    + ++++AG+ GS I +EIG+M+I E+IDA
Sbjct: 62  QTVMNTENPMLPRYSTGLVLRDTLLLEFSSTIMSLLLAGKVGSNIASEIGTMRITEQIDA 121

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I  L+I +P+L  L+ F  + G   V      I  + F      
Sbjct: 122 LDIMGINSANYLILPKIIGLMICMPMLVTLSVFLGLAGGCGVAVFTDMITLSDFIYGIQY 181

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                     +IK+ F    I  V+   G+     +  +G+  T  VV S  + +  + L
Sbjct: 182 AFVPYYFTYSIIKSFFFGFIISSVSAFYGYYAYGGALDVGRASTNAVVNSSILTLAANVL 241

Query: 364 FAIFYFA 370
                  
Sbjct: 242 LTQLLLV 248


>gi|110596847|ref|ZP_01385137.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM
           13031]
 gi|110341534|gb|EAT59994.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM
           13031]
          Length = 264

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 116/244 (47%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                   +      +     +  K   +   ++ Q    G   +P+V++ +   GA++A
Sbjct: 16  QLKDFFLTMQEFFLFSLRTFMAIPKTIRYWRDVLDQATICGTDSIPIVLVSAISIGALLA 75

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+M+I+E+IDA
Sbjct: 76  IEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDA 135

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +R  G D +  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ I   +F++  + 
Sbjct: 136 LRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYP 195

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +   G +KAP  A  I +V+   GF+    +  +G+     +V S  +V+I +  
Sbjct: 196 RLAPKDFVVGFLKAPVFAVIITLVSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIANFY 255

Query: 364 FAIF 367
            +  
Sbjct: 256 VSKI 259


>gi|325922508|ref|ZP_08184271.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325924178|ref|ZP_08185738.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325545309|gb|EGD16603.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
 gi|325547016|gb|EGD18107.1| conserved hypothetical integral membrane protein [Xanthomonas
           gardneri ATCC 19865]
          Length = 249

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   MVESIRAFGRAGLFSLTVLRGSVPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|90994584|ref|YP_537074.1| hypothetical protein 26 [Porphyra yezoensis]
 gi|122194637|sp|Q1XD94|YCF63_PORYE RecName: Full=Probable ABC transporter permease protein ycf63
 gi|90819148|dbj|BAE92517.1| unnamed protein product [Porphyra yezoensis]
          Length = 263

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 113/236 (47%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            I             K    +L+ Q+Y VG   + + +L +     V   Q A +     
Sbjct: 16  TIRLFFRLLIRLKTIKVNTNNLVEQIYIVGPGSLNITLLTACFISMVFTMQIAKEFLYLD 75

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A      ++ I   RE+  +LTAV+IAG+ GS+  AEI +M+  E+IDA+  +  + +  
Sbjct: 76  AASAIGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDY 135

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ P++ +  + LP+L+I++  ++I  +  V +  YDIP +VF     +  ++++    L
Sbjct: 136 LVFPKVASCFLMLPILSIISLTASIAISLFVAFVMYDIPSSVFLKSAFNALSISDFLICL 195

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            K+ F A  IG ++ + G      +  +G   T+ VV  +  V I D + + F F 
Sbjct: 196 EKSMFFAIIIGFISCQWGLTSNGGAKGVGNSTTSSVVTILFTVFITDFVLSYFMFQ 251


>gi|221069030|ref|ZP_03545135.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220714053|gb|EED69421.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 258

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG  +   + +    A +L  ++   G               +  Q++++G   +
Sbjct: 2   NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L ++G+      ++++  LRE+G ++TA++ AGR+G+A+
Sbjct: 55  AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D V+ +++PR WA +I++PLL  + +   ++G  +V   
Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+ +         ++  G++K+     A+  VA+ +G+A       + +  T
Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLQGYAAKPTPEGVSRATT 234

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV +   V+ +D L     F+I
Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258


>gi|315927603|gb|EFV06934.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 194

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 81/194 (41%), Positives = 117/194 (60%)

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q A+QL+QFGA IF +DLM I   RE+  L+ A++IAGRS S+  A+IG MKI +
Sbjct: 1   MVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITD 60

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EI A+ TMG      ++ PR+ AL++++PL+  +++  +IIG  +V     DI FA F  
Sbjct: 61  EIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLR 120

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
           RF     + +IF GL KAP     IG++A   GF V   + S+G   T  VV +I  VI 
Sbjct: 121 RFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIA 180

Query: 360 IDSLFAIFYFAIGI 373
            D+LF++   + GI
Sbjct: 181 FDALFSVILTSTGI 194


>gi|218262319|ref|ZP_03476833.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223470|gb|EEC96120.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii
           DSM 18315]
          Length = 248

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 2/240 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H +G  +    +  +   ++  F   LI+++Y +GV  + +VI+IS   G VIA Q +
Sbjct: 4   ALHQVGEYVMLMAKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVIIISIFIGTVIAIQIS 63

Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             +S      F        + L E    + ++++AG+ GS I +EIG+M++ E+IDA+  
Sbjct: 64  LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTA 305
           MG++    LI P++  ++  +P+L I + F+ I+G           +  A F        
Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
               I+  +IK+   A  I  +A   G+ V   +  +GK  T  VV S  ++++ D +  
Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243


>gi|264676838|ref|YP_003276744.1| hypothetical protein CtCNB1_0702 [Comamonas testosteroni CNB-2]
 gi|299529658|ref|ZP_07043095.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44]
 gi|262207350|gb|ACY31448.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
 gi|298722521|gb|EFI63441.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44]
          Length = 258

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    IG  +   + +    A +L  ++   G               +  Q++++G   +
Sbjct: 2   NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG + L ++G+      ++++  LRE+G ++TA++ AGR+G+A+
Sbjct: 55  AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ A+  M +D V+ +++PR WA +I++PLL  + +   ++G  +V   
Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174

Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
              +    F+ +         ++  G++K+     A+  VA+ EG+A       + +  T
Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLEGYAAKPTPEGVSRATT 234

Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371
             VV +   V+ +D L     F+I
Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258


>gi|262042753|ref|ZP_06015907.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039978|gb|EEW41095.1| toluene tolerance efflux ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 260

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGSVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I G ++V   +  I    
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F++   +      ++   LIK+   A  +  +A+  G+     S  + +  T  VV +  
Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAVPTSAGISRATTRTVVHASL 244

Query: 356 IVIIIDSLFAIFYFA 370
            V+ +D +     F 
Sbjct: 245 AVLGLDFVLTALMFG 259


>gi|110638590|ref|YP_678799.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
 gi|110281271|gb|ABG59457.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406]
          Length = 243

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 1/230 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G       KF  +    I +   +G + + +V ++S   GAV   Q A 
Sbjct: 1   MKSFGKYMILMGSLFVRREKFSVYWKLTIDECILIGTNSIFIVAIVSSFIGAVTCIQTAA 60

Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L      I+ +  +     + E+    T V++AG+ GS+I  ++G+M+I E++DA+  M
Sbjct: 61  NLVSPLVPIYVVASVVREMSILELAPTFTCVVLAGKVGSSIAGQLGTMRITEQVDALEVM 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I A +I++P+L   A   +I+G  I       I    F          
Sbjct: 121 GINSASYLILPKILASLITIPMLVTFAGLLSILGGYIAGILGNIITTQDFVYGVQIDFNE 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            N+   LIKA   A  I  ++  +G+     +  +G+  TT VV S   V
Sbjct: 181 FNVTFALIKAFVFAFLISSISAYQGYFTKGGALEVGQSSTTAVVNSCIGV 230


>gi|78186330|ref|YP_374373.1| putative ABC transport system permease protein [Chlorobium luteolum
           DSM 273]
 gi|78166232|gb|ABB23330.1| putative ABC transport system permease protein [Chlorobium luteolum
           DSM 273]
          Length = 256

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 118/243 (48%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +      +    A+  K + +    + Q    G   +P+V++ +   G+++A 
Sbjct: 9   IKGFFLTMQDFFFFSVRAFATMPKIRRYWRDFLDQAAICGADSIPIVLVSAISIGSLLAI 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L  FGA+       SI  +RE+G LL  +M++ R GS   AE+G+M+I+E+IDA+
Sbjct: 69  EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDAL 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R  G D V  L+ PR+ A +I    LT L++F+ +  A+ +   Y+ +   +F++  +  
Sbjct: 129 RAFGTDPVAKLVMPRLLAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPR 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             L +   G  KAP  A  I +V+   GF+    ++ +G+     +V S  +V+I +   
Sbjct: 189 LALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTSGVGRSTIKGIVVSSGLVLIANFYV 248

Query: 365 AIF 367
           +  
Sbjct: 249 SKI 251


>gi|91070390|gb|ABE11304.1| putative transporter, membrane component [uncultured
           Prochlorococcus marinus clone HF10-88H9]
          Length = 251

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 10/255 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           + F     S   I G  I+         +K K     L  Q+   G   + +V++     
Sbjct: 4   LNFFKRLLSSLIIGGQAINFI-------FKGKISKNDLFDQLMESGPGSLLIVLITGIAA 56

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G V   Q A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ 
Sbjct: 57  GTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVT 116

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           E+I+AI  +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF+
Sbjct: 117 EQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFW 176

Query: 299 SRFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +   S   + T  ++ + LIK+      I I+A   G         +G   T  VV ++ 
Sbjct: 177 TSVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLV 236

Query: 356 IVIIIDSLFAIFYFA 370
            V ++D       F 
Sbjct: 237 TVSLMDVFLTQILFG 251


>gi|330996070|ref|ZP_08319964.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574067|gb|EGG55645.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 248

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + F    I++M  +GV  + +V+LISF  GAVI  Q   
Sbjct: 7   LATFGRYLMLMGRTFSRPERMRMFFKQYIKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F        + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  M
Sbjct: 67  NIQSPWMPKFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 126

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P++  ++  +P L   + FS  +GA         I               
Sbjct: 127 GVNSANYLILPKVLGMMTMMPFLVCFSIFSGFVGAYATSIIGQVITMDDLTLGLQHDFNE 186

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++ G IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D L    
Sbjct: 187 WYVWMGFIKSIFFAFVITSVSAFYGYTVEGGSVEVGKASTDSVVSSSVLILFSDVLLTQL 246

Query: 368 YF 369
             
Sbjct: 247 LS 248


>gi|325915573|ref|ZP_08177883.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538211|gb|EGD09897.1| hypothetical integral membrane protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 249

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|320007322|gb|ADW02172.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC
           33331]
          Length = 282

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 30  LLAPLRQTGQLFALALAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 89

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG +GSAI A++GS KI EE+DA+
Sbjct: 90  QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 149

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G               + + F + 
Sbjct: 150 EVMGVSPVQRLVVPRVLATMFVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 209

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++ G +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 210 AQLPDLYVGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMVL 269

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 270 TAIYLQI 276


>gi|119946509|ref|YP_944189.1| ABC-type transporter inner membrane protein [Psychromonas
           ingrahamii 37]
 gi|119865113|gb|ABM04590.1| ABC-type transporter inner membrane protein [Psychromonas
           ingrahamii 37]
          Length = 234

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 120/222 (54%), Gaps = 1/222 (0%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
                  I Q++ +G+  +P+++      G V++ QG   L  + AE     ++++  LR
Sbjct: 12  PKLFPLFIGQIFQLGILSLPIILTAGLFIGMVLSLQGYNVLVDYAAEESLGSMVALSLLR 71

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G ++TA++ AGR+GSA+ AEIG M+  E+I ++  M +  ++ +I+PR  A I++LPL
Sbjct: 72  ELGPVVTALLFAGRAGSALTAEIGLMQSTEQIASMEMMAVSPLKRVIAPRFLAGIVTLPL 131

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVA 328
           LT++ N  AI G  ++   +  +    ++S    +   L ++  G+IK+      I  VA
Sbjct: 132 LTLMFNVVAIWGGYLIGVSWMGVDGGAYWSVMQGSVDYLPDVMNGVIKSIVFGVMITWVA 191

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  G+ V  ++  + +  T  VV S  +V+ +D +  +F F 
Sbjct: 192 LYNGYYVMPNAIGISRSTTQTVVVSSLLVLAMDFILTVFMFG 233


>gi|188579086|ref|YP_001916015.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523538|gb|ACD61483.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 249

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G  +       I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTTALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|262280246|ref|ZP_06058030.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258024|gb|EEY76758.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
           RUH2202]
          Length = 258

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  ++ +            G     I QM+ VGV  +
Sbjct: 2   NAIAWLGRLVIERIRGIGVAALMLVQIVFSFPTT--------GGFGRFIYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNIGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA ++SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|311741974|ref|ZP_07715784.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311314467|gb|EFQ84374.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 288

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 104/278 (37%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
              +                             S   ++G   +  G+   + +  +  +
Sbjct: 8   SRPEGDTPNEPTPPTRAEIEREALTFNPFAKVLSGFGLVGNFYNFCGKTFRTMFTRRPVV 67

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
             +++Q +++    +   I++S     +I  Q    L Q GA   +    ++  +REIG 
Sbjct: 68  DEIVQQAWFISSVSIMPAIMVSIPLCMIIVFQVNQLLIQIGAVDLAGAGAAVAVIREIGP 127

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +++ +++AG   +A+ A++G+ KI +EIDA+ T+G+D +  L+ PR+ A       L  +
Sbjct: 128 IVSVLVVAGAGATAVCADLGARKIRDEIDAMETLGIDPIHRLVVPRVIASTFIAVALNGM 187

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            +   + GA             +F           + +   +KA       G+     G 
Sbjct: 188 VSIVGLAGAYYFSVVLQGATPGLFIDGLTLLVGTPDFWASSLKAAIFGLLAGLAGCYLGL 247

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                   +G  V   VV +  ++   +++    +  +
Sbjct: 248 NAKGGPKGVGDAVNQTVVLAFLMLFAANTVITTIFLQL 285


>gi|21245052|ref|NP_644634.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|294627465|ref|ZP_06706049.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294664971|ref|ZP_06730282.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|21110783|gb|AAM39170.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|292598286|gb|EFF42439.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292605249|gb|EFF48589.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 249

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|50086238|ref|YP_047748.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter sp. ADP1]
 gi|49532214|emb|CAG69926.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 258

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ +      A +L  ++ +            G     I QMY VGV  +
Sbjct: 2   NAIAWLGRLVIERVRGIGVAALMLLQILFSMPST--------GGFRRFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G VI  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVIGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGILGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   S      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQSNVQFGHDVVNGIIKSIVFALVCTWIAVYQGYACDPTPEGIATSMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGSDFVLTAVMFG 256


>gi|291515429|emb|CBK64639.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Alistipes shahii WAL 8301]
          Length = 247

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                 ++G      G+  +   K   +   +I +M  +GV+ + +  +IS   GAVI  
Sbjct: 1   MLKIFELIGRYFMLMGKVFSRPEKAAIYRRRIIFEMESLGVNSIGLTAIISVFIGAVITL 60

Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    L   F              + E    + A+++AG+ GS+I +EIG+M+I E+IDA
Sbjct: 61  QMCINLDSPFIPRSLVGYATRETMILEFSSAVVALILAGKVGSSIASEIGTMRITEQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A ++  P LTIL+    I+G  ++      +  A +      
Sbjct: 121 LEIMGVNSASYLILPKIVAAMVFFPFLTILSILIGILGGYLIAAATGIMIPADYVDGLLM 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I   LIK  F A  I  ++   G+    +S  +G   T  VV S  ++++ D +
Sbjct: 181 DFKPYSITYTLIKTVFFAYIITSISAFYGYNARGNSLEVGTASTRAVVASCVVILLFDLI 240

Query: 364 FAIFYF 369
                 
Sbjct: 241 LTQVLL 246


>gi|21233625|ref|NP_639542.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770590|ref|YP_245352.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115493|gb|AAM43424.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575922|gb|AAY51332.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 249

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|89255923|ref|YP_513285.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314405|ref|YP_763128.1| toluene ABC transporter ATP-binding/membrane protein [Francisella
           tularensis subsp. holarctica OSU18]
 gi|167009174|ref|ZP_02274105.1| toluene ABC superfamily ATP binding cassette transporter, membrane
           protein [Francisella tularensis subsp. holarctica
           FSC200]
 gi|169656537|ref|YP_001427977.2| toluene tolerance protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254367281|ref|ZP_04983308.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290953704|ref|ZP_06558325.1| putative ABC transport system permease protein [Francisella
           tularensis subsp. holarctica URFT1]
 gi|295312939|ref|ZP_06803658.1| putative ABC transport system permease protein [Francisella
           tularensis subsp. holarctica URFT1]
 gi|89143754|emb|CAJ78956.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129304|gb|ABI82491.1| toluene ABC superfamily ATP binding cassette transporter, membrane
           protein [Francisella tularensis subsp. holarctica OSU18]
 gi|134253098|gb|EBA52192.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           holarctica 257]
 gi|164551605|gb|ABU61021.2| toluene tolerance protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 254

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 122/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+ + I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILASFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     ++  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252


>gi|289662322|ref|ZP_06483903.1| toluene tolerance protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 249

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|119897098|ref|YP_932311.1| hypothetical protein azo0807 [Azoarcus sp. BH72]
 gi|119669511|emb|CAL93424.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 263

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 124/254 (48%), Gaps = 1/254 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            + +    S      LG            S +    +   +R++Y+ GV  + ++++   
Sbjct: 7   ALRRLGGMSIDAVWRLGFATRFLLMVLVYSGQSVRRIHLTLREIYFAGVLSLLIILVSGL 66

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L +FG+      L+++   RE+G ++ A++ A R+GSA+ AEIG MK
Sbjct: 67  FVGLVLGLQGYETLQRFGSSDALGVLVALSLTRELGPVVAALLFASRAGSAVTAEIGLMK 126

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ A+  M ++ +  +++PR W  +IS+PLL  + +   + G  ++   +  +    
Sbjct: 127 ATEQLKAMDMMAVNPLARVVAPRFWGGVISMPLLAAMFSAMGVFGGWLIGVVFIGVDDGA 186

Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           F+S+  +   +  ++  G+IK+     A+ ++A+ EG+     +  + + +T  VV S  
Sbjct: 187 FWSQMQAAVDVRYDVLNGVIKSFVFGVAVSLIAVFEGYDCTPTAEGVSRAITRTVVSSAL 246

Query: 356 IVIIIDSLFAIFYF 369
            ++ +D +   F F
Sbjct: 247 AILALDFVLTSFMF 260


>gi|289667685|ref|ZP_06488760.1| toluene tolerance protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 249

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSVRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|166710003|ref|ZP_02241210.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 249

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|293610802|ref|ZP_06693102.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827146|gb|EFF85511.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123627|gb|ADY83150.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 258

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  ++ +            G     I QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGVAALMLLQIVFSFPSS--------GGFGRFIYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA ++SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|317968902|ref|ZP_07970292.1| putative transporter, membrane component [Synechococcus sp. CB0205]
          Length = 257

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 109/239 (45%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G+  ++  K +     LI ++   G     ++++     G V   Q A +L 
Sbjct: 18  LGESLLIGGQAVSALAKGQINPNDLIAELMEAGPGSFLIILITGLAAGTVFNIQAASELV 77

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA      ++++   REI  +LTA ++ G+  +A  A++G+MK+ E+IDAI  +  D 
Sbjct: 78  KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 137

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A+++  P+  +     AI    +     Y+IP  VF++        +++ 
Sbjct: 138 VQYLVVPRLLAMVVMTPVQCLAFFGVAIWSGQVSSAILYNIPPDVFWTSVRGWMQPSDLP 197

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             L+KA      I ++A   G         +G   T  VV  +  V ++D +     F 
Sbjct: 198 AMLLKAGVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 256


>gi|146298213|ref|YP_001192804.1| hypothetical protein Fjoh_0449 [Flavobacterium johnsoniae UW101]
 gi|146152631|gb|ABQ03485.1| protein of unknown function DUF140 [Flavobacterium johnsoniae
           UW101]
          Length = 248

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 98/247 (39%), Gaps = 2/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G       E      K+      + +++  + +  + +V  ISF  G V+A 
Sbjct: 3   LIRYLSQIGKYFLMLKEIFNKQTKWPVMKNLIFKEIDDLIIDSLGIVCFISFFIGGVVAI 62

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q A  L+      +          + E      +V++AG+ GS I + IG+M++ E+IDA
Sbjct: 63  QTALNLTNPLIPKYLIGFATRQSVVLEFAPTFISVIMAGKMGSYITSSIGTMRVTEQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++ V  L+ P+I AL +  P +  ++ F  I G  +          A F      
Sbjct: 123 LEVMGVNSVNYLVFPKIIAL-LMYPFVIGISMFLGIFGGWLACAYGGFSTGADFIMGAQK 181

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I    IK    A  +  +    G+ +   +  +GK  TT  V +   +I+++ +
Sbjct: 182 DFIPFHITYAFIKTLIFAMLLATIPSFHGYYMKGGALEVGKASTTSFVWTSVTIILLNYI 241

Query: 364 FAIFYFA 370
                  
Sbjct: 242 LTQLLLG 248


>gi|302036847|ref|YP_003797169.1| putative ABC transporter permease [Candidatus Nitrospira defluvii]
 gi|300604911|emb|CBK41244.1| putative ABC transporter, permease component [Candidatus Nitrospira
           defluvii]
          Length = 291

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 2/277 (0%)

Query: 90  RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149
           R +            +  + +   +G+K +       + A +    + +      +    
Sbjct: 13  RHESSLGPTVLLHEKDGLQRMIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGR 70

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
              L  L+RQ+ + GV  +PV  +I+ + G +I  Q   QL + GA      ++ +  +R
Sbjct: 71  GETLRVLVRQILFTGVDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIR 130

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+G L+TA ++ GRSG+AI  E+G+M +  E+ A+R MG+   R +I PR+  +++S+  
Sbjct: 131 ELGPLITAFIVVGRSGTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLC 190

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           LT+  +  A++G  ++      IPF  F        +  ++    IK      A+  +  
Sbjct: 191 LTLYFDVVAVLGGYLIADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICC 250

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             G AV      + ++ T  ++ S  + ++ID +  +
Sbjct: 251 YHGLAVRSSFTEVPQQTTRAMINSFVLCLLIDVVVTV 287


>gi|225677253|ref|ZP_03788238.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590703|gb|EEH11945.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 187

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 93/185 (50%)

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q +        E     L++I  ++E+G +L ++++ G+ GS++ AEIG+M+I E+ID
Sbjct: 1   SLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQID 60

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
            + T+ ++  + LI+PRI A II  P+LT+ A+   I G  I     ++    ++     
Sbjct: 61  VLTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNIYIKHTA 120

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 +  TGLIKA      I + +   G+     +  +G   T+ VV S  ++I+ + 
Sbjct: 121 QFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANY 180

Query: 363 LFAIF 367
           +  + 
Sbjct: 181 MITLI 185


>gi|188993823|ref|YP_001905833.1| putative transporter [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167735583|emb|CAP53801.1| putative transporter [Xanthomonas campestris pv. campestris]
          Length = 249

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|124026456|ref|YP_001015571.1| putative transporter, membrane component [Prochlorococcus marinus
           str. NATL1A]
 gi|123961524|gb|ABM76307.1| possible transporter, membrane component [Prochlorococcus marinus
           str. NATL1A]
          Length = 249

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 106/235 (45%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           I   G+  AS  K       LI Q+   G     +V++     G V   Q A +LS+ G 
Sbjct: 15  ILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGL 74

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 L++I   REI  LLTA ++ G+  +A  A+IG+MK+ E+IDAI  +  D V  L
Sbjct: 75  GSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYL 134

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A+++  P+  +L    A+          Y IP ++F++        +++   L+
Sbjct: 135 VVPRLCAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLPFMLV 194

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           KA      I I+A   G         +G   T  VV ++  V ++D L     F 
Sbjct: 195 KALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFG 249


>gi|187931162|ref|YP_001891146.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187712071|gb|ACD30368.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 254

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++ + M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSFKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|255319835|ref|ZP_05361040.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SK82]
 gi|262380367|ref|ZP_06073521.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SH164]
 gi|255303154|gb|EET82366.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SK82]
 gi|262297813|gb|EEY85728.1| toluene tolerance efflux transporter [Acinetobacter radioresistens
           SH164]
          Length = 258

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ +        +L  +I +   +          +   I QMY VGV  +
Sbjct: 2   NAVAWLGRLVIERVRGIGVATLMLLQIIFSLPTWLG--------VKLFIYQMYRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++++  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVALTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRIVSPRLWAGIVSLPMLTVIFGAVGILGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   S+     ++  G+IK+   A     +A+ +G+A    S  +    T
Sbjct: 174 FLGVDEGSFWSGMQSSVQFGHDVVNGIIKSTVFALICTWIAVYQGYACEPTSEGIATSTT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVFSSLCVLGFDFVLTAVMFG 256


>gi|58579932|ref|YP_198948.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84621937|ref|YP_449309.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58424526|gb|AAW73563.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365877|dbj|BAE67035.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 249

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G  +       I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|295088056|emb|CBK69579.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Bacteroides xylanisolvens
           XB1A]
          Length = 235

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 1/235 (0%)

Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196
              G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  Q    +      
Sbjct: 1   MLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMP 60

Query: 197 IF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
            +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  MG++    L
Sbjct: 61  RWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYL 120

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           I P+I A++  +P+L   + F+ IIGA    W    +                 I+ G+I
Sbjct: 121 ILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWFIWAGII 180

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 181 KSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLILTKLLMG 235


>gi|254368757|ref|ZP_04984770.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. holarctica FSC022]
 gi|157121678|gb|EDO65848.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. holarctica FSC022]
          Length = 254

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 121/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     ++  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252


>gi|72382734|ref|YP_292089.1| putative transporter, membrane component [Prochlorococcus marinus
           str. NATL2A]
 gi|72002584|gb|AAZ58386.1| Protein of unknown function DUF140 [Prochlorococcus marinus str.
           NATL2A]
          Length = 249

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 107/235 (45%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           I   G+  AS  K       LI Q+   G     +V++     G V   Q A +LS+ G 
Sbjct: 15  ILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGL 74

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 L++I   REI  LLTA ++ G+  +A  A+IG+MK+ E+IDAI  +  D V  L
Sbjct: 75  GSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYL 134

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI A+++  P+  +L    A+          Y IP ++F++        +++   L+
Sbjct: 135 VVPRICAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLPFMLV 194

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           KA      I I+A   G         +G   T  VV ++  V ++D L     FA
Sbjct: 195 KALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFA 249


>gi|325927586|ref|ZP_08188818.1| putative integral membrane protein [Xanthomonas perforans 91-118]
 gi|325542051|gb|EGD13561.1| putative integral membrane protein [Xanthomonas perforans 91-118]
          Length = 249

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFMAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|319761579|ref|YP_004125516.1| hypothetical protein Alide_0863 [Alicycliphilus denitrificans BC]
 gi|330823447|ref|YP_004386750.1| hypothetical protein Alide2_0819 [Alicycliphilus denitrificans
           K601]
 gi|317116140|gb|ADU98628.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
 gi|329308819|gb|AEB83234.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 260

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 121/248 (48%), Gaps = 1/248 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S+   LG+                     +  Q++++G   + ++ +     G V+A 
Sbjct: 13  VRSKLADLGMGARLFVRLVGLFGTAMRRFGLVRDQVHFLGNYSLSIIAMSGLFVGFVLAL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L  +G+      ++++  +RE+G ++TA++ AGR+G+++ AEIG M+  E++ A+
Sbjct: 73  QGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEIGLMRAGEQLSAM 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V+ +++PR W  +I++PLL  + +   +IG  +V      +    F+ +  S+
Sbjct: 133 EMMAVDPVQRILAPRFWGGVIAMPLLAAVFSAVGVIGGWLVGVVLIGVDGGAFWGQMQSS 192

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  ++  G++K+     A+  +A+ +G+        + +  T  VV +   V+ +D +
Sbjct: 193 VDVWKDVGNGVVKSVVFGVAVTFIAVLQGYMAKPTPEGVSRATTRTVVMASLTVLGLDFV 252

Query: 364 FAIFYFAI 371
                F+I
Sbjct: 253 LTALMFSI 260


>gi|78050007|ref|YP_366182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038437|emb|CAJ26182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 249

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G     +      S   + F+  L+R++Y VG   +P++ +     G V+  
Sbjct: 3   FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI G          I    F+S   ++
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
             +  +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|239945573|ref|ZP_04697510.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
 gi|239992040|ref|ZP_04712704.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379]
          Length = 293

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 41  LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 100

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++I+G +GSAI A++GS KI EE+DA+
Sbjct: 101 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSRKIREELDAM 160

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F + 
Sbjct: 161 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 220

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 221 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 280

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 281 TAIYLQI 287


>gi|226227980|ref|YP_002762086.1| putative transporter [Gemmatimonas aurantiaca T-27]
 gi|226091171|dbj|BAH39616.1| putative transporter [Gemmatimonas aurantiaca T-27]
          Length = 264

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 112/245 (45%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    H  G       +          ++   IRQM  +GV  VP+ ++++   G V A 
Sbjct: 15  TAGLLHAFGRRAYFARDIARGLRDPGTWIPETIRQMQRIGVESVPLTVIVAAFLGGVTAF 74

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q  +QL           +     + E+G LLTA+++ GR G+ + AEIG+M++ E+IDA+
Sbjct: 75  QTRYQLFPGVQLSVVGLIARQSIVLELGPLLTALVLTGRVGARMTAEIGTMRVTEQIDAL 134

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+  D V  L +PR  A ++ LP L +LAN +AI  A   +    D+  + F       
Sbjct: 135 ETLAFDPVAYLATPRFIAGVVMLPTLVMLANATAIFSAWATLVLATDVRTSDFLGGLRLA 194

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T   +   LIKA     AI  V   EG+     +  +GK     VV +   ++++D++ 
Sbjct: 195 FTAFQVVYSLIKATCFGAAIAFVCSYEGYVTEAGAEGVGKSTALAVVIASVSILVLDAIV 254

Query: 365 AIFYF 369
           A    
Sbjct: 255 AAVLA 259


>gi|326799081|ref|YP_004316900.1| hypothetical protein Sph21_1668 [Sphingobacterium sp. 21]
 gi|326549845|gb|ADZ78230.1| protein of unknown function DUF140 [Sphingobacterium sp. 21]
          Length = 244

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 1/241 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G  +           K   +   ++ +M  +GV  + ++ +IS   GAV+  Q A
Sbjct: 2   FFTSFGKYLLLLKSVFKKPEKASIYWKEIMHEMNSIGVGSLGLIAIISTFIGAVMTMQIA 61

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           FQL S          +     + E+   ++A+++AG+ GS+I ++IGSM++ E+IDA+  
Sbjct: 62  FQLVSDLIPNSIIGQINRDSSILELSPTISALVLAGKVGSSISSQIGSMRVTEQIDALEI 121

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A I  +P+L IL+ F A+ G  I       +  A +         
Sbjct: 122 MGINAPGYLILPKILAGITMVPVLVILSIFLALSGGLIGGALSGAVTPADYIMGITGDFN 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +   L+KA      I  VA   GF V   +  +G+  T  VV S  +++  D +   
Sbjct: 182 GYTVAVALVKAFVFGFVITSVAAYHGFYVKGGALEVGQASTKSVVVSCIMILATDYVITA 241

Query: 367 F 367
            
Sbjct: 242 L 242


>gi|194367789|ref|YP_002030399.1| hypothetical protein Smal_4017 [Stenotrophomonas maltophilia
           R551-3]
 gi|194350593|gb|ACF53716.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia
           R551-3]
          Length = 249

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG     +      S   + FL  L R++Y +G   +P++ +     G V+  
Sbjct: 3   FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ FGA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI  +         +   VF+S    +
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRGS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSAMLF 248


>gi|39996027|ref|NP_951978.1| ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39982792|gb|AAR34251.1| ABC transporter, permease protein, putative [Geobacter
           sulfurreducens PCA]
          Length = 256

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   S           +       ++  G+    + Q   +GV  + ++ L    TG V+
Sbjct: 8   HTVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVM 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   ++++  ++E+G +L+++M+AGR GS+I AE+G+M + E++D
Sbjct: 68  ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVD 127

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D V  L++ R+ AL++++P+L ++ +  A++G  I+    YDI   +++    
Sbjct: 128 AMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLP 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  G++K       I ++    G +    +  +G      VV S  +V++ D 
Sbjct: 187 QFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADF 246

Query: 363 LFAIFY 368
                +
Sbjct: 247 FMTKIF 252


>gi|118496937|ref|YP_897987.1| ABC-type transport system permease protein [Francisella tularensis
           subsp. novicida U112]
 gi|254372307|ref|ZP_04987798.1| hypothetical protein FTCG_01374 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118422843|gb|ABK89233.1| ABC-type transport system permease protein [Francisella novicida
           U112]
 gi|151570036|gb|EDN35690.1| hypothetical protein FTCG_01374 [Francisella novicida GA99-3549]
 gi|328676409|gb|AEB27279.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Francisella cf. novicida
           Fx1]
          Length = 254

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 121/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|162451968|ref|YP_001614335.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162550|emb|CAN93855.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 296

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 1/268 (0%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
             +      +         + +        A  +G +    G+  A     +      +R
Sbjct: 25  PPAPPVKRPRAPIAQEPSGVHQLGGSFLQIAATVGGMAVLAGKIAARVATLRVDGAEFMR 84

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
            +Y +GV  +P+V++ +  TGA++  Q A  + +FGA            LREI  LLTA+
Sbjct: 85  NLYRMGVKSMPIVVVTALFTGAIMVIQAAPLVERFGAHGLLGWGAGFGTLREIAPLLTAL 144

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           MI GR G+   AE+G+M + E+IDA+R + +D V  LI+PR  A++++L L  I A+  A
Sbjct: 145 MINGRVGANNTAELGTMVVTEQIDALRVLAIDPVSFLIAPRFLAMVLTLLLSVIFADALA 204

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           ++GA++       +  AVF++   S    + ++ +GL+K+      + + + + G  V  
Sbjct: 205 LLGAALTGDLLLGVAPAVFYNGLTSGLLDIGDVMSGLVKSVVFGVVLALSSCQYGLGVTG 264

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +  +G+ V   VV S + + I+D   +
Sbjct: 265 GAPGVGRAVNATVVASAAGIFILDYFVS 292


>gi|302523371|ref|ZP_07275713.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
 gi|302432266|gb|EFL04082.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
          Length = 253

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + + T E   + ++        I Q +++    +    L+S   GAVIA 
Sbjct: 1   MLGPLRQTGRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ +++IAG  GSAI A++GS KI EE+DA+
Sbjct: 61  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAM 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G   +           +   F + 
Sbjct: 121 EVMGVSPVQRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSAL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++ G +KA       GIVA   G         +G  V   VV +  ++++++   
Sbjct: 181 AQLPDLYVGELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAM 240

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 241 TAVYLQI 247


>gi|208780390|ref|ZP_03247731.1| toluene tolerance protein Ttg2B [Francisella novicida FTG]
 gi|208743758|gb|EDZ90061.1| toluene tolerance protein Ttg2B [Francisella novicida FTG]
          Length = 241

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +             K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 5   LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 64

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 65  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 124

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 125 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 184

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 185 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 239


>gi|254373781|ref|ZP_04989264.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548]
 gi|151571502|gb|EDN37156.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548]
          Length = 254

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +             K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+ T ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|116747850|ref|YP_844537.1| hypothetical protein Sfum_0402 [Syntrophobacter fumaroxidans MPOB]
 gi|116696914|gb|ABK16102.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 258

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 115/248 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
                    + G  +   GE     +     +   + Q+ ++G   + ++ + +  TG V
Sbjct: 11  GRRCVHAVRLAGRSLLFLGEALGYGFVPPLKIRRSLEQIVFIGAKSLIIIFVTALSTGMV 70

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A +    L     E     L+++  +RE+G +L+A+++ GR+GSA+ AEIG M++ E+I
Sbjct: 71  LALEALHMLRGGATENILGALVALSIVRELGPVLSALIVTGRAGSAMTAEIGIMRLTEQI 130

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  M ++ ++ +++P+I A ++S+P+L    +   I+G   V    Y +P   FF   
Sbjct: 131 DALEMMAVNPIKHVVTPKIVAGVVSMPVLCAFFDVVGILGGYFVGVVIYGVPEVHFFGGM 190

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  ++  GL K+     A+  +    G+     +  + +  T  VV +   V+++D
Sbjct: 191 TKAVAYLDVAGGLFKSAVFGLAMSWICSMMGYGAAATAEGVSRATTNAVVITSIAVLVLD 250

Query: 362 SLFAIFYF 369
            +      
Sbjct: 251 YMVTSLLL 258


>gi|307634769|gb|ADI83773.2| transporter membrane protein of unknown function DUF140 [Geobacter
           sulfurreducens KN400]
          Length = 256

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   S           +       ++   +    + Q   +GV  + ++ L    TG V+
Sbjct: 8   HTVKSFLAEFQAFCVLSLRAVVRIFRRPSYYREFVIQFDKMGVGSLFIICLTGLFTGMVM 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   ++++  ++E+G +L+++M+AGR GS+I AE+G+M + E++D
Sbjct: 68  ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVD 127

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D V  L++ R+ AL++++P+L ++ +  A++G  I+    YDI   +++    
Sbjct: 128 AMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLP 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  G++K       I ++    G +    +  +G      VV S  +V++ D 
Sbjct: 187 QFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADF 246

Query: 363 LFAIFY 368
                +
Sbjct: 247 FMTKIF 252


>gi|150025444|ref|YP_001296270.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86]
 gi|149771985|emb|CAL43461.1| Probable ABC-type transport system, permease component
           [Flavobacterium psychrophilum JIP02/86]
          Length = 248

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G       E      K+      + +++  + +  + +V  ISF  G V+A 
Sbjct: 3   LLRYLSQIGRYFLMIVEIFKKPTKWSVMRTLIFKEIDDLIIGSLGIVAFISFFVGGVVAI 62

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q A  L+      +          + E      ++++AG+ GS I + IG+M++ E+IDA
Sbjct: 63  QTALNLTNPLIPKYLIGFATRQSIILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDA 122

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++ +  L+ P++ AL++  P L  +A F  I+G  I          A F +    
Sbjct: 123 LEVMGVNSLNYLVFPKLIALLL-YPFLIGIAMFLGILGGYIASVYGGFGTHADFLNGLQK 181

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +I    IK    A  +  +    G+ +   +  +GK  T   V +  ++I+++ +
Sbjct: 182 EFIPFHITYAFIKTLIFALILATIPSFHGYYMKGGALEVGKASTVSFVWTSVMIILMNYI 241

Query: 364 FAIFYF 369
                 
Sbjct: 242 LTQLLL 247


>gi|318059765|ref|ZP_07978488.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actG]
 gi|318075809|ref|ZP_07983141.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actF]
          Length = 287

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 108/239 (45%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + + T E   + ++        I Q +++    +    L+S   GAVIA Q      Q
Sbjct: 43  GRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQ 102

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +++   L+ +++IAG  GSAI A++GS KI EE+DA+  MG+  V
Sbjct: 103 LGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPV 162

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR+ A +    LL  L +    +G   +           +   F + A L +++ 
Sbjct: 163 QRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSALAQLPDLYV 222

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G +KA       GIVA   G         +G  V   VV +  ++++++      Y  I
Sbjct: 223 GELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 281


>gi|323527530|ref|YP_004229683.1| hypothetical protein BC1001_3209 [Burkholderia sp. CCGE1001]
 gi|323384532|gb|ADX56623.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001]
          Length = 259

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 125/259 (48%), Gaps = 1/259 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            IG  I              G             +        + +Q+++VG   + ++ 
Sbjct: 1   MIGSLISTLGRSVLDGLGTAGYATRFFFRLLFQFFPLLRRPRLVTKQIHFVGNYSLVIIA 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEI
Sbjct: 61  VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +   + G  +V      +
Sbjct: 121 GLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVAGGYVVGVLLIGV 180

Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+      +  ++  G++K+     A+  VA+ +G+        + +  T  VV
Sbjct: 181 DAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRATTKTVV 240

Query: 352 QSISIVIIIDSLFAIFYFA 370
            +   V+ +D L     F+
Sbjct: 241 YASLAVLGLDFLLTALMFS 259


>gi|319788633|ref|YP_004148108.1| hypothetical protein Psesu_3054 [Pseudoxanthomonas suwonensis 11-1]
 gi|317467145|gb|ADV28877.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 249

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      LG     +     +S   + FL  L R+ Y +G   +P++ +     G V+  
Sbjct: 3   AVGAVRSLGRAGLFSLSVLRASLPSRDFLAELARETYKIGGRSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ FGA      L+ +   RE+G +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTFGAADALSTLLGLSLYRELGPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++ +PLLT      AI  +     K   +    F++    +
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLCVPLLTGFFCSLAISASWFEAVKVLGLDNGTFWAALQGS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    L+K+        +VA   GF             T  VV +  +V++++ +
Sbjct: 183 VDFWDDFGVALLKSAVFGGVSALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMLNFV 242

Query: 364 FAIFYFA 370
            +   F 
Sbjct: 243 MSALLFQ 249


>gi|294672817|ref|YP_003573433.1| hypothetical protein PRU_0026 [Prevotella ruminicola 23]
 gi|294473166|gb|ADE82555.1| putative membrane protein [Prevotella ruminicola 23]
          Length = 251

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G  +   G   +   + + FL   I +M  +G++ + +V++ISF  GAVI  Q   
Sbjct: 10  LTTFGRYLMLMGRVFSRPERMRMFLKQYITEMTQLGINSIGIVLIISFFIGAVICIQMKL 69

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       +        + L E    +  +++AG+ GS I +E+G+M++ ++IDA+  M
Sbjct: 70  NIQSPWMPRWVAGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIM 129

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +P L I ++ + IIGA    +  + I      +        
Sbjct: 130 GINSACYLILPKIIGLLTIMPFLVIFSSATGIIGAYGTAYIGHIIAPDDLTAGLQHAFIP 189

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++  +IK+ F A  I  V    G+ V   S ++GK  T  VV S  +++  D      
Sbjct: 190 WFVWMSIIKSQFFAFIISSVPAFCGYTVEGGSVNVGKASTDAVVTSSVLILFSDVFLTQL 249

Query: 368 YF 369
             
Sbjct: 250 LS 251


>gi|332041054|gb|EGI77422.1| hypothetical protein HGR_06456 [Hylemonella gracilis ATCC 19624]
          Length = 260

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 123/253 (48%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  S+   +G        F   +         +  Q++ +G   + ++++     G
Sbjct: 8   DVGYAVRSKLVDIGRATRLFIRFWQLARPTFRRFGLVSEQIHLLGNHSLAIIVVSGLFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG + L  FG+E     ++++  +RE+G ++ A++ AGR+G+++ AEIG +K  E
Sbjct: 68  FVLGLQGYYILVDFGSEQALGQMVTLSLVRELGPVVAALLFAGRAGTSLTAEIGLLKAGE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +++A+  M +D V+ +++PR WA +I+LPLLT + +   ++G  +V      I    F+ 
Sbjct: 128 QLNAMAMMAVDPVQRILAPRFWAGVIALPLLTAVFSAVGVLGGWVVGVVMIGIDPGAFWG 187

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +  ++ ++  ++  G+IK+      +   A+ +G+        + +  T  VV +   V+
Sbjct: 188 QMQASVSVWSDVGNGVIKSIVFGFTVSFTALLQGYEAQPTPEGVSRATTRTVVMASLAVL 247

Query: 359 IIDSLFAIFYFAI 371
            +D +     F I
Sbjct: 248 GLDFVLTALMFTI 260


>gi|296532685|ref|ZP_06895378.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296266987|gb|EFH12919.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 278

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 3/263 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG   V  + D  +    LG  +  T        + +     L+R +   G+   P
Sbjct: 18  FVAGIGAWAVAVLRDVRAATGFLGEAVVMTLSLLPRPRRLRV--GDLLRHLDEAGLRAFP 75

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           + +L+  + G ++A Q +  + Q+GAEI+   L+ I  LRE+G L+ A+++AGR+GSA  
Sbjct: 76  LTLLLGLLIGVILAFQSSIPMRQYGAEIYIPSLVGISLLRELGPLIAAIILAGRTGSAFA 135

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+M +NEE+DA+R MG+D + +L+ PR+ A ++ +P+LT+L N S +IG   V+   
Sbjct: 136 AELGTMTVNEEVDALRIMGIDPMVMLVLPRLIAAMLVMPVLTLLMNLSGLIGMGTVM-GA 194

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
              P A+  ++     TL  +  GL K+      +  +  + G + G    ++G   T  
Sbjct: 195 LGFPAALVINQLSYWLTLGTLLGGLGKSVVFGLVVAGIGCRAGLSAGRGPRAVGDAATAA 254

Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372
           VV  I   +++D LFA+ ++ +G
Sbjct: 255 VVGGIVSTVVLDGLFAVLFYRLG 277


>gi|184159620|ref|YP_001847959.1| ABC transporter [Acinetobacter baumannii ACICU]
 gi|294842631|ref|ZP_06787314.1| ABC-type transport system [Acinetobacter sp. 6014059]
 gi|183211214|gb|ACC58612.1| ABC-type transport system [Acinetobacter baumannii ACICU]
 gi|322509530|gb|ADX04984.1| ttg2B [Acinetobacter baumannii 1656-2]
 gi|323519550|gb|ADX93931.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715]
          Length = 258

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  +I +            G     + QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACEPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|317125893|ref|YP_004100005.1| hypothetical protein Intca_2777 [Intrasporangium calvum DSM 43043]
 gi|315589981|gb|ADU49278.1| protein of unknown function DUF140 [Intrasporangium calvum DSM
           43043]
          Length = 282

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 99/262 (37%), Gaps = 1/262 (0%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
                L    G+ +             L         +     +    +      +  +G
Sbjct: 9   RPLARLAGRPGRGLESLGAQMRFYVRSLAWSGRTVRRYKKEVVRLLAEVSLGTGALSVIG 68

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V V+  ++F TG  +  QG   L Q G   F+    +    REI  L+  + +A   
Sbjct: 69  -GTVGVIAFMAFFTGTEVGLQGYSALEQLGTGAFTGFFSAYFNTREIAPLVAGLALAATV 127

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G    A++G+M+I+EE+DA+  MG+  +  L++ R+ A  +++  L ++   S+      
Sbjct: 128 GCGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRMIAGFVAVVPLYVIGLLSSYAATRF 187

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           +   Y+      +   FH      +IF    K    A  I ++    G+        +G 
Sbjct: 188 IATTYFGQSEGTYDHYFHLFLPPGDIFWSFGKVMVFAVVIILIHCYYGYTASGGPAGVGV 247

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V T V  SI  + ++D   ++
Sbjct: 248 AVGTAVRTSIVAINVVDFFLSL 269


>gi|189502390|ref|YP_001958107.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497831|gb|ACE06378.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 229

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 1/229 (0%)

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF-SI 200
             ++   +K +    I +   +G+  + +V ++S   GAV   Q ++ L    A+ F   
Sbjct: 1   MFSNRVAWKTYFQQTIDECINIGICSITIVSIVSIFIGAVTCIQISYNLKSPFAQDFLVG 60

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
             +  + + E+   + A++ AG+ GS I +++GSM+I E+IDA+  MG++    L+ P+I
Sbjct: 61  FGVRNMVILELAPTVMAIIFAGKVGSNIASQLGSMRITEQIDALEVMGINPTTYLVLPKI 120

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A I   PLL IL+   AI    +       +    +            I   + K+   
Sbjct: 121 IASIFMYPLLVILSGSLAIYSGYLAAKFVLTMAAEDYIYGIRFMFEPYTIQFAIYKSIAF 180

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           A  +  +A  +GF V   + ++G+  T  V  S   ++  D +      
Sbjct: 181 AFLVSSIASYKGFYVFRGAVAVGQASTEAVTNSCIAILAADYVLTQLLL 229


>gi|157413886|ref|YP_001484752.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9215]
 gi|254526072|ref|ZP_05138124.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           str. MIT 9202]
 gi|157388461|gb|ABV51166.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9215]
 gi|221537496|gb|EEE39949.1| ABC-type transport system involved in resistance to organic
           solvents permease component [Prochlorococcus marinus
           str. MIT 9202]
          Length = 251

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 10/253 (3%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
           F     S   I G  I+         +K K     L  Q+   G   + +V++     G 
Sbjct: 6   FFKRLLSSLVIGGQAINFI-------FKGKISKNDLFEQLMESGPGSLLIVLITGIAAGT 58

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           V   Q A QL+  G       L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+
Sbjct: 59  VFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQ 118

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           I+AI  +  + V+ L+ PR+ +++I  P+  +L    A+    I    +Y +P  VF++ 
Sbjct: 119 IEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTS 178

Query: 301 FHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
             S   + T A++ + LIK+      I I+A   G         +G   T  VV ++  V
Sbjct: 179 VRSGNVSLTSADLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTV 238

Query: 358 IIIDSLFAIFYFA 370
            ++D L     F 
Sbjct: 239 SLMDVLLTQILFG 251


>gi|194324165|ref|ZP_03057939.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp.
           novicida FTE]
 gi|194321612|gb|EDX19096.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp.
           novicida FTE]
          Length = 222

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 118/220 (53%)

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
             +   I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE
Sbjct: 1   MNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRE 60

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L
Sbjct: 61  LGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPIL 120

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
            ++    AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ 
Sbjct: 121 ALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALY 180

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 181 QGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220


>gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 [Thermomonospora curvata DSM 43183]
 gi|268313500|gb|ACY99874.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 282

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 113/262 (43%), Gaps = 10/262 (3%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS------- 166
           G+ + + I    ++    G  +S      A + +  + +   + R +  V +        
Sbjct: 8   GRALARVIGKPLNRVEDFGHQLSFYARAFAWTLRVLRRYRTEVARLLAEVSLGTGGLAVI 67

Query: 167 --GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V +V  ++F TG+ +  QG   L+Q G   ++  + S    RE+  L++A+ ++   
Sbjct: 68  GGSVAIVGFMTFFTGSQVGLQGYNSLNQIGTAAYTGFVSSYFNTRELAPLVSALALSATV 127

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G    A++G+M+I++EIDA+  M +  V  L++ R+ A +I++  L ++   ++ +   +
Sbjct: 128 GCGFTAQLGAMRISDEIDALEVMAVPTVPFLVTTRLLAGMIAVIPLYVVGLLASYLATRL 187

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           ++  +Y      +   F+      +I     K    A  + ++    GF        +G 
Sbjct: 188 IVTVFYGQSTGTYDHYFNLFLPPYDILWSFGKVIVFAILVMLIHCYYGFHASGGPAGVGV 247

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  SI ++ + D    +
Sbjct: 248 AVGRAVRTSIVVINLADLFLGM 269


>gi|302338250|ref|YP_003803456.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
 gi|301635435|gb|ADK80862.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM
           11293]
          Length = 258

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 3/260 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G +++  I +           I  +  F     + +     L+ Q+ + GV  + 
Sbjct: 1   MFQELGHRVIASIRELFYACGFFLRTIKESVPFFR---RRQIGYRVLVMQLLFTGVEALG 57

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+ LI+ + G VI   G   L QFG       ++  + +RE+G LL A +I  RSG+AI 
Sbjct: 58  VISLIALILGGVIIVYGVDLLPQFGQGELIYSILITVIMRELGPLLCAFIIIARSGTAIA 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G M ++ +I+A  ++G+D +  L+ PR   +I S+ LL I  N   +I +  V    
Sbjct: 118 TELGQMVVSHQIEAYTSVGVDPISYLVVPRFLGVIFSMILLNIYFNLFGLIASFFVTSFI 177

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             IP   +     +     +I + +IK+      I + A   GF V   S  + + V   
Sbjct: 178 QPIPMRDYMYDLITHIRSVDIVSSMIKSLIFGAIIALSATYNGFRVEQSSTEVPQVVIKA 237

Query: 350 VVQSISIVIIIDSLFAIFYF 369
           VVQS  ++I+ D+L  + Y+
Sbjct: 238 VVQSFVLIIVADALITLIYY 257


>gi|307731184|ref|YP_003908408.1| hypothetical protein BC1003_3170 [Burkholderia sp. CCGE1003]
 gi|307585719|gb|ADN59117.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003]
          Length = 259

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 126/259 (48%), Gaps = 1/259 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            IG  I              G             +        + +Q+++VG   + ++ 
Sbjct: 1   MIGSLISTVGRSVLEGLGTAGYATRFFFRLLFEFFALLRRPRLVTKQIHFVGNYSLVIIA 60

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           +     G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEI
Sbjct: 61  VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G MK  E++ A+  M +D V+++++PR+WA IIS+P+L  + +   ++G  +V      +
Sbjct: 121 GLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVLGGYVVGVLLIGV 180

Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               F+S+      +  ++  G++K+     A+  VA+ +G+        + +  T  VV
Sbjct: 181 DAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRATTKTVV 240

Query: 352 QSISIVIIIDSLFAIFYFA 370
            +   V+ +D L     F+
Sbjct: 241 YASLAVLGLDFLLTALMFS 259


>gi|169632329|ref|YP_001706065.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii SDF]
 gi|239503256|ref|ZP_04662566.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii AB900]
 gi|260549862|ref|ZP_05824078.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
 gi|169151121|emb|CAO99787.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter baumannii]
 gi|193078493|gb|ABO13499.2| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC
           17978]
 gi|260407112|gb|EEX00589.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
          Length = 258

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I      A +L  +I +            G     + QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     G V+  QG   L   G+E     ++S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     I+G  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +  +    F+S   +      ++  G+IK+   A     +A+ +G+A       +   +T
Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMT 233

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             VV S   V+  D +     F 
Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256


>gi|149921452|ref|ZP_01909904.1| ABC-type transport system involved in resistance to organic
           solvents [Plesiocystis pacifica SIR-1]
 gi|149817655|gb|EDM77122.1| ABC-type transport system involved in resistance to organic
           solvents [Plesiocystis pacifica SIR-1]
          Length = 259

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 104/250 (41%), Gaps = 2/250 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             I         L   +   G      +         I Q    G   + ++ +++   G
Sbjct: 7   GLIASVERSLTKLVDFVRFVGLALRVQFTRVPPRDVFITQFVDAGWGSLALLTMLTAFAG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             ++ Q      +FG +        +  +RE+  ++ AV+   R G+ + A + +M+I+E
Sbjct: 67  LNLSVQSYASFERFGGQDLLGMFAGVGGVRELYPVMAAVVCGARIGANLAASLANMRISE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +I+A+  M +D +  LISPR+WA+ ++LPLL   A+   I  +        D+    F +
Sbjct: 127 QIEALEVMAVDPLDYLISPRLWAVTLALPLLCGYADVVGIAASYAGAVYQLDLDAGSFMT 186

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV--HSNSLGKKVTTCVVQSISIV 357
           +      L +I  G++K   M   + ++A   G++V     ++ +G      +V      
Sbjct: 187 QIQEQVGLVDIGAGMLKGLIMGWLVAVIACFHGYSVSKRDGADGVGISTNLAIVHGAVTC 246

Query: 358 IIIDSLFAIF 367
           I+++   +  
Sbjct: 247 IVVNLFLSWL 256


>gi|328675485|gb|AEB28160.1| ABC-type transport system permease protein [Francisella cf.
           novicida 3523]
          Length = 222

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/217 (29%), Positives = 117/217 (53%)

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
              I Q+  VGV+ + +++      G V++ QG + LS+FGA      ++++  LRE+G 
Sbjct: 4   RDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGP 63

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  ++S R WA +IS P+L ++
Sbjct: 64  VVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALI 123

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
               AI+   I+      I +  F+S   S+ T ++I  G+IK+   A     +A+ +G+
Sbjct: 124 FASVAILAGFILAEATLGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGY 183

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
                SN + K  T  VV     V+  D +     F 
Sbjct: 184 YCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220


>gi|56708629|ref|YP_170525.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671100|ref|YP_667657.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301425|ref|YP_001121393.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224457822|ref|ZP_03666295.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371262|ref|ZP_04987264.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis FSC033]
 gi|254875493|ref|ZP_05248203.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|56605121|emb|CAG46242.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321433|emb|CAL09625.1| ABC transporter, membrane protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049202|gb|ABO46273.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569502|gb|EDN35156.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis FSC033]
 gi|254841492|gb|EET19928.1| toluene ABC superfamily ATP binding cassette transporter
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|282159866|gb|ADA79257.1| ABC-type transporter involved in resistance to organic solvents,
           permease protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 254

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 120/235 (51%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +  +          K  +   I Q+  VGV+ + +++      G V++ QG + LS+FGA
Sbjct: 18  LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++++  LRE+G ++TA++ AGR+ S+I +EIG MK  ++I++++ M ++ +  +
Sbjct: 78  HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           +S R WA +IS P+L ++    AI+   I+      I +  F+S   S+   ++I  G+I
Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVIASDISNGII 197

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           K+   A     +A+ +G+     SN + K  T  VV     V+  D +     F 
Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252


>gi|296159550|ref|ZP_06842374.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
 gi|295890258|gb|EFG70052.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1]
          Length = 255

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 123/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I              G             +        + +Q+++VG   + ++ +    
Sbjct: 2   ISAIGRSVLDGLGTAGYATRFFFRLLLEFFALLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK 
Sbjct: 62  VGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M +D V+++I+PR+WA IIS+P+L  + +   + G  +V      +    F
Sbjct: 122 GEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLLIGVDAGAF 181

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+      +  ++  G++K+     A+  VA+ +G+        + +  T  VV +   
Sbjct: 182 WSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTKTVVYASLA 241

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F+
Sbjct: 242 VLGLDFLLTALMFS 255


>gi|91785391|ref|YP_560597.1| ABC transporter inner membrane protein [Burkholderia xenovorans
           LB400]
 gi|91689345|gb|ABE32545.1| Putatitive ABC transporter, inner membrane subunit, toluene
           tolerance Ttg2B-like protein [Burkholderia xenovorans
           LB400]
          Length = 255

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 123/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I              G             +        + +Q+++VG   + ++ +    
Sbjct: 2   ISAIGRSVLDGLGTAGYATRFFFRLLLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK 
Sbjct: 62  VGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M +D V+I+I+PR+WA IIS+P+L  + +   + G  +V      +    F
Sbjct: 122 GEQLTAMEMMAVDPVKIVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLLIGVDAGAF 181

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+      +  ++  G++K+     A+  VA+ +G+        + +  T  VV +   
Sbjct: 182 WSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTKTVVYASLA 241

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F+
Sbjct: 242 VLGLDFLLTALMFS 255


>gi|315635512|ref|ZP_07890778.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
 gi|315480270|gb|EFU70937.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
          Length = 285

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 12/266 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
                 W    +  I   +   +    ++    +D + +   D+     ++ F+  +  K
Sbjct: 18  LTLLNIWDKQTLPNIIKKIE--LLNFSKNSKLSIDFANLKGCDSSAIIYLISFLNTFEEK 75

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128
                 + + E++F      ++ K+  ++ +  FF          +GKK      +S   
Sbjct: 76  NITILNNKNHEKIFDFYKKHYQTKLLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G V         +  K +    ++++ +       + +V + SF+ G VIA QG+ 
Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL +FGA IF ++++SI   REI  L+TA++IAGRS S+  AEIG+MKI EEIDA++TM 
Sbjct: 186 QLEKFGANIFIVEMISITMFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245

Query: 249 LDFVRILISPRIWALIISLPLLTILA 274
            +    L  PRI+AL ISLPLL    
Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFC 271


>gi|121603597|ref|YP_980926.1| hypothetical protein Pnap_0686 [Polaromonas naphthalenivorans CJ2]
 gi|120592566|gb|ABM36005.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans
           CJ2]
          Length = 260

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 116/251 (46%), Gaps = 1/251 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                + S    LG          A+          +  Q++++G   + ++ +     G
Sbjct: 8   DVGFATRSWLANLGYGCRLFLRLLATFGSSFKRFGLVRDQIHFLGNYSLVIIAISGLFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   QG + L +FG+      L++   +RE+G ++TA++ AGR+G+++ AEIG MK  E
Sbjct: 68  FVFGLQGYYTLLRFGSTEALGQLVTFTLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +I  +  M +D ++ +++PR W  +I++PLL  + +   +IG  +V      +    F+S
Sbjct: 128 QISVMEMMAVDPIQRILAPRFWGGVITMPLLAAVFSAMGVIGGWVVGVLMLGVDSGSFWS 187

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +   +  +  ++  G++K+      +  +A+ +GF        +    T  VV +   V+
Sbjct: 188 QIQGSVDVWRDVGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTVVVASLAVL 247

Query: 359 IIDSLFAIFYF 369
            +D +     F
Sbjct: 248 ALDFILTAMMF 258


>gi|121593173|ref|YP_985069.1| hypothetical protein Ajs_0749 [Acidovorax sp. JS42]
 gi|222109932|ref|YP_002552196.1| hypothetical protein Dtpsy_0717 [Acidovorax ebreus TPSY]
 gi|120605253|gb|ABM40993.1| protein of unknown function DUF140 [Acidovorax sp. JS42]
 gi|221729376|gb|ACM32196.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 260

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 128/261 (49%), Gaps = 8/261 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
            H+G  +   + D    A +   ++   G+        +        Q++++G   + ++
Sbjct: 7   THVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVR-------DQVHFLGNYSLSII 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            +     G V+A QG   L  +G+      ++++  +RE+G ++TA++ AGR+G+++ AE
Sbjct: 60  AMSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAE 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG M+  E++ A+  M +D VR +++PR W  +I++PLL ++ N   +IG  +V      
Sbjct: 120 IGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLALVFNAVGVIGGWLVGVVLIG 179

Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
           +    F+ +  S   +  ++  G++K+     A+  +A+ +GF        + +  T  V
Sbjct: 180 VDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTV 239

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
           V +   V+ +D +     F+I
Sbjct: 240 VMASLSVLGLDFVLTALMFSI 260


>gi|326775351|ref|ZP_08234616.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326655684|gb|EGE40530.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 290

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 38  LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   ++ A++I+G +GSAI A++GS KI EE+DA+
Sbjct: 98  QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F + 
Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 278 TAIYLQI 284


>gi|182434833|ref|YP_001822552.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463349|dbj|BAG17869.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 290

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 38  LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   ++ A++I+G +GSAI A++GS KI EE+DA+
Sbjct: 98  QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F + 
Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 278 TAIYLQI 284


>gi|124515845|gb|EAY57354.1| probable ABC transporter, permease [Leptospirillum rubarum]
          Length = 251

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 111/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G       +               + QM  +GV  +P+V L S   G  +A 
Sbjct: 1   MLDLFQSMGDFTLMVSKSFRYMVT-HFRTGDTLIQMDRIGVGSIPIVFLASIFAGLDMAL 59

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    ++ +GA      +++   +R++G +L +++++ R  + I +E+G M   ++IDA+
Sbjct: 60  QFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDAL 119

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG+D +  L++PRI+A I+ +P+L+I  +F A++    +      +P  +F+S     
Sbjct: 120 RVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRDA 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  N+    +K  F    +  +    G      +  +GK  T  VV +   +++ + L 
Sbjct: 180 LTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFLL 239

Query: 365 AIFYFAI 371
           +     +
Sbjct: 240 SKLLINV 246


>gi|312141010|ref|YP_004008346.1| integral membrane protein yrbe4a [Rhodococcus equi 103S]
 gi|325675353|ref|ZP_08155037.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|311890349|emb|CBH49667.1| putative integral membrane protein YrbE4A [Rhodococcus equi 103S]
 gi|325553324|gb|EGD23002.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 264

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 116/258 (44%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G      +          G ++    +   +++K        I Q +++    +    L
Sbjct: 1   MGGTRASLMKPVNGALTQAGNIVQLFVDVVRNTFKRPFQFKEFIEQAWFIASVTILPTAL 60

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++   GAV++ Q    + Q GAE F+     +  +++   ++TA++IAG +GSA+ A++G
Sbjct: 61  VAIPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPIVTALLIAGAAGSAVTADLG 120

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           S  I EEIDA+  +G++ V+ L+ PR+ A+++   LL  L +   I G            
Sbjct: 121 SRTIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVSVVGIAGGYFFNVILQGGT 180

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              + + F + A L +++   +KA       G++A  +G         +G+ V   VV +
Sbjct: 181 PGAYLASFSALAQLPDLYIAEVKAAIFGVIAGVIAAYKGLTPKGGPKGVGEAVNQAVVIT 240

Query: 354 ISIVIIIDSLFAIFYFAI 371
             ++   + +  + Y  I
Sbjct: 241 FLVLFFANLILTMVYLQI 258


>gi|303256524|ref|ZP_07342538.1| toluene tolerance ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|331000622|ref|ZP_08324280.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis
           YIT 11859]
 gi|302860015|gb|EFL83092.1| toluene tolerance ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|329571184|gb|EGG52889.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis
           YIT 11859]
          Length = 263

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 8/268 (2%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
              N    +G   +  +    + +  L  ++ N G                ++Q+Y+VG 
Sbjct: 3   GIFNWISSVGAWALSGVRTLGNFSRFLFRLVVNLGPSFTR-------FQDTLKQLYFVGN 55

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G V+  QG + LS +G+E     L+++  LRE+G ++TA++ AGR+G
Sbjct: 56  YSLVIILVSGLFVGFVLGLQGDYVLSSYGSEQALGVLVALSLLRELGPVVTALLFAGRAG 115

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +++ AEIG M   E++ A+  MG+D +R ++ PR  A +IS+PLL I+ +   IIG+ +V
Sbjct: 116 TSLTAEIGLMNAGEQLSALEMMGVDPIRRILGPRFLACVISMPLLAIMFSAVGIIGSWVV 175

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
                 +    F+++  +   +  +I  G+IK      A+G +A+ EG+        +  
Sbjct: 176 AVPLIGLDSGAFWAQMQAGVEVGPDIGNGIIKTFVFGVAVGAIALYEGYTARATPEGVSS 235

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAIG 372
             T  VV S  +V+ +D +   F F  G
Sbjct: 236 ATTRTVVVSSLVVLGLDFILTAFMFTHG 263


>gi|254392558|ref|ZP_05007736.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197706223|gb|EDY52035.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 255

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 109/246 (44%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +  H  G   + T E   S ++    L   I Q ++V    +    L+S   GAVIA Q
Sbjct: 4   LASLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIALQ 63

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
                 Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+ 
Sbjct: 64  VGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAME 123

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            MG+  ++ L+ PR+ A ++   LL  + +    +G         D     + + F + A
Sbjct: 124 VMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSALA 183

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L +++    KA       G+VA   G         +G  V   VV +  ++  ++ +  
Sbjct: 184 QLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMIIT 243

Query: 366 IFYFAI 371
             Y  +
Sbjct: 244 AIYLQV 249


>gi|330444642|ref|YP_004377628.1| ABC transporter permease [Chlamydophila pecorum E58]
 gi|328807752|gb|AEB41925.1| ABC transporter, permease protein [Chlamydophila pecorum E58]
          Length = 271

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 113/249 (45%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
            F          L   +        S    K    ++  Q Y +GVS +PVVIL   +TG
Sbjct: 19  NFCRALFLFPIGLSRWLGFNFAVVKSFSFKKCLFHAVCVQGYAIGVSSLPVVILTGVITG 78

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A Q  +QL  +G        +    L EIG +LTA+ ++GR G AI A +G++++ E
Sbjct: 79  VVLALQSYYQLGVYGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAIAAFLGTLRMTE 138

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +I A+ ++G++ +     PRI A II++P L I+A +S I    ++    + IP   ++ 
Sbjct: 139 QISAMSSLGVNPLEYFALPRIIAGIITMPALVIIAVWSGIFSGYMICRYAFQIPSQEYWY 198

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                    ++F  ++K+      I  +A  +G         + +  T  VV S   +I 
Sbjct: 199 MVAGHILPFDVFMVIVKSLIFGFFITSLACYQGLGRYRRITGVTEVTTEGVVISYVSIIF 258

Query: 360 IDSLFAIFY 368
           I+ +    +
Sbjct: 259 INCVITTIF 267


>gi|89901707|ref|YP_524178.1| hypothetical protein Rfer_2936 [Rhodoferax ferrireducens T118]
 gi|89346444|gb|ABD70647.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118]
          Length = 260

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                +  Q   LGL          +          +  Q++++G   + ++ +     G
Sbjct: 8   DIGFAARGQLANLGLGARLFIRLLTTLGPSFKRFGLIRDQIHFLGNYSLAIIAVSGLFVG 67

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   QG + L ++G+      L+++  +RE+G ++TA++ AGR+G+++ AEIG MK  E
Sbjct: 68  FVFGLQGYYTLQRYGSSSALGLLVTLTLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 127

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           +I  +  M +D V+ +++PR WA +I++PLL  + +   IIG  +V      +    F+S
Sbjct: 128 QISVMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAMGIIGGWVVGVLMIGVDGGSFWS 187

Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
           +      +  ++  G++K+      +  +A+ +GF        +    T  VV +   V+
Sbjct: 188 QIQEGVDVWQDLGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTVVVASLAVL 247

Query: 359 IIDSLFAIFYFAI 371
            +D +     F +
Sbjct: 248 GLDFILTAMMFTV 260


>gi|206602089|gb|EDZ38571.1| Probable ABC transporter, permease [Leptospirillum sp. Group II
           '5-way CG']
          Length = 251

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 111/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G       +               + QM  +GV  +P+V L S   G  +A 
Sbjct: 1   MLDLFQSMGDFALMVSKSFRYMVT-HFRTGDTLIQMDRIGVGSIPIVFLASIFAGLDMAL 59

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    ++ +GA      +++   +R++G +L +++++ R  + I +E+G M   ++IDA+
Sbjct: 60  QFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDAL 119

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG+D +  L++PRI+A I+ +P+L+I  +F A++    +      +P  +F+S     
Sbjct: 120 RVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRDA 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  N+    +K  F    +  +    G      +  +GK  T  VV +   +++ + L 
Sbjct: 180 LTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFLL 239

Query: 365 AIFYFAI 371
           +     +
Sbjct: 240 SKLLINV 246


>gi|311744833|ref|ZP_07718629.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311311950|gb|EFQ81871.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 292

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 104/280 (37%), Gaps = 1/280 (0%)

Query: 87  FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
                +   QK  R             +G  +            ++  V      +    
Sbjct: 1   MATDTQQDPQKDARPSLVQRASAAPVKLGNGLDDLGKQMLFYLRVIKSVPRTIKNYSREI 60

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           ++    +      +  VG   V V+  + F TG  +  QG   L Q G    S  + +  
Sbjct: 61  FRLLAEVTFGSGSLALVG-GTVGVIAAMCFFTGTEVGLQGYAALDQLGTSALSGFVSAYF 119

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
             REI  ++  + +A   G    A++G+M+I+EE+DA+  M +  +  L++ R+ A +I+
Sbjct: 120 NTREIAPIVAGIALAATVGCGFTAQLGAMRISEEVDALEVMAIPSLPFLVTTRVIAGLIA 179

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +  L I+   S+     + + + Y      +   F +     ++     K    A  + +
Sbjct: 180 VIPLYIVGLLSSYFATRLTVTQVYGQSSGTYDHYFTTFLPPGDVLWSFAKVLIFAVVVIL 239

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +    G+        +G  V   V  SI  + ++D L ++
Sbjct: 240 IHCYYGYYASGGPAGVGVAVGLAVRTSIVAINVVDLLASM 279


>gi|28199532|ref|NP_779846.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
 gi|71274637|ref|ZP_00650925.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71899306|ref|ZP_00681467.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71899651|ref|ZP_00681805.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|170730903|ref|YP_001776336.1| toluene tolerance protein [Xylella fastidiosa M12]
 gi|182682267|ref|YP_001830427.1| hypothetical protein XfasM23_1749 [Xylella fastidiosa M23]
 gi|28057647|gb|AAO29495.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
 gi|71164369|gb|EAO14083.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon]
 gi|71730603|gb|EAO32680.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|71730932|gb|EAO33002.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1]
 gi|167965696|gb|ACA12706.1| toluene tolerance protein [Xylella fastidiosa M12]
 gi|182632377|gb|ACB93153.1| protein of unknown function DUF140 [Xylella fastidiosa M23]
 gi|307578543|gb|ADN62512.1| hypothetical protein XFLM_02565 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 249

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    LG           SS   + F   LIR++Y +G   +P++ +     G V+  
Sbjct: 3   LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS++ AE+  M+  ++I A+
Sbjct: 63  QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA ++++PLLT +    AI            I   +F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182

Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSALLF 248


>gi|187925542|ref|YP_001897184.1| hypothetical protein Bphyt_3570 [Burkholderia phytofirmans PsJN]
 gi|187716736|gb|ACD17960.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN]
          Length = 255

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 123/254 (48%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I              G             +        + +Q+++VG   + ++ +    
Sbjct: 2   ISAIGRSVIGGLGTAGYATRFFFRLLLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK 
Sbjct: 62  VGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M +D V+++++PR+WA IIS+P+L  + +   + G  +V      +    F
Sbjct: 122 GEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLLIGVDAGAF 181

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+      +  ++  G+IK+     A+  VA+ +G+        + +  T  VV +   
Sbjct: 182 WSQMQGGVDVWRDVGAGVIKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTKTVVYASLA 241

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F+
Sbjct: 242 VLGLDFLLTALMFS 255


>gi|78188458|ref|YP_378796.1| putative ABC transport system permease protein [Chlorobium
           chlorochromatii CaD3]
 gi|78170657|gb|ABB27753.1| putative ABC transport system permease protein [Chlorobium
           chlorochromatii CaD3]
          Length = 264

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 118/251 (47%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I K    +      +      +     +  K   +   +  Q    G   +P+V++ S 
Sbjct: 9   SINKLSAQAKEFFFTMQEFFLFSLRAFMAIPKMGRYWRDVFDQATICGTDSIPIVLVSSI 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GA++A +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+M+
Sbjct: 69  SIGALLAVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQ 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+E+IDA+R  G D V  L+ PR+ A ++    LT L++F+ +  A+ +   Y+ I   +
Sbjct: 129 ISEQIDALRAFGTDPVAKLVMPRLVAALVMFLPLTALSDFAGLQSAAYMAEHYHHIDAGI 188

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F++  +    L +   G +KAP  A  I +V+   GF     +  +G+     +V S  +
Sbjct: 189 FWNAVYPRLVLKDFVLGFLKAPVFAVIITLVSSFNGFNARGGTAGVGRATIKGIVVSSGL 248

Query: 357 VIIIDSLFAIF 367
           V+I +   +  
Sbjct: 249 VLIANFYVSKL 259


>gi|29832443|ref|NP_827077.1| ABC transporter integral membrane protein [Streptomyces avermitilis
           MA-4680]
 gi|29609562|dbj|BAC73612.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 267

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 7/261 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVV 171
            ++  + +  SQ    G  ++ TG         K  L  L    +  G   V      V+
Sbjct: 2   ALLNRLEELGSQLSFYGRSLAWTGRTVRRYK--KEILRLLAEVSFGRGALAVVGGTVGVI 59

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             +SF TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+   A+
Sbjct: 60  AFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQ 119

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+   A  +   YY 
Sbjct: 120 LGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYYG 179

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
                +   F       ++     K    A  I +V    G+        +G  V   V 
Sbjct: 180 QSAGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYYASGGPAGVGVAVGRAVR 239

Query: 352 QSISIVIIIDSLFAIFYFAIG 372
            SI  + ++D   ++  +  G
Sbjct: 240 TSIVAINVLDFFLSLAIWGAG 260


>gi|121609355|ref|YP_997162.1| hypothetical protein Veis_2398 [Verminephrobacter eiseniae EF01-2]
 gi|121553995|gb|ABM58144.1| protein of unknown function DUF140 [Verminephrobacter eiseniae
           EF01-2]
          Length = 260

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 130/264 (49%), Gaps = 8/264 (3%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           +     +G  +   + D    A +L  ++   G  C      +        Q++++G   
Sbjct: 3   RQPIADLGFAVRSKLADIGMAARLLARLLLLAGAVCRRPALVR-------DQLHFLGNYS 55

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + ++++     G V+  QG + L ++GA      L+++  +RE+G ++TA++ AGR+G++
Sbjct: 56  LAIIVVSGLFVGFVLGLQGYYTLQRYGASEALGLLVALSLVRELGPVVTALLFAGRAGTS 115

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + AEIG M+  E++ A+  M +D VR +++PR WA +I++PLL  + +   +IG ++V  
Sbjct: 116 LTAEIGLMRSGEQLSAMEMMAIDPVRRILAPRFWAGVIAMPLLAAMFSAVGVIGGAVVGV 175

Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
               I    F+S+      +  ++  G++K+      +  VA+ +G+        + +  
Sbjct: 176 LMIGIDPGAFWSQMQGGVDIWRDLGNGVLKSLVFGFTVSFVALLQGYVARPTPEGVARAT 235

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV +   V+ +D +     F+
Sbjct: 236 TRTVVLASLAVLALDFILTALMFS 259


>gi|282866015|ref|ZP_06275063.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
 gi|282559054|gb|EFB64608.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
          Length = 283

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 106/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + +K        + Q ++V    +    L+S   GAVIA 
Sbjct: 31  LLAPLRQTGQLFALALAVARAVFKRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 90

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG +GSAI A++GS KI EE+DA+
Sbjct: 91  QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 150

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G               + + F + 
Sbjct: 151 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 210

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++ G +KA       GIVA   G         +G  V   VV +  ++  ++   
Sbjct: 211 AQLPDLYIGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMAL 270

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 271 TAIYLQI 277


>gi|15837022|ref|NP_297710.1| toluene tolerance protein [Xylella fastidiosa 9a5c]
 gi|9105260|gb|AAF83230.1|AE003893_7 toluene tolerance protein [Xylella fastidiosa 9a5c]
          Length = 249

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    LG           SS   + F   LIR++Y +G   +P++ +     G V+  
Sbjct: 3   LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS++ AE+  M+  ++I A+
Sbjct: 63  QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D +   ++PR WA I+++PLLT +    AI            I   +F+S   ++
Sbjct: 123 ELMAIDPIAKAVAPRFWAAILTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182

Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 LSALLF 248


>gi|238918531|ref|YP_002932045.1| hypothetical protein NT01EI_0581 [Edwardsiella ictaluri 93-146]
 gi|238868099|gb|ACR67810.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 235

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 1/234 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     +       L RQ+Y VGV  + ++I+     G V+  QG   L+ + AE 
Sbjct: 1   MLFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEA 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +++
Sbjct: 61  SLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVA 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIK 316
           PR WA +IS+PLLT++     I G S+V   +  I    F+S          ++   LIK
Sbjct: 121 PRFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGFFWSAMQGAVDYRTDLLNCLIK 180

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   A  +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 181 SLIFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 234


>gi|225010488|ref|ZP_03700959.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-3C]
 gi|225005317|gb|EEG43268.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-3C]
          Length = 245

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 2/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G       E      ++K     +++++  +    + +VI +SF  G V+  Q A 
Sbjct: 4   LAAIGQYFLMIREVFKKPTRWKVMRGLILKEIDELIYGSMGIVIFVSFFIGGVVTIQTAL 63

Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            L+     +           + E     T++++AG+ GS I + IGSM++ E+IDA+  M
Sbjct: 64  NLNSPLIPKNLIGFAARQSVILEFAPTFTSIIMAGKVGSFITSSIGSMRVTEQIDALEVM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ +  L+ P+I AL +  P +  +A +  I G  +          A F          
Sbjct: 124 GINSLNYLVFPKIIAL-LMYPFVIAIAMYLGIFGGFLAGVFGGFSTAADFIEGVRIDFVP 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++    IK  F A  I  V    G+ +   +  +GK  TT  V +  ++I  + +    
Sbjct: 183 FHVAYAFIKTMFFAFIIATVPSFHGYYMKGGALEVGKASTTSFVWTAVVIITTNYILTQL 242

Query: 368 YFA 370
              
Sbjct: 243 LLG 245


>gi|84494808|ref|ZP_00993927.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
 gi|84384301|gb|EAQ00181.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
          Length = 276

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 9/232 (3%)

Query: 144 ASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFG 194
            S    + +   ++R +  V +           V V+  ++F TG+ +  QG   L+Q G
Sbjct: 32  WSPRTIRRYKKEILRLLAEVSLGSGALSVIAGTVGVLTFMAFFTGSQVGLQGYSSLNQLG 91

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
              F+  L + L  REI  L+  + +A   G    A++G+M+I+EE+DA+  MG+  +  
Sbjct: 92  TGAFAGFLAAYLNTREIAPLVAGLSLAATVGCGFTAQLGAMRISEEVDALEVMGIPSLPF 151

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L++ R+ A  I++  L ++   S+      ++  Y+      +   FH      +IF   
Sbjct: 152 LVTTRMIAGFIAVIPLYVIGLLSSYAATRFIVTDYFGQSKGTYDHYFHLFLPPIDIFYSF 211

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +K    A  I ++    G+        +G  V   V  SI  V ++D  F++
Sbjct: 212 LKVLVFAVIIILIHCYYGYTASGGPAGVGVAVGKAVRTSIVAVNLVDFFFSL 263


>gi|307544520|ref|YP_003896999.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216544|emb|CBV41814.1| probable ABC-type transport system permease protein [Halomonas
           elongata DSM 2581]
          Length = 260

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 2/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           ++I +     C+    LG       +        +G     +RQM++VGV  + +V++  
Sbjct: 3   ERIARLGRWGCNTLESLGDAGIFLVQSMFGKPSAEGM-RLWLRQMHFVGVMSLAIVLVSG 61

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+A QG   L  FGAE     ++++  LRE+  ++ A++ AGR+GSA+ AEIG M
Sbjct: 62  LFIGMVLALQGYTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ ++  +G+D +R +++PR+WA  ++LPLLTI      + G  +V  ++  +   
Sbjct: 122 KATEQLTSMEMIGVDPLRRVVAPRLWAGFVALPLLTIGFGVVGVWGGQLVGVQWLGVFEG 181

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++    ++    A++  GLIK+   A  +  +A+ +G+A+   S  + +  T  VV + 
Sbjct: 182 SYWGNMQASVDFIADVGNGLIKSLVFALVVTWIAVYQGYALVPTSEGISRATTRTVVYAS 241

Query: 355 SIVIIIDSLFAIFYFA 370
             V+ +D +     F 
Sbjct: 242 LAVLGLDFILTAVMFG 257


>gi|319778667|ref|YP_004129580.1| Uncharacterized ABC transporter, permease component YrbE
           [Taylorella equigenitalis MCE9]
 gi|317108691|gb|ADU91437.1| Uncharacterized ABC transporter, permease component YrbE
           [Taylorella equigenitalis MCE9]
          Length = 258

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I +      S    +G           +          +I Q++++G   + ++ +  
Sbjct: 3   KFISRIGELIISAICAVGAFARLMWSVFLNVAFIFKRPSLVIEQLHFIGNHSLIIIAVSG 62

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G V+  QG   LS +G+E     ++S+   RE+G ++TA++ AGR+G+A  AEIG M
Sbjct: 63  LFVGFVLGLQGYHTLSMYGSEESLGLVVSLALTRELGPVVTALLFAGRAGTATTAEIGLM 122

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           K  E++ A+  MG++ +R ++ PR W   I++P+L  + +   ++G  +V     D+   
Sbjct: 123 KSGEQLAAMDVMGINPIRRILVPRFWGGTIAMPILATIFSAIGVVGGWVVGVVLIDVDSG 182

Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            F+S+  S   +  +I  G IK+     A+ ++A+ EG+        + K  T  VV+S 
Sbjct: 183 SFWSQMQSGTDIVEDILNGFIKSVVFGVAVMLIALFEGWYSVPTPEGVAKATTHTVVKSS 242

Query: 355 SIVIIIDSLFAIFYF 369
             V+ +D L     F
Sbjct: 243 LCVLGLDFLLTAVMF 257


>gi|209516602|ref|ZP_03265456.1| protein of unknown function DUF140 [Burkholderia sp. H160]
 gi|209503043|gb|EEA03045.1| protein of unknown function DUF140 [Burkholderia sp. H160]
          Length = 255

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 125/254 (49%), Gaps = 1/254 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I        S     G             +        + +Q+++VG   + ++ +    
Sbjct: 2   ISAIGRAVMSGLGTAGYATRFFLRLLLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L+++G+E     L+++  +RE+G ++TA++ AGR+G+++ AEIG MK 
Sbjct: 62  VGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M +D V+++I+PR+WA I+S+P+L  + +   ++G  +V      +    F
Sbjct: 122 GEQLTAMEMMAVDPVKVVIAPRLWAGIVSMPILAAIFSAVGVLGGYVVGVLLIGVDAGAF 181

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S+      +  ++  G++K+     A+  VA+ +G+        + +  T  VV +   
Sbjct: 182 WSQMQGGVDVWKDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTRTVVYASLA 241

Query: 357 VIIIDSLFAIFYFA 370
           V+ +D L     F+
Sbjct: 242 VLGLDFLLTALMFS 255


>gi|282895910|ref|ZP_06303950.1| Putative uncharacterized protein [Raphidiopsis brookii D9]
 gi|281199155|gb|EFA74024.1| Putative uncharacterized protein [Raphidiopsis brookii D9]
          Length = 238

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 1/229 (0%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
              + K    + + Q+  VG   + + +L +   GAV   Q A +   FGA      +++
Sbjct: 4   HLIRGKIHRRNTVEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLA 63

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
           +   RE+  +LTAV++AGR GSA  AEIG+M++ E+IDA+  +  D +        + L 
Sbjct: 64  VALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFFSHTSSFGLF 123

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           I+     +       +G  I+    Y++   VF     +   L +I + +IKA      I
Sbjct: 124 INATNFDLAIPGYWNVGRLIIATNLYNLSDTVFLDSARNFLDLRDIISAMIKAACFGILI 183

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372
            I+    G      +  +G+  TT VV ++ ++ I +   + + +   G
Sbjct: 184 AIIGCSWGLTTTGGAKGVGQSTTTAVVTALLVIFISNFFLSWLMFQGAG 232


>gi|284034024|ref|YP_003383955.1| hypothetical protein Kfla_6153 [Kribbella flavida DSM 17836]
 gi|283813317|gb|ADB35156.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836]
          Length = 257

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 112/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   +S +    L   ++Q ++V    +    L++   GAVIA Q    + Q
Sbjct: 13  GSLFAFALDTARASVRRPFQLREFLQQAWFVASVTIIPTALVAIPFGAVIALQVGGLIQQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA+ F+     +  +RE   + TA++IAG  GSAI A++GS KI EE+DA+  +G+D +
Sbjct: 73  FGAQAFTGSAAVLAVVREASPIATALLIAGAGGSAICADLGSRKIREELDAMMVLGIDPI 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+ A ++    L    +   ++G  +      D     + + F + A L +++ 
Sbjct: 133 HRLVVPRVLATMLVAFFLNGFVSVVGVMGGYVFNVVLQDGTPGAYIASFTALAHLPDLWQ 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G  KA        +VA  +G   G     +G  V   VV +  ++ + +      YF +
Sbjct: 193 GQAKALVFGFIAAVVASYKGVNAGGGPKGVGDAVNQSVVITFMLLFVANFSMTAIYFQL 251


>gi|54027083|ref|YP_121325.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018591|dbj|BAD59961.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 264

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 109/239 (45%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G V +   +     ++        I Q +++    +    L++   GAV+A Q    + Q
Sbjct: 20  GNVFALFVDVLRKMFRRPFQWREFIEQSWFIASVSILPSALVAIPFGAVVALQTGSLIKQ 79

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GAE ++     +  +++   ++TA++IAG +GSA+ A++GS  I EEIDA+  +G+D +
Sbjct: 80  LGAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLGSRTIREEIDAMEVLGVDPI 139

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR+  + +   LL  L +   I G               + S F + A L +++ 
Sbjct: 140 ARLVVPRVLGMTLVAVLLNGLVSVVGIAGGYFFNVLLQGGTPGAYLSSFSALAQLPDLWI 199

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           G IKA       G++A  +G         +G  V   VV +  ++  ++ +  + Y  +
Sbjct: 200 GEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVITFLVLFFVNLILTLVYLQV 258


>gi|296089608|emb|CBI39427.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 23/236 (9%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           V    G+        K   ++ ++Q+  VG   V V IL +   G     Q   + ++ G
Sbjct: 107 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 166

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+                         ++E+ D +R +G + V  
Sbjct: 167 LNRSVGGVLALAFSRELSP-----------------------VSEQTDTLRVLGTNPVDY 203

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L++PR+ A  I+LP LT+L     +  ++++    Y I   +            +I + +
Sbjct: 204 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 263

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           IK+      I  V+   G      +  +G+  T+ VV S+  + I D   +  +F 
Sbjct: 264 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 319


>gi|332043098|gb|EGI79296.1| protein of unknown function DUF140 [Lacinutrix algicola 5H-3-7-4]
          Length = 245

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
               H +G       E      K+      +++ +  + +  + +V  I+F  G VI  Q
Sbjct: 1   MQYLHNIGSYFLMIVEMFRKPTKWSVMKQLILKDIDDLIIGSLGIVAFIAFFVGGVITIQ 60

Query: 186 GAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  +       +          + E      ++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNIDNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+  A+++  P +  +A F  I G               F +     
Sbjct: 121 EVMGINSINYLVFPKFVAMML-YPFVISIAMFLGIFGGLTACVLGGYSSVEDFITGVQID 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK    A  +  +    G+ +   +  +G+  TT  V +   +I+++ L 
Sbjct: 180 LIPFHVAYAFIKTIIFAFILATIPSYHGYFMKGGALEVGEASTTSFVWTSVAIILLNYLL 239

Query: 365 AIFYFA 370
                +
Sbjct: 240 TQMLLS 245


>gi|134103293|ref|YP_001108954.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291004488|ref|ZP_06562461.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133915916|emb|CAM06029.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 263

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 109/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G + +   +   +  K    +   ++Q +++    +    L++   GAVIA Q 
Sbjct: 13  GGIRETGRLFALMLDVGRALPKRPFQVREFVQQCWFIASVTILPTALVAIPFGAVIALQL 72

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                Q GA+ F+     +  +++   ++TA++IAG  GSAI A++GS KI +EIDA+  
Sbjct: 73  GSLTRQIGAQSFTGGASVLAIIQQASPIVTALLIAGAGGSAICADLGSRKIRDEIDAMEV 132

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V  L+ PR+ A ++   LL  + +   ++G               + + F++ A 
Sbjct: 133 LGVSPVHRLVVPRVLAAMLVAVLLNGMVSVVGVMGGYFFNVIMQGGTPGAYMASFNALAQ 192

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +I+   +KA       G+VA   G         +G  V   VV +  ++  ++ +   
Sbjct: 193 LPDIWISELKALIFGFLAGVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFAVNFVLTT 252

Query: 367 FYFAI 371
            Y  +
Sbjct: 253 IYLQL 257


>gi|60683336|ref|YP_213480.1| hypothetical protein BF3899 [Bacteroides fragilis NCTC 9343]
 gi|60494770|emb|CAH09576.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
 gi|301164825|emb|CBW24385.1| putative membrane protein [Bacteroides fragilis 638R]
          Length = 254

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 1/250 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           I         +G  I   G   +   + + F    I+++  +GV+ + +V+LISF  GAV
Sbjct: 5   IRVMIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAV 64

Query: 182 IAQQGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           I  Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++
Sbjct: 65  ITIQIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 124

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +        
Sbjct: 125 IDALEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYG 184

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                    ++ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  
Sbjct: 185 LQYMFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFA 244

Query: 361 DSLFAIFYFA 370
           D +       
Sbjct: 245 DLVLTKLLMG 254


>gi|302551013|ref|ZP_07303355.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468631|gb|EFL31724.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 256

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 112/246 (45%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                  G + +   +   +  +        I+Q ++V    +    L+S   GAVIA Q
Sbjct: 6   VGALRHSGSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTIMPTALVSIPFGAVIALQ 65

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
                 Q GA+ FS     +  LRE   ++TA++IAG  G+AI A++G+ KI +EIDA++
Sbjct: 66  IGSLTRQLGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIRDEIDAMQ 125

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            +G+D V  L+ PR+ A ++   LL  L +   + G         +     + + F + A
Sbjct: 126 VLGIDPVHRLVVPRVLASMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLA 185

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L++++   +KA       GIVA  +G         +G  V   VV +  ++ + + +  
Sbjct: 186 QLSDLWAAEVKALVFGAIAGIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMT 245

Query: 366 IFYFAI 371
             YF +
Sbjct: 246 AVYFQV 251


>gi|239931478|ref|ZP_04688431.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291439854|ref|ZP_06579244.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291342749|gb|EFE69705.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 254

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 106/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q ++V    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVSRAIFRRPFQFREFVEQFWFVAGVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G         D     + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVLQDGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A  A+++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQPADLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TALYLQI 248


>gi|332169298|gb|AEE18553.1| protein of unknown function DUF140 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 245

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S  H +G              K K     + +++  + +  + +V  ISF  GAV+A Q
Sbjct: 1   MSYLHSIGEYFLMIKNTFVKPTKGKVLRDLIFKEIDDLIIGSLGIVAFISFFVGAVVAIQ 60

Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L+                 + E      +V++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNLNNPLLPKSLIGFAARQSIILEFAPTFVSVIMAGKVGSFITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I A++I  P L  +  F  IIGA          P   F S     
Sbjct: 121 EVMGINSLNYLVFPKIVAMLI-YPFLIAIGMFLGIIGAYTAAVYGGFAPSNDFLSGLQQD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +F    K    A  +  +    G+ +   +  +GK  TT  V +   +I+++ + 
Sbjct: 180 FIPFQLFYAFFKTFLFAFLLATIPAYHGYYMRGGALEVGKASTTSFVWTSVAIILVNFIT 239

Query: 365 AIFYFA 370
                +
Sbjct: 240 TQLLLS 245


>gi|297191126|ref|ZP_06908524.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721750|gb|EDY65658.1| ABC transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 256

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 112/246 (45%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                  G + +   +   +  K    +   I+Q ++V    +    L+S   GAVIA Q
Sbjct: 6   VGALRQSGSLFAMGLDVLRTIPKRPFQVREFIQQAWFVASVTILPTALVSIPFGAVIALQ 65

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
                 Q GA+ FS     +  LRE   ++TA++IAG  G+AI A++G+ KI EEIDA+R
Sbjct: 66  IGSLTRQLGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMR 125

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            +G+D +  L+ PR+ A ++   LL  L +   + G         +     + + F + A
Sbjct: 126 VLGIDPIHRLVVPRVLATMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLA 185

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            L++++   +KA        IVA  +G         +G  V   VV +  ++ + + +  
Sbjct: 186 QLSDLWAAELKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMT 245

Query: 366 IFYFAI 371
             YF I
Sbjct: 246 AVYFQI 251


>gi|194334499|ref|YP_002016359.1| hypothetical protein Paes_1694 [Prosthecochloris aestuarii DSM 271]
 gi|194312317|gb|ACF46712.1| protein of unknown function DUF140 [Prosthecochloris aestuarii DSM
           271]
          Length = 264

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 116/245 (47%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    +      +     +  K + +    + Q    G   +P+V++ S   GA++
Sbjct: 15  QSMKEFFLTMQEFFFFSVRAFVTLPKLRRYWRDFLDQATIAGTDSIPIVLVSSISIGALL 74

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A +    L  FGA+       ++  +RE+G LL  +M++ R GS   AE+G+MKI+E+ID
Sbjct: 75  AVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARYGSRNGAELGAMKISEQID 134

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D V  L+ PR+ A +I    LT +A+F+ +  A+ +   Y+ I   +F++   
Sbjct: 135 ALRAFGTDPVAKLVMPRLAAALIVFIPLTAIADFAGLHSAAWLAEHYHKIDPGIFWNAVF 194

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L +   G +KAP  A  I +V+   GF+    +  +G+     +V S  +++I + 
Sbjct: 195 PRLVLKDFVVGFLKAPVFAIIITLVSSFNGFSATGGTAGVGRSTIKGIVVSSGLILIANF 254

Query: 363 LFAIF 367
             +  
Sbjct: 255 YVSKI 259


>gi|302551012|ref|ZP_07303354.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468630|gb|EFL31723.1| ABC transporter integral membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 271

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 7/253 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173
           +K +    +Q    G  ++ TG         K  L  L    +  G   V      V+  
Sbjct: 8   LKALEALGTQLSFYGRSLAWTGRTLRRYK--KEVLRLLAEVSFGRGALAVVGGTVGVIAF 65

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +SF TG  +  QG   L+Q G   F   L +    REI  L+  + ++   G+   A++G
Sbjct: 66  LSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQLG 125

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I+EE DA+  MG+  +  L++ R+ A  +++  L ++   S+ + A  +   YY   
Sbjct: 126 AMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVIGLLSSYLAARTITTGYYGQS 185

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F       ++     K    A  I +V    G+        +G  V   V  S
Sbjct: 186 TGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYHASGGPAGVGVAVGRAVRTS 245

Query: 354 ISIVIIIDSLFAI 366
           I  + ++D   ++
Sbjct: 246 IVAINVLDLFLSL 258


>gi|29832444|ref|NP_827078.1| ABC transporter integral membrane protein [Streptomyces avermitilis
           MA-4680]
 gi|29609563|dbj|BAC73613.1| putative ABC transporter permease protein [Streptomyces avermitilis
           MA-4680]
          Length = 256

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 110/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G + +   +   +  +        I+Q ++V    +    L+S   GAVIA Q 
Sbjct: 7   GALRHSGSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTILPTALVSIPFGAVIALQI 66

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                Q GA+ FS     +  LRE   ++TA++IAG  G+AI A++G+ KI EEIDA++ 
Sbjct: 67  GSLTRQLGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMQV 126

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+D +  L+ PR+ A ++   LL  L +   + G         +     + + F + A 
Sbjct: 127 LGIDPIHRLVVPRVLASMVVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQ 186

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L++++    KA        IVA  +G         +G  V   VV +  ++ + + +   
Sbjct: 187 LSDLWAAEAKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTA 246

Query: 367 FYFAI 371
            YF +
Sbjct: 247 VYFQV 251


>gi|291298382|ref|YP_003509660.1| hypothetical protein Snas_0856 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567602|gb|ADD40567.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM
           44728]
          Length = 253

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 111/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G     T +   +  +        I+Q +++    +    L++   GAVIA 
Sbjct: 1   MGRMFAGVGRFTGFTIDTFKAVPRRPFQWSEAIKQAWFIASVSILPTALVAIPFGAVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GAE F+     +  +RE G ++TA++I+G  GSA+ A++G+ KI EE+DA+
Sbjct: 61  QLGSLSKQIGAESFAGAASVLAVVREAGPIVTALLISGAGGSAMCADLGARKIREELDAM 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            T+G+D ++ L+ PR++A  +    L  + +   I G  I      D     + + F + 
Sbjct: 121 ETLGVDPIQRLVVPRMFAGAVVAFFLNGVVSAVGIAGGYIFNVYMQDGTPGSYLASFAAL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +A++ +  ++A        ++A   G         +G+ V   VV +  ++   + + 
Sbjct: 181 GQVADVVSAQLRAIVFGMVAALIACYLGMNAKGGPKGVGQAVNVSVVVNFMVLFAFNFVM 240

Query: 365 AIFYFAI 371
              YF +
Sbjct: 241 VALYFQL 247


>gi|256380617|ref|YP_003104277.1| hypothetical protein Amir_6634 [Actinosynnema mirum DSM 43827]
 gi|255924920|gb|ACU40431.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827]
          Length = 260

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 113/245 (46%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G + +  G+  A+S++    +   ++Q +++    V    L+S   GAVIA Q 
Sbjct: 10  GLLRETGRLFALAGQVVAASFRRPFQVREFVQQCWFLVSVTVLPTALVSIPFGAVIALQL 69

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                Q GA+ F+     +  +++   ++TA++IAG  GSAI A++GS  I EEIDA+  
Sbjct: 70  GSLTRQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAICADLGSRTIREEIDAMEV 129

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V  L+ PR+ A ++   LL  + +   ++G         D     + + F + A 
Sbjct: 130 LGVSPVHRLVVPRVLAAMVVAVLLNGMVSVVGVMGGYFFNVVLQDGTPGAYLASFSALAQ 189

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L++++ G +KA       GIVA   G         +G  V   VV +  ++   + +   
Sbjct: 190 LSDLWIGELKALVFGFIAGIVAAYRGLNPAGGPKGVGDAVNQAVVVTFLLLFFANFVLTT 249

Query: 367 FYFAI 371
            Y  +
Sbjct: 250 IYLQV 254


>gi|21220886|ref|NP_626665.1| ABC-transporter integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|256787958|ref|ZP_05526389.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|289771845|ref|ZP_06531223.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|8247037|emb|CAB92895.1| putative ABC-transporter integral membrane protein [Streptomyces
           coelicolor A3(2)]
 gi|289702044|gb|EFD69473.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
          Length = 254

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 106/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q ++V    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVVRAVFRRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS +I EE+DA+
Sbjct: 62  QVGSLTEQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRRIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +   I+G               + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVIMQGGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYVSELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TAVYLQI 248


>gi|332107650|gb|EGJ08874.1| hypothetical protein RBXJA2T_01025 [Rubrivivax benzoatilyticus JA2]
          Length = 260

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 1/250 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +      LG       +    S         ++ Q++ +G   + +++      G V
Sbjct: 9   GRFTLEWLRALGHAAYFFVDLLRHSPAALRRFSLVVAQIHAIGNRSLVIILASGMAVGFV 68

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q  + L  +GA      ++++  +RE+G ++ A++ AGR+G+++ AEIG MK  E++
Sbjct: 69  LALQMYYALVTYGAAESLGLVVNLSLVRELGPVVAALLFAGRAGTSLTAEIGLMKAGEQL 128

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  M +D    +++PR    IIS+PLL  L +   I+GA +V      +    F+S  
Sbjct: 129 AAMELMAIDPRSRVLAPRFLGGIISMPLLAALFSAIGILGAWVVAVLLIGVDAGNFWSIM 188

Query: 302 HSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
            S+  +  ++  G++K+         VA+ +G+        +    T  VV +   V+ +
Sbjct: 189 QSSVDVWRDVGNGIVKSFVFGVICTAVALYQGYETQATPEGVAHATTRTVVIASLAVLAM 248

Query: 361 DSLFAIFYFA 370
           D L     F+
Sbjct: 249 DFLLTALMFS 258


>gi|91215158|ref|ZP_01252130.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC
           700755]
 gi|91186763|gb|EAS73134.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC
           700755]
          Length = 247

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 2/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    +G       E      K       +++++  + +S + +V+ ISF  GAVIA 
Sbjct: 2   LSNYIKSIGQYFIMIYETFRKMTKTSELKRLILQELDDLIISSLGIVVFISFFIGAVIAI 61

Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q A   S  F  +           + E      A+++AG+ GS I + IG+M+++E+IDA
Sbjct: 62  QTALNFSNPFVPKSLIGFAARQSIILEFAPTFVAIIMAGKVGSYITSSIGTMRVSEQIDA 121

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++ +  L+ P+I A+    P +  ++ F  IIGA         +    F +    
Sbjct: 122 LEVMGINSLNYLVFPKIIAMC-MFPFVIAISMFVGIIGAYTASVYGGFLSSEQFLAGLQE 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 +F   +K+   A  +  V    G+ +   S  +G+  TT  V +  I+I ++  
Sbjct: 181 DFIPFQVFYAFLKSFVFAIILATVPAFHGYYMKGGSLEVGRAATTSFVWTSVIIIFMNYF 240

Query: 364 FAIFYFA 370
                 +
Sbjct: 241 ITQLLLS 247


>gi|262370600|ref|ZP_06063925.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046]
 gi|262314400|gb|EEY95442.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046]
          Length = 259

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+++++ +      + +L  ++ +              +   + QMY VGV  +
Sbjct: 2   NAIALLGRRVIERVRGIGVASLMLLQILFSMPTALG--------VRLFVYQMYRVGVLSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++++     GAV+  Q    L  FG+E      +++  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIIVVSGLFIGAVLGLQMYSILVTFGSEAMLGTAVALTLLRELAPVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIG MK  E++ ++  +G+D ++ +ISPR+WA I SLP+L+++     I+G  +V   
Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +       ++S   S+     ++  G +IK+   A     +A+ +G+A    S  +    
Sbjct: 174 FLGADEGSYWSGIQSSVEFYKDVLNGTIIKSFVFALICTWIAVYQGYACEPTSEGIATST 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S   V+  D +     F 
Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257


>gi|123966718|ref|YP_001011799.1| putative transporter, membrane component [Prochlorococcus marinus
           str. MIT 9515]
 gi|123201084|gb|ABM72692.1| possible transporter, membrane component [Prochlorococcus marinus
           str. MIT 9515]
          Length = 251

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 3/238 (1%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+     +K K     L  Q+   G   + +V++     G V   Q A QL+  G 
Sbjct: 14  LIIGGQAINYIFKGKISKNDLFEQLMESGPGSLLIVLITGVAAGTVFNIQVASQLTSMGV 73

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 L+++   RE+  LLTA ++ G+  +A  A++G+MK+ E+I+AI  +  + ++ L
Sbjct: 74  SSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYL 133

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLANIFT 312
           + PR+ ++II  P+  +L    A+    I    +Y++P +VF++   S   + + +++ +
Sbjct: 134 VVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPSVFWTSVRSGNVSLSSSDLSS 193

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +IK+      I I+A   G         +G   T  VV ++  V ++D +     F 
Sbjct: 194 MIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251


>gi|198276177|ref|ZP_03208708.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135]
 gi|198270989|gb|EDY95259.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135]
          Length = 247

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           LG  +   G   +   +F+ +    + +M  +G++ + +V+LISF  GAVI  Q    + 
Sbjct: 8   LGKYLMLMGRVFSRPERFRMYFKQYLNEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67

Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                 F        + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  MG++
Sbjct: 68  SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 127

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
               LI P+I  L+  +P L I + F+ +IGA    W    +                 I
Sbjct: 128 SASYLILPKILGLMTMIPFLVIFSIFAGVIGAFCTAWFAGIMNATDLEYGLQYCFVEWYI 187

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +       
Sbjct: 188 WCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQLLMG 247


>gi|289641747|ref|ZP_06473905.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289508391|gb|EFD29332.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 2/241 (0%)

Query: 133 GLVISNTGEFCASSYKFK-GFLLSLIRQMYYVGVSG-VPVVILISFVTGAVIAQQGAFQL 190
           G ++   G+   S+ +   G+   +  QM+ +     +P+++  +         QG    
Sbjct: 38  GEMVQLAGQVFGSAIRHPVGYWGEVRDQMFEILKLCWIPMMVSCTAFGFGAPGLQGGNLF 97

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
             FG          +  +RE    + A+++AG  G+A+ A++G+ +I EEIDA+  +G+D
Sbjct: 98  LLFGIPERLGSFFIMASVREFAPWINAMVVAGVMGTAMTADLGARRIREEIDAMEVLGVD 157

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +R LI PR+ A+ +   LL ++A    ++G  +          + FF  F + AT+ ++
Sbjct: 158 PIRTLIVPRVLAITLMTGLLDLVALAFGVLGGYMASVWVLGANSSAFFENFFANATVTDV 217

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +  + K       IG+V   +G         +G+ V   VV S + + I + +F      
Sbjct: 218 WASVAKTTIFGLLIGVVCCYKGLHTQGGPIGVGRAVNQAVVISFAAIWIFNYVFTTILLG 277

Query: 371 I 371
           +
Sbjct: 278 L 278


>gi|126643117|ref|YP_001086101.1| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC
           17978]
          Length = 235

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
           G     + QM+ VGV  + ++ +     G V+  QG   L   G+E     ++S+  LRE
Sbjct: 13  GGFGRFVYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRE 72

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +  ++ A++ AGR+GSA+ AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+L
Sbjct: 73  LAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPML 132

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329
           T++     I+G  +V   +  +    F+S   +      ++  G+IK+   A     +A+
Sbjct: 133 TVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAV 192

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
            +G+A       +   +T  VV S   V+  D +     F 
Sbjct: 193 FQGYACDPTPEGIATAMTRTVVYSSLCVLGFDFVLTAVMFG 233


>gi|315122740|ref|YP_004063229.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496142|gb|ADR52741.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 211

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 184/211 (87%), Positives = 206/211 (97%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +GV+GVPV+ILISFVTGAVIAQQGAFQLS FGAEIF+IDLMSILQLREIGVLLTAVM+AG
Sbjct: 1   MGVTGVPVIILISFVTGAVIAQQGAFQLSNFGAEIFAIDLMSILQLREIGVLLTAVMVAG 60

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSGSAIVAEIGSMKINEEID+++T+G+D VR+LISPRIWALIISLPLLTILAN+SAI+GA
Sbjct: 61  RSGSAIVAEIGSMKINEEIDSLKTIGIDLVRVLISPRIWALIISLPLLTILANYSAIVGA 120

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
           SI++WKYYDIPF+VFF+RFHSTATL N+FTGLIKAPFMACAIGIVAMKEGF VG +S+SL
Sbjct: 121 SIIVWKYYDIPFSVFFARFHSTATLGNVFTGLIKAPFMACAIGIVAMKEGFGVGTNSDSL 180

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           GK+VTTCVVQSIS+VIIIDSLFAIFYFAIGI
Sbjct: 181 GKRVTTCVVQSISMVIIIDSLFAIFYFAIGI 211


>gi|285016849|ref|YP_003374560.1| ABC transporter permease [Xanthomonas albilineans GPE PC73]
 gi|283472067|emb|CBA14574.1| putative abc transporter permease abc transporter, permease protein
           [Xanthomonas albilineans]
          Length = 249

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +    LG            S   +  L  LIR++Y VG   +P++ +     G V+  
Sbjct: 3   MAASIRALGRAGLFFLTVLRGSLPSRDLLAELIREIYKVGARSLPIIAVGGAFVGLVLTL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+ +GA      L+ +   RE+  +LTA++  GR+GS+I AE+G M+  ++I A+
Sbjct: 63  QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D V   ++PR WA ++++PLLT +    AI  +         +    F+S   S+
Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAIGALGLDRGTFWSALSSS 182

Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                +    ++K+        +VA   GF             T  VV +  +V++ + +
Sbjct: 183 VDFWADFGVAMLKSAVFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242

Query: 364 FAIFYF 369
            +   F
Sbjct: 243 MSALLF 248


>gi|302560790|ref|ZP_07313132.1| YrbE family protein [Streptomyces griseoflavus Tu4000]
 gi|302478408|gb|EFL41501.1| YrbE family protein [Streptomyces griseoflavus Tu4000]
          Length = 254

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 107/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        I Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVSRAVFRRPFQFREFIEQFWFIAGVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +    +G         D     + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVMQDGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L++++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLSDLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGIYLQI 248


>gi|319945411|ref|ZP_08019671.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319741197|gb|EFV93624.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 260

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
              +   +G+     IND       L  ++  +                +  Q+Y+VG  
Sbjct: 1   MIGMLARLGRWARHVINDLGFAGRFLMQLLWASLLSLKRP-------RLISEQVYFVGNR 53

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + ++++     G V+  QG + L ++GAE     L+++  LRE+G +++A++ AGR+ +
Sbjct: 54  SLSIILISGLFVGFVLGLQGYYNLERYGAESSLGLLVALSLLRELGPVVSALLFAGRACT 113

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           +I A IG MK  E++ A+  MG+D ++ +++PR  A++I+LPLL +L +   I+GA +V 
Sbjct: 114 SITAGIGLMKSGEQLIAMEMMGVDPMKRVLAPRFMAVMIALPLLALLFSAVGIVGAWVVG 173

Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
            +   +    F+S+     +   ++  G+IK+   A   G +A+  G         + + 
Sbjct: 174 VQMIGVDPGSFWSQMQGGVSFRADVLNGVIKSFVFALLCGFIALVVGHESDATPEGVARA 233

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370
            TT VV S   V+  D L     F 
Sbjct: 234 TTTTVVISSLAVLASDVLMTALMFG 258


>gi|53715368|ref|YP_101360.1| hypothetical protein BF4084 [Bacteroides fragilis YCH46]
 gi|253567257|ref|ZP_04844707.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265767855|ref|ZP_06095387.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52218233|dbj|BAD50826.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|251944088|gb|EES84607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263252527|gb|EEZ24055.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 247

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I   G   +   + + F    I+++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|262377332|ref|ZP_06070556.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145]
 gi|262307785|gb|EEY88924.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145]
          Length = 259

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 3/256 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            I         +   +G+      +   S   + G     I QMY VGV  + ++++   
Sbjct: 3   AIAALGRRVIERVQGIGVATLMLLQILFSMPTWLGV-KLFIYQMYRVGVLSLLIIVVSGL 61

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             GAV+  Q    LS FG+E      +++  LRE+  ++ A++ AGR+GSA+ AEIG MK
Sbjct: 62  FIGAVLGLQMFSILSTFGSESMLGTAVALTLLRELAPVVAALLFAGRAGSALTAEIGLMK 121

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
             E++ ++  +G+D ++ +ISPR+WA I SLP+L+++     I+G  +V   +       
Sbjct: 122 ATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVDFLGADEGA 181

Query: 297 FFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           ++S   S+     ++  G +IK+   A     +A+ +G+A    S  +    T  VV S 
Sbjct: 182 YWSGMESSVQFYKDVLNGTIIKSFVFALICTWIAVYQGYACVPTSEGIATSTTRTVVYSS 241

Query: 355 SIVIIIDSLFAIFYFA 370
             V+  D +     F 
Sbjct: 242 LCVLGFDFVLTAVMFG 257


>gi|117164593|emb|CAJ88139.1| putative ABC-transporter integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 254

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVARAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG +GSAI A++GS  I EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAAGSAICADLGSRTIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +   I+G  +      D     + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGILGGYVFNVFLQDGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       G+VA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYVSELKALVFGFIAGVVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  +
Sbjct: 242 TGVYLQL 248


>gi|291449028|ref|ZP_06588418.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351975|gb|EFE78879.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 253

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 108/247 (43%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +     G + +       + ++    +   I Q ++V    +    L+S   GAVIA 
Sbjct: 1   MLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 60

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++I+G +GSAI A++GS KI EE+DA+
Sbjct: 61  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSRKIREELDAM 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F + 
Sbjct: 121 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 181 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 240

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 241 TAIYLQI 247


>gi|317508868|ref|ZP_07966507.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252829|gb|EFV12260.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 304

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 111/276 (40%), Gaps = 3/276 (1%)

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLL 154
                   + +   L   + K +V     +  Q   LGLV+    +      +     L 
Sbjct: 18  PTRYVPPGFRTAVQLQSALRKAVVSGFVSAGHQITFLGLVLGAVPKTIRHYRRQIGAQLQ 77

Query: 155 SLI--RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
            +I       VG   + +++ +    GA I   G   L   G       + + +  RE+ 
Sbjct: 78  DVIWGNGSIIVGGGSIGMLLFMGVCIGASIGVVGFATLDLVGLGPLVGFVSAYVNTRELA 137

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
            ++TA+  A ++G  I AE+G+M+I+EEIDAI   G+  +  +I+ R+ A +IS+  L +
Sbjct: 138 PMVTAIGFAAQTGCRITAEVGAMRISEEIDAIEAQGIQSIPFVITTRVIAGVISIIPLYV 197

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +      +  + V+   +      ++  F S     ++   ++KA     AI  +   +G
Sbjct: 198 MTTLLGYVSCAFVVNVVHGEASGTYYHYFDSFIHPIDVVYSVVKAIVFVVAIIAIHGYQG 257

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +        +G      +  S+  V++ D +  I  
Sbjct: 258 YYASGGPEGVGVAAGRAIRTSLITVVVADMVLTIVL 293


>gi|153809065|ref|ZP_01961733.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185]
 gi|149128398|gb|EDM19617.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185]
          Length = 247

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKIAAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDSVVSSSVLILFADLI 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|260061863|ref|YP_003194943.1| hypothetical protein RB2501_09685 [Robiginitalea biformata
           HTCC2501]
 gi|88785996|gb|EAR17165.1| hypothetical protein RB2501_09685 [Robiginitalea biformata
           HTCC2501]
          Length = 245

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       E      K+      +++++  +    + ++I ISF  G V+A Q
Sbjct: 1   MNYLASIGSYAIMIVETFKKPTKWPIMRSLILKEIDELIYGSMGIIIFISFFIGGVVAIQ 60

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  +S     +           + E     T++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNISNPLIPKNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I A+++  P +  +A +  I+G  I          A F       
Sbjct: 121 EVMGVNALNYLVFPKIIAMLL-YPFVVAIAMYVGILGGWIAGVFGGFSSSADFIEGLQLD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK+   A  I  V    GF +   +  +GK  T   V +  ++I+++ + 
Sbjct: 180 FIPFHVMYSFIKSVVFAFIIATVPSYHGFYMKGGALEVGKASTVSFVWTSVVIIVMNYIL 239

Query: 365 AIFYFA 370
                 
Sbjct: 240 TQLLLG 245


>gi|255011705|ref|ZP_05283831.1| hypothetical protein Bfra3_21365 [Bacteroides fragilis 3_1_12]
 gi|313149539|ref|ZP_07811732.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138306|gb|EFR55666.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 247

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  +   G   +   + + F    I+++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYMMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 ++ G+IK+ F A  I  V+   G+ V   S  +GK  T  VV S  +++  D +
Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|169794572|ref|YP_001712365.1| toluene tolerance efflux ABC transporter membrane protein
           [Acinetobacter baumannii AYE]
 gi|213158857|ref|YP_002320855.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057]
 gi|215482161|ref|YP_002324343.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii
           AB307-0294]
 gi|260557005|ref|ZP_05829222.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC
           19606]
 gi|294839769|ref|ZP_06784452.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013113]
 gi|294860447|ref|ZP_06798216.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013150]
 gi|301347321|ref|ZP_07228062.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB056]
 gi|301510049|ref|ZP_07235286.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB058]
 gi|301597237|ref|ZP_07242245.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB059]
 gi|169147499|emb|CAM85360.1| toluene tolerance efflux transporter (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213058017|gb|ACJ42919.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057]
 gi|213988817|gb|ACJ59116.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii
           AB307-0294]
 gi|260409611|gb|EEX02912.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC
           19606]
          Length = 259

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I    + AH+L  +I +        +  KG     + QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGAAAHMLLQIIFS--------FPTKGGFGRFVYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     GAV+  Q    L  FGAE      +S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIIAVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     IIG  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +       F+S   +T     +IF G +IK+   A     VA+ +G+A       +   +
Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIFNGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S   V+  D +     F 
Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257


>gi|54027607|ref|YP_121849.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54019115|dbj|BAD60485.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 284

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 105/249 (42%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               +    + + IS   E   + ++ +      +RQ  ++        +L++   G ++
Sbjct: 30  RSLETFGRQITMGISAVAELFIAIFRRRFPFDEFVRQCAFMANVAAAPTLLVAIPIGVIV 89

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q      Q GA  F      +  +++   L+T++MIAG  GSAI A++GS  I EEID
Sbjct: 90  SIQVGAVAGQVGATSFIGAANGLGIVQQGAPLVTSIMIAGAVGSAICADLGSRTIREEID 149

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ MG+D +R L++PR+ A ++   LL     F   +   I            +   F 
Sbjct: 150 AMKVMGVDPMRRLVAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNIFAQGGTPGSYIGTFS 209

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S A   ++   L+K+        I+A   G         +   V + VV S  ++  ++ 
Sbjct: 210 SFAVTRDLLVALVKSLIFGLLAAIIACDTGLNTRGGPGGVANSVNSAVVSSAIMLFGVNL 269

Query: 363 LFAIFYFAI 371
                Y A+
Sbjct: 270 GITQIYSAL 278


>gi|225011579|ref|ZP_03702017.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-2A]
 gi|225004082|gb|EEG42054.1| protein of unknown function DUF140 [Flavobacteria bacterium
           MS024-2A]
          Length = 245

 Score =  158 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 2/243 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G              K+K     +++ +  + +  + +V  ISF  G V+A Q A
Sbjct: 3   ILTHIGNYFIMLKLTFGKFTKWKILKQLILKDIDTLIIGSLGIVSFISFFVGGVVAIQTA 62

Query: 188 FQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             L                  + E      ++++AG+ GS I + IG+M++ E+IDA+  
Sbjct: 63  LNLENPLLPKNLIGFAARQSIILEFAPTFISIIMAGKVGSYITSSIGTMRVTEQIDALEV 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I +L +  PL+  ++ F  I G  I          A +         
Sbjct: 123 MGINTHNYLIFPKIVSLSL-YPLVICISMFLGIFGGYIAAVYGGFSSSADYIEGIQMDFI 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +I    IK  F +  +  +    G+ +   +  +GK  T   V +  ++I+++ L   
Sbjct: 182 PFHITYAFIKTSFFSFILATIPAYHGYYMNGGALEVGKASTVSFVWTSVVIILLNYLITQ 241

Query: 367 FYF 369
              
Sbjct: 242 LLL 244


>gi|325286981|ref|YP_004262771.1| hypothetical protein Celly_2079 [Cellulophaga lytica DSM 7489]
 gi|324322435|gb|ADY29900.1| protein of unknown function DUF140 [Cellulophaga lytica DSM 7489]
          Length = 260

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       E      K+      +++++  +    + ++I ISF  G V+  Q
Sbjct: 16  MNYIASIGSYFIMIKEVFKKPTKWSIMKKLILKEIDELVFGSLGIIIFISFFIGGVVTIQ 75

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L+     E           + E     T++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 76  TALNLTNPLIPESLIGFAARQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I AL++  P    +A +  I G  I          A F       
Sbjct: 136 EVMGVNSLNYLVFPKIIALLL-YPFAIAIAMYVGIFGGWIAGVFGGFTTSASFIEGIQLD 194

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK+   A  I  +    G+ +   +  +GK  TT  V +   +II++ + 
Sbjct: 195 FIPYHVTYAFIKSIIFAFVIATIPSFHGYYMKGGALEVGKASTTAFVWTSVAIIILNYIL 254

Query: 365 AIFYFA 370
                 
Sbjct: 255 TQLLLG 260


>gi|255693535|ref|ZP_05417210.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565]
 gi|260620673|gb|EEX43544.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565]
          Length = 247

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G      G   +   + + F    + ++  +GV+ + +V+LISF  GAVI  
Sbjct: 1   MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60

Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
           Q    +       +    +   + L E    +  +++AG+ GS I +E+G+M++ ++IDA
Sbjct: 61  QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG++    LI P+I A++  +P+L   + F+ IIGA    W    +           
Sbjct: 121 LEIMGVNSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
                 I+ G+IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +
Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDSVVSSSVLILFADLV 240

Query: 364 FAIFYFA 370
                  
Sbjct: 241 LTKLLMG 247


>gi|257054442|ref|YP_003132274.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584314|gb|ACU95447.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 250

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 110/244 (45%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G + +   +     ++        I+Q +++    +    L++   GAVI+ Q  
Sbjct: 1   MLRETGKLFALALDVARGVFRRPFQFREFIQQAWFIASVTILPTALVAIPFGAVISMQFG 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
               Q GA+ ++     +  +++   L+ A+++AG  GSAI A+IG+  I EEIDA+  +
Sbjct: 61  SLAKQLGAQSYTGAGSVLATVQQASPLVVALLVAGAGGSAICADIGARTIREEIDAMEVL 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  V+ L+ PR+ A +    LL  + +   ++G         D     + + F + A L
Sbjct: 121 GVSAVQRLVVPRVLACMFVALLLNGMVSVIGVLGGYFFNVVLQDGTPGAYLASFSALAQL 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++++ G IKA        +VA   G         +G  V   VV +  ++ +++++  + 
Sbjct: 181 SDLWIGEIKALIFGFIAAVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFVVNTVLTLI 240

Query: 368 YFAI 371
           Y  +
Sbjct: 241 YLQL 244


>gi|254423231|ref|ZP_05036949.1| conserved domain protein [Synechococcus sp. PCC 7335]
 gi|196190720|gb|EDX85684.1| conserved domain protein [Synechococcus sp. PCC 7335]
          Length = 291

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 1/240 (0%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193
           + +   G+      + +     ++  +   G   V  VI  +   G +   Q A ++S+F
Sbjct: 51  MALLLAGQVIHRLLRGRFGQRQIMDHLMSAGPRCVASVIATNVCAGLIFGIQTAREMSRF 110

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           GA        +     E+  +LTA ++A + GSA  AEI +MK+ ++IDA++ +  D + 
Sbjct: 111 GAVSSLGSAFAAGYCSELAPILTAGVLACQVGSAFAAEIAAMKLTQQIDALKMLRTDPID 170

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ A  + LP+LT+LA    ++    +   YY +P   F        +++++   
Sbjct: 171 YLVMPRVIACAVMLPMLTVLALVCGVMSGGFLTTYYYHLPMGTFLDGVRGALSVSDVLLI 230

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + KA      I I +   G    +H   +G+  T+ V+ +   +  ID + A F   + I
Sbjct: 231 MGKAILFGLVIAIASCSRGLTSALHGKGVGQSATSAVMMAWIALFFIDLVIA-FLALLAI 289


>gi|328880858|emb|CCA54097.1| putative ABC-transporter integral membrane protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 254

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 105/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q ++V    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVSRAVFRRPFQFREFLEQFWFVASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  + +    +G               + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMAVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGIYLQI 248


>gi|296139955|ref|YP_003647198.1| hypothetical protein Tpau_2250 [Tsukamurella paurometabola DSM
           20162]
 gi|296028089|gb|ADG78859.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 267

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 113/256 (44%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + K      S     G++     +   ++++        I Q +++    +    L++
Sbjct: 6   RSVAKAAQGGTSALTQAGMIFQLFADIVRNTFRRPFQYREFIEQSWFIASVTILPTALVA 65

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA+++ Q    + Q GAE F+     +  +++   ++TA+++AG +GSA+ A++G+ 
Sbjct: 66  VPFGAIVSLQTGSLIGQLGAESFTGAASVLAVVQQGAPVVTALLVAGAAGSAVCADLGAR 125

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            + EEI A+  +G++ V+ L+ PR+  +++    L  L +   ++G              
Sbjct: 126 TVREEIAAMEVLGINPVQRLVVPRVLGMMLVSMFLNGLVSVVGVVGGYFFNVVLQHGTPG 185

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L ++  G  KA       G+VA  +G   G     +G  V   VV +  
Sbjct: 186 AYLASFSALAQLPDLLVGEFKALVFGLIAGVVAAYKGLHPGGGPKGVGDAVNQSVVITFL 245

Query: 356 IVIIIDSLFAIFYFAI 371
           ++   + +    Y  +
Sbjct: 246 LLFFANIILTAVYLQV 261


>gi|256820380|ref|YP_003141659.1| hypothetical protein Coch_1553 [Capnocytophaga ochracea DSM 7271]
 gi|315223460|ref|ZP_07865317.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga ochracea F0287]
 gi|256581963|gb|ACU93098.1| protein of unknown function DUF140 [Capnocytophaga ochracea DSM
           7271]
 gi|314946633|gb|EFS98624.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga ochracea F0287]
          Length = 245

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 2/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G       +      ++      ++R++  +    + +V  ISF  G V+A Q A 
Sbjct: 4   IAAVGGYFIMLYDVFRKRTRWSIMKDLILREIDDLIFGSIGIVTFISFFVGGVVAVQTAL 63

Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +   F  +           + E     TA+++AG+ GS I + IG+M++ E+IDA+  M
Sbjct: 64  NIDNPFIPKYLIGFATRQSIVLEFAPTFTAIILAGKIGSFITSSIGTMRVTEQIDALDIM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ V  L+ P+I AL++  P L  L  +  ++G             A F          
Sbjct: 124 GVNSVNYLVFPKIVALMLM-PFLIALGMYLGVLGGWASAVMSGYTTSAEFVQGVQYDFKP 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            ++     K    A  +  +    G+ +   +  +GK  T   V +  ++I+ +S+    
Sbjct: 183 YSMIYAFTKTVVFAFFLATIPSYHGYYMKGGALDVGKASTVSFVWTSIVIILSNSVLTQL 242

Query: 368 YFA 370
           ++A
Sbjct: 243 FYA 245


>gi|226349637|ref|YP_002776751.1| putative YrbE family protein [Rhodococcus opacus B4]
 gi|226245552|dbj|BAH55899.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 266

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 104/253 (41%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G++  K           +G   + + E     +K    L   ++Q +++    +   +L+
Sbjct: 11  GERSAKARAALRVAPRAVGAFYATSLETYRCMFKRPFHLREFLQQAWFIASVSIMPALLM 70

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +     +   Q    L++ GA   +     +  +REIG ++T +++AG   +AI A++GS
Sbjct: 71  AIPFCMMFVYQINILLAEIGAVDLAGAGAGVAIVREIGPIVTVLVVAGAGSTAICADLGS 130

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
             I EEIDA++ +G+D +  L  PR+ A       L  L +   ++G  I          
Sbjct: 131 RTIREEIDAMKVLGIDPIHRLCVPRVLASTFIAIFLNGLVSAVGLVGGYIATVYMQGASP 190

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             + +       L + F   IKA       G+VA   G  V      +G  V   VV S 
Sbjct: 191 GQYVTAISIITGLGDFFVAEIKAAVFGMLAGLVACHLGLNVRGGPKGVGDAVNQTVVFSF 250

Query: 355 SIVIIIDSLFAIF 367
            ++ + +S+    
Sbjct: 251 LLLFLANSIITTL 263


>gi|83594240|ref|YP_427992.1| hypothetical protein Rru_A2908 [Rhodospirillum rubrum ATCC 11170]
 gi|83577154|gb|ABC23705.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC
           11170]
          Length = 275

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/275 (27%), Positives = 140/275 (50%), Gaps = 2/275 (0%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
           +    +     +       +G+ ++  + +    + +    +                L 
Sbjct: 2   DSPKTKPGLSQALLKAVERLGQGVIAGVAEIGQASLLGAESLYWL--VVGRFRGQPVRLG 59

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
           +++ Q   +G+  +P+V++++F  G ++A QG + L  FGAE   +  ++   +RE   L
Sbjct: 60  AIVEQAMEMGIRALPIVLVMNFTIGMMLAIQGIYSLRMFGAEQQVVLGVAFSVVREFAPL 119

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T +++AGRSGSAI A +G+M IN+EIDA+  MG+  VR L++P + A ++ +PL+T L 
Sbjct: 120 ITGILVAGRSGSAIAARLGTMTINQEIDALTVMGIVPVRYLVAPPLIAALVMVPLMTFLG 179

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              A++GAS+ +     +  + FF +      L ++  GL K+   A  I +V +  G +
Sbjct: 180 MLVALLGASLTVRIDLGMSLSAFFHQTLDILRLIDLTHGLGKSALFALQIVLVGVVNGVS 239

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
           V   +  +GK  T  VVQ+IS +I+ D +FA    
Sbjct: 240 VSGGAEGVGKMTTRSVVQAISAIIVTDMVFAFILT 274


>gi|227536152|ref|ZP_03966201.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300772122|ref|ZP_07081992.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|227244049|gb|EEI94064.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300760425|gb|EFK57251.1| ABC superfamily ATP binding cassette transporter permease protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 244

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             + +G  I           K K +    +  M  +G+  + ++++IS   GAV+  Q A
Sbjct: 2   LIYHIGKYILLLKSVFKKPEKGKIYWKETMFAMTDIGLGSLGLIVIISTFIGAVMTMQIA 61

Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           FQL S          +     + E+G  ++A+++ G+ GS+I ++IGSM++ E+IDA+  
Sbjct: 62  FQLVSDLIPNSIIGQINRDSNILELGPTISALVLMGKVGSSISSQIGSMRVTEQIDALEI 121

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++    LI P+I A I  +P L I+A F AI+G  +       +  A +      +  
Sbjct: 122 MGINAPGYLILPKILAGITMIPALVIVAIFCAILGGLLGGALSGAVSTADYIQGIQGSFN 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
              +   ++KA      I  V   +GF V   +  +G+  T  VV     ++  D L   
Sbjct: 182 GFTVSVAMVKAVVFGFIITSVPAYKGFYVSGGALEVGEAGTQAVVIGCITILASDYLITA 241

Query: 367 F 367
            
Sbjct: 242 L 242


>gi|302525561|ref|ZP_07277903.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302434456|gb|EFL06272.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 286

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 95/252 (37%), Gaps = 7/252 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILI 174
             +     Q    G  ++ +          +     L    +  G        + V+I +
Sbjct: 24  ASLEGLGKQLSFYGRALAWSPRTIRRYG--RETTRLLTEVCFGTGGLAVIGGTLGVMIGM 81

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +  TG ++  QG   L+Q G    +  + +    RE+  L   + ++   G    A++G+
Sbjct: 82  TLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGCGFTAQLGA 141

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+I+EEIDA+  M +  +  L++ R+ A + ++  L  +   S+ + +  +    Y    
Sbjct: 142 MRISEEIDALEVMAVPSMPYLVTTRVLAGVTAVIPLYAVGLLSSYLASRQITIWLYGQSA 201

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             +   F       ++     K    +  + +     G+        +G  V   V  SI
Sbjct: 202 GTYDHYFTLFLPPEDVLWSFAKVIVFSVLVILSHCYYGYTASGGPAGVGIAVGRAVRTSI 261

Query: 355 SIVIIIDSLFAI 366
            ++ ++D   ++
Sbjct: 262 VLISVLDFFLSL 273


>gi|299768645|ref|YP_003730671.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1]
 gi|298698733|gb|ADI89298.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1]
          Length = 259

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 10/264 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           N    +G+ +++ I    + AH+L  +I +           KG       QM+ VGV  +
Sbjct: 2   NTIAWLGRLVIERIRGIGAAAHMLLQIIFSLPS--------KGGFGRFGYQMHRVGVMSL 53

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            ++ +     GAV+  Q    L  FGAE      +S+  LRE+  ++ A++ AGR+GSA+
Sbjct: 54  LIITVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSMK +E++ ++  +G+D ++ ++SPR+WA I+SLP+LT++     IIG  +V   
Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173

Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
           +       F+S   +T     +I  G +IK+   A     VA+ +G+A       +   +
Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIINGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233

Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370
           T  VV S   V+  D +     F 
Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257


>gi|120437216|ref|YP_862902.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
 gi|117579366|emb|CAL67835.1| ABC-type transporter permease protein [Gramella forsetii KT0803]
          Length = 245

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +  H +G              K       + +++  + +  + +V  +SF  GAV+A Q
Sbjct: 1   MTYLHSIGEYFIMLKGVFGRMTKGSVLRNLIFKEINELIMGSLGIVAFLSFFIGAVVAIQ 60

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  L+     +           + E      ++++AG+ GS I + IGSM++ E+IDA+
Sbjct: 61  TALNLNNPLIPKSLVAFAARQSVILEFAPTFISIIMAGKVGSFITSSIGSMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++    LI P+I A +++ P L  +A F  I GA         +    F +     
Sbjct: 121 EVMGINSKNYLILPKIIA-MLTYPFLIAIAMFLGIAGAYFAAVFGGFVTSDQFLTGLQDD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK    A  +  V    G+ +   +  +G+  TT  V +  ++II +   
Sbjct: 180 FNGFHLTYAFIKTFLFAFILATVPSYHGYYMKGGALEVGEASTTSFVWTSVVLIITNYAI 239

Query: 365 AIFYFA 370
                +
Sbjct: 240 TQLLLS 245


>gi|294632699|ref|ZP_06711258.1| YrbE family protein [Streptomyces sp. e14]
 gi|292830480|gb|EFF88830.1| YrbE family protein [Streptomyces sp. e14]
          Length = 254

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 104/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVGRAIFRRPFQAREFVEQFWFLASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++I+G  GSAI A++GS  I EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLISGAGGSAICADLGSRTIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  L +   I+G               + S F S 
Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVYLQHGTPGAYVSSFSSL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++    KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYVSEFKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVI 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGVYLQI 248


>gi|239982859|ref|ZP_04705383.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291454702|ref|ZP_06594092.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291357651|gb|EFE84553.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
          Length = 254

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 105/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   E   + ++        + Q +++    +    L+S   GAVIA 
Sbjct: 2   ITGALRQTGRLFALAAEVTRAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ F+     +  +++   L+ A++IAG  GSAI A++GS KI EE+DA+
Sbjct: 62  QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  V+ L+ PR+ A +    LL  + +    +G               + S F + 
Sbjct: 122 EVMGVSPVQRLVVPRVLATMSVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++   +KA       GIVA   G         +G  V   VV +  ++  ++ + 
Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVM 241

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 242 TGLYLQI 248


>gi|149370868|ref|ZP_01890463.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49]
 gi|149355654|gb|EDM44212.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49]
          Length = 245

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 2/240 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G       +      K       + +++  + +  + +V  ISF  G VI  Q A  L+
Sbjct: 7   IGSYFLMLKKVFGGFTKGSVLRELIFKEIDDLVIGSLGIVAFISFFVGGVITIQTALNLT 66

Query: 192 Q-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
                +           + E      ++++AG+ GS I + IGSM++ E+IDA+  MG++
Sbjct: 67  NPLIPKSLIAYATRQSIILEFAPTFMSIIMAGKVGSFITSSIGSMRVTEQIDALEVMGIN 126

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +  L+ P+I A++   PL+  LA F  I+G  I            F      T    ++
Sbjct: 127 SLNYLVFPKIVAMMF-YPLVIALAMFLGIVGGYIAGVYGGFTNSTDFGIGLRDTFEPFHL 185

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               +K    A  I  V   +GF +   +  +GK  T   V +  ++I+ + +      +
Sbjct: 186 VYAFVKTFIFAFIIATVPSWQGFYMKGGALEVGKASTNSFVWTSVLIILANYIVTQLLLS 245


>gi|296179480|gb|ADG96485.1| SupA [Gordonia cholesterolivorans]
          Length = 257

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 101/247 (40%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I  + +    +G       E   +  +       L+ Q +++    +   +L+S     
Sbjct: 8   AIGKARNGVQTVGSFFLTFWEILKALPRRPFQWRELVAQAWFIASVSIVPTMLMSIPFCV 67

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++  Q    L++ GA   S     I  +REIG ++T +++AG   +AI A++GS  I EE
Sbjct: 68  MVVFQINVLLNEIGAIDLSGAGAGIAVIREIGPIVTVLVVAGAGATAICADLGSRTIREE 127

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D ++ L  PR+ A  +    L  L     + G  +            + + 
Sbjct: 128 IDAMRVLGIDPIQRLAVPRVIASCVVAVFLNGLVTAIGLTGGYLYGVFLQGATPGQYITA 187

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                  +++    +KA        +VA   GF  G     +G  V   VV S  ++ + 
Sbjct: 188 IPILTGTSDLLISELKAGIFGLLAAVVACHLGFKAGGGPKGVGDAVNQTVVLSFVLLFLA 247

Query: 361 DSLFAIF 367
           +++    
Sbjct: 248 NAVITTL 254


>gi|88608548|ref|YP_506573.1| putative ABC transporter, permease protein [Neorickettsia sennetsu
           str. Miyayama]
 gi|88600717|gb|ABD46185.1| putative ABC transporter, permease protein [Neorickettsia sennetsu
           str. Miyayama]
          Length = 250

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 115/246 (46%), Gaps = 2/246 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             N   +   I G     +     S    K +   +I+Q++ +G   +P+V   +   GA
Sbjct: 1   MYNHIKNTIKIFGDFTLFSLSTFLSGR--KIYFSEIIKQLFLIGYYSMPIVAFSAVFIGA 58

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L  F ++     +++    REIG ++  +++AGR  S I AEIG+M++ E+
Sbjct: 59  MLAFHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +D +R++ ++    L+ P+I A +IS P+L I++    ++G  ++    +     ++ S 
Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIVSTLFGMLGGYLIGTYKFAFSKMLYVSD 178

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  T  ++  G+ K+ F       V+          +  +G  VT  VV S  ++++ 
Sbjct: 179 TLTFLTSKDLIAGMTKSFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238

Query: 361 DSLFAI 366
           + L  +
Sbjct: 239 NYLITL 244


>gi|269124784|ref|YP_003298154.1| hypothetical protein Tcur_0519 [Thermomonospora curvata DSM 43183]
 gi|268309742|gb|ACY96116.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 288

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 101/205 (49%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V+  +SF  G  I  QG   L   GAE F   + S   +REI  ++ AV +A + GSA
Sbjct: 77  VFVIFTMSFFVGTEIGLQGYTGLRSIGAESFMGLVGSFANVREITPVIAAVALAAQCGSA 136

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             AE+G+M+I+EEIDA+  MG+     L+  R+ A +I+L  L ++A F++     ++  
Sbjct: 137 FTAELGAMRISEEIDALEVMGISSFTYLVCTRVLAALIALVPLYLIALFASFFSTRLITT 196

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           +++ +   V+   F     + ++    IK    A A+  +    G+        +G+   
Sbjct: 197 QFFGLAPGVYDYYFQLYLPMIDLVYSSIKVAVFAFAVIAIHCYYGYYATGGPAGVGRATG 256

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372
             +  SI +++ ++ L +  ++  G
Sbjct: 257 RAIRLSIIVIVTLNLLLSYLFWGNG 281


>gi|190343261|gb|ACE75649.1| ABC transporter permease protein [Candidatus Nitrospira defluvii]
          Length = 259

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 122/257 (47%), Gaps = 2/257 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G+K +       + A +    + +      +       L  L+RQ+ + GV  +P
Sbjct: 1   MIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGRGETLRVLVRQILFTGVDALP 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V  +I+ + G +I  Q   QL + GA      ++ +  +RE+G L+TA ++ GRSG+AI 
Sbjct: 59  VTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLITAFIVVGRSGTAIA 118

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G+M +  E+ A+R MG+   R +I PR+  +++S+  LT+  +  A++G  ++    
Sbjct: 119 TELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFDVVAVLGGYLIADAQ 178

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
             IPF  F        +  ++    IK      A+  +    G AV      + ++ T  
Sbjct: 179 LTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAVRSSFTEVPQQTTRA 238

Query: 350 VVQSISIVIIIDSLFAI 366
           ++ S  + ++ID +  +
Sbjct: 239 MINSFVLCLLIDVVVTV 255


>gi|78223740|ref|YP_385487.1| hypothetical protein Gmet_2543 [Geobacter metallireducens GS-15]
 gi|78194995|gb|ABB32762.1| protein of unknown function DUF140 [Geobacter metallireducens
           GS-15]
          Length = 253

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 116/246 (47%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L      +       ++   +    I Q+  +GV  + +V L    TG V+
Sbjct: 5   RTVKWFLQELQAFFVLSARAVVRIFRRPWYYREFITQLDKMGVGSLFIVCLTGLFTGMVM 64

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   ++++  ++E+G +L+++M+AGR GS+I AE+G+M + E++D
Sbjct: 65  ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVD 124

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D +  L++ R+ A+++++PLL ++ +  A++G  ++    YDI   +++    
Sbjct: 125 AMRVEGTDIITRLVTSRLKAMLVAMPLLAVVTDALALLGGYVIASG-YDINLLMYWKSLS 183

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  G+ K       I ++    G      +  +G      VV S  +V++ D 
Sbjct: 184 QFMVFQDLVEGVAKPFVFGFLIAMIGSYAGLTTSGGAEGVGAAAKRAVVVSSIMVLVCDF 243

Query: 363 LFAIFY 368
                +
Sbjct: 244 FMTKIF 249


>gi|300784334|ref|YP_003764625.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793848|gb|ADJ44223.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 283

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 105/260 (40%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG-------- 167
           + +++I         LG  ++   +  A S +  + +    +R +  V            
Sbjct: 11  RTLEYIARPGQSLEGLGKQLAFAAKALAWSPRTIRRYSRETLRLLTEVCFGTGGLAVIGG 70

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+I ++  TG ++  QG   L+Q G    +  + +    RE+  L   + ++   G 
Sbjct: 71  TLGVMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGC 130

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+I+EEIDA+  MG+  +  L++ R+ A + ++  L  +   S+ + +  + 
Sbjct: 131 GFTAQLGAMRISEEIDALEVMGVPSMPYLVTTRVLAGVAAVIPLYAVGLLSSYLASRQIT 190

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              Y      +   F       ++     K    +  + +     GF        +G  V
Sbjct: 191 IWLYGQSAGTYDHYFTLFLPPGDVLWSFGKVIVFSVLVILSHCYYGFNASGGPAGVGVAV 250

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  SI ++ ++D   ++
Sbjct: 251 GRAVRTSIVLISVLDFFLSL 270


>gi|262201121|ref|YP_003272329.1| hypothetical protein Gbro_1128 [Gordonia bronchialis DSM 43247]
 gi|262084468|gb|ACY20436.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 268

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 114/256 (44%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + +            G ++    +    ++         I+Q +++    +    LI+
Sbjct: 7   RGVDRIAKAGTGALEQTGNIVQLFVDVARQTFVRPFQWREFIQQAWFIASVTILPTALIA 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA+++ Q    + Q GAE ++     ++ +++   L+T+++IAG +GSA+ A++GS 
Sbjct: 67  IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVIQQGSPLVTSLLIAGAAGSAVAADLGSR 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            I EEIDA+  +G++ ++ L+ PR+ A+++   LL  L     I G              
Sbjct: 127 TIREEIDAMEVLGINPIQRLVVPRVLAMVLVAMLLNGLVAVIGIGGGYFFNVVVQGGTPG 186

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L +++   +KA       G+VA  +G         +G  V   VV +  
Sbjct: 187 AYLASFGALAQLPDLYVSTLKAAIFGVLAGVVAAYKGLHPKGGPKGVGDAVNQSVVITFL 246

Query: 356 IVIIIDSLFAIFYFAI 371
           ++ + + +    Y  I
Sbjct: 247 LLFLANLIITAVYLQI 262


>gi|324997539|ref|ZP_08118651.1| hypothetical protein PseP1_02183 [Pseudonocardia sp. P1]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 99/253 (39%), Gaps = 1/253 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +     G +   +          + +   ++ Q   + ++   ++ ++  V G
Sbjct: 26  SLGTQLRNGVSTAGEIFRFSTATIRGFRDVRHYSSEVLHQAGILILTSGLIIWVMQGVMG 85

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   + ++ L Q GA ++S    +   +RE+   +   + A + G  +VAE+GSM+I++
Sbjct: 86  TVCGLEASYTLKQIGAPLYSGIFNAYCSIREMAPYMWGYIFAAKVGCGLVAELGSMRISD 145

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFF 298
           EIDA+  MG+     L+  R+ A  +++P L  +      +   +V       +    + 
Sbjct: 146 EIDAMEVMGIKARSYLVGTRVIAAWLAIPFLYTVGLGIMYVTMYLVTVVQLGGVSPGGYL 205

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       +    LIK       I  V    GF        +G+     ++ ++ ++ 
Sbjct: 206 YIFWLYQNPLDFLYSLIKVMSFGTTIVFVGCYFGFNATGGPVGVGRNTAKAMMINMVLIH 265

Query: 359 IIDSLFAIFYFAI 371
           I+  L    ++ +
Sbjct: 266 ILGVLGTQLFWGL 278


>gi|300313364|ref|YP_003777456.1| organic solvents resistance ABC transporter permease
           [Herbaspirillum seropedicae SmR1]
 gi|300076149|gb|ADJ65548.1| ABC-type transport system involved in resistance to organic
           solvents, permease component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 259

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 115/238 (48%), Gaps = 1/238 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +             +G           SS         +  Q++++G   + ++ +    
Sbjct: 6   VSGLGRSLREFVVGVGFAGRMFASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIAVSGLF 65

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+  QG + L+++G+E     L+++   RE+G ++TA++ AGR+G+++ AEIG MK 
Sbjct: 66  VGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEIGLMKA 125

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M ++ ++ +++PR WA +I++P+L  + +   +IG  +V      +    F
Sbjct: 126 GEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGVDEGAF 185

Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           +S+      +  +I  G++K+     A+  VA+ +G+        + +  T  VV + 
Sbjct: 186 WSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGVARATTRTVVIAS 243


>gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 [Kribbella flavida DSM 17836]
 gi|283813316|gb|ADB35155.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836]
          Length = 275

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 7/256 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PV 170
           KK +  ++    Q       ++ +G         K  L  L       G   V      V
Sbjct: 9   KKPLNSLDRLGEQLAFYLKALAWSGRSVTRYR--KEILRLLAEVTLGTGALAVIGGTVGV 66

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +  ++F TG  +  QG   L+Q G   F+  + + +  REIG L+  + +A   G    A
Sbjct: 67  ITFLAFFTGTEVGLQGYSALNQIGTSAFAGFVSAYINTREIGPLIAGIALAATVGCGFTA 126

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EEIDA+  M +  +  L++ RI A +I++  L ++   S+     + +  +Y
Sbjct: 127 QLGAMRISEEIDALEVMAIPSLPFLVTTRIIAGLIAVVPLYVVGLLSSYFATRLTVTTFY 186

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   FH      ++     K    A  + +V    G+        +G  V   V
Sbjct: 187 GQSTGTYDHYFHLFLPPGDVLWSFGKVLVFAVLVILVHCYHGYHASGGPAGVGVAVGRAV 246

Query: 351 VQSISIVIIIDSLFAI 366
             SI ++ ++D L ++
Sbjct: 247 RTSIVVINVVDLLLSM 262


>gi|42523258|ref|NP_968638.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100]
 gi|39575463|emb|CAE79631.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100]
          Length = 274

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 128/266 (48%), Gaps = 2/266 (0%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
             S       +G+ + K +  +     ++   +S        +  F+  +  +  Q+Y+ 
Sbjct: 1   MTSLLAQIDSLGRSVTKNLEYTARVLLMV--YLSLRATILDRAQGFRQIVGVISAQIYFT 58

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G   +P++ +++  TG++I  Q    LS  G      + + ++ +RE G LL A+++  R
Sbjct: 59  GWQALPLISVLALGTGSIILLQSLSNLSLLGGTQMIGNFLIVMIVREAGPLLVALVVIAR 118

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SG+A+ +E+G+M+ N EI+A+ +MG++ +  ++ PR+   IIS+  L    NF A+IG  
Sbjct: 119 SGTAVASEVGNMRANREIEALESMGINPLSFIVFPRVLGGIISVLGLAFYFNFIALIGGF 178

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V     D+P A +           ++   L+K  F    I +V   +G +V    + + 
Sbjct: 179 LVTKFVQDLPLAFYTDSLMRAFAKEDVLIFLLKNGFSGMIIFVVCCYQGLSVKRSPHEVP 238

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369
           +  T  VV SI  V++ + +    ++
Sbjct: 239 QVTTQAVVNSIIFVVVFNLIVTALFY 264


>gi|257054989|ref|YP_003132821.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584861|gb|ACU95994.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 281

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 105/261 (40%), Gaps = 10/261 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG------- 167
           +++   ++   S    LG  +  +    A   +  + +   ++R +  V           
Sbjct: 8   QRVAHTLDRRLSFLDTLGESVLFSLRALAWIPRALRRYPREIVRLLAEVSFGSGALAVIG 67

Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V++ ++  TG V+  QG   L Q G   F+  + +    REI  L+  + ++   G
Sbjct: 68  GTIGVMVGMTMFTGIVVGLQGYTALDQVGTAAFAGFISAYFNTREIAPLVAGLALSATVG 127

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++GSM+I+EEIDA+  MG+  V  L++ R+ A   ++  L  +   ++ + +  +
Sbjct: 128 CGFTAQLGSMRISEEIDALEVMGVPSVPYLVTTRVIAGFCAIIPLYAIGLLTSYVASRQI 187

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
              +Y      +   F       ++     K    +  + +     GF        +G  
Sbjct: 188 TVWFYGQSEGTYDHYFELFLPPEDVLWSFGKVLLFSVVVVMTHCYYGFRASGGPAGVGVA 247

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  +I  V ++D   ++
Sbjct: 248 VGRAVRTAIVAVALLDFFASL 268


>gi|118581609|ref|YP_902859.1| hypothetical protein Ppro_3208 [Pelobacter propionicus DSM 2379]
 gi|118504319|gb|ABL00802.1| protein of unknown function DUF140 [Pelobacter propionicus DSM
           2379]
          Length = 256

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 1/246 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                  H L    S  G   A  ++   +    + Q   +G + + + +L    +G V+
Sbjct: 8   RVLIRFFHGLQSYFSLGGGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVM 67

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q   QL  F A  +   +++   ++E+G +L ++M+AGR GSAI AE+G+M + E++D
Sbjct: 68  ALQALIQLKPFAATSYVGGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVD 127

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R  G D ++ L +PR+ A+++++PLLT+  +  +++G  ++   Y  I   ++ S   
Sbjct: 128 AMRVEGTDIIQRLATPRLKAMLLAMPLLTVATDVISLVGGYVMSAGYG-INPIMYVSGLS 186

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                 ++  GL+K  F    I +     G      +  +G      VV S   +++ D 
Sbjct: 187 QFMVFQDLIEGLVKPLFFGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVTILVSDF 246

Query: 363 LFAIFY 368
             +  +
Sbjct: 247 FISKIF 252


>gi|224025978|ref|ZP_03644344.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM
           18228]
 gi|224019214|gb|EEF77212.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM
           18228]
          Length = 247

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 1/243 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG  +   G   A   + + +    I +M  +G++ + +V+LISF  GAVI  Q   
Sbjct: 5   ISTLGKYLMLMGRVFARPERIRMYFKQYINEMVQLGINSIGIVLLISFFIGAVICIQIKL 64

Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +       F        + L E    +  +++AG+ GS I +EIG+M++ ++IDA+  M
Sbjct: 65  NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 124

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I  L+  +PLL I + F+ IIGA    W    +               
Sbjct: 125 GINSASYLILPKILGLMTIIPLLVIFSIFAGIIGAFCTAWFAGIMNATDLEYGLQYCFIE 184

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             I+   IK+ F A  I  V+   G+ V   S ++GK  T  VV S  +++  D +    
Sbjct: 185 WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQL 244

Query: 368 YFA 370
              
Sbjct: 245 LMG 247


>gi|312141009|ref|YP_004008345.1| integral membrane protein yrbe4b [Rhodococcus equi 103S]
 gi|325675354|ref|ZP_08155038.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|311890348|emb|CBH49666.1| putative integral membrane protein YrbE4B [Rhodococcus equi 103S]
 gi|325553325|gb|EGD23003.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 286

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 7/259 (2%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167
              +K +  ++++  Q       I+ T          K  L  L    +  G        
Sbjct: 17  RWARKPLDVLDNAGEQMSFYSRAIAWTPRTLRRYR--KEMLRLLAEVTFGSGALAVIGGT 74

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V++++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G  
Sbjct: 75  IGVIVMMSGFTGVVVGLQGFAALDQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCG 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + +V  
Sbjct: 135 FTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVVST 194

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +       +   F+      ++     K    A  + ++    GF        +G  V 
Sbjct: 195 VFNGQSSGSYDHYFNLFLPPEDVLWSFGKVLVFAFVLILIHCYYGFHARGGPAGVGVAVG 254

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  +I  + ++D   ++
Sbjct: 255 HAVRTAIVTIAVLDFFLSL 273


>gi|226364103|ref|YP_002781885.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242592|dbj|BAH52940.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 264

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 99/236 (41%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   + + E     +K        ++Q +++    +   +L++     +   Q    L+
Sbjct: 26  VGAFYATSMETVRCMFKRPFHAREFVQQAWFIAGVSIMPALLMAIPFCMMFVYQINILLA 85

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S     +  +REIG ++T +++AG   +AI A++GS  I EEIDA++ +G+D 
Sbjct: 86  EIGAVDLSGAGAGVAIIREIGPVVTVLVVAGAGSTAICADLGSRTIREEIDAMKVLGIDP 145

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           ++ L  PR+ A  +    L  L +   ++G  I            + +       L +  
Sbjct: 146 IQRLCVPRVLASTLIGMFLNGLVSAVGLVGGYIATVYMQGASPGQYVTAISILTGLPDFL 205

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +KA       G+VA   G         +G  V   VV S  ++ + +S+    
Sbjct: 206 VSEVKAAVFGMLAGLVACHLGLNAKGGPKGVGDAVNQTVVFSFLLLFLANSVITTL 261


>gi|326382983|ref|ZP_08204672.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198119|gb|EGD55304.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 268

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 112/256 (43%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + K            G ++    +     +         I+Q +++    +    LI+
Sbjct: 7   RGVDKLAKAGEGALAQTGNIVQLFVDVARQLFVRPFQWREFIQQAWFIASVTILPTALIA 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA+++ Q    + Q GAE ++     ++ +++   L+T++++AG +GSA+ A++GS 
Sbjct: 67  IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVVQQGSPLVTSLLVAGAAGSAVAADLGSR 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            I EEIDA+  +G++ V+ L+ PR+ A+++   LL  L     I G              
Sbjct: 127 TIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVAVVGIGGGYFFNVVVQGGTPG 186

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + + F + A L +++   +KA       G+VA  +G         +G  V   VV +  
Sbjct: 187 AYLASFGALAQLPDLYISTLKAVIFGVIAGVVAAYKGLNPKGGPKGVGDAVNQSVVVTFL 246

Query: 356 IVIIIDSLFAIFYFAI 371
           ++   + +    +  I
Sbjct: 247 LLFFANLIITAVFLQI 262


>gi|262196627|ref|YP_003267836.1| hypothetical protein Hoch_3441 [Haliangium ochraceum DSM 14365]
 gi|262079974|gb|ACY15943.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 258

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 111/230 (48%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G  +      +       G + +   E   +    +     +I QMY +GV  +P+V L 
Sbjct: 4   GAPLRALGRSALGLCRDTGGIAALGVEVVRALVPPRIDGRMVIDQMYKMGVQSLPIVALA 63

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +F  G ++A Q    + Q GA             RE+G ++ A+M +GR G+   A++G+
Sbjct: 64  AFFAGVLMALQSGVIVRQLGATSLLGWGGGFAIFRELGPVVIALMFSGRVGANNAADLGN 123

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MKI E++D +R + +D VR L++PRI A++ +L  LTI+ N  A+ G ++     +D+ F
Sbjct: 124 MKITEQLDGLRALAIDPVRYLVAPRIVAMVGALVSLTIIGNSIALQGGTVFSMLLFDVEF 183

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
              F+      +  ++  G+IK+      I + +   G +V   +  +G+
Sbjct: 184 ITLFTSLVDNISPFDLLHGVIKSAVFGVFIALTSCYFGLSVRGGAVGVGR 233


>gi|119714948|ref|YP_921913.1| hypothetical protein Noca_0701 [Nocardioides sp. JS614]
 gi|119535609|gb|ABL80226.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 261

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 116/247 (46%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           + +     G   +   +   + +K    L   I+Q +++    +    L++   GAVIA 
Sbjct: 9   ALAPVGTAGKFFAFGLDVMRALFKRPFQLREFIQQAWFIASVTIIPTALVAIPFGAVIAL 68

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    + QFGA+ F+     +  +++   + TA++IAG  GSAI A++G+ KI EE+DA+
Sbjct: 69  QVGGLIKQFGAQSFTGSASVLAVVQQAAPIGTALLIAGAGGSAIAADLGARKIREELDAM 128

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+D ++ L+ PR+ A ++    L  L +   + G  +      D     + + F + 
Sbjct: 129 MVLGIDPIQRLVVPRVLAAMLVAVFLNGLVSVVGVAGGYVFNVILQDGTPGAYLASFTAL 188

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           + L +++ G+ KA        +VA  +G         +G  V   VV +  ++ I++ + 
Sbjct: 189 SQLPDLWQGMAKALVFGLIAAVVACYKGMNAAGGPKGVGDAVNESVVVTFILLFIVNFVM 248

Query: 365 AIFYFAI 371
           +  Y  +
Sbjct: 249 SAIYIQL 255


>gi|325954854|ref|YP_004238514.1| hypothetical protein Weevi_1232 [Weeksella virosa DSM 16922]
 gi|323437472|gb|ADX67936.1| protein of unknown function DUF140 [Weeksella virosa DSM 16922]
          Length = 250

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 3/233 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +      LG  +    +      KFK F   +IR++  +G+S + +V  IS   GAV+A 
Sbjct: 2   AMKLFENLGRYVLLMTKVFQKPIKFKYFWKLIIREVMDLGMSSLGIVTFISTFMGAVVAI 61

Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           Q A           + +      ++ + E    + ++++AG+ GS I + IG+M++ E+I
Sbjct: 62  QMAQNFRGSEIPVPDAYIGYATKVVLVLEFSPTIVSLILAGKVGSYIASSIGTMRVTEQI 121

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  MG++    LI P+I A +   P L  ++    I+G  ++           F    
Sbjct: 122 DALDVMGINSPNFLILPKIIACVFFFPFLIAISIGFGILGGHLIGVFTKMWAPVDFVQGL 181

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
                L        K    A  I  V    G+ V   S  +G+  TT VV + 
Sbjct: 182 QMGMALKFYIYTFFKTMVFAFVIATVPAYYGYYVSGGSLEVGRSSTTAVVWTS 234


>gi|90408209|ref|ZP_01216376.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3]
 gi|90310655|gb|EAS38773.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3]
          Length = 259

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 133/255 (52%), Gaps = 2/255 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +     +S +   + G                K      I Q++ +G+  +P+++     
Sbjct: 6   VSAVGRESLALIQVSGRACLLLTRTL-CVKPHKKLFSLFIVQIFQLGILSLPIILTAGLF 64

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ QG + L  + AE     ++++  LRE+G +++A++ AGR+GSA+ AEIG M+ 
Sbjct: 65  IGMVLSLQGYYVLVAYAAEENLGSMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMQS 124

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ ++  MG+  ++ +++PR+ A +I+LP+LT+L N  AI G  ++   +  I    F
Sbjct: 125 TEQLASMEMMGVSPLKRVLAPRLLAGVITLPMLTLLFNVFAIWGGYLIGVHWMGIDAGSF 184

Query: 298 FSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +S    +    +++  G+IK+   A  I  VA+  G+ V  ++  + +  TT VV S  +
Sbjct: 185 WSVMQGSVDLFSDVGNGIIKSVIFALIITWVALYNGYYVIPNAQGISRSTTTTVVVSSLL 244

Query: 357 VIIIDSLFAIFYFAI 371
           ++ +D +  +F F +
Sbjct: 245 ILAMDFILTVFMFGM 259


>gi|254447411|ref|ZP_05060877.1| ABC transporter permease protein [gamma proteobacterium HTCC5015]
 gi|198262754|gb|EDY87033.1| ABC transporter permease protein [gamma proteobacterium HTCC5015]
          Length = 290

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 113/259 (43%), Gaps = 2/259 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G+ +V+          ++ L +  +      + + +  L  +  Q+Y+ G   +    
Sbjct: 26  QVGRYVVQRTVFLFELLRLIYLGVRTSWFEQGYASRAR--LAVIGAQVYHTGFKALGTAT 83

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++ V GA++  Q + QL   G       ++ ++ +RE+  L+TA ++  RSG+A+  E+
Sbjct: 84  PLAVVAGALVIFQASNQLYIVGGREHIGQIVIMIVVRELAPLVTAFIVIARSGTAVATEV 143

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
            +M+ N EI+++  +G+     ++ PRI A +I+   L      +A+ G   V   + ++
Sbjct: 144 ANMRANHEIESLEALGIHPYAYVVFPRIMAGMIATICLAFYFMVAAMYGGYFVTVPWSNL 203

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
             + +F        + +    + K       I  ++   G  V    + +    T  V+ 
Sbjct: 204 NVSTYFYALDEAIQIRDYVLFITKTLVSGALIFSISCYYGLQVKQGHDEVPIATTRAVIH 263

Query: 353 SISIVIIIDSLFAIFYFAI 371
           ++S +I  +   ++ ++  
Sbjct: 264 ALSYIIFFNLAASVVFYVY 282


>gi|84684701|ref|ZP_01012601.1| membrane protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84667036|gb|EAQ13506.1| membrane protein [Rhodobacterales bacterium HTCC2654]
          Length = 244

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 104/243 (42%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G V                +   L R    +G   +PVV L +  TGA +A Q  
Sbjct: 1   MLRRIGSVTLFFLNAVIRFPATLRYPRELARAFLQIGWLSLPVVGLTAVFTGAALALQIY 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
              S+  AE     +++I  +RE+G ++  +MIA R  S+I AE+ +MK++E++DA+ T+
Sbjct: 61  AGGSRISAEAVVPQIVAIGIVRELGPVMVGLMIAARVTSSIAAELATMKVSEQVDALTTL 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
             D +  L +PR+ A ++++P+L  L +   + G  +V  +        + +   +    
Sbjct: 121 STDPMTYLTAPRVLAGLVTVPILVGLGDILGLFGGFVVATQGLGFNGPSYVTTSWNFLDP 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +I   L K          +A   G   G  +  +G    + V  +  +V+  +      
Sbjct: 181 VDIVLSLTKGAVFGGIAVTLACHAGLNAGRGAQGVGLATKSAVQAAAILVLAANVALTGL 240

Query: 368 YFA 370
           +F 
Sbjct: 241 FFG 243


>gi|162451969|ref|YP_001614336.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
 gi|161162551|emb|CAN93856.1| putative ABC transport system permease protein [Sorangium
           cellulosum 'So ce 56']
          Length = 285

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 3/278 (1%)

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148
                 +     +   +S           +      + S       + S          K
Sbjct: 2   PSPDKSSSDRPSAGPPSSELRDLAPEASGVAAIGAAALSLFQSARELYSVFVRTLYYCAK 61

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQ 207
            +    ++++QMY +G   +  + ++    G ++  Q   Q  +   +          L 
Sbjct: 62  GRREPGAVLQQMYEIGNKSLFFLTVVMGFIGMIMVFQAGQQAKRVIPDLTMLGATYLELL 121

Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267
           +R++   + A+M+A R G+ I AEIGSM + E++DA+R    D +  LI PR  A ++  
Sbjct: 122 VRDLAASIAALMLATRVGAGIAAEIGSMVVTEQVDALRMCAADPIDYLIKPRFIASLLMT 181

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
             L + +   +     +  +  +D+    F +   S     ++ TGL K      AI +V
Sbjct: 182 TCLIVWSAAVSFTTGMVTAYSMFDVSPETFMN--VSLVDAGDLATGLAKCVAYGAAIPVV 239

Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +   G +    S  +G   T  VV S   VI+++ L +
Sbjct: 240 SGHSGLSTFGGSEGVGWATTRAVVNSSLAVIVLNMLIS 277


>gi|163786261|ref|ZP_02180709.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium
           ALC-1]
 gi|159878121|gb|EDP72177.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium
           ALC-1]
          Length = 245

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 96/232 (41%), Gaps = 2/232 (0%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
             H +G       +      K+      +++ +  + +  + +V  I+F  G V+A Q +
Sbjct: 3   YLHNIGAYFIMIKDIFRKPTKWSVMKTLILKDIDDLIIGSLGIVAFIAFFVGGVVAIQTS 62

Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
             ++      +          + E      ++++AG+ GS I + IG+M++ E+IDA+  
Sbjct: 63  LNINNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEV 122

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MG++ +  L+ P+  AL +  P +  +A F  ++G  +            +     +   
Sbjct: 123 MGINAINYLVFPKFIALTL-YPFVISIAMFLGVLGGMVACVYGGYGTLEDYIQGIQTDFI 181

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             +I    IK    A  +  +    G+ +   +  +GK  TT  V +  ++I
Sbjct: 182 PFHIVYAFIKTLVFAFILATIPSFYGYFMKGGALEVGKASTTSFVWTSVVII 233


>gi|295690359|ref|YP_003594052.1| hypothetical protein Cseg_2991 [Caulobacter segnis ATCC 21756]
 gi|295432262|gb|ADG11434.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756]
          Length = 266

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 115/250 (46%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           I      +      +G V    G            L    RQ+  +G   +PVV L +  
Sbjct: 12  IRSLGARATIAVRAVGAVGLFAGRGVICILTPPWRLGHWGRQLTTIGFFSLPVVALTALF 71

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TGA +A        +  A      ++++   RE+G +L A+M+AGR  +AI AEIG+M+ 
Sbjct: 72  TGAALALNIHIGGGRLNAAQAMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 131

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+RT+  D +R L++PR+ A +++LPLLT++A+   + G  +V     D     +
Sbjct: 132 TEQLDAMRTLSTDPIRYLVAPRLAAAVLALPLLTLVADIIGVAGGGVVAVGVLDFSAPTY 191

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                   T  +I +GL+KA      + ++    G+     +  +G+  T  VV +  ++
Sbjct: 192 ARAAARFLTGWDIGSGLVKAAVFGFVVALMGCYHGYVATGGARGVGRATTRAVVSAAILI 251

Query: 358 IIIDSLFAIF 367
              D L    
Sbjct: 252 FACDYLLTTL 261


>gi|262201122|ref|YP_003272330.1| hypothetical protein Gbro_1129 [Gordonia bronchialis DSM 43247]
 gi|262084469|gb|ACY20437.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 275

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 7/251 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173
           +K ++ +  Q    G  ++   +        +  L  L    +  G        + V++L
Sbjct: 12  LKVLDGAGEQMSFYGRTLAWMPKTLVHYT--REVLRLLAEVAFGSGGLAVIGGTIGVMVL 69

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S  TG V+  QG   L Q G++  +  L + +  RE+  L+  + ++   G    A++G
Sbjct: 70  MSGFTGVVVGLQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQLG 129

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I+EEIDA+ TM +  +  L+S R+ A  +++  L +L   SA + + ++   +    
Sbjct: 130 AMRISEEIDALETMAVPSIPFLVSTRVIAGFVAVIPLYVLGLLSAYLASRVITTVFNGQS 189

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+     A++     K    A  I +V    G+        +G  V   V  +
Sbjct: 190 GGSYDHYFNLFLPPADVLWSFGKVLVFAFVIILVHCYYGYYASGGPAGVGVAVGHAVRAA 249

Query: 354 ISIVIIIDSLF 364
           + ++ I+D   
Sbjct: 250 LVLIAILDFFL 260


>gi|111018969|ref|YP_701941.1| hypothetical protein RHA1_ro01972 [Rhodococcus jostii RHA1]
 gi|110818499|gb|ABG93783.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 274

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 108/259 (41%), Gaps = 7/259 (2%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167
            +G+  +  ++ +  Q       I+ +          K  L  L    +  G        
Sbjct: 5   RVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVHYR--KEVLRLLAEVTFGSGALAVIGGT 62

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G  
Sbjct: 63  IGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCG 122

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + I+  
Sbjct: 123 FTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRIIST 182

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +       +   F+      ++     K    A  + ++    G+        +G  V 
Sbjct: 183 VFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGYHASGGPAGVGVAVG 242

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  +I  + ++D   ++
Sbjct: 243 RAVRTAIVTIAVLDFFLSL 261


>gi|226361064|ref|YP_002778842.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239549|dbj|BAH49897.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 108/259 (41%), Gaps = 7/259 (2%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167
            +G+  +  ++ +  Q       I+ +          K  L  L    +  G        
Sbjct: 17  RVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVHYR--KEVLRLLAEVTFGSGALAVIGGT 74

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+ ++S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G  
Sbjct: 75  IGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCG 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + ++  
Sbjct: 135 FTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVIST 194

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +       +   F+      ++     K    A  + ++    G+        +G  V 
Sbjct: 195 VFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLIFAFVLILIHCYYGYHASGGPAGVGVAVG 254

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  +I  + ++D   ++
Sbjct: 255 RAVRTAIVTIAVLDFFLSL 273


>gi|296139954|ref|YP_003647197.1| hypothetical protein Tpau_2249 [Tsukamurella paurometabola DSM
           20162]
 gi|296028088|gb|ADG78858.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 279

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 9/254 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172
           +K ++ +  Q    G  I    +  A   ++   +  ++ ++ +      V    V VV+
Sbjct: 17  LKVLDGAGEQMSFYGRSIGFIPQSIA---RYPKEVGRVLAEVAFGSGALAVIAGTVGVVL 73

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           ++   TG V+  QG   L Q GA + +  L + +  RE+  L+ A+ ++   G    A++
Sbjct: 74  MLCGFTGIVVGLQGNAALQQLGASVMTGFLSAYVNTRELTPLVAALAMSATVGCGFTAQL 133

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+I+EEIDA+  M +  +  L + R+ A  +++  L I+   ++ +    V       
Sbjct: 134 GAMRISEEIDALEAMAIPSISFLTATRVIAGFVAVIPLYIVGLLASYVMTRFVNTTLLGQ 193

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F+   +  ++     K    A  + +V    G+        +G  V   V  
Sbjct: 194 STGTYDHYFNLFLSPDDVLWSFGKVLVFAFVLVLVHCYYGYNASGGPAGVGVAVGRAVRT 253

Query: 353 SISIVIIIDSLFAI 366
           S+  + ++D   ++
Sbjct: 254 SLVAIALLDFFLSL 267


>gi|227206406|dbj|BAH57258.1| AT1G19800 [Arabidopsis thaliana]
          Length = 201

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 97/191 (50%)

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
                Q   + ++ G       ++++   RE+  ++T++++AGR GSA  AE+G+M+++E
Sbjct: 1   MAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSE 60

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           + D +R +G D +  LI+PR+ A  ++LP LT++     +  ++++    Y I   +   
Sbjct: 61  QTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMD 120

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
             H      +I + +IK+      I +++   G      +  +G+  T+ VV S+  + I
Sbjct: 121 SAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFI 180

Query: 360 IDSLFAIFYFA 370
            D + + F+F 
Sbjct: 181 ADFVLSSFFFQ 191


>gi|149921451|ref|ZP_01909903.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Plesiocystis pacifica
           SIR-1]
 gi|149817654|gb|EDM77121.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Plesiocystis pacifica
           SIR-1]
          Length = 251

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 112/249 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G ++    +   +++    +L   +  M  +    +  V L     GAVI+ 
Sbjct: 3   LLRMLQTIGGLVVFMAQVARATFSRPFYLRQTLDIMAILVQRCIVPVGLAVAPVGAVISL 62

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG      FGAE      +    +RE    L +VM+A ++GS+I A IG+MK+  +IDA+
Sbjct: 63  QGIAVFKLFGAERMLSAFLGTAIIREYSPALASVMVAAQAGSSIAARIGTMKVRGQIDAL 122

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             M +D VR ++ P + A ++  PLL+++ N   I+   I       +    F     + 
Sbjct: 123 AVMSVDPVRYVVVPGVLACVLVTPLLSVVTNLLGILSGWIFAVPLGGVDHGAFMDNLTAQ 182

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            T  +++ GL K       +G++A   G  VG  +  +GK     VV +I +++  D + 
Sbjct: 183 ITPMDLWVGLGKCAVFGLGVGMIAGYLGLNVGRGAADVGKAANDTVVSTIVLILFTDYVV 242

Query: 365 AIFYFAIGI 373
           ++     G+
Sbjct: 243 SMALLGAGL 251


>gi|254797049|ref|YP_003081887.1| ABC transporter permease protein [Neorickettsia risticii str.
           Illinois]
 gi|254590296|gb|ACT69658.1| ABC transporter permease protein [Neorickettsia risticii str.
           Illinois]
          Length = 250

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 118/246 (47%), Gaps = 2/246 (0%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             N   +   ILG           S  K   + L +I+Q++ +G   +P+V   +   GA
Sbjct: 1   MYNHIKNTIKILGDFTLFNLNIFLSGRKM--YFLEIIKQLFLIGYYSMPIVAFSAVFMGA 58

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L  F ++     +++    REIG ++  +++AGR  S I AEIG+M++ E+
Sbjct: 59  MLALHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           +D +R++ ++    L+ P+I A +IS P+L I++    ++G  ++    +     ++ S 
Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIISALFGMLGGYLIGTYKFAFSKMLYISD 178

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +  T A++ +G+ KA F       V+          +  +G  VT  VV S  ++++ 
Sbjct: 179 TLTFITYADLMSGMTKAFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238

Query: 361 DSLFAI 366
           + L  +
Sbjct: 239 NYLITL 244


>gi|86143923|ref|ZP_01062291.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829630|gb|EAQ48093.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis
           MED217]
          Length = 245

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 93/246 (37%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +GL             K       +++++  + +  + +V  ISF  G V+A Q
Sbjct: 1   MGYLKEIGLYFMMLKGVFIKPTKTSVLRNLVLKEIDDLIIGSLGIVCFISFFVGGVVAIQ 60

Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  +                  + E      ++++AG+  S I + IG+M++ E+IDA+
Sbjct: 61  TALNMDNPILPKSLIGFASRQSIILEFAPTFISIIMAGKVSSFITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I A++   P +  +A F  I+G               F       
Sbjct: 121 EVMGINSLNYLVFPKIIAMLF-YPFVIAIAMFLGILGGYTAAVLGGFATGDQFIQGLQED 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +    IK    A  +  +    G+ +   +  +GK  TT  V +   +I+ + L 
Sbjct: 180 FVPFQLVYAFIKTFVFAILLATIPSYFGYYMKGGALEVGKASTTSFVWTSVFIILSNYLI 239

Query: 365 AIFYFA 370
                +
Sbjct: 240 TQLLLS 245


>gi|257054443|ref|YP_003132275.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584315|gb|ACU95448.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 279

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 10/259 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG------- 167
           + +    N       +LG  +S      A + +  + +   ++R +  V           
Sbjct: 6   QNVKNLANRPLRTLDMLGDQMSFYLRALAWTPRAIRRYSKEVLRLLAEVSFGSGSLAVIG 65

Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V++ ++  TG ++  QG   L   G   F+  L S    REI  L+  + ++   G
Sbjct: 66  GTVGVMVGLTLFTGVLVGLQGFSALDSIGTSAFTGFLTSFFNTREIAPLVAGLALSATVG 125

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           S   A++G+M+I+EE+DA+  MG+  +  L++ RI A  I++  L I+   S+ + +  V
Sbjct: 126 SGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRIIAGFIAIIPLYIIGLLSSYLASRTV 185

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           +   Y      +   F       ++F   +K    +  I +     G+        +G  
Sbjct: 186 VVYLYGQSAGTYDHYFDMFLPPEDVFYSFVKVLIFSVLIILTHCYYGYRATGGPAGVGVA 245

Query: 346 VTTCVVQSISIVIIIDSLF 364
           V   V  SI  V +++   
Sbjct: 246 VGKAVRLSIVTVAVVNFFI 264


>gi|326336634|ref|ZP_08202802.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691104|gb|EGD33075.1| ABC superfamily ATP binding cassette transporter permease protein
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 273

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 2/240 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
                 +       +G       E      K+      +++++  +  S + ++  IS  
Sbjct: 21  TFALSKNKMKHLEAIGRYFLMIYEIFRKRTKWSIMKKLIMKEIDDLMYSSLGIIAFISLF 80

Query: 178 TGAVIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            GAVIA Q A  +      +           + E     T++++AG+ GS I + IG+M+
Sbjct: 81  VGAVIAIQMALNIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMR 140

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + E+IDA+  MG++ +  LI P+I AL++  P    +A    I G  I     +    A 
Sbjct: 141 VTEQIDALDIMGVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAE 199

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F           +I   LIK+   A  +  +    G+ +   +  +GK  T   V +   
Sbjct: 200 FLEGLKLQFRSFDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTVSFVWTSVA 259


>gi|317125894|ref|YP_004100006.1| hypothetical protein Intca_2778 [Intrasporangium calvum DSM 43043]
 gi|315589982|gb|ADU49279.1| protein of unknown function DUF140 [Intrasporangium calvum DSM
           43043]
          Length = 256

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 115/247 (46%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G + +   +   +  +    +   I+Q +++    +    L+S   GAVIA 
Sbjct: 5   VTGVLRQSGSLFALALDVLRALPRRPFQVKEFIQQSWFLASVTILPTALVSIPFGAVIAL 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q      Q GA+ ++     +  LRE   ++TA++IAG  GSAI A++GS KI EEIDA+
Sbjct: 65  QLGTLTRQLGAQSYTGAASVLAVLREASPIVTALLIAGAGGSAICADLGSRKIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+  ++ L+ PR+ A ++   LL  L +   ++G  +            + + F + 
Sbjct: 125 EVLGISPIQRLVVPRVLASMLVAVLLNGLVSVVGVVGGYVFNVIVQGGTPGAYIASFTAM 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A L +++ G +KA       GIVA  +G   G     +G  V   VV +  ++ +++ + 
Sbjct: 185 AQLPDLWAGELKALVFGAIAGIVAAHKGLTAGGGPKGVGDAVNQSVVITFMLLFVVNFVI 244

Query: 365 AIFYFAI 371
              YF +
Sbjct: 245 TAVYFQV 251


>gi|189423561|ref|YP_001950738.1| hypothetical protein Glov_0490 [Geobacter lovleyi SZ]
 gi|189419820|gb|ACD94218.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 257

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 118/231 (51%), Gaps = 1/231 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
              +     +    +      Q   +G S + + +L    TG V+A Q   QL  F A  
Sbjct: 24  LAWQAFVRIFHKPYYYRDFAIQFDKLGFSSLFICVLTGLFTGMVMALQALIQLKPFAATS 83

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           +   ++++  ++E+G +L A+M+AGR GSAI AE+G+M + E++DA+R  G D ++ L++
Sbjct: 84  YVGGMVAVTMIKELGPVLAALMVAGRVGSAITAELGTMVVTEQVDAMRVEGTDIIQRLVT 143

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A++++LPLLTI+ +  +++G  ++    Y I   ++ S F       +   G+ K 
Sbjct: 144 PRLKAMLLALPLLTIITDAVSMLGGYLIASG-YSISPVMYLSTFTQFMVPLDYLEGVTKP 202

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
              A  I +++ + G   G  +  +G      VV S  +V++ D   A  +
Sbjct: 203 LVFAFLITMISCQTGLNTGGGAEGVGAAAKRAVVLSSVLVLMCDFFIAKIF 253


>gi|307718422|ref|YP_003873954.1| transporter [Spirochaeta thermophila DSM 6192]
 gi|306532147|gb|ADN01681.1| putative transporter [Spirochaeta thermophila DSM 6192]
          Length = 263

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
            ++   +G + +   +D       +  VI  T  F     +       L+ Q+ + GV  
Sbjct: 3   GDILSSLGNRAIARTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+ L++   GA+I  QG   L QFG       ++  +  RE+G +LTA ++  RSG+A
Sbjct: 61  LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I  EIG+M ++ EI+A    G+D +  L+ PR    I+++ LL +  N   ++G+  V  
Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             + I FA +F          +I + L+K+      I +V    GF V   S  + +   
Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             V +     I+ D+L  + Y+
Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262


>gi|300783702|ref|YP_003763993.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793216|gb|ADJ43591.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 283

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 108/260 (41%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG-------- 167
           ++ + ++        LG  I       A + +  + +L  ++R +  V            
Sbjct: 11  RVREAVDRRFGFLDTLGDQILFFIRAIAWTPRALRRYLREVVRLLAEVSFGSGALAVIGG 70

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V+I ++  TG V+  QG   L+Q G   F+  + +    REI  L++ + ++   G 
Sbjct: 71  TIGVMIGMTVATGTVVGLQGYSALNQVGTSAFAGFVSAYFNTREIAPLVSGLALSATVGC 130

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+I+EEIDA+  MG+  V  L++ R+ A  +++  L  +   S+ + +  + 
Sbjct: 131 GFTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFLAVIPLYAIGLLSSYLASRQIT 190

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             ++      +   F       ++     K    +  + +     GF        +G  V
Sbjct: 191 VWFFGQSAGTYDHYFLLFLPPGDVLWSFGKVLVFSIVVVLAHCYYGFRASGGPAGVGVAV 250

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  +I  + ++D   ++
Sbjct: 251 GRAVRTAIVAISVLDFFLSL 270


>gi|226305213|ref|YP_002765171.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229490562|ref|ZP_04384400.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226184328|dbj|BAH32432.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229322382|gb|EEN88165.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 286

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 7/253 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173
           V  ++ +  Q       I+ T          K  L  L    +  G        + V+ +
Sbjct: 23  VNALDRAGEQMSFYARAIAWTPRTLHRYR--KETLRLLAEVTFGSGALAVIGGTIGVIAM 80

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S  TG V+  QG   L Q G+ + +  L + +  REI  ++ A+ ++   G    A++G
Sbjct: 81  MSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFTAQLG 140

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+   +A + + ++   +    
Sbjct: 141 AMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVISTVFNGQS 200

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+      ++     K    A  + ++    GF        +G  V   V  +
Sbjct: 201 TGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGFHASGGPAGVGVAVGRAVRAA 260

Query: 354 ISIVIIIDSLFAI 366
           I  + ++D   ++
Sbjct: 261 IVTIAVLDFFLSL 273


>gi|54027028|ref|YP_121270.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018536|dbj|BAD59906.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 284

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 98/234 (41%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
              E   +    +      IRQ  ++        + ++     V++ Q    ++Q GA  
Sbjct: 45  AVIELFRALAARRFPYHEFIRQCAFMSNVSAAPTVFVAIPIAVVVSIQVGALVNQVGATT 104

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F   +  +  +R+   L+T++MIAG  GSAI A++GS  I EEIDA+  MG++ VR L++
Sbjct: 105 FIGAVAGLGIIRQGAPLVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRRLVA 164

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A ++   LL     F     A +            F   F S A  +++   L+KA
Sbjct: 165 PRLVAAVLVSMLLCGFIVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKA 224

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                   I+A   G         +   V + VV S  ++   + +    Y  +
Sbjct: 225 AIFGALTAIIACDIGLHAKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTL 278


>gi|315185558|gb|EFU19327.1| protein of unknown function DUF140 [Spirochaeta thermophila DSM
           6578]
          Length = 263

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
            ++   +G + +   +D       +  VI  T  F     +       L+ Q+ + GV  
Sbjct: 3   GDILSSLGNRAITRTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+ L++   GA+I  QG   L QFG       ++  +  RE+G +LTA ++  RSG+A
Sbjct: 61  LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I  EIG+M ++ EI+A    G+D +  L+ PR    I+++ LL +  N   ++G+  V  
Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             + I FA +F          +I + L+K+      I +V    GF V   S  + +   
Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240

Query: 348 TCVVQSISIVIIIDSLFAIFYF 369
             V +     I+ D+L  + Y+
Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262


>gi|296394453|ref|YP_003659337.1| hypothetical protein Srot_2050 [Segniliparus rotundus DSM 44985]
 gi|296181600|gb|ADG98506.1| protein of unknown function DUF140 [Segniliparus rotundus DSM
           44985]
          Length = 290

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 3/279 (1%)

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKG 151
           +             F      I    + F          LGLV+        S  +  + 
Sbjct: 1   MTAPARYYPPLVAPFVRGVKAIFNGPLNFFEQMGHVLTFLGLVLGAIPHTFRSYGRQIRD 60

Query: 152 FLLSLI--RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            L+ L        VG   + V+ ++    G VI  +G   LS      F+  + +    R
Sbjct: 61  TLIDLTWGNGRIIVGGGTLSVLAVLGLSIGGVIGLEGYNALSIINIAPFTSFVSAYGMTR 120

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E G L  A+  A ++G  I AEIG+M+I EEIDA+   G+  +  +++ R+ A +  +  
Sbjct: 121 EFGPLAAALGFAAQAGCRITAEIGAMRIAEEIDALEATGIRSIPFVVTTRVIAGVAVILP 180

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           + +L         S+V+   +      +   F       ++   LIK      A+ ++  
Sbjct: 181 VYLLTLILGYEACSLVVNVLHSQSSGTYDYNFSHFLVPRDVVLSLIKTAVFIVAVVMIHG 240

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +G+        +G      +  SI IV +++    +F+
Sbjct: 241 YQGYYASGGPEGVGLASGRAIRSSIVIVTVLNMFLTLFF 279


>gi|119717049|ref|YP_924014.1| hypothetical protein Noca_2825 [Nocardioides sp. JS614]
 gi|119537710|gb|ABL82327.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 279

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 104/256 (40%), Gaps = 10/256 (3%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VP 169
            F           G  +    +  + + +  + +   ++  +  V             V 
Sbjct: 10  SFYRGRRDSLEQYGDQLLFYVKALSWTPRAIRRYPREIVNTLAEVTFGAGGLSLIAGTVG 69

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+  ++F  G  +  QG   LSQ G   FS  + +    RE+  L++A+ +A   G    
Sbjct: 70  VIAFLAFFAGTEVGIQGYASLSQIGVAKFSAFISAYFNTREVAPLVSAIALAATVGCGYT 129

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A +G+M+I+EEIDA+  MG+  +  L++ R+ A  +++  L ++A  ++ +   ++    
Sbjct: 130 ARLGAMRISEEIDALEVMGIPSLPFLVTTRMVAAFVAVIPLYVVALSASYLSPRLITTLV 189

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y      +   F       ++     K  F+A A+ ++    G+        +G  V   
Sbjct: 190 YGQSPGTYDHYFLQFLPPIDMLWSFFKLLFLAAAVILIHCYYGYTASGGPAGVGMAVGRA 249

Query: 350 VVQSISIVIIIDSLFA 365
           +  SI  +++ D   +
Sbjct: 250 IRTSIVTIVVADFFLS 265


>gi|298208113|ref|YP_003716292.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus
           HTCC2559]
 gi|83850754|gb|EAP88622.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus
           HTCC2559]
          Length = 233

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 2/230 (0%)

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAEIFSI 200
                 K       +++++  + +S + +V  ISF  GAV++ Q A  L+     +    
Sbjct: 5   VFGRMTKQSVLRGLILKEIDDLIMSSLGIVTFISFFIGAVVSIQTALNLNNPLIPKELIG 64

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
                  + E      +V++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+ P+I
Sbjct: 65  FAARQSIILEFAPTFISVIMAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNYLVLPKI 124

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A++I  P L  +A F  I+GA +       +  + F S         ++    +K    
Sbjct: 125 VAMMI-YPFLIGIAMFIGILGAYMAGVYGGFLGSSEFLSGLQDDFISFHLVYAFLKTFLF 183

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           A  +  V    G+ +   +  +G+  T   V +  ++II + +      +
Sbjct: 184 AFILATVPAYHGYYMKGGALEVGQASTQSFVWTSVVIIITNYVLTQVLLS 233


>gi|326333403|ref|ZP_08199649.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325948799|gb|EGD40893.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 261

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 115/239 (48%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G + +   +   + ++        I+Q +++    +    L++   GAVIA Q    + Q
Sbjct: 17  GSLFAFGLDVGRAVFRRPFQFREFIQQAWFIASVTIVPTALVAIPFGAVIALQVGGLVQQ 76

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
           FGA+ F      +  +++   + TA+++AG  GSAI A++G+ KI EE+DA+  +G+D +
Sbjct: 77  FGAQSFVGSAAVLAVVQQAAPIATALLVAGAGGSAIAADLGARKIREELDAMMVLGIDPI 136

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           + L+ PR+ A ++    L  L +   ++G  +            + + F + A +A+++ 
Sbjct: 137 QRLVVPRVLAAMMIAVFLNGLVSIVGVMGGYVFNVIIQGGTPGAYLASFTALAQMADLWQ 196

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           GL KA        IVA  +G   G     +G  V   VV +  ++ I++ + +  +  I
Sbjct: 197 GLAKALVFGLIAAIVAAYKGMNAGGGPKGVGDAVNESVVITFLLLFIVNFVMSAIFLQI 255


>gi|42525131|ref|NP_970511.1| ABC-type organic solvent resistance transporter, permease protein.
           [Bdellovibrio bacteriovorus HD100]
 gi|39577342|emb|CAE81165.1| ABC-type organic solvent resistance transporter, permease protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 259

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 112/243 (46%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             S    +G  +        +    K     +  Q++ V V   P   +  F  GA++  
Sbjct: 4   ITSLLDQMGATLLFLQRILRTMIFKKLKTHEIFEQIWKVTVDSFPTTAMAGFFVGAIMTV 63

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q A Q+ +FGA  +   L +    RE+G LL A M++G+ G+   AE+G+MK+ E+IDA+
Sbjct: 64  QFAMQVKEFGALGYLGALATSATFREVGPLLIAFMLSGKVGAFTSAELGTMKVTEQIDAV 123

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R +G D ++ +I PR   +I+S   L       ++ G  ++   +  + +  +       
Sbjct: 124 RCLGADPIQEIIVPRFVGIIVSSFFLLAAGLMMSVFGGMLLGELFAGVNYEEYLRHVPLI 183

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  +I +GL+K    A  +  +   +G+A    +  +G+ V    V ++  ++++D + 
Sbjct: 184 VSPVSILSGLVKCGTFAVVLATICTYQGYATTGGAKGVGRAVVATAVTTMICIVVMDWMT 243

Query: 365 AIF 367
           +  
Sbjct: 244 SFI 246


>gi|313204340|ref|YP_004042997.1| hypothetical protein Palpr_1873 [Paludibacter propionicigenes WB4]
 gi|312443656|gb|ADQ80012.1| protein of unknown function DUF140 [Paludibacter propionicigenes
           WB4]
          Length = 246

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            S  +  G  +       A   ++K F     +++  +G+  +P+V +IS   G ++  Q
Sbjct: 1   MSLLNNTGKYVLLMKRVFAKPDRWKMFFRQFPKELEKLGLQSLPIVAIISIFIGFIMTMQ 60

Query: 186 GAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                +     +++   +     L E    +  +++AG+ GS I +EIG+M+I E+IDA+
Sbjct: 61  TKLNTANPLLPVYTTGLVTRDTLLLEFSSTILCLILAGKVGSNIASEIGTMRITEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++    LI P+I A II +P L + +    I G   V      +    + +     
Sbjct: 121 EIMGVNSANYLILPKIAAFIIMMPFLVVFSMALGIFGGYFVGVLTSIMTTGDYLTGIQYA 180

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
                +F  LIK+   A  I  VA   G+     +  +GK  T  VV    +++  + L 
Sbjct: 181 FVPFYVFYSLIKSMIFAFIISSVAAYYGYYAYGGALDVGKASTNAVVNGSVLILFFNILI 240

Query: 365 AIF 367
              
Sbjct: 241 TKI 243


>gi|302525040|ref|ZP_07277382.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302433935|gb|EFL05751.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 272

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 104/259 (40%), Gaps = 10/259 (3%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG--------- 167
           +++ I+        LG  I           +  + +L  ++R +  V             
Sbjct: 1   MLEAIDRRLGFLDTLGDQILFFLRALGWVPRAVRRYLREIVRLLAEVSFGSGALAVIGGT 60

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G  
Sbjct: 61  IGVMVGMTVATGTVVGLQGYSALNQVGTSAFAGFISAYFNTREIAPLVAGLALSATVGCG 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  MG+  V  L++ R+ A  I++  L  +   S+ + +  V  
Sbjct: 121 FTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFIAVIPLYAVGLLSSYLASRQVTV 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             +      +   F       ++     K    +  + +     GF        +G  V 
Sbjct: 181 WGFGQSAGTYDHYFLLFLPPGDVLWSFGKVLIFSVVVVLAHCYYGFRASGGPAGVGVAVG 240

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  +I  + ++D   ++
Sbjct: 241 RAVRTAIVAISVLDFFLSL 259


>gi|300784333|ref|YP_003764624.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793847|gb|ADJ44222.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 262

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 116/245 (47%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G + + + E   + +K        I+Q ++     +    L++   GAVIA Q 
Sbjct: 12  AALTQVGRLATLSWEVLRAIFKRPFQAREWIQQCWFFASVTILPTALVAIPFGAVIALQL 71

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+    ++  +++   L+TA+++AG  GSA+ A+IG+ KI EEIDA+  
Sbjct: 72  GSLTAQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 131

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++ ++ LI PR+ A ++   LL  L +   ++G               + + F++ A 
Sbjct: 132 LGVNPIQRLIVPRVLAAMVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 191

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +++   IKA       G+VA   G         +G  V   VV +  ++ +I+ +   
Sbjct: 192 VPDLWVSEIKALLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 251

Query: 367 FYFAI 371
            Y  I
Sbjct: 252 IYLRI 256


>gi|269128028|ref|YP_003301398.1| hypothetical protein Tcur_3829 [Thermomonospora curvata DSM 43183]
 gi|268312986|gb|ACY99360.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 288

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 6/257 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILIS 175
           ++ +      LG V+ +         K+   LL  I  +        +G   + VV  ++
Sbjct: 25  LSTALDMPVFLGRVLYHLVVDIVLRRKYGKMLLRQISDITVGVGALVIGGGMIFVVATMA 84

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TGA++  QG   L + GAE FS  + S   +RE+  ++  V +  + GSA  AEIG+M
Sbjct: 85  MATGAMVGMQGYPSLERIGAEAFSGVMASFANVREVTPIIAGVALIAQVGSAFTAEIGAM 144

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I+EEIDA+  MG++ +  L+  R+ A +I+L  L +LA F++     ++  +Y+ +   
Sbjct: 145 RISEEIDALEVMGINSLTFLVCTRVAAGVIALLPLYLLALFASFFATRLITVQYFGLSPG 204

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++   F+      ++    IK    A  +  +    G+        +G      + +S  
Sbjct: 205 IYDYYFNLYLPPIDVLYSGIKVAVFAFVVMFIHCYRGYYATGGPVGVGVAAGRAIRESSV 264

Query: 356 IVIIIDSLFAIFYFAIG 372
            +I+I+ L +  ++  G
Sbjct: 265 AIIVINLLLSYIFWGHG 281


>gi|163754162|ref|ZP_02161285.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1]
 gi|161326376|gb|EDP97702.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1]
          Length = 233

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 2/233 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                 +   K+      + + +  + +  + +V  ISF  G V++ Q A  ++      
Sbjct: 1   MLQSVFSKMTKWSMLRKLIFKDIDDLIIGSMGIVCFISFFVGGVVSIQTALNMNNPLIPK 60

Query: 198 F-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
           +          + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+
Sbjct: 61  YLVGFATRQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGVNSLNYLV 120

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            P+I AL +  P +  +A F  I G  +          A F           ++    IK
Sbjct: 121 FPKIIALSL-YPFVITIAMFLGIFGGWLASIYGGFSTSADFIQGLQIEFIPFHVTYAFIK 179

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               A  +  +    G+ +   +  +GK  TT  V +  ++I+I+ L      
Sbjct: 180 TFVFAFVLATIPSFYGYYMKGGALEVGKASTTSFVWTSVVIILINYLITQLLL 232


>gi|326333402|ref|ZP_08199648.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325948798|gb|EGD40892.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 275

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 103/248 (41%), Gaps = 10/248 (4%)

Query: 129 AHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VPVVILISFVT 178
              LG  +       +   +  + +   ++R +  V +           V V++ ++F T
Sbjct: 15  LDHLGDELGFYLRAVSWFPRTLRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMTFFT 74

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA +   G   L Q G   FS  + +    REI  L+  + +A   G    A++G+M+I+
Sbjct: 75  GAQVGLSGYTALDQLGTSAFSGFVSAYFNTREIAPLVAGIALAATVGCGFTAQLGAMRIS 134

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EE+DA+  M +  +  L++ R+   +I++  L ++   S+ +     +  +Y      + 
Sbjct: 135 EEVDALEVMAIPSLPFLVTTRMIGGLIAIVPLYVVGLLSSYVATRFTVILFYGQSAGTYD 194

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F++     ++     K    A  + ++    G+        +G  V   V  SI  V 
Sbjct: 195 HYFNTFLPPVDVLWSFGKVLIFAVVVILIHCYHGYNASGGPAGVGVAVGKAVRTSIVAVS 254

Query: 359 IIDSLFAI 366
           ++D + ++
Sbjct: 255 VLDLMLSM 262


>gi|302523958|ref|ZP_07276300.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302432853|gb|EFL04669.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 262

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 109/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G + +   +     ++        I+Q ++V    +    L++   GAVI+ Q 
Sbjct: 12  GMLRETGNLFALGLDIVRGIFQRPFQFREFIQQAWFVASVTILPTALVAIPFGAVISLQF 71

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                Q GA+ ++     +  +++   L+TA+++AG  GSA+ A+IG+  I EEIDA+  
Sbjct: 72  GALARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIDAMEV 131

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V+ LI PR  A+++   LL  + +   ++G               + S F + A 
Sbjct: 132 LGVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLSSFSALAQ 191

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +++ G IKA        +VA   G         +G  V   VV +  ++ +++ +  +
Sbjct: 192 LPDLWVGEIKALIFGFIAAVVAAYRGLHPSGGPKGVGDAVNQSVVITFLLLFVVNFVITL 251

Query: 367 FYFAI 371
            Y  +
Sbjct: 252 IYLQL 256


>gi|326333296|ref|ZP_08199543.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325948940|gb|EGD41033.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 284

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           N         G   +         +         + Q +++        +L++     VI
Sbjct: 32  NALFKALASFGDFYAFVVSVFRKGFTHSFQFREFVSQAWFITTVSFWPALLVAIPFCVVI 91

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q    L + GA   +    ++  +REIG +++ +++AG   +AI A++GS KI EEID
Sbjct: 92  IFQVNQLLIEIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGATAICADLGSRKIREEID 151

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+ T+G+D +  L+ PR+ A  +    L  L     ++G              ++ +   
Sbjct: 152 AMTTLGIDPIHRLVVPRVAASTLVGIALNGLVTVVGLVGGYFFSVVLQGATPGLYLNDLT 211

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L++      KA       G+ A   G         +G+ V   VV +  ++   +S
Sbjct: 212 LLVGLSDFIAAEAKAAIFGLLAGLTACYLGLNAKGGPKGVGEAVNQTVVFAFMLLFAANS 271

Query: 363 LFAIFYFA 370
           + +  +  
Sbjct: 272 VISTLFLQ 279


>gi|326382982|ref|ZP_08204671.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198118|gb|EGD55303.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 286

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 105/251 (41%), Gaps = 7/251 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173
           +K ++ +  Q       ++   +        +  +  L    +  G   V      V++L
Sbjct: 23  LKLLDGAGEQMSFYARTLAWIPKTLVHYT--REVMRLLAEVAFGSGGLAVIGGTVGVMVL 80

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S  TG V+  QG   L Q G++  +  L + +  RE+  L+  + ++   G    A++G
Sbjct: 81  MSGFTGVVVGMQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQLG 140

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I+EEIDA+  M +  +  L+S R+ A  I++  L +L   +A + + +V   +    
Sbjct: 141 AMRISEEIDALEVMAVPSIPFLVSSRVIAGFIAVIPLYVLGLMAAYLASRVVNTVFNGQS 200

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+      ++     K    A  I ++    G+        +G  V   V  +
Sbjct: 201 TGSYDHYFNLFLPPVDVLWSFGKVLIFAFVIILIHCYYGYFASGGPAGVGVAVGHAVRTA 260

Query: 354 ISIVIIIDSLF 364
           + ++ ++D   
Sbjct: 261 LVLIAVMDFFL 271


>gi|294086102|ref|YP_003552862.1| hypothetical protein SAR116_2535 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665677|gb|ADE40778.1| Protein of unknown function DUF140 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 266

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 2/258 (0%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
              IG  ++ F+  S   + I    I             +  L  ++  +   G+  +PV
Sbjct: 11  LTRIGMPVLNFVAFSGFISQIFATAILLLCSGFRRGQPVR--LRHVVSDIRSSGIDALPV 68

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           VIL++   G +++ QG   L  FGAE      +++   RE   L+T +++AGRSGS + +
Sbjct: 69  VILMAATIGIMLSIQGVHSLRIFGAESQVTFGLALSIPREFAPLITGIIVAGRSGSQLTS 128

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
            +GSM++N E+DA++ MG+  +R +++P + AL+ +LP+L  +AN SA   AS+ I    
Sbjct: 129 RVGSMQLNGELDALKVMGISPIRFVVAPALVALLFALPILVAIANVSAFWTASLYIDAVL 188

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            I  A +++   +  T+ ++  G  KA   A  I ++ + +G  V   ++ LG   T+ V
Sbjct: 189 GIAPAAYWADILAVVTITDLIHGFGKAIIFAVLIALIGICKGLRVSGGADRLGAATTSSV 248

Query: 351 VQSISIVIIIDSLFAIFY 368
           V  I+ +I  D++FA+  
Sbjct: 249 VSCIAAIIAADAMFALIL 266


>gi|168699832|ref|ZP_02732109.1| probable permease of ABC transporter [Gemmata obscuriglobus UQM
           2246]
          Length = 276

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 115/236 (48%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
            G          A  +         +R    VG + V VV +     G V+A Q   Q  
Sbjct: 24  FGDWWLFAFRSLAGIFGRAFRAGEFLRVAVEVGTNSVGVVAITGTFIGMVLAVQAYGQFH 83

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
             G E     ++ I  +RE+G +L AVM+AGR GSA+ AE+ +M++ E++DA+  +G+D 
Sbjct: 84  TIGMETSLGAVIHISVVRELGPVLAAVMLAGRVGSAMAAELATMRVTEQLDALACLGVDP 143

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A  + LPLLT+LA+   + G+S++    Y I    ++        L ++ 
Sbjct: 144 VKYLVGPRLLACFLLLPLLTVLADVMGLFGSSLICLHVYHIDSHHYWRHTREFVKLWDVS 203

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            GL+KA      + ++A   GF     +  +G+  T   V +   ++IID L A+ 
Sbjct: 204 VGLMKAFVFGAVLSLIACHRGFNSKAGAAGVGRAATEAFVIAFVAILIIDFLLAML 259


>gi|302525560|ref|ZP_07277902.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302434455|gb|EFL06271.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 267

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 116/245 (47%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +    +G + + + E   + +K        I+Q ++     +    L++   GAVIA Q 
Sbjct: 17  AALTQVGRLATLSWEVLRAIFKRPFQFREWIQQCWFFASVTILPTALVAIPFGAVIALQL 76

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+    ++  +++   L+TA+++AG  GSA+ A+IG+ KI EEIDA+  
Sbjct: 77  GSLTTQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 136

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G++ ++ ++ PR+ A I+   LL  L +   ++G               + + F++ A 
Sbjct: 137 LGVNPIQRIVVPRVLAAIVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 196

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +++   IKA       G+VA   G         +G  V   VV +  ++ +I+ +   
Sbjct: 197 VPDLWISEIKAFLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 256

Query: 367 FYFAI 371
            Y  +
Sbjct: 257 VYLKV 261


>gi|325003316|ref|ZP_08124428.1| putative ABC-transporter integral membrane protein [Pseudonocardia
           sp. P1]
          Length = 259

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 105/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G  I    E    S +    L  LI Q ++V         L +   GA IA 
Sbjct: 7   VTRVLSPVGKFIGLGAEIGKQSLRRPFQLRELIEQTWFVTKVSALPTALFTIPFGATIAL 66

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  QFGA+  +     +  +++   ++TA++I+G  GSA+ A++G+  I EEI A+
Sbjct: 67  LLGELTRQFGAQSQTGAGAVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAM 126

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+  ++ L+ PR+ A+ I+  +L  LA    + G               + S F + 
Sbjct: 127 EVLGISPIQRLVVPRVLAMGITAVVLNGLATCVGVSGGYFFNVIIQGGSPGAYISSFSAI 186

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A +++I    IKA       G+VA   G      +  +G  V   VV S  +V +I+ + 
Sbjct: 187 AQVSDIVVSEIKAFLFGIVAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLVL 246

Query: 365 AIFYFAI 371
              Y  +
Sbjct: 247 TALYLEL 253


>gi|300782534|ref|YP_003762825.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|41581798|gb|AAS07742.1| putative ABC-transporter permease [Amycolatopsis mediterranei S699]
 gi|299792048|gb|ADJ42423.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 278

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG------- 167
           +   + +N        LG  +S  G     + +  + +   ++R +  V           
Sbjct: 5   QGAKRVVNRPLQTLDTLGDQMSFYGRALLWTPRTLRRYTKEVLRLLAEVSFGSGSLAVIG 64

Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V++ ++  TG ++  QG   L+  G   F+  L +    REI  L+  + ++   G
Sbjct: 65  GTVGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVG 124

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+I+EEIDA+  MG+  +  L++ RI A  +++  L I+   S+ + + +V
Sbjct: 125 AGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYIIGLLSSYLASRLV 184

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           +   Y      +   F       ++    IK    +  I +     G+        +G  
Sbjct: 185 VIYIYHQSAGTYDHYFDLFLPPQDVLYSFIKVLLFSVLIILSHCYFGYRATGGPAGVGVA 244

Query: 346 VTTCVVQSISIVIIIDSLF 364
           V   V  SI  V I++   
Sbjct: 245 VGKAVRLSIVTVSIMNFFI 263


>gi|282897686|ref|ZP_06305685.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9]
 gi|281197365|gb|EFA72262.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9]
          Length = 241

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 108/239 (45%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
                G+      + K +   ++     VG   +  V+L+S   G +   Q A +L +FG
Sbjct: 3   TALLFGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELVRFG 62

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A        ++   RE+  LLTA +IAG++GSA  AEIG+M++ E+IDA+  +  D +  
Sbjct: 63  AVDNLGGAFAVAFCRELAPLLTASVIAGQAGSAFAAEIGAMQVTEQIDALYLLKTDPIDY 122

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  + +P++ I A    + G      ++Y I    F        T  ++   +
Sbjct: 123 LVLPRVIACGLMMPVMMIFALIIGVSGGIFAGLEFYQIQPENFLESVRDFLTPGDMMMII 182

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           IK       + +     G      +  +G+  TT VV +  ++ I D L A+    +GI
Sbjct: 183 IKGVIFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLALPGITVGI 241


>gi|145352678|ref|XP_001420665.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus
           lucimarinus CCE9901]
 gi|144580900|gb|ABO98958.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus
           lucimarinus CCE9901]
          Length = 308

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 110/239 (46%), Gaps = 2/239 (0%)

Query: 134 LVISNTGEFCASSYK--FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
                 G       +   +      ++Q+  VG   + V +L S   G V   Q   + +
Sbjct: 69  ATGLLFGSVLYRCARQPRRVNWEQTLQQIARVGPQTLGVSLLTSSFVGMVFTIQFCKEFA 128

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + G +     L+ +   RE+  ++ A+++ GR GS+I AE+G+M++ E++D +  +G D 
Sbjct: 129 KVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTEQVDQLTVLGTDP 188

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  +SLP+L+I++   A+  + ++    Y +   V           ++I 
Sbjct: 189 VDYLVIPRVIACAVSLPILSIISFAQALGASILLADLRYGVSPNVIIDSAAKYLEPSDIG 248

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               K+      I +++   G      +  +G+  T  VV S++ + ++D + ++ +F 
Sbjct: 249 IMTAKSIAFGAVIAVISCGWGTTTTGGAKGVGESTTASVVISLTAIFVVDFVLSLVFFQ 307


>gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
 gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99]
          Length = 279

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 1/255 (0%)

Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +G+   + I      A  +G     + +   ++++        + Q + V    +   +
Sbjct: 19  RLGRGT-ELIQQLAVPARAVGGFFEMSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTL 77

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L+S     ++A      L + GA   S    +   + ++G ++T +++AG   +AI A++
Sbjct: 78  LVSIPFTVLVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADL 137

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+  I EEIDA+R +G+D ++ L+ PR+ A  +   LL  L     + G          +
Sbjct: 138 GARTIREEIDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGV 197

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               F +       L  +    IKA       G+V    G  V      +G  V   VV 
Sbjct: 198 NPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVY 257

Query: 353 SISIVIIIDSLFAIF 367
           +   + +I+ +    
Sbjct: 258 AFICLFVINVVMTAI 272


>gi|319950491|ref|ZP_08024404.1| putative YrbE family protein [Dietzia cinnamea P4]
 gi|319435850|gb|EFV91057.1| putative YrbE family protein [Dietzia cinnamea P4]
          Length = 262

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 106/252 (42%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +     G V     +     ++        I Q +++    +    L++   G
Sbjct: 5   DVGGGFRTAVGGAGEVFRLFLDVLRGVFRRPFQFREFIEQSWFIASVTILPSALVAIPFG 64

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
           AV+A Q    + Q GAE F+     +  +++   L+T+++IAG +GSA+ A++G+  I E
Sbjct: 65  AVVAMQTGSLVQQLGAEAFTGATGVLAVVQQGAPLVTSLLIAGAAGSAVAADLGARTIRE 124

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+R +G+D ++ L+ PR+  +++   LL  L +   I G  +            +  
Sbjct: 125 ELDAMRVLGIDPIQRLVVPRVLGMMLVAVLLNGLVSIVGISGGYVFNIMLQGGTPGAYLM 184

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F + A L +     IKA       G+VA   G         +G  V   VV +  ++  
Sbjct: 185 SFGALAQLPDFIMSSIKALIFGLIAGVVASYCGMNPKGGPKGVGDAVNLGVVLTFLLLFF 244

Query: 360 IDSLFAIFYFAI 371
            + +    Y  I
Sbjct: 245 ANLILTAMYLQI 256


>gi|302523959|ref|ZP_07276301.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302432854|gb|EFL04670.1| ABC transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 278

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 7/251 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173
           ++ ++    Q    G  +  T          K  L  L    +  G   V      V++ 
Sbjct: 15  LETLDTLGDQMSFYGRALLWTPRTLRRYT--KEVLRLLAEVSFGSGSLAVIGGTVGVMVG 72

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TG ++  QG   L+  G   F+  L +    REI  L+  + ++   G+   A++G
Sbjct: 73  LTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVGAGFTAQLG 132

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I+EEIDA+  MG+  +  L++ RI A  +++  L ++   S+ + + +V+   Y   
Sbjct: 133 AMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYVIGLLSSYLASRLVVIYIYGQS 192

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F       ++    IK    +  I +     G+        +G  V   V  S
Sbjct: 193 AGTYDHYFDLFLPPQDVLYSFIKVLIFSVLIILSHCYFGYRASGGPAGVGVAVGRAVRLS 252

Query: 354 ISIVIIIDSLF 364
           I  V +++   
Sbjct: 253 IVTVSVVNFFI 263


>gi|282900961|ref|ZP_06308894.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194052|gb|EFA69016.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 259

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 104/232 (44%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
                G+      + K +   ++     VG   +  V+L+S   G +   Q A +L +FG
Sbjct: 21  TALLFGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELIRFG 80

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A        ++   RE+  +LTA +IAG+ GSA  AEIG+M++ E+IDA+  +  D +  
Sbjct: 81  AVDNLGGAFAVAFCRELAPILTASVIAGQVGSAFAAEIGAMQVTEQIDALYLLKTDPIDY 140

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  + +P++ I A    + G      ++Y +    F        T  ++   +
Sbjct: 141 LVLPRVIACGLMMPVMMIFALIMGVSGGIFAGLQFYQVQPENFLESVRDFLTPGDMMMII 200

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           +K       + +     G      +  +G+  TT VV +  ++ I D L A+
Sbjct: 201 VKGVIFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLAL 252


>gi|324999480|ref|ZP_08120592.1| hypothetical protein PseP1_11966 [Pseudonocardia sp. P1]
          Length = 246

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 97/242 (40%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   +   +   + +K        ++Q ++V    +   IL+     A++  Q    L 
Sbjct: 1   MGSFFAFVADTFVAMFKRPFHWREFVQQTWFVASVSLGPAILLGIPFVALVTFQFNLILV 60

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S        + +IG + T  +IAG S +AI A+IG+ KI EE+DA+  +G+D 
Sbjct: 61  EIGAIDLSGSGSGFATVTQIGPVATTFIIAGASSTAICADIGARKIREELDAMEVLGIDV 120

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V  L+ PR+ A  ++  LL  +     + G  +            +           ++ 
Sbjct: 121 VHRLVVPRVLATAVNAFLLNGVMILIGLTGGYVFGVYLQGASPGQYVDSLKLLVGFPDLV 180

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            G I+A        ++    G         +G  V   VV +   +  I+ L     +++
Sbjct: 181 HGEIRAVVFGMVGALIGCYRGMTCAAGPRGVGNAVNETVVYTFLALFPINILLTQIPYSL 240

Query: 372 GI 373
           GI
Sbjct: 241 GI 242


>gi|311744834|ref|ZP_07718630.1| ABC superfamily ATP binding cassette transporter permease protein
           [Aeromicrobium marinum DSM 15272]
 gi|311311951|gb|EFQ81872.1| ABC superfamily ATP binding cassette transporter permease protein
           [Aeromicrobium marinum DSM 15272]
          Length = 258

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 117/250 (46%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           ++   + A   G + +   +   + +K    +   + Q Y+     +    L++   GAV
Sbjct: 3   VSQIAAPARAAGGLFAFMLDVFMALFKRPFQMREFLLQAYFTIRVTIVPTALVAIPFGAV 62

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           IA Q    + QFGA+ F+     +  +R  G + TA++IAG +GSAI A+ G+ KI EE+
Sbjct: 63  IALQVGGLIKQFGAQSFTGSAAVLAVVRNAGPIATALLIAGAAGSAIAADFGARKIREEL 122

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  +G+D ++ L+ PR+ A+++    L  L  F  + G  +      D     + + F
Sbjct: 123 DAMMVLGIDPIQRLVVPRVLAVMLIAVFLNGLVTFVGVAGGYVFNVLLQDGTPGAYLASF 182

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            + A L +I  G++KA        IVA  +G         +G  V   VV +  ++  ++
Sbjct: 183 TALAQLPDILQGMVKAVIFGFLAAIVASYKGMNAKGGPKGVGDAVNEAVVITFVLLFAVN 242

Query: 362 SLFAIFYFAI 371
            + +  Y  +
Sbjct: 243 FVVSALYIQL 252


>gi|254488593|ref|ZP_05101798.1| membrane protein [Roseobacter sp. GAI101]
 gi|214045462|gb|EEB86100.1| membrane protein [Roseobacter sp. GAI101]
          Length = 254

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 109/254 (42%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + +    +G V           ++   +       +  +G   +PVV L +  
Sbjct: 1   MAALGRLTLAALATIGSVTLFACSALVHIFRPPFYAGQFGTALVQIGWLSLPVVGLTALF 60

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +  Q     ++F AE     +++I  +RE+G +L  +M+A R  +AI AEI +MK+
Sbjct: 61  TGGALVMQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMVAARVTAAIAAEIATMKV 120

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++DA+ T+  D +R L  PR+ A ++++PLL  + +   I+G   V           +
Sbjct: 121 TEQLDALITLSTDPMRYLTVPRVLAALLAVPLLVAVGDIIGIMGGYFVATGSLGFSSGAY 180

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                +     +I + LIK         ++    G   G  +  +G+   + V  +  ++
Sbjct: 181 LRNTVNFLEPLDIASSLIKGTAFGLIAALMGCYFGLNAGRGARGVGRATKSAVEAAAILI 240

Query: 358 IIIDSLFAIFYFAI 371
           +  + +     FA+
Sbjct: 241 LAANFILTAVIFAL 254


>gi|289806792|ref|ZP_06537421.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 212

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 1/211 (0%)

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y VGV  + ++I+     G V+  QG   L+ + AE     L+++  LRE+G ++ A++ 
Sbjct: 1   YNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLF 60

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISPR WA +ISLPLLTI+     I 
Sbjct: 61  AGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIW 120

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           G S+V   +  I    F+S   +      ++   LIK+   A  +  +A+  G+     S
Sbjct: 121 GGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTS 180

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             + +  T  VV +   V+ +D +     F 
Sbjct: 181 AGISRATTRTVVHASLAVLGLDFVLTALMFG 211


>gi|319950492|ref|ZP_08024405.1| putative YrbE family protein [Dietzia cinnamea P4]
 gi|319435851|gb|EFV91058.1| putative YrbE family protein [Dietzia cinnamea P4]
          Length = 285

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 7/253 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPV 170
           +  V   +    Q       I    +           L  +    + VG        + V
Sbjct: 19  RGPVNSFDSLGDQLAFHLRAIRWIPQTIVHYRH--EVLRLIAEVTFGVGTLAVLGGTIGV 76

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++++S  TG V+  QG   L Q G+ + +  L + +  RE+  ++ ++ ++   G    A
Sbjct: 77  IVMMSGFTGVVVGLQGYAALDQIGSSVLTGFLSAYVNTREVAPVVASLALSATVGCGFTA 136

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EEIDA+  M +  V  L++ R+ A  I++  L ++   S+ +    V     
Sbjct: 137 QLGAMRISEEIDALEVMAIPSVPYLVTTRVIAGFIAVIPLYVVGLLSSYLATRGVNTMIQ 196

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 F   FH      ++    IK    A  + ++    G+        +G  V   V
Sbjct: 197 GQSTGSFDHYFHLFLPPEDVIYSFIKVIIFAFVLVMIHCYYGYTASGGPAGVGVAVGRAV 256

Query: 351 VQSISIVIIIDSL 363
             +I +V I++  
Sbjct: 257 RTTIVVVAILNFF 269


>gi|119714949|ref|YP_921914.1| hypothetical protein Noca_0702 [Nocardioides sp. JS614]
 gi|119535610|gb|ABL80227.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 275

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 107/251 (42%), Gaps = 10/251 (3%)

Query: 126 CSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VPVVILIS 175
                 LG  ++   +  A + +  + +   ++R +  V +           V V++ ++
Sbjct: 12  LKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMT 71

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
           F TGA +   G   L Q G   F+  + +    REI  L++ + +A   G    A++GSM
Sbjct: 72  FFTGAQVGLSGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCGFTAQLGSM 131

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I+EE+DA+  M +  +  L++ RI   +I++  L ++   ++     + + +++     
Sbjct: 132 RISEEVDALEVMAIPSLPFLVTTRIVGGLIAIIPLYVVGLLASYFATRLTVTQFFGQSAG 191

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +   F+S     ++     K    A  + ++    G+        +G  V   V  SI 
Sbjct: 192 TYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGVAVGRAVRTSIV 251

Query: 356 IVIIIDSLFAI 366
            + +ID   ++
Sbjct: 252 AINVIDLFLSM 262


>gi|331699196|ref|YP_004335435.1| hypothetical protein Psed_5449 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953885|gb|AEA27582.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 259

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 106/247 (42%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  +G + +   +    +++    L   I Q ++V         L +   GA IA 
Sbjct: 7   VTRALTPVGQLFALGVDIVRMTFRRPFQLGEYIEQTWFVTKVSALPTALFTIPFGATIAL 66

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
             A    QFGA+  +     +  +++   ++TA++I+G  GSA+ A++G+  I EEI A+
Sbjct: 67  LLAELTRQFGAQSQTGAGSVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAM 126

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             +G+  ++ L+ PR+ A+  +  +L  LA    + G               + + F + 
Sbjct: 127 EVLGISPIQRLVVPRVLAMATTALVLNGLATVVGVAGGYFFNVVVQGGTPGAYIASFSAI 186

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           A +++I    +KA       G+VA   G      +  +G  V   VV S  +V +I+ + 
Sbjct: 187 AQVSDIVVSEVKAALFGFTAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLIL 246

Query: 365 AIFYFAI 371
              Y  I
Sbjct: 247 TALYLQI 253


>gi|296179481|gb|ADG96486.1| SupB [Gordonia cholesterolivorans]
          Length = 287

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 3/249 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFL---LSLIRQMYYVGVSGVPVVILISFVTGAV 181
              Q    G  +           +    L   +SL      V    V ++  ++   G  
Sbjct: 29  LGRQLAFYGASLRAVPRAFTHYRRETIRLLAEVSLGAGALAVIGGTVVIIGFLTAAAGYE 88

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           + QQG+  L + G E  S  + +    RE   ++  V +    GS   A++G+M+++EEI
Sbjct: 89  VGQQGSSSLGRVGVEAMSGFISAFFNTREAIPVIAGVALTATVGSGFTAQLGAMRVSEEI 148

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  M +  +  L+S RI A ++++  L  +A F+       V     D     +   F
Sbjct: 149 DALEVMSVQSLPYLVSTRIAAGLVAIIPLYAIALFTGYAATKFVSVFLSDQSPGTYDHYF 208

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                 +++   L+K   MA A+  V    G+        +G  V   V  S+ I++++D
Sbjct: 209 QLFLQPSDVAISLLKVIVMAVAVMAVHCYYGYNASGGPAGVGVAVGHAVRTSLIIIMVVD 268

Query: 362 SLFAIFYFA 370
            +  I  + 
Sbjct: 269 FVVGIALYG 277


>gi|300783703|ref|YP_003763994.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299793217|gb|ADJ43592.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 264

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 100/228 (43%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +     G +     +    +++       LI+Q +++    +    L+S   GAVIA   
Sbjct: 14  AALRQTGRLYGLGLDVVRLTFRRPFQARELIQQFWFIASVSILPTALVSIPFGAVIALHI 73

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+     +  +++   ++TA++IAG  GSA+ A++GS  I EEIDA+  
Sbjct: 74  GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 133

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  V+ LI PR+ A +     L  + +   ++G               + + F + A 
Sbjct: 134 LGVSPVQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQHGTPGAYLASFSALAQ 193

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           L +++   IKA       G+VA   G         +G  V   VV + 
Sbjct: 194 LPDLWISEIKALIFGFVAGVVASYRGLNPKGGPKGVGDAVNQSVVITF 241


>gi|262196626|ref|YP_003267835.1| hypothetical protein Hoch_3440 [Haliangium ochraceum DSM 14365]
 gi|262079973|gb|ACY15942.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365]
          Length = 268

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 3/225 (1%)

Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSIL 206
           +       + RQMY +G      + +     G V   QGA QL +  G         S L
Sbjct: 41  RRGWRRREVARQMYDIGNRSFVFIAVTMGFFGMVFIYQGALQLDRIVGDVSLLGREFSKL 100

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
            ++++G  LTA+M+A R G+ I AE+GSM + E++DA+R  G+  +  L++PR+ A ++ 
Sbjct: 101 LVKDLGPSLTAMMLATRVGAGIAAELGSMTVTEQVDALRMSGVRPIDYLVAPRLLAALVM 160

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +  L I     A     +  W Y+D+    +F          ++  GL+KA   A  I +
Sbjct: 161 VTALAIFGTAVAFAAGGLTAWAYFDLNPRAYFDLSQ--VEFGHLGLGLVKAVVYAANIPL 218

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           +A   G      S  +G+  T  V+ S   V+  D   ++    +
Sbjct: 219 IAAFCGLRAHGGSAGVGRATTAAVIGSSFAVLSWDLALSLVALQL 263


>gi|228473179|ref|ZP_04057934.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275329|gb|EEK14121.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 245

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 2/229 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G       E      K+      +++++  +    + ++  IS   GAVIA Q A 
Sbjct: 4   LEAIGRYFLMLYEIFRKRTKWAMMKRLIMKEIDDLMYGSLGIIAFISLFVGAVIAIQMAL 63

Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            +      +           + E     T++++AG+ GS I + IG+M++ E+IDA+  M
Sbjct: 64  NIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMRVTEQIDALDIM 123

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++ +  LI P+I AL++  P    +A    I G  I     +    A F          
Sbjct: 124 GVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAEFLEGLKLQFRA 182

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
            +I   LIK+   A  +  +    G+ +   +  +GK  T   V +   
Sbjct: 183 FDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTISFVWTSVA 231


>gi|54027082|ref|YP_121324.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018590|dbj|BAD59960.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 288

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 101/256 (39%), Gaps = 7/256 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPV 170
           +  +  ++ +  Q       I+            K  +  L    +  G        + V
Sbjct: 22  RAPLNVVDRAGEQMSFYARAIAWIPRAAVHYR--KEVMRLLAEVTFGSGALAVIGGTIGV 79

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++ +S   G V+  QG   L   G+ + +  L + +  REI  L+ A+ ++   G    A
Sbjct: 80  IVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAPLVAALALSATVGCGFTA 139

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EEIDA+  M +  V  L++ R+ A  +++  L I+    A   +  +   + 
Sbjct: 140 QLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLYIVGLLGAYFASRSISIWFN 199

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   F       ++    +K    A  I +V    GF        +G  V   V
Sbjct: 200 GQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYYGFTATGGPAGVGVAVGRAV 259

Query: 351 VQSISIVIIIDSLFAI 366
             +I +V ++D   ++
Sbjct: 260 RAAIVLVNVLDFFLSL 275


>gi|302525041|ref|ZP_07277383.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
 gi|302433936|gb|EFL05752.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4]
          Length = 257

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 109/245 (44%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +  H  G + +   +    +++       L++Q +++    +    L+S   GAVIA   
Sbjct: 7   AALHQTGRLYALGLDVVRLTFRRPFQFRELVQQFWFIASVSILPTALVSIPFGAVIALHI 66

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+     +  +++   ++TA++IAG  GSA+ A++GS  I EEIDA+  
Sbjct: 67  GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 126

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  ++ LI PR+ A +     L  + +   ++G               + + F + A 
Sbjct: 127 LGVSPIQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQGGTPGAYLASFSALAQ 186

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           L +++   IKA        +VA   G         +G  V   VV +  ++ +++ +   
Sbjct: 187 LPDLWISEIKALLFGFVAAVVASYRGLNPRGGPKGVGDAVNQSVVITFLLLFVLNLILTT 246

Query: 367 FYFAI 371
            Y  +
Sbjct: 247 VYLQL 251


>gi|238758308|ref|ZP_04619486.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236]
 gi|238703431|gb|EEP95970.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236]
          Length = 208

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + ++++     G V+  QG   L+ + AE     ++S+  LRE+G ++TA++ AGR+G
Sbjct: 2   QSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAG 61

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG MK  E+I ++  M +D +R +++PR WA +IS+PLLT +     I G S+V
Sbjct: 62  SALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVV 121

Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
              +  I    F+S   +      ++   LIK+   A  +  +A+  G+     S  + +
Sbjct: 122 GVDWKGIDAGFFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISR 181

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV S   V+ +D +     F 
Sbjct: 182 ATTRTVVHSSLAVLGLDFVLTALMFG 207


>gi|258546129|ref|ZP_05706363.1| membrane protein [Cardiobacterium hominis ATCC 15826]
 gi|258518554|gb|EEV87413.1| membrane protein [Cardiobacterium hominis ATCC 15826]
          Length = 263

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 2/255 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +      + +    LG                    L  +R  Y  GV  +P++++    
Sbjct: 8   LAAVGATTLACLAALGDFCLFALALLRHVAILLRKPLLTLRATYAAGVLSLPIILVAGLF 67

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V++ Q    + +FGAE     ++++  LRE+G +++A++ AGR+GSAI AEIG MK 
Sbjct: 68  VGMVLSFQAYTTMVRFGAEQALGTMVALSLLRELGPVVSALLFAGRAGSAITAEIGLMKT 127

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            E++ A+  M ++ V  +  PR      +LPLLTIL    AIIGA +V   Y  +   +F
Sbjct: 128 TEQLVAMEMMAIEPVAQVGVPRFLGAWFALPLLTILFVAVAIIGAHLVGVVYLGLDDGIF 187

Query: 298 FSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           +S   ++    +++  G L+K+         +A+ +GF+    ++ + +  TT VV S  
Sbjct: 188 WSGMQNSVDFGSDVVRGMLLKSLVFGWVCAAIAVFQGFSSLPTASGMSRATTTTVVMSSL 247

Query: 356 IVIIIDSLFAIFYFA 370
            V+ ++ +     F 
Sbjct: 248 AVLGLNFVLTAMLFG 262


>gi|226349636|ref|YP_002776750.1| putative YrbE family protein [Rhodococcus opacus B4]
 gi|226245551|dbj|BAH55898.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 304

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG--------- 167
            +K I+   S    +G   S      A+  + F+ +    +R +  V +           
Sbjct: 32  ALKVIDAPVSHLEEMGRQFSFYNHTIAAIPRTFRRYRAETVRLLAEVSMGTGALAVIGGT 91

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V+ L++   G  + QQGA  L + G    S  + +    RE    +  + +    G+ 
Sbjct: 92  LMVISLLTAAVGYEVGQQGATSLGRVGIGALSGFISAFFNTREAIPAIAGIALTATVGAG 151

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+++EEIDA+ TM +  +  L++ R+ A +I++  L  +A F       +V  
Sbjct: 152 FTAQLGAMRVSEEIDAMETMSIPSLPYLVTTRVMAGVIAVIPLYSVALFVGYAATQLVTV 211

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                    F+  F+     +++    +K   M+  +  V    G+        +G  V 
Sbjct: 212 YMIGEAKGTFWHYFNVFLVPSDVIWSAVKVLAMSVVVMCVHCYHGYNASGGPAGVGVAVG 271

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  S+  +++ID L  I
Sbjct: 272 RAVRTSLISIMVIDLLIGI 290


>gi|229494293|ref|ZP_04388056.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|229318655|gb|EEN84513.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 281

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 9/261 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           + V  ++    Q      VI++        ++    +  L+ Q+ +       G   V V
Sbjct: 15  RTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGGSVVV 71

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +  ISF  G+ I  +G   L+  G    S  + +I   RE+  L+ A+ +A + G+   A
Sbjct: 72  IFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGTGFTA 131

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EEIDA+  M +  +R L++ R+ A +I++  L ++  F++ +  ++ + +  
Sbjct: 132 QLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAVIRVK 191

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   F    +  +I+  LIK    A  + +V    G+        +G+     +
Sbjct: 192 GQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAAGRAL 251

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
             SI  +   D    I  + +
Sbjct: 252 RTSIVFLAFTDVAMTIALWGL 272


>gi|226304167|ref|YP_002764125.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183282|dbj|BAH31386.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 281

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 9/261 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170
           + V  ++    Q      VI++        ++    +  L+ Q+ +       G   V V
Sbjct: 15  RTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGGSVVV 71

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           +  ISF  G+ I  +G   L+  G    S  + +I   RE+  L+ A+ +A + G+   A
Sbjct: 72  IFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGTGFTA 131

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I+EEIDA+  M +  +R L++ R+ A +I++  L ++  F++ +  ++ + +  
Sbjct: 132 QLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAVIRVK 191

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   F    +  +I+  LIK    A  + +V    G+        +G+     +
Sbjct: 192 GQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAAGRAL 251

Query: 351 VQSISIVIIIDSLFAIFYFAI 371
             SI  +   D    I  + +
Sbjct: 252 RTSIVFLAFTDVAMTIALWGL 272


>gi|134103292|ref|YP_001108953.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915915|emb|CAM06028.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 269

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 108/256 (42%), Gaps = 7/256 (2%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PV 170
           ++ ++F++D   Q       ++   +        K  +  L    +  G   V      V
Sbjct: 3   RRPLEFLDDLGDQMSFYLRTLAWIPKAVTRYV--KETMRLLAEVSFGSGALAVIGGTVGV 60

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           ++ ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   GS   A
Sbjct: 61  MVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTA 120

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I++EIDA+ TMG+  +  L++ R+ A  +++  L +L   ++ + A +V    Y
Sbjct: 121 QLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVY 180

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                 +   F+      ++     K    +  + +     G+        +G  V   V
Sbjct: 181 GQSAGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAV 240

Query: 351 VQSISIVIIIDSLFAI 366
             +I    ++D   ++
Sbjct: 241 RTAIVTTALLDFFLSL 256


>gi|323436128|ref|ZP_01050723.2| ABC transporter, permease protein [Dokdonia donghaensis MED134]
 gi|321496443|gb|EAQ38641.2| ABC transporter, permease protein [Dokdonia donghaensis MED134]
          Length = 233

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 2/234 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAE 196
              +      K K     + +++  + +  + +V  ISF  G V+A Q A  L+     +
Sbjct: 1   MIKDTFVKPTKGKVLSDLIFKEIDDLIIGSLGIVAFISFFVGGVVAIQTALNLNNPLIPK 60

Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
                      + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  LI
Sbjct: 61  SLIGFAARQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGINSLNYLI 120

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            P+I A+++  P +  +A F  IIGA              F S          +F    K
Sbjct: 121 FPKIVAMLV-YPFVIAIAMFLGIIGAYTAAVYGGFTSNDAFLSGLQEDFIPFQLFYAFFK 179

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               A  +  +    G+ +   +  +GK  TT  V +   +I+++ +      +
Sbjct: 180 TFLFAFLLATIPSYHGYFMRGGALEVGKASTTSFVWTSVAIILVNFIVTQLLLS 233


>gi|256380616|ref|YP_003104276.1| hypothetical protein Amir_6633 [Actinosynnema mirum DSM 43827]
 gi|255924919|gb|ACU40430.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827]
          Length = 279

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 104/266 (39%), Gaps = 10/266 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG-- 167
               G++  +  +        LG  +       A + +    +   ++R +  V      
Sbjct: 1   MATTGERARRAASAPLRGLDSLGDQLWFYLRALAWAPRAITRYHREVLRLLAEVSFGSGA 60

Query: 168 -------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
                  + V++ +S  TG V+  QG   L Q G   F+  + +    REI  L+  + +
Sbjct: 61  LAVIGGTIGVMVGLSVFTGTVVGLQGFTALDQIGTSAFAGFVSAYFNTREIAPLVAGLAL 120

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           +   GS   A++G+M+I+EEIDA+  MG+  +  L++ RI A   ++  L ++   ++ +
Sbjct: 121 SATVGSGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIVAGFAAIVPLYVIGLLTSYL 180

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            A  V   +Y      +   F       ++     K    A  I +     G+       
Sbjct: 181 AARTVTVHFYGQSAGTYDHYFTLFLPPEDVLWSFGKVLVFAVVIILTHCYYGYRASGGPA 240

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366
            +G  V   V  +I    ++D   ++
Sbjct: 241 GVGVAVGRAVRTAIVTTSLLDFFLSL 266


>gi|134098921|ref|YP_001104582.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291009385|ref|ZP_06567358.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133911544|emb|CAM01657.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 279

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 102/259 (39%), Gaps = 1/259 (0%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           + +    G  +    +      + LG        +     +    +      +  +G   
Sbjct: 9   RTVLRRPGDTLYNLGDQLLFYLYALGAAPLAVRRYLREVVRLLAEVTFGSGALAVIG-GT 67

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + V++ +   TG  +  QG   L+Q G    +  + +    REI  L+  + ++   G+ 
Sbjct: 68  IGVILGMCVFTGVTVGLQGFSALNQIGISTLTGFMTAYFNTREIAPLVAGLALSATVGAG 127

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I+EEIDA+  M +  +  L++ RI A  +++  L ++   ++ + +  V  
Sbjct: 128 FTAQLGAMRISEEIDALEVMAVRSLPYLVTTRIVAGFVAVVPLYVIGLLTSYVASRQVTV 187

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            ++      +   F       ++     K    + A+ +     G+        +G  V 
Sbjct: 188 WFFGQSGGTYDHYFSLFLPPVDVLWSFGKVLVFSVAVILTHCFYGYRAAGGPAGVGVAVG 247

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  SI ++ ++D   ++
Sbjct: 248 RAVRTSIVLISVLDLFLSL 266


>gi|126662313|ref|ZP_01733312.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38]
 gi|126625692|gb|EAZ96381.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38]
          Length = 233

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 100/234 (42%), Gaps = 2/234 (0%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
              E      K+      +++++  + +  + +V  ISF  G V+A Q A  L+      
Sbjct: 1   MLKEIFNKPTKWSVMKQLILKEVDDLIIGSLGIVSFISFFVGGVVAIQTALNLTNPLIPK 60

Query: 198 F-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256
           F          + E      ++++AG+ GS I + IG+M++ E+IDA+  MG++ +  L+
Sbjct: 61  FLIGFATRQSVILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDALEVMGVNSLNYLV 120

Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            P+I AL++  P +  L+ F  + G  +            F +   +     +I    IK
Sbjct: 121 FPKIIALLL-YPFVIGLSMFLGVFGGWMAAVYGGFTTSFEFTTGLQTEFIPFHIAYAFIK 179

Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
               A  +  +    G+ +   +  +G+  T   V +  ++I+++ +      +
Sbjct: 180 TIVFALLLATIPSFHGYYMKGGALEVGQASTVSFVWTSVVIILMNFILTQLLLS 233


>gi|300782533|ref|YP_003762824.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|41581797|gb|AAS07741.1| putative ABC-transporter integral membrane protein [Amycolatopsis
           mediterranei S699]
 gi|299792047|gb|ADJ42422.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 250

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 109/244 (44%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
                G + +   +     ++    L   I+Q +++    +    L++   GAVI+ Q  
Sbjct: 1   MLRETGNLFALGLDIVRGLFQRPFQLREFIQQSWFIASVTILPTALVAIPFGAVISLQFG 60

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
               Q GA+ ++     +  +++   L+TA+++AG  GSA+ A+IG+  I EEI A+  +
Sbjct: 61  SLARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIAAMEVL 120

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+  V+ LI PR  A+++   LL  + +   ++G               + + F + A L
Sbjct: 121 GVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLASFSALAQL 180

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +++ G +KA        +VA   G         +G  V   VV +  ++ +++ +  + 
Sbjct: 181 PDLWVGELKALIFGFIAAVVASYRGLNPSGGPKGVGDAVNQSVVITFLLLFVVNFVITLI 240

Query: 368 YFAI 371
           Y  I
Sbjct: 241 YLQI 244


>gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [Mycobacterium vanbaalenii PYR-1]
 gi|119954338|gb|ABM11343.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 269

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 112/239 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G + + T +   + +K        + Q ++V    +   + +S     + +     
Sbjct: 25  LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 85  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++    
Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 263


>gi|218961658|ref|YP_001741433.1| hypothetical protein; putative membrane protein [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730315|emb|CAO81227.1| hypothetical protein; putative membrane protein [Candidatus
           Cloacamonas acidaminovorans]
          Length = 253

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 3/246 (1%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                    L   ++   E     +     LL +IRQ+ + GV  +P++  I+   G + 
Sbjct: 7   KSLRDFFLFLEETVT---ELLHIKHNRHVSLLVVIRQILFTGVEALPLIGFIALAIGCLT 63

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             QG   LS FG  I+   ++  + + E+  ++TA+++  RSG+AI  E+G+M +N E+ 
Sbjct: 64  IMQGYAFLSNFGQGIWVHIILVRVVVGELSGIITALVVIARSGTAISTELGNMVVNREMQ 123

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
            +++  +  +  L+  RI  ++IS+ +LT+  N  A++G  +    +  + F  F + F 
Sbjct: 124 LLKSFDIAPMGYLVVSRILGVVISMLVLTLYFNIIAVLGGWLFAQFFNHLSFGAFMNDFL 183

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           S  T   I   ++K+      I I A  EG +V   S  + ++    VV SI  V+I+D 
Sbjct: 184 SVLTFPYILMTILKSVIFGFVIAITASYEGMSVYRASTEVPQRTIKAVVISIFSVLILDL 243

Query: 363 LFAIFY 368
           + +  +
Sbjct: 244 IISWLF 249


>gi|239945574|ref|ZP_04697511.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
 gi|239992041|ref|ZP_04712705.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379]
 gi|291449029|ref|ZP_06588419.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291351976|gb|EFE78880.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 267

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 105/253 (41%), Gaps = 3/253 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173
            ++ +++ S  Q       +           +        ++       V    + V+I 
Sbjct: 2   AMLNWLDRSGDQLTFYIRTLVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIA 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G
Sbjct: 62  MTLFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEE+DA+  MG+  +  L++ RI A ++++  L  +   S+ + +  +   +    
Sbjct: 122 AMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQS 181

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+   +  ++   ++K    +  + +     GF        +G  V   V  +
Sbjct: 182 AGTYDHYFNLFLSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241

Query: 354 ISIVIIIDSLFAI 366
           I ++ + D   ++
Sbjct: 242 IVLISVTDFFLSL 254


>gi|254392559|ref|ZP_05007737.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294816013|ref|ZP_06774656.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444355|ref|ZP_08219089.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064]
 gi|197706224|gb|EDY52036.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328612|gb|EFG10255.1| ABC-transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 267

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 103/251 (41%), Gaps = 1/251 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + + +  +        L  +      +     +    + +       V    + V++ ++
Sbjct: 5   RWLERSGDQLAFYLRALLWIPRTLHRYLREVQRLLAEV-AFGSGGLGVIGGTIGVMVAMT 63

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
             TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G+M
Sbjct: 64  LFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAM 123

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +INEE+DA+  MG+  +  L++ RI A ++++  L  +   S+ + +  +   +      
Sbjct: 124 RINEEVDALEAMGVRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVVFNGQSTG 183

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +   F    +  ++   ++K    +  + +     GF        +G  V   V  +I 
Sbjct: 184 TYDHYFQLFLSPDDVLLSILKVLIFSVMVILAHCYYGFRAEGGPAGVGVAVGRSVRNAIV 243

Query: 356 IVIIIDSLFAI 366
           ++ + D   ++
Sbjct: 244 LISVTDFFLSL 254


>gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [Mycobacterium sp. MCS]
 gi|119867717|ref|YP_937669.1| hypothetical protein Mkms_1676 [Mycobacterium sp. KMS]
 gi|126434218|ref|YP_001069909.1| hypothetical protein Mjls_1625 [Mycobacterium sp. JLS]
 gi|108769038|gb|ABG07760.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119693806|gb|ABL90879.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126234018|gb|ABN97418.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 266

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 112/239 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G + + T +   + +K        + Q ++V    +   + +S     + +     
Sbjct: 22  LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 81

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 82  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 141

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 142 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 201

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++    
Sbjct: 202 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 260


>gi|289641746|ref|ZP_06473904.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289508390|gb|EFD29331.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 290

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 1/250 (0%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
                     G +   +          + +   +  Q   + +S   ++  + F+ G   
Sbjct: 33  RGVKQAVTTGGEIAQFSARTIRDFGDIRHYASEVFHQAGILILSSGLIIWSMQFIMGMQC 92

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             + ++ L Q GA ++S    +   LRE+   +   + A + G  +VAEIGSM+I +EID
Sbjct: 93  GLEASYTLKQIGAPLYSGIFNAYCSLREMAPYMYGYIFAAKVGCGLVAEIGSMRIADEID 152

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRF 301
           A+  MG+     L+  RI A  I++P L  +      I   +V       +    +   F
Sbjct: 153 AMEVMGVRSRSYLVGTRIMAAWIAMPFLFTVGLGLMYISMYLVTVVQLGGVSAGGYNYIF 212

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
                  +    +IK   M   I  V+   G+     S  +GK     ++ ++ ++ +I 
Sbjct: 213 WLYQNPLDFLFSMIKMLSMGTTIVFVSCYYGYTASGGSVGVGKNTAKSMMLNMVLIHVIG 272

Query: 362 SLFAIFYFAI 371
            L    ++ +
Sbjct: 273 LLTTQLFWGL 282


>gi|254818557|ref|ZP_05223558.1| hypothetical protein MintA_01474 [Mycobacterium intracellulare ATCC
           13950]
          Length = 289

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 4/255 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +  + LG                 +  +      +RQ  ++  + V   +L++ 
Sbjct: 29  VVRHPLASLNTLGEQYILAVRTVEYCMVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  ++ Q A   +Q GA   +     +  +R+   L+ AV++A   GSAI A++GS  
Sbjct: 89  PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE DA+  MG+  +R L+ PR  A I+    LT +  F   + + +    +       
Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F + F S AT  ++   L+KA      + ++A ++G         +   V   VV+SI +
Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268

Query: 357 VIIIDSLFAIFYFAI 371
           ++I++   +  Y  +
Sbjct: 269 LMIVNVGISQLYNTL 283


>gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 [Mycobacterium gilvum PYR-GCK]
 gi|315441852|ref|YP_004074731.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213739|gb|ABP43143.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260155|gb|ADT96896.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 269

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 111/239 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G + + T +   +  K        + Q ++V    +   + +S     + +     
Sbjct: 25  LSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 85  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++    
Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 263


>gi|182434832|ref|YP_001822551.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326775350|ref|ZP_08234615.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
 gi|178463348|dbj|BAG17868.1| putative YrbE family protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326655683|gb|EGE40529.1| protein of unknown function DUF140 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 267

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 105/253 (41%), Gaps = 3/253 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173
            ++ +++ S  Q       +           +        ++       V    + V++ 
Sbjct: 2   AMLSWLDRSGDQLTFYVKALVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMVA 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G
Sbjct: 62  MTLFTGTVVGLQGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEE+DA+  MG+  +  L++ RI A ++++  L  +   S+ + +  +   +    
Sbjct: 122 AMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQS 181

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+   +  ++   ++K    +  + +     GF        +G  V   V  +
Sbjct: 182 AGTYDHYFNLFLSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241

Query: 354 ISIVIIIDSLFAI 366
           I ++ + D   ++
Sbjct: 242 IVLISVTDFFLSL 254


>gi|291004489|ref|ZP_06562462.1| putative ABC transport system permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 279

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 106/253 (41%), Gaps = 7/253 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173
           ++F++D   Q       ++   +        K  +  L    +  G   V      V++ 
Sbjct: 16  LEFLDDLGDQMSFYLRTLAWIPKAVTRYV--KETMRLLAEVSFGSGALAVIGGTVGVMVG 73

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TG V+  QG   L+Q G   F+  + +    REI  L+  + ++   GS   A++G
Sbjct: 74  MTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTAQLG 133

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I++EIDA+ TMG+  +  L++ R+ A  +++  L +L   ++ + A +V    Y   
Sbjct: 134 AMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVYGQS 193

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+      ++     K    +  + +     G+        +G  V   V  +
Sbjct: 194 AGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAVRTA 253

Query: 354 ISIVIIIDSLFAI 366
           I    ++D   ++
Sbjct: 254 IVTTALLDFFLSL 266


>gi|328880857|emb|CCA54096.1| toluene tolerance protein [Streptomyces venezuelae ATCC 10712]
          Length = 268

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            ++             + +L  + R +  V             + V++ ++  TG V+  
Sbjct: 14  QLLFYVKALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALEQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+  
Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSQGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + I     GF        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIIAHCYYGFRASGGPAGVGIAVGRSVRNAIVLISVTDFFL 253

Query: 365 AI 366
           ++
Sbjct: 254 SL 255


>gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1]
          Length = 269

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 112/239 (46%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G + + T +   + +K        + Q ++V    +   + +S     + +     
Sbjct: 25  LSVIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG  +T +++AG   SA+ A++GS  I EE+DA+R +G
Sbjct: 85  LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD +  L+ PR+ A  +   LL+ +   + ++GA +    +  +    F +       L 
Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA       G++A  +G  V   +  +G  V+  VV +  ++ +++++    
Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 263


>gi|145220618|ref|YP_001131296.1| hypothetical protein Mflv_0012 [Mycobacterium gilvum PYR-GCK]
 gi|145213104|gb|ABP42508.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 312

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 1/290 (0%)

Query: 83  SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF-INDSCSQAHILGLVISNTGE 141
           S  +   R        Q     +S   +   +G  + +  +    +      L +     
Sbjct: 17  SECTAAERTSGMTTADQPVRRDDSVHAVQDWVGGYVRRHPLASLATVGDQFVLGVRTLQW 76

Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201
           F    +  +      +RQ  ++  + V   +L++   G  ++ Q A    Q GA   +  
Sbjct: 77  FFVDLFTGRFQFQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGA 136

Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261
              +  +R+   L  A+++A   GSAI A++GS K+ EE DA+  MG+  +R L+ PR  
Sbjct: 137 ASGLAVIRQAASLTAAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRLVVPRFA 196

Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321
           A I+    LT +  F   + + +    + +     F + F S AT  ++   L+KA    
Sbjct: 197 AAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALVKAVIFG 256

Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             + IV+ ++G +       +   V   VV+SI ++++++   +  Y  +
Sbjct: 257 AIVAIVSCQKGLSTQGGPTGVANSVNAAVVESILVLMVVNVAISQLYILM 306


>gi|300789441|ref|YP_003769732.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299798955|gb|ADJ49330.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 264

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 108/249 (43%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
             + +     G + +   +   +  +    +   + Q +++    +   IL+S   GAVI
Sbjct: 10  QKAANGLREFGRMCAMGLDVLLAMLRRPYQVREFVLQFWFIASVSITPAILVSIPFGAVI 69

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           + Q     SQ GA+ F+     +  +++   ++T ++IAG  GSAI A++G+  I EEI 
Sbjct: 70  SLQLGSLTSQIGAQQFNGAASVLAVVQQASPIVTTLIIAGAGGSAICADLGARSIREEIA 129

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+  +  L+ PR+ A +    LL  L +   ++G               + + F+
Sbjct: 130 AMEVLGVSPIHRLVVPRVQAAVGVSVLLNGLVSVVGVLGGYFFGVIIQGGTPGAYLASFN 189

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           + A L ++    IKA       G+VA   G         +G  V   VV +  ++  +++
Sbjct: 190 ALAQLPDLVVSSIKAVIFGYLAGVVAAYRGLNPKGGPKGVGDVVNQSVVITFLLLFFVNT 249

Query: 363 LFAIFYFAI 371
           +    Y  +
Sbjct: 250 VLTALYLQL 258


>gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894375|gb|EFG74128.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 256

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 106/241 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   + + +   + +K        + Q ++V    +   +L++     ++      
Sbjct: 12  LRSAGEFFAMSLDTFVAMFKLPFPWREFLLQTWFVARVSIIPTLLLTIPFTVLVVFTMNI 71

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I++E+DA+R MG
Sbjct: 72  LLVEFGAADFSGTGAATASVTQIGPVVTVLVVAGTGATAMCADLGARAIHDELDALRVMG 131

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D VR L +PR+ A  +    L  L     + G+         +    F +       L 
Sbjct: 132 VDPVRRLAAPRVLAATVVAVSLVSLVTLVGLGGSFFFSVFIQHVTPGAFAAGLTLLTHLP 191

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           ++  GL+K      A  ++A  +G +VG     +G  V   VV S   + +I+ +    Y
Sbjct: 192 DLVLGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINIVATAVY 251

Query: 369 F 369
           +
Sbjct: 252 Y 252


>gi|223937195|ref|ZP_03629102.1| protein of unknown function DUF140 [bacterium Ellin514]
 gi|223894217|gb|EEF60671.1| protein of unknown function DUF140 [bacterium Ellin514]
          Length = 311

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 117/278 (42%), Gaps = 5/278 (1%)

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK-GFLL 154
            +     +    +    + G+K+++F+             +   G       + +     
Sbjct: 37  PERHYLLWAPLPRAYSNYFGRKVIRFLLTIQGLGAFF---LITLGVIFTKFRRARSVVWP 93

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            + +++   GV  +P+ + +S   G V+  Q    L++  A  +   +M ++ +REIG +
Sbjct: 94  LIWQELNRSGVKLLPMFLFLSLAMGLVVIGQAVSWLTRVNAVQYLGTIMVLVVVREIGPM 153

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           LTA+++  R+G++ V E+G+ +   E++A+  + +D +  L+ PR+  + I +  LT+  
Sbjct: 154 LTALLVLARAGTSNVIELGTARALGEVEALEALVIDPIHYLVMPRVIGMAIGVFSLTVYF 213

Query: 275 NFSAIIGASIVIWKY-YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
              +++   +  +     +    +F +     +  +      K+      I ++    G 
Sbjct: 214 ILGSLLSGYMWAFLQDVPLRPTDYFEQLAGALSYTDFIVLGTKSILFGVIISVITCYHGL 273

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           A  +    +       V QS+   + +D+LF + Y  +
Sbjct: 274 AQPLQLEEVSNATVRAVAQSVIACVALDALFIVIYLVL 311


>gi|254773146|ref|ZP_05214662.1| hypothetical protein MaviaA2_00471 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 289

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 4/255 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +  + LG                 +  +      +RQ  ++  + V   +L++ 
Sbjct: 29  VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  ++ Q A   +Q GA   +     +  +R+   L+ AV++A   GSAI A++GS  
Sbjct: 89  PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE DA+  MG+  +R L+ PR  A I+    LT +  F   + + +    +       
Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F + F S AT  ++   L+KA      + ++A ++G         +   V   VV+SI +
Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268

Query: 357 VIIIDSLFAIFYFAI 371
           ++I++   +  Y  +
Sbjct: 269 LMIVNVGISELYNTL 283


>gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_15455 [Mycobacterium kansasii ATCC
           12478]
          Length = 255

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 107/242 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + + +   + +K+       + Q ++V    +   +L++     ++      
Sbjct: 11  LRSVGEFFAMSLDTLVAMFKWPFPWREFLLQSWFVARVSIIPTLLLAIPFTVLVVFTLNI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I++E+DA+R MG
Sbjct: 71  LLVEFGAADFSGTGAATASVTQIGPIVTVLVVAGTGATAMCADLGARTIHDELDALRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +R L +PR+ A  +    L  L     + G+         +    F +       L 
Sbjct: 131 VDPIRRLAAPRVLAATVVAVSLVSLVTLVGLAGSFAFSVFVQHVTPGAFAAGLTLITHLP 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +  GL+K      A  ++A  +G +VG     +G  V   VV S   + +I+ +    +
Sbjct: 191 ELILGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINIVATAVF 250

Query: 369 FA 370
           + 
Sbjct: 251 YV 252


>gi|297190650|ref|ZP_06908048.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197719877|gb|EDY63785.1| ABC-transporter integral membrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 267

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +I             + +L  + R +  V             + V+I ++  TG V+  
Sbjct: 13  QLIFYVRALLWIPKTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGL 72

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 73  QGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F   
Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRWVTVLFNGQSAGTYDHYFALF 192

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 193 LSPDDVLLSILKVLIFSVMVILAHCYHGFRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 252

Query: 365 AI 366
           ++
Sbjct: 253 SL 254


>gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Rv]
 gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97]
 gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148663365|ref|YP_001284888.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra]
 gi|148824708|ref|YP_001289462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis F11]
 gi|167967132|ref|ZP_02549409.1| conserved membrane protein YrbE4A [Mycobacterium tuberculosis
           H37Ra]
 gi|215405542|ref|ZP_03417723.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|215413414|ref|ZP_03422098.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429007|ref|ZP_03426926.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T92]
 gi|215432469|ref|ZP_03430388.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|215447834|ref|ZP_03434586.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T85]
 gi|218755278|ref|ZP_03534074.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis GM
           1503]
 gi|219559568|ref|ZP_03538644.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T17]
 gi|224991916|ref|YP_002646605.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253800543|ref|YP_003033544.1| hypothetical protein TBMG_03546 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234087|ref|ZP_04927412.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis C]
 gi|254366847|ref|ZP_04982888.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552603|ref|ZP_05143050.1| hypothetical protein Mtube_19505 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260188553|ref|ZP_05766027.1| hypothetical protein MtubCP_21377 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202680|ref|ZP_05770171.1| hypothetical protein MtubT4_21968 [Mycobacterium tuberculosis T46]
 gi|260206868|ref|ZP_05774359.1| hypothetical protein MtubK8_21506 [Mycobacterium tuberculosis K85]
 gi|289445098|ref|ZP_06434842.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T46]
 gi|289449203|ref|ZP_06438947.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555767|ref|ZP_06444977.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           605]
 gi|289571734|ref|ZP_06451961.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T17]
 gi|289576235|ref|ZP_06456462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85]
 gi|289747337|ref|ZP_06506715.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|289752222|ref|ZP_06511600.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T92]
 gi|289755631|ref|ZP_06515009.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|289759660|ref|ZP_06519038.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289763681|ref|ZP_06523059.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis GM 1503]
 gi|294995729|ref|ZP_06801420.1| hypothetical protein Mtub2_14793 [Mycobacterium tuberculosis 210]
 gi|297636157|ref|ZP_06953937.1| hypothetical protein MtubK4_18625 [Mycobacterium tuberculosis KZN
           4207]
 gi|297733157|ref|ZP_06962275.1| hypothetical protein MtubKR_18795 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526981|ref|ZP_07014390.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777851|ref|ZP_07416188.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu001]
 gi|306782582|ref|ZP_07420919.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu002]
 gi|306786400|ref|ZP_07424722.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu003]
 gi|306790769|ref|ZP_07429091.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu004]
 gi|306795299|ref|ZP_07433601.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu005]
 gi|306799487|ref|ZP_07437789.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu006]
 gi|306805333|ref|ZP_07442001.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu008]
 gi|306809519|ref|ZP_07446187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu007]
 gi|306969626|ref|ZP_07482287.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu009]
 gi|306973969|ref|ZP_07486630.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu010]
 gi|307081677|ref|ZP_07490847.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu011]
 gi|307086285|ref|ZP_07495398.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu012]
 gi|313660488|ref|ZP_07817368.1| hypothetical protein MtubKV_18790 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2924438|emb|CAA17738.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A
           [Mycobacterium tuberculosis H37Rv]
 gi|31620274|emb|CAD95717.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A
           [Mycobacterium bovis AF2122/97]
 gi|121495068|emb|CAL73554.1| Conserved hypothetical integral membrane protein yrbE4A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599616|gb|EAY58720.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis C]
 gi|134152356|gb|EBA44401.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507517|gb|ABQ75326.1| conserved hypothetical integral membrane protein YrbE4a
           [Mycobacterium tuberculosis H37Ra]
 gi|148723235|gb|ABR07860.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis F11]
 gi|224775031|dbj|BAH27837.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253322046|gb|ACT26649.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289418017|gb|EFD15257.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T46]
 gi|289422161|gb|EFD19362.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440399|gb|EFD22892.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           605]
 gi|289540666|gb|EFD45244.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85]
 gi|289545488|gb|EFD49136.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T17]
 gi|289687865|gb|EFD55353.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           02_1987]
 gi|289692809|gb|EFD60238.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           T92]
 gi|289696218|gb|EFD63647.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           EAS054]
 gi|289711187|gb|EFD75203.1| hypothetical integral membrane protein yrbE4A [Mycobacterium
           tuberculosis GM 1503]
 gi|289715224|gb|EFD79236.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298496775|gb|EFI32069.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308213831|gb|EFO73230.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu001]
 gi|308324772|gb|EFP13623.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu002]
 gi|308329036|gb|EFP17887.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu003]
 gi|308332875|gb|EFP21726.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu004]
 gi|308336458|gb|EFP25309.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu005]
 gi|308340336|gb|EFP29187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu006]
 gi|308344191|gb|EFP33042.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu007]
 gi|308348121|gb|EFP36972.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu008]
 gi|308352885|gb|EFP41736.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu009]
 gi|308356698|gb|EFP45549.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu010]
 gi|308360652|gb|EFP49503.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu011]
 gi|308364269|gb|EFP53120.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis
           SUMu012]
 gi|323717843|gb|EGB27034.1| hypothetical protein TMMG_03675 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905343|gb|EGE52276.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis
           W-148]
 gi|328460274|gb|AEB05697.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN
           4207]
 gi|328864220|gb|AEB53193.1| conserved integral membrane protein YRBE4A [Mycobacterium
           tuberculosis]
          Length = 254

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 98/247 (39%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I      A  +G     + +   ++++        + Q + V    +   +L+S     
Sbjct: 1   MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTV 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EE
Sbjct: 61  LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D ++ L+ PR+ A  +   LL  L     + G          +    F + 
Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFING 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L  +    IKA       G+V    G  V      +G  V   VV +   + +I
Sbjct: 181 LTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240

Query: 361 DSLFAIF 367
           + +    
Sbjct: 241 NVVMTAI 247


>gi|41406190|ref|NP_959026.1| hypothetical protein MAP0092 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394538|gb|AAS02409.1| hypothetical protein MAP_0092 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 289

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 4/255 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +  + LG                 +  +      +RQ  ++  + V   +L++ 
Sbjct: 29  VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G  ++ Q A   +Q GA   +     +  +R+   L+ AV+ A   GSAI A++GS  
Sbjct: 89  PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLTASAVGSAITADLGSRT 148

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           + EE DA+  MG+  +R L+ PR  A I+    LT +  F   + + +    +       
Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           F + F S AT  ++   L+KA      + ++A ++G         +   V   VV+SI +
Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268

Query: 357 VIIIDSLFAIFYFAI 371
           ++I++   +  Y  +
Sbjct: 269 LMIVNVGISELYNTL 283


>gi|296138972|ref|YP_003646215.1| hypothetical protein Tpau_1245 [Tsukamurella paurometabola DSM
           20162]
 gi|296027106|gb|ADG77876.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 287

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 4/270 (1%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY-KFKGFLLSLI- 157
           R      F NL    GK    F +        +  VI            +    L  +  
Sbjct: 6   RPRGTRWFYNLFGSSGKAWTGF-DSLGHVVSFIAEVIRTVPHAIKHYRSQIMYILTDITW 64

Query: 158 -RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
            R    VG    PV+ ++    GA++A QG   L+  G    +    S    RE   LL 
Sbjct: 65  GRGALVVGGGTAPVLAVLGITVGAIVAVQGFAILNMLGMGPLTAVAASFANTREFAPLLA 124

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V  A ++G  + AEIG+M+INEEIDA+ ++GL  V  +++ R+ A +I++  + ++   
Sbjct: 125 GVGFAAQAGCRMTAEIGAMRINEEIDALESLGLRSVSFVVTTRVLAGLIAVIPVYLITLI 184

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + +  + ++   Y +P   +   F    + ++I   +IK      A+ I+   +GF   
Sbjct: 185 LSWLSCAWMVTSVYGMPTGTYQHYFSQFVSASDIIFSVIKVAVFLVAVIIIHCYQGFFAS 244

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                +G      +  S+  V+I++ +  +
Sbjct: 245 GGPEGVGTASGRAIRASLVAVVILNLVMTV 274


>gi|326331738|ref|ZP_08198026.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325950537|gb|EGD42589.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 257

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 115/248 (46%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
              S    +G +   TGE    ++  K  L   + Q +++    +   +L+S   GAVI+
Sbjct: 4   QFASLVRGVGGMGLMTGEVVKGTFTTKFQLREFLEQAWFITSVTMMPAVLVSIPFGAVIS 63

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q      Q GA+ F+     +  +RE   +  A++IAG +GSAI +++GS KI EEIDA
Sbjct: 64  LQVGNLAGQLGAQSFAGATAVLAVVREAAPMAAALIIAGAAGSAICSDMGSRKIREEIDA 123

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  +G+D V  L+ PR+ A +    ++  +   + I G               F S F +
Sbjct: 124 MEVLGIDPVVRLVIPRVLACLFVSVMINGIVIATGIGGGYFFTVIVQGGSAGAFLSSFTA 183

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
            A+L +++  ++K+        I+    G       + +G+ V   V+ +  ++ +++S+
Sbjct: 184 LASLPDLYISMVKSALFGFLAAIIGAYNGLNAQGGPSGVGRAVNEAVIIAFMMLFVLNSI 243

Query: 364 FAIFYFAI 371
               YF I
Sbjct: 244 MTAVYFQI 251


>gi|315442585|ref|YP_004075464.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260888|gb|ADT97629.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 237

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 93/230 (40%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            + +    +++        + Q + +    +   +L++     ++A      L + GA  
Sbjct: 1   MSLDTFVKTFRRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAAD 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
            S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++ L+ 
Sbjct: 61  LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A      LL  L     + G  +       +    F +       L  +    IKA
Sbjct: 121 PRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILAEIKA 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                  G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 181 LLFGFVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230


>gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC 19977]
 gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 255

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 100/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               + A  +G  +S +     + ++        + Q +++    +   +L++     ++
Sbjct: 3   QQLAAPARAVGGFVSMSLATFRNIFRRPFQGQEFLDQTWFIARVSLLPTLLVAIPFTVLV 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEID
Sbjct: 63  AFTLNILLREIGAADLSGAATAFGTVTQLGPVVTVLVVAGAGATAICADLGARTIREEID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +G+D ++ L+ PR+ A      LL  L     ++G  +       +    F +   
Sbjct: 123 AMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFINGLT 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    +KA       G+V    G  V      +G  V   VV +   + +I+ 
Sbjct: 183 VLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLFVINV 242

Query: 363 LFAIF 367
           +    
Sbjct: 243 VMTAI 247


>gi|295135743|ref|YP_003586419.1| ABC-type transporter permease protein [Zunongwangia profunda
           SM-A87]
 gi|294983758|gb|ADF54223.1| ABC-type transporter permease protein [Zunongwangia profunda
           SM-A87]
          Length = 225

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 2/216 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVL 214
           + +++  + +  + +V  +SF  GAV+A Q A  L+     +           + E    
Sbjct: 11  IFKEIDELIIGSLGIVCFLSFFIGAVVAIQTALNLNNPLIPKSLVAFAARQSVILEFSPT 70

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             ++++AG+ GS I + IGSM++ E+IDA+  MG++    LI P+I A +++ P +  ++
Sbjct: 71  FISIIMAGKVGSFITSSIGSMRVTEQIDALEVMGINSKNYLIFPKIIA-MLTYPFVIAIS 129

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
            F  I+GA +       +    F S         ++    IK    A  +  V    G+ 
Sbjct: 130 MFLGILGAYVAAVLGGFVKPDDFVSGLQDDFVTFHLIYAFIKTFLFAFILATVPAYHGYY 189

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +   +  +G+  TT  V +  ++II +        +
Sbjct: 190 MKGGALEVGQASTTAFVWTSVVLIITNYATTQLLLS 225


>gi|32141168|ref|NP_733570.1| ABC-transporter integral membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|256787959|ref|ZP_05526390.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|289771846|ref|ZP_06531224.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
 gi|24413768|emb|CAD55305.1| putative ABC-transporter integral membrane protein [Streptomyces
           coelicolor A3(2)]
 gi|289702045|gb|EFD69474.1| ABC-transporter integral membrane protein [Streptomyces lividans
           TK24]
          Length = 268

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            ++             + +L  + R +  V             + V+I ++  TG V+  
Sbjct: 14  QLLFYVRALLWVPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGI 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALDQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+  
Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSFLASRYVTVLFNGQSRGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIVAHCYYGYRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 253

Query: 365 AI 366
           ++
Sbjct: 254 SL 255


>gi|320007321|gb|ADW02171.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC
           33331]
          Length = 267

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 105/253 (41%), Gaps = 3/253 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173
            ++ +++ S  Q       +           K        ++       V    + V+I 
Sbjct: 2   SVLGWLDRSGEQLTFYVRALVWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIA 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TG+V+  QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G
Sbjct: 62  MTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEE+DA+  MG+  +  L++ RI A ++++  L  +   S+ + +  +   +    
Sbjct: 122 AMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVLFNGQS 181

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+   +  ++   ++K    +  + +     GF        +G  V   V  +
Sbjct: 182 AGTYDHYFNLFLSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241

Query: 354 ISIVIIIDSLFAI 366
           I ++ + D   ++
Sbjct: 242 IVLISVTDFFLSL 254


>gi|269124785|ref|YP_003298155.1| hypothetical protein Tcur_0520 [Thermomonospora curvata DSM 43183]
 gi|268309743|gb|ACY96117.1| protein of unknown function DUF140 [Thermomonospora curvata DSM
           43183]
          Length = 262

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 110/243 (45%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
              + +G +     E    ++  + +    + Q +++       VIL++   GA +A Q 
Sbjct: 12  GLLNQVGELFVVALEGLRRTWDVRTWFWEFVEQCWFLARVTSIPVILVALPLGATVALQV 71

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+  +   + +  +RE+  +  A++IAG  GSA+ A++G+ +I +E+DA+  
Sbjct: 72  GQVAAQLGAQSATGGAVIVGLVREVAPIAAAMIIAGAGGSAMTADMGTRRIRDELDAMEV 131

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           M ++ +  L++PR+WA  +   LL  L   S   G  +      D+    +F    S   
Sbjct: 132 MAINPIHRLVTPRLWAASLISTLLVSLVVLSGAAGGFVFNVLLQDVTPGAYFDGATSLLQ 191

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            +++   L+KA       GIVA   G         +G+ V   +V +  +V  ++ +   
Sbjct: 192 TSDLVVTLLKAWLFGMIAGIVACYMGMNCASTPVGVGRAVNQAIVVAFLLVFALNYVITT 251

Query: 367 FYF 369
            YF
Sbjct: 252 VYF 254


>gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 254

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 99/247 (40%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I      A  +G  +  + +  A  ++    L   + Q + +    +   +L++     
Sbjct: 1   MIEQLAVPARAVGGFVEMSLDTFAKIFRRPFQLKEFLDQTWMIARVSLVPTLLVAIPFTV 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EE
Sbjct: 61  LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D ++ L+ PR+ A      LL  L     + G  +       +    F + 
Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L  +    IKA       G+V    G  V      +G  V   VV +   + +I
Sbjct: 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240

Query: 361 DSLFAIF 367
           + +    
Sbjct: 241 NVIMTAV 247


>gi|326331737|ref|ZP_08198025.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950536|gb|EGD42588.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 280

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 107/254 (42%), Gaps = 10/254 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VPVV 171
           + +        G  +    +  A + +  + +   ++  +  V             V V+
Sbjct: 13  VKEQRQAVEGYGDQLLFYAKALAWAPRTIRRYKREVLNILAEVAFGAGGLTMIAGTVGVI 72

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++F  G+ +  QG   LSQ G   FS  + +    RE+  L++++ +A   G    A 
Sbjct: 73  AFMAFFAGSEVGIQGYASLSQIGVAKFSAFISAFFNTREVAPLISSIALAATVGCGYTAR 132

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+I+EEIDA+  MG+  +  L++ R+ A  +++  L I+A  ++ +   ++    Y 
Sbjct: 133 LGAMRISEEIDALEAMGVPSLPYLVTTRMIAGFLAVIPLYIVALCASYLSPRLITTLMYG 192

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
                +   F +     +I    +K   +A AI ++    G+        +G  V   + 
Sbjct: 193 QSGGTYDHYFLAFLPPIDILYSFLKLIILAVAIILIHCYYGYTASGGPAGVGIAVGKAIR 252

Query: 352 QSISIVIIIDSLFA 365
            SI  V++ D   +
Sbjct: 253 TSIVTVVVADFFLS 266


>gi|257054990|ref|YP_003132822.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
 gi|256584862|gb|ACU95995.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Saccharomonospora viridis
           DSM 43017]
          Length = 267

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 96/223 (43%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           +     G + +   E      +        ++Q +++    +    L++   G VIA   
Sbjct: 17  AAIRQAGKLYALALEVLRCIPRRPFQFREFVQQFWFIASVSILPTALVAIPFGGVIALHV 76

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
               +Q GA+ F+     +  +++   ++TA++IAG  GSA+ A++GS  I EEIDA++ 
Sbjct: 77  GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDALKV 136

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+  ++ L+ PR+ A +     L  + +   + G         D     + + F + A 
Sbjct: 137 LGVSPIQRLVVPRVLAAMAVAVFLNGMVSVVGVCGGYFFNVIMQDGTPGAYLASFSALAQ 196

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           L +++ G IKA       G+VA   G         +G  V   
Sbjct: 197 LPDLWIGEIKALVFGFVAGVVAAHRGLNPSAGPKGVGDAVNQS 239


>gi|282866016|ref|ZP_06275064.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
 gi|282559055|gb|EFB64609.1| protein of unknown function DUF140 [Streptomyces sp. ACTE]
          Length = 267

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 105/253 (41%), Gaps = 3/253 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173
            ++ +++ S  Q       +           +        ++       V    + V+I 
Sbjct: 2   SMLGWLDRSGEQLTFYVRALVWIPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIA 61

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++  TG+V+  QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G
Sbjct: 62  MTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLG 121

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEE+DA+  MG+  +  L++ RI A ++++  L  +   S+ + +  +   +    
Sbjct: 122 AMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYITVLFNGQS 181

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+   +  ++   ++K    +  + +     GF        +G  V   V  +
Sbjct: 182 AGTYDHYFNLFLSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241

Query: 354 ISIVIIIDSLFAI 366
           I ++ + D   ++
Sbjct: 242 IVLISVTDFFLSL 254


>gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478]
          Length = 254

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 98/247 (39%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I      A  +G     + +   ++ +        + Q + V    +   +L+S     
Sbjct: 1   MIQQLAVPARAVGGFFEMSIDTGRAALRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTV 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EE
Sbjct: 61  LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D ++ L+ PR+ A  +   LL  L     + G  +       +    F + 
Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L  +    +KA       G+V    G  V      +G  V   VV +   + +I
Sbjct: 181 LTVLTGLRELILAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240

Query: 361 DSLFAIF 367
           + +    
Sbjct: 241 NVVMTAI 247


>gi|239982860|ref|ZP_04705384.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291454703|ref|ZP_06594093.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
 gi|291357652|gb|EFE84554.1| ABC-transporter integral membrane protein [Streptomyces albus
           J1074]
          Length = 268

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 102/242 (42%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
            +I       A     + +L  + R +  V             V V+I ++  TG V+  
Sbjct: 14  QLIFYVKALAAIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTVGVMIAMTLFTGTVVGL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  +   +       +   F+  
Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRYITVFFNGQSRGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     GF        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVLIFSVLVILAHCYYGFRAQGGPAGVGVAVGRSVRNAIVLISVTDFFL 253

Query: 365 AI 366
           ++
Sbjct: 254 SL 255


>gi|188995184|ref|YP_001929436.1| hypothetical protein PGN_1320 [Porphyromonas gingivalis ATCC 33277]
 gi|188594864|dbj|BAG33839.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 217

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 1/207 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G          +   +++     LI+++  +GV  V +VI+ISF  GAVI  Q + 
Sbjct: 6   LQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLSL 65

Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
            ++      F        + L E    +  +++AG+ GS+I +E+G+M++ E+IDA+  +
Sbjct: 66  NMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVI 125

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G++    LI P+I   ++ +P+L+I++  + I+G  +      ++P + F        + 
Sbjct: 126 GVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSP 185

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFA 334
            N+F  +IK+   A  I  VA   G+ 
Sbjct: 186 YNVFYSIIKSVAYAFIISSVAGYYGYT 212


>gi|311744212|ref|ZP_07718016.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311312385|gb|EFQ82298.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 279

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 10/257 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYK----FKGFLLSLIRQMYY------VGVSGV 168
             F+ +   +   LG  +    +  A + +    ++  +   + ++ +      V    V
Sbjct: 9   RAFVTERRRRVETLGDQLIFYVKALAWTPRTVRLYRKEISKTLAEVVFGVGGISVIAGTV 68

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            V+  ++F  G  +   G   LS+ G   F+  + +    RE+  L+ A+ +A   G   
Sbjct: 69  GVIAFLAFFAGTGVGLNGYAALSEIGVAKFTAFISAYFNTREVAPLVAAIALAATVGCGY 128

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A +G+M+I+EEIDA+  MG+  +  L++ R+ A  I++  L  +A  ++ +   ++   
Sbjct: 129 TARLGAMRISEEIDALEVMGVPSLPFLVTTRMIAAFIAVIPLYSVALVASYLAPRLITTL 188

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            Y      +   F       +I     K   +A  I ++    G+        +G+ V  
Sbjct: 189 IYGESAGTYDHYFIQFLPPGDILWSFFKLAVLAVGIILIHCYYGYTASDGPAGVGRAVGR 248

Query: 349 CVVQSISIVIIIDSLFA 365
            +  SI  V++ D    
Sbjct: 249 AIRTSIVFVVVTDFFLT 265


>gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 [Mycobacterium gilvum PYR-GCK]
 gi|145214632|gb|ABP44036.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 237

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 93/230 (40%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            + +    +++        + Q + +    +   +L++     ++A      L + GA  
Sbjct: 1   MSLDTFVKTFRRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAAD 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
            S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++ L+ 
Sbjct: 61  LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A      LL  L     + G  +       +    F +       L  +    IKA
Sbjct: 121 PRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILAEIKA 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                  G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 181 LLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230


>gi|239931479|ref|ZP_04688432.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291439855|ref|ZP_06579245.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
 gi|291342750|gb|EFE69706.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 268

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 101/244 (41%), Gaps = 10/244 (4%)

Query: 133 GLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVI 182
           G  +           +  + +L  + R +  V             + V+I ++  TG V+
Sbjct: 12  GDHLLFYARALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVV 71

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+D
Sbjct: 72  GLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVD 131

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F 
Sbjct: 132 ALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRSVTVLFNGQSRGTYDHYFA 191

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D 
Sbjct: 192 LFLSPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDF 251

Query: 363 LFAI 366
             ++
Sbjct: 252 FLSL 255


>gi|315442434|ref|YP_004075313.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260737|gb|ADT97478.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +  +      +RQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 44  VRTLQWFFVDLFTGRFQWQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 103

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L  A+++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 104 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   + + +    + +     F + F S  T  ++   L+
Sbjct: 164 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFTTTGDMIVALV 223

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV+SI I+++++   +  Y  +
Sbjct: 224 KAVIFGAIVAIVSCQKGMSTRGGPTGVANSVNAAVVESILILMVVNVAISQLYIML 279


>gi|291298383|ref|YP_003509661.1| hypothetical protein Snas_0857 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567603|gb|ADD40568.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM
           44728]
          Length = 262

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 86/194 (44%)

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++F TG  +  QG   L+Q G   F+  + +    REI  L+  + ++   G+   A++
Sbjct: 56  FLTFFTGTEVGLQGYQALNQVGTSAFTGFISAYFNTREIAPLVAGIALSATVGAGFTAQL 115

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M++NEE+DA+  MG+  +  L++ R+ A + +   L +LA  S+ +    V   Y+  
Sbjct: 116 GAMRVNEEVDALEVMGVRSLPYLVTTRMLAGLAACVPLYVLALLSSYVATRGVAIFYFGQ 175

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F +     ++     K    +  +  V    G+        +G  V   V  
Sbjct: 176 SSGTYDHYFSTFLVPGDVLWSFGKVLCFSVIVIGVHCYYGYHASGGPAGVGVAVGRAVRT 235

Query: 353 SISIVIIIDSLFAI 366
           +I  V I+D   ++
Sbjct: 236 AIVAVNIVDFFVSL 249


>gi|118469389|ref|YP_885535.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170676|gb|ABK71572.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 289

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 106/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +          +  +      IRQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 48  VRTVQYLFTELFTGRFQWQEFIRQGAFMASTAVVPTVLVALPIGVTLSIQFALLAGQVGA 107

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L  AV++A   GSAI A++GS K+ EE DA+  MG+  ++ L
Sbjct: 108 TSLAGAASGLAVIRQAASLTAAVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRL 167

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   I + +    + D     F + F S AT  ++   LI
Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFIASFLFNVYFQDGAPGSFVATFASFATTGDMIVALI 227

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +V+ ++G +       +   V   VV+SI ++++++   +  Y  +
Sbjct: 228 KAVIFGAIVAVVSCQKGLSTVGGPTGVANSVNAAVVESILLLMVVNVAISQLYIML 283


>gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 254

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 97/239 (40%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
           A  +G       +   ++++    L   + Q + +    +   +L+S     ++A     
Sbjct: 9   ARAVGGFFEMMIDTGRATFRRPFQLGEFLEQTWMIARVSLVPTLLVSIPFTVLVAFTLNI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G
Sbjct: 69  LLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D V  L+ PR+ A  +   LL  L     + G  +       +    F +       L 
Sbjct: 129 IDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLR 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 189 ELVLAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247


>gi|317508867|ref|ZP_07966506.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252828|gb|EFV12259.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 315

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 109/259 (42%), Gaps = 4/259 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
            +V  I  + S    +G ++  +            + +      + Q  ++        +
Sbjct: 51  AVVGGIRQADSSLQTVGRLVVLSLHAFRFLAVDLIRLQHPWRETVSQCAFLIRVTATPAL 110

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           L+S   G +++ Q    + Q GA   S  +  +  +++   ++ A+++ G +GSA+  ++
Sbjct: 111 LMSVPFGVILSVQVNSLVKQIGAVSMSGAVGGMGVMQQGAPIVAALLLGGAAGSAVATDL 170

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+  I EEIDA+  MG++ VR L+SPR+ A++   PLL +   F  +    ++       
Sbjct: 171 GARSIREEIDAMLVMGINPVRRLVSPRLAAILFVAPLLCVFIIFMGLAAGYVIAIVGMSG 230

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               + + F + A + ++   LIK+        ++A + G      +  +       VV 
Sbjct: 231 TPGSYIASFSAFARVEDMAVALIKSLLFGVVAILIACQRGLETRGGARGVADAANASVVL 290

Query: 353 SISIVIIIDSLFAIFYFAI 371
            +  ++ ++ +       I
Sbjct: 291 GVISIVGMNLVLTELTTLI 309


>gi|134098920|ref|YP_001104581.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133911543|emb|CAM01656.1| putative ABC-transporter integral membrane protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 243

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 109/237 (45%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           + +   +     ++        ++Q +++    +   IL+S   GAVI+ Q     +Q G
Sbjct: 1   MFALGLDVAVLMFRRPFQFREFVQQFWFIASVSITPAILVSIPFGAVISLQLGTLTAQIG 60

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A+ F+     +  +++   ++T ++IAG  GSAI A++GS  I EEI A+  +G+  V+ 
Sbjct: 61  AKSFNGAASVLAVVQQASPIVTTLVIAGAGGSAICADLGSRTIREEIAAMEVLGVSPVQR 120

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           LI PR+ A +++  LL  L +   + G         D     + + F++ A L +++   
Sbjct: 121 LIVPRVLAAVLTAMLLNGLVSVVGVAGGYFFNVIVQDGTPGAYLASFNALAQLPDLWVST 180

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            KA       G+VA   G      S  +G  V   VV +  ++  ++++    Y  +
Sbjct: 181 FKALIFGFLAGVVAAYRGLNPRGGSKGVGDVVNQSVVITFLLLFFVNTVITALYLQL 237


>gi|300789440|ref|YP_003769731.1| ABC transporter permease [Amycolatopsis mediterranei U32]
 gi|299798954|gb|ADJ49329.1| ABC transport system permease protein [Amycolatopsis mediterranei
           U32]
          Length = 271

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 98/252 (38%), Gaps = 1/252 (0%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G ++    +        L  V      +     +    +      +  +G   + V++ +
Sbjct: 8   GDRLFDLGDQLLFYVRALAAVPLAVTRYFREVVRLLAEVTFGSGALAVIG-GTIGVMVGL 66

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
              TG  +  QG   L+Q      +  L +    REI  L+  + ++   GS   A++G+
Sbjct: 67  CVFTGVTVGLQGFSALNQINISAMTGFLTAYFNTREIAPLVAGLALSSTVGSGFTAQLGA 126

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+I+EEIDA+  M +  +  L++ RI A  I++  L ++    + +G+ +    ++    
Sbjct: 127 MRISEEIDALEVMAVRSMPYLVTTRIVAGFIAIIPLYVIGLLISYLGSRLTTVVFFGQSG 186

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             +   F       ++     K    +  + +     G+        +G  V   V  SI
Sbjct: 187 GTYDHYFTLFLPPGDVLWSFGKVLVFSVGVILTHCFYGYRASGGPAGVGVAVGRAVRTSI 246

Query: 355 SIVIIIDSLFAI 366
            ++ ++D   ++
Sbjct: 247 VLISVLDLFLSL 258


>gi|169631675|ref|YP_001705324.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243642|emb|CAM64670.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 288

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 102/236 (43%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +       +            I Q  ++  S V   +L++   G  ++ Q A    Q GA
Sbjct: 47  VRAMQYMFSDIVHRAFPWREFIHQGAFMAGSAVVPTLLVAIPIGVTLSIQFALLAGQVGA 106

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EEIDA+  MG+  +R L
Sbjct: 107 SSLAGAASGVAIVRQGASLVAAVLMASAVGSAITADLGSRTMREEIDAMEVMGVSVIRRL 166

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A ++    LT    F   + + +    +       F + F S   + ++   L+
Sbjct: 167 VVPRVAAAVLVGVGLTGTTCFVGFLASYLFNVYFQHGAPGSFVATFASFTRVDDLVLALL 226

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IVA  +G         +   V   VV+SI ++++I+ L +  Y  +
Sbjct: 227 KAILYGLIVAIVACDKGLTTKGGPAGVANSVNAAVVESILVLMLINVLVSQVYVMV 282


>gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 267

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 102/251 (40%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
              K  +   +    +G      GE   +  K       L+ Q +++    +   +L++ 
Sbjct: 9   ATAKIASGVGTGLRAVGGFFELCGETFRAMAKRPFQWRELVLQSWFIVRVALLPTLLVAL 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
               ++       L +FGA   S     +  + +IG L+T +++AG   +AI A++G+  
Sbjct: 69  PFTVLVVFTLNILLVEFGAADLSGAGAGLGAVTQIGPLVTVLIVAGAGATAICADLGART 128

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I EEIDAIR +G+D ++ L+ PR+ A +    LL  L     + G  +      ++    
Sbjct: 129 IREEIDAIRVLGIDPIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSVYIQNVTPGA 188

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           + S       L  +    +KA       G+VA   G  V     S+G  V   VV +   
Sbjct: 189 YVSSLTFVTGLPEVIISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVNETVVYAFMA 248

Query: 357 VIIIDSLFAIF 367
           +  ++ +    
Sbjct: 249 LFAVNVVVTAI 259


>gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS]
 gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS]
 gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 254

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 98/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
               + A  +G  +  + +    +++        + Q + +    +   +L++     ++
Sbjct: 3   EQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLV 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEID
Sbjct: 63  AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R +G+D ++ L+ PR+ A      LL  L     + G  +       +    F +   
Sbjct: 123 AMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLT 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    IKA       G+V    G  V      +G  V   VV +   + +I+ 
Sbjct: 183 VLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINV 242

Query: 363 LFAIF 367
           +    
Sbjct: 243 IMTAV 247


>gi|326331672|ref|ZP_08197960.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950471|gb|EGD42523.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 277

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 102/247 (41%), Gaps = 7/247 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY-----YVGVSGVPVVILISFVTG 179
             S       V+            ++  L       +      VG   + V++L+S   G
Sbjct: 20  FGSFLTFSASVLLAVPATLVHH--WRTCLEHFSDICWGRGAIIVGGGTIGVMVLLSVSVG 77

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +  +G   L   G       + +    RE+G L+ A+ +  + G    A++G+M++NE
Sbjct: 78  TSLGIEGFNGLELVGLAPLVGFISATANTRELGPLVAALALGAQVGCRFTAQLGAMRVNE 137

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           E+DA+  M +  V  L++ R+ A ++++  L ++    + I +   +   +      F  
Sbjct: 138 EVDALEVMSVRPVNYLVATRLVATMLAIVPLYVIGLLGSYIASESTVVMLFGQSPGQFDH 197

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
            F    T+ +I   LIK    A  + ++    G AV   S ++G+     +  S  ++++
Sbjct: 198 YFLEFLTMRDIGFSLIKILIFAAIVVLIHCWYGLAVSAGSLNVGEATGRSIRASFVVIVV 257

Query: 360 IDSLFAI 366
           ++ L  +
Sbjct: 258 LNMLLTV 264


>gi|262201204|ref|YP_003272412.1| hypothetical protein Gbro_1221 [Gordonia bronchialis DSM 43247]
 gi|262084551|gb|ACY20519.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 349

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 89/195 (45%)

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G ++  Q    ++Q GA+           +++   L   +++ G   SAI A++G+ 
Sbjct: 148 IPLGIIVTVQIGNIINQLGAQSLLGAGSGFAVIQQAAPLAAGMLLGGAGASAIAADLGAR 207

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            + EEIDA+RTMG+D V  L+ PR+ A ++  PL+ +      ++ A  +   + D+   
Sbjct: 208 TVREEIDAMRTMGIDPVARLVVPRVLAAVVVAPLIALFIVLVGVLSAYYLAITFQDVGPG 267

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            ++  F S +++ +IF  L KA      I +V  + G         +   V   VV S  
Sbjct: 268 SYWQSFGSFSSVRDIFLALFKAVVFGFIIAVVGCQRGLEARGGPRGVADGVNATVVVSTV 327

Query: 356 IVIIIDSLFAIFYFA 370
            +I ++ +  + Y  
Sbjct: 328 GIIGVNLVLTLVYTV 342


>gi|302560791|ref|ZP_07313133.1| ABC-transporter integral membrane protein [Streptomyces
           griseoflavus Tu4000]
 gi|302478409|gb|EFL41502.1| ABC-transporter integral membrane protein [Streptomyces
           griseoflavus Tu4000]
          Length = 268

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 10/244 (4%)

Query: 133 GLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVI 182
           G  +           +    +L  + R +  V             + V+I ++  TG V+
Sbjct: 12  GDHLLFYARALLWVPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVV 71

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+D
Sbjct: 72  GLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVD 131

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F 
Sbjct: 132 ALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFA 191

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D 
Sbjct: 192 LFLSPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDF 251

Query: 363 LFAI 366
             ++
Sbjct: 252 FLSL 255


>gi|326333295|ref|ZP_08199542.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325948939|gb|EGD41032.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 267

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 102/250 (40%), Gaps = 10/250 (4%)

Query: 127 SQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG---------VPVVILISF 176
           S    LG  ++      +   + F  +   ++R +  V +           V V+  ++ 
Sbjct: 6   SALRELGEQLAFHARAYSHVPHAFHRYRKEVVRLLAEVAMGTGALALIGGTVLVIGFLTA 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            +G  +  Q        G    S    +    RE+  ++  + +    G+   A+IG+M+
Sbjct: 66  ASGIEVGLQAYTSFDNIGVSALSGFFSAYFNTREVAPIIAGIALTATVGAGFTAQIGAMR 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           ++EEIDA+  M +  V  L++ RI A +I++  L  +A     +   +V+   YD     
Sbjct: 126 VSEEIDALEVMAVPPVPYLVTTRIMAGLIAVIPLYAIAVMMCWLATRLVVTVGYDEAPGT 185

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +   F +     ++F  ++K   MA  +  V    GF        +G+ V   V  ++  
Sbjct: 186 YQHYFDTFLIPGDLFLSMLKVTIMALVVVSVCCYHGFKAAGGPAGVGRAVGRAVRSALIA 245

Query: 357 VIIIDSLFAI 366
           ++ +D +F I
Sbjct: 246 IMFVDLIFGI 255


>gi|169628107|ref|YP_001701756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240074|emb|CAM61102.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 106/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +         +RQ  +   + V  VIL++   G  ++ Q A    Q GA
Sbjct: 44  VRTIQWFFVDLFTGNFQWQEFVRQGAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGA 103

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     I  +R+   L+ A++++   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 104 TSLAGAASGIAIIRQAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   +GA +    + +     F + F + AT  ++   LI
Sbjct: 164 VVPRFAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALI 223

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +VA ++G +       +   V   VV+SI +++ ++   +  Y  +
Sbjct: 224 KAVIYGAIVAVVACQKGLSTKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMM 279


>gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [Mycobacterium vanbaalenii PYR-1]
 gi|119958970|gb|ABM15975.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 237

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 93/230 (40%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            + +    +++        + Q + +    +   +L++     ++A      L + GA  
Sbjct: 1   MSLDTFVKTFRRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAAD 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
            S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++ L+ 
Sbjct: 61  LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A      LL  L     + G  +       +    F +       L  +    IKA
Sbjct: 121 PRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLGELVLAEIKA 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                  G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 181 LLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAV 230


>gi|271964524|ref|YP_003338720.1| resistance to organic solvents ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270507699|gb|ACZ85977.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 269

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 104/249 (41%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +  S      +G +     E    ++  + +    I+Q +++       V+L+S   GA
Sbjct: 13  LVRRSTDVFGRVGDMSVIALEGFRRTWDVRTWFWEYIQQCWFLARVTSLPVLLVSLPLGA 72

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
            +A Q      Q GA   +   + +  +RE+  + +A++IAG  GSA+ ++IG+  I +E
Sbjct: 73  TVALQVGQLAWQLGASSATGGAVVVGLVREVAPMASALLIAGAGGSAMTSDIGARNIRDE 132

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           + A+  M ++ +  L++PR+WA      LL  L   +   G          +    +F  
Sbjct: 133 LAAMEVMAVNPIHRLVTPRLWAASTVAVLLVPLVIVAGAGGGYFFNVVIQGVTPGAYFDG 192

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             S    +++   L KA        I++   G         +G+ V    V +  +V  +
Sbjct: 193 AVSLLVTSDLLVTLFKAWIFGFIAAIMSCYFGMTCQTSPVGVGRAVNQSTVVTFMLVFAV 252

Query: 361 DSLFAIFYF 369
           + +  + YF
Sbjct: 253 NYVITMIYF 261


>gi|119717050|ref|YP_924015.1| hypothetical protein Noca_2826 [Nocardioides sp. JS614]
 gi|119537711|gb|ABL82328.1| protein of unknown function DUF140 [Nocardioides sp. JS614]
          Length = 257

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 110/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +     E     +     L   + Q +++    +   IL+S   GAVI+ Q      Q
Sbjct: 13  GEIAVMVVEVTKRMFTRPFQLREFVEQAWFITSVTLMPTILVSIPFGAVISLQVGNLTGQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +RE   +  A++IAG +GSAI +++G+ KI EEIDA+  +G+D +
Sbjct: 73  LGAQSFAGATAVLAVVREAAPIAAALIIAGAAGSAICSDMGARKIREEIDAMEVLGVDPL 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             LI PR+ A +    ++  +   + I G               F S F + A+L +++ 
Sbjct: 133 ERLIVPRVVATMFVALMINGIVIGAGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYI 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            +IKA        IV   +G   G   + +G+ V   V+ +  ++  ++++    YF +
Sbjct: 193 SMIKAVVFGWLAAIVGSYKGLNAGGGPSGVGRAVNESVIVAFMLLFFLNAVITAIYFQV 251


>gi|331699195|ref|YP_004335434.1| hypothetical protein Psed_5448 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953884|gb|AEA27581.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 280

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 107/268 (39%), Gaps = 10/268 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGV 168
           +    G +  + +     Q   LG  +S      A   +  + +   + R +  V     
Sbjct: 1   MSTAFGTRTRRALRGPLDQLAELGDQLSLYARAIAWIPRTVRRYRGEIARLLAEVSFGSG 60

Query: 169 PVVILI---------SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
            +++++         S   G+++  QG   L   G E  +  + +    R+I  L+ A  
Sbjct: 61  ALIVILGTAGVMAALSLFVGSLVGLQGFRALDSLGVEALTGFITAYFNTRDIAPLVAASA 120

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +    G+   A++G+M+I+EE+DA+  M +  V  L++ R+ A +I++  +  +   ++ 
Sbjct: 121 LTATLGAGFTAQLGAMRISEEVDALEVMAVPSVPFLVTTRVIAGMIAVIPMYTIGLLASF 180

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           + + + +     +P   +   F     ++++    +K    +  I ++    G+      
Sbjct: 181 VASRLNVTVVNGLPGGTYDHYFDLFLPVSDVLFSYLKVIVFSVVIILIHCHYGYRAKGGP 240

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +G  V   V  SI    ++D    + 
Sbjct: 241 AGVGVAVGRAVRLSIVSTAVLDFFLTLV 268


>gi|226304401|ref|YP_002764359.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183516|dbj|BAH31620.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 269

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   + Q  ++G       +L+    G  IA 
Sbjct: 16  ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 76  SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D +  L++PR+ A +I    L  +  F  +I   +       +P   F + F   
Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++    L+KA     A  +VA  +G         +   V   VV + ++V I++++ 
Sbjct: 196 GRSSDFVMALVKAAIFGLASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 256 SALYTVI 262


>gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS]
 gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 254

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 98/247 (39%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I    + A  +G  +  + +     ++        + Q + +    +   +L++     
Sbjct: 1   MIEQLAAPARAVGGFVDMSIDTFVKMFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTV 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EE
Sbjct: 61  LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D ++ L+ PR+ A      LL  L     + G  +       +    F + 
Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L  +    IKA       G+V    G  V      +G  V   VV +   + +I
Sbjct: 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI 240

Query: 361 DSLFAIF 367
           + +    
Sbjct: 241 NVIMTAV 247


>gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104]
 gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 254

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 97/247 (39%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            I      A  +G       +   ++++        + Q + +    +   +L+S     
Sbjct: 1   MIEQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTV 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++A      L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EE
Sbjct: 61  LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+R +G+D +  L+ PR+ A  +   LL  L     + G  +       +    F + 
Sbjct: 121 IDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
                 L  +    +KA       G+V    G  V      +G  V   VV +   + +I
Sbjct: 181 LTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240

Query: 361 DSLFAIF 367
           + +    
Sbjct: 241 NVVMTAI 247


>gi|125591222|gb|EAZ31572.1| hypothetical protein OsJ_15716 [Oryza sativa Japonica Group]
          Length = 322

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 91/236 (38%), Gaps = 23/236 (9%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+        +    +L+ Q+  VG     V +L +   G     Q   + ++ G
Sbjct: 99  ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSARVSLLTAAFVGMAFTIQFVREFTRLG 158

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  ++++   RE+                         ++E+ D +R +G   V  
Sbjct: 159 LHRSVDSVLALALSRELSP-----------------------VSEQTDTLRVLGAQPVDY 195

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A +++LP+LT+++    +  ++ +    + +  ++            ++ + L
Sbjct: 196 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 255

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +K+      I +V+   G      +  +G+  T+ VV S+  + + D   +  +F 
Sbjct: 256 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 311


>gi|54027606|ref|YP_121848.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54019114|dbj|BAD60484.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 108/282 (38%), Gaps = 8/282 (2%)

Query: 85  ISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCA 144
           +S T+   +     Q      +  +L   IG ++  F+    S    L            
Sbjct: 1   MSSTYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLT 60

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
                 G L+             + VV+++S   G  +  QG   L+  G    +  + +
Sbjct: 61  DVTWGNGNLVVG--------GGTIGVVVILSAFGGMTVGIQGHTSLNLLGLSPITGAISA 112

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
               RE+G LL ++  A ++G    A++G+M+I+EEIDA+ ++ +  +  L+S R++A I
Sbjct: 113 FATTRELGPLLASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPLPYLVSTRMFAAI 172

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           +++  L  L    A I  ++ +    D     +   F+      ++   L+KA       
Sbjct: 173 VAIVPLYCLGLAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAIT 232

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +    GF        +G      +   I +V+  D    +
Sbjct: 233 TFIQCYYGFFASGGPEGVGVAAGRAIKMCIILVVFADLFMTL 274


>gi|229494168|ref|ZP_04387931.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229318530|gb|EEN84388.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 269

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   + Q  ++G       +L+    G  IA 
Sbjct: 16  ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 76  SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D +  L++PR+ A +I    L  +  F  +I   +       +P   F + F   
Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++    L+KA     A  +VA  +G         +   V   VV + ++V I++++ 
Sbjct: 196 GRSSDFVMALVKAAVFGIASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 256 SALYTVI 262


>gi|117164592|emb|CAJ88138.1| putative ABC-transporter integral membrane protein [Streptomyces
           ambofaciens ATCC 23877]
          Length = 268

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 99/242 (40%), Gaps = 9/242 (3%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL---------ISFVTGAVIAQ 184
            ++               +L  + R +  V      + ++         ++  TG V+  
Sbjct: 14  QLLFYVRSLLWIPRTLHRYLREVQRLLAEVAFGTGGLGVVGGTIGVMIAMTLFTGTVVGL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           QG   L Q G   F+  + +    REI  L+  + ++   G+   A++G+M+INEE+DA+
Sbjct: 74  QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+  
Sbjct: 134 EGMGIRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFNLF 193

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
            +  ++   ++K    +  + +     G+        +G  V   V  +I ++ + D   
Sbjct: 194 LSPTDVLLSVLKVFIFSVMVIVAHCYYGYRASGGPAGVGTAVGRSVRNAIVLISVTDFFL 253

Query: 365 AI 366
           ++
Sbjct: 254 SL 255


>gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104]
 gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 272

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 110/262 (41%), Gaps = 1/262 (0%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            +   +  G   ++   D       +G + + + +     ++        + Q ++V   
Sbjct: 4   LRAERWSTGLPALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARV 63

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +   +L++     +++      L + GA   S    +   + ++G L+T +++AG   +
Sbjct: 64  SLAPTLLVAIPFTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGAT 123

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ A++GS  I EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +  
Sbjct: 124 AMCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFS 183

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKK 345
               D+    F +       +  +    IKA       G+VA   G +  G  + ++G  
Sbjct: 184 VFVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNA 243

Query: 346 VTTCVVQSISIVIIIDSLFAIF 367
           V   VV +   + +++ +    
Sbjct: 244 VNETVVYAFMSLFVVNVVVTAI 265


>gi|294632698|ref|ZP_06711257.1| ABC-transporter integral membrane protein [Streptomyces sp. e14]
 gi|292830479|gb|EFF88829.1| ABC-transporter integral membrane protein [Streptomyces sp. e14]
          Length = 268

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 102/244 (41%), Gaps = 10/244 (4%)

Query: 133 GLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVP---------VVILISFVTGAVI 182
           G  +           +  + +L  + R +  V               V+I ++  TG V+
Sbjct: 12  GERMIFYVRAVFWVPRTLRRYLKEVRRLLAEVAFGTGGLGVIGGTIGVMIGMTLFTGTVV 71

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             QG   L Q G   F+  + +    REI  L++ + ++   G+   A++G+M+INEE+D
Sbjct: 72  GLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVSGLALSATVGAGFTAQLGAMRINEEVD 131

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  MG+  +  L++ RI A ++++  L  +   S+ + +  V   +       +   F+
Sbjct: 132 ALEAMGIRSLPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRAVTVMFQGQSRGTYDHYFN 191

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
              +  ++   ++K    +  + I     G+        +G  V   V  +I ++ + D 
Sbjct: 192 LFLSPTDVLLSVLKVLIFSVIVIIAHCYHGYHAHGGPAGVGVAVGRSVRNAIVLIALTDF 251

Query: 363 LFAI 366
             ++
Sbjct: 252 FLSL 255


>gi|289642564|ref|ZP_06474707.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289507652|gb|EFD28608.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 285

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 2/260 (0%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             +G           +    LG              K + +   + RQ   + +S   ++
Sbjct: 18  VRVGGSTSDAYGGGQALVTDLGEAALFAVRAFRDIPKTRRYASEVFRQTGIIILSSSGII 77

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             +  +  A I+ +G + L Q GA  ++    ++     +   +   ++A + G  +VAE
Sbjct: 78  WFMMAMLAAEISLEGHYLLRQLGAGGYTAVFTAVSDYT-VAPEMWGWILAAKVGCGLVAE 136

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +GSM+I+EEIDA+  MGLD +  L+S R+ A+II  P + I       I   ++    + 
Sbjct: 137 LGSMRISEEIDALEVMGLDSMSYLVSARLLAVIIVTPFMFIAGTGIMYIVNYVLNVHVFH 196

Query: 292 -IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +    + S F +  T  ++   L+    M   I ++    G+        +GK     +
Sbjct: 197 SVTQGAYLSVFWTFLTQTDVLLSLVAGGIMGTMIVLIGCFYGYTASGGPVGVGKNTAKSM 256

Query: 351 VQSISIVIIIDSLFAIFYFA 370
           V ++ IV ++ ++F   +F 
Sbjct: 257 VINLIIVSVVGAIFQQLFFG 276


>gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551]
 gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
          Length = 237

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 94/230 (40%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            + +   ++++        + Q + V    +   +L+S     ++A      L + GA  
Sbjct: 1   MSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
            S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++ L+ 
Sbjct: 61  LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A  +   LL  L     + G          +    F +       L  +    IKA
Sbjct: 121 PRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKA 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                  G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 181 LLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230


>gi|169631674|ref|YP_001705323.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243641|emb|CAM64669.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 286

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 102/269 (37%), Gaps = 4/269 (1%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK--FKGFLLSLIRQ-MYYVG 164
                  G++I + I             I++         K  F+              G
Sbjct: 11  VQPIIDAGQRIAQSIRRLGHMLAFFVEAIASIPNALRYYSKEFFRLLADVTWGNGSLVTG 70

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
              V V  ++    GA+I  +    L+  G    +  + S++  RE+  ++ A+  A ++
Sbjct: 71  GGTVGVAAVLGATIGALIGIEAYNLLNIIGLGPATGFISSLVSTRELAPVMAALAFAMQA 130

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA-IIGAS 283
           G    A++G+ +INEEIDA+  + +  +  L++ R+ A  +++  L +L    + I    
Sbjct: 131 GCRFTAQLGAQRINEEIDALDALAIRPIPYLVTTRLLASTVAVVPLYLLCLVISYITCRL 190

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           +V           +   F    +  ++   +IKA         +    GF        +G
Sbjct: 191 LVGISSGGSIGGAYNHYFTMMLSGTDVVYSVIKAVVFVWIASTIQCYFGFNASGGPEGVG 250

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
                 +  +I++VII++ L  +  + + 
Sbjct: 251 VAAGHAMRAAITVVIIVNMLLTMALWGVD 279


>gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M]
 gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M]
          Length = 237

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 94/230 (40%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
            + +   ++++        + Q + V    +   +L+S     ++A      L + GA  
Sbjct: 1   MSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
            S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++ L+ 
Sbjct: 61  LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A  +   LL  L     + G          +    F +       L  +    IKA
Sbjct: 121 PRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKA 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                  G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 181 LLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230


>gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 110/257 (42%), Gaps = 15/257 (5%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VP 169
           V+ +     QA   G  I       +S  K        +R +  +G+           V 
Sbjct: 23  VRILKAIGHQADFFGKTIRLAPHAISSYKK------ETVRLIAEIGMGSGAMAIIGGTVV 76

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++   G ++A QG   L   G E  +    + + +R +  +++ + +A   G+   
Sbjct: 77  IVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAGAT 136

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+I+EEIDA+  MG+  +  L+S R+ A +IS+  L  +A   + + +       
Sbjct: 137 AQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTTYV 196

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y     V+   F +     ++F   ++A  MA  + ++    G+        +G+ V   
Sbjct: 197 YGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGVGEAVGRA 256

Query: 350 VVQSISIVIIIDSLFAI 366
           V  S+  V+ +  + ++
Sbjct: 257 VRTSLIAVVSVTLIASL 273


>gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 271

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 100/247 (40%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +   +   ++G           + +++       + Q +++        I++S     
Sbjct: 17  LRDQLQTPLTVIGGFFRMCVLTGRALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTV 76

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++       L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EE
Sbjct: 77  LLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 136

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +      ++    + + 
Sbjct: 137 IDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLAT 196

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +   L  +    +KA       G+V    G  V   S  LG  V   VV  +  +  +
Sbjct: 197 LTTITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAV 256

Query: 361 DSLFAIF 367
           + +    
Sbjct: 257 NVVLTTI 263


>gi|119386398|ref|YP_917453.1| hypothetical protein Pden_3690 [Paracoccus denitrificans PD1222]
 gi|119376993|gb|ABL71757.1| protein of unknown function DUF140 [Paracoccus denitrificans
           PD1222]
          Length = 252

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 3/248 (1%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
              +     + G V        A   +       L RQ+  +G   +PVV L +  TGA 
Sbjct: 8   GRAAIGLTRMTGQVTIFAARGLARVGQHP---AELARQVVQIGWLSLPVVGLTALFTGAA 64

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           +A Q      +F A      +++I   RE+G +L  +M+A R  SAI AE+G+M++ E+I
Sbjct: 65  LALQIHSGGERFQAGDVVPAIVAIGMARELGPVLGGLMVAARVASAIAAELGTMRVTEQI 124

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+ T+  D V  L+SPR+WA ++ +P+L  + +   I+G  ++         A++ S  
Sbjct: 125 DALVTLSTDPVGWLVSPRLWAALLCVPMLVGVGDVIGIMGGWLIGVNALGFNSAIYLSNS 184

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
            +     ++ +GL+K       + +     G      +  +G+  T  VV +   ++  +
Sbjct: 185 WAYLESWDVVSGLLKGAVFGLIVALSGCWFGMTAAGGAAGVGRATTNAVVAASVGILAAN 244

Query: 362 SLFAIFYF 369
                 +F
Sbjct: 245 FALTGLFF 252


>gi|148263953|ref|YP_001230659.1| hypothetical protein Gura_1896 [Geobacter uraniireducens Rf4]
 gi|146397453|gb|ABQ26086.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4]
          Length = 258

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 3/258 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G+ I+  I D      I+     N         +        ++Q+Y+ G+  + 
Sbjct: 1   MITALGRWIIYRILDLSDLVDIILQACINIPATIRYGRRP--VFTVFMKQVYFTGLEALK 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+++IS   G VI  Q    L   G EI +  ++  + +RE+G LLTA+++  RSG+AI 
Sbjct: 59  VIVVISLTIGVVIITQI-ISLVGAGNEILTGKVLIWVVIRELGPLLTAIVVIARSGTAIA 117

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G MKIN EI++I ++G+   + LI PRI+ +  ++ +LTI    ++I G  IV    
Sbjct: 118 TELGYMKINNEIESIESLGIPAGQYLIMPRIFGVTTAVMILTIYFEIASIFGGFIVASIG 177

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + +PF  F     ++ TL  +   + K+ F    +     K+G  VG  +  + +  T  
Sbjct: 178 WHVPFDRFSEGVFTSLTLKELGRSVAKSFFFGLFLSAACCKQGLGVGKSATQIPQAATKG 237

Query: 350 VVQSISIVIIIDSLFAIF 367
           V+QS+ +V ++D +  + 
Sbjct: 238 VMQSLFLVFLLDGIITVV 255


>gi|271964523|ref|YP_003338719.1| resistance to organic solvents ABC transporter permease
           [Streptosporangium roseum DSM 43021]
 gi|270507698|gb|ACZ85976.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 288

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 103/210 (49%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G   V V   ++F  GA +  QG   L   GAE F   + S   +REI  ++ AV +A 
Sbjct: 72  IGGGMVFVAFTMAFAVGATVGLQGYQGLQAIGAESFIGLVGSFANVREITPIIAAVALAA 131

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           + GS+  AE+G+M+I+EEIDA+  M ++    LI  R+ A +I+L  + ++A F++    
Sbjct: 132 QVGSSFTAELGAMRISEEIDALEVMAINAFTYLICTRVVAALIALVPVYLIALFASFFAT 191

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            ++    + +   V+   F+    L +I   +IK    A A+  +    GF        +
Sbjct: 192 RLMCTVLFGMSPGVYDYYFYLGLPLIDIVYSVIKVIVFAFAVISIHCYYGFNATGGPVGV 251

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
           G      + QSI  VI+++ L +  ++  G
Sbjct: 252 GTAAGRAIRQSIVTVILLNLLLSYLFWGNG 281


>gi|326330430|ref|ZP_08196738.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325951705|gb|EGD43737.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 287

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 108/253 (42%), Gaps = 2/253 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   +D  S    LG +     +   S    + +   ++RQ   + +    ++  +  + 
Sbjct: 27  MGGYSDGSSLIADLGGIALFGIQIVKSMPDVRHYGTEVLRQAGIIILKSTFIIWFMMCML 86

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
            A IA +  + L+Q GA  ++    S      +   +   +++ +    +VAE+GSM+I+
Sbjct: 87  AAEIALEAHYLLAQLGAGGYTAVFSSTADYT-VAPEMWGWILSAKVACGLVAELGSMRIS 145

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVF 297
           EEIDA+  MG+D    L++ R+ A++I  P + +       I    +    +  +    +
Sbjct: 146 EEIDALDVMGIDSRAYLVNTRVLAMVIVTPFMFVAGTGLMYILGYYMNVYLFHSVSAGGY 205

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
            S F S     ++   LI+A  M   I +V    GF        +GK     +V ++ IV
Sbjct: 206 LSVFWSFTAQQDLILSLIQATIMGLLIVLVGCYYGFNASGGPVGVGKATAKSMVINLVIV 265

Query: 358 IIIDSLFAIFYFA 370
             + ++F   +F 
Sbjct: 266 SALGAVFQQLFFG 278


>gi|326383821|ref|ZP_08205506.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326197585|gb|EGD54774.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 258

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 112/247 (45%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    H LG  +   G    +  +F+  L   + Q  ++G       +L+    G  IA 
Sbjct: 5   AVEAGHTLGFALQAIGSLFVAIARFRLSLSETLNQTVFIGRVSTGPSLLLMIPVGVFIAV 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 65  SVGELAGRIGAGGYSGAVVAFIIVGQASSLVCALMMAGVAGSAICTDLGSRKIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L++PRI A II   +L  L   + +    +       +P   F + F   
Sbjct: 125 EVMGVNILERLVAPRIAAAIIVALVLCSLITVTGVGACFLYHVYVQHLPAGSFMATFSQY 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             +++    L+K+   A    IVA  +G       + +   V   VV + ++V + +++ 
Sbjct: 185 GRMSDFVMALVKSSIFALLATIVACFKGLHARGGPSGVADAVNEAVVIAFALVFVFNTVL 244

Query: 365 AIFYFAI 371
           +  Y  +
Sbjct: 245 SQLYAVM 251


>gi|289645180|ref|ZP_06477195.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289505005|gb|EFD26088.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 283

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 2/260 (0%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
              G           S    LG +   T          + +   ++RQ   + +S   ++
Sbjct: 16  TEAGTGSFGSYTGEGSLIRDLGEIARFTVTSVRRMPGVRHYGSEVLRQAGIMILSSSGII 75

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             +  +  A  + +G + LSQ GA  ++    S      +   +   +++ +    +VAE
Sbjct: 76  WFMMGMLAAEASLEGHYLLSQLGAGSYTGVFTSTADYT-VAPEMWGWILSAKVACGLVAE 134

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +GSM+I+EEIDA+  MGLD    LIS R+ A+II  P + ++          ++    + 
Sbjct: 135 LGSMRISEEIDALEVMGLDPHSYLISTRLLAVIIITPFMFMIGTGIMYGVQYVLNVHVFH 194

Query: 292 -IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +    + S F +  T  ++   L     M   I  V    G+        +GK     +
Sbjct: 195 SVSAGGYLSVFWAFQTQQDVLLSLAMGAIMGMMIVTVGCYYGYTASGGPVGVGKNTAKSM 254

Query: 351 VQSISIVIIIDSLFAIFYFA 370
           V ++ IV ++ ++F   +F 
Sbjct: 255 VINLVIVSVVGAVFQQMFFG 274


>gi|326383822|ref|ZP_08205507.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197586|gb|EGD54775.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 286

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 106/260 (40%), Gaps = 10/260 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GV 165
           +     ++ + S     G  ++       +  +    +   +IRQ+  V         G 
Sbjct: 12  RGYRNRMDTAVSGLVRFGEYVTFVVRAVRAVPFTLIHYRKHVIRQIAEVTFGNKSLLSGG 71

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + +V+ +S    A++  +    L   G    S  L +I   RE+  ++ A+ +A + G
Sbjct: 72  GTIGIVLAMSLAAAAMLGIETYRGLQLVGMTSMSGMLAAIANTRELAPVVVAIALAAKVG 131

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A+IG+M+I++EI A+  M +  V  L + R+ A ++ +  + ++   ++ +   +V
Sbjct: 132 TGFTAQIGAMRISDEIAALDAMAIRSVPFLATTRMIAAMVCVLPIYMVGLLASYVATRLV 191

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           +  Y+      +   FH   T  ++     KA   A  + +V    G+        +G+ 
Sbjct: 192 VVWYHGESSGTYDYFFHLALTPTDLLYSATKAVVFAAIVTLVHCSYGYFASGGPEGVGQA 251

Query: 346 VTTCVVQSISIVIIIDSLFA 365
               +  SI  + + D +  
Sbjct: 252 AGRALRTSILSIGVFDVILT 271


>gi|326383099|ref|ZP_08204788.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198235|gb|EGD55420.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 246

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 95/230 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
            + +G  +S   E     ++        + Q + +    +   +L++     +++     
Sbjct: 1   MNGVGEFVSLAVESARELFRRPFQWRETVEQSWAIARVSLVPTLLVAIPFTVLVSFTLNI 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA+  S    ++  + +IG ++T +++AG   +AI A++G+  I EEIDA+  +G
Sbjct: 61  LLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREEIDALEVLG 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V  L+ PR+ A      LL  L     I G  I      D+    F +       L 
Sbjct: 121 INPVHRLVVPRVIASTGVALLLNSLVCTIGIAGGFIFSVYLQDVNPGAFIANLTLLTGLG 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +   +IKA       G+V    G  V   +  +G  V   VV S   + 
Sbjct: 181 ELVISMIKAALFGLFAGLVGCYRGLNVKGGAKGVGDAVNETVVYSFMALF 230


>gi|296141835|ref|YP_003649078.1| hypothetical protein Tpau_4170 [Tsukamurella paurometabola DSM
           20162]
 gi|296029969|gb|ADG80739.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 113/275 (41%), Gaps = 3/275 (1%)

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155
                +   +  +    +I +  +  +      A +     +      + + + +  +  
Sbjct: 7   PTEAPARRPSDLRIFLDNIDRNALGPLRTLGRTAQL---ATTTVMAAISDTIRGRLAVKE 63

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
            + Q +++         L++   G ++  Q    + Q GAE        +  +++   L 
Sbjct: 64  TVIQAWFLVSVTAVPAFLMAIPFGVIVTIQVGGVVQQIGAESLLGAASGLAVIQQAAPLA 123

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             +++ G   SAI A++G+  I +E+DA+RTMG+D V  L++PR+ A ++  PLL +   
Sbjct: 124 AGLLLGGAGASAIAADLGARTIRDEVDALRTMGIDPVHRLVAPRLIAAVVVAPLLNLFIV 183

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
              I+ A  V     D+    ++  F + AT+ ++   ++KA      I IV  + G   
Sbjct: 184 VVGILAAFYVAVLGQDVTPGSYWLSFGAYATVRDLGFSMVKAALFGAIIAIVGCQHGLEA 243

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              +  +   V   VV S   +I+++      Y  
Sbjct: 244 KGGARGVADAVNATVVVSTVAIIVLNFALTQAYTV 278


>gi|254441414|ref|ZP_05054907.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198251492|gb|EDY75807.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 551

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 2/190 (1%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
                          IG      +          GL +S          +F+  L +L+ 
Sbjct: 10  PAPVVAGGLIEWVADIGSSTTNAVKFVLKLIGYFGLFLSRLARSIRHPKEFR--LTALVH 67

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               VG+  VP+V L++F+ G V+A QG+ QL QFGAE+F +DL+++  LRE+G+LLT++
Sbjct: 68  HCQEVGLKAVPIVALMAFLIGVVLAFQGSTQLKQFGAEVFVVDLIAVYILRELGILLTSI 127

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           ++AGR+ SA  A IGSMK+ EEIDA+R++GLD   IL  PRI AL++ LP+L ++AN   
Sbjct: 128 IVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPATILFVPRILALVLMLPILGLVANVMG 187

Query: 279 IIGASIVIWK 288
           + G  +    
Sbjct: 188 LFGDPMAAQV 197


>gi|169628106|ref|YP_001701755.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240073|emb|CAM61101.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 109/267 (40%), Gaps = 10/267 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GV 165
           +  V   N        LG +++      A      + +    +R +  +         G 
Sbjct: 12  RPFVGIYNRVQKPVTRLGHMVAFFFRAIAGVPIVLRHYWKEFLRHLSDIAWGNGSLVVGG 71

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
               V+I++  + G ++A +G   L   G    +  + S++  RE+  ++ A+  A ++G
Sbjct: 72  GTAGVMIVLGVIAGGLVAIEGYNFLDLLGLGPATGIISSLVNTRELAPIMAAIAFATQAG 131

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++G+M+I+EEIDA+ ++ +  +  L++ R+ A I+    L +     + +   ++
Sbjct: 132 CRFTAQLGAMRISEEIDAMDSIAIRPIPYLVTTRLMAAIVVTIPLYVACLAVSYLSCQVM 191

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           +          +   F    +  +I   +IKA         +    GF        +G  
Sbjct: 192 VGIMSGGSIGSYLHYFGIGVSGIDIVYSVIKAIIFVWIASTIQCYYGFYASGGPEGVGVA 251

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372
               +  +I++VIII+ L  +  +++ 
Sbjct: 252 AGHAMRAAITLVIIINMLLTMALWSVD 278


>gi|120401972|ref|YP_951801.1| hypothetical protein Mvan_0957 [Mycobacterium vanbaalenii PYR-1]
 gi|119954790|gb|ABM11795.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 106/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +  +      IRQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 40  VRTVQYFLLDLFSGRFQWQEFIRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 99

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L  A+++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 100 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 159

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   + + +    + +     F + F S AT  ++   L+
Sbjct: 160 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV 219

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +V+ ++G A       +   V   VV+SI ++++++   +  Y  +
Sbjct: 220 KAVIFGAIVAVVSCQKGLATQGGPTGVANSVNAAVVESILLLMVVNVAISQLYIMM 275


>gi|262201470|ref|YP_003272678.1| hypothetical protein Gbro_1508 [Gordonia bronchialis DSM 43247]
 gi|262084817|gb|ACY20785.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 286

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 100/253 (39%), Gaps = 10/253 (3%)

Query: 123 NDSCSQAHILGLVISNTGEFC-ASSYKFKGFLLSLIRQMYYV---------GVSGVPVVI 172
                    +G  ++       A  +    +   ++ Q+  V         G   + +V+
Sbjct: 19  QQLTGGIVRIGEFVTFIARAIIAIPFTVVHYRKHVLNQIAEVTFGSKSLLSGGGTLGIVL 78

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            +S     ++  +    L   G    S  L +I   RE+  ++  + +A + G+   A++
Sbjct: 79  AMSLAAAMMLGVETYRGLQLVGMTSLSGMLSAIANSRELAPVVVGIALAAKVGTGFTAQV 138

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+I++EI A+ +M +  +  L + R+ A ++ +  + ++   ++ I   +V+  Y   
Sbjct: 139 GAMRISDEIAALDSMAIRSIPFLATTRMIAAMVCILPIYMVGLLASYIATRLVVVWYNGE 198

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   FH   T  ++     KA   A  + +V    G+        +G+     +  
Sbjct: 199 SSGTYDYFFHLALTPTDLLYSATKAIVFAAIVALVHCSYGYFASGGPEGVGQAAGRALRT 258

Query: 353 SISIVIIIDSLFA 365
           SI  + I D +F 
Sbjct: 259 SILAIGIFDVIFT 271


>gi|296165200|ref|ZP_06847747.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899389|gb|EFG78848.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 287

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 103/254 (40%), Gaps = 6/254 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178
                H+L   +        +  +++G  L L+  +        VG     V +++    
Sbjct: 27  IIRLGHLLVFFVRALAAVPLALRQYRGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGVTV 86

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L+  G    +  + S++  RE+  L+ ++  A + G    A++GSM+I 
Sbjct: 87  GALVGIEGYNFLNLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 146

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A ++++  L         +   +V+          + 
Sbjct: 147 EEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAIGYLSTQLVVGIGSGGSTGSYL 206

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       +I   LIKA         +    G+        +G      +  SI++VI
Sbjct: 207 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 266

Query: 359 IIDSLFAIFYFAIG 372
           I++ L  +  + + 
Sbjct: 267 IVNMLLTMALWGVD 280


>gi|262203811|ref|YP_003275019.1| hypothetical protein Gbro_3952 [Gordonia bronchialis DSM 43247]
 gi|262087158|gb|ACY23126.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 254

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 96/238 (40%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
            +    +    +G  ++   +     +         + Q + +    +   +L++     
Sbjct: 1   MLGKLATPLGGIGDFVALGVDSARELFHRPFQWRETVEQSWAIARVSMVPTLLVAIPFTV 60

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           +++      L + GA+  S    ++  + +IG ++T +++AG   +AI A++G+  I EE
Sbjct: 61  LVSFTLNILLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREE 120

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA++ +G++ +  L+ PRI A      LL  L     I G  +      D+    F + 
Sbjct: 121 IDAMKVLGINPIHRLVVPRIIASTGVAVLLNSLVCTIGIGGGFVFSVYLQDVNPGAFIAN 180

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                    +   ++KA       G+V   +G  V   +  +G  V   VV S   + 
Sbjct: 181 LTLLTGFGELMISMVKAALFGLFAGMVGCYQGLNVKGGAKGVGDAVNETVVYSFMALF 238


>gi|189425024|ref|YP_001952201.1| hypothetical protein Glov_1965 [Geobacter lovleyi SZ]
 gi|189421283|gb|ACD95681.1| protein of unknown function DUF140 [Geobacter lovleyi SZ]
          Length = 270

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 3/264 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               IG  +++      +   ++   + +     +         + L++Q+Y+ G+    
Sbjct: 9   FPERIGAFVLRRGQFFVTITRLILQSLVSLISPPSLGN--PAIRMVLLKQLYFTGLEAAK 66

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +++L++ + G VI  Q    L   G       ++  +   E+G LLTA+++  RSG+AI 
Sbjct: 67  IIVLVAVILGTVIVSQV-IGLVGGGNGSLIGKVLVWVVFLELGPLLTAMIVIARSGTAIA 125

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           AE+G+MKIN EI A+  +G+D  R L+ PR+     S+ LLTI    ++ +G  +++   
Sbjct: 126 AELGAMKINGEIAALERLGIDPERYLLLPRVIGAATSVMLLTIYFVLTSFVGGFLIVSFG 185

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + I +  F     ++  +  +   + KA      I ++    G +VG  +  + +  T  
Sbjct: 186 HHISYDQFIQGIVASLGIREVVVLMAKAAAFGLIIPLICCNAGMSVGTSATEIPQAATRA 245

Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373
           V+ S+  + ++D +       + +
Sbjct: 246 VITSLFSIFVLDGVITYLASLLAV 269


>gi|324997538|ref|ZP_08118650.1| hypothetical protein PseP1_02178 [Pseudonocardia sp. P1]
          Length = 246

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 8/245 (3%)

Query: 128 QAHILGLVISNTGEF-CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
            A +LG V+ +            +  L  +++  ++      P+ +            Q 
Sbjct: 1   MAELLGRVVYSAVRHPVGYWGDVRDQLFEVLKLCWF------PMAVACVAFGFGAPGLQA 54

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                 FG          +  +RE    + A+++AG  G+A+ A++G+ +I EEIDA+  
Sbjct: 55  GNLFILFGIPERLGSFFVMASVREFAPWINAMVVAGVVGTAMTADLGARRIREEIDAMEV 114

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +G+D VR LI PRI A+ I   L+ ++A    ++G  +      D   A F   F S AT
Sbjct: 115 LGIDPVRALILPRIIAVTIMTGLMDLIALSFGVLGGYLAA-IQLDAGSAAFQQNFFSNAT 173

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             +++  ++K       IG+V   +GF        +G+ V   VV + + +   + +F  
Sbjct: 174 TIDLWGSVLKTTLFGLIIGVVCCYKGFRAQGGPAGVGRAVNQAVVIAFAAIWSFNFVFTT 233

Query: 367 FYFAI 371
               +
Sbjct: 234 ILLGL 238


>gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M]
 gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A
           [Mycobacterium marinum M]
          Length = 267

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 1/259 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
           +    G  ++ ++ D       ++G           + ++       LI Q ++V    +
Sbjct: 1   MTTSSGPHLMGYLRDQLETPLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVAL 60

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
              I++S     ++       L+QFGA   S    +I  + ++G L T +++AG   +AI
Sbjct: 61  LPTIMVSIPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAI 120

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G+  I EEIDA+  +G+D +  L+ PR+ A      LL  L     ++G  +    
Sbjct: 121 CADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVY 180

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
             +I    + +   +   +  +   ++KA       G+V    G  V   S  LG  V  
Sbjct: 181 LQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE 240

Query: 349 CVVQSISIVIIIDSLFAIF 367
            VV  +  +  ++ +    
Sbjct: 241 TVVLCVVALYAVNVILTTI 259


>gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99]
 gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A
           [Mycobacterium ulcerans Agy99]
          Length = 267

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 101/247 (40%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180
             +   +   ++G           + ++       LI Q ++V    +   I++S     
Sbjct: 13  LRDQLETSLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIMVSIPLTV 72

Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240
           ++       L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EE
Sbjct: 73  LLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 132

Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300
           IDA+  +G+D +  L+ PR+ A      LL  L     ++G  +      +I    + + 
Sbjct: 133 IDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNINGGAYLAT 192

Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360
             +   +  +   ++KA       G+V    G  V   S  LG  V   VV  +  +  +
Sbjct: 193 LTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAV 252

Query: 361 DSLFAIF 367
           + +    
Sbjct: 253 NVILTTI 259


>gi|325673338|ref|ZP_08153030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325555928|gb|EGD25598.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 269

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   ++Q  ++G       +L+    G  +A 
Sbjct: 16  ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 75

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 76  SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D V  L++PR+ A ++    L  +  F  ++   +       +P   F + F   
Sbjct: 136 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 195

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              A+    L+KA   A    +VA  +G         +   V   VV + ++V ++++  
Sbjct: 196 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 255

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 256 SALYTVI 262


>gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC
           12478]
          Length = 268

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 99/237 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G           + ++        I Q +++    +   IL+S     ++      
Sbjct: 22  LTLVGGFFRMCVLTGKALFRRPFQWREFILQCWFIMRVALLPAILVSVPFTVLLIFTLNV 81

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+QFGA   S    +I  + ++G  +T +++AG   +AI A++G+  I EEIDA+  +G
Sbjct: 82  LLAQFGAADLSGAGAAIGAVTQLGPQVTVLVVAGAGSTAICADLGARTIREEIDAMEVLG 141

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   +   L 
Sbjct: 142 IDPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLP 201

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
            +   ++KA       G+V    G  V   S  LG  V   VV  +  +  ++ +  
Sbjct: 202 EVVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALFAVNVVLT 258


>gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [Mycobacterium sp. MCS]
 gi|119867593|ref|YP_937545.1| hypothetical protein Mkms_1545 [Mycobacterium sp. KMS]
 gi|108768911|gb|ABG07633.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119693682|gb|ABL90755.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 271

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 106/239 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   +   +   +  +        + Q ++V    +   ++++     ++      
Sbjct: 27  IRALGGFFAMALDTLVTIPRRPFAWREFLEQSWFVARVSLVPTLMLAIPFTVLLIFTFNI 86

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  F+    +   + +IG ++T +++AG   +A+ A++G+  I +E+DA+R MG
Sbjct: 87  LLLEFGAADFAGTGAAYGTVTQIGPVVTVLVVAGAGATAMCADLGARTIRDELDALRVMG 146

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D ++ L+ PR+ A  +   LL+ +     ++G          +    F S      + A
Sbjct: 147 VDPIQTLVVPRVLAATVVATLLSSVVILVGLVGGFAFSVFVQHVTPGAFISGLTVITSAA 206

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   LIKA     A G++A  +G +VG     +G  V   VV +   +  I+ + +  
Sbjct: 207 DVVISLIKAALFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFVALFAINIIASAV 265


>gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS]
 gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 20/278 (7%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
                   H     V       +QA      +    E               +R +  +G
Sbjct: 7   GPRFPGLTHRLDGWVAGWRRIGAQARFYAKTLGAMWEALVYYR------GETLRMIAQMG 60

Query: 165 VSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +           V +V  ++   G+++  QG   LS  G E  +  + + +  R +  L 
Sbjct: 61  LGAGALAMIGGTVGIVGFLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLT 120

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
             + ++   G+   A++G+M+INEEIDA+  MG+  V  L S R+ A +I +  L  +A 
Sbjct: 121 AVISLSATIGAGTTAQLGAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAV 180

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           + + + A      YY     ++   F +    ++I   L +A  M   + +V    GF  
Sbjct: 181 WMSFMSARFATTVYYGQATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTA 240

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
                 +G+ V   V  S+       ++F I + ++ I
Sbjct: 241 SGGPAGVGEAVGRAVRTSLIA-----AVFVILFASLAI 273


>gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 271

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 1/256 (0%)

Query: 113 HIGKKIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
             G  +V ++ D       ++G           + +++       + Q +++        
Sbjct: 8   RRGPYLVGYLRDQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPT 67

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           I++S     ++       L+QFGA   S    +I  + ++G L T +++AG   +AI A+
Sbjct: 68  IMVSIPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICAD 127

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  +      +
Sbjct: 128 LGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQN 187

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    + +   +   L  +    +KA       G+V    G  V   S  LG  V   VV
Sbjct: 188 VSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVV 247

Query: 352 QSISIVIIIDSLFAIF 367
             +  +  ++ +    
Sbjct: 248 LCVVALYAVNVVLTTI 263


>gi|169631592|ref|YP_001705241.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243559|emb|CAM64587.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 107/236 (45%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F    +  +      +RQ  +   + V  VIL++   G  ++ Q A    Q GA
Sbjct: 44  VRTLQWFFVDLFTGQFQWQEFVRQGAFQAATAVMPVILVTLPIGVTLSIQFALLAGQVGA 103

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     I  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 104 TSLAGAASGIAIIRQAASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   +GA +    +       F S F S AT  ++   ++
Sbjct: 164 VVPRFAAAIMIAVALTAVVCFVGFLGAYLFNVYWQGGAPGSFVSTFASFATPDDMVLAVL 223

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +V+ ++G +       +   V   VV+SI ++++++   +  Y  +
Sbjct: 224 KAIIYGAIVAVVSCQKGLSTKGGPIGVANSVNAAVVESILLLMVVNVAISQLYIMM 279


>gi|226361226|ref|YP_002779004.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239711|dbj|BAH50059.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 291

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 102/265 (38%), Gaps = 7/265 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-----QMY 161
                  +G+     I +           ++   +      K     ++ +       + 
Sbjct: 16  LLQPIRSVGRAATSVIEEIGQVTVFSVKTVALLPKTLRHYRKQTMTTMNNMAWGNGSLVV 75

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             GV  +  +  +    GAV+A Q        G    +  + S   +R I  ++T +  A
Sbjct: 76  DGGVVSL--MFFLGLAVGAVVAIQAFMAFDLLGFGALTGIIGSFGNVRVIAPIITGIGFA 133

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
            ++G  + AEIGSM+I+EEIDA  +MGL  +  ++  R+   ++ +    ++A   +   
Sbjct: 134 AQAGCRMTAEIGSMRISEEIDATESMGLQAIPFVVGTRLIGSMLIVIPGYLMALVVSFFT 193

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
             ++I  ++  P   +   F    ++ ++   L+KA      + ++    G+        
Sbjct: 194 GGLIIKTFHRQPSGTYDHYFSQFLSVPDLMASLLKAVVFCAVVTMIHCYYGYFADGGPAG 253

Query: 342 LGKKVTTCVVQSISIVIIIDSLFAI 366
           +G      +  S+  +++++    +
Sbjct: 254 VGAASGRAIRASLVAIVVLNFCMTV 278


>gi|111023083|ref|YP_706055.1| ABC transporter membrane protein [Rhodococcus jostii RHA1]
 gi|110822613|gb|ABG97897.1| possible ABC transporter integral membrane protein [Rhodococcus
           jostii RHA1]
          Length = 269

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 104/242 (42%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G  I+ T        + K     L+ Q + +        +L+    G +IA      
Sbjct: 21  ALIGFSIATTVAAVRVLVRRKLAWRELLDQAWRLASVTSAPALLLMIPIGVLIAVTIGSL 80

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
             Q GAE ++  ++  + + +   L+ A+M+AG  GSAI A++GS  I EE++A+  +GL
Sbjct: 81  AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           + +  L+ PR+ A +I    L  +     +    +      +     F +       L++
Sbjct: 141 NVIERLVVPRVLAAVIVGIALCAMVTAVGVSACFLFQVIVQNSSAGSFLTALSQYTRLSD 200

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               L+K+   A    +VA  +G       + +   V   VV +  +V I++++ +  Y 
Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260

Query: 370 AI 371
            +
Sbjct: 261 VL 262


>gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639 [Mycobacterium intracellulare ATCC
           13950]
          Length = 237

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 94/230 (40%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
              +   ++++        + Q + +    +   +L+S     ++A      L + GA  
Sbjct: 1   MMMDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
            S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G+D ++ L+ 
Sbjct: 61  LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR+ A  +   LL  L     + G  +       +    F +       L  +    +KA
Sbjct: 121 PRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKA 180

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                  G+V    G  V      +G  V   VV +   + +I+ +    
Sbjct: 181 LLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230


>gi|54024947|ref|YP_119189.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54016455|dbj|BAD57825.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 7/283 (2%)

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF----CASSYKFKGFL 153
                      +        ++       S     G  +           A     +  L
Sbjct: 4   EYAPAAVWPPDSTDEQRASAVLVLRGRILSAVRTFGRTVRLGVRATVLAVADLAAGRFPL 63

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
              + Q ++     +   ILIS   G VIA Q        GA   +  +  +  +++I  
Sbjct: 64  REAVVQAWFFASVSLLPAILISLPMGVVIAVQVGSLTENVGAGSMAGAVGGMGVMQQIAP 123

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           L  A+++ G   SAI +++G+  I EEIDA+RTMG+D  R L++PR+ A+ +  P+L +L
Sbjct: 124 LAAALLVGGAGASAIASDLGARTIREEIDALRTMGIDPHRRLVAPRVVAMTVVAPMLAVL 183

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
               +I+ + +V      +    ++  F S A++ ++   L K+      + ++A + G 
Sbjct: 184 VILMSILASFLVASVGQGVAPGSYWLSFGSFASVTDLVICLGKSAVFGYLVAVIASQRGL 243

Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA---IFYFAIGI 373
                   +   V   VV  +   ++++ +     + +  +G+
Sbjct: 244 QAQGGPKGVADCVNAAVVLGLLACLVVNLIITQIVLLFVPMGL 286


>gi|193215869|ref|YP_001997068.1| hypothetical protein Ctha_2170 [Chloroherpeton thalassium ATCC
           35110]
 gi|193089346|gb|ACF14621.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC
           35110]
          Length = 264

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 3/247 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
               +G+ +   +    +       VI++  +F   +       L L+RQ+ + G   + 
Sbjct: 7   FLEQLGQNVRSSLRAYITFLSFAAAVIASFPKFFKQTQ---VGYLVLLRQVLFTGYEALS 63

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V+LIS   G +I  +G   L+ FG       ++  +  RE+  LLTA +I  RSG+AI 
Sbjct: 64  IVVLISVSIGGLIILEGYSILANFGQSDLLYVILVSVITRELSNLLTAFIIVARSGTAIA 123

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G+M +N EIDA+ ++G+  +  L+ PR   +++SL +L +  N + I+G  +V   +
Sbjct: 124 TELGNMVVNHEIDALLSIGISPISYLVVPRTIGVVVSLLVLNVYFNITGILGGWMVSNWF 183

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y I F VFFS+  +  TL +I   ++K+     AI I++   G  V   S  + ++    
Sbjct: 184 YPIDFNVFFSKLLAKLTLVDISASILKSMLFGFAIAIISSFHGLQVNFASTEVPQRTIRA 243

Query: 350 VVQSISI 356
           VV S+++
Sbjct: 244 VVYSLTM 250


>gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 260

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++   D       +G + + + +     ++        + Q ++V    +   +L++  
Sbjct: 3   ALRLKVDMSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
              +++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I
Sbjct: 63  FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +      D+    F
Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356
            +       +  +    IKA       G+VA   G +  G  + ++G  V   VV +   
Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242

Query: 357 VIIIDSLFAIF 367
           + +++ +    
Sbjct: 243 LFVVNVVVTAI 253


>gi|317508278|ref|ZP_07965958.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253453|gb|EFV12843.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 290

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 101/279 (36%), Gaps = 3/279 (1%)

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKG 151
           +                    +    + F           GLV+        +  +  + 
Sbjct: 1   MTAPARYYPPIVAPLVRGVKAVVGIPLGFFERMGHVLTFFGLVLGAVPHTFRAYGRQIRE 60

Query: 152 FLLSLI--RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            L+ L        VG   + V+ ++    G VI  +    LS       +  + +    R
Sbjct: 61  TLIDLTWGNGRIIVGGGTLSVLAVLGLSIGGVIGLEAYNALSIVNLGPLTGFISAYGMTR 120

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E G L  A+  A ++G  I AE+G+M+I EEIDA+   G+  +  +++ R+ A I  +  
Sbjct: 121 EFGPLAAALGFAAQAGCRITAEVGAMRIAEEIDALEATGIRSIPFVVTTRVIAGIAVILP 180

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           + +L         S+V+    +     +   F       ++   LIK       + IV  
Sbjct: 181 VYLLTLILGYEACSLVVNLLNNQSAGTYNYYFMRFLVPQDVVLSLIKTAIFIVVVVIVHG 240

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +G+        +G      +  SI IV+I++ L  + +
Sbjct: 241 YQGYYASGGPEGVGLASGRAIRSSIVIVVILNMLLTLLF 279


>gi|319952306|ref|YP_004163573.1| hypothetical protein Celal_0740 [Cellulophaga algicola DSM 14237]
 gi|319420966|gb|ADV48075.1| protein of unknown function DUF140 [Cellulophaga algicola DSM
           14237]
          Length = 245

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 2/246 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G       E      K++     +++++  +    + ++I ISF  G V+A Q
Sbjct: 1   MNYLASIGSYFIMIREVFKKPTKWRIMKSLILKEIDELIYGSLGIIIFISFFIGGVVAIQ 60

Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            A  ++                 + E     T++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TALNMTNPLIPRNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  L+ P+I AL++  P    +A +  I G  I          A F       
Sbjct: 121 EVMGVNSLNYLVFPKIVALLL-YPFAIAIAMYVGIFGGWIAGVFGGFSTSADFVEGIQLD 179

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++    IK    A  I  +    GF +   +  +GK  TT  V +  ++II++ + 
Sbjct: 180 FIPFHVTYSFIKTIIFAFIIATIPSFHGFYMKGGALEVGKASTTSFVWTSVVIIIVNYVL 239

Query: 365 AIFYFA 370
                 
Sbjct: 240 TQLLLG 245


>gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 260

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
            ++   D       +G + + + +     ++        + Q ++V    +   +L++  
Sbjct: 3   ALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
              +++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I
Sbjct: 63  FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
            EEIDA+  +G++ ++ L++PR+ A  +   LL  L     ++G  +      D+    F
Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356
            +       +  +    IKA       G+VA   G +  G  + ++G  V   VV +   
Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242

Query: 357 VIIIDSLFAIF 367
           + +++ +    
Sbjct: 243 LFVVNVVVTAI 253


>gi|261415551|ref|YP_003249234.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372007|gb|ACX74752.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 292

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%)

Query: 99  QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158
           +          L + +G  I+K          ++ L +         S+ FK    ++I 
Sbjct: 7   KNWQKMTPVGRLFHTLGIFILK-----TRMGQLIALFLRTVASLFDKSHNFKSDSRNIIL 61

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
           Q ++ GV   P +  ++ + G V+       + + G       L+ ++ +RE+  + TA 
Sbjct: 62  QTFFTGVEIFPPLFAVATLFGTVVIIYLFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAF 121

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +IAGR+GS++   IGSM IN E+DA+ TMG++ +R L+ P +    I++ ++ I+ + SA
Sbjct: 122 LIAGRTGSSLTTYIGSMVINSEVDALATMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSA 181

Query: 279 IIGASIVIWKYY---------DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           I    ++               I ++   +      T  +    ++K       I I A 
Sbjct: 182 IGAGFLLTKGIIFITGNAPNVQITWSYLSTEIIKALTKPDFVFAIVKPLIFGIIITINAC 241

Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            +   +      + K  +  V+ S   ++  D+LF +++
Sbjct: 242 YQALNIKRDIRQVPKATSRSVIMSFLYIVFTDALFLMYF 280


>gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [Mycobacterium sp. MCS]
 gi|119869778|ref|YP_939730.1| hypothetical protein Mkms_3746 [Mycobacterium sp. KMS]
 gi|108771058|gb|ABG09780.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119695867|gb|ABL92940.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 270

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 1/245 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + +       +G + + + +   + ++        + Q ++V    +   +L++     +
Sbjct: 17  VKNLAGPMAAVGGLFAMSADAIRNVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEI
Sbjct: 77  VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  +G+D V+ L++PR+ A  +   LL  L     I+G         D+    F +  
Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360
                +  +    +KA       G+VA   G  V G  + ++G  V   VV +   +  I
Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256

Query: 361 DSLFA 365
           + L  
Sbjct: 257 NVLVT 261


>gi|183983838|ref|YP_001852129.1| integral ABC-type transport protein [Mycobacterium marinum M]
 gi|183177164|gb|ACC42274.1| conserved hypothetical integral ABC-type transport protein
           [Mycobacterium marinum M]
          Length = 287

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 110/274 (40%), Gaps = 10/274 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQM---- 160
                I +++V+    +      LG ++       A       +++G  L L+  +    
Sbjct: 7   RPLAPITEQVVRLYRRTTKPIIRLGHMLVFFFRALAGVPIAVRQYRGEFLRLLSNITWGN 66

Query: 161 --YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218
               VG     V +++    GA++  +G   L   G    +  + S++  RE+  L+ ++
Sbjct: 67  GSIVVGGGTAGVAVVLGMTVGALLGIEGYNFLDLLGLGPATGLISSLVNTRELAPLMASL 126

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
             A ++G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A I+++  L        
Sbjct: 127 AFAMQAGCRFTAQLGSMRIAEEIDAMESIAIRPIPFLVTTRLVASIVAMIPLYAACLAIG 186

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
            +   +V+          +   F       +IF  L+K          +    GF     
Sbjct: 187 YLTTQVVVGISSGGSTGSYLHYFSLMLAGQDIFYSLLKTVIFVWIASTIQCYYGFYASGG 246

Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
              +G      +  SI++VI+++ L  +  + + 
Sbjct: 247 PEGVGVAAGHGMRASITVVIMVNMLITMALWGVD 280


>gi|41407948|ref|NP_960784.1| hypothetical protein MAP1850 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118466872|ref|YP_881589.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
 gi|254775058|ref|ZP_05216574.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|41396302|gb|AAS04167.1| hypothetical protein MAP_1850 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118168159|gb|ABK69056.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 287

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 102/275 (37%), Gaps = 1/275 (0%)

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157
              +        L+      +++  +        L  V     ++     +    +    
Sbjct: 7   QPFAPISVPLARLYRRGKVPVIRLGHLLVFFVRALVAVPLALRQYSGEFLRLLSNITWGN 66

Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
             +   G +   V +++    GA++  +G   L   G    +  + S++  RE+  L+ +
Sbjct: 67  GSIVVGGGTA-GVAVVLGMTVGALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMAS 125

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           +  A + G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A ++++  L       
Sbjct: 126 LAFAMQGGCRFTAQLGSMRIAEEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAI 185

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
             +   IV+          +   F       +I   L KA         +    G+    
Sbjct: 186 GYLSTQIVVSIGSGGSTGSYLHYFTLMLAGQDIVYSLFKAVVFVWIASTIQCYYGYYASG 245

Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
               +G      +  SI++VII++ L  +  + + 
Sbjct: 246 GPEGVGVAAGHGMRASITVVIIVNMLLTMALWGVD 280


>gi|326382400|ref|ZP_08204092.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326199130|gb|EGD56312.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 268

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 96/205 (46%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           VG     V++++    GA I  QG   L   G    +  + S    RE+  ++ A+  A 
Sbjct: 52  VGGGTAVVLVILGMAVGASIGIQGYASLDLVGMGSLTGFISSYANTRELAPMIAAIGFAA 111

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           ++G  + AEIGSM+I EEIDA+ +M +  +  ++S R+ A I ++  L I+    + + A
Sbjct: 112 QAGCRLTAEIGSMRIAEEIDALESMAVRPIPYVVSTRVVAAITTIIPLYIVTLILSFVAA 171

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +V+   +      +   F++     ++   +IK      ++ IV   +GF     +  +
Sbjct: 172 KLVVILMHGQSGGTYDFYFNAFLKPQDLVFSVIKVLIFVVSVVIVHSYQGFYATGGAEGV 231

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367
           G+     +  S+ ++++ D +  + 
Sbjct: 232 GRASGRAIRSSLIVIVVEDMILTLL 256


>gi|262202880|ref|YP_003274088.1| hypothetical protein Gbro_2987 [Gordonia bronchialis DSM 43247]
 gi|262086227|gb|ACY22195.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 288

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 96/263 (36%), Gaps = 10/263 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166
           +               +G +I+      +S    F+ +   + R +  V           
Sbjct: 15  EAAKGLYRGPRDALAAMGHLITFLVRSISSVPLAFRHYSKEVWRLLADVAWGNGAIVVGG 74

Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V++++  + GA +  +    L+  G    +  L +    REI  LL A     +SG
Sbjct: 75  GTVGVMVILGIMGGATVGIEAYTALNLLGMAPVTGGLSAFATTREIAPLLAATAFTAQSG 134

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++GSM+I EEIDA+  + +  +  L++ R+ A ++++  L  ++  +  I   ++
Sbjct: 135 CRFTAQLGSMRIAEEIDALEAIAIRPLPYLVTTRMLAAVLAIVPLYSVSLAANYIACQVM 194

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                      +   F       ++    IK          +    G+        +G  
Sbjct: 195 FQFQSGQGAGTYLYYFTQFLVSWDVVFSFIKVIIFVLLTTFIQCYYGYFASGGPEGVGVA 254

Query: 346 VTTCVVQSISIVIIIDSLFAIFY 368
               +  +I +++  + +  + +
Sbjct: 255 AGHAIRLAIIVIVFANLVMTLVF 277


>gi|120401973|ref|YP_951802.1| hypothetical protein Mvan_0958 [Mycobacterium vanbaalenii PYR-1]
 gi|119954791|gb|ABM11796.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 285

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 107/265 (40%), Gaps = 10/265 (3%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GVSG 167
           +V+      +    LG ++              + +    +R +  +         G   
Sbjct: 14  VVRAYRKISTPLVRLGHMLVFFVRALHGLPVALRHYRKEFVRLLSDIAWGNGSLVVGGGT 73

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
             V +++    GA++  +G   L   G    +  + S++  RE+  +  ++  A ++G  
Sbjct: 74  AGVAVVLGITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQAGCR 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++GSM+I EEIDA+ ++G+  +  L++ R+ A ++++  L +L    + +   IV+ 
Sbjct: 134 FTAQLGSMRIAEEIDALESLGIRPIPYLVTTRLMASVVAVIPLYVLCLAVSYLTTQIVVQ 193

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                    +   F    +  +I   ++K          +    GF        +G    
Sbjct: 194 IISGGSAGSYLHYFTLMLSGQDILYSVLKTVIFVWIASTIQCYYGFYASGGPVGVGVAAG 253

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372
             +  SI++VI+++ L  +  +++ 
Sbjct: 254 HAMRASITVVIMVNMLLTMALWSVD 278


>gi|126436263|ref|YP_001071954.1| hypothetical protein Mjls_3686 [Mycobacterium sp. JLS]
 gi|126236063|gb|ABN99463.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 270

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 103/245 (42%), Gaps = 1/245 (0%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
           + +       +G + + + +     ++        + Q ++V    +   +L++     +
Sbjct: 17  VKNLAGPMAAVGGLFAMSADAIRYVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76

Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
           ++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEI
Sbjct: 77  VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
            A+  +G+D V+ L++PR+ A  +   LL  L     I+G         D+    F +  
Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360
                +  +    +KA       G+VA   G  V G  + ++G  V   VV +   +  I
Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256

Query: 361 DSLFA 365
           + L  
Sbjct: 257 NVLVT 261


>gi|146328846|ref|YP_001209755.1| hypothetical protein DNO_0858 [Dichelobacter nodosus VCS1703A]
 gi|146232316|gb|ABQ13294.1| conserved hypothetical membrane protein [Dichelobacter nodosus
           VCS1703A]
          Length = 262

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 2/249 (0%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
             +Q   L      T +            +  I+ +++ GV  +P++++     G V+A 
Sbjct: 14  VLTQLAALAEFSFLTLQLHWQLSILWRRPMLWIKALFHAGVLSLPIIMVSGLFVGMVLAL 73

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           Q    +S FGAE  +  L+++  +RE+G ++TA++ AGR+GSAI AEIG MK  E++DA+
Sbjct: 74  QAFINMSLFGAEQSTSTLVALSLMRELGSVVTALLFAGRAGSAITAEIGLMKTTEQLDAM 133

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++ +  +  PR +  +++LPLL I+   +A++GA  V   +  +   +F+S+    
Sbjct: 134 TMMGVEPLAQIGVPRFFGALLALPLLAIIFVATAMVGAYWVAVPHLGLDNGIFWSQLQRG 193

Query: 305 ATLA-NIFTGL-IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                NI  G+ +K+         +++ +GF     +  + +  T  VV S   V+ +D 
Sbjct: 194 VGFYQNIVLGIGVKSLVFGWLCAAISVFQGFVCVPTAQGMAQATTKTVVLSSLAVLAVDF 253

Query: 363 LFAIFYFAI 371
           L     FA+
Sbjct: 254 LLTSLMFAL 262


>gi|326382582|ref|ZP_08204273.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198701|gb|EGD55884.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 282

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 98/263 (37%), Gaps = 10/263 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVS-------- 166
           + + K           +G +I+   +    +   F  +   + R +  V           
Sbjct: 9   EWLKKLWQAPRDGIVAMGHLITFLVKSIGLAPITFTHYRKEVWRLLSDVAWGNGAIVVGG 68

Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V++++  + GA +  +G   L+  G    +  L +    REI  LL A     +SG
Sbjct: 69  GTVGVMVILGVMGGATVGIEGYTALNLLGMSPITGGLSAFATTREIAPLLAATAFTAQSG 128

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
               A++GSM+I+EEIDA+ ++ +  +  L++ R+ A ++S+  L  ++  +  +    +
Sbjct: 129 CRFTAQLGSMRISEEIDALESIAIRPLPYLVTTRMAAAVLSIIPLYAISLAANYVACQFM 188

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                      +   F       ++    +K          +    G+        +G  
Sbjct: 189 FQVQSGQGAGTYLHYFDQFILSRDVVFSFLKVIVFVLLTTFIQCYYGYFASGGPEGVGVA 248

Query: 346 VTTCVVQSISIVIIIDSLFAIFY 368
               +  SI  ++  + +  + +
Sbjct: 249 AGHAIRLSIITIVFANLILTLVF 271


>gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC
           13950]
          Length = 286

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 107/273 (39%), Gaps = 6/273 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           S  +               +    +   A  LG +      +   + +    +      +
Sbjct: 8   SQLFPRLSYTLDGWVAGWRRIGAQARFYARTLGAIRDALSSYKHETLRMIAEMGLGAGAL 67

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   V +V  ++   G+++  QG   LS  G E  +  + + +  R +  L   + +
Sbjct: 68  AVIG-GTVGIVGFLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGL 126

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           +   G+   A++G+M+INEEIDA+  MG+  +  L+S R+ A ++ +  L  +  + +  
Sbjct: 127 SATIGAGTTAQLGAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFY 186

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            A       Y  P  V+   F +     +I   L++A  M   + +V    G+       
Sbjct: 187 AARFATTSVYGQPTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPA 246

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
            +G+ V   V  S+       ++  I + ++ I
Sbjct: 247 GVGEAVGRAVRSSMVS-----AVLVILFSSLAI 274


>gi|226361227|ref|YP_002779005.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226239712|dbj|BAH50060.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 302

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 115/279 (41%), Gaps = 1/279 (0%)

Query: 90  RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGE-FCASSYK 148
                             +     +GK + +    S +     G + +N      + +  
Sbjct: 14  PAGPAQADRSAPEKRRRPRLSVAAVGKYLKETPIRSLATLGRSGELAANILRYTVSDTIA 73

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +  L  +  QM+ +        +L++   GA ++ Q    ++Q GA   +     +  +
Sbjct: 74  LRLPLEEVATQMWKLLKVTALPALLMAVPIGAEVSVQVGGIMNQVGANSLAGAASGLGVV 133

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
            +   +   ++++G + SAI +++G+  I EEI+AIR MG+D V+ L+ PR  A+I   P
Sbjct: 134 GQGAPMAAGLLMSGAAASAIASDLGARAIREEIEAIRVMGIDPVQRLVVPRFIAMIAIAP 193

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           +L I+   + +    ++     D+    F+  F S AT  ++   ++K+   A  + ++A
Sbjct: 194 MLCIVIVAAGVAAGLVISANVNDVVPGSFWQSFGSFATPTDLVFSVLKSVIFAALVVLIA 253

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              G         +   V   VV S+  + + + + +  
Sbjct: 254 SLRGLEAKGGPKGVANAVNASVVLSVFCIFMTNLVVSQI 292


>gi|169631107|ref|YP_001704756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243074|emb|CAM64102.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 320

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 129/305 (42%), Gaps = 4/305 (1%)

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126
              +L+  +    +   + S +  +      P               I + +   ++ + 
Sbjct: 6   ADARLEPAADDWTETPDVESGSKSEDDHTSDPAAGALPQLLDRAPRLIKRPVAYAVSQTD 65

Query: 127 SQAHILGL----VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           S    LG     V+ +     +   + +      + Q +++    V   IL+S   G ++
Sbjct: 66  SMLKTLGRYVDLVVQSFAFLISDIVRLRHPWQDTVIQSWFILTVTVVPAILVSIPFGVIV 125

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A Q    +SQ GA   S     +  +++   ++ A+++ G +GSA+  ++G+  I EE+D
Sbjct: 126 AVQAGSIISQVGASSISGAAGGLGVIQQGAPIVAALLLGGAAGSAVATDLGARSIREEVD 185

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+R MG++ V+ L++PR+ A++   PLL I   F  I    +V   +       + S F 
Sbjct: 186 AMRVMGVNPVQRLVTPRLAAILFVSPLLCIFIIFVGIFAGYLVNVGFQGGTPGSYLSSFA 245

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           + A ++++   ++K       + +VA + G      +  +   V   VV  +  V+++++
Sbjct: 246 AFANVSDVTVAVLKTWLFGVVVILVACQRGLEAKGGARGVADAVNATVVIGVVTVMVLNT 305

Query: 363 LFAIF 367
           +    
Sbjct: 306 VITQI 310


>gi|118469400|ref|YP_885536.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170687|gb|ABK71583.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 285

 Score =  138 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 109/278 (39%), Gaps = 9/278 (3%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           S +  +        G++  K I             ++            +G  + L+  +
Sbjct: 4   SPYVPTLLAPWVRFGQRASKPIVRLGHMLVFFVRAVAAIPIVLRHY---RGEFVRLLSDI 60

Query: 161 Y------YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
                   VG     V +++    GA++  +G   L   G    +  + S++  RE+  +
Sbjct: 61  AWGNGSLVVGGGTAGVAVVLGITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPI 120

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
             ++  A ++G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A ++++  L ++ 
Sbjct: 121 AASLAFATQAGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMAAVVAVIPLYVMC 180

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              + +    V++         +   F    +  +I   L+K          V    GF 
Sbjct: 181 LAVSYLTTQTVVFLISGGSTGSYLHYFTLMLSGQDILYSLLKTIIFVWIASTVQCYYGFY 240

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
                  +G      +  SI++VII++ L  +  +++ 
Sbjct: 241 ASGGPVGVGVAAGHAMRASITVVIIVNMLLTMALWSVD 278


>gi|284043083|ref|YP_003393423.1| hypothetical protein Cwoe_1620 [Conexibacter woesei DSM 14684]
 gi|283947304|gb|ADB50048.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 246

 Score =  138 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 1/198 (0%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
            P+++            Q A  L  FGA         +  +RE    +TA+++AG +G+A
Sbjct: 36  FPLLVSTVAFGYGAPGLQAANFLVLFGALDRLGGFFVLASIREFAPFVTAIVLAGVAGTA 95

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           I A++G+ KI EE+DA++ +G+D V+ L+ PR  AL++   L  + A    + G  ++  
Sbjct: 96  ITADLGARKIREELDALQVLGVDPVKNLVVPRFLALMLVTGLFDVYALLFGVFGG-VIAT 154

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                P   FF+ F + A+  +++  L+K       I IV   +G      +  +G+ V 
Sbjct: 155 LVNGAPLGPFFATFLTNASTTDLWGSLLKTTLFGAIIAIVCCYKGMTASGGAEGVGRAVN 214

Query: 348 TCVVQSISIVIIIDSLFA 365
             VV +   +   + +F 
Sbjct: 215 QAVVIAFMGIFAFNYVFT 232


>gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare ATCC
           13950]
          Length = 255

 Score =  138 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 100/245 (40%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       + Q +++        I++S     ++
Sbjct: 3   DQLQTPLELVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 62

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 63  IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 122

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   
Sbjct: 123 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 182

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +   L  +    +KA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 183 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 242

Query: 363 LFAIF 367
           +    
Sbjct: 243 VLTTI 247


>gi|226364102|ref|YP_002781884.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242591|dbj|BAH52939.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 289

 Score =  138 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 102/253 (40%), Gaps = 8/253 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173
           +  + +   Q H     ++            K  +  L       G        + V+ L
Sbjct: 26  IGHMEEMGRQLHFYTHAVTAIPRTFRRYR--KETIRLLAEVSMGTGALAVIGGTLVVISL 83

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++   G  + QQGA  + + G    S  + +    RE   ++  + +    G+   A++G
Sbjct: 84  LTTAVGYEVGQQGATSMGRIGIGALSGFISAFFNTREAIPVIAGIALTATVGAGFTAQLG 143

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+++EEIDA+ TM +  +  L++ R+ A II++  L  +A F   +   +V     +  
Sbjct: 144 AMRVSEEIDAMETMSIPSLPYLVTTRVTAGIIAVIPLYAVALFVGYVATQLVTEYLGEAS 203

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   F+     +++   ++K   M+  +  V    G+        +G  V   V  S
Sbjct: 204 -GTYQHYFNVFLVPSDVAWSMVKVLAMSVVVMCVHCYHGYNAKGGPAGVGVAVGRAVRTS 262

Query: 354 ISIVIIIDSLFAI 366
           +  +++ID L  I
Sbjct: 263 LIAIMVIDLLVGI 275


>gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 [Mycobacterium sp. JLS]
 gi|126236543|gb|ABN99943.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 284

 Score =  138 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 16/262 (6%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------PVV 171
           V   N   +Q    G  I    +        +  ++ LI QM  +GV  +        +V
Sbjct: 21  VNGWNRIGTQTQFYGETIKGIWDAVVHY---RTEVVRLIAQM-SLGVGALAVIGGTIVIV 76

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++   G++IA Q   QL Q G E  +    + L +R +  L+  + +A   G+   A+
Sbjct: 77  GFLTLSAGSLIAVQAYSQLQQVGVEALAGFTSAFLNVRLVSPLVAGIGLAATIGAGATAQ 136

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+I+EE+DA+  MG+  V  L S R+ A +I +  L  +A  +A           Y 
Sbjct: 137 LGAMRISEEVDALEVMGIRSVAYLASSRVLAGVIVVIPLYCIAVLAAFAATRTGTTLVYG 196

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               V+   F++     ++    ++A  MA  + +V    GF        +G+ V   V 
Sbjct: 197 QSTGVYDHYFYTFLNPTDLIYSFLQAISMAVVVMLVHTYYGFTATGGPAGVGEAVGRAVR 256

Query: 352 QSISIVIIIDSLFAIFYFAIGI 373
            S+       ++F   + ++ I
Sbjct: 257 TSLVA-----AVFVTLFVSLAI 273


>gi|111023084|ref|YP_706056.1| hypothetical protein RHA1_ro06121 [Rhodococcus jostii RHA1]
 gi|110822614|gb|ABG97898.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 286

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 3/259 (1%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYY 162
              +      ++ +  +     +    G VI+         ++    +   +S       
Sbjct: 8   PAVHWVRARARQPLDLMTGLGREFTFYGSVIAGVPLAIVKYWRHIMRQIGDISFGGATLL 67

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G   + VV  +S V    +  +G   L   G    S  L +IL  RE+  ++ ++ +A 
Sbjct: 68  AGGGAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAA 127

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           + G+   A++G+M+I+EEI A+  M +  +  L S R+ + +I +  L ++   S+ + +
Sbjct: 128 KVGTGFTAQLGAMRISEEISALDAMAIRSLPFLASTRLVSCLICVVPLYVVGLLSSYLAS 187

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            +VI  +       +   FH   T  ++    +KA   A  I +V    G+        +
Sbjct: 188 RLVIVTFGGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAHGGPEGV 247

Query: 343 GKKVTTCVVQSISIVIIID 361
           G+     +  SI  + I+D
Sbjct: 248 GRAAGRALRTSILAIGIVD 266


>gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104]
 gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 258

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 98/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G           + +++       + Q +++        I++S     ++      
Sbjct: 12  LTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLLIFTLNV 71

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEIDA+  +G
Sbjct: 72  LLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLG 131

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   +   L 
Sbjct: 132 IDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLP 191

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+V    G  V   S  LG  V   VV  +  +  ++ +    
Sbjct: 192 EVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNVVLTTI 250


>gi|308810118|ref|XP_003082368.1| unnamed protein product [Ostreococcus tauri]
 gi|116060836|emb|CAL57314.1| unnamed protein product [Ostreococcus tauri]
          Length = 361

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 5/210 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           KF+  + + A + G V+             +      ++Q+  VG   + V +L S   G
Sbjct: 105 KFLWRATATALLFGSVLYRLVR-----EPKRVNWEQTLQQIARVGPQTLGVSLLTSSFVG 159

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V   Q   + ++ G +     L+ +   RE+  ++ A+++ GR GS+I AE+G+M++ E
Sbjct: 160 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 219

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           ++D +  +G D V  L+ PR+ A  ISLP+L++L+   ++  + ++    Y +   V   
Sbjct: 220 QVDQLTVLGTDPVDYLVIPRVIACSISLPILSVLSFAQSLGASILLADLRYGVSPNVIID 279

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAM 329
                   ++I     K+      I  ++ 
Sbjct: 280 SVAKYVEPSDIGVMAAKSIAFGAVIAAISC 309


>gi|326382401|ref|ZP_08204093.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199131|gb|EGD56313.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 245

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 104/230 (45%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                       +     ++ Q ++V        IL++   G +++ Q      Q GA  
Sbjct: 6   ALRWTVYDIVTGRFPFREVVVQTWFVITVTTLPAILVAIPFGVIVSVQVGSLTQQVGATS 65

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
            +     +  +++   ++TA+++ G +GSAI +++G+  + EEIDA+ T+GL+  R +++
Sbjct: 66  IAGAAGGLGIIQQGAPIVTALLLGGAAGSAIASDLGARTVREEIDAMETLGLNPTRRVVA 125

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
           PR  A++I  P+L +L  F+ ++   I+      I    + + F S A+ A+I   LIK+
Sbjct: 126 PRFVAVLIVAPMLCMLIVFTGLVAGYILSVNVQGITPGSYVASFASFASSADIVVALIKS 185

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                 +  +A   G +       + + V   VV  +    +I+ +    
Sbjct: 186 VVFGLVVVAIACHRGLSTKGGPKGVAESVNATVVLGVVACFVINVVITQL 235


>gi|30468225|ref|NP_849112.1| ORF251 [Cyanidioschyzon merolae strain 10D]
 gi|30409325|dbj|BAC76274.1| ycxr [Cyanidioschyzon merolae strain 10D]
          Length = 251

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 1/240 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
                 +  ++    +     + ++  L  +  Q+ ++    + +  + S   G V+  Q
Sbjct: 1   MQMISSILSILRFQAQIIVHLFHWRYPL-MIKWQIAWIAEQSLSLCWIHSCFLGMVLCLQ 59

Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
            A +L    A      ++ +  LRE+  + TA+++  R  S+  +E+ SM ++E+ DA+ 
Sbjct: 60  LAKELISLQATPMIGAILGLTLLRELSPVFTAILLTARVASSYTSELASMCVSEQFDALY 119

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
            +     ++ I PR  A +I LPL T     +++  +  +    Y IP  +F +   S+ 
Sbjct: 120 LLQTHPFQLHIIPRYLACLIMLPLCTWFCFLTSLSASLFLACLAYGIPVNLFLTSLRSSL 179

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
           +L +I T L+KA      + +++          S  +    T  VV  + +++  D L +
Sbjct: 180 SLWDILTSLLKAMIFGALLALISCHYALITRGGSKQIAISTTRAVVHVLVLILAFDWLLS 239


>gi|126433443|ref|YP_001069134.1| hypothetical protein Mjls_0834 [Mycobacterium sp. JLS]
 gi|126233243|gb|ABN96643.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 281

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166
           +     +         +GL +    +  +S       +    ++QM  +           
Sbjct: 8   RLFEATVGMVGGVFREVGLWVVFIAKAFSSVPVAVFKYRRQTLQQMNSLAWGRGSLIVDG 67

Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             + V++L+    GA +A +    L+  G    S  +  I  +RE+G +++AV  AG++G
Sbjct: 68  GAISVLLLLGIAVGASLAVEAFAVLNIIGFGGLSGIIGGIGGVRELGPIVSAVAFAGQAG 127

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
             + AEIG+M+I EEIDA+  +GL  +  ++  R+   +I +    ++A  +       V
Sbjct: 128 CRMTAEIGAMRIAEEIDALEAIGLRPIPFVVGTRLIGAMILVVPGYLVALIANFFVMDTV 187

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
           I  +++ P   +   F    T  ++   +IK      A+ ++    G+        +G+ 
Sbjct: 188 IRVFHNQPGGTYNHYFAQFVTPTDLAYSVIKVAVFCMAVTLIHCYYGYFASGGPVGVGRA 247

Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371
               V  S+  +I +D +  +  + +
Sbjct: 248 SGRAVRTSLITIIFLDLILTVAMWGL 273


>gi|325003317|ref|ZP_08124429.1| integral membrane protein yrbe4b [Pseudonocardia sp. P1]
          Length = 280

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 10/271 (3%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG- 167
           +   +G +  +      +Q   LG  +S          K  K +   + R +  V     
Sbjct: 1   MATQLGTRARRLAQAPLNQLEELGDQLSLYTRSIVWIPKTLKDYRKEVARLLAEVSFGSG 60

Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
                   V V+  +S   G+++  QG   L   G E  +  + +    R I  L+ A  
Sbjct: 61  ALIVILGTVGVMASLSLFVGSLVGLQGFRALDALGVEALTGFITAYFNTRSIAPLVAASA 120

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +    G+   A++G+M+I+EEIDA+  M +  V  L++ R+ A I+++  +  L   ++ 
Sbjct: 121 LTATLGAGFTAQLGAMRISEEIDALEVMAVPSVPYLVTTRVIAGIVAIIPIYTLGLLASY 180

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
             A + +     +    +   F     ++++    +K    A  I ++    G+A     
Sbjct: 181 AAARLNVTLVNGLSGGTYDHYFDLFLPVSDVLLSYLKVIVFATVIILIHCHYGYAAKGGP 240

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
             +G  V   V  SI    I+D    +  F 
Sbjct: 241 AGVGVAVGRAVRLSIVSTAILDFFLTLVMFG 271


>gi|84494809|ref|ZP_00993928.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
 gi|84384302|gb|EAQ00182.1| putative ABC transporter integral membrane protein [Janibacter sp.
           HTCC2649]
          Length = 203

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 99/198 (50%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S   GAVIA Q      Q GA+ F+     +  +RE   ++TA++IAG  GSAI A++G
Sbjct: 1   MSIPFGAVIALQLGTLTRQLGAQSFTGAASVLAVVREASPIVTALLIAGAGGSAICADLG 60

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           S KI EE+DA+  +G+  ++ L+ PR+ A ++   LL  L +   + G            
Sbjct: 61  SRKIREELDAMEVLGISPIQRLVVPRVLATMLVAVLLNGLVSVVGVGGGYFFNVVIQGGT 120

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              + + F + A LA+++T  IKA        IVA  +G   G     +G  V   VV +
Sbjct: 121 PGAYLASFTALAQLADLWTSEIKALLFGAVAAIVASYKGLTAGGGPKGVGDAVNQSVVIT 180

Query: 354 ISIVIIIDSLFAIFYFAI 371
             ++ +I+ + +  YF +
Sbjct: 181 FMLLFVINFVISAIYFQV 198


>gi|226365583|ref|YP_002783366.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226244073|dbj|BAH54421.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 286

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 10/260 (3%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG--- 167
           +     +   +         LG   +  G   A        +   ++RQ+  +   G   
Sbjct: 7   WPAAHWVRARVRQPLGLMTGLGREFTFYGSVIAGVPLAVVKYWRHIMRQIGDISFGGATL 66

Query: 168 ------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
                 + VV  +S V    +  +G   L   G    S  L +IL  RE+  ++ ++ +A
Sbjct: 67  LAGGGAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALA 126

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
            + G+   A++G+M+I+EEI A+  M +  +  L S R+ + +I +  L ++   S+ + 
Sbjct: 127 AKVGTGFTAQLGAMRISEEISALDAMAIPSLPFLASTRLVSCLICVVPLYVVGLLSSYLA 186

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
           + +VI  +       +   FH   T  ++    +KA   A  I +V    G+        
Sbjct: 187 SRLVIVTFSGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAYGGPEG 246

Query: 342 LGKKVTTCVVQSISIVIIID 361
           +G+     +  SI  + I+D
Sbjct: 247 VGRAAGRALRTSILAIGIVD 266


>gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396570|gb|AAS04434.1| hypothetical protein MAP_2117c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 255

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 106/239 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG     + E  A++ +       ++ Q+++V    +   I++S     +I      
Sbjct: 10  MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S     +  + ++G ++TA++++G   +A+ A++G+  I EEIDA++ +G
Sbjct: 70  LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PRI A      +L  +     + G+ I +     +    F +       L 
Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   LIKA     + G++A  +G +VG     +G  V   VV S   +  I+ L    
Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248


>gi|311744213|ref|ZP_07718017.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311312386|gb|EFQ82299.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 257

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 112/239 (46%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G +     +    ++  +      + Q +++    +   IL+S   GA+IA Q      Q
Sbjct: 13  GQIAGMAIDVLRLTFTTRFQTREFVEQAWFITSVTLVPTILVSIPFGAIIALQVGSLTGQ 72

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA+ F+     +  +RE   +  A++IAG +GSAI +++G+ KI EEIDA+  +G+D +
Sbjct: 73  LGAQSFAGATAVLATVREAAPIAAALVIAGAAGSAICSDLGARKIREEIDAMEVLGIDPL 132

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
             L+ PR  A +    L+  +   + I G               F S F + ATL +++ 
Sbjct: 133 ARLVVPRALATVAVALLINGIVITAGIAGGYFFTVVVQGGSAGAFLSSFAALATLPDVYV 192

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
            ++KA        IVA  +G   G   + +G+ V   V+ +  ++ +++++    YF I
Sbjct: 193 AMVKAAVFGFLTAIVAANKGLTAGGGPSGVGRAVNEAVILAFMLLFLLNAIITALYFQI 251


>gi|312137895|ref|YP_004005231.1| integral membrane protein yrbe1a [Rhodococcus equi 103S]
 gi|311887234|emb|CBH46543.1| putative integral membrane protein YrbE1A [Rhodococcus equi 103S]
          Length = 258

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 110/247 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
           +    +++G  +        +  + +  L   ++Q  ++G       +L+    G  +A 
Sbjct: 5   ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 64

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                  + GA  +S  +++ + + +   L+ A+M+AG +GSAI  ++GS KI EEIDA+
Sbjct: 65  SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 124

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG+D V  L++PR+ A ++    L  +  F  ++   +       +P   F + F   
Sbjct: 125 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 184

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              A+    L+KA   A    +VA  +G         +   V   VV + ++V ++++  
Sbjct: 185 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 244

Query: 365 AIFYFAI 371
           +  Y  I
Sbjct: 245 SALYTVI 251


>gi|296141464|ref|YP_003648707.1| hypothetical protein Tpau_3790 [Tsukamurella paurometabola DSM
           20162]
 gi|296029598|gb|ADG80368.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 284

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 88/199 (44%)

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
           ++   +GA +A +    L+  G    +  +  +  +RE+  +   +  A ++G  + A+I
Sbjct: 78  ILGAASGAAVAIEAYAGLNLIGFGPLTGVIGGLANIREMIPISAGIGFAAQAGCRMTAQI 137

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           GSM+I EEIDA+  +G+  +  ++S R+ A I+ +    +L    A +   +++  ++  
Sbjct: 138 GSMRIAEEIDAVEALGIRSIPYVVSTRLIAGIVVVIPAYLLTLLLAFLTCKLIVVVFHGQ 197

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               +   F    +  +I    +KA     A+ I+    G+        +G      V  
Sbjct: 198 AQGTYNHYFEQFLSPGDILLSTVKAVVFCAAVTIIHCYYGYFAKGGPEGVGLASGRAVRA 257

Query: 353 SISIVIIIDSLFAIFYFAI 371
           S+  V+ +D +  I  + +
Sbjct: 258 SLVTVLTLDFILTIVMWGV 276


>gi|296141836|ref|YP_003649079.1| hypothetical protein Tpau_4171 [Tsukamurella paurometabola DSM
           20162]
 gi|296029970|gb|ADG80740.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 103/266 (38%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
                       Y   + ++  +           ++I +     +         L+  R 
Sbjct: 6   YRPRGTRTLGRVYTWLRGVLARLGHMMGFCVQAVIMIPHAARHYSRQTISTVTDLTWGRG 65

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
              VG     +++++    G  +A Q    L   G    +  + ++  +RE   +L A  
Sbjct: 66  AVIVGGGTSLMMVVLGLAVGGTVAVQAFSTLDLLGMGPLTGSISALANIREFAPILAAAG 125

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
            A ++G  + AEIG+M+INEEIDA+ ++GL  +  ++S R+ A +I++    ++A   + 
Sbjct: 126 FAVQAGCRMTAEIGAMRINEEIDALESLGLRSISFVVSTRVLAGLIAVIPTFLIAIVVSF 185

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
              S+++          +   F    +  ++    +K       + ++   +GF      
Sbjct: 186 FACSVIVTVVQGESAGAYTHYFRQFLSGPDLLASTVKVIVFLIVVILIHCYQGFFAAGGP 245

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFA 365
             +G      V  S+  ++++D L  
Sbjct: 246 EGVGVASGRAVRASLVSIVVLDMLLT 271


>gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium 104]
 gi|254774784|ref|ZP_05216300.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118167350|gb|ABK68247.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 255

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 107/239 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG     + E  A++ +       ++ Q+++V    +   I++S     +I      
Sbjct: 10  MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S     +  + ++G ++TA++++G   +A+ A++G+  I EEIDA++ +G
Sbjct: 70  LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PRI A      +L  +   + + G+ I +     +    F +       L 
Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVTGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   LIKA     + G++A  +G +VG     +G  V   VV S   +  I+ L    
Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248


>gi|215404242|ref|ZP_03416423.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|218753676|ref|ZP_03532472.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis GM
           1503]
 gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026 [Mycobacterium tuberculosis KZN
           1435]
 gi|254550984|ref|ZP_05141431.1| hypothetical protein Mtube_11066 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|297634533|ref|ZP_06952313.1| hypothetical protein MtubK4_10441 [Mycobacterium tuberculosis KZN
           4207]
 gi|253320491|gb|ACT25094.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           KZN 1435]
          Length = 269

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 105/252 (41%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K   +  +        LG   + T +     +K        + Q ++V        +L++
Sbjct: 11  KAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMT 70

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
                +        L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+ 
Sbjct: 71  IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGAR 130

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            I EE+DA+R MG++ ++ L +PR+ A       L  +   + +IGA         +   
Sbjct: 131 TIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAG 190

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + +   +     ++   +IKA       G++A  +G +VG     +G+ V   VV +  
Sbjct: 191 AWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFI 250

Query: 356 IVIIIDSLFAIF 367
           ++ +I+ +    
Sbjct: 251 VLFVINIVVTAV 262


>gi|260203312|ref|ZP_05770803.1| hypothetical protein MtubK8_03235 [Mycobacterium tuberculosis K85]
 gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85]
 gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85]
          Length = 265

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 101/245 (41%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       I Q +++   G    I++S     ++
Sbjct: 13  DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 73  IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A ++   LL  L     ++G  +      ++    + +   
Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    IKA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252

Query: 363 LFAIF 367
           +    
Sbjct: 253 ILTTI 257


>gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 257

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 107/250 (42%), Gaps = 1/250 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +    +       +G + S + +    +++        + Q +++    +   +L++   
Sbjct: 1   MNLGRNLSGPMQAVGALFSMSLDAIMFAFRRPFQGREFLDQCWFIARVSMAPTLLVAIPF 60

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
             +++      L + GA   S    +   + ++G ++T +++AG   +A+ A++GS  I 
Sbjct: 61  TVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPMVTVLIVAGAGATAMCADLGSRTIR 120

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +G++ ++ L++PRI A  +   LL  L     I+G  +      D+    F 
Sbjct: 121 EEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSVFIQDVNPGAFA 180

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357
           +       +  +    IKA       G+VA   G   VG  + ++G  V   VV +   +
Sbjct: 181 AGITLLTGVPEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAVNETVVYAFMAL 240

Query: 358 IIIDSLFAIF 367
            +I+ +    
Sbjct: 241 FVINVVVTAI 250


>gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis H37Rv]
 gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551]
 gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97]
 gi|121636079|ref|YP_976302.1| integral membrane protein YrbE1a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148659931|ref|YP_001281454.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra]
 gi|148821359|ref|YP_001286113.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis F11]
 gi|167970287|ref|ZP_02552564.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis H37Ra]
 gi|215406160|ref|ZP_03418341.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|215414032|ref|ZP_03422691.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215448446|ref|ZP_03435198.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T85]
 gi|218755901|ref|ZP_03534697.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis GM
           1503]
 gi|224988552|ref|YP_002643239.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797089|ref|YP_003030090.1| hypothetical protein TBMG_00168 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233556|ref|ZP_04926882.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis C]
 gi|254366619|ref|ZP_04982663.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549106|ref|ZP_05139553.1| hypothetical protein Mtube_01351 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185030|ref|ZP_05762504.1| hypothetical protein MtubCP_03112 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289445698|ref|ZP_06435442.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552419|ref|ZP_06441629.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 605]
 gi|289747934|ref|ZP_06507312.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|289760269|ref|ZP_06519647.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289764283|ref|ZP_06523661.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis GM 1503]
 gi|294994641|ref|ZP_06800332.1| hypothetical protein Mtub2_09017 [Mycobacterium tuberculosis 210]
 gi|297632645|ref|ZP_06950425.1| hypothetical protein MtubK4_00901 [Mycobacterium tuberculosis KZN
           4207]
 gi|297729620|ref|ZP_06958738.1| hypothetical protein MtubKR_00931 [Mycobacterium tuberculosis KZN
           R506]
 gi|298527559|ref|ZP_07014968.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A]
 gi|306774257|ref|ZP_07412594.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu001]
 gi|306779001|ref|ZP_07417338.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu002]
 gi|306782789|ref|ZP_07421111.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu003]
 gi|306787156|ref|ZP_07425478.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu004]
 gi|306791712|ref|ZP_07430014.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu005]
 gi|306795756|ref|ZP_07434058.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu006]
 gi|306801752|ref|ZP_07438420.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu008]
 gi|306805963|ref|ZP_07442631.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu007]
 gi|306970359|ref|ZP_07483020.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu009]
 gi|306974591|ref|ZP_07487252.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu010]
 gi|307082300|ref|ZP_07491470.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu011]
 gi|307082645|ref|ZP_07491758.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu012]
 gi|313656946|ref|ZP_07813826.1| hypothetical protein MtubKV_00916 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2213504|emb|CAB09750.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A
           [Mycobacterium tuberculosis H37Rv]
 gi|13879657|gb|AAK44396.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31616930|emb|CAD93037.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A
           [Mycobacterium bovis AF2122/97]
 gi|110348076|gb|ABG72765.1| YrbE1A [Expression vector yrbE1AB]
 gi|121491726|emb|CAL70188.1| Conserved hypothetical integral membrane protein yrbE1A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124603349|gb|EAY61624.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis C]
 gi|134152131|gb|EBA44176.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504083|gb|ABQ71892.1| conserved hypothetical integral membrane protein YrbE1a
           [Mycobacterium tuberculosis H37Ra]
 gi|148719886|gb|ABR04511.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis F11]
 gi|224771665|dbj|BAH24471.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318592|gb|ACT23195.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289418656|gb|EFD15857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437051|gb|EFD19544.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 605]
 gi|289688462|gb|EFD55950.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           02_1987]
 gi|289711789|gb|EFD75805.1| hypothetical integral membrane protein yrbE1A [Mycobacterium
           tuberculosis GM 1503]
 gi|289715833|gb|EFD79845.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298497353|gb|EFI32647.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A]
 gi|308217091|gb|EFO76490.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu001]
 gi|308328029|gb|EFP16880.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu002]
 gi|308332309|gb|EFP21160.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu003]
 gi|308336191|gb|EFP25042.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu004]
 gi|308339691|gb|EFP28542.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu005]
 gi|308343698|gb|EFP32549.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu006]
 gi|308347571|gb|EFP36422.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu007]
 gi|308351470|gb|EFP40321.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu008]
 gi|308352197|gb|EFP41048.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu009]
 gi|308356146|gb|EFP44997.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu010]
 gi|308360101|gb|EFP48952.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu011]
 gi|308367649|gb|EFP56500.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           SUMu012]
 gi|323717156|gb|EGB26365.1| hypothetical protein TMMG_00596 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905924|gb|EGE52857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           W-148]
 gi|328456876|gb|AEB02299.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864228|gb|AEB53197.1| conserved integral membrane protein YRBE1A [Mycobacterium
           tuberculosis]
          Length = 265

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 101/245 (41%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       I Q +++   G    I++S     ++
Sbjct: 13  DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 73  IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A ++   LL  L     ++G  +      ++    + +   
Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    IKA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252

Query: 363 LFAIF 367
           +    
Sbjct: 253 ILTTI 257


>gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Rv]
 gi|15841439|ref|NP_336476.1| hypothetical protein MT2016 [Mycobacterium tuberculosis CDC1551]
 gi|148661773|ref|YP_001283296.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra]
 gi|167970514|ref|ZP_02552791.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium tuberculosis H37Ra]
 gi|215411646|ref|ZP_03420442.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427323|ref|ZP_03425242.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T92]
 gi|215430874|ref|ZP_03428793.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           EAS054]
 gi|215446167|ref|ZP_03432919.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T85]
 gi|219557918|ref|ZP_03536994.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T17]
 gi|254232134|ref|ZP_04925461.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis C]
 gi|254364783|ref|ZP_04980829.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260186935|ref|ZP_05764409.1| hypothetical protein MtubCP_13013 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201057|ref|ZP_05768548.1| hypothetical protein MtubT4_13279 [Mycobacterium tuberculosis T46]
 gi|289443448|ref|ZP_06433192.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T46]
 gi|289447581|ref|ZP_06437325.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554259|ref|ZP_06443469.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           605]
 gi|289570054|ref|ZP_06450281.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T17]
 gi|289746097|ref|ZP_06505475.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|289750548|ref|ZP_06509926.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T92]
 gi|289754061|ref|ZP_06513439.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289758074|ref|ZP_06517452.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289762119|ref|ZP_06521497.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis GM 1503]
 gi|294996886|ref|ZP_06802577.1| hypothetical protein Mtub2_20868 [Mycobacterium tuberculosis 210]
 gi|297731521|ref|ZP_06960639.1| hypothetical protein MtubKR_10546 [Mycobacterium tuberculosis KZN
           R506]
 gi|298525458|ref|ZP_07012867.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776196|ref|ZP_07414533.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu001]
 gi|306784727|ref|ZP_07423049.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu003]
 gi|306803683|ref|ZP_07440351.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu008]
 gi|306968080|ref|ZP_07480741.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu009]
 gi|306972305|ref|ZP_07484966.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu010]
 gi|307080016|ref|ZP_07489186.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu011]
 gi|307084590|ref|ZP_07493703.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu012]
 gi|308369573|ref|ZP_07418314.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu002]
 gi|308372102|ref|ZP_07427406.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu004]
 gi|308373284|ref|ZP_07431721.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu005]
 gi|308374452|ref|ZP_07436104.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu006]
 gi|308375733|ref|ZP_07444925.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu007]
 gi|313658854|ref|ZP_07815734.1| hypothetical protein MtubKV_10556 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950434|emb|CAA17837.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A
           [Mycobacterium tuberculosis H37Rv]
 gi|13881678|gb|AAK46290.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601193|gb|EAY60203.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis C]
 gi|134150297|gb|EBA42342.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505925|gb|ABQ73734.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium tuberculosis H37Ra]
 gi|289416367|gb|EFD13607.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T46]
 gi|289420539|gb|EFD17740.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289438891|gb|EFD21384.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           605]
 gi|289543808|gb|EFD47456.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T17]
 gi|289686625|gb|EFD54113.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           02_1987]
 gi|289691135|gb|EFD58564.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           T92]
 gi|289694648|gb|EFD62077.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289709625|gb|EFD73641.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis GM 1503]
 gi|289713638|gb|EFD77650.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298495252|gb|EFI30546.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308215376|gb|EFO74775.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu001]
 gi|308327131|gb|EFP15982.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu002]
 gi|308330567|gb|EFP19418.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu003]
 gi|308334401|gb|EFP23252.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu004]
 gi|308338197|gb|EFP27048.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu005]
 gi|308341892|gb|EFP30743.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu006]
 gi|308345381|gb|EFP34232.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu007]
 gi|308349684|gb|EFP38535.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu008]
 gi|308354314|gb|EFP43165.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu009]
 gi|308358256|gb|EFP47107.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu010]
 gi|308362184|gb|EFP51035.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu011]
 gi|308365841|gb|EFP54692.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis
           SUMu012]
 gi|323719529|gb|EGB28655.1| hypothetical protein TMMG_01225 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903571|gb|EGE50504.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis
           W-148]
 gi|328458743|gb|AEB04166.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN
           4207]
          Length = 265

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 105/252 (41%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K   +  +        LG   + T +     +K        + Q ++V        +L++
Sbjct: 7   KAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMT 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
                +        L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+ 
Sbjct: 67  IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGAR 126

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            I EE+DA+R MG++ ++ L +PR+ A       L  +   + +IGA         +   
Sbjct: 127 TIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAG 186

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            + +   +     ++   +IKA       G++A  +G +VG     +G+ V   VV +  
Sbjct: 187 AWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFI 246

Query: 356 IVIIIDSLFAIF 367
           ++ +I+ +    
Sbjct: 247 VLFVINIVVTAV 258


>gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1]
 gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 15/263 (5%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
             +S          ++    N   +Q    G  + + G             + LIR +  
Sbjct: 5   RPHSQFPWLKSQFARVADPWNHIGTQTKFYGRTLRSVGYVFTHYG------VELIRIIAQ 58

Query: 163 VGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +G+           V +V  ++  TGA++A QG    S+ G E  +  + +   +R I  
Sbjct: 59  MGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYSDFSELGVEALTGFVSAYFNVRLIAP 118

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
             TA+ ++   G+   A++G+M+INEEIDA+  MG+  +  L S R+ A  + +  L  +
Sbjct: 119 ATTAIALSATIGAGATAQLGAMRINEEIDALEVMGIRSIAFLASSRVIAGFLVVIPLYCV 178

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
               A   A       Y     V+   F +     ++     +   ++  I +V    G+
Sbjct: 179 GVLMAFWAARFGTTVIYGQSTGVYDHYFKTFLNPTDLMWSFGQCIALSVIIMLVHTYYGY 238

Query: 334 AVGVHSNSLGKKVTTCVVQSISI 356
                   +G+ V   V  S+ +
Sbjct: 239 TARGGPAGVGEAVGRAVRTSLIV 261


>gi|41407947|ref|NP_960783.1| hypothetical protein MAP1849 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254775059|ref|ZP_05216575.1| hypothetical protein MaviaA2_10356 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41396301|gb|AAS04166.1| hypothetical protein MAP_1849 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 286

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 45  VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  VR L
Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A ++    LT +  F+    + +    + +     F S F S AT  ++   L+
Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMILALL 224

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV++I +++I++   +  Y  +
Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280


>gi|254819658|ref|ZP_05224659.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 281

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 6/254 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178
                H+L   +        +  ++ G  L L+  +        VG     V +++    
Sbjct: 21  IIRLGHLLVFFVRAAVAVPLAVRQYSGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGMTV 80

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L   G    +  + S++  RE+  L+ ++  A + G    A++GSM+I 
Sbjct: 81  GALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 140

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A ++++  L         +   +V+          + 
Sbjct: 141 EEIDALESIAIRPIPYLVTTRLIASVVAIIPLYAACLAIGYLSTQVVVGIGSGGSTGSYL 200

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       +I   LIKA         +    G+        +G      +  SI++VI
Sbjct: 201 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 260

Query: 359 IIDSLFAIFYFAIG 372
           I++ L  +  + + 
Sbjct: 261 IVNMLLTMALWGVD 274


>gi|226365582|ref|YP_002783365.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226244072|dbj|BAH54420.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 269

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 103/242 (42%)

Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            ++G  I+          + K     L+ Q + +        +L+    G +IA      
Sbjct: 21  ALIGFSIATAVAAVRVVVRRKLAWRELLDQAWRIASVTSAPALLLMIPIGVLIAVTIGSL 80

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
             Q GAE ++  ++  + + +   L+ A+M+AG  GSAI A++GS  I EE++A+  +GL
Sbjct: 81  AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D +  L+ PR+ A +I    L  +     +    +      +     F +       L++
Sbjct: 141 DVIERLVVPRVLAAVIVGVALCAMVTAVGVSACFLFQVVVQNSSAGSFLAALSQYTRLSD 200

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
               L+K+   A    +VA  +G       + +   V   VV +  +V I++++ +  Y 
Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260

Query: 370 AI 371
            +
Sbjct: 261 VL 262


>gi|183980210|ref|YP_001848501.1| integral membrane protein YrbE6B [Mycobacterium marinum M]
 gi|183173536|gb|ACC38646.1| conserved hypothetical integral membrane protein YrbE6B
           [Mycobacterium marinum M]
          Length = 288

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 106/254 (41%), Gaps = 6/254 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178
                H++   +        +  +++   + L+  +        VG   V VV+++    
Sbjct: 28  LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITWGNGSIVVGGGTVGVVLVLGITA 87

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G       + S++  RE+  ++ A+  A ++G     +IG+M++ 
Sbjct: 88  GALVAIEGYNFLNMMGIGPAIGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  M +  +  L++ R+ A  +++  L I     + +   +++          + 
Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPYL 207

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       ++   +IKA        +V    GF        +G      +  SI++VI
Sbjct: 208 HYFTMLIDARDVGYSVIKAVVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVVI 267

Query: 359 IIDSLFAIFYFAIG 372
           I++ +  +  +++ 
Sbjct: 268 IVNMVLTMALWSVD 281


>gi|118467326|ref|YP_879397.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|254773147|ref|ZP_05214663.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118168613|gb|ABK69510.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 285

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 108/265 (40%), Gaps = 8/265 (3%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
                 +G  +V F+    +   +L    +      ++     G +         VG   
Sbjct: 22  AAPTMRLGHMLVFFVRAVLAVPTVLRQYRTEFLRLLSNIAWGNGSI--------VVGGGT 73

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
             V +++ F  GA++A +G   L+  G    +  + S++  RE+  ++ ++  A ++G  
Sbjct: 74  AGVAVVLGFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCR 133

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+I EEIDA+ ++ +  +  L++ R+ A +I++  L I       +   +V  
Sbjct: 134 FTAQLGAMRIAEEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVAN 193

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                    +   F    +  +I   ++K          V    GF        +G    
Sbjct: 194 IISGGSIGPYLHYFTMMLSAKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAG 253

Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372
             +  SI++VI+++ L  +  ++I 
Sbjct: 254 HAMRASITVVIMVNMLLTMALWSID 278


>gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS]
 gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS]
 gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS]
 gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSG-------- 167
           ++V       S    LG  I   G   A +          ++R +  + +          
Sbjct: 13  RVVSQFRKPASLVGRLGDHILFYGRALAGTPHAAMHYRKEIVRLIAEISMGAGTLAMIGG 72

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+
Sbjct: 73  TVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 132

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEE+DA+ TMG+  +  L+S RI A +I++  L  +A   + + + +  
Sbjct: 133 GVTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSVAVILSFLASQLTT 192

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F++     ++    ++A  MA  +  +    G+        +G  V
Sbjct: 193 VVLFGQSGGLYDHYFNTFLNPVDLLWSFLQAILMALTVLFIHTYFGYFATGGPAGVGVAV 252

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  S+ +V+ +  L ++
Sbjct: 253 GNAVRTSLIVVVAVTLLVSL 272


>gi|215425374|ref|ZP_03423293.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T92]
 gi|215433087|ref|ZP_03431006.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis
           EAS054]
 gi|219555965|ref|ZP_03535041.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T17]
 gi|260199170|ref|ZP_05766661.1| hypothetical protein MtubT4_03250 [Mycobacterium tuberculosis T46]
 gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T46]
 gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T17]
 gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T92]
 gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T46]
 gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T17]
 gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis
           T92]
 gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 265

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 101/245 (41%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
           +   +   ++G           + +++       I Q +++   G    I++S     ++
Sbjct: 13  DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
                  L+QFGA   S    +I  + ++G L T +++AG   +AI A++G+  I EEID
Sbjct: 73  IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+D +  L+ PR+ A ++   LL  L     ++G  +      ++    + +   
Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
               L  +    IKA       G+V    G  V   S  LG  V   VV  +  +  ++ 
Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252

Query: 363 LFAIF 367
           +    
Sbjct: 253 ILTTI 257


>gi|145220617|ref|YP_001131295.1| hypothetical protein Mflv_0011 [Mycobacterium gilvum PYR-GCK]
 gi|145213103|gb|ABP42507.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 285

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 104/254 (40%), Gaps = 6/254 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY------YVGVSGVPVVILISFVT 178
                H+L   +        +   ++   + L+  +        VG     V I++    
Sbjct: 25  IIRLGHMLVFFVRALLGIPVAISHYRKEFVRLLSDIAWGNGSLVVGGGTAGVAIVLGITV 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++  +G   L   G    +  + S++  RE+  +  ++  A ++G    A++GSM+I 
Sbjct: 85  GALVGIEGYNFLDMLGLGPATGIISSLVNTRELAPIAASLAFATQAGCRFTAQLGSMRIA 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++G+  +  L++ R+ A +I++  L ++    + +    V+          + 
Sbjct: 145 EEIDALESLGIRPIPYLVTTRLMASVIAVIPLYVVCLAVSYLTTQAVVMVISGGSTGSYM 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F    +  +I   ++K          V    GF        +G      +  SI++VI
Sbjct: 205 HYFTLMLSGQDILYSVLKTVIFVWIASTVQCYYGFYASGGPVGVGVAAGHAMRASITVVI 264

Query: 359 IIDSLFAIFYFAIG 372
           +++ L  +  +++ 
Sbjct: 265 MVNMLLTMALWSVD 278


>gi|296165591|ref|ZP_06848116.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899064|gb|EFG78545.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 230

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 91/200 (45%)

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           + ++ ++    GA++A +    L+  G    S  +     +RE+  L+T V  A ++G  
Sbjct: 19  ISILTILGVTIGAMVAIEAYATLNLIGLGALSGIIGGWGNIREMAPLVTGVAFASQAGCR 78

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
           + AEIGSM+I +EIDA  +MGL  +  ++  R+   +I +    +L    A   + +VI 
Sbjct: 79  MTAEIGSMRIADEIDATESMGLRSIPFVVGTRLVGGMICVVPGFLLELMVAFFTSDLVIR 138

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             Y+ P   +   F    +  +I   LIKA     A  ++    G+        +G+   
Sbjct: 139 VSYNQPAGTYNHYFVQFLSPTDIGYSLIKAIIYCAAATLIHCYYGYFASGGPVGVGQASG 198

Query: 348 TCVVQSISIVIIIDSLFAIF 367
             +  S+  ++++D +  + 
Sbjct: 199 RAIRASLVTIMVLDIMTTVM 218


>gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014010|dbj|BAD55380.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 263

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 97/230 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G     + +   +S +        I Q +++    +   +L++     +++     
Sbjct: 18  LRAVGGFFELSADVARASVRRPFQAREFIDQSWFIARVSIVPTLLVAIPFTVLVSFTLNI 77

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G ++T +++AG   +AI A++G+  I EEIDA+R +G
Sbjct: 78  LLREIGAADLSGAGAAFGAVTQVGPIVTVLIVAGAGATAICADLGARTIREEIDAMRVLG 137

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PR+ A +    +L  L     I+G  +      D+    F +       L 
Sbjct: 138 INPVQRLVVPRVLASMFVALMLNSLVCTIGIVGGFLFSVYLQDVNPGAFVNGITLLTHLP 197

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
            +    +KA       G+VA   G  V     S+G  V   VV +   + 
Sbjct: 198 ELIISEVKAGLFGLIAGLVACYLGLNVKGGPKSVGDAVNQTVVFAFMALF 247


>gi|254818556|ref|ZP_05223557.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 285

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 106/254 (41%), Gaps = 6/254 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178
           +    H+L   +           +++   L L+  +        VG     V +++ F  
Sbjct: 25  TMRLGHMLVFFVRAVLAVPIVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G    +  + S++  RE+  ++ ++  A ++G    A++G+M+I 
Sbjct: 85  GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+ ++ +  +  L++ R+ A +I++  L I       +   +V           + 
Sbjct: 145 EEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYL 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F    +  +I   ++K          V    GF        +G      +  SI++VI
Sbjct: 205 HYFTMMLSTKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVI 264

Query: 359 IIDSLFAIFYFAIG 372
           +++ L  +  ++I 
Sbjct: 265 MVNMLLTMALWSID 278


>gi|206889329|ref|YP_002249685.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741267|gb|ACI20324.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 223

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 1/212 (0%)

Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
            +RQ+Y+ G+  VP V +   + G +I  Q A      G+      ++  L L+EIG   
Sbjct: 8   FLRQIYFTGIQAVPAVTISGLLIGLIIVLQTASIAGT-GSSNMIGKILLWLVLKEIGPFF 66

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T ++I  RSGSAI  E+ +MK+  EI+ +  MG+     LI PR++ ++ S  +L+I   
Sbjct: 67  TGLIILTRSGSAIATELATMKLGREIEYLEAMGIKPEVYLIKPRLYGVVCSAVILSIYFQ 126

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            +A+ G   +      IPF+ + +      ++  I    +K+      I ++ + +G +V
Sbjct: 127 LTAMFGGVFLATLMSGIPFSDYANAIVFHLSIKEIVISFLKSLIFGFLISLICIWQGLSV 186

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                 + ++ T  V  S+  + +ID +  + 
Sbjct: 187 MKSPTEIPQRATKAVTGSLFSLFLIDVIIDVI 218


>gi|118619946|ref|YP_908278.1| integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99]
 gi|118572056|gb|ABL06807.1| conserved hypothetical integral membrane protein YrbE6B
           [Mycobacterium ulcerans Agy99]
          Length = 288

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 107/254 (42%), Gaps = 6/254 (2%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178
                H++   +        +  +++   + L+  +        VG   V VV+++    
Sbjct: 28  LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITWGNGSIVVGGGTVGVVLVLGITA 87

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G    +  + S++  RE+  ++ A+  A ++G     +IG+M++ 
Sbjct: 88  GALVAIEGYNFLNMMGIGPATGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  M +  +  L++ R+ A  +++  L I     + +   +++          + 
Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPYL 207

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F       ++   +IKA        +V    GF        +G      +  SI++VI
Sbjct: 208 HYFTMLIDARDVGYSVIKAAVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVVI 267

Query: 359 IIDSLFAIFYFAIG 372
           I++ +  +  +++ 
Sbjct: 268 IVNMVLTMALWSVD 281


>gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 [Mycobacterium gilvum PYR-GCK]
 gi|315443151|ref|YP_004076030.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145215173|gb|ABP44577.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315261454|gb|ADT98195.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 255

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 104/239 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   S   +   +  K        I Q ++V    +   ++++     ++      
Sbjct: 11  MRAFGGFFSMALDTFVAMVKPPFAWREFISQSWFVARVSIVPTLMLTIPYTVLLTFTFNI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FGA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 71  LLTEFGAADFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ ++ L+ PR+ A  +    L+       + GA        ++    F +         
Sbjct: 131 VNPIQALVVPRVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLIIGAT 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA     + G++A  +G +VG     +G  V   VV +   +  I+ +    
Sbjct: 191 DVIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVATAV 249


>gi|169631591|ref|YP_001705240.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243558|emb|CAM64586.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 285

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 8/268 (2%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N  +      G  +  F         +L           +      G L         VG
Sbjct: 19  NRIRRPLMRFGHMVAFFFRALSGIPVVLRQYSKEFLRHLSDIAWGNGSL--------VVG 70

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
                V +++    GA++A +    L   G    +  + S+   RE+  ++ ++  A ++
Sbjct: 71  GGTAGVALVLGVTAGALVAIESYNFLDLLGLGPATGIISSLASTRELAPIMASLAFAMQA 130

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G    A++GSM+I EEIDA+ ++ +  +  L++ R+ A II++  L +     + +   +
Sbjct: 131 GCRFTAQLGSMRIAEEIDAMDSVAIRPIPFLVTTRLMAAIIAVIPLYLACLAISYVSCQV 190

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           ++          +   F    +  +I   +IK          V    GF        +G 
Sbjct: 191 MVGILSGGSVGSYLHYFGIGVSGIDIVYSIIKTVVFVWIASTVQCYYGFYASGGPEGVGI 250

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAIG 372
                +  +I++V++++ L  +  +++ 
Sbjct: 251 AAGHAMRAAITVVVMVNMLLTMALWSVD 278


>gi|118462658|ref|YP_881590.1| hypothetical protein MAV_2390 [Mycobacterium avium 104]
 gi|118163945|gb|ABK64842.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 286

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 104/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 45  VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  VR L
Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A ++    LT +  F+    + +    + +     F S   S AT  ++   L+
Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTSASFATTGDMILALL 224

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV++I +++I++   +  Y  +
Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280


>gi|296138973|ref|YP_003646216.1| hypothetical protein Tpau_1246 [Tsukamurella paurometabola DSM
           20162]
 gi|296027107|gb|ADG77877.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 285

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 5/251 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-MYYVGVSGVPVVILISF 176
           +V  I        +L   +           + +      + Q  Y +GV+  P + LI+ 
Sbjct: 29  VVDSIRTMGRAVRML---VLTLVSMVTDIVRGQLQWKETLYQTWYMIGVTAFPGI-LIAI 84

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G VI+ Q    + Q GA+  S     +  + +   + T +++AG   SAI A++G+  
Sbjct: 85  PFGIVISIQVGNIIHQLGADSLSGAAGGLAVIAQGAPIATGLLLAGAGASAIAADLGART 144

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I EE DA+R MG++ +  L+ PR+ A  I  PLL +L      I   +V      +    
Sbjct: 145 IREETDAMRVMGINPINRLVVPRLLAAWIVSPLLNLLIIGVGTIAGYLVAVGGQGVTPGA 204

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           ++  F S A   +++  L+K+      I I+  + G      S  +   V   VV S  +
Sbjct: 205 YWLSFGSFAHPIDVWISLVKSIIFGTIIAIIGCQRGLEAKGGSRGVADGVNATVVLSFVV 264

Query: 357 VIIIDSLFAIF 367
           +  ++ L    
Sbjct: 265 IFAVNLLITQI 275


>gi|311743966|ref|ZP_07717772.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311313096|gb|EFQ83007.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 275

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 105/254 (41%), Gaps = 7/254 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL-----I 174
             +    +Q    G  I +                 L+   +  G   V    +     +
Sbjct: 13  SMLALVGTQMTFAGRAIGSIPMTLRHYRA--EVFRILLDISWGTGALLVGGGTVGVMVLL 70

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +   G  +  +G   L   G    +  + +++  RE+  L+ A+ +A + G    A++GS
Sbjct: 71  AVSAGTSLGIEGFNGLETIGLAPLTGFISAVVNTRELAPLVAALALAAQVGCRFTAQLGS 130

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+ +EEIDA+  M +  +  L++ R+ A ++++  L ++    + + + + +   +  P 
Sbjct: 131 MRTSEEIDALSVMAVPAIPYLVTTRLIASMLAILPLYMIGLVGSYLASQLAVTVLFGQPV 190

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             +   F +   L +I   ++K    A A+ ++    GF     +  +G+     +  SI
Sbjct: 191 GTYQHYFGTFIALEDIALSIVKVLVFAFAVTLIHCWYGFMASGGAEGVGEATGRAIRASI 250

Query: 355 SIVIIIDSLFAIFY 368
            +V++++ +  + +
Sbjct: 251 VVVVLLNMILTLVF 264


>gi|169631108|ref|YP_001704757.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169243075|emb|CAM64103.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 292

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 111/282 (39%), Gaps = 7/282 (2%)

Query: 92  KIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151
                         +     ++  K           Q   +GLV++   +      +  G
Sbjct: 2   ATSRPSRYFPDELPAAVRSVWNFTKGAGGSAEYLGHQITFVGLVLAAIPQTLKRYRRQTG 61

Query: 152 FLLSLIRQMYYVG-----VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
            L  L+   +  G        + V++ +    GA +   G   L   G    +  + + +
Sbjct: 62  IL--LVDMTWGNGSIIVGGGVIGVLVFMGIAVGASVGIVGFSTLDMVGMGSLTGFISAYV 119

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
             RE+  ++ A+  A ++G  + AEIG+M+I+EEIDA+   G+  +  +++ R+ A II 
Sbjct: 120 NTREMAPMIAAIGFAAQAGCRMTAEIGAMRISEEIDALEAQGIRSIPFVVTTRVIAGIII 179

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +  L +L    A    + +++  ++    V+   F S     ++   +IKA      I  
Sbjct: 180 IVPLYVLTLLLAYGSCAFMVFFVHNQSQGVYKHYFDSFVHPVDVLYSVIKAVVFVVIIIA 239

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           +   +G+  G     +G      +  S+  V++ D L  + +
Sbjct: 240 IQCYQGYYAGGGPEGVGMASGRAIRASLVAVVLFDMLLTLLF 281


>gi|328951866|ref|YP_004369200.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452190|gb|AEB08019.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM
           11109]
          Length = 274

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 120/244 (49%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S A+I GL             +++       RQ+Y +G  G P+V L   + G  I    
Sbjct: 31  SLANIFGLFYRLLTLGLVGMTRYRLIRREFARQIYLIGGRGWPIVALTGMLLGLAIIVYA 90

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
           + QL++ G E F  +L+ I+ +RE+G +LTA+++  RSG+A++ EIG M +  EI+A+  
Sbjct: 91  SAQLAKIGGEQFVGNLLVIIVIRELGPVLTALLVLLRSGAAMIVEIGGMVLEREIEALEL 150

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           MGL+   ++  PR W L+ISL  L  +    A+ G  +    + D+ + VF+  F +   
Sbjct: 151 MGLEPEIVIGGPRFWGLVISLITLYFIFVVCAVWGGFLFSQIFADMYWGVFWLSFVNALG 210

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
             ++     K       IG+VA+  G     H  S+  + +   V S+  + +I++  ++
Sbjct: 211 WPDLVLNFAKVVLFGMFIGVVAIYHGLQTADHWESIVAQTSRGAVISLLFLGLINTALSV 270

Query: 367 FYFA 370
            Y  
Sbjct: 271 LYNV 274


>gi|302327111|gb|ADL26312.1| putative ABC transporter, permease protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 262

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 9/247 (3%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           ++ L +         S+ FK    ++I Q ++ GV   P +  ++ + G V+       +
Sbjct: 4   LIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVIIYLFSLM 63

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
            + G       L+ ++ +RE+  + TA +IAGR+GS++   IGSM IN E+DA+ TMG++
Sbjct: 64  GKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDALATMGIN 123

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY---------DIPFAVFFSRF 301
            +R L+ P +    I++ ++ I+ + SAI    ++               I ++   +  
Sbjct: 124 PIRYLVMPSVIGGTIAMIIMNIIFSTSAIGAGFLLTKGIIFITGNAPNVQITWSYLSTEI 183

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
               T  +    ++K       I I A  +   +      + K  +  V+ S   ++  D
Sbjct: 184 IKALTKPDFVFAIVKPLIFGIIITINACYQALNIKRDIRQVPKATSRSVIMSFLYIVFTD 243

Query: 362 SLFAIFY 368
           +LF +++
Sbjct: 244 ALFLMYF 250


>gi|254819657|ref|ZP_05224658.1| hypothetical protein MintA_07029 [Mycobacterium intracellulare ATCC
           13950]
          Length = 280

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 39  VRTVQYFFVDLITGRFQWHEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 98

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 99  TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 158

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A ++    LT +  F+    + +    + +     F S F S AT  ++   L+
Sbjct: 159 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMVLALL 218

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + IV+ ++G +       +   V   VV++I +++I++   +  Y  +
Sbjct: 219 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 274


>gi|284042176|ref|YP_003392516.1| hypothetical protein Cwoe_0708 [Conexibacter woesei DSM 14684]
 gi|283946397|gb|ADB49141.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 272

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 115/243 (47%), Gaps = 3/243 (1%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFL-LSLIRQMYYVGVSG-VPVVILISFVTGAVI 182
                  +G ++  TG+   S+ +         + Q  +      +P+++ ++ ++ +V 
Sbjct: 17  LRDALEEVGDMLILTGKTLVSAIRPPYPYGDEFVSQFMFALRQCFLPLILTMACISYSVP 76

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
             Q A  L  FGA      L  +  +RE   ++ A+++AG +G+AI A++G+ KI EE+D
Sbjct: 77  GLQAANFLMLFGALDRMGGLFVLAVIREFAPIVCAIVVAGAAGTAITADLGARKIREELD 136

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A++ +G+D V+ L+ PR  ALI    L  + A    I G  +      D     FF+ F 
Sbjct: 137 ALQVLGVDPVKNLVVPRFLALIAITALFDVFAIVFGITGG-LAATLLNDARIEPFFATFW 195

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           ++++  +++  L+K         IV   +G  V   +  +G+ V   +V +   + +++ 
Sbjct: 196 TSSSTTDLWGSLLKCTIFGGVTAIVCCYKGMTVSGGAAGVGRAVNQAIVIAFLAIGVVNY 255

Query: 363 LFA 365
           +F 
Sbjct: 256 VFT 258


>gi|171463508|ref|YP_001797621.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193046|gb|ACB44007.1| protein of unknown function DUF140 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 216

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 5/201 (2%)

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
            L S + G +++ Q A  + QFGA  F   L ++  +RE+G ++TA+++AGRS +A   E
Sbjct: 20  WLGSLLIGVILSFQAAIGMQQFGAVSFVGPLAALDIVREMGPIITAILLAGRSSAAFAVE 79

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG+M +N E+DA+    +     L+  RI A I+  P+LT+ A+  +I  + +     Y 
Sbjct: 80  IGTMTVNSEVDAL----VSGGYFLVVSRILAGILVAPILTLFADIVSIFSSML-TMLIYG 134

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           IPF  F++   S   + +I +GL+KA      I  +    G   G  + ++G   T  VV
Sbjct: 135 IPFVNFYNGMLSAVDVEDILSGLLKATLFGVVISAMGCLRGMQTGTGAAAVGISATRAVV 194

Query: 352 QSISIVIIIDSLFAIFYFAIG 372
            SI +++I+D +FA   +  G
Sbjct: 195 SSIVMIVIVDGIFAFISYKTG 215


>gi|183983837|ref|YP_001852128.1| YrbE family protein, YrbE5A [Mycobacterium marinum M]
 gi|183177163|gb|ACC42273.1| YrbE family protein, YrbE5A [Mycobacterium marinum M]
          Length = 289

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 102/232 (43%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 48  VRTIQYFFVDLVTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 107

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 108 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 167

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F     + +    + +     F + F S AT  ++F  L 
Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALF 227

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           KA      + +V+ ++G +       +   V   VV+SI +++I++   +  
Sbjct: 228 KAVIFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279


>gi|229494350|ref|ZP_04388113.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|229318712|gb|EEN84570.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 284

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 4/250 (1%)

Query: 123 NDSCSQAHILGLVISNTGEF----CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           N   +    +GL+ + T         S    +      + QM+++         L+    
Sbjct: 25  NMFSNLLSEIGLLFTFTVRVCVAAFTSLRHKRLAWREALDQMWFLAHVTSVASALVMIPL 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           G  +A Q      Q GA  +S  +++ L + + G L+ A++IAG  GSAI A++G+  I 
Sbjct: 85  GVGVALQIGALADQIGAGAYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIR 144

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +GL  +  L+ PR+ A+ +   LL  +     +  +  V     D     F 
Sbjct: 145 EEIDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFL 204

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
                 +  ++     IKA   A   GIVA  +G  V   +  +G  V   VV S  +V 
Sbjct: 205 RNLVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVF 264

Query: 359 IIDSLFAIFY 368
           + +     FY
Sbjct: 265 VANLAITQFY 274


>gi|226304168|ref|YP_002764126.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226183283|dbj|BAH31387.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 259

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 3/249 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
             +++          V              +      + QM+++         L+    G
Sbjct: 4   NLLSEIGLLFTFTVRVCVAAFTTLRHK---RLAWREALDQMWFLAHVTSVASALVMIPLG 60

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
             +A Q      Q GA  +S  +++ L + + G L+ A++IAG  GSAI A++G+  I E
Sbjct: 61  VGVALQIGSLADQIGAGSYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIRE 120

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+  +GL  +  L+ PR+ A+ +   LL  +     +  +  V     D     F  
Sbjct: 121 EIDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFLR 180

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359
                +  ++     IKA   A   GIVA  +G  V   +  +G  V   VV S  +V +
Sbjct: 181 NLVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVFV 240

Query: 360 IDSLFAIFY 368
            +     FY
Sbjct: 241 ANLAITQFY 249


>gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK]
 gi|315445484|ref|YP_004078363.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 282

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 16/267 (5%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG- 167
            L   +G+ +   +          G  ++          +       +IR +  + +   
Sbjct: 10  QLVRRLGRPV-DTLGGIGEHTAFYGRALAGVPHAVVHYRR------EIIRLVAEISMGAG 62

Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
                   V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + 
Sbjct: 63  TLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIG 122

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +A   G+ + A++G+M+INEEIDA+ TMG+  V  L+S RI A +I++  L  +A   + 
Sbjct: 123 LAATFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSF 182

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           + + +     +     ++   F +     ++    ++A  MA A+ +V    G+  G   
Sbjct: 183 LASKLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAGGGP 242

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +G  V   V  S+ +VI +  L ++
Sbjct: 243 SGVGVAVGNAVRTSLIVVISVTLLVSL 269


>gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S]
 gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S]
          Length = 275

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 100/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   + + +   + +         + Q ++V    +   +L++     +++     
Sbjct: 30  LRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 89

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+R +G
Sbjct: 90  LLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAMRVLG 149

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +         
Sbjct: 150 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLLTGFG 209

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G++A   G  V   + S+G  V   VV S   + +++ L    
Sbjct: 210 ELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 268


>gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [Mycobacterium vanbaalenii PYR-1]
 gi|119957756|gb|ABM14761.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 257

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 104/239 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   + + +     ++        + Q ++V    V   ++++     ++      
Sbjct: 12  VRALGGFFAMSLDTFILMFQRPFAFREYVIQTWFVARVSVLPALMLTMPYSVLLVFTFNI 71

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FGA  FS    +I  + +IG ++T ++++G   +A+ A++G+  I +E+DA+R MG
Sbjct: 72  LLNEFGASDFSGTGAAIGTVNQIGPIVTVLVVSGAGATAMCADLGARTIRDELDALRVMG 131

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PR+ A       L+       + GA +       +    F S         
Sbjct: 132 INPVQALVVPRVLAATTVALALSASVIIVGLAGAFLFCVYVQHVSAGAFISGLTLLTGAG 191

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   LIKA     A G++A  +G  VG     +G  V   VV +  ++  I+ +    
Sbjct: 192 DVVVSLIKATLFGAAAGLIACYKGVYVGGGPAGVGNAVNETVVFTFMVLFAINVIVTAV 250


>gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [Mycobacterium vanbaalenii PYR-1]
 gi|119958376|gb|ABM15381.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 255

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 105/239 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   S   +   + ++        I Q ++V    +   +L++     ++      
Sbjct: 11  VRAFGGFYSMALDTFVAMFQPPFAWREFISQAWFVARVSILPTLLLTIPYTVLLTFIETI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++ GA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 71  LLTEIGASDFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ ++ L+ PR+ A ++    L+       + GA   +    D+    F +         
Sbjct: 131 INPIQALVVPRVLAAMVVSLALSATVILVGLSGAYFFVVYIQDVSPGAFAAGLTLIIGAT 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA     + G++A  +G +V      +G  V   VV +   +  I+ +    
Sbjct: 191 DVVIALVKAALFGLSAGLIACYKGISVRGGPAGVGNAVNETVVFTFMALFAINIVATAV 249


>gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS]
 gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS]
 gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 285

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 107/267 (40%), Gaps = 5/267 (1%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
                   +     +G+      +        +G V   T  F     +    +      
Sbjct: 11  YPRLARGVRRPVDVLGR----LGDHMLFYIRAIGGVPHATLHFRKEIIRLIAEISMGAGT 66

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +  +G   + +V  ++   G  +A QG   L   G E  +  L + + +R     +  + 
Sbjct: 67  LAMIG-GTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIG 125

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +A   G+ + A++G+M+INEEIDA+ +M +  V  L+S RI A +I++  L  +A   + 
Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSF 185

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           + +       +     ++   F +     ++    ++A  MA  I +V    G+      
Sbjct: 186 VASQFTTVMLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGP 245

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +G  V   V  S+ +V+ +  L ++
Sbjct: 246 SGVGVAVGNAVRTSLILVVSVTLLVSL 272


>gi|54023081|ref|YP_117323.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014589|dbj|BAD55959.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 288

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 3/260 (1%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY--KFKGFLLSLI-RQMYYVGVSGV 168
              G  +++ I      A  +  V+S      +       +        R    VG   V
Sbjct: 18  VRRGGLVLRGIESFGFVAVFVWQVLSAVPLTLSRYRAETMRAITNMTWGRGSIVVGGGTV 77

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P+++++  V GA +  +    L   G    +  + +    RE+  +  AV  A ++G  I
Sbjct: 78  PMMVVLGLVMGASVGVESFATLDMLGMGPVTGIVSAYATTRELAPIAAAVGFAAQAGCRI 137

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AEIGSM+I+EEIDAI ++GL  V  +++ R+ A  +++    ++A   A      +I  
Sbjct: 138 TAEIGSMRISEEIDAIESLGLRSVPFVVTTRVIAGALAIVPTFLIALILAYAACRGLITL 197

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            +     V+   F    +  ++   +IK       + +V    GF        +G     
Sbjct: 198 LHGQSAGVYDHYFFQFVSGFDVIAAVIKVAVFGTVVILVHSYYGFFAKGGPEGVGIASGR 257

Query: 349 CVVQSISIVIIIDSLFAIFY 368
            V  S   +I ID + +I  
Sbjct: 258 AVRTSFVAIIAIDMVLSIVL 277


>gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 [Mycobacterium sp. JLS]
 gi|126236544|gb|ABN99944.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 257

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 106/239 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   + + +     ++        + Q ++V    +   I+++     +       
Sbjct: 13  MRALGGFFAMSLDAFVQMFRPPFAWREFLLQTWFVARVALFPTIMLAIPFTVLTVFTINV 72

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA  FS    ++  + +IG ++T ++IAG   +A+ A++G+  I EEIDA+R +G
Sbjct: 73  LLVEIGAADFSGTGAALGAVTQIGPIVTVLVIAGAGATAMCADLGARTIREEIDALRVLG 132

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ ++ L+ PRI A  +   +LT L     I+G+ I    + ++    F +         
Sbjct: 133 INPIQALVVPRIVAATVVSLMLTSLVTMVGIVGSFIFSVYFQNVTPGAFAAGLTLLVGTP 192

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   L+KA     A  ++A  +G +VG     +G  V   VV +   + +I+ +    
Sbjct: 193 EVVVNLLKAAIFGLAASLIACYKGISVGGGPQGVGNAVNETVVYTFMALFVINVIATAV 251


>gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M]
 gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 268

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 104/240 (43%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + + + +    +++        + Q ++V    +   +L++     +++     
Sbjct: 22  MQAVGGLFAMSADAIKFAFRRPFQWREFLEQSWFVARVAMLPTLLVAIPFTVLVSFTLNI 81

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 82  LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 141

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G  +      D+    F +       + 
Sbjct: 142 INPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 201

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G    G  + ++G  V   VV +   + +++ +    
Sbjct: 202 EVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 261


>gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS]
 gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 285

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 108/267 (40%), Gaps = 5/267 (1%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
                   +     +G+      +        +G V   T  F     +    +      
Sbjct: 11  YPRLARGVRRPVDVLGR----LGDHMLFYIRAIGGVPHATVHFRKEIIRLIAEISMGAGT 66

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +  +G   + +V  ++   G  +A QG   L   G E  +  L + + +R     +  + 
Sbjct: 67  LAMIG-GTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIG 125

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +A   G+ + A++G+M+INEEIDA+ +M +  V  L+S RI A +I++  L  +A   + 
Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSF 185

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           + +  V    +     ++   F +     ++    ++A  MA  I +V    G+      
Sbjct: 186 LASQFVTVMLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGP 245

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +G  V   V  S+ +V+ +  L ++
Sbjct: 246 SGVGVAVGNAVRTSLILVVSVTLLVSL 272


>gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [Mycobacterium vanbaalenii PYR-1]
 gi|119954754|gb|ABM11759.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 9/256 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-VGVSG-----VPV 170
            +    N   +Q    G  + + G+        +  +   I QM    G        + +
Sbjct: 19  GLAAGWNRIGTQTEFYGRTVRSIGDAVVHY---RTEIAVQIAQMSLGTGALAVVGGTIVI 75

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++   GA+IA QG   L+  G E  +    + L +R IG L T + +A   G+   A
Sbjct: 76  VGFLTMSAGALIAVQGYNTLAGVGVEALTGFASAYLNVRIIGPLTTGIGLAATIGAGATA 135

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+I EEIDA+  MG+  +  L S R+ A +I +  L  +A   + + A +     Y
Sbjct: 136 QLGAMRIAEEIDALEVMGVRSIAYLASTRLLAGMIVVIPLYCVAVLMSFVAARVGTTAIY 195

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                V+   F +     ++    ++A  MA  + ++    GF        +G+ V   V
Sbjct: 196 GQSTGVYDHYFTTFLNPLDLVWSFVQAIAMAVTVMVIHTYYGFNASGGPAGVGEAVGRAV 255

Query: 351 VQSISIVIIIDSLFAI 366
             S+ +V+ +  + ++
Sbjct: 256 RASLIVVVFVTLVISL 271


>gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str. MC2
           155]
 gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 281

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 15/272 (5%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
             +         ++ V             G  ++ T        +       +IR +  +
Sbjct: 3   VRTLHPRLTRELRRPVDVAGRLGDHTSFYGRALAGTPHAAMHYRR------EVIRLIAEI 56

Query: 164 GVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
            +           V +V  ++   G  +A QG   L   G E  +  L + + +R    +
Sbjct: 57  SMGAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPV 116

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +  + +A   G+ + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A
Sbjct: 117 VAGIGLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVA 176

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              +   +++     +     ++   F +     ++    ++A  MA AI +V    GF 
Sbjct: 177 VILSFAASNLTTVVMFGQSAGLYNHYFSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFF 236

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
                + +G  V   V  S+ +VI +  L ++
Sbjct: 237 AAGGPSGVGVAVGNAVRTSLIVVIAVTLLVSL 268


>gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 [Mycobacterium gilvum PYR-GCK]
 gi|145215579|gb|ABP44983.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 269

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 1/250 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   N        +G   S   +     +         + Q ++V    +   +L++   
Sbjct: 13  ISLPNGLSGAMQAVGGFFSMALDAVRFVFVRPFQWREFLEQSWFVAKVSMAPTLLVAIPF 72

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
             +++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I 
Sbjct: 73  TVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIR 132

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G         D+    F 
Sbjct: 133 EEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFA 192

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357
           +       +  +    +KA       G+VA   G    G  + ++G  V   VV +   +
Sbjct: 193 AGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMAL 252

Query: 358 IIIDSLFAIF 367
            +I+ +    
Sbjct: 253 FVINVVVTAI 262


>gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
 gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707]
          Length = 263

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 100/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   + + +   + +         + Q ++V    +   +L++     +++     
Sbjct: 18  LRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 77

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+R +G
Sbjct: 78  LLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAMRVLG 137

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +         
Sbjct: 138 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLLTGFG 197

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G++A   G  V   + S+G  V   VV S   + +++ L    
Sbjct: 198 ELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 256


>gi|315443550|ref|YP_004076429.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 269

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 1/250 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   N        +G   S   +     +         + Q ++V    +   +L++   
Sbjct: 13  ISLPNGVSGAMQAVGGFFSMALDAVRFVFVRPFQWREFLEQSWFVAKVSMAPTLLVAIPF 72

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
             +++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I 
Sbjct: 73  TVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIR 132

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G         D+    F 
Sbjct: 133 EEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFA 192

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357
           +       +  +    +KA       G+VA   G    G  + ++G  V   VV +   +
Sbjct: 193 AGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMAL 252

Query: 358 IIIDSLFAIF 367
            +I+ +    
Sbjct: 253 FVINVVVTAI 262


>gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99]
 gi|118571235|gb|ABL05986.1| conserved hypothetical integral membrane protein YrbE3A_1
           [Mycobacterium ulcerans Agy99]
          Length = 255

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 100/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   S   +   +           I Q ++V    +   ++++     ++      
Sbjct: 11  LRAFGGFYSMALDTFVAMVHPPFAWREYIAQAWFVARVSLLPTLMLTIPYTVLLTFIENI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++ GA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 71  LLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D ++ L+ PR+ A       L+       + GA         +    F +         
Sbjct: 131 VDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLIIGTT 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA     + G++A  +G +VG     +G  V   VV +   +  I+ +    
Sbjct: 191 DVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVATAV 249


>gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1]
 gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 282

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 110/267 (41%), Gaps = 16/267 (5%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG- 167
            L   IG+ +              G  ++          K       +IR +  + +   
Sbjct: 10  RLAQQIGRPVGALGR-IGDHTSFYGRALAGVPHAAMHYRK------EIIRLVAEISMGAG 62

Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
                   + +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + 
Sbjct: 63  TLAMIGGTIVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIG 122

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +A   G+ + A++G+M+INEEIDA+ TMG+  V  L+S RI A +I++  L  +A   + 
Sbjct: 123 LAATFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSF 182

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
             + +     +     ++   F +     ++    ++A  MA A+ +V    G+      
Sbjct: 183 AASKLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFATGGP 242

Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366
           + +G  V   V  S+ +VI +  L ++
Sbjct: 243 SGVGVAVGNAVRTSLIVVISVTLLVSL 269


>gi|118469944|ref|YP_887173.1| hypothetical protein MSMEG_2853 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171231|gb|ABK72127.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 270

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 105/252 (41%), Gaps = 1/252 (0%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +      + +    +G + + + +    +++        + Q ++V    +   +L++ 
Sbjct: 12  GLRVLRGGTSTTLEAIGGLFAMSSDAVRFAFRRPFQGREFLEQSWFVARVSLAPTLLVAI 71

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
               +++      L + GA   S    +   + ++G ++T +++AG   +A+ A++GS  
Sbjct: 72  PFTVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRT 131

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I +EIDA+  +G++ ++ L++PRI A  +   LL  L     I+G          +    
Sbjct: 132 IRDEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYTFSVFIQGVNPGA 191

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSIS 355
           F +       +  +    IKA       G+VA   G    G  + ++G  V   VV +  
Sbjct: 192 FAAGITLLTGVPEVIISCIKAMLFGFIAGMVACFRGLTIAGGGAKAVGNAVNETVVYAFM 251

Query: 356 IVIIIDSLFAIF 367
            + +++ +    
Sbjct: 252 ALFVVNVVVTAI 263


>gi|118619035|ref|YP_907367.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99]
 gi|118571145|gb|ABL05896.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99]
          Length = 289

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 102/232 (43%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 48  VRTIQYFFVDLVTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 107

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MGL  +R L
Sbjct: 108 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRL 167

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F     + +    + +     F + F S AT  ++F  L 
Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALF 227

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           KA      + +V+ ++G +       +   V   VV+SI +++I++   +  
Sbjct: 228 KAVMFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279


>gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3A_1 [Mycobacterium marinum M]
 gi|183177346|gb|ACC42456.1| conserved hypothetical integral membrane protein YrbE3A_1
           [Mycobacterium marinum M]
          Length = 255

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 100/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
               G   S   +   +           I Q ++V    +   ++++     ++      
Sbjct: 11  LRAFGGFYSMALDTFVAMVHPPFAWREYIAQAWFVARVSLLPTLMLTIPYTVLLTFIENI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++ GA  FS    ++  +R+IG ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 71  LLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D ++ L+ PR+ A       L+       + GA         +    F +         
Sbjct: 131 VDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLIIGTT 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L+KA     + G++A  +G +VG     +G  V   VV +   +  I+ +    
Sbjct: 191 DVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVATAV 249


>gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242694|dbj|BAH53042.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 254

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 101/239 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + +GE   + +         + Q ++V    +   +L++     +++     
Sbjct: 9   LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+R +G
Sbjct: 69  LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +         
Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G  V   + S+G  V   VV S   + +++ L    
Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247


>gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Rv]
 gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551]
 gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97]
 gi|121636505|ref|YP_976728.1| integral membrane protein YrbE2a [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660356|ref|YP_001281879.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra]
 gi|148821789|ref|YP_001286543.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis F11]
 gi|167969010|ref|ZP_02551287.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis H37Ra]
 gi|215402355|ref|ZP_03414536.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|215410128|ref|ZP_03418936.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425819|ref|ZP_03423738.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T92]
 gi|215444700|ref|ZP_03431452.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T85]
 gi|218752227|ref|ZP_03531023.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis GM
           1503]
 gi|219556429|ref|ZP_03535505.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T17]
 gi|224988977|ref|YP_002643664.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797521|ref|YP_003030522.1| hypothetical protein TBMG_00594 [Mycobacterium tuberculosis KZN
           1435]
 gi|254230927|ref|ZP_04924254.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis C]
 gi|254363545|ref|ZP_04979591.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549542|ref|ZP_05139989.1| hypothetical protein Mtube_03615 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185464|ref|ZP_05762938.1| hypothetical protein MtubCP_05434 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199592|ref|ZP_05767083.1| hypothetical protein MtubT4_05534 [Mycobacterium tuberculosis T46]
 gi|260203751|ref|ZP_05771242.1| hypothetical protein MtubK8_05499 [Mycobacterium tuberculosis K85]
 gi|289441976|ref|ZP_06431720.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T46]
 gi|289446140|ref|ZP_06435884.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552840|ref|ZP_06442050.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           605]
 gi|289568520|ref|ZP_06448747.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T17]
 gi|289573187|ref|ZP_06453414.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85]
 gi|289744301|ref|ZP_06503679.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|289749084|ref|ZP_06508462.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T92]
 gi|289756666|ref|ZP_06516044.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289760706|ref|ZP_06520084.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis GM 1503]
 gi|294996099|ref|ZP_06801790.1| hypothetical protein Mtub2_16765 [Mycobacterium tuberculosis 210]
 gi|297633081|ref|ZP_06950861.1| hypothetical protein MtubK4_03105 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730059|ref|ZP_06959177.1| hypothetical protein MtubKR_03150 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524074|ref|ZP_07011483.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774691|ref|ZP_07413028.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu001]
 gi|306781579|ref|ZP_07419916.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu002]
 gi|306783229|ref|ZP_07421551.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu003]
 gi|306787601|ref|ZP_07425923.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu004]
 gi|306794365|ref|ZP_07432667.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu005]
 gi|306796335|ref|ZP_07434637.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu006]
 gi|306802195|ref|ZP_07438863.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu008]
 gi|306806402|ref|ZP_07443070.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu007]
 gi|306966602|ref|ZP_07479263.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu009]
 gi|306970795|ref|ZP_07483456.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu010]
 gi|307078518|ref|ZP_07487688.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu011]
 gi|307083082|ref|ZP_07492195.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu012]
 gi|313657386|ref|ZP_07814266.1| hypothetical protein MtubKV_03140 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2222771|emb|CAB09951.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A
           [Mycobacterium tuberculosis H37Rv]
 gi|13880131|gb|AAK44840.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31617356|emb|CAD93464.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A
           [Mycobacterium bovis AF2122/97]
 gi|121492152|emb|CAL70617.1| Conserved hypothetical integral membrane protein yrbE2A
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599986|gb|EAY58996.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis C]
 gi|134149059|gb|EBA41104.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504508|gb|ABQ72317.1| conserved hypothetical integral membrane protein YrbE2a
           [Mycobacterium tuberculosis H37Ra]
 gi|148720316|gb|ABR04941.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis F11]
 gi|224772090|dbj|BAH24896.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253319024|gb|ACT23627.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414895|gb|EFD12135.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T46]
 gi|289419098|gb|EFD16299.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437472|gb|EFD19965.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           605]
 gi|289537618|gb|EFD42196.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85]
 gi|289542274|gb|EFD45922.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T17]
 gi|289684829|gb|EFD52317.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           02_1987]
 gi|289689671|gb|EFD57100.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           T92]
 gi|289708212|gb|EFD72228.1| hypothetical integral membrane protein yrbE2A [Mycobacterium
           tuberculosis GM 1503]
 gi|289712230|gb|EFD76242.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298493868|gb|EFI29162.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216590|gb|EFO75989.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu001]
 gi|308325673|gb|EFP14524.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu002]
 gi|308331897|gb|EFP20748.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu003]
 gi|308335684|gb|EFP24535.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu004]
 gi|308337263|gb|EFP26114.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu005]
 gi|308343188|gb|EFP32039.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu006]
 gi|308347055|gb|EFP35906.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu007]
 gi|308350998|gb|EFP39849.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu008]
 gi|308355632|gb|EFP44483.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu009]
 gi|308359587|gb|EFP48438.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu010]
 gi|308363515|gb|EFP52366.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu011]
 gi|308367196|gb|EFP56047.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           SUMu012]
 gi|323720939|gb|EGB30004.1| hypothetical protein TMMG_03290 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902419|gb|EGE49352.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis
           W-148]
 gi|328457304|gb|AEB02727.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN
           4207]
          Length = 265

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 89/240 (37%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G           +  +        I Q +++    +   + +S     +I     
Sbjct: 18  AVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLN 77

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L++FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  +
Sbjct: 78  ILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVL 137

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+D +  L+ PR+ A  I   LL        ++G  +       +    +         L
Sbjct: 138 GIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGL 197

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +   ++K+       G+V    G         +G  V   +V  +  +   + +    
Sbjct: 198 PEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTI 257


>gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 265

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 91/236 (38%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G           + ++        I Q +++    +   + ++     +I       L+
Sbjct: 22  VGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAIPLTVLIIFTLNILLA 81

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  +G+D 
Sbjct: 82  EFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEVLGIDP 141

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  I   LL        ++G  +       I    +         L  + 
Sbjct: 142 IHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITGLPEVV 201

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++K+       G+V    G         +G  V   +V  +  +  ++ +    
Sbjct: 202 ISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTTI 257


>gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395206|gb|AAS03075.1| hypothetical protein MAP_0758 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 281

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 98/242 (40%), Gaps = 7/242 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173
           V  +      A   G  +   G   A++   +  +  +       G        V +V  
Sbjct: 18  VALLAGIGDHALFYGKAL--AGMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGF 75

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++   G  +A QG   L   G E  +  L + + +R +  ++  + +A   G+ + A++G
Sbjct: 76  LTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIVAPVVAGIGLAATFGAGVTAQLG 135

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEE+DA+ +M +  V  L+S RI A ++++  L  +A   + + +           
Sbjct: 136 AMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQS 195

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             ++   F++     ++    ++A  MA  I ++    G+        +G      V  S
Sbjct: 196 QGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTS 255

Query: 354 IS 355
           + 
Sbjct: 256 LI 257


>gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 281

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 96/241 (39%), Gaps = 7/241 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILI 174
             +      A   G  +   G   A++   +  +  +       G        V +V  +
Sbjct: 19  ALLAGIGDHALFYGKAL--AGMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGFL 76

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G+
Sbjct: 77  TLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGA 136

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+INEE+DA+ +M +  V  L+S RI A ++++  L  +A   + + +            
Sbjct: 137 MRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQSQ 196

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++   F++     ++    ++A  MA  I ++    G+        +G      V  S+
Sbjct: 197 GLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTSL 256

Query: 355 S 355
            
Sbjct: 257 I 257


>gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104]
 gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 260

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 91/236 (38%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G           + ++        I Q +++    +   + ++     +I       L+
Sbjct: 17  VGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAIPLTVLIIFTLNILLA 76

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           +FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  +G+D 
Sbjct: 77  EFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEVLGIDP 136

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           +  L+ PR+ A  I   LL        ++G  +       I    +         L  + 
Sbjct: 137 IHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITGLPEVV 196

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             ++K+       G+V    G         +G  V   +V  +  +  ++ +    
Sbjct: 197 ISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTTI 252


>gi|315442435|ref|YP_004075314.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315260738|gb|ADT97479.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 284

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 100/257 (38%), Gaps = 9/257 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY------YVGVSGVPVVILIS 175
           +             +             +   + L+  +        VG     V I++ 
Sbjct: 24  VARLGHMLVFFVRALVAIPLALRHY---RAEFVRLLSDIAWGNGSLVVGGGTAGVAIVLG 80

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GA++  +G   L   G    +  + S++  RE+  +  ++  A ++G    A++GSM
Sbjct: 81  ITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIALSLAFATQAGCRFTAQLGSM 140

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I EEIDA+ ++ +  +  L++ R+ A ++++  L ++    + +   IV+         
Sbjct: 141 RIAEEIDALDSIAIRPIPYLVTTRLMASVVAVVPLYVVCLAVSYLTTQIVVRAISGGATG 200

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +   F    +  +I   L+KA         +    GF        +G      +  SI+
Sbjct: 201 SYMHYFTLMLSGQDILYSLLKAIIFVWIATTIQCYYGFYASGGPEGVGVAAGHAMRASIT 260

Query: 356 IVIIIDSLFAIFYFAIG 372
           +VII++ L  +  + I 
Sbjct: 261 VVIIVNMLLTMALWNID 277


>gi|222055776|ref|YP_002538138.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
 gi|221565065|gb|ACM21037.1| protein of unknown function DUF140 [Geobacter sp. FRC-32]
          Length = 257

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 4/258 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +GK I+K +         +     N         +    +  L +Q+Y+ G+  + 
Sbjct: 1   MITALGKWILKLLLTGMGLVETIIQAFRNLFLSFKQGRRP--IMAVLRKQIYFTGLESLK 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V+++IS   G VI  Q    +     E  +  ++  + +RE+G +LTA++I  RSG+AI 
Sbjct: 59  VIVIISVTIGIVIITQIISLVGA--NETLTGRVLVWVIIRELGPVLTAIIIIARSGTAIA 116

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
            E+G MKIN EI++I ++G+   R LI PRI  +  S+ +LTI    +AI+G  IV    
Sbjct: 117 TELGYMKINNEIESIESLGIPADRYLIMPRIIGVTTSVVILTIYFEIAAILGGFIVAAIG 176

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           + +PF  F     S  T+  +    IK+ F    +     + G  VG  +  + +  T  
Sbjct: 177 WHVPFDKFAQSIFSILTIKELGMSFIKSLFFGLFLSAACCRHGLGVGKSATQIPQAATKG 236

Query: 350 VVQSISIVIIIDSLFAIF 367
           V+QS+ +V ++D +  + 
Sbjct: 237 VMQSLFLVFVLDGVITLI 254


>gi|215429420|ref|ZP_03427339.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis
           EAS054]
 gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 265

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 89/240 (37%)

Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
               +G           +  +        I Q +++    +   + +S     +I     
Sbjct: 18  AVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLN 77

Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247
             L++FGA   S    ++  + ++G L T ++IAG   +AI A++G+  I EEIDA+  +
Sbjct: 78  ILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVL 137

Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307
           G+D +  L+ PR+ A  I   LL        ++G  +       +    +         L
Sbjct: 138 GIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGL 197

Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +   ++K+       G+V    G         +G  V   +V  +  +   + +    
Sbjct: 198 PEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTI 257


>gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN]
 gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923]
 gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae]
 gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923]
          Length = 267

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 97/239 (40%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             ++G           + ++        I Q +++        +++S     ++      
Sbjct: 21  LVLVGGFFRMLVLTGKALFRRPFQWREFILQCWFIMRVAFLPTVMVSIPLTVLLIFTLNV 80

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+QF A   S    +I  + ++G L T +++AG   ++I A++G+  I EEIDA+  +G
Sbjct: 81  LLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADLGARTIREEIDAMEVLG 140

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A  +   LL  L     ++G  +      ++    + +   +   L 
Sbjct: 141 IDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLP 200

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+V    G  V   SN LG  V   VV  +  +  ++ +    
Sbjct: 201 EVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVLCVVALYAVNVVLTTI 259


>gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
 gi|118172284|gb|ABK73180.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155]
          Length = 287

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 11/258 (4%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV------- 168
           + + K ++    QA   G  +           +++   + L+ +M  +G   +       
Sbjct: 21  RGVPKTVDTVGEQALFYGETMRYLPNAFT---RYRKETIRLVAEM-TMGAGALVMIGGTV 76

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+  
Sbjct: 77  GVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGA 136

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G+M++ EEIDA+ +M +  V  L+S R+ A +I++  L  L+  +A   A      
Sbjct: 137 TAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLLAGLIAIVPLYSLSVLAAFFAARFTTVF 196

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
                  ++   F++    +++    ++A  MA A+ +V    G+        +G  V  
Sbjct: 197 INGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGPVGVGIAVGQ 256

Query: 349 CVVQSISIVIIIDSLFAI 366
            V  S+ +V+ I    ++
Sbjct: 257 AVRTSLIVVVTITLFISL 274


>gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 281

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 97/242 (40%), Gaps = 7/242 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173
           V  +      A   G  +   G   A++   +  +  +       G        V +V  
Sbjct: 18  VALLAGIGDHALFYGKAL--AGMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGF 75

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G
Sbjct: 76  LTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLG 135

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEE+DA+ +M +  V  L+S RI A ++++  L  +A   + + +           
Sbjct: 136 AMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQS 195

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             ++   F++     ++    ++A  MA  I ++    G+        +G      V  S
Sbjct: 196 QGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTS 255

Query: 354 IS 355
           + 
Sbjct: 256 LI 257


>gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC
           12478]
          Length = 247

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + + + +     ++        + Q ++V    +   +L++     +++     
Sbjct: 1   MQAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVSMAPTLLVAIPFTVLVSFTLNI 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 61  LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G  +      D+    F +       + 
Sbjct: 121 INPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSVFVQDVNPGAFAAGITLLTGVP 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G  V G  + ++G  V   VV +   + +++ +    
Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240


>gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [Mycobacterium vanbaalenii PYR-1]
 gi|119958172|gb|ABM15177.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 250

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 109/243 (44%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                  LG + + + +      +        +RQ ++V    +   +L++     ++  
Sbjct: 2   LTRSLQGLGGLFAMSVDTMVLLSRRPFAWQEFLRQSWFVARVSLLPTLLLAIPFSVLLVF 61

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
                L++FGA  FS    +   + +IG ++T +++AG   +A+ A++G+  I +EIDA+
Sbjct: 62  TFNILLTEFGAADFSGTGAAYGAVTQIGPIVTVLVVAGAGATAMCADLGARTIRDEIDAM 121

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
           R MG++ ++ L+ PR+ A      +L+      +++G+ +      ++    F +     
Sbjct: 122 RVMGINPLQALVLPRVLAASFVAVMLSSAVILVSLVGSYVFGVFIQNVTPGAFAAGMTLL 181

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
             + ++   LIKA       G++A  +G +VG     +G  V   VV +   +  I+ + 
Sbjct: 182 TGVGDVVVALIKAAMFGLCAGLIACYKGLSVGGGPAGVGLAVNETVVFTFMALFGINIVT 241

Query: 365 AIF 367
           +  
Sbjct: 242 SAV 244


>gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 [Rhodococcus jostii RHA1]
 gi|110821198|gb|ABG96482.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 254

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 101/239 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + +GE   + +         + Q ++V    +   +L++     +++     
Sbjct: 9   LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA+R +G
Sbjct: 69  LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A  +   LL  L     I+G  +      D+    F +         
Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G  V   + S+G  V   VV S   + +++ L    
Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247


>gi|284043171|ref|YP_003393511.1| hypothetical protein Cwoe_1709 [Conexibacter woesei DSM 14684]
 gi|283947392|gb|ADB50136.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684]
          Length = 264

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 3/246 (1%)

Query: 126 CSQAHILGLVISNTGEFCA--SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
                  G ++  T          +   F    +RQ   + +S   V+  + F+ G    
Sbjct: 8   RGWVESFGDIVRFTMRMFGEVYGGRVFRFFGEALRQAGLLILSSTLVIWGLVFIIGLQCG 67

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            +GA+     G   ++    +   LRE+       M+A + G+ IVAEIGSM+I EEIDA
Sbjct: 68  IEGAYFTRGTGTPNYAGVFTAWCDLRELVPYAFGYMMAAKVGTGIVAEIGSMRITEEIDA 127

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY-YDIPFAVFFSRFH 302
           +  MG+  +  L   R+ A  + LP + I    +A I + + +    +++    +   F 
Sbjct: 128 LEVMGISSMTFLCGTRLLASWMVLPFVYIGGVGAAFIASYLAVVVQIHEVSAGGYELIFW 187

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +     ++   L+K  FMA  I +V    G+        +G      +V ++  V +I  
Sbjct: 188 AFQNPTDLLYSLLKGAFMATGIVVVGCYYGYNASGGPVGVGTATAKSMVVNLVYVHLIGM 247

Query: 363 LFAIFY 368
           +    +
Sbjct: 248 MGTQLF 253


>gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [Mycobacterium vanbaalenii PYR-1]
 gi|119954204|gb|ABM11209.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 256

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 106/239 (44%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + + +   +  +        + Q ++V    V   ++++     ++      
Sbjct: 11  LRGVGGFFAMSIDTFVAMVRPPFAFREYVLQSWFVARVSVLPALMLTLPYSVLLVFTFNI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  F+    +I  + +IG ++T ++++G   +A+ A++G+  I EE+DA++ MG
Sbjct: 71  LLKEFGAADFAGTGAAIGTVSQIGPIVTVLVVSGAGATAMCADLGARTIREELDAMKVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ ++ L+ PR+ A       L+     + + GA        ++    F S        A
Sbjct: 131 INPIQALVVPRVLAATTVALALSATVIIAGLAGAFFFCVFVQNVSAGAFISGMTLLTGAA 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++F  L KA     A G++A  +G +VG     +G  V   VV +  ++  I+ +    
Sbjct: 191 DVFVSLAKATLFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFMVLFAINVIATAV 249


>gi|183980209|ref|YP_001848500.1| integral membrane protein YrbE6A [Mycobacterium marinum M]
 gi|183173535|gb|ACC38645.1| conserved hypothetical integral membrane protein YrbE6A
           [Mycobacterium marinum M]
          Length = 281

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           ++            +      IRQ  ++  + +   IL++   GA ++ Q A    Q GA
Sbjct: 40  VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ A+++A   GSAI A++G   + EE DA+  MG+  VR L
Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEVMGVSVVRNL 159

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A ++    L  +  F   + + +            F + F + AT  ++   L+
Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +VA ++G +       +   V   VV+++ +++I++ + +  Y  +
Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275


>gi|118619947|ref|YP_908279.1| integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99]
 gi|118572057|gb|ABL06808.1| conserved hypothetical integral membrane protein YrbE6A
           [Mycobacterium ulcerans Agy99]
          Length = 281

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 105/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           ++            +      IRQ  ++  + +   IL++   GA ++ Q A    Q GA
Sbjct: 40  VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ A+++A   GSAI A++G   + EE DA+  MG+  VR L
Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEMMGVSVVRNL 159

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A ++    L  +  F   + + +            F + F + AT  ++   L+
Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + +VA ++G +       +   V   VV+++ +++I++ + +  Y  +
Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275


>gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS]
 gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 280

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 7/261 (2%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV----- 165
              + + +   ++    QA   G  I             K  +  +       G      
Sbjct: 9   LRRVFRWVPGAVDTVGEQALFYGETIRYIPNALTRYR--KETIRLIAEMTMGAGALVMIG 66

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G
Sbjct: 67  GTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIG 126

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M++ EEIDA+ TM +  V  L+S R+ A +I++  L  L+  +A   A   
Sbjct: 127 AGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARFT 186

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     ++   F++    +++    ++A  M+ A+ +V    G+        +G  
Sbjct: 187 TVFINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIA 246

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +V+ I    ++
Sbjct: 247 VGQAVRTSLIVVVTITLFISL 267


>gi|296394454|ref|YP_003659338.1| hypothetical protein Srot_2051 [Segniliparus rotundus DSM 44985]
 gi|296181601|gb|ADG98507.1| protein of unknown function DUF140 [Segniliparus rotundus DSM
           44985]
          Length = 280

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 4/256 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS----SYKFKGFLLSLIRQMYYVGVSGVPVV 171
           + +    +   +    LG       +        S   +  L   IRQ +++        
Sbjct: 15  RFVSYLFDTVLTSLRTLGRWFMLAADAFRYLVVDSVMLRYPLRETIRQCWFITSVTALPS 74

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           +L+S   G ++  Q      Q GA   +     +  +R+   ++ A+++ G +GSAI A+
Sbjct: 75  LLVSIPFGVIVMVQVGNITQQVGAASLTGAAGGLAVIRQGAPIVAALLLGGAAGSAIAAD 134

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+  I EEIDA+R +G++  + L++PR+ A+++  PLL +   F  +    I+   Y D
Sbjct: 135 LGARTIREEIDAMRVIGINPTQRLVAPRLAAMLLVAPLLCLFIVFITMAAGYILAVMYQD 194

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    +     + A L++++  + KA F    + ++A + G         + + V   VV
Sbjct: 195 VTPGSYLGSLGAFAKLSDVYVAVGKALFFGVVVVVIACQRGLETKFGPRGVAESVNAAVV 254

Query: 352 QSISIVIIIDSLFAIF 367
             +    +++ +    
Sbjct: 255 LGVLSTFVLNVVATQI 270


>gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 287

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 98/240 (40%), Gaps = 10/240 (4%)

Query: 126 CSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG---------VPVVILIS 175
                 +G      G+  A   +  + +   +IR +  + +           + +V  ++
Sbjct: 24  VGTLGRIGDHTLFYGKALAGVPFAVRHYRREVIRLIAEISMGAGTLAMIGGTLVIVGFLT 83

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G+M
Sbjct: 84  LAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLGAM 143

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +INEEIDA+ +M +  +  L+S RI A ++++  L  +A   + + +       +     
Sbjct: 144 RINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSIAVILSFLASQFTTVVLFGQSGG 203

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
           ++   F +     ++    ++A  MA  I ++    G+        +G      V  S+ 
Sbjct: 204 LYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTSLI 263


>gi|319948072|ref|ZP_08022243.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4]
 gi|319438260|gb|EFV93209.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4]
          Length = 254

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 98/236 (41%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G   + T +   S           I Q +++        +L++     +++      L 
Sbjct: 12  IGEFFAMTLDTFVSFPSIVRQGREFIEQSWFIARVSTMATVLVAIPFTVLVSFTLNILLR 71

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S    ++  + ++G ++T +++AG   +AI A++G+  I EEIDA+  +G+D 
Sbjct: 72  EIGAADLSGAGAALGAVTQVGPMVTVLIVAGAGATAICADLGARTIREEIDAMEVLGIDP 131

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L+ PR+ A      LL  L     I+G  +       +    F +       L  + 
Sbjct: 132 VKRLVVPRVAASTFVALLLNGLVCTIGILGGFLFSVLLQGVNPGAFVNGITLLTGLGELI 191

Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              IKA       G+VA  +G  V      +G  V   VV +   + +++++    
Sbjct: 192 LAQIKAGVFGMLAGLVACYKGLYVRGGPKEVGSAVNETVVFAFMCLFVVNTVITAV 247


>gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1]
 gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 9/259 (3%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YY 162
            +      Y    ++    N+   QA      +    +      ++ G LL LI QM   
Sbjct: 6   PSRPHPRWYRAAHEVAAGWNELGDQARFYAGTLRAVPDAVR---RYPGELLRLIAQMGLG 62

Query: 163 VGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            G   V      +V  ++  TGA++A QG  Q +  G E  +    +   +R I    TA
Sbjct: 63  TGALAVVGGTVAIVGFLTITTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIVPGTTA 122

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V ++   G+   A++G+M+INEEIDA+  +G+  V  L + R+ A ++ +  L  +A   
Sbjct: 123 VALSATIGAGATAQLGAMRINEEIDALEVIGIRSVTYLAATRVLAGVVVVIPLYCIAVMM 182

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A + A       Y     V+   F++     ++    +++  +   + +V    G+    
Sbjct: 183 AFLAARTGTTVIYGQGSGVYDHYFNTFLNPTDLVWSFLQSVAITVVVMLVHTYYGYTARG 242

Query: 338 HSNSLGKKVTTCVVQSISI 356
               +G+ V   V  S+ +
Sbjct: 243 GPAGVGEAVGRAVRTSMVV 261


>gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898146|gb|EFG77721.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 280

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 7/250 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176
           ++D   QA   G  + +           K  +  +       G        V V   ++ 
Sbjct: 20  VDDFGEQALFYGQTVRHVPHAITKYR--KETIRLIAEMTMGAGALVMIGGTVGVAAFLTL 77

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G+M+
Sbjct: 78  ASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           ++EEIDA+  M ++ V  L+S R+ A +I++  L  L+  +A   A             +
Sbjct: 138 VSEEIDAVECMAVESVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTVYINGQSKGL 197

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +   F++    +++    ++A  M+ A+ +V    G+        +G  V   V  S+ +
Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSLIV 257

Query: 357 VIIIDSLFAI 366
           V++I    ++
Sbjct: 258 VVVITLFISL 267


>gi|206602875|gb|EDZ39356.1| Probable ABC transporter, permease protein [Leptospirillum sp.
           Group II '5-way CG']
          Length = 261

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 116/255 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             V F         +  ++++   +F       +  L   + Q+ + G+  +P++ ++SF
Sbjct: 6   SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G     +   +L + G +     ++  + LR +G   TA+++  R+ S++  EIG+M+
Sbjct: 66  LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+ E+D I  MG +    L++PR++  I+S   L++     A +G  ++ +    +P   
Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFLGGLLIAFFGLSMPIVS 185

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
                 ++  L+++   L+++      I  V    G  VG     + ++ T  +V SI +
Sbjct: 186 LIRALETSINLSDLLIPLVESITYGSIIAAVGSYHGLKVGDSPADVPQQTTRALVSSIVL 245

Query: 357 VIIIDSLFAIFYFAI 371
             +  + F +F   +
Sbjct: 246 CTLFSTFFLVFSSVL 260


>gi|120405106|ref|YP_954935.1| hypothetical protein Mvan_4152 [Mycobacterium vanbaalenii PYR-1]
 gi|119957924|gb|ABM14929.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 269

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 1/250 (0%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178
           +   N        +G   S   +     +         + Q ++V    +   +L++   
Sbjct: 13  IALPNGLSGAMAAVGGFFSMALDAVRFVFVRPFQWREFLEQCWFVARVSMAPTLLVAIPF 72

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
             +++      L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I 
Sbjct: 73  TVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIR 132

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G         D+    F 
Sbjct: 133 EEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGILGGYFFSVFVQDVNPGAFA 192

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357
           +       +  +    +KA       G+VA   G    G  + ++G  V   VV +   +
Sbjct: 193 AGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMAL 252

Query: 358 IIIDSLFAIF 367
            +I+ +    
Sbjct: 253 FVINVVVTAI 262


>gi|312137896|ref|YP_004005232.1| integral membrane protein yrbe1b [Rhodococcus equi 103S]
 gi|325673337|ref|ZP_08153029.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Rhodococcus equi ATCC 33707]
 gi|311887235|emb|CBH46544.1| putative integral membrane protein YrbE1B [Rhodococcus equi 103S]
 gi|325555927|gb|EGD25597.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Rhodococcus equi ATCC 33707]
          Length = 285

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 102/258 (39%), Gaps = 3/258 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKF---KGFLLSLIRQMYYVGVSGVPVVIL 173
            +V  + D           + +         K    +   +S        G   + +V  
Sbjct: 19  AVVDGLADVGRHVTFFFRTLVSLPYAATRYRKHVLAQISEVSFGTNSVLSGGGTIGIVFA 78

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S     ++  +    L   G    S  L +I   RE+  ++ A+ +A + G+   A++G
Sbjct: 79  MSLAAAMMLGVETQRGLELVGMTTLSGMLSAIANTRELAPVVVAIALAAKVGTGFTAQLG 138

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+I++EIDA+ +MG+  +  L   R+ A ++ +  + ++   ++ +   +VI  +    
Sbjct: 139 AMRISDEIDALDSMGVRSIPFLAGTRVLAAMVCVLPIFMIGLLASYLSTRLVIVVWGGAS 198

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              +   FH   +  ++    IKA   A  + +V    G+        +G+     +  +
Sbjct: 199 AGTYDYFFHLALSPVDLVYAAIKAIVFAGVVALVHCSYGYFASGGPAGVGQAAGRALRTA 258

Query: 354 ISIVIIIDSLFAIFYFAI 371
           I  + ++D L     + +
Sbjct: 259 ILAIGVLDVLMTFALWGL 276


>gi|124514232|gb|EAY55746.1| probable ABC transporter, permease protein [Leptospirillum rubarum]
          Length = 261

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 115/255 (45%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
             V F         +  ++++   +F       +  L   + Q+ + G+  +P++ ++SF
Sbjct: 6   SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
           + G     +   +L + G +     ++  + LR +G   TA+++  R+ S++  EIG+M+
Sbjct: 66  LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+ E+D I  MG +    L++PR++  I+S   L++     A IG  ++ +    +P   
Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFIGGLLIAFFGLSMPIVS 185

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
                 ++  L ++   L+++      I  V    G  VG     + ++ T  +V SI +
Sbjct: 186 LIRALETSINLPDLLIPLVESITYGSIIAAVGSYHGLKVGDSPTDVPQQTTRALVSSIVL 245

Query: 357 VIIIDSLFAIFYFAI 371
             +  + F +F   +
Sbjct: 246 CTLFSTFFLVFSSVL 260


>gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99]
 gi|118570404|gb|ABL05155.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium ulcerans Agy99]
          Length = 277

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 96/221 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   + T +   S ++        + Q ++V        +L++     +       
Sbjct: 32  VRALGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNV 91

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 92  LLTDIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 151

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ ++ L+ PR+       P L+ L   + +IGA +       +    + +   +     
Sbjct: 152 INPIQALVVPRVLGATTVSPALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTV 211

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           ++   +IKA       G++A  +G +VG     +G+ V   
Sbjct: 212 DVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNET 252


>gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 282

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 96/234 (41%), Gaps = 1/234 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +  + +      +         +     +    +      +  +G   V +V  ++  TG
Sbjct: 24  RVGDHTLFYLRAIAGTPHAALHYRKELVRLIAEISMGAGTLAMIG-GTVVIVGFLTLATG 82

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G+M+INE
Sbjct: 83  GVLAIQGYSSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMRINE 142

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+ +M +  V  L+S RI A +I++  L  +A   + + +             ++  
Sbjct: 143 EIDALESMAIRPVEYLVSTRIVAGMIAITPLYAIAVILSFLASQFTTVVLLGQSGGLYNH 202

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
            F +     ++    ++A  MA  I ++    G+      + +G  V   V  S
Sbjct: 203 YFDTFLNPIDLLWSFLQAILMAITILLIHTYFGYFASGGPSGVGVAVGNAVRTS 256


>gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99]
 gi|183984021|ref|YP_001852312.1| integral membrane protein YrbE3B_1 [Mycobacterium marinum M]
 gi|118571236|gb|ABL05987.1| conserved hypothetical integral membrane protein YrbE3B_1
           [Mycobacterium ulcerans Agy99]
 gi|183177347|gb|ACC42457.1| conserved hypothetical integral membrane protein YrbE3B_1
           [Mycobacterium marinum M]
          Length = 284

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 9/244 (3%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVI 172
           V   N   +Q    G  + +           +  L+ LI QM        V    V +V 
Sbjct: 21  VAGWNQIGTQTKFFGRTLRSIHYMLIHY---RVELIRLIAQMGLGAGALMVIGGTVAIVG 77

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++  TGA++A QG    S+ G E  +    +   +R I    TA+ ++   G+   A++
Sbjct: 78  FLTVTTGALVAVQGYSDFSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQL 137

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+M+IN+EIDA+  MG+  +  L + R+ A ++ +  L  +   ++   A       Y  
Sbjct: 138 GAMRINDEIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLYSQ 197

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              V+   F +     ++    ++   ++  I +V    G+        +G+ V   V  
Sbjct: 198 ATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPAGVGEAVGRAVRT 257

Query: 353 SISI 356
           S+  
Sbjct: 258 SLIF 261


>gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1]
 gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 280

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 107/260 (41%), Gaps = 10/260 (3%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167
           ++ +    +     I G      G+  AS     + +     R +  +            
Sbjct: 8   RLRRAFRHTPRLVDIFGEQALFYGQSLASLPLAVRLYRRETARLIAEMAFGAGGLLVIGG 67

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + V + ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+
Sbjct: 68  TLGVTVFLTLASGGVIAVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGA 127

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
              A++G+M+I EEIDA+  M +  +  L++ R+ A +I +  L  LA  ++   A    
Sbjct: 128 GSTAQLGAMRIAEEIDALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSFFSARFTT 187

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
                    ++   F++     ++    ++A  M+ A+ +V    G+        +G   
Sbjct: 188 VYLSGQSRGLYDHYFNTFLIPTDLLWSFLQAIAMSIAVMLVHTYYGYNAKGGPVGVGVAT 247

Query: 347 TTCVVQSISIVIIIDSLFAI 366
              V  S+ +V++I  L ++
Sbjct: 248 GDAVRTSLIVVVVITLLISL 267


>gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium 104]
          Length = 280

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 7/250 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176
           ++D   QA   G  +             K  +  +       G        V V   ++ 
Sbjct: 20  VDDFGEQALFYGQTMRYVPNALTRYR--KETIRLIAEMTMGAGALVMIGGTVGVAAFLTL 77

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G+M+
Sbjct: 78  ASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           ++EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A             +
Sbjct: 138 VSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYINGQSKGL 197

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +   F++    +++    ++A  M+ A+ +V    G+        +G  V   V  S+ +
Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQAVRTSLIV 257

Query: 357 VIIIDSLFAI 366
           V++I    ++
Sbjct: 258 VVVITLFISL 267


>gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 280

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 7/250 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176
           ++D   QA   G  +             K  +  +       G        V V   ++ 
Sbjct: 20  VDDFGEQALFYGQTMRYVPNALTRYR--KETIRLIAEMTMGAGALVMIGGTVGVAAFLTL 77

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G+M+
Sbjct: 78  ASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           ++EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A             +
Sbjct: 138 VSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYINGQSKGL 197

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +   F++    +++    ++A  M+ A+ +V    G+        +G  V   V  S+ +
Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQAVRTSLIV 257

Query: 357 VIIIDSLFAI 366
           V++I    ++
Sbjct: 258 VVVITLFISL 267


>gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [Mycobacterium sp. KMS]
 gi|119693683|gb|ABL90756.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 284

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV------- 168
           +++  +++                G        +K  L  L+ QM  +GV  +       
Sbjct: 15  RRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLGVGALAVVGGTV 73

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V  ++  TGA++A QG  Q +  G E  +    +   +R IG ++  + +A   G+  
Sbjct: 74  VIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGA 133

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G+M+INEEIDA+  MG+  V  L S R+ A +I +  L  +A  SA   A      
Sbjct: 134 TAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIA 193

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            Y     V+   F +     +I     +A  MA  I +V    GF        +G+ V  
Sbjct: 194 IYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGR 253

Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373
            V  S+       ++  + + ++ I
Sbjct: 254 AVRTSLIA-----AVLVVLFLSLAI 273


>gi|226304447|ref|YP_002764405.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494370|ref|ZP_04388133.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|226183562|dbj|BAH31666.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318732|gb|EEN84590.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 254

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 99/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G     + +   + +         I Q ++V    +   +L++     +++     
Sbjct: 9   LRAVGGFFQMSAQTLRAVFSRPFQRQEFIDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++ +  I EEIDA++ +G
Sbjct: 69  LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMKVLG 128

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A      LL  L     I+G  +      D+    F +         
Sbjct: 129 INPIHRLVVPRVLASTGVALLLNGLVCTIGILGGFVFSVFIQDVNPGAFVNGITLLTGFG 188

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G+VA   G  V   + S+G  V   VV +   + +++ L    
Sbjct: 189 ELMLSMVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFAFMALFVVNVLITTI 247


>gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118166635|gb|ABK67532.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 282

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV- 168
              +G ++V+       Q    G  ++   +      ++ G LL LI +M    G   V 
Sbjct: 11  FAALGPRLVESTRKLGEQTVFYGQSLTAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67

Query: 169 ----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
                ++  ++  TGA++A QG   LS  G E  +  L + L +R I      + +A   
Sbjct: 68  GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+INEEIDA+  MG+  V  L S RI A I+ +  L  +A   + I A +
Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           +    Y     V+   F +     ++      A  MA  + +V    GF        +G+
Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  S+ +   +  + ++
Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269


>gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 282

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV- 168
              +G ++V+       Q    G  ++   +      ++ G LL LI +M    G   V 
Sbjct: 11  FAALGPRLVESTRKLGEQTVFYGQSLAAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67

Query: 169 ----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
                ++  ++  TGA++A QG   LS  G E  +  L + L +R I      + +A   
Sbjct: 68  GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           G+   A++G+M+INEEIDA+  MG+  V  L S RI A I+ +  L  +A   + I A +
Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187

Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
           +    Y     V+   F +     ++      A  MA  + +V    GF        +G+
Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247

Query: 345 KVTTCVVQSISIVIIIDSLFAI 366
            V   V  S+ +   +  + ++
Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269


>gi|311741975|ref|ZP_07715785.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311314468|gb|EFQ84375.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 283

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 96/256 (37%), Gaps = 1/256 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +          A  +  +     ++     +    +      M  +G   V VV  +S
Sbjct: 22  RSVGDLGTQLMFYARAIAWIPLTIRKYPKEIRRLIAEVSMGSGAMAAIG-GTVFVVFFLS 80

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G  +  +        G    S    +    RE   ++  + +    G+   A++G+M
Sbjct: 81  LAIGIQVGLEAFTTFGNIGVGALSGFFSAYFNTREAAPIMACIALTATVGAGFTAQLGAM 140

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +++EEIDA+  M +  +  L++ RI A ++++  L  +   +  +   +++   +     
Sbjct: 141 RVSEEIDALDVMAVPSIPYLVTTRIVAGMVAVVPLFAIGLITMFLATQVMVTVAFGQATG 200

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +   F +     ++    +K    A  I  V    G+        +G+ V   V  S+ 
Sbjct: 201 TYQHYFDTFLVPGDVALAGVKVLLTAVVIMCVCCYYGYTASGGPAGVGRSVGRAVRTSLI 260

Query: 356 IVIIIDSLFAIFYFAI 371
            V+ ID +F I ++ +
Sbjct: 261 TVMSIDLVFGIAFWGV 276


>gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS]
 gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS]
 gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 280

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 7/255 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVV 171
            +   ++    QA   G  I             K  +  +       G        V V 
Sbjct: 15  WVPGAVDTMGEQALFYGETIRYIPNAVTRYR--KETIRLIAEMTMGAGALVMIGGTVGVA 72

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A+
Sbjct: 73  AFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGTTAQ 132

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M++ EEIDA+ TM +  V  L+S R+ A +I++  L  L+  +A   A         
Sbjct: 133 LGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARFTTVYING 192

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               ++   F++    +++    ++A  M+ A+ +V    G+        +G  V   V 
Sbjct: 193 QSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVR 252

Query: 352 QSISIVIIIDSLFAI 366
            S+ +V+ I    ++
Sbjct: 253 TSLIVVVTITLFISL 267


>gi|169628784|ref|YP_001702433.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169240751|emb|CAM61779.1| Putative YrbE family protein [Mycobacterium abscessus]
          Length = 272

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 107/261 (40%), Gaps = 6/261 (2%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVV 171
           +           H++   +        +  +++   L L+  +        VG     VV
Sbjct: 5   VDTAARPLARFGHMVTFFVHAFLAIPIALRRYRREFLRLLSDITWGNGSIVVGGGTAGVV 64

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           +++    GA++A +G   L   G    +  + S++  RE+  ++ A+  A ++G     +
Sbjct: 65  LVLGVTAGALVAIEGYNFLELMGLGPATGVISSLVTTRELAPIMAALAFAVQAGCRFTTQ 124

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +GSM+I EE+DA+ ++ +  +  L++ R+ A ++++  L +     + +   I++     
Sbjct: 125 LGSMRIAEEVDAMDSLAIRPIPYLVTTRLLASVVAIIPLYVACLTISYLSCQIMVGIVSG 184

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
                +   F   A+  +I   + KA         V    GF        +G      + 
Sbjct: 185 GSMGPYLHYFTLLASGTDIAYSVGKAIIFVWIASAVQCYYGFCADGGPEGVGIAAGHAMR 244

Query: 352 QSISIVIIIDSLFAIFYFAIG 372
            SI+ VII++ L  +  +++ 
Sbjct: 245 ASITAVIIVNMLLTMALWSVD 265


>gi|254819936|ref|ZP_05224937.1| TrnB1 protein [Mycobacterium intracellulare ATCC 13950]
          Length = 262

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 101/236 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + T +      +        I Q ++V    +   IL+S    A+       
Sbjct: 18  LREVGSYFALTLDIFTQLVRPPFAWREFIHQAWFVARVSIAPTILLSIPFNALSVFIINV 77

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  +  IG + T +++AG   +AI A++G+  I EE+DA+R MG
Sbjct: 78  LLVEIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMG 137

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PR+ AL ++  LL  +     ++G+      +  +    + +       +A
Sbjct: 138 INPVQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIA 197

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           ++     KA       G +A  +G  VG     +G  V   VV +   + +I+ + 
Sbjct: 198 DVAIAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 253


>gi|120403833|ref|YP_953662.1| hypothetical protein Mvan_2849 [Mycobacterium vanbaalenii PYR-1]
 gi|119956651|gb|ABM13656.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 270

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 104/249 (41%), Gaps = 1/249 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
                  +    +G ++S + +     ++        + Q ++V    +   +L++    
Sbjct: 15  ALGAGMAAPMQGVGGLLSMSADAVKFLFRRPFQGREFLEQSWFVARVSLMPTLLVAIPFT 74

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +++      L + GA   S    +   + ++G ++T +++AG   +A+ A++GS  I E
Sbjct: 75  VLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRE 134

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G          +    F +
Sbjct: 135 EIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFIQGVNPGAFAA 194

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVI 358
                  +  +    +KA       G+VA   G +  G  + ++G  V   VV +   + 
Sbjct: 195 GITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISGGGAKAVGNAVNETVVYAFMALF 254

Query: 359 IIDSLFAIF 367
           +++ +    
Sbjct: 255 VVNVVVTAI 263


>gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1]
 gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 285

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 4/252 (1%)

Query: 103 FYNSFKNLHYHIGKKIV---KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
               F  L  H+G+ +    +  +        +G V      F     +    +      
Sbjct: 7   LRQRFPRLVDHLGRPVALLSRLGDHVLFYGRAIGGVPHAAVHFRKEIVRLIAEISMGAGT 66

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
           +  +G   V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + 
Sbjct: 67  LAMIG-GTVVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRIAAPVVAGIG 125

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           +A   G+ + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A   + 
Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSIAVILSF 185

Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339
           + +       +     ++   F +     ++    ++A  MA AI +V    G+      
Sbjct: 186 VASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGP 245

Query: 340 NSLGKKVTTCVV 351
           + +G  V   V 
Sbjct: 246 SGVGAAVGNAVR 257


>gi|226306858|ref|YP_002766818.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|226185975|dbj|BAH34079.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
          Length = 257

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 98/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG       +     ++ +  +   + Q + +    +   +L++     +++     
Sbjct: 12  MRELGQFYRMGADVAVGLFRTRFQVQEFLEQSWMIARVSIVPTVLVAVPFTVLVSFTLNI 71

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++GS  I EEIDA+  +G
Sbjct: 72  LLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAMEVLG 131

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A  +   LL  L     I G          +    F         L 
Sbjct: 132 IDPINRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLLTGLP 191

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G+VA   G +V      +G+ V   VV +   + +++++    
Sbjct: 192 EVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIVTAV 250


>gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1]
 gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 265

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 95/239 (39%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  +        ++ +        I Q +++        + +S     ++      
Sbjct: 19  LEAVGGFVRMCVLVGKATLRPPFQWREFILQSWFLMRVAFLPTLAVSIPLTVLLIFTLNI 78

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FGA   S    +I  + ++G L+T +++AG   +AI A++G+  I EEIDA+  +G
Sbjct: 79  LLAEFGAADVSGAGAAIGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLG 138

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A      LL        ++G  I      ++    + S       L 
Sbjct: 139 IDPIHRLVVPRVVASTFVAILLNGAVITVGLVGGFIFGVYLQNVSAGAYVSTLTLITGLP 198

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G+V    G  V   +  +G  V   +V  +  +  ++ +    
Sbjct: 199 EVVISIVKAATFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257


>gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membrane protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 280

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 7/250 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176
           ++D   QA   G  +             K  +  +       G        V V   ++ 
Sbjct: 20  VDDFGEQALFYGQTVRYVPNALTRYR--KETVRLIAEMTMGAGALVMIGGTVGVAAFLTL 77

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G+M+
Sbjct: 78  ASGGVIAVQGYSSLGHIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           ++EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A             +
Sbjct: 138 VSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTVYINGQSKGL 197

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           +   F++    +++    ++A  M+ A+ +V    G+        +G  V   V  S+ +
Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSLIV 257

Query: 357 VIIIDSLFAI 366
           V++I    ++
Sbjct: 258 VVVITLFISL 267


>gi|108797253|ref|YP_637450.1| hypothetical protein Mmcs_0273 [Mycobacterium sp. MCS]
 gi|119866338|ref|YP_936290.1| hypothetical protein Mkms_0283 [Mycobacterium sp. KMS]
 gi|126432877|ref|YP_001068568.1| hypothetical protein Mjls_0264 [Mycobacterium sp. JLS]
 gi|108767672|gb|ABG06394.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692427|gb|ABL89500.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232677|gb|ABN96077.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 256

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 101/240 (42%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G +     +    +++        + Q ++V    +   +L++     +++     
Sbjct: 10  LGAVGGLFGMALDAVRFTFRRPFQAREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNI 69

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEI+A+  +G
Sbjct: 70  LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIEAMEVLG 129

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V  L++PR+ A  +   LL  L     I+G         D+    F +       + 
Sbjct: 130 INPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSVFVQDVNPGAFAAGITLLTGIG 189

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G ++    + ++G  V   VV +   + +I+ +    
Sbjct: 190 EVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALFVINVVVTAI 249


>gi|289642565|ref|ZP_06474708.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289507653|gb|EFD28609.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 6/279 (2%)

Query: 93  IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152
                  R     +  N+       + + I D      +L  ++S          + +G+
Sbjct: 6   AAGPSRHRPRSSPAVTNVMIKFPPSLQRVIVDVGQSGQLLAQLVSTAVR------QPRGY 59

Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212
                 +MY +         L       +I       L+  GA+     +      REI 
Sbjct: 60  WAETRDEMYAMLRFCWLSCTLAVGGFCFLIGNYAYNILTLLGAQNRLGTVFVFASAREIS 119

Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272
              T + +AG  G+A+ A++G+ +I EE+DA++ +GLD +R+L+ PR+ A+ +      I
Sbjct: 120 PFCTGMAVAGVMGTALTADLGARRIREELDAMKVLGLDAMRVLVLPRVIAITVMTAAFNI 179

Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332
           +     +  A I      D     FFS F S  T+ ++   ++K   +   IGIV  ++G
Sbjct: 180 VGVAVGVAMAMISGTVIGDTSAGSFFSVFLSNVTVPDLVGTVVKTVLIGFFIGIVCAQKG 239

Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
                    +G+ V   VV   + V +I+ +       +
Sbjct: 240 LNARGGPEGVGRAVNEAVVLCFAAVWVINFVANAVLLGL 278


>gi|50261859|gb|AAT72482.1| AT1G19800 [Arabidopsis lyrata subsp. lyrata]
          Length = 205

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 90/181 (49%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
            G+      K K    + ++Q+   G   + V +L S   G     Q   + ++ G    
Sbjct: 25  AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 84

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++++   RE+  ++T++++AGR GSA  AE+G+M+++E+ D +R +G D +  LI+P
Sbjct: 85  IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 144

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
           R+ A  ++LP LT++     +  ++++    Y I   +     H      +I + +IK+ 
Sbjct: 145 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 204

Query: 319 F 319
            
Sbjct: 205 V 205


>gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 290

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 104/268 (38%), Gaps = 1/268 (0%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
            +   +       + I      +   A  +  +     +      +    +      +  
Sbjct: 15  KFGRTRARVARTSRSIDDVGRQAVFFARAIAHIPWAIRKHPKEVLRLVAEISMGTGALAV 74

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G   V VV  ++  +G  IA QG   L   G E  +    + + +R    ++  + ++ 
Sbjct: 75  IG-GTVAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSA 133

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
             G+   A+IG+M+I+EEIDA+ +M +  V  ++S R+ A +I++  L  LA   + +  
Sbjct: 134 TIGAGSTAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSLALVGSFLAG 193

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                  +     ++   F +     ++    ++   MA  + ++    G+      + +
Sbjct: 194 RFTTVVLFGQSSGLYDHYFTTFLDPVDVAWSFVQVLVMALLVMLIHTYYGYNASGGPSGV 253

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           G  V   V  S+  V+ +  L ++  + 
Sbjct: 254 GTAVGRGVRLSLICVVAVTLLVSLALYG 281


>gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3A [Mycobacterium marinum M]
 gi|183176210|gb|ACC41320.1| conserved hypothetical integral membrane protein YrbE3A
           [Mycobacterium marinum M]
          Length = 282

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 96/221 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   + T +   S ++        + Q ++V        +L++     +       
Sbjct: 37  VRALGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNV 96

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 97  LLTDIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 156

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ ++ L+ PR+ A       L+ L   + +IGA +       +    + +   +     
Sbjct: 157 INPIQALVVPRVLAATTVSLALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTV 216

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           ++   +IKA       G++A  +G +VG     +G+ V   
Sbjct: 217 DVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNET 257


>gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis
           str. MC2 155]
          Length = 289

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 7/243 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVILI 174
           +F++     A  +   I +           +  L  +       G   V      ++  +
Sbjct: 27  RFLDSMGHVAWFVVQAIVHVPHAFRHYR--RESLRLVAEIGMGTGAMAVIGGTVAIIGFV 84

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +   G++IA QG   L   G E F+    ++  +R +  ++T   +A   G+   AE+G+
Sbjct: 85  TLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRVVAPVVTGQALAATVGAGATAELGA 144

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+I+EE+DA+  MG+  +  L+S RI A  I +  L  +A   + + A +V   +Y    
Sbjct: 145 MRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPLYAMAILLSFMSAQLVTTIFYSQSV 204

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             +   FH+   + ++    ++   M+  + +     G+     +  +G+ V   +  S+
Sbjct: 205 GTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCYFGYFASGGAVGVGEAVGRSMRTSL 264

Query: 355 SIV 357
             +
Sbjct: 265 IAI 267


>gi|118467231|ref|YP_881722.1| TrnB1 protein [Mycobacterium avium 104]
 gi|118168518|gb|ABK69415.1| TrnB1 protein [Mycobacterium avium 104]
          Length = 261

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 100/236 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   + T +               + Q ++V    +   IL+S    A+       
Sbjct: 17  LREVGSYFALTLDIFVQLVHPPFAWREFVHQAWFVARVSIAPTILLSIPFNALSVFIINV 76

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  +  IG + T +++AG   +AI A++G+  I EE+DA+R MG
Sbjct: 77  LLVEIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMG 136

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PR+ AL ++  LL  +     ++G+      +  +    + +       +A
Sbjct: 137 INPVQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIA 196

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           ++     KA       G +A  +G  VG     +G  V   VV +   + +I+ + 
Sbjct: 197 DVAIAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 252


>gi|300865114|ref|ZP_07109939.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336885|emb|CBN55089.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 290

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +   G+      K K     +I  +  VG+  +  V+LI+   G +   Q A +L +FG
Sbjct: 49  TLLLGGQVWLRLLKGKVCRKLVIEHLVTVGLGSLRAVLLIALFAGMIFTIQSARELIRFG 108

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           A        +I   RE+  +LTA ++AG+ GS   AEIG M++ E++DA+  +  + V  
Sbjct: 109 AVGAVGGAFAIAFCRELAPVLTAGVVAGQVGSGFAAEIGEMQVTEQVDALYMLKTNPVDY 168

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
           L+ PR+ A  I LP+LTI +    I G +     +Y +P  +F     +     ++ T +
Sbjct: 169 LVLPRVVACCIMLPILTIFSVVVGIGGGAFAAAIFYHLPPGMFLESVRTFLEPWDLVTVV 228

Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF-YFAIGI 373
           +K       IGI+    G         +G+  T  VV S   + + D   ++  +  + I
Sbjct: 229 VKGVIFGAIIGIIGCGWGLTTTGGGKGVGRSATAAVVTSWVSIFMADFFLSLLMFHELAI 288


>gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 [Mycobacterium marinum M]
 gi|183178005|gb|ACC43115.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 281

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 98/242 (40%), Gaps = 7/242 (2%)

Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173
           V  ++         G  I   G   A+++  +  +  +       G        + +V  
Sbjct: 18  VGTLSRIGDHTLFYGKAI--AGAPFAATHYRREIIRLVAEISMGAGTLAMIGGTLVIVGF 75

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G
Sbjct: 76  LTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLG 135

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
           +M+INEEIDA+ +M +  V  L+S RI A ++++  L  +A   + + +       +   
Sbjct: 136 AMRINEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQFTTVILFGQS 195

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
             ++   F +     ++    ++A  MA  I ++    G+        +G      V  S
Sbjct: 196 GGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTS 255

Query: 354 IS 355
           + 
Sbjct: 256 LI 257


>gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [Mycobacterium vanbaalenii PYR-1]
 gi|119958171|gb|ABM15176.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 10/259 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVS---------GVPVV 171
           ++   +    LGL     G    S+          ++RQ+  +G            V +V
Sbjct: 14  LSQWAAGLDRLGLQTLFYGHTLRSTGDAAIHYRAEILRQIAQMGFGVGALAAIGGTVVIV 73

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++   GA++A  G  QLSQ G E  +  + +   +R IG L+  + +A   G+   A+
Sbjct: 74  SFLTVSVGALVAVIGFNQLSQVGVEALTGFISAFFNVRLIGPLIAGIALAATIGAGTTAQ 133

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+INEEIDA+  MG+  V  L S R+ A  + +  L  +A  SA + A +    +Y 
Sbjct: 134 LGAMRINEEIDALEVMGVRSVSYLASTRLIAGTLVVVPLYCVALISAFVAAKVGTTVFYG 193

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               V+   F++     ++    + A  MA  I +V    GF        +G+ V   V 
Sbjct: 194 QSVGVYEHYFYTFLNPDSVVWSFLLAVTMAVVIMLVHTYYGFNAAGGPAGVGQAVGQSVR 253

Query: 352 QSISIVIIIDSLFAIFYFA 370
            S+    ++    ++  + 
Sbjct: 254 ASLVAATVMTMFVSLALYG 272


>gi|296169577|ref|ZP_06851197.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895843|gb|EFG75538.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 249

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 103/240 (42%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G + + + +     ++        + Q ++V    +   +L++     +++     
Sbjct: 1   MEAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVAIAPTLLVAIPFTVLVSFTLNI 60

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    +   + ++G L+T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 61  LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLG 120

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G  +      D+    F +       + 
Sbjct: 121 INPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 180

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G    G  + ++G  V   VV +   + +++ +    
Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240


>gi|326331673|ref|ZP_08197961.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950472|gb|EGD42524.1| ABC-transporter integral membrane protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 273

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 109/261 (41%), Gaps = 4/261 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK----FKGFLLSLIRQMYYVGVSGVPVV 171
           +               +G  I+   E CA + +     +        Q +++    +   
Sbjct: 8   RLATGLWRRFAEGLRTVGETIALGAEACAYAARDIVTGRFDWAQAADQAWFMARVSLLPT 67

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           IL++   G V + Q     +  GA  FS  +  +  LR+   L+T+++IA   GSAI ++
Sbjct: 68  ILVAIPFGVVTSIQVGAVANSIGASSFSGAVNGVGVLRQAAPLVTSLIIACVVGSAICSD 127

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G   I +EI A+  MG + V+ +++PRI A +    +LT +   +AI    ++      
Sbjct: 128 LGMRAIRDEIAALEVMGTNPVQRMVAPRIVAAVFLSVMLTAIVAVAAIATGYVMNVGRGV 187

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    +   F + +  A+++    KA         VA  +G         +   V   VV
Sbjct: 188 VGAGTYLDAFTNFSQSADLWLAEGKAVLFGLIGTTVAAHKGLGATGGPQGVADAVNQTVV 247

Query: 352 QSISIVIIIDSLFAIFYFAIG 372
            ++ ++ +++++    Y A+ 
Sbjct: 248 LNVIVLAVVNAVVTQGYLALA 268


>gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK]
 gi|315441804|ref|YP_004074683.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 265

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 96/239 (40%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G  +        ++++        I Q +++        + +S     ++      
Sbjct: 19  LLAVGGFVRMCVLVGKATFRTPFQWREFILQSWFLLRVAFLPTVAVSIPLTVLLIFTLNI 78

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FGA   S    ++  + ++G L+T +++AG   +AI A++G+  I EEIDA+  +G
Sbjct: 79  LLTEFGAADISGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLG 138

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A      LL        ++G  I      ++    + S       L 
Sbjct: 139 IDPIHRLVVPRVIASTFVAMLLNGAVITIGLVGGFIFGVYLQNVSAGAYVSTLTLVTGLP 198

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   L+KA       G+V    G  V   +  +G  V   +V  +  +  ++ +    
Sbjct: 199 EVLISLVKALTFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257


>gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [Mycobacterium sp. MCS]
 gi|108768912|gb|ABG07634.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
          Length = 272

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV------- 168
           +++  +++                G        +K  L  L+ QM  +GV  +       
Sbjct: 3   RRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLGVGALAVVGGTV 61

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
            +V  ++  TGA++A QG  Q +  G E  +    +   +R IG ++  + +A   G+  
Sbjct: 62  VIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGA 121

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G+M+INEEIDA+  MG+  V  L S R+ A +I +  L  +A  SA   A      
Sbjct: 122 TAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIA 181

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            Y     V+   F +     +I     +A  MA  I +V    GF        +G+ V  
Sbjct: 182 IYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGR 241

Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373
            V  S+       ++  + + ++ I
Sbjct: 242 AVRTSLIA-----AVLVVLFLSLAI 261


>gi|229492731|ref|ZP_04386532.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229320390|gb|EEN86210.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 257

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 98/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG       +     ++ +  +   + Q + +    +   +L++     +++     
Sbjct: 12  MRELGQFYRMGADVAVGLFRTRFQMQEFLEQSWMIARVSIVPTVLVAVPFTVLVSFTLNI 71

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L + GA   S    ++  + ++G ++T +++AG   +AI A++GS  I EEIDA+  +G
Sbjct: 72  LLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAMEVLG 131

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A  +   LL  L     I G          +    F         L 
Sbjct: 132 IDPITRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLLTGLP 191

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G+VA   G +V      +G+ V   VV +   + +++++    
Sbjct: 192 EVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIVTAV 250


>gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS]
 gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 297

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 105/261 (40%), Gaps = 1/261 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +    Y   + L     + +    + +      +G +      +     +    +   
Sbjct: 16  RQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMG 75

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  +G   V +V  ++   G++IA QG   L   G E F+    +++ +R    +++
Sbjct: 76  TGAMAVIG-GTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVS 134

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
              +A   G+   AE+G+M+I+EEIDA+  MG+  +  L+S RI A  I +  L  +A  
Sbjct: 135 GQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAII 194

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + + A +    +Y      +   F +     ++    ++A  ++  + +     G+   
Sbjct: 195 MSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMLNHCYYGYYAS 254

Query: 337 VHSNSLGKKVTTCVVQSISIV 357
                +G+ V   +  S+  +
Sbjct: 255 GGPVGVGEAVGRSMRASLIAI 275


>gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 [Mycobacterium gilvum PYR-GCK]
 gi|315443152|ref|YP_004076031.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145215174|gb|ABP44578.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315261455|gb|ADT98196.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 284

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 103/263 (39%), Gaps = 15/263 (5%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
             +S         + I    N    Q    G  + +               + L+RQ+  
Sbjct: 5   RPHSQFPWLKARFRSIADPWNQVGVQTKFYGRTLRSIVIAVTRYR------IELVRQIAQ 58

Query: 163 VGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           +G+           V +V  ++  TGA++A QG    S+ G E  +    +   +R I  
Sbjct: 59  MGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYTDFSEIGVEALTGFASAFFNVRLIAP 118

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
             TAV +A   G+   A++G+M+INEEIDA+  MG+  V  L S R+ A ++ +  L  +
Sbjct: 119 ATTAVALAATIGAGATAQLGAMRINEEIDALEVMGIRSVAYLASTRVLAGLLVVIPLYCV 178

Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
              ++   A       Y     V+   F +     ++     +   +A  I +V    GF
Sbjct: 179 GVLASFWAARFGTTVIYGQSTGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGF 238

Query: 334 AVGVHSNSLGKKVTTCVVQSISI 356
           +       +G+ V   V  S+ +
Sbjct: 239 SARGGPAGVGEAVGRAVRTSLIL 261


>gi|218658451|ref|ZP_03514381.1| probable ABC transporter, permease protein [Rhizobium etli IE4771]
          Length = 184

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 89/155 (57%), Positives = 117/155 (75%)

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           ++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF
Sbjct: 28  SIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANF 87

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +++ GA+ V W Y  I FA F +R H   TL+ + +G+IKAPFMA  IGIVA  EG  VG
Sbjct: 88  ASLAGAAAVAWGYSGITFANFLARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVG 147

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
             + SLG+ VT  VV++I +VI++D LFA+FY AI
Sbjct: 148 GSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 182


>gi|311743965|ref|ZP_07717771.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
 gi|311313095|gb|EFQ83006.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Aeromicrobium marinum DSM 15272]
          Length = 275

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 2/225 (0%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           D+     ILG  I             K        Q +++        +L++   G +IA
Sbjct: 24  DTFGAMVILG--IGALRYIATDIVTRKFSWKEFYDQAWFMTRVAFLPTVLVAIPFGIIIA 81

Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243
            Q      Q GA  F+  +  I  LR+   L+T++++AG  GSAI A++G+  + EE+DA
Sbjct: 82  IQVGAVAQQIGAVSFTGAVNGIGILRQAAPLVTSLLMAGAVGSAICAQLGAQTVREEVDA 141

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           ++ MGL+ V+ +++PR+ A ++   LL +    +A++   ++      +    +   F +
Sbjct: 142 MKVMGLNPVQRIVAPRVAAAMVVGALLNVFVAATAMVTGYLINVGGGAVSSGAYLGSFIA 201

Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
            A   ++     KA        I+A  +G         +   V  
Sbjct: 202 FAQPTDLLLAEGKAVIFGFLATIIAAHKGLNASGGPKGVADAVNQ 246


>gi|213584877|ref|ZP_03366703.1| hypothetical protein SentesTyph_28030 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 179

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
           AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R 
Sbjct: 2   AETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRR 61

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTG 313
           +ISPR WA +ISLPLLTI+     I G S+V   +  I    F+S   +      ++   
Sbjct: 62  VISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNC 121

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           LIK+   A  +  +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 122 LIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 178


>gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Rv]
 gi|15841440|ref|NP_336477.1| hypothetical protein MT2017 [Mycobacterium tuberculosis CDC1551]
 gi|148661774|ref|YP_001283297.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra]
 gi|148823179|ref|YP_001287933.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis F11]
 gi|253798987|ref|YP_003031988.1| hypothetical protein TBMG_02025 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232135|ref|ZP_04925462.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis C]
 gi|254364784|ref|ZP_04980830.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260201058|ref|ZP_05768549.1| hypothetical protein MtubT4_13284 [Mycobacterium tuberculosis T46]
 gi|289443449|ref|ZP_06433193.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T46]
 gi|289570055|ref|ZP_06450282.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T17]
 gi|289746096|ref|ZP_06505474.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|289750549|ref|ZP_06509927.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T92]
 gi|289754062|ref|ZP_06513440.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|289758075|ref|ZP_06517453.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289762120|ref|ZP_06521498.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis GM 1503]
 gi|294996887|ref|ZP_06802578.1| hypothetical protein Mtub2_20873 [Mycobacterium tuberculosis 210]
 gi|297634534|ref|ZP_06952314.1| hypothetical protein MtubK4_10446 [Mycobacterium tuberculosis KZN
           4207]
 gi|297731522|ref|ZP_06960640.1| hypothetical protein MtubKR_10551 [Mycobacterium tuberculosis KZN
           R506]
 gi|306776197|ref|ZP_07414534.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu001]
 gi|306779978|ref|ZP_07418315.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu002]
 gi|306784728|ref|ZP_07423050.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu003]
 gi|306789085|ref|ZP_07427407.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu004]
 gi|306793420|ref|ZP_07431722.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu005]
 gi|306797803|ref|ZP_07436105.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu006]
 gi|306803684|ref|ZP_07440352.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu008]
 gi|306808258|ref|ZP_07444926.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu007]
 gi|306968081|ref|ZP_07480742.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu009]
 gi|306972306|ref|ZP_07484967.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu010]
 gi|307080017|ref|ZP_07489187.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu011]
 gi|307084591|ref|ZP_07493704.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu012]
 gi|313658855|ref|ZP_07815735.1| hypothetical protein MtubKV_10561 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2950435|emb|CAA17838.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3B
           [Mycobacterium tuberculosis H37Rv]
 gi|13881679|gb|AAK46291.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124601194|gb|EAY60204.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis C]
 gi|134150298|gb|EBA42343.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148505926|gb|ABQ73735.1| conserved hypothetical integral membrane protein YrbE3b
           [Mycobacterium tuberculosis H37Ra]
 gi|148721706|gb|ABR06331.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis F11]
 gi|253320490|gb|ACT25093.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289416368|gb|EFD13608.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T46]
 gi|289543809|gb|EFD47457.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T17]
 gi|289686624|gb|EFD54112.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|289691136|gb|EFD58565.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           T92]
 gi|289694649|gb|EFD62078.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|289709626|gb|EFD73642.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis GM 1503]
 gi|289713639|gb|EFD77651.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|308215377|gb|EFO74776.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu001]
 gi|308327132|gb|EFP15983.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu002]
 gi|308330568|gb|EFP19419.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu003]
 gi|308334402|gb|EFP23253.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu004]
 gi|308338198|gb|EFP27049.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu005]
 gi|308341893|gb|EFP30744.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu006]
 gi|308345382|gb|EFP34233.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu007]
 gi|308349685|gb|EFP38536.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu008]
 gi|308354315|gb|EFP43166.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu009]
 gi|308358257|gb|EFP47108.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu010]
 gi|308362185|gb|EFP51036.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu011]
 gi|308365842|gb|EFP54693.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           SUMu012]
 gi|323719530|gb|EGB28656.1| hypothetical protein TMMG_01226 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903572|gb|EGE50505.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           W-148]
 gi|328458742|gb|AEB04165.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 4207]
          Length = 271

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 9/257 (3%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV-----P 169
           K +V   N   SQ       ++   +        +G LL +I QM    GV  V      
Sbjct: 5   KALVSEWNRMGSQMRFFVGTLAGIPDALMHY---RGELLRVIAQMGLGTGVLAVIGGTVA 61

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++  TGA++A QG  Q +  G E  +    +    REI      V +A   G+   
Sbjct: 62  IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTT 121

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A +G+M+INEEIDA+  +G+  +  L S R+ A ++    L  +   +A + A +     
Sbjct: 122 AALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAI 181

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y     V+   F++     ++    ++   +A  I +V    G+A       +G+ V   
Sbjct: 182 YGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRA 241

Query: 350 VVQSISIVIIIDSLFAI 366
           V  S+ +  I   +  +
Sbjct: 242 VRASMVVASIAILVMTL 258


>gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacterium ulcerans Agy99]
 gi|118571363|gb|ABL06114.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
           ulcerans Agy99]
          Length = 280

 Score =  128 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 111/261 (42%), Gaps = 1/261 (0%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
            F      + + +      +      +  + + T  +   + +    +      +  +G 
Sbjct: 8   RFHRFMSRLARPVDNLGEQALFYGETVRYIPNATTRYRKETIRLVAEMTLGAGALVMIG- 66

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G
Sbjct: 67  GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  LA  +A   A   
Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFT 186

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     ++   F++    +++    ++A  MA A+ +V    G+     S  +G  
Sbjct: 187 TVFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIA 246

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +V++I    ++
Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267


>gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane protein [Mycobacterium kansasii ATCC
           12478]
          Length = 280

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 5/249 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           ++    QA   G  +               +    +      +  +G   V V   ++  
Sbjct: 20  VDSFGEQALFYGETVRYIPNAITRYRKETIRLVAEMTLGAGALVMIG-GTVGVAAFLTLA 78

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G+M++
Sbjct: 79  SGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRV 138

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A             ++
Sbjct: 139 SEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFINGQSKGLY 198

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
              F++    +++    ++A  M+ A+ +V    G+     S  +G  V   V  S+ +V
Sbjct: 199 DHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGSVGVGIAVGQAVRTSLIVV 258

Query: 358 IIIDSLFAI 366
           ++I    ++
Sbjct: 259 VVITLFISL 267


>gi|315443551|ref|YP_004076430.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSG-------- 167
           ++V  +    +    LG  +   G   A            +IR +  + +          
Sbjct: 13  RLVDNLGRPVAVLGRLGDHVLFYGRAVAGVPHAAVHFRKEIIRLIAEISMGAGTLAMIGG 72

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+
Sbjct: 73  TVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGA 132

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A   + I +    
Sbjct: 133 GVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIASQFTT 192

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F +     ++    ++A  MA AI +V    G+      + +G  V
Sbjct: 193 VVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGVGAAV 252

Query: 347 TTCVV 351
              V 
Sbjct: 253 GNAVR 257


>gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycobacterium marinum M]
 gi|183178282|gb|ACC43392.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium
           marinum M]
          Length = 280

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 5/249 (2%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           +++   QA   G  +               +    +      +  +G   V V   ++  
Sbjct: 20  VDNFGEQALFYGETVRYIPNAITRYRKETIRLVAEMTLGAGALVMIG-GTVGVAAFLTLA 78

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G+M++
Sbjct: 79  SGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRV 138

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           +EEIDA+  M +  V  L+S R+ A ++++  L  LA  +A   A             ++
Sbjct: 139 SEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTVFINGQSAGLY 198

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
              F++    +++    ++A  MA A+ +V    G+     S  +G  V   V  S+ +V
Sbjct: 199 DHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIAVGQAVRTSLIVV 258

Query: 358 IIIDSLFAI 366
           ++I    ++
Sbjct: 259 VVITLFISL 267


>gi|145225118|ref|YP_001135796.1| hypothetical protein Mflv_4540 [Mycobacterium gilvum PYR-GCK]
 gi|145217604|gb|ABP47008.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 270

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 107/249 (42%), Gaps = 1/249 (0%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
              +   +    +G ++S + +     ++        + Q ++V    +   +L++    
Sbjct: 15  GLRSGMSTPMQGIGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFT 74

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            +++      LS+ GA   S    +   + ++G ++T +++AG   +A+ A++GS  I E
Sbjct: 75  VLVSFTLNILLSELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRE 134

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
           EIDA+  +G++ V+ L++PR+ A  +   LL  L     I+G  +       +    F +
Sbjct: 135 EIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAA 194

Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVI 358
                  +  +    +KA       G+VA   G ++    + ++G  V   VV +   + 
Sbjct: 195 GITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALF 254

Query: 359 IIDSLFAIF 367
           +++ +    
Sbjct: 255 VVNVVVTAI 263


>gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [Mycobacterium vanbaalenii PYR-1]
 gi|119957755|gb|ABM14760.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 284

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 15/246 (6%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPV 170
              N   +Q       ++   +              L+R +  +G+           V +
Sbjct: 22  AGWNRIGAQMRFYAETLAAVPDAVVHYR------TELLRLIAQMGLGSGALVVVGGTVAI 75

Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230
           V  ++  TGA++A QG  QL+  G E  +    +   +R I    T+V ++   G+A  A
Sbjct: 76  VGFLTMTTGALVAVQGYNQLASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATA 135

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           ++G+M+INEEIDA+  +G+  V  L + R+ A +I +  L  +A   A + A       Y
Sbjct: 136 QLGAMRINEEIDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVIY 195

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
                V+   F +  +  ++     +   M   I +V    GF        +G+ V   V
Sbjct: 196 GQGSGVYDHYFGTFLSPTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGPAGVGEAVGRAV 255

Query: 351 VQSISI 356
             S+ +
Sbjct: 256 RTSMVV 261


>gi|254818326|ref|ZP_05223327.1| hypothetical protein MintA_00280 [Mycobacterium intracellulare ATCC
           13950]
          Length = 255

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 103/237 (43%), Gaps = 1/237 (0%)

Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191
           +G + + + +     ++        + Q +++    +   +L++     +++      L 
Sbjct: 12  IGGLFAMSADAVKFLFQRPFQWREFLEQSWFIARVAIAPTLLVAIPFTVLVSFTLNILLR 71

Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251
           + GA   S    +   + +IG ++T +++AG   +A+ A++GS  I EEIDA+  +G++ 
Sbjct: 72  ELGAADLSGAGAAFGAVTQIGPMVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLGINP 131

Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311
           V+ L++PR+ A  +   LL  L     I+G         D+    F +       +  + 
Sbjct: 132 VQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYAFSVFIQDVNPGAFAAGITLLTGVPEVI 191

Query: 312 TGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              +KA       G+VA   G    G  + ++G  V   VV +   +++++ +    
Sbjct: 192 ISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLMVVNVVVTAI 248


>gi|315445485|ref|YP_004078364.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|315263788|gb|ADU00530.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 270

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 105/240 (43%), Gaps = 1/240 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G ++S + +     ++        + Q ++V    +   +L++     +++     
Sbjct: 24  MQGIGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFTVLVSFTLNI 83

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            LS+ GA   S    +   + ++G ++T +++AG   +A+ A++GS  I EEIDA+  +G
Sbjct: 84  LLSELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIREEIDALEVLG 143

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L++PR+ A  +   LL  L     I+G  +       +    F +       + 
Sbjct: 144 INPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAAGITLLTGVP 203

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +    +KA       G+VA   G ++    + ++G  V   VV +   + +++ +    
Sbjct: 204 EVIISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALFVVNVVVTAI 263


>gi|297518302|ref|ZP_06936688.1| toluene ABC transporter, permease protein [Escherichia coli OP50]
          Length = 174

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 1/173 (0%)

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+  E++ ++  M +D +R +ISP
Sbjct: 1   MGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISP 60

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKA 317
           R WA +ISLPLLT++     I G S+V   +  I    F+S   +      ++   LIK+
Sbjct: 61  RFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKS 120

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
              A  +  +++  G+     S  + +  T  VV S   V+ +D +     F 
Sbjct: 121 VVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 173


>gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 [Mycobacterium gilvum PYR-GCK]
 gi|145215580|gb|ABP44984.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
          Length = 285

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSG-------- 167
           ++V  +    +    LG  +   G   A            +IR +  + +          
Sbjct: 13  RLVGNLGRPVAVLGRLGDHVLFYGRAVAGVPHAAVHFRKEIIRLIAEISMGAGTLAMIGG 72

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            V +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+
Sbjct: 73  TVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGA 132

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEEIDA+ +MG+  V  L+S RI A ++++  L  +A   + I +    
Sbjct: 133 GVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIASQFTT 192

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F +     ++    ++A  MA AI +V    G+      + +G  V
Sbjct: 193 VVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGVGAAV 252

Query: 347 TTCVV 351
              V 
Sbjct: 253 GNAVR 257


>gi|239787370|emb|CAX83846.1| ABC transporter permease protein [uncultured bacterium]
          Length = 168

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/167 (36%), Positives = 101/167 (60%)

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           M++  +RE   L+T +++AGRSGSA+ A +G+M+IN+EIDA+  MG+D VR L++P + A
Sbjct: 1   MALSVVREFAPLITGIVVAGRSGSALAARLGTMRINQEIDALHVMGIDPVRFLVAPALLA 60

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322
           +++ LPLLT+LA+F A+ GA + I     + F  ++ R      + ++  GL K+   A 
Sbjct: 61  MLVVLPLLTLLADFVALTGAGMYICMDLGMDFPAYWERVIEALKVDDLGHGLGKSVIFAV 120

Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
            + +V +  G  V   +  +GK  T  VV +IS +++ D LFA    
Sbjct: 121 LVTLVGVVNGSLVQGGAEGVGKATTRSVVHAISAIVVTDMLFAFVLT 167


>gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341 [Mycobacterium intracellulare ATCC
           13950]
          Length = 256

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 100/239 (41%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   +   +      +        + Q ++V    +   +++S     +       
Sbjct: 12  VRSVGDFFALALDTLLQIPRRPFAGREFLLQSWFVARVSIAPTMMLSIPFTVLTVFTINI 71

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG L+T +++AG   +A+ A++G+  I EE+DA+R +G
Sbjct: 72  LLIEFGAGDFSGSGAALATVTQIGPLVTVLVVAGAGATAMCADLGARTIREELDALRVLG 131

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ +  L+ PR+ A      LL+ +   + ++G          +    F +         
Sbjct: 132 INPIGSLVVPRVLAATFVSLLLSGVVIVTGLVGGFEFSVFVQHVTPGSFAAGLTLLTGAR 191

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   L+KA        ++A  +G +VG  + ++G  V   VV S   +  ID +    
Sbjct: 192 ELVIALVKAGLFGLTASLIACYKGISVGRGAAAVGNAVNETVVFSFMSLFFIDVVVTAV 250


>gi|254818327|ref|ZP_05223328.1| hypothetical protein MintA_00285 [Mycobacterium intracellulare ATCC
           13950]
          Length = 261

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 98/234 (41%), Gaps = 1/234 (0%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177
           + +  + +   A  L  V   T  +     +    +      +  +G   + +V  ++  
Sbjct: 1   MSRIGDHTLFYARALAGVPFATAHYRREIIRLIAEISMGAGTLAMIG-GTLGIVGFMTLA 59

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
            G V+A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G+M+I
Sbjct: 60  AGGVLAVQGYSSLGNIGIEALTGFLSAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMRI 119

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+ +M +  V  L+S RI A ++++  L  +A   + + +  +    +     ++
Sbjct: 120 NEEIDALESMAIRPVSYLVSTRIVAGMLAVTPLYSIAVILSFVASQFITVFMFGQSSGLY 179

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
              F +     ++    ++A  MA  + ++    G+        +G      V 
Sbjct: 180 QHYFTTFLNPIDLLWSFLQAVLMALTVLLIHTYFGYFASGGPAGVGVATGNAVR 233


>gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str. MC2
           155]
 gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 266

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 92/239 (38%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G     +     + +         + Q +++        + +S     +I      
Sbjct: 20  LATVGGFFKMSVMTGKALFTRPFQWKEFVLQSWFLIRVAFLPTLAVSIPLTVLIIFTLNI 79

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L++FGA   S    ++  + ++G L+T +++AG   +AI A++G+  + EEIDA+  +G
Sbjct: 80  LLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTVREEIDALEVLG 139

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D +  L+ PR+ A      +L        ++G         ++    + S         
Sbjct: 140 IDPIERLVVPRVVASTFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAYVSTLTLLTGFP 199

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   ++KA       G+V    G  V   S  +G  V   +V  +  +  ++ +    
Sbjct: 200 EVLISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNETLVLCVVALFAVNVVLTTI 258


>gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_13890 [Mycobacterium kansasii ATCC
           12478]
          Length = 281

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 100/245 (40%), Gaps = 10/245 (4%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167
           ++ + +         +G      G+  A   +    +   ++R +  + +          
Sbjct: 9   RLTRQLQKPVGTLSRIGDHTLFYGKALAGAPFAATHYRREIVRLVAEISMGAGTLAMIGG 68

Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            + +V  ++   G  +A QG   L   G E  +  L + + +R    ++  + +A   G+
Sbjct: 69  TLVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 128

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
            + A++G+M+INEEIDA+ +M +  +  L+S RI A ++++  L  +A   + + +  V 
Sbjct: 129 GVTAQLGAMRINEEIDALESMAIRPISYLVSTRIVAGMLAITPLYSIAVILSFLASQFVT 188

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
              +     ++   F +     ++    ++A  MA  I ++    G+        +G   
Sbjct: 189 VVLFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMALTILLIHTYFGYFASGGPAGVGVAT 248

Query: 347 TTCVV 351
              V 
Sbjct: 249 GNAVR 253


>gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK]
 gi|315441805|ref|YP_004074684.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 290

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 109/276 (39%), Gaps = 1/276 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +        + +    G+ +    + +      +G +      +     +    +   
Sbjct: 9   RSRFPRGVARAEKIVGAPGRGLDSIGHVAWFVVTAVGSIGHAVRYYRKEMLRLIAEIGMG 68

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R    ++ 
Sbjct: 69  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVA 127

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
              +A   G+   AE+G+M+I+EEIDA+  MG+  +  L+S RI A  + +  L  +A  
Sbjct: 128 GQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLYAMAII 187

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + + A      +Y      +   F +     ++F   ++A  ++  + +     GF   
Sbjct: 188 MSFLSAQATTTIFYGQSTGTYEHYFRTFLRPDDVFWSFVQAVIISVIVMLNHCYYGFYAS 247

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
                +G+ V   +  S+  ++ +    ++  + + 
Sbjct: 248 GGPVGVGEAVGRSMRASLVAIVCVVLFASLALYGVD 283


>gi|167946701|ref|ZP_02533775.1| hypothetical protein Epers_09188 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 258

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 5/253 (1%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKF-----KGFLLSLIRQMYYVGVSGVPVVILIS 175
               S +    +  ++        S         +    + I Q+ + G+  +P + +++
Sbjct: 5   LGRRSLNYLLYIIDLVVFVMAVMRSWRNRGGLFNRASRAASITQLIFSGIDALPTITILA 64

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              G  +  Q  F    FG E     L++ L   E G LLTA+++ GRSGSAI  ++G+M
Sbjct: 65  LAVGLSVTTQLIFAAQVFGQEADVASLLANLVALEFGSLLTAIVMIGRSGSAIAVDLGNM 124

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            +N E++ +  +G+D     +SPR+  ++I+  +L I  +  +++    +          
Sbjct: 125 SLNREVEGLELLGIDVHAFFVSPRLIGMVIAQLVLAIYFSAFSLVTGITLAALLESTSNF 184

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            +     S     ++    IK       IG  A  +G +VG     + +     +V S+ 
Sbjct: 185 KYLFAVVSAFEPLDLLLFFIKNLLFGLVIGANACLKGLSVGQSVTQVPQVTQKAIVNSLV 244

Query: 356 IVIIIDSLFAIFY 368
           +V ++D +F +  
Sbjct: 245 MVFVLDGVFVLIL 257


>gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 [Mycobacterium sp. JLS]
 gi|126236562|gb|ABN99962.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 255

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 103/239 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   +   +      +        I Q ++V    +   +++S     +       
Sbjct: 11  VRALGDFFALAADTMMLIPRRPFAGREFILQTWFVARVSLVPTLMLSIPFTVLTVFTLNV 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    ++  + +IG L++ +++AG   +A+ A++GS  I EE+DA+R +G
Sbjct: 71  LLLEFGAGDFSGSGAALAAVTQIGPLVSVLVVAGAGATAMCADLGSRTIREELDALRVLG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ V+ L+ PR+ A  +   LL+ +   + ++G         ++    F +         
Sbjct: 131 INPVQALVVPRVLAATLVSLLLSGVVIVTGLVGGFGFSVFVQNVTPGSFVAGITLLTGAP 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            +   L+KA        ++A  +G +VG    ++G  V   VV S   + +ID +    
Sbjct: 191 ELGIALVKAGLFGLTASLLACYKGISVGGGPAAVGNAVNETVVYSFVSLFVIDVIVTAV 249


>gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M]
 gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B
           [Mycobacterium marinum M]
          Length = 289

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 7/254 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
            +             + + +++S   A  +   +  +G         K  L  + +    
Sbjct: 10  RFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYR--KEILRLIAQIGMG 67

Query: 163 VGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            G   V      +V  ++    ++IA QG   L   G E F+    +++ +R  G ++T 
Sbjct: 68  TGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAGPVVTG 127

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA   
Sbjct: 128 VALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLYALAMIM 187

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           +     +V    Y      +   F +     ++F   ++A  +A  + +     G+  G 
Sbjct: 188 SFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYGYNAGG 247

Query: 338 HSNSLGKKVTTCVV 351
               +G+ V   + 
Sbjct: 248 GPVGVGEAVGRSMR 261


>gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [Mycobacterium vanbaalenii PYR-1]
 gi|119958969|gb|ABM15974.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 280

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 108/261 (41%), Gaps = 1/261 (0%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
            F+ L     + +      +         V +    +   + +    +      +  +G 
Sbjct: 8   RFRRLLRFFPRAVDTVGEQALFYGETFRYVPNALTRYRKETIRLIAEMSMGTGALVMIG- 66

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G
Sbjct: 67  GTVGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIG 126

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M++ EEIDA+ +M +  V  L+S R+ A +I++  L  L+  +A   A   
Sbjct: 127 AGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFT 186

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     ++   F++    +++    ++A  M+ A+ +V    G+        +G  
Sbjct: 187 TVYINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIA 246

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +V+ I    ++
Sbjct: 247 VGQAVRTSLIVVVTIVLFISL 267


>gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 264

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 91/232 (39%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
                     + K        I   +++    +   I +S     ++       L++ GA
Sbjct: 25  FFRMCVLTGKALKQPFEWREFIWNGWFLMRVSLLPTIAVSIPETVLLIFTLNLLLAEIGA 84

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              S    +I  + ++G ++T +++AG  G+AI A++G+  I EEIDA+  +G+D +  L
Sbjct: 85  ADVSGAGAAIGAVTQLGPIVTVLVVAGAGGTAICADLGARTIREEIDALEVLGIDPIHRL 144

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A  +   LL  L     + G  +      ++    + S   +   L  +    I
Sbjct: 145 VVPRVVASTMVAVLLNGLVVAVGLGGGYLFSVYLQNVSSGAYLSTLTALTGLPEVVIAFI 204

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           KA       G+V    G  V   S  LG  V   VV     +  +++     
Sbjct: 205 KAATFGLIAGLVGCYRGLIVRGGSKGLGTAVNETVVLCFIALFAVNAALTTI 256


>gi|302523372|ref|ZP_07275714.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
 gi|318059764|ref|ZP_07978487.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actG]
 gi|318075808|ref|ZP_07983140.1| ABC-transporter integral membrane protein [Streptomyces sp.
           SA3_actF]
 gi|302432267|gb|EFL04083.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78]
          Length = 268

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 91/201 (45%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V+I ++  TG V+  QG   + Q G    +  + +    RE+  L+  + ++   G
Sbjct: 55  GTVGVMIGMTAATGTVVGLQGFAAMDQIGTAPLTGFVTAYFNTREVAPLVAGLALSATVG 114

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+INEE+DA+  MG+  +  L++ RI A ++++  L  L   S+ + + +V
Sbjct: 115 AGFTAQLGAMRINEEVDALEGMGIRAMPYLVTTRIIAGVVAIIPLYALGLLSSYVASRVV 174

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
              +       +   F+      ++   ++K    +  + +     GF        +G  
Sbjct: 175 TVVFNGQSSGTYDHYFNLFLVPEDVLLSVLKVLVFSVMVILAHCYYGFRAQGGPAGVGVA 234

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  +I ++ + D   ++
Sbjct: 235 VGRSVRNAIVLIAVTDFFLSL 255


>gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE3B [Mycobacterium marinum M]
 gi|183176211|gb|ACC41321.1| conserved hypothetical integral membrane protein, YrbE3B
           [Mycobacterium marinum M]
          Length = 284

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 14/260 (5%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169
           K +V+  N   SQ       ++   +        +  LL +I QM +      V    V 
Sbjct: 18  KSLVREWNRLGSQMRFYVTTLTGIPDAVMHY---RSELLRVIAQMGFGAGTLAVIGGTVV 74

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           +V  ++  TGA++A QG  Q +  G E  +    +    REI      V +A   G+   
Sbjct: 75  IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGAT 134

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+M+INEEIDA+  +G+  V  L S R+ A ++    L  +   +A + A       
Sbjct: 135 AQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAGTTAI 194

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
           Y     V+   F++     ++     +   +A  I +V    G+        +G+ V   
Sbjct: 195 YGQGSGVYDHYFNTFLRPTDVLWSSFEVVVVALMIMLVCTYYGYNAHGGPAGVGEAVGRA 254

Query: 350 -----VVQSISIVIIIDSLF 364
                VV SI+IVI+  +++
Sbjct: 255 VRASMVVASIAIVIMTLAIY 274


>gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane protein yrbE3B [Mycobacterium
           tuberculosis H37Ra]
 gi|215404241|ref|ZP_03416422.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           02_1987]
 gi|215411647|ref|ZP_03420443.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427324|ref|ZP_03425243.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T92]
 gi|215430875|ref|ZP_03428794.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis
           EAS054]
 gi|215446168|ref|ZP_03432920.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T85]
 gi|218753677|ref|ZP_03532473.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis GM
           1503]
 gi|219557919|ref|ZP_03536995.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T17]
 gi|254550985|ref|ZP_05141432.1| hypothetical protein Mtube_11071 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289447582|ref|ZP_06437326.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           CPHL_A]
 gi|298525459|ref|ZP_07012868.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|289420540|gb|EFD17741.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           CPHL_A]
 gi|298495253|gb|EFI30547.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 258

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 9/248 (3%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV-----PVVILISFVT 178
             SQ       ++   +        +G LL +I QM    GV  V      +V  ++  T
Sbjct: 1   MGSQMRFFVGTLAGIPDALMHY---RGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTT 57

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A QG  Q +  G E  +    +    REI      V +A   G+   A +G+M+IN
Sbjct: 58  GAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRIN 117

Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
           EEIDA+  +G+  +  L S R+ A ++    L  +   +A + A +     Y     V+ 
Sbjct: 118 EEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYD 177

Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358
             F++     ++    ++   +A  I +V    G+A       +G+ V   V  S+ +  
Sbjct: 178 HYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVAS 237

Query: 359 IIDSLFAI 366
           I   +  +
Sbjct: 238 IAILVMTL 245


>gi|291614199|ref|YP_003524356.1| hypothetical protein Slit_1738 [Sideroxydans lithotrophicus ES-1]
 gi|291584311|gb|ADE11969.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus
           ES-1]
          Length = 260

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 2/232 (0%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +           +         RQ+++ GV  + +V +   ++GA++  Q    +   G 
Sbjct: 27  LLWYAFTHLRVLRIPPVNAVFHRQIFFTGVEALRIVAVFGLLSGALVITQITSLVG--GD 84

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              ++ ++    +RE+G L  A++I  RS +AI +E+  MK   E+ ++  MG+     L
Sbjct: 85  SELTVKILIWTLVREVGPLFAAIIIIARSSAAIASELALMKTRHEMTSLYRMGIPPQDYL 144

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PRI  + +++  LTI     AI G   +   + ++ +     RF  T  L+       
Sbjct: 145 LVPRIAGVTLAVLGLTIYFQVVAIGGGLAISAMFQNVSYLDQVGRFLQTVKLSEFAVVAF 204

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           K      AI  ++   G         + K     V+QS+  V  +D++ A  
Sbjct: 205 KGCLFGLAISTISCYNGMQAQPSVTEVPKVAIKAVLQSLLFVFTLDAVIAYL 256


>gi|54024946|ref|YP_119188.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54016454|dbj|BAD57824.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 295

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 108/280 (38%), Gaps = 7/280 (2%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
                Q +   + ++        +  +  +        L   I+       +  +++  +
Sbjct: 3   AAPGGQWTTRPSPYRPPGLRWTLRTQRAWDPLEELGFQLRFGIAAVAGVGWALRRYRAQV 62

Query: 154 LSLIRQMY-------YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
           +++   +         VG    PV++++  V GA+I   G   L   G    +  + ++ 
Sbjct: 63  VAVFTDLAWGNGRAVIVGGGVAPVLVVMGVVAGAMIGLVGITALDTLGMGPLAGAMSALA 122

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
             RE+  L+ AV  A ++G  + AEIG+M+I EEIDA+    +D +  ++S R+ A +++
Sbjct: 123 NPRELAPLIAAVGFAAQAGCRMTAEIGAMRIAEEIDALEAQAIDPIPYVVSTRLLAAVLT 182

Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326
           +    ++A     +   + +   +      F   F       ++   L+K       +  
Sbjct: 183 VVPTYLIALALGFLTTKLTVTAVHGEAAGSFEHYFQMFVEPRDLVYSLVKVVIFVVIVTG 242

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
           V   +GF        +G      +  S+ ++   D +  +
Sbjct: 243 VHAYQGFYATGGPEGVGVASGRAIRASLVLIATADMVLTV 282


>gi|289645181|ref|ZP_06477196.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
 gi|289505006|gb|EFD26089.1| protein of unknown function DUF140 [Frankia symbiont of Datisca
           glomerata]
          Length = 286

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%)

Query: 132 LGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +G      G    ++ +  +G+  S   +MY +        +L       +IA      L
Sbjct: 38  VGQCGQLLGRLVTTAVRQPRGYWGSTRDEMYAMLRFCWLPCVLAVGGFTFLIANYAYDLL 97

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
           S  G +        +  +REI    T + +AG  G+A+ A++G+ +I EE+DA++ +G+D
Sbjct: 98  SLLGGQNRIGTYFVMASIREISPFCTGMAVAGVMGTAMAADLGARRIREELDALKVLGVD 157

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
             R+L+ PR+ A+ I     TI+     II A      +       +F+ F S+ T   +
Sbjct: 158 STRMLVLPRVLAITIMTVAFTIIGGLLGIIMAMTSATVFGTTSVGGYFANFLSSLTTPEL 217

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
              ++K+      IG+V  ++G  V   S  +G+ V   VV   + V +I+ + 
Sbjct: 218 VGVVVKSTLTGTFIGVVCAQKGLTVRGGSEGVGRAVNEAVVLCFAAVWVINFVL 271


>gi|324999479|ref|ZP_08120591.1| hypothetical protein PseP1_11961 [Pseudonocardia sp. P1]
          Length = 274

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 103/259 (39%), Gaps = 5/259 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVV 171
           +  +  ++D   QA   G  I+ T +   S      +    +      +  +G S + + 
Sbjct: 8   RAPLALLDDLGKQAEFYGKSIAWTPKAIKSYKTEQVRLIAEVGMSNGALAVIGGSSI-IT 66

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             I+   G     Q    LS    E       +I+  R +  ++    +A   GS   A+
Sbjct: 67  FFITMFAGVTGGVQTFDALSDLQLEALGGFTSAIIAPRLLTPIIGGAALAATVGSGFTAQ 126

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+++EEIDA+  MG+  +  L++ R+ A +I++  +  +A     IG  +    ++ 
Sbjct: 127 LGAMRVSEEIDALEVMGVRSLPYLVTTRLVAGMITIIPIFAMAMVGGWIGWKLTQVNFFG 186

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    +     +     ++     +   +A  + ++    G+        +G  V   V 
Sbjct: 187 LSAGTYDHYMTTFLQWEDVLYSFAQGLGIAIVVILIHTYYGYTASGGPAGVGLAVGKAVR 246

Query: 352 QSISIVIIIDSLFAIFYFA 370
            S+  V+ ++ + A+  + 
Sbjct: 247 TSLIAVLAVNLVIAMALYG 265


>gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str. MC2
           155]
 gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 272

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 15/263 (5%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--------- 167
           ++    +    Q       I + G+   +          LIR +  +G+           
Sbjct: 7   RVRAAWDGIGVQTQFYARAIGSIGDAAMNYR------TELIRLIATMGLGAGALAVVGGT 60

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V +V  ++  TGA++A QG  Q +  G E  +    +   +R I    TAV ++   G+ 
Sbjct: 61  VAIVGFLTMTTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAG 120

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M+INEEIDA+  +G+  V  L S R+ A +I +  L  +A   + I + +   
Sbjct: 121 ATAQLGAMRINEEIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTT 180

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
             Y     V+   F++     ++     ++  +   I +V    G+        +G+ V 
Sbjct: 181 VIYGQGSGVYDHYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPAGVGEAVG 240

Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370
             V  S+ +  I+  + ++  + 
Sbjct: 241 RAVRTSLIVAAIVVVMISLALYG 263


>gi|158520050|ref|YP_001527920.1| hypothetical protein Dole_0033 [Desulfococcus oleovorans Hxd3]
 gi|158508876|gb|ABW65843.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3]
          Length = 258

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 8/257 (3%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVI 172
           IG+K + +++   + A      I       AS  K +  +   ++ Q+Y+  V  + ++I
Sbjct: 8   IGRKTLAYVDHLQNMAAF---AIDLCAVLLASPLKGRAVVRWGVVEQIYFTAVQALFLII 64

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            +S +TG+++  Q     ++F  ++    LM IL +REIG ++TA+++  RS +A+  EI
Sbjct: 65  PLSLLTGSMMLIQ----FAKFSGQVDLGKLMIILVIREIGPVVTAMLVVLRSATAVTIEI 120

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G M +  EID++   G+D +R+L  PR   +  ++  L I+ +  AI+G   V+     I
Sbjct: 121 GYMNVFNEIDSLEMTGIDPLRLLAIPRFVGITSAIVCLFIVFDLVAILGGYGVVRLTTSI 180

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
           P   F S   S  T A+I  GL+KA      I +V +  GF        + K  +T  ++
Sbjct: 181 PVGNFLSDIGSAITGADIIVGLVKALCFGVVISVVTLYHGFEAQKRITVIPKITSTAAIE 240

Query: 353 SISIVIIIDSLFAIFYF 369
                I+ +   +  ++
Sbjct: 241 CFFYCIVTNIFISGLFY 257


>gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 243

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 92/219 (42%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
                   I Q +++        ++++     +I       L++FGA   S    ++  +
Sbjct: 17  RPFQWREFILQGWFLLGVSFLPTVMVAIPLTVLIIFTLNILLAEFGAADVSGAGAALGAV 76

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
            ++G L+T +++AG   +AI A++G+  I EEIDA+  +G+D +  L+ PR+ A  I   
Sbjct: 77  TQLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVASTIVAL 136

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
           LL        ++G  +      ++    + S       L  +   ++KA       G+V 
Sbjct: 137 LLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLPEVLISIVKATLFGLIAGLVG 196

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
              G   G  +  +G  V   +V ++  +  ++ +    
Sbjct: 197 CYRGLTAGGGAKGVGTAVNETLVLAVVALFAVNVVLTTI 235


>gi|317508277|ref|ZP_07965957.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253452|gb|EFV12842.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 280

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 110/256 (42%), Gaps = 4/256 (1%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVV 171
           + +    +   +    LG                + + +      I Q +++        
Sbjct: 15  RLVAYLFDTVLTSLRTLGRWFMLAFGAFRFLVVDTIRLRHPWKETIHQCWFITSVTAVPA 74

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           +L+S   G ++  Q      Q GA   +     +  +R+   ++ A+++ G +GSAI A+
Sbjct: 75  LLVSVPFGIIVMVQVGNLTQQIGAASLTGAAGGLGVIRQGAPIVAALLLGGAAGSAIAAD 134

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+  I EEIDA+R +G++  + L++PR+ A++   P+L +   F  +    ++   + D
Sbjct: 135 LGARTIREEIDAMRVIGINPTQRLVAPRLAAMLFVSPMLCVFIVFITMTAGYLLAVMFQD 194

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +    + + F + A L++I+  + K+ F    + IVA + G         + + V   VV
Sbjct: 195 VTPGSYLASFGAFAKLSDIYVAIGKSVFFGIVVVIVACQRGLETKFGPRGVAESVNASVV 254

Query: 352 QSISIVIIIDSLFAIF 367
             +    +++ +    
Sbjct: 255 LGVLATFVLNVVVTQI 270


>gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 [Mycobacterium gilvum PYR-GCK]
 gi|315442586|ref|YP_004075465.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|145214633|gb|ABP44037.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260889|gb|ADT97630.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 280

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 7/252 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILI 174
           + ++    QA   G                K  +  +       G        V V   +
Sbjct: 18  RAVDTVGEQALFYGETFRYVPNAITRYR--KETIRLIAEMSMGTGALVMIGGTVGVAAFM 75

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+   A++G+
Sbjct: 76  TLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGATAQLGA 135

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++ EEIDA+  M +  V  L+S R+ A +I++  L  L+  +A   A            
Sbjct: 136 MRVAEEIDAVEAMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTVYINGQSA 195

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
            ++   F++    +++    ++A  M+ A+ +V    G+        +G  V   V  S+
Sbjct: 196 GLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSL 255

Query: 355 SIVIIIDSLFAI 366
            +V+ I  + ++
Sbjct: 256 IVVVTIVLMISL 267


>gi|326330431|ref|ZP_08196739.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
 gi|325951706|gb|EGD43738.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1]
          Length = 256

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 1/233 (0%)

Query: 132 LGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +G      G    ++ K  +G+  +   +M+Y+       V L       +IA      +
Sbjct: 8   MGEAGRLLGYLVKTAVKEPRGYWTATRDEMFYMLQFCWLPVTLAVGGFSFLIANYAYDLV 67

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
              GA            LREI    T + +AG  G+A+ A++G+ KI EE+DA   +G+D
Sbjct: 68  GLLGAGNRLGTYFVFASLREISPFATGMAVAGVMGTAMTADLGARKIREELDAFTVLGID 127

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +R L+ PR+ A+ + +    I+ +   +  A I            F      + T+  +
Sbjct: 128 AIRTLVLPRVIAITVMMVAFNIVGSLLGMSMAMISATWLGTTSPGAFLGNLLGSMTVPEL 187

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363
               +K   +   IG+V+ ++G      +  +G+ V   VV S + V + + +
Sbjct: 188 VGTTVKCTLIGLFIGVVSAQKGLNAKGGAEGVGRAVNEAVVLSFAAVWVANFI 240


>gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104]
 gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 289

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 101/257 (39%), Gaps = 7/257 (2%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
               +          G    + ++D    A   G+ +++     +     K  L  + + 
Sbjct: 7   FRSRFPRAAENLNRYGLAAARGLDDVGQMAWFGGVALAHIPHALSHYR--KETLRLIAQI 64

Query: 160 MYYVGVSGV-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
               G   V      +V  ++    +++A QG   L   G E F+    +++ +R    +
Sbjct: 65  GMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPV 124

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A ++ +  L  LA
Sbjct: 125 VTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALA 184

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              + +   I     Y      +   F +     ++F   ++A  +   + I     G+ 
Sbjct: 185 MIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGYN 244

Query: 335 VGVHSNSLGKKVTTCVV 351
            G     +G+ V   + 
Sbjct: 245 AGGGPVGVGEAVGRSMR 261


>gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894376|gb|EFG74129.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 284

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 7/258 (2%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
           +        ++    N   +Q       ++           +K  +  + +     G   
Sbjct: 10  RAWPAEAAGRVAAGWNRVGAQVKFYATAVTEMRTAFLRY--WKEIIRLVAQMSLGTGALA 67

Query: 168 V-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           V      +V  ++  TGAVIA QG  QLS  G E  +  + + + +R I   +  V +A 
Sbjct: 68  VIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAA 127

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
             G+   A++G+M+I +EIDA+  M +  V  L+S R+ A ++ +  L  +A   A   A
Sbjct: 128 TIGAGATAQLGAMRIADEIDALEVMAVRSVAYLVSTRVAAGVVVVIPLYCVAVVCAFQAA 187

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
                  Y     V+   F +     ++    +     A A+ +V    G+        +
Sbjct: 188 RFGTTGIYGQSTGVYDHYFRTFLNSIDLLWSFVTVIAAAIAVMLVHTYYGYNASGGPAGV 247

Query: 343 GKKVTTCVVQSISIVIII 360
           G+ V   V  S+ ++ +I
Sbjct: 248 GRAVGHSVRTSLIVLTLI 265


>gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC
           13950]
          Length = 289

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 101/257 (39%), Gaps = 7/257 (2%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
               +          G    + ++D    A   G+ +++      +    K  L  + + 
Sbjct: 7   FRSRFPRAAENLNRYGLAAARGLDDIGQMAWFGGVALAHIPHALRNYR--KETLRLVAQI 64

Query: 160 MYYVGVSGV-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
               G   V      +V  ++    +++A QG   L   G E F+    +++ +R    +
Sbjct: 65  GMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPV 124

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
           +T + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A ++ +  L  LA
Sbjct: 125 VTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALA 184

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
              + +   I     Y      +   F +     ++F   ++A  +   + I     G+ 
Sbjct: 185 MIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAILITAVVMITHCFYGYN 244

Query: 335 VGVHSNSLGKKVTTCVV 351
            G     +G+ V   + 
Sbjct: 245 AGGGPVGVGEAVGRSMR 261


>gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 605]
 gi|289438890|gb|EFD21383.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis
           KZN 605]
          Length = 247

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 88/201 (43%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V +V  ++  TGA++A QG  Q +  G E  +    +    REI      V +A   G
Sbjct: 34  GTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVG 93

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A +G+M+INEEIDA+  +G+  +  L S R+ A ++    L  +   +A + A + 
Sbjct: 94  AGTTAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVG 153

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               Y     V+   F++     ++    ++   +A  I +V    G+A       +G+ 
Sbjct: 154 TTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEA 213

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +  I   +  +
Sbjct: 214 VGRAVRASMVVASIAILVMTL 234


>gi|260186936|ref|ZP_05764410.1| hypothetical protein MtubCP_13018 [Mycobacterium tuberculosis
           CPHL_A]
          Length = 254

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV-----PVVILISFVTGAVI 182
                  ++   +        +G LL +I QM    GV  V      +V  ++  TGA++
Sbjct: 1   MRFFVGTLAGIPDALMHY---RGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIV 57

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
           A QG  Q +  G E  +    +    REI      V +A   G+   A +G+M+INEEID
Sbjct: 58  AVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEID 117

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
           A+  +G+  +  L S R+ A ++    L  +   +A + A +     Y     V+   F+
Sbjct: 118 ALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFN 177

Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
           +     ++    ++   +A  I +V    G+A       +G+ V   V  S+ +  I   
Sbjct: 178 TFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAIL 237

Query: 363 LFAI 366
           +  +
Sbjct: 238 VMTL 241


>gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 289

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 6/237 (2%)

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGVP-----VVILISF 176
                   ++   +S  G+   + ++++  LL ++ QM    G   V      +V  I+ 
Sbjct: 27  RPLVEIGQMVWFALSAIGQIPFAVHRYRKELLRMVAQMGMGTGAMAVVGGTAAIVGFITL 86

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G+++A QG   L   G E F+  L +++ +R +  +     +A   G+   AE+G+M+
Sbjct: 87  SAGSLVAIQGYATLGNIGVEAFTGFLAALVNVRFVAPVAAGQALAATVGAGATAELGAMR 146

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           I+EEIDA+  M +  V  L S R+ A +I +  L  LA   A +   +     Y      
Sbjct: 147 ISEEIDALEVMSIRSVPFLASTRVVAGLIVIIPLYGLAMTMAFLSQQVTTVLLYGQSIGT 206

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
           +   FH+   L ++     +   +A  +       G+        +G+ V   +  S
Sbjct: 207 YNHYFHTFLRLNDVGWSFAEVILVAVVVMTTHCYYGYTATGGPVGVGEAVGRSMRLS 263


>gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC
           12478]
          Length = 272

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 13/270 (4%)

Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170
               G   V+ ++ +   A      + + G    +  +++   L LI Q+  +G   + V
Sbjct: 1   MNRYGGAAVRGLDTTGRLAWF---TLVSLGNVPFALSRYRKETLRLIAQI-GMGTGAMAV 56

Query: 171 VILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           V   + + G V       +A QG   L   G E F+    +++ +R    ++T V +A  
Sbjct: 57  VGGTAAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAAT 116

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
            G+   AE+G+M+I+EEIDA+  MG+  V  L + RI A +  +  L  +A   A +   
Sbjct: 117 VGAGATAELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPLYAMAMIMAFLSPQ 176

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           I     Y      +   F +     ++F   ++A  +   + +     G++ G     +G
Sbjct: 177 ITTTVLYGQSTGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMVSHCYYGYSAGGGPVGVG 236

Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + V   +  S+  + ++  + +      G+
Sbjct: 237 EAVGRSMRFSLVSIPVV--VLSAALALYGV 264


>gi|54027027|ref|YP_121269.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54018535|dbj|BAD59905.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 287

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 94/249 (37%), Gaps = 14/249 (5%)

Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184
             I+      A  +  K +   ++R    VG            + VV+++    G  +  
Sbjct: 33  QAITFFQALGAVPFVLKHYRKEVLRLTADVGWGNGSLVVGGGTIGVVVILCAFGGITVGM 92

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
           +    L+       +  +      RE+  +L  +  A ++G    A++GSM+I+EEIDA+
Sbjct: 93  ESFNALNLLTMGPLTGAISGFATTRELAPILATLAFAIQAGCRFTAQLGSMRISEEIDAL 152

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
            ++ +  +  L+S R+ A  +++  L  +   +A +   + +          +   F   
Sbjct: 153 ESIAIRPLPYLVSTRMIAATLTIVPLYTIGLATAYLATKLSVLFLGGTSAGTYDHYFFQF 212

Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
               ++F  L+K          +    G+        +G          I +VI++  +F
Sbjct: 213 LIGTDVFFSLLKVVIFVLLATFIQCYYGYVATGGPEGVGVAAGRA----IKMVIVV-MVF 267

Query: 365 AIFYFAIGI 373
           A  +  + I
Sbjct: 268 ANLFLTLAI 276


>gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS]
 gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS]
 gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
          Length = 296

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 105/261 (40%), Gaps = 1/261 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +    Y   + L     + +    + +      +G +      +     +    +   
Sbjct: 15  RQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMG 74

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  +G   V +V  ++   G++IA QG   L   G E F+    +++ +R    +++
Sbjct: 75  TGAMAVIG-GTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVS 133

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
              +A   G+   AE+G+M+I+EEIDA+  MG+  +  L+S RI A  I +  L  +A  
Sbjct: 134 GQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAII 193

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + + A +    +Y      +   F +     ++    ++A  ++  + I     G+   
Sbjct: 194 MSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMINHCYYGYYAS 253

Query: 337 VHSNSLGKKVTTCVVQSISIV 357
                +G+ V   +  S+  +
Sbjct: 254 GGPVGVGEAVGRSMRASLIAI 274


>gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99]
 gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B
           [Mycobacterium ulcerans Agy99]
          Length = 289

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 7/254 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
            +             + + +++S   A  +   +  +G         K  L  + +    
Sbjct: 10  RFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYR--KEILRLIAQIGMG 67

Query: 163 VGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            G   V      +V  ++    ++IA QG   L   G E F+    +++ +R  G ++T 
Sbjct: 68  TGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAGPVVTG 127

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA   
Sbjct: 128 VALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLYALAMIM 187

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           +     +V    Y      +   F +     ++F   ++A  +A  + +     G+  G 
Sbjct: 188 SFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYGYNAGG 247

Query: 338 HSNSLGKKVTTCVV 351
                G+ V   + 
Sbjct: 248 GPVGEGEAVGRSMR 261


>gi|330875108|gb|EGH09257.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 148

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 79/146 (54%), Gaps = 1/146 (0%)

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           SA+ AEIG+MK  E++ ++  +G+D ++ +++PR+WA  IS+P+L ++ +   I GAS V
Sbjct: 1   SALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWV 60

Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344
              +  +    F+S   ++ +   ++  G+IK+   A  +  +A+ +G+     S  + +
Sbjct: 61  AIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISR 120

Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370
             T  VV +   V+ +D +     F 
Sbjct: 121 ATTRTVVYASLAVLGLDFILTALMFG 146


>gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [Mycobacterium vanbaalenii PYR-1]
 gi|119957883|gb|ABM14888.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 281

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 92/232 (39%), Gaps = 10/232 (4%)

Query: 128 QAHILGLVISNTGEFCASSY-KFKGFLLSLIRQMYYVGVSG---------VPVVILISFV 177
               +G +        A      + +   ++R +  + +           + +V  ++  
Sbjct: 20  VLGRIGDMALFYARAAAGVPYALRFYRRDILRLIAEISMGAGTLAMIGGTLVIVGFLTLA 79

Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237
           TG  +A QG   L   G E  +  L + + +R    ++  + +A   G+ + A++G+M+ 
Sbjct: 80  TGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRT 139

Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297
           NEEIDA+  M +  +  L+S R+ A ++++  L  +A   + + +             ++
Sbjct: 140 NEEIDALEAMAIRPISFLVSTRLIAGMVAITPLYSVAVILSFLASRYTTVVLLGQSAGLY 199

Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
              F +  +  ++     +A  MA AI ++    G+        +G      
Sbjct: 200 DHYFATFLSPIDLLWSFAQAVLMAVAILLIHTYFGYNATGGPAGVGVATGDA 251


>gi|169628783|ref|YP_001702432.1| hypothetical protein MAB_1693 [Mycobacterium abscessus ATCC 19977]
 gi|169240750|emb|CAM61778.1| Conserved hypothetical protein (YrbE family?) [Mycobacterium
           abscessus]
          Length = 289

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 104/236 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F A     +      +RQ  ++  + V   +L++   G  ++ Q A    Q GA
Sbjct: 48  VHTLRYFVADLVMGRFQWAEFVRQAAFMAGTAVMPTVLVALPIGVTLSIQFALLAGQVGA 107

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ A+++A   GSA+ A++G   + EE  A+  MG+  VR L
Sbjct: 108 TSLAGAASGLAVVRQAASLVAAMLLASAVGSAMTADLGCRTMREETAAMEVMGVSVVRRL 167

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR  A I+    LT +  F   + + +            F S F S AT A++   L 
Sbjct: 168 VVPRFAAAIVIGIALTGVVCFVGFLASYLFNVFVQGGAPGSFVSTFASFATPADLLLALF 227

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           KA      + ++A ++G A       +   V   VV+S+ +++I++ + +  Y  +
Sbjct: 228 KAAAYGAIVAVIACQKGLAAHGGPTGVANSVNAAVVESVLLLMIVNVVVSQVYTML 283


>gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium 104]
 gi|118167346|gb|ABK68243.1| TrnB2 protein [Mycobacterium avium 104]
          Length = 294

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 13/290 (4%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
                 +P                  ++V   N   SQ       +S   +  A   ++K
Sbjct: 3   AAPARHRPMSVIPAPPRLARLSITLHRLVAGWNRLGSQTAFYVKALSLMWDAVA---RYK 59

Query: 151 GFLLSLIRQMYYVGVSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203
              L LI  M  +GV  + V+         +   TG+ I  Q    LS  G E  S    
Sbjct: 60  AETLRLIATM-SLGVGALAVIGGTVVVVTTLVMSTGSFIGIQLYRSLSDVGVEALSGFAS 118

Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263
           + L  R    L +A+ +A   G+   A++G+M+INEEIDA+  MG+  +  L S RI A 
Sbjct: 119 AYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRINEEIDALEVMGIRAISYLASTRIVAG 178

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           ++    L  L++ +  +    ++   +     V+   F++     ++   L++    A  
Sbjct: 179 VLVTVPLWCLSSLAGYLATRTLVVVAFGQAPGVYDHYFNTYLQPTDLIWSLLQVMATATV 238

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           + +V    GF        +G+ V   V  S  +V+ +    A+   A G+
Sbjct: 239 VMLVHTYYGFNATGGPAGVGEAVGRSVRAS--LVVAVTVQLAVAMAAYGV 286


>gi|254458766|ref|ZP_05072190.1| ABC transporter permease protein [Campylobacterales bacterium GD 1]
 gi|207084532|gb|EDZ61820.1| ABC transporter permease protein [Campylobacterales bacterium GD 1]
          Length = 262

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 108/265 (40%), Gaps = 4/265 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
                  IG K +  ++          L + +  +  + +   +  L    +Q+Y+  V 
Sbjct: 2   VLRFIEGIGDKTISMMSSFYEALRFTSLCLLHMIQPSSYNPAMRMVLT---KQIYFTTVQ 58

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+ + ++ + G+VI        +Q+  +     ++    + E     TA++I+ RSG+
Sbjct: 59  IIPLFMTMAILFGSVIIGVVIALATQYNLQDEIGSIIITFVIDEFSPFFTALLISLRSGA 118

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+  EI  M +N+E++ +    +D +  L  PRI + +IS   L+IL     +    I  
Sbjct: 119 AVNTEIAVMNVNKELNTLEKYKIDLIDYLFLPRIISGMISAVSLSILFAVIMLSSGYIFT 178

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346
             Y ++ F  +     S     ++   LIK+        ++ +  G        ++   V
Sbjct: 179 LFYMNMDFHTYKYILISAIEFKDLVVLLIKSMAFGFVTMLIPIYSGLKTTSAYTAIPVSV 238

Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371
              +V+    +  I+ + ++   ++
Sbjct: 239 LNGMVKLFIALFFIE-VLSLLLQSL 262


>gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 289

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 1/255 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      +        G+ +      +   A  LG +      +   + +    +   
Sbjct: 8   RARFPRAAENLNRYGGAAGRGLDDVGQMAWFGAVALGHIPHALRNYRKETLRLIAQIGMG 67

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  +G   V +V  ++    +++A QG   L   G E F+    +++ +R    ++T
Sbjct: 68  TGAMAVIG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVT 126

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            + +A   G+   AE+G+M+I+EEIDA+  MG+  +  L + RI A ++ +  L  LA  
Sbjct: 127 GIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALAMI 186

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
            + +   I     Y      +   F +     ++F   ++A  +   + I     G+  G
Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGYNAG 246

Query: 337 VHSNSLGKKVTTCVV 351
                +G+ V   + 
Sbjct: 247 GGPVGVGEAVGRSMR 261


>gi|225712538|gb|ACO12115.1| UPF0393 membrane protein RBE_1340 [Lepeophtheirus salmonis]
          Length = 215

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 1/199 (0%)

Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185
            +    +G   +   +    + K K +   +I +MY +G+  +P V  +S   GA++  Q
Sbjct: 1   MNIIEHVGKYTTLVYQALQPAEKKKVYYQQIIYEMYELGIKSIPFVAFVSIFVGAILTLQ 60

Query: 186 GAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244
            +  +       +          + E    + ++++AG+ GS I + IG+M++ E+IDA+
Sbjct: 61  TSANIKNPLIPKYLVGFATRESIMVEFSPTIISLLLAGKIGSNIASGIGTMRVTEQIDAL 120

Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304
             MG++    LI P+I AL++  P +  L+    + G  +         +  F       
Sbjct: 121 EIMGVNSAGYLIYPKIVALMLINPFIISLSIIIGVGGGWLAALMTGSTTYVQFIEGIQWD 180

Query: 305 ATLANIFTGLIKAPFMACA 323
             +      ++K    A  
Sbjct: 181 FNMMKYIYAMVKTILFAFL 199


>gi|54023080|ref|YP_117322.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014588|dbj|BAD55958.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 281

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 117/273 (42%), Gaps = 5/273 (1%)

Query: 96  QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNT-GEFCASSYKFKGFLL 154
            + + +   ++   +  +    +V  +        I    ++ T G+     ++++  LL
Sbjct: 3   PEIRTADRVSATAIVRKNFSDTVVSSLRTFGRAVGIAQESVTGTVGDLIRREFQWREALL 62

Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214
              R +    V  +    L++   G +++ Q    +   GA+        +  +++   +
Sbjct: 63  QAWRLVTVTAVPAI----LMAVPFGVIVSIQVGNLIHTLGADSLVGATGGLGVIKQGAPM 118

Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274
            T  ++ G   +AI A++G+  I EEIDA+ TMG+  +  L+ PR+ A++I  PLL +L 
Sbjct: 119 ATGFLLGGAGAAAIAADLGARTIREEIDALHTMGISPIHRLVIPRMVAMLIVAPLLNVLV 178

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
            F  ++    V     D+    +++ F S  + A+++  L KA      + I+A + G  
Sbjct: 179 IFVGVLAGYAVAIGGQDVTPGSYWATFGSFTSTADVWVSLGKALIFGFLVVIIACQRGLE 238

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                  +   V   VV S+  ++ ++ L    
Sbjct: 239 AKGGPRGVADAVNAAVVLSVVSIVCVNLLLTQV 271


>gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4]
 gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4]
          Length = 283

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 109/266 (40%), Gaps = 1/266 (0%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +  +   +       + I +    +   A  +G        +   + +    +      +
Sbjct: 6   AGRFPRTRRRFASASRSIDRLGEQALFFARAIGSAPRALVHYRRETLRLIAEISMGTGAL 65

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +
Sbjct: 66  AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A   G+   A++G+M+++EEIDA+ TM +  +  L+S R+ A +I++  L  LA  ++ +
Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            +       YD    V+   F +     +I     +A  MA AI ++    GF       
Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGPV 244

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366
            +G  V   V  S+  V+ +  L ++
Sbjct: 245 GVGVAVGNAVRSSLIAVVTVTLLISL 270


>gi|226304400|ref|YP_002764358.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494174|ref|ZP_04387937.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226183515|dbj|BAH31619.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318536|gb|EEN84394.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 285

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 106/260 (40%), Gaps = 10/260 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GVSGVPVV 171
           +  +      LG  ++      AS  +    +   ++ Q+  V         G   + +V
Sbjct: 17  LRTAGDGLVSLGQHVTFYVRTIASIPFALTKYRKHVLGQISEVSFGTNSLLSGGGTIGIV 76

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             +S     ++  +    L   G    S  L ++   RE+  ++ A+ +A + G+   A+
Sbjct: 77  FAMSLAAAMMLGVETHRGLELVGMTSLSGMLSAVANTRELAPVVVAIALAAKVGTGFTAQ 136

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           IG+M+I++EIDA+ +M +  +  L   R+ A +I +  + ++   ++ +   +V+  +  
Sbjct: 137 IGAMRISDEIDALDSMAIRSIPFLAGTRVIAAMICVIPIYMIGLLASYLSTRLVVVFFNG 196

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
                +   FH   +  ++    +KA   A  + +V    G+        +G+     + 
Sbjct: 197 ASAGTYDYFFHLAISPQDLLYSGLKAVVFAAVVALVHCAYGYYASGGPAGVGQAAGRALR 256

Query: 352 QSISIVIIIDSLFAIFYFAI 371
            +I  + I+D L     + +
Sbjct: 257 TAILAIGILDVLMTFALWGL 276


>gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [Mycobacterium smegmatis str. MC2
           155]
 gi|118172178|gb|ABK73074.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 256

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 103/239 (43%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG   + T +   +  +        + Q ++V    +   ++++     ++      
Sbjct: 11  VGALGGFFAMTLDVFITIARPPFAWREYLNQTWFVARVSLVPALMLTVPYTVLLVFTFNI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    +I  + +IG ++T +++AG   +A+ A++G+  I EE+DA+R MG
Sbjct: 71  LLIEFGAADFSGTGAAIGTVSQIGPIVTVLVVAGAGSTAMCADLGARTIREELDAMRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D ++ L+ PR+ A       L+       + G  +       +P   F +        A
Sbjct: 131 IDPIQALVVPRVLAATTVALALSATVIIVGLAGGFVFAVFIQHVPPGSFVAGLTVLTHGA 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           ++   L KA     + G++A  +G +VG     +G  V   VV +   +  I+ +    
Sbjct: 191 DVAVALAKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINVIATAV 249


>gi|83584337|gb|ABC24943.1| plastid permease-like protein [Prototheca wickerhamii]
          Length = 248

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 81/155 (52%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +   G+      + K    + + Q+  VG   + V +L SF  G V   Q   + ++ G 
Sbjct: 94  LVIAGQSIWRICQGKIHWRNTLEQLNLVGPRSLGVCLLTSFFLGMVFTIQFIREFTRLGL 153

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
                 ++ +   RE+  ++T++++AGR GSA  AE+G+M+++E+ D++R +G D +  L
Sbjct: 154 TRTVGGVLGLALARELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPIDYL 213

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           I+PRI A +I+ PLL I+        + ++    Y
Sbjct: 214 ITPRILACMIATPLLNIMCLCMGFAASMLLAEAAY 248


>gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1]
 gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 289

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 96/236 (40%), Gaps = 1/236 (0%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +    + +      +G +      +     +    +      M  VG   V +V  ++
Sbjct: 27  RGLEAMGHVAVFVVTAVGSIGHALRFYRREMLRLIAEIGMGTGAMAVVG-GTVAIVGFVT 85

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
               +++A QG   L   G E F+    +++ +R    ++    +A   G+   AE+G+M
Sbjct: 86  LSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVAGQALAATVGAGATAELGAM 145

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           +I+EEIDA+  MG+  +  L+S RI A  + +  L  +A   + + A +    +Y     
Sbjct: 146 RISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLYAMAIIMSFLSAQVTTTVFYGQSVG 205

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
            +   F +     ++F   I+A  ++  + +     GF        +G+ V   + 
Sbjct: 206 TYEHYFRTFLRPDDVFWSFIQAVIISVIVMLNHCYYGFYASGGPVGVGEAVGRSMR 261


>gi|108761681|ref|YP_632089.1| hypothetical protein MXAN_3909 [Myxococcus xanthus DK 1622]
 gi|108465561|gb|ABF90746.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 257

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 114/262 (43%), Gaps = 9/262 (3%)

Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168
            L   +G+  +  +  + +   ++G  +             K     L R +   G   +
Sbjct: 2   ALLTRLGRTALDALRGTGALGLVVGRTVLAL---------PKLERRELGRALVQFGYGSL 52

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           P+ +  + + G ++  Q    + +FGA  F         L E G LL  ++++ R G+  
Sbjct: 53  PLALATAALAGIIVVLQSGIYVQRFGARAFLGWAAGYGVLWEFGPLLLGLIMSARLGARN 112

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            AE+  M++  +I+ +R +GLD   IL++PR+ A+ +S+  L+ +    AI+  S+    
Sbjct: 113 AAELALMQVGGQIEGLRGIGLDPFAILVAPRVVAMEVSMLALSGVTFAVAILFESVAALL 172

Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348
              +P  VFF  F       ++  G++K      AI +++   G +    ++++G+    
Sbjct: 173 ALGLPVRVFFGTFSQLLGPLDLLGGVVKTGIFGLAIALLSTTVGLSARGGAHAVGQAAAN 232

Query: 349 CVVQSISIVIIIDSLFAIFYFA 370
            VV+S + + ++D         
Sbjct: 233 AVVRSCAAIFVLDFALTSLLAG 254


>gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [Mycobacterium sp. KMS]
 gi|120401521|ref|YP_951350.1| hypothetical protein Mvan_0499 [Mycobacterium vanbaalenii PYR-1]
 gi|126434219|ref|YP_001069910.1| hypothetical protein Mjls_1626 [Mycobacterium sp. JLS]
 gi|145221252|ref|YP_001131930.1| hypothetical protein Mflv_0653 [Mycobacterium gilvum PYR-GCK]
 gi|315441853|ref|YP_004074732.1| ABC-type transporter involved in resistance to organic solvents,
           permease [Mycobacterium sp. Spyr1]
 gi|49072909|gb|AAT51760.1| TrnB2 [Mycobacterium vanbaalenii PYR-1]
 gi|119693807|gb|ABL90880.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|119954339|gb|ABM11344.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
 gi|126234019|gb|ABN97419.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
 gi|145213738|gb|ABP43142.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK]
 gi|315260156|gb|ADT96897.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Mycobacterium sp. Spyr1]
          Length = 285

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 15/244 (6%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVI 172
             D   QA   G  IS+T +   +          ++RQ+  +G+           V VV 
Sbjct: 25  WRDLGDQARFYGQSISSTVQAATTYR------AEVLRQIAAIGLGAGSLAVVGGTVAVVA 78

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++  T A +A Q   Q+SQ G E  +    + + +R      +A   A   G+   A++
Sbjct: 79  FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
           G+MKINEEIDA+  MG+  +  L S R+ A +I +  L  +A   +     ++   +Y  
Sbjct: 139 GAMKINEEIDALAVMGIRPIAYLASTRLLAGVIVVVPLYCVALLMSFFSVRVITTAFYGQ 198

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
              VF   F +      +F         A  I ++    G         +G+ V      
Sbjct: 199 GSGVFDHYFDTFLNPQAVFFSFAVTVAAALVIMLIHTYYGLNATGGPAGVGEAVGRATRT 258

Query: 353 SISI 356
           S+  
Sbjct: 259 SLIA 262


>gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1]
 gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 283

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 109/266 (40%), Gaps = 1/266 (0%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +  +   +       + I +    +   A  +G        +   + +    +      +
Sbjct: 6   AGRFPRTRKRFASASRSIDRLGEQALFFARAIGWAPRALMHYPKETLRLIAEISMGTGAL 65

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +
Sbjct: 66  AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A   G+   A++G+M+++EEIDA+ TM +  +  L+S R+ A +I++  L  LA  ++ +
Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            +       YD    V+   F +     +I     +A  MA AI ++    GF       
Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGPV 244

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366
            +G  V   V  S+  V+ +  L ++
Sbjct: 245 GVGVAVGNAVRSSLIAVVTVTLLISL 270


>gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN]
 gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923]
 gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae]
 gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923]
          Length = 289

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 11/256 (4%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
            +          G    + I+D    +      +   G    +  +++   L LI Q+  
Sbjct: 10  RFPRAAANLNRYGGAAARGIDDIGQMSWFG---LIALGNIPNALSRYRKETLRLIAQI-G 65

Query: 163 VGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +G   + VV   + + G V       +A QG   L   G E F+    +++ +R    ++
Sbjct: 66  MGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVI 125

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           T +++A   G+   AE+G+M+I+EEIDA+  M +  +  L++ RI A ++ +  L  +A 
Sbjct: 126 TGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAM 185

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A +   I+    Y      +   F +     ++F   ++A  +   + I     G+  
Sbjct: 186 IMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYGYTA 245

Query: 336 GVHSNSLGKKVTTCVV 351
                 +G+ V   + 
Sbjct: 246 NGGPVGVGEAVGRSMR 261


>gi|118467026|ref|YP_884172.1| ABC transporter transmembrane protein [Mycobacterium avium 104]
 gi|118168313|gb|ABK69210.1| ABC transporter integral membrane protein [Mycobacterium avium 104]
          Length = 235

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 99/219 (45%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
            +     +I Q + +        +L++   GA++A Q +  +++ GA         +  L
Sbjct: 7   LRLPFGEVIVQAWTLLKVTALPAVLMAIPFGAMVAVQLSGLVNEVGANSLVGSATGVAVL 66

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
           R+   +   +++ G + SAI ++ G+  I EE+DA++T+G+D VR L+ PR   L++  P
Sbjct: 67  RQGAPVTAGLLMGGAAASAIASDFGARAIREELDALKTLGIDPVRRLVVPRFLGLLLITP 126

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L ++     +  A ++      +    F+  F S A + +++  + K    A  + +++
Sbjct: 127 SLVVIVIAMGVGAAFVIATVVNGVTPGSFWLSFGSFAKMVDLWFTMGKGFIFAGIVAVIS 186

Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            + G         +   V   VV ++  +++++      
Sbjct: 187 SQRGMEAKGGPRGVADAVNASVVLNVIFIVVVNLAITQL 225


>gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229494442|ref|ZP_04388205.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
 gi|226183563|dbj|BAH31667.1| putative YrbE family protein [Rhodococcus erythropolis PR4]
 gi|229318804|gb|EEN84662.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis
           SK121]
          Length = 283

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 1/266 (0%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
           +  +   +     I + I    + +   A  LG        +   + +    +      +
Sbjct: 6   AGRFPRTRRQIGSISRSIDSIGDQALFFAKALGHAPKALMRYPRETLRLIAEISMGTGAL 65

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
             +G   V +V  ++  TG  IA QG   L   G E  +    + + +R    ++  + +
Sbjct: 66  AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A   G+   A++G+M+++EEIDA+ TM +  +  L+S R+ A +I++  L  LA  ++ +
Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYSLAVIASFV 184

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
            +       Y+    V+   F +     +I     +A  MA A+ ++    GF       
Sbjct: 185 ASRFATVFLYNQSGGVYDHYFTTFLIPTDILWSFAQAIVMALAVMLIHTYYGFNATGGPV 244

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366
            +G  V   V  S+  V+ +  L ++
Sbjct: 245 GVGVAVGNAVRASLIAVVTVTLLISL 270


>gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_15460 [Mycobacterium kansasii ATCC
           12478]
          Length = 284

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 9/263 (3%)

Query: 105 NSFKNLHYHIGKK--IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
              + L +  G+   +V   N    Q       I+            K  L  + +    
Sbjct: 5   PPAERLAWIGGRASGLVAGWNRVGIQVAFYARTIAEMRTAFGRYG--KEILRLIAQMSLG 62

Query: 163 VGVSGV-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217
            G   V      +V  ++  TGAVIA QG  QLS  G E  +  + + + +R I   +  
Sbjct: 63  TGALAVIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAG 122

Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
           V +A   G+   A++G+M+I EEIDA+  M +  V  L+S R+ A ++ +  L  +A   
Sbjct: 123 VGLAATIGAGATAQLGAMRIAEEIDALEVMAVRSVAYLVSTRVVAGVVVVIPLYCIAVVC 182

Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
           A   A       Y     V+   F +     ++    +     A AI +V    G+    
Sbjct: 183 AFQAARFGTTGVYGQSTGVYDHYFRTFLNSTDLLWSFLTVIAAAIAIMLVHTHYGYTAKG 242

Query: 338 HSNSLGKKVTTCVVQSISIVIII 360
               +G  V   V  S+ ++ +I
Sbjct: 243 GPAGVGAAVGHSVRTSLIVLTLI 265


>gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99]
 gi|118570403|gb|ABL05154.1| conserved hypothetical integral membrane protein, Yrb3B
           [Mycobacterium ulcerans Agy99]
          Length = 230

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 85/201 (42%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V +V  +   TGA++A QG  Q +  G E  +    +    REI      V +A   G
Sbjct: 17  GTVVIVGFLGMTTGAIVAVQGYNQFASVGVEALTGFASAFFNAREIQPGTVMVALAATVG 76

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+INEEIDA+  +G+  V  L S R+ A ++    L  +   +A + A   
Sbjct: 77  AGATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAG 136

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               Y     V+   F++     ++     +   +A  I +V    G+        +G+ 
Sbjct: 137 TTAIYGQGSGVYDHYFNTFLRPTDVLWSSFEVVVLALMIMLVCTYYGYNAHGGPAGVGEA 196

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +  I   +  +
Sbjct: 197 VGRAVRASMVVASIAIVIMTL 217


>gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium intracellulare ATCC 13950]
          Length = 282

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 62/278 (22%), Positives = 111/278 (39%), Gaps = 13/278 (4%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
                         ++V   N   SQ       +S   +  A   ++K   L LI  M  
Sbjct: 3   PAPPRLARLSITLHRLVAGWNRLGSQTAFYVKALSLVWDAVA---RYKAETLRLIATM-S 58

Query: 163 VGVSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
           +G+  + ++         +   TGA I  Q    LS  G E  S    + L  R    L 
Sbjct: 59  LGIGALAIIGGTVVVVTTLVMSTGAFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLT 118

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           +A+ +A   G+   A++G+M+INEEIDA+  MG+  +  L S RI A ++    L  L++
Sbjct: 119 SAIGLAATIGAGATAQLGAMRINEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSS 178

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
            +  +    ++   +     V+   F++     ++   L++    A  + +V    GF  
Sbjct: 179 LAGYLATRTLVVVAFGQAPGVYDHYFNTYLQPTDLIWSLLQVIATATVVMLVHTYYGFNA 238

Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
                 +G+ V   V  S  +V+ +    A+   A G+
Sbjct: 239 TGGPAGVGEAVGRSVRAS--LVVAVTVQLAVAMAAYGV 274


>gi|224369539|ref|YP_002603703.1| ABC-type transport system involved in resitance to organic
           solvents, permease protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223692256|gb|ACN15539.1| ABC-type transport system involved in resitance to organic
           solvents, permease protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 278

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 106/269 (39%), Gaps = 10/269 (3%)

Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164
           N    L   +GK    F++ +     +     +   +     +  +    +  RQ+   G
Sbjct: 14  NPLWRLLGALGKSTTAFVSMAVYLTAL---AFTILVQATKPRHWRRTVRKAFSRQLLETG 70

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           +  +  V L++   G ++  Q    L + G   +   L  ++ +RE+  LLT +++  ++
Sbjct: 71  IKTIIPVGLVALFIGVLVVMQAQLWLGKLGQTEWLGPLFVVVVVRELAPLLTNLIMILQN 130

Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284
           GS + +E+  M ++ ++  +   G+D +  LI PR+ A ++S   LT+L    +++   +
Sbjct: 131 GSKMTSELAGMTVSGKVRMLDAQGIDPLIYLILPRVTATVVSTFCLTLLFIVFSLVSGYL 190

Query: 285 VIWKYYDI--PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
             +          +F  +        ++   L+          ++   EG  + +   ++
Sbjct: 191 FSFALGLRLLAPQIFLDQILRALQSRDLLNLLLTGMIPPLLTTVICCSEGLCLSLTRATV 250

Query: 343 GKKV----TTCVVQSISIVIIIDSLFAIF 367
                   T   V S+ ++ +  S+    
Sbjct: 251 PNATSLALTRSTV-SLFLISVTISVLTYL 278


>gi|296141463|ref|YP_003648706.1| hypothetical protein Tpau_3789 [Tsukamurella paurometabola DSM
           20162]
 gi|296029597|gb|ADG80367.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM
           20162]
          Length = 272

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 107/245 (43%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           + +  F     +    + L  S          K    +   I Q   +        IL++
Sbjct: 11  QLVAIFTRSLATIGKSVVLARSIVTWTVRGIVKGNFAVAETITQAVTLLRVTTLPAILVA 70

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
              GAV++ Q    +   GA         I  +R+   L T V++ G   SAI A++GS 
Sbjct: 71  VPFGAVVSVQVGALVDTVGANSLVGAASGIGIIRQGAPLATGVLLGGVCASAIAADLGSR 130

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
            + EE+ A++ MG+D +  LI+PR+ AL+I  P+L +     A++ A  V    + +   
Sbjct: 131 TVREELQAMQVMGVDPIARLIAPRMLALMIIAPMLLVAIVAVAMMVALTVSVWQFGLSSG 190

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355
            F+S F + +  +++   ++KA   A  +G+VA   G         +   V + VV SI+
Sbjct: 191 GFWSSFGAFSAPSDLAFAVLKAETGAMIVGLVAGLRGLEASGGPRGVADGVNSSVVLSIT 250

Query: 356 IVIII 360
           ++ + 
Sbjct: 251 LIFLA 255


>gi|251773083|gb|EES53637.1| probable ABC transporter, permease [Leptospirillum
           ferrodiazotrophum]
          Length = 146

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 66/138 (47%)

Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290
           E+G M   ++I+A+  MG+D V  L++P+I A ++ LP+L+++ +F  ++    V     
Sbjct: 1   ELGMMSTTQQIEALLVMGVDPVDRLVAPKILAGMVMLPVLSVVGDFLGVLAGLAVAMFGA 60

Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350
            +   +++S   +  T  N+  G++K       +  +    G      +  +G+  T  V
Sbjct: 61  HVAAPLYWSGVRTALTPPNLVNGIVKPFVFGFILVSIGCFYGLRTTGGAQGVGRATTKAV 120

Query: 351 VQSISIVIIIDSLFAIFY 368
           V +   ++I + L +   
Sbjct: 121 VYAAIWILIANFLISKLL 138


>gi|296165592|ref|ZP_06848117.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899065|gb|EFG78546.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 318

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 106/261 (40%), Gaps = 8/261 (3%)

Query: 89  HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ----AHILGLVISNTGEFCA 144
           HR  +           + ++ +    G  + K  +   +         G  +        
Sbjct: 22  HRGALHRAPFGNGAAPDGWRAVLTQPGASVAKAASRVGAIPARSTATTGRAVLMAAAVLR 81

Query: 145 S----SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200
                +   +  +  LI Q + +        +L++   GA+IA Q +  +++ GA     
Sbjct: 82  YAVLDTISMRLPVGELIVQAWTLLKVTAVPAVLMAVPFGAMIAVQVSGLVNEVGANSLIG 141

Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260
             + +  +R+   +   +++ G + SAI A+ G+  I EE+DA+RT+G+D V+ L+ PR 
Sbjct: 142 SAIGVGVVRQGAPMTAGLLMGGAAASAIAADFGARAIREELDALRTLGIDPVQRLVVPRF 201

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            AL++  P+L  +   S +  A  +     D+    F+  F S A + +++  + K    
Sbjct: 202 LALVLIAPILCTIVIASGVAAAFTISVTVNDVTPGSFWLSFGSFAKMVDVWFAMGKTVTF 261

Query: 321 ACAIGIVAMKEGFAVGVHSNS 341
           A  + I++   G         
Sbjct: 262 AAFVAIISSMRGMEAKGGPRG 282


>gi|226329328|ref|ZP_03804846.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198]
 gi|225202514|gb|EEG84868.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198]
          Length = 180

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 87/157 (55%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179
           +    + +     G              +F+     L++Q+Y VGV  + ++++     G
Sbjct: 7   RIGTRALAIFATFGRAGIMLFRALVGKPEFRKQWPLLLKQLYNVGVQSLLIIMVSGLFIG 66

Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239
            V+  QG   L+ F AE     ++++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E
Sbjct: 67  MVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126

Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
           +I ++  M +D +R +++PR WA +IS+PLL+++   
Sbjct: 127 QISSLEMMAVDPLRRVVAPRFWAGLISMPLLSLIFCC 163


>gi|31747666|gb|AAO38315.1| Lfe134p2 [Leptospirillum ferrooxidans]
          Length = 138

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 69/138 (50%)

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M++ E+IDA  ++ ++    L++PR++A + +LPLLT LA+   I G   V      
Sbjct: 1   LGTMRVTEQIDAFTSLAVNPQTYLMTPRVFAGLTALPLLTALADLVGIAGGYFVAVILLG 60

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
           +P   +         L + ++GL+K+      + +++   GF     +  +G+ VT  VV
Sbjct: 61  LPHNSYVRGIAEYVNLHDFYSGLVKSAVFGGLLSLLSCHMGFYASGGAAGVGRSVTVAVV 120

Query: 352 QSISIVIIIDSLFAIFYF 369
            S   +++ D     + +
Sbjct: 121 ASSMAILVSDYFLTSWLY 138


>gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
 gi|325554471|gb|EGD24146.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Rhodococcus equi ATCC 33707]
          Length = 280

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVV 171
           +  + ++    QA      +             K  L  +       G   V      +V
Sbjct: 15  RTSRSVDRVGEQALFFWRALVWAPRALVHYK--KEVLRLIAEISMGTGALAVIGGTVVIV 72

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+   A+
Sbjct: 73  GFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTAQ 132

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+++EEIDA+ +M +  V  L+S R+ A +I++  L  LA  ++ + +       YD
Sbjct: 133 LGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLYD 192

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               V+   F +     +I     +A  MA A+ ++    GF        +G  V   V 
Sbjct: 193 QSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNASGGPVGVGVAVGNAVR 252

Query: 352 QSISIVIIIDSLFAI 366
            S+  V+ +  L ++
Sbjct: 253 ASLIAVVTVTLLISL 267


>gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2b [Rhodococcus equi 103S]
 gi|311887548|emb|CBH46860.1| putative integral membrane protein YrbE2B [Rhodococcus equi 103S]
          Length = 283

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVV 171
           +  + ++    QA      +             K  L  +       G   V      +V
Sbjct: 18  RTSRSVDRVGEQALFFWRALVWAPRALVHYK--KEVLRLIAEISMGTGALAVIGGTVVIV 75

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++  TG  IA QG   L   G E  +    + + +R    ++  + +A   G+   A+
Sbjct: 76  GFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTAQ 135

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           +G+M+++EEIDA+ +M +  V  L+S R+ A +I++  L  LA  ++ + +       YD
Sbjct: 136 LGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLYD 195

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
               V+   F +     +I     +A  MA A+ ++    GF        +G  V   V 
Sbjct: 196 QSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNASGGPVGVGVAVGNAVR 255

Query: 352 QSISIVIIIDSLFAI 366
            S+  V+ +  L ++
Sbjct: 256 ASLIAVVTVTLLISL 270


>gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 251

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 83/186 (44%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V +V  ++    +++A QG   L   G E F+    +++ +R    ++T + +A   G
Sbjct: 38  GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGIAMAATVG 97

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   AE+G+M+I+EEIDA+  MG+  +  L + RI A ++ +  L  LA   + +   I 
Sbjct: 98  AGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALAMIMSFLSPQIT 157

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               Y      +   F +     ++F   ++A  +   + I     G+  G     +G+ 
Sbjct: 158 TTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGYNAGGGPVGVGEA 217

Query: 346 VTTCVV 351
           V   + 
Sbjct: 218 VGRSMR 223


>gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           W-148]
          Length = 295

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G         +  L  +    
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71

Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
              G   V      ++  ++   G++IA QG   L   G E F+    ++   R    ++
Sbjct: 72  MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPIV 131

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           + V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA 
Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A     +V   +Y      +   F +     ++   +++   +A  + I     G+  
Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251

Query: 336 GVHSNSLGKKVTTCVV 351
                 +G+ V   + 
Sbjct: 252 SGGPVGVGQAVGRSMR 267


>gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
          Length = 295

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G         +  L  +    
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71

Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
              G   V      ++  ++   G++IA QG   L   G E F+    ++   R    ++
Sbjct: 72  MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           + V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA 
Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A     +V   +Y      +   F +     ++   +++   +A  + I     G+  
Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251

Query: 336 GVHSNSLGKKVTTCVV 351
                 +G+ V   + 
Sbjct: 252 SGGPVGVGQAVGRSMR 267


>gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 605]
 gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 605]
          Length = 294

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G         +  L  +    
Sbjct: 13  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 70

Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
              G   V      ++  ++   G++IA QG   L   G E F+    ++   R    ++
Sbjct: 71  MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 130

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           + V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA 
Sbjct: 131 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 190

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A     +V   +Y      +   F +     ++   +++   +A  + I     G+  
Sbjct: 191 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 250

Query: 336 GVHSNSLGKKVTTCVV 351
                 +G+ V   + 
Sbjct: 251 SGGPVGVGQAVGRSMR 266


>gi|324999496|ref|ZP_08120608.1| hypothetical protein PseP1_12046 [Pseudonocardia sp. P1]
          Length = 285

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 95/249 (38%), Gaps = 2/249 (0%)

Query: 124 DSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182
              +    +  +   +           + +   ++ Q   +      +++ +  V     
Sbjct: 28  GLRTGLETMADLARFSVRVVRDVPLALRLYPSEVLAQAGNLVRGSALIILFLIAVLALQS 87

Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242
              G F  +  G   ++  + S+  +R +  ++   ++A + G  IVAE+GSM+INEE+D
Sbjct: 88  GVGGHFIFANPGINSYAGAIYSVALMRGLVEVIFGWIVAAKIGCGIVAEMGSMRINEEVD 147

Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRF 301
           A+  MGL     L   R+ A ++ LP L + A         ++     +      F+   
Sbjct: 148 ALDVMGLRSRAYLAGTRVAAAMLVLPFLFVTALLVQFQAGYLMSVHGMNTVSEGAFYEYL 207

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361
           +    L +  T LI          IVA   G+        +G+     +  ++ ++  + 
Sbjct: 208 YLFQNLRDFITALIWGSVTGVMCVIVATFYGYNAKGGPVGVGESTARSMTVNLVLISALA 267

Query: 362 SLFAIFYFA 370
            +FA  ++ 
Sbjct: 268 VVFAQLFYG 276


>gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv]
 gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97]
 gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148660357|ref|YP_001281880.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra]
 gi|148821790|ref|YP_001286544.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis F11]
 gi|224988978|ref|YP_002643665.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797522|ref|YP_003030523.1| hypothetical protein TBMG_00595 [Mycobacterium tuberculosis KZN
           1435]
 gi|289446141|ref|ZP_06435885.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289573188|ref|ZP_06453415.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85]
 gi|289744302|ref|ZP_06503680.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|289760707|ref|ZP_06520085.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis GM 1503]
 gi|298524075|ref|ZP_07011484.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308231594|ref|ZP_07413029.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu001]
 gi|308370001|ref|ZP_07419915.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu002]
 gi|308370453|ref|ZP_07421552.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu003]
 gi|308371712|ref|ZP_07425924.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu004]
 gi|308373528|ref|ZP_07432668.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu005]
 gi|308374049|ref|ZP_07434638.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu006]
 gi|308375204|ref|ZP_07443071.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu007]
 gi|308376450|ref|ZP_07438864.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu008]
 gi|308377469|ref|ZP_07479264.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu009]
 gi|308378677|ref|ZP_07483457.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu010]
 gi|308379821|ref|ZP_07487689.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu011]
 gi|308395898|ref|ZP_07492196.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu012]
 gi|2222770|emb|CAB09950.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B
           [Mycobacterium tuberculosis H37Rv]
 gi|31617357|emb|CAD93465.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B
           [Mycobacterium bovis AF2122/97]
 gi|121492153|emb|CAL70618.1| Conserved hypothetical integral membrane protein yrbE2B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148504509|gb|ABQ72318.1| conserved hypothetical integral membrane protein YrbE2b
           [Mycobacterium tuberculosis H37Ra]
 gi|148720317|gb|ABR04942.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis F11]
 gi|224772091|dbj|BAH24897.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253319025|gb|ACT23628.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289419099|gb|EFD16300.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289537619|gb|EFD42197.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85]
 gi|289684830|gb|EFD52318.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|289708213|gb|EFD72229.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis GM 1503]
 gi|298493869|gb|EFI29163.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216591|gb|EFO75990.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu001]
 gi|308325672|gb|EFP14523.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu002]
 gi|308331898|gb|EFP20749.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu003]
 gi|308335685|gb|EFP24536.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu004]
 gi|308337264|gb|EFP26115.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu005]
 gi|308343189|gb|EFP32040.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu006]
 gi|308347056|gb|EFP35907.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu007]
 gi|308350999|gb|EFP39850.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu008]
 gi|308355633|gb|EFP44484.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu009]
 gi|308359588|gb|EFP48439.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu010]
 gi|308363516|gb|EFP52367.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu011]
 gi|308367197|gb|EFP56048.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           SUMu012]
 gi|328457305|gb|AEB02728.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           KZN 4207]
          Length = 295

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G         +  L  +    
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71

Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
              G   V      ++  ++   G++IA QG   L   G E F+    ++   R    ++
Sbjct: 72  MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           + V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA 
Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A     +V   +Y      +   F +     ++   +++   +A  + I     G+  
Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251

Query: 336 GVHSNSLGKKVTTCVV 351
                 +G+ V   + 
Sbjct: 252 SGGPVGVGQAVGRSMR 267


>gi|168702230|ref|ZP_02734507.1| hypothetical protein GobsU_22062 [Gemmata obscuriglobus UQM 2246]
          Length = 256

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 2/231 (0%)

Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183
           ++ +    LG + + T     +S+         +R  Y V + G+P+ ++     G VI 
Sbjct: 3   EAINFLERLGRLAAFTPRAVLASFTTLRRSGLWLRPFYSVTIGGLPLALVTGLALGVVIW 62

Query: 184 QQGAFQLSQFG--AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241
                 L++ G  A  +    ++   L E+  +   +++A R+G+++ AE+ SM+++E+I
Sbjct: 63  MHTRDVLARTGTGAVEYLPTFLAAAVLLELAPVGAGLIVAARTGASLGAELASMRVSEQI 122

Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301
           DA+  +G+  +R L+ PRI A + + PLL +L   +A+    I         F  + +  
Sbjct: 123 DAMELLGVSTIRALVGPRIVACVFAAPLLHVLIAATALGSGFIAELATGSTTFLKYNTAA 182

Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
                L ++    +K       +G+     G +    S  +G+  T  VV 
Sbjct: 183 VRELVLQDVIPAGLKTLVFGLIVGVTGCFAGLSAREGSEGVGRAATDSVVA 233


>gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T46]
 gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T17]
 gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T92]
 gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T46]
 gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T17]
 gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis
           T92]
          Length = 295

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G         +  L  +    
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRVSVVQIGWALRRYR--RETLRLVAEIG 71

Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
              G   V      ++  ++   G++IA QG   L   G E F+    ++   R    ++
Sbjct: 72  MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           + V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA 
Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A     +V   +Y      +   F +     ++   +++   +A  + I     G+  
Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251

Query: 336 GVHSNSLGKKVTTCVV 351
                 +G+ V   + 
Sbjct: 252 SGGPVGVGQAVGRSMR 267


>gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551]
 gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis C]
 gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis C]
 gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 295

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 7/256 (2%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
              Y          G    + +  + + A    + +   G         +  L  +    
Sbjct: 14  RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71

Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
              G   V      ++  ++   G++IA QG   L   G E F+    ++   R    ++
Sbjct: 72  MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131

Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
           + V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   ++ +  L  LA 
Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191

Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             A     +V   +Y      +   F +     ++   +++   +A  + I+    G+  
Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMIIHCYYGYTA 251

Query: 336 GVHSNSLGKKVTTCVV 351
                 +G+ V   + 
Sbjct: 252 SGGPVGVGQAVGRSMR 267


>gi|319951382|ref|ZP_08025207.1| YrbE family protein [Dietzia cinnamea P4]
 gi|319434979|gb|EFV90274.1| YrbE family protein [Dietzia cinnamea P4]
          Length = 187

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 80/173 (46%)

Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253
           G E  +    + + +R    ++  + +A   G+   A++G+M+++EEIDA+  M +D + 
Sbjct: 2   GVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGATAQLGAMRVSEEIDALEVMAIDSIT 61

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+S RI A +I++  L  LA  ++ + +     + Y     V+   F +     +I   
Sbjct: 62  YLVSTRIVAGMIAVVPLYSLAVIASFLASRFATVEIYGQSGGVYDHYFSTFLIPTDILWS 121

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366
            ++A  MA  I ++    G+        +G  V   V  S+  V+ +  L ++
Sbjct: 122 FVQAIAMAITIMLIHTYYGYNAAGGPAGVGSAVGNAVRTSLIAVVTVTLLVSL 174


>gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 292

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 7/262 (2%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
           +        Y          G   V+ +      A    + I  TG         +  L 
Sbjct: 5   SAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRHYR--RETLR 62

Query: 155 SLIRQMYYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            +       G   V      ++  ++   G++IA QG   L   G E F+    ++   R
Sbjct: 63  LVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR 122

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
               ++  V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   +  +  
Sbjct: 123 IAAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVP 182

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L  LA   A     +V   +Y      +   F +     ++   + +   +A  + I   
Sbjct: 183 LYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHC 242

Query: 330 KEGFAVGVHSNSLGKKVTTCVV 351
             G+        +G  V   + 
Sbjct: 243 YYGYTASGGPVGVGHAVGRSMR 264


>gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104]
 gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 292

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 7/262 (2%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
           +        Y          G   V+ +      A    + I   G         +  L 
Sbjct: 5   SAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQIGWALRHYR--RETLR 62

Query: 155 SLIRQMYYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            +       G   V      ++  ++   G++IA QG   L   G E F+    ++   R
Sbjct: 63  LVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR 122

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
               ++  V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   +  +  
Sbjct: 123 IAAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVP 182

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L  LA   A     +V   +Y      +   F +     ++   + +   +A  + I   
Sbjct: 183 LYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHC 242

Query: 330 KEGFAVGVHSNSLGKKVTTCVV 351
             G+        +G  V   + 
Sbjct: 243 YYGYTASGGPVGVGHAVGRSMR 264


>gi|108757210|ref|YP_632090.1| hypothetical protein MXAN_3910 [Myxococcus xanthus DK 1622]
 gi|108461090|gb|ABF86275.1| putative membrane protein [Myxococcus xanthus DK 1622]
          Length = 248

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 3/246 (1%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
                 G  +        +S +        + Q++ +G   V +V+      GAV+    
Sbjct: 3   GVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVTIA 62

Query: 187 AFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245
             Q  +F G           L +RE+G  ++A++ A R+G+A  AE+ +M +NE+++A+ 
Sbjct: 63  NSQARRFVGNVAVLGPAYFELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALE 122

Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305
               D    L++PR++A ++ +PLL IL   +A + A+ V    + +    F        
Sbjct: 123 MSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAAAVAQFAFGVDGRAFMD--PRYV 180

Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365
              ++   L+KA      I + A   G      + ++G+  T  VV +    ++ID   +
Sbjct: 181 DGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS 240

Query: 366 IFYFAI 371
           + +  +
Sbjct: 241 LAFQLL 246


>gi|262203810|ref|YP_003275018.1| hypothetical protein Gbro_3951 [Gordonia bronchialis DSM 43247]
 gi|262087157|gb|ACY23125.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247]
          Length = 283

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 7/220 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILISF 176
            +    QA      I             K  L  +       G        V VV  ++ 
Sbjct: 23  WDQVGDQALFYWDSIVAIPRALRLYK--KETLRLIAEISMGTGALAMIGGTVVVVGFLTL 80

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  IA QG   L+  G E  +    + + +R    +++ + +A   G+   A++G+M+
Sbjct: 81  FTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVISGIALAATIGAGATAQLGAMR 140

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           ++EEIDA+ TM +  +  L+S RI A +I++  L  LA+ ++ + +       Y     V
Sbjct: 141 VSEEIDALETMAISSIPYLVSTRIVAGLIAIIPLYALASLASFLASRFATVFIYGQSPGV 200

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +   F +    ++I    ++A  MA A+ ++    GF   
Sbjct: 201 YDHYFDTFLIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240


>gi|296165199|ref|ZP_06847746.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899388|gb|EFG78847.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 258

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 86/193 (44%)

Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195
           +     F       +      +RQ  ++  + V   IL+S      ++ Q A    Q GA
Sbjct: 38  VRTVQYFFFDLLTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 97

Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255
              +     +  +R+   L+ AV++A   GSAI A++GS  + EE DA+  MG+  +R L
Sbjct: 98  TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 157

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315
           + PR+ A ++    LT +  F+    + +    + +     F S F S AT  +I   L+
Sbjct: 158 VVPRLAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDIILALV 217

Query: 316 KAPFMACAIGIVA 328
           KA      + +V+
Sbjct: 218 KAIVFGAIVAVVS 230


>gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
 gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152]
          Length = 283

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 93/232 (40%), Gaps = 1/232 (0%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
            +         +   +      +   A  L  +      +   + +    +      +  
Sbjct: 8   RFPRAVRRVRRMSDSLDSVGKHAVFYAQALASIPRALMHYRTETIRLIAEISMGTGALAV 67

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
           +G   V +V  ++  +G  IA QG   L   G E  +    + L +R    +++ + +A 
Sbjct: 68  IG-GTVVIVGFLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVISGIGLAA 126

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
             G+   A++G+M+++EEIDA+ TM +  V  LI  R+ A +I++  L  LA  ++   A
Sbjct: 127 TIGAGSTAQLGAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVIASFFAA 186

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
                  Y     V+   F +    ++I     +A  MA A+ ++    G+ 
Sbjct: 187 RFATVVIYGQSAGVYDHYFSTFLIPSDILWSFSQAILMALAVMMIHTYYGYF 238


>gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 292

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 7/262 (2%)

Query: 95  NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154
           +        Y          G   V+ +      A    + I   G         +  L 
Sbjct: 5   SAPGALRARYPRTAANLDRYGGGTVRRLWQIGVFARFARVSIGQIGWALRHYR--RETLR 62

Query: 155 SLIRQMYYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
            +       G   V      ++  ++   G++IA QG   L   G E F+    ++   R
Sbjct: 63  LVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR 122

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
               ++  V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S RI   +  +  
Sbjct: 123 IAAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVP 182

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329
           L  LA   A     +V   +Y      +   F +     ++   + +   +A  + I   
Sbjct: 183 LYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWAVFEVVIIAVVVMITHC 242

Query: 330 KEGFAVGVHSNSLGKKVTTCVV 351
             G+        +G  V   + 
Sbjct: 243 YYGYTASGGPVGVGHAVGRSMR 264


>gi|260426504|ref|ZP_05780483.1| membrane protein [Citreicella sp. SE45]
 gi|260420996|gb|EEX14247.1| membrane protein [Citreicella sp. SE45]
          Length = 137

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 59/137 (43%)

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           MK+ E+IDA+ T+  + ++ L++PR+ A ++ +PLL  + +   I G   V         
Sbjct: 1   MKVTEQIDALVTLSTNPMKYLVAPRLLAGLVVVPLLVGVGDVIGIFGGWFVATSSLGFNP 60

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
           A +           ++ + L+K         ++    G   G  +  +G+     V  + 
Sbjct: 61  AAYLKNTLDFLEPLDVISSLVKGCAFGGIAALMGCYHGMHSGRGAQGVGRATKGSVEAAA 120

Query: 355 SIVIIIDSLFAIFYFAI 371
            +++  + L    +F+I
Sbjct: 121 VLILAANFLLTGVFFSI 137


>gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 283

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 103/246 (41%), Gaps = 7/246 (2%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILI 174
           + ++ S   A  +G V+   G    +    K  L  +       G        V ++  +
Sbjct: 21  RALDASGDVALFVGEVLRYLGFTLKNYR--KEVLRLIAEIGMGTGAMAAVGGTVAIIGFV 78

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           +   G++IA QG   L   G E F+    ++  +R +  ++T   +A   G+   A++G+
Sbjct: 79  TLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVTGTALAATVGAGATAQLGA 138

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+I+EEIDA+  MG+  V  L+S R+    I    L  +A   +   A +V   +Y    
Sbjct: 139 MRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVLLSFFSAQLVTTLFYAQSI 198

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354
             +   F++   + + +  L +   ++  + +     G+        +G  V   +  S+
Sbjct: 199 GTYDHYFNTFLRVNDFWYSLAETVAISAVVMLNHCYYGYNASGGPVGVGVAVGRSMRASL 258

Query: 355 SIVIII 360
             ++++
Sbjct: 259 IAIVMV 264


>gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c [Mycobacterium abscessus ATCC 19977]
 gi|169243199|emb|CAM64227.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 286

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 111/259 (42%), Gaps = 1/259 (0%)

Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167
                 +G+   KF   +   A  L  + +   ++   + +    +      +  +G   
Sbjct: 16  VRYMRGLGRSFDKFGEQALFYAQSLSYIPAALTKYRKETIRVLAEITMGTGALVMIG-GT 74

Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227
           V V + ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G+ 
Sbjct: 75  VGVAVFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAG 134

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
             A++G+M++ EEIDA+ TM +  +  L+S R+ A +I++  L  L+  +A   +     
Sbjct: 135 TTAQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTV 194

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
                   V+   F++     ++    ++A  M+  + +V    GF        +G  V 
Sbjct: 195 MINGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGPVGVGVAVG 254

Query: 348 TCVVQSISIVIIIDSLFAI 366
             V  S+ +V+++    ++
Sbjct: 255 QAVRTSLIVVVLVTLFISL 273


>gi|120401935|ref|YP_951764.1| hypothetical protein Mvan_0920 [Mycobacterium vanbaalenii PYR-1]
 gi|119954753|gb|ABM11758.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 255

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 102/239 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              +G   +   +    + +        I QM++V    +   +++S     +       
Sbjct: 11  MRAVGGFFATAVDTAVLAPQPPFAWREFIFQMWFVARVSIFPTVMLSIPFTVLSVFIFNI 70

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            L +FGA  FS    +   + +IG L+T +++AG + +A+ A++G+  I EE+DA+R MG
Sbjct: 71  LLVEFGAADFSGAGAAFGAVTQIGPLVTVLVVAGAAATAMCADLGARTIREELDAMRVMG 130

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           ++ ++ L+ PR+ A ++   LL  + +   ++G          +    F +       L 
Sbjct: 131 INPLQALVVPRVLATVVVALLLNSVVSVVGVVGGFFFSVFVQHVTPGAFVAGMTLFTGLP 190

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
            I   L KA        ++   +G +VG     +G  V   VV S   + +I+ +    
Sbjct: 191 EIIISLTKASLFGLVAALIGCYKGISVGGGPVGVGTAVNETVVFSFMALFVINVVVTAV 249


>gi|153846369|ref|ZP_01993858.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|149744914|gb|EDM56276.1| ABC-type transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
          Length = 220

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 2/192 (1%)

Query: 87  FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146
                   +                  +G    + +    S    +   +         +
Sbjct: 31  SLAELVPPSNIENAPQIPRGEDGFFERVGNATREMLVYVGSVVRFIKECVLVF--KLGIN 88

Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206
            +      ++       G   VP+++LI F+ G +IA +      QFGA +F  D + I 
Sbjct: 89  RRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQFGAVLFVADGIGIS 148

Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266
             RE+G L+TA++ AGR+G+A  AEIG+ K+NEEI+A+ T G+  V  L+ PRI+A ++ 
Sbjct: 149 MFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPVEFLVIPRIYASVLV 208

Query: 267 LPLLTILANFSA 278
           LPLLT+LA+   
Sbjct: 209 LPLLTVLADIIG 220


>gi|126433442|ref|YP_001069133.1| hypothetical protein Mjls_0833 [Mycobacterium sp. JLS]
 gi|126233242|gb|ABN96642.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 297

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 97/239 (40%), Gaps = 4/239 (1%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV----ILISFVTGAVIAQQGAF 188
           G  +    +           +   + +++    + + V     +L++   GA+     + 
Sbjct: 49  GRGVQLFADVLRYVVTDAITMRLAVGEVFVQAWTLLKVTTMPALLMAIPIGAITTIVTSG 108

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
            ++Q GA         +  +R+   L   +++   + S I A+ G+  I EE+DA+R MG
Sbjct: 109 LVNQLGATSLLGAAAGVGVIRQGAPLTAGLLMGAAAASTIAADFGARAIREELDAMRVMG 168

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +D VR L+ PR  AL++  PLL I    S    A ++     D+    F+  F +   + 
Sbjct: 169 VDPVRQLVVPRFLALLLISPLLCIFIVASGTASAFLMAVGASDVAPGSFWMSFGTFTKVV 228

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           +++  + K       + IV+   G         +   V + VV ++ +++  +      
Sbjct: 229 DVWFAIAKTVVFGAIVAIVSSLRGMEAKGGPRGVADAVNSSVVVNVVLIVFANLAITQL 287


>gi|215444701|ref|ZP_03431453.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T85]
 gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210]
          Length = 246

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 9/214 (4%)

Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
           +  + +    +R +  +G+           V ++  ++   G++IA QG   L   G E 
Sbjct: 5   WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVET 64

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+    ++   R    +++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S
Sbjct: 65  FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            RI   ++ +  L  LA   A     +V   +Y      +   F +     ++   +++ 
Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
             +A  + I     G+        +G+ V   + 
Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMR 218


>gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium
           tuberculosis H37Ra]
 gi|215402356|ref|ZP_03414537.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           02_1987]
 gi|215410129|ref|ZP_03418937.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425820|ref|ZP_03423739.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T92]
 gi|215429421|ref|ZP_03427340.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis
           EAS054]
 gi|218752228|ref|ZP_03531024.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis GM
           1503]
 gi|219556430|ref|ZP_03535506.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T17]
 gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185465|ref|ZP_05762939.1| hypothetical protein MtubCP_05439 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199593|ref|ZP_05767084.1| hypothetical protein MtubT4_05539 [Mycobacterium tuberculosis T46]
 gi|260203752|ref|ZP_05771243.1| hypothetical protein MtubK8_05504 [Mycobacterium tuberculosis K85]
 gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN
           R506]
 gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN
           V2475]
          Length = 246

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 9/214 (4%)

Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
           +  + +    +R +  +G+           V ++  ++   G++IA QG   L   G E 
Sbjct: 5   WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEA 64

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
           F+    ++   R    +++ V +A   G+   A++G+M+I+EEIDA+  MG+  +  L+S
Sbjct: 65  FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124

Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317
            RI   ++ +  L  LA   A     +V   +Y      +   F +     ++   +++ 
Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184

Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351
             +A  + I     G+        +G+ V   + 
Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMR 218


>gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS]
 gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS]
 gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS]
 gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS]
 gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS]
 gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS]
          Length = 265

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 99/258 (38%), Gaps = 1/258 (0%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +    G       +        +G  +        + ++        I Q +++      
Sbjct: 1   MTASSGGLTGYVRDQVRPGLEAVGGFVRMCVLTGKALFR-PFQWREFILQAWFLFRVSFL 59

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
             + +S     +I       L++FGA   S    ++  + ++G L+T +++AG   +AI 
Sbjct: 60  PTVAVSVPLTVLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAIC 119

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
           A++G+  I EEIDA+  +G+D +  L+ PR+ A      LL        ++G  I     
Sbjct: 120 ADLGARTIREEIDALEVLGIDPIHRLVVPRVVASTFVALLLNGAVITIGLVGGFIFGVYI 179

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349
            ++    + S       L  +   ++KA       G+V    G  VG  +  +G  V   
Sbjct: 180 QNVSAGAYVSTLTLVTGLPEVLISVVKATTFGLIAGLVGCYRGLTVGGGAKGVGTGVNET 239

Query: 350 VVQSISIVIIIDSLFAIF 367
           +V  +  +  ++ +    
Sbjct: 240 LVLCVVALFAVNVVLTTI 257


>gi|85860837|ref|YP_463039.1| ABC transporter permease [Syntrophus aciditrophicus SB]
 gi|85723928|gb|ABC78871.1| ABC transporter permease protein [Syntrophus aciditrophicus SB]
          Length = 269

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 4/271 (1%)

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
            F   S       IG K +       +        I +  +    +   K     ++ Q+
Sbjct: 3   PFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKM---VIVTQL 59

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
           Y+  V  +P+ I IS + G  +       +   G   +  +++    + E+   +T +M+
Sbjct: 60  YFTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLML 119

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280
           A RSG+AI  EI  MK+N+E DA+    +D    +  PRI   ++S+ LL  +     + 
Sbjct: 120 ALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLLNGVFTLVLLT 179

Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             +I     + I    + S   ++A   ++   L+K       I ++ ++ G        
Sbjct: 180 SGAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELT 239

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           S+   V   ++     ++II+ + ++   +I
Sbjct: 240 SIPIAVLNGMINVFIAIVIIE-VISLILSSI 269


>gi|326383098|ref|ZP_08204787.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198234|gb|EGD55419.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 283

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 7/220 (3%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILISF 176
            N    QA      I++           K  L  +       G        V VV  ++ 
Sbjct: 23  WNKIGDQALFYWDAIASIPRAIRLYK--KETLRLIAEISMGTGALAMIGGTVVVVGFLTL 80

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
            TG  IA QG   L+  G E  +    + + +R    ++  + +A   G+   A++G+M+
Sbjct: 81  FTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVIAGIALAATIGAGATAQLGAMR 140

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296
           ++EEIDA+  M +  V  L+S RI A ++++  L  LA  ++ + +       Y     V
Sbjct: 141 VSEEIDALEVMAISSVPYLVSTRIVAGLVAIIPLYSLAALASFLASRFATVVLYGQSSGV 200

Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           +   F +    ++I    ++A  MA A+ ++    GF   
Sbjct: 201 YDHYFSTFLIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240


>gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB]
          Length = 300

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      + +       + + +    +      +G +      +   + +    +   
Sbjct: 8   RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R  G ++T
Sbjct: 68  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA  
Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|291279860|ref|YP_003496695.1| ABC transporter permease [Deferribacter desulfuricans SSM1]
 gi|290754562|dbj|BAI80939.1| ABC transporter, permease [Deferribacter desulfuricans SSM1]
          Length = 258

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 4/223 (1%)

Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKF----KGFLLSLIRQMYYVGVSGVPVVIL 173
           I    +        L   I  + +   S +KF    K      +RQ+Y+ GV  +P+ I 
Sbjct: 5   IESLGSYVVGFFLFLQNYIIFSLQILKSLFKFNLFNKAIFSVYLRQVYFTGVQILPIYIF 64

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           IS + G  +    +  L   G       L+ +L +RE+G L+T ++++ RS +A+ AEI 
Sbjct: 65  ISLIFGIALVGILSKLLIDLGIYNELGKLLVLLIVRELGPLVTVILLSLRSSTAVGAEIS 124

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            MK++ EI+ +    +D +  L  PR+ A +  +  L+I  +F +I G  ++I     I 
Sbjct: 125 VMKLSGEIETLTFFEIDPLIYLFLPRVLAGLTCMVSLSIFFSFVSITGGYLLISFKLGIT 184

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
           F           ++++I     K       +  + +    +V 
Sbjct: 185 FDYLMKLIFDYISISDIAAFFYKTIMFGFFLMSIPIFSALSVK 227


>gi|215414033|ref|ZP_03422692.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           94_M4241A]
          Length = 298

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      + +       + + +    +      +G +      +   + +    +   
Sbjct: 17  RARFPRAVANLRQYGVAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 76

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R  G ++T
Sbjct: 77  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 135

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA  
Sbjct: 136 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 195

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 196 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 252


>gi|260203313|ref|ZP_05770804.1| hypothetical protein MtubK8_03240 [Mycobacterium tuberculosis K85]
          Length = 298

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      + +       + + +    +      +G +      +   + +    +   
Sbjct: 17  RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 76

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R  G ++T
Sbjct: 77  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 135

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA  
Sbjct: 136 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 195

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 196 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCYYGY 252


>gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis H37Ra]
 gi|215406161|ref|ZP_03418342.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           02_1987]
 gi|215425375|ref|ZP_03423294.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T92]
 gi|215433088|ref|ZP_03431007.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis
           EAS054]
 gi|215448447|ref|ZP_03435199.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T85]
 gi|218755902|ref|ZP_03534698.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis GM
           1503]
 gi|219555966|ref|ZP_03535042.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T17]
 gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185031|ref|ZP_05762505.1| hypothetical protein MtubCP_03117 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199171|ref|ZP_05766662.1| hypothetical protein MtubT4_03255 [Mycobacterium tuberculosis T46]
 gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210]
 gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN
           4207]
 gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN
           R506]
 gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN
           V2475]
          Length = 298

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      + +       + + +    +      +G +      +   + +    +   
Sbjct: 17  RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 76

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R  G ++T
Sbjct: 77  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 135

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA  
Sbjct: 136 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 195

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 196 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 252


>gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A]
 gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A]
          Length = 289

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      + +       + + +    +      +G +      +   + +    +   
Sbjct: 8   RARFPRAVANLRQYGVAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R  G ++T
Sbjct: 68  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA  
Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85]
 gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85]
          Length = 289

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      + +       + + +    +      +G +      +   + +    +   
Sbjct: 8   RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R  G ++T
Sbjct: 68  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA  
Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv]
 gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97]
 gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148659932|ref|YP_001281455.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra]
 gi|148821360|ref|YP_001286114.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis F11]
 gi|224988553|ref|YP_002643240.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797090|ref|YP_003030091.1| hypothetical protein TBMG_00169 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233557|ref|ZP_04926883.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis C]
 gi|254366620|ref|ZP_04982664.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|289441543|ref|ZP_06431287.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T46]
 gi|289445699|ref|ZP_06435443.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552420|ref|ZP_06441630.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 605]
 gi|289568067|ref|ZP_06448294.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T17]
 gi|289747935|ref|ZP_06507313.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis 02_1987]
 gi|289748644|ref|ZP_06508022.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T92]
 gi|289756233|ref|ZP_06515611.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289760270|ref|ZP_06519648.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289764284|ref|ZP_06523662.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis GM 1503]
 gi|306774258|ref|ZP_07412595.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu001]
 gi|306782790|ref|ZP_07421112.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu003]
 gi|306801753|ref|ZP_07438421.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu008]
 gi|307082301|ref|ZP_07491471.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu011]
 gi|308369322|ref|ZP_07417339.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu002]
 gi|308371608|ref|ZP_07425479.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu004]
 gi|308372825|ref|ZP_07430015.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu005]
 gi|308373908|ref|ZP_07434059.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu006]
 gi|308375089|ref|ZP_07442632.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu007]
 gi|308378565|ref|ZP_07483021.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu009]
 gi|308379713|ref|ZP_07487253.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu010]
 gi|308394823|ref|ZP_07491759.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu012]
 gi|2213505|emb|CAB09751.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B
           [Mycobacterium tuberculosis H37Rv]
 gi|31616931|emb|CAD93038.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B
           [Mycobacterium bovis AF2122/97]
 gi|121491727|emb|CAL70189.1| Conserved hypothetical integral membrane protein yrbE1B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124603350|gb|EAY61625.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis C]
 gi|134152132|gb|EBA44177.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504084|gb|ABQ71893.1| conserved hypothetical integral membrane protein YrbE1b
           [Mycobacterium tuberculosis H37Ra]
 gi|148719887|gb|ABR04512.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis F11]
 gi|224771666|dbj|BAH24472.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318593|gb|ACT23196.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414462|gb|EFD11702.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T46]
 gi|289418657|gb|EFD15858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437052|gb|EFD19545.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 605]
 gi|289541820|gb|EFD45469.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T17]
 gi|289688463|gb|EFD55951.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis 02_1987]
 gi|289689231|gb|EFD56660.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           T92]
 gi|289696820|gb|EFD64249.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289711790|gb|EFD75806.1| hypothetical integral membrane protein yrbE1B [Mycobacterium
           tuberculosis GM 1503]
 gi|289715834|gb|EFD79846.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|308217092|gb|EFO76491.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu001]
 gi|308328030|gb|EFP16881.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu002]
 gi|308332310|gb|EFP21161.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu003]
 gi|308336192|gb|EFP25043.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu004]
 gi|308339692|gb|EFP28543.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu005]
 gi|308343699|gb|EFP32550.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu006]
 gi|308347572|gb|EFP36423.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu007]
 gi|308351471|gb|EFP40322.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu008]
 gi|308352198|gb|EFP41049.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu009]
 gi|308356147|gb|EFP44998.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu010]
 gi|308360102|gb|EFP48953.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu011]
 gi|308367650|gb|EFP56501.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           SUMu012]
 gi|323717157|gb|EGB26366.1| hypothetical protein TMMG_00597 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905925|gb|EGE52858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           W-148]
 gi|328456877|gb|AEB02300.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864230|gb|AEB53198.1| conserved integral membrane protein YRBE1B [Mycobacterium
           tuberculosis]
          Length = 289

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%)

Query: 97  KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156
           + +      + +       + + +    +      +G +      +   + +    +   
Sbjct: 8   RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67

Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
              M  VG   V +V  ++    +++A QG   L   G E F+    +++ +R  G ++T
Sbjct: 68  TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126

Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276
            V +A   G+   AE+G+M+I+EEIDA+  MG+  +  L S RI A ++ +  L  LA  
Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186

Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333
            + +   I     Y      +   F +     ++F   ++A  +   + +     G+
Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243


>gi|219559567|ref|ZP_03538643.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T17]
 gi|260202679|ref|ZP_05770170.1| hypothetical protein MtubT4_21963 [Mycobacterium tuberculosis T46]
 gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T46]
 gi|289571733|ref|ZP_06451960.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T17]
 gi|289418016|gb|EFD15256.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T46]
 gi|289545487|gb|EFD49135.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T17]
          Length = 280

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 111/261 (42%), Gaps = 1/261 (0%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
            F+     + + +  F   +      +  V +    +   + +    +      +  +G 
Sbjct: 8   RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG- 66

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V   ++  +G VIA QG   L   G E     L + L +R +  ++  + +A   G
Sbjct: 67  GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALIGFLSAFLNVRVVAPVIAGIALAATIG 126

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A   
Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     ++   F++    +++    ++A  M+ A+ +V    G+     S  +G  
Sbjct: 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +V++I    ++
Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267


>gi|260188552|ref|ZP_05766026.1| hypothetical protein MtubCP_21372 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           CPHL_A]
 gi|289422160|gb|EFD19361.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           CPHL_A]
          Length = 280

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 112/261 (42%), Gaps = 1/261 (0%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
            F+     + + +  F   +      +  V +    +   + +    +      +  +G 
Sbjct: 8   RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG- 66

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G
Sbjct: 67  GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A   
Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     ++   F++    +++    ++A  M+ A+ +V    G+     S  +G  
Sbjct: 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +V++I    ++
Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267


>gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Rv]
 gi|15843112|ref|NP_338149.1| hypothetical protein MT3604 [Mycobacterium tuberculosis CDC1551]
 gi|31794676|ref|NP_857169.1| integral membrane protein YrbE4b [Mycobacterium bovis AF2122/97]
 gi|121639419|ref|YP_979643.1| integral membrane protein YrbE4b [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148663364|ref|YP_001284887.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra]
 gi|148824707|ref|YP_001289461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis F11]
 gi|215405541|ref|ZP_03417722.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|215413413|ref|ZP_03422097.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           94_M4241A]
 gi|215429006|ref|ZP_03426925.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T92]
 gi|215432468|ref|ZP_03430387.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           EAS054]
 gi|215447833|ref|ZP_03434585.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T85]
 gi|218755277|ref|ZP_03534073.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis GM
           1503]
 gi|224991915|ref|YP_002646604.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253800542|ref|YP_003033543.1| hypothetical protein TBMG_03545 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234086|ref|ZP_04927411.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis C]
 gi|254366846|ref|ZP_04982887.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552602|ref|ZP_05143049.1| hypothetical protein Mtube_19500 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260206867|ref|ZP_05774358.1| hypothetical protein MtubK8_21501 [Mycobacterium tuberculosis K85]
 gi|289555766|ref|ZP_06444976.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 605]
 gi|289576234|ref|ZP_06456461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85]
 gi|289747336|ref|ZP_06506714.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|289752221|ref|ZP_06511599.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T92]
 gi|289755630|ref|ZP_06515008.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289759659|ref|ZP_06519037.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|289763680|ref|ZP_06523058.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis GM 1503]
 gi|294995730|ref|ZP_06801421.1| hypothetical protein Mtub2_14798 [Mycobacterium tuberculosis 210]
 gi|297636156|ref|ZP_06953936.1| hypothetical protein MtubK4_18620 [Mycobacterium tuberculosis KZN
           4207]
 gi|297733156|ref|ZP_06962274.1| hypothetical protein MtubKR_18790 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526980|ref|ZP_07014389.1| ABC-transporter integral membrane protein [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777850|ref|ZP_07416187.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu001]
 gi|306782581|ref|ZP_07420918.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu002]
 gi|306786399|ref|ZP_07424721.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu003]
 gi|306790768|ref|ZP_07429090.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu004]
 gi|306795298|ref|ZP_07433600.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu005]
 gi|306799486|ref|ZP_07437788.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu006]
 gi|306805332|ref|ZP_07442000.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu008]
 gi|306809518|ref|ZP_07446186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu007]
 gi|306969625|ref|ZP_07482286.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu009]
 gi|306973968|ref|ZP_07486629.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu010]
 gi|307081676|ref|ZP_07490846.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu011]
 gi|307086284|ref|ZP_07495397.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu012]
 gi|313660487|ref|ZP_07817367.1| hypothetical protein MtubKV_18785 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2924437|emb|CAA17737.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B
           [Mycobacterium tuberculosis H37Rv]
 gi|13883458|gb|AAK47963.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31620273|emb|CAD95716.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B
           [Mycobacterium bovis AF2122/97]
 gi|121495067|emb|CAL73553.1| Conserved hypothetical integral membrane protein yrbE4B
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599615|gb|EAY58719.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis C]
 gi|134152355|gb|EBA44400.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507516|gb|ABQ75325.1| conserved hypothetical integral membrane protein YrbE4b
           [Mycobacterium tuberculosis H37Ra]
 gi|148723234|gb|ABR07859.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis F11]
 gi|224775030|dbj|BAH27836.1| hypothetical integral membrane protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253322045|gb|ACT26648.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 1435]
 gi|289440398|gb|EFD22891.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 605]
 gi|289540665|gb|EFD45243.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85]
 gi|289687864|gb|EFD55352.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis
           02_1987]
 gi|289692808|gb|EFD60237.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           T92]
 gi|289696217|gb|EFD63646.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
 gi|289711186|gb|EFD75202.1| hypothetical integral membrane protein yrbE4B [Mycobacterium
           tuberculosis GM 1503]
 gi|289715223|gb|EFD79235.1| integral membrane protein [Mycobacterium tuberculosis T85]
 gi|298496774|gb|EFI32068.1| ABC-transporter integral membrane protein [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308213830|gb|EFO73229.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu001]
 gi|308324771|gb|EFP13622.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu002]
 gi|308329035|gb|EFP17886.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu003]
 gi|308332874|gb|EFP21725.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu004]
 gi|308336457|gb|EFP25308.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu005]
 gi|308340335|gb|EFP29186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu006]
 gi|308344190|gb|EFP33041.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu007]
 gi|308348120|gb|EFP36971.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu008]
 gi|308352884|gb|EFP41735.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu009]
 gi|308356697|gb|EFP45548.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu010]
 gi|308360651|gb|EFP49502.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu011]
 gi|308364268|gb|EFP53119.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           SUMu012]
 gi|323717842|gb|EGB27033.1| hypothetical protein TMMG_03674 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905342|gb|EGE52275.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           W-148]
 gi|328460273|gb|AEB05696.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis
           KZN 4207]
 gi|328864232|gb|AEB53199.1| conserved integral membrane protein YRBE4B [Mycobacterium
           tuberculosis]
          Length = 280

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 112/261 (42%), Gaps = 1/261 (0%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
            F+     + + +  F   +      +  V +    +   + +    +      +  +G 
Sbjct: 8   RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG- 66

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
             V V   ++  +G VIA QG   L   G E  +  L + L +R +  ++  + +A   G
Sbjct: 67  GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +   A++G+M+++EEIDA+  M +  V  L+S R+ A ++++  L  L+  +A   A   
Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
                     ++   F++    +++    ++A  M+ A+ +V    G+     S  +G  
Sbjct: 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246

Query: 346 VTTCVVQSISIVIIIDSLFAI 366
           V   V  S+ +V++I    ++
Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267


>gi|330994287|ref|ZP_08318215.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp.
           SXCC-1]
 gi|329758754|gb|EGG75270.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp.
           SXCC-1]
          Length = 300

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 91/248 (36%), Gaps = 5/248 (2%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
           +     + +       F      IG+     +  +          +  +    +     K
Sbjct: 25  QPEPENRGRLIALLGRFAPWLAAIGRLTRHQVRFTLLLIGAGWGTLRESLRPNSWRRPVK 84

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
               + +RQ+   G   + +    + + G ++  Q A+ L   G    +  ++  + +RE
Sbjct: 85  YEFRATLRQVVSGGFLSIVI---TATLAGLMVVSQAAYWLGYAGMAQMTGSILVSVLVRE 141

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           I  +L  +++ GRSG   + EIG M +  E+  ++  G+D    L+ PR +A  +    L
Sbjct: 142 ISPILVGIILMGRSGMLSLTEIGMMVLGGEVRGLQARGIDPFLALVMPRTFAFTLGGFTL 201

Query: 271 TILANFSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            ++    +++   +V      I      FF    +  T  +     +K   +   +G+ A
Sbjct: 202 GMIFAVVSLLMGFVVAHASGAITSSVWTFFFNVLAAMTTWDYLIIPLKFVLVGFFVGLGA 261

Query: 329 MKEGFAVG 336
              G  V 
Sbjct: 262 CISGLTVS 269


>gi|329114262|ref|ZP_08243024.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
 gi|326696338|gb|EGE48017.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001]
          Length = 298

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 94/245 (38%), Gaps = 5/245 (2%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
            ++  +R   +   +     IG+ + +              VI  +    A     +   
Sbjct: 26  AHKPAKRVPLHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 85

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           ++ +  +   GVS     +    +TG     Q  + L   G    +  ++  + +REI  
Sbjct: 86  VTTMNNIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 142

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +L  +++ GR+G     E+G + I  ++ +++++G+D   +L+ PR  A  ++   L IL
Sbjct: 143 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLLLVLPRTLAFTVAGFTLGIL 202

Query: 274 ANFSAIIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            + S++I   ++      I      F     +  ++ +     +K   +   +G+     
Sbjct: 203 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAIIPLKFIMVGFVVGLGGCLT 262

Query: 332 GFAVG 336
           G    
Sbjct: 263 GLTAT 267


>gi|258541977|ref|YP_003187410.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01]
 gi|256633055|dbj|BAH99030.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636112|dbj|BAI02081.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639167|dbj|BAI05129.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642221|dbj|BAI08176.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645276|dbj|BAI11224.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648331|dbj|BAI14272.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651384|dbj|BAI17318.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654375|dbj|BAI20302.1| ABC transporter permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 299

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 94/245 (38%), Gaps = 5/245 (2%)

Query: 94  KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153
            ++  +R   +   +     IG+ + +              VI  +    A     +   
Sbjct: 27  AHKPAKRIPVHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 86

Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213
           ++ +  +   GVS     +    +TG     Q  + L   G    +  ++  + +REI  
Sbjct: 87  ITTMNSIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 143

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           +L  +++ GR+G     E+G + I  ++ +++++G+D   +L+ PR  A  ++   L IL
Sbjct: 144 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLMLVLPRTLAFTVAGFTLGIL 203

Query: 274 ANFSAIIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            + S++I   ++      I      F     +  ++ +     +K   +   +G+     
Sbjct: 204 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAVIPLKFIMVGFVVGLGGCLT 263

Query: 332 GFAVG 336
           G    
Sbjct: 264 GLTAT 268


>gi|58040452|ref|YP_192416.1| ABC transporter permease [Gluconobacter oxydans 621H]
 gi|58002866|gb|AAW61760.1| Putative ABC transport system permease protein [Gluconobacter
           oxydans 621H]
          Length = 274

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 108/268 (40%), Gaps = 6/268 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
                +++  H+G      +  +         ++             +    + + Q   
Sbjct: 9   RITMVRSMLVHLGYFSRTQMRFTLMMIGAGWGIMREATRLTTWRRTVRIEFWASLHQAVG 68

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G+      ++ + +TG  I  Q  + L   G    +  ++S + +REI  +L  V++ G
Sbjct: 69  GGILS---TLVTAALTGFGIVAQTVYWLGFAGMAQMTGSILSTVLVREIAPVLVGVILLG 125

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RSG  ++ E+G++    ++ A+  MG+D     + PR  A+ IS   L ++ + +A++  
Sbjct: 126 RSGMLMLTELGTLTTGGQMRAMTGMGIDPFISFLLPRSLAMTISGFTLGVIFSMTALLVG 185

Query: 283 SIVIWK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
             V        +P   F  +  S+    + F    K  F   A+G+ +   G  V    +
Sbjct: 186 YAVCRVEDAITMPIWAFLDQVVSSVKPIDYFVIPAKFIFSGYAVGVCSCLSGMDVT-TED 244

Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368
            L   +     + +  +++I+ +F++ +
Sbjct: 245 DLSSMLPRGFARGMLSIMVINVVFSVCF 272


>gi|218463600|ref|ZP_03503691.1| probable ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 191

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 5/180 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S       R +GNW+S  +  +  D    +++  +S    VDLS IT+IDT G  L+   
Sbjct: 17  STGSGQRVRLSGNWRSAYVHLVLRDFEKLLHQ--KSGDLTVDLSDITDIDTAGIWLLCRL 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
            ++     +          +  +++    ++    +P+     +    +   IGK     
Sbjct: 75  KKEAEAAGRTVRFEGTNPHIDEMLAM-FSEEPAKPEPEPREKISLAARILAPIGKMTYDV 133

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181
            ++  +  +ILG  +                  S++ Q+ ++GV  VP+++L+SF+ GA+
Sbjct: 134 WDNLAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 191


>gi|207110315|ref|ZP_03244477.1| hypothetical protein HpylH_14585 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 113

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 59/111 (53%)

Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313
            L+ PR+ AL+I LPLL  +A+  AI+G    I    D+ F  +  R H T    +   G
Sbjct: 1   FLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVG 60

Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364
           ++KAPF   AI +V    GF V   + S+G+  T  VV ++  +I +D+ F
Sbjct: 61  IVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDACF 111


>gi|3123858|gb|AAC15953.1| hypothetical integral membrane protein [Campylobacter jejuni]
          Length = 133

 Score = 98.5 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 47/97 (48%)

Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334
           +  +I+G  +V     DI F  F  RF     + +I  GL KAP     IG++A   GF 
Sbjct: 2   DAISILGGMVVAKINLDISFGEFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFE 61

Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371
           V   + S+G   T  VV +I  VI  D+LF++    +
Sbjct: 62  VKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTIM 98


>gi|68171321|ref|ZP_00544719.1| ABC transporter permease protein [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999248|gb|EAM85900.1| ABC transporter permease protein [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 105

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 40/105 (38%)

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324
           +++P++ + A+     G  IV          ++           ++  GL+KA      I
Sbjct: 1   VAMPIVILCADLIGAYGGYIVGSYQLGYTSEMYIKGVIKFLHAKDVTLGLVKATVFGFII 60

Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369
             +    G+     +  +G   T  VV S   +I+ + +  +FY 
Sbjct: 61  SFMGCYSGYYCSGGARGVGLATTYVVVVSSMFIILFNYIITVFYS 105


>gi|291287596|ref|YP_003504412.1| hypothetical protein Dacet_1692 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884756|gb|ADD68456.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 258

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 97/239 (40%), Gaps = 3/239 (1%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            K + + +G+  +                I         +   K       RQ+Y+ GV 
Sbjct: 1   MKQIIHRLGRWAIDNSVFYYGYLGFTRKFIKGCFNRHLLNPSVKLVF---FRQIYFTGVQ 57

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +P+  ++S V G  +       + QFGA+    D++ ++ ++ +  ++ A+++  RS +
Sbjct: 58  ILPMFSVVSIVIGLALVGGLTKFMVQFGAQDRVGDVLVLVTIKHLAPMVAAILLVLRSST 117

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
           A+ AEI  MK+N EID +R++ ++    L  PRI + I+    L  +  + +++G  +++
Sbjct: 118 AVTAEIALMKMNNEIDTLRSLSINPFIYLYIPRIASGIVCTGALATIFVYISLLGGYMIL 177

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345
               +I F               +   L+K   +   +  + +     V      +   
Sbjct: 178 SFNLNISFGFLMQTIFDAFNFKIVLVFLMKIVLLGYFLMSLPIFSALQVHNSVTEIPIA 236


>gi|213027514|ref|ZP_03341961.1| toluene ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 152

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 76/148 (51%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236
             G V+  QG   L+ + AE     L+++  LRE+G ++ A++ AGR+GSA+ AEIG M+
Sbjct: 65  FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124

Query: 237 INEEIDAIRTMGLDFVRILISPRIWALI 264
             E++ ++  M +D +R +ISPR WA +
Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGV 152


>gi|296115253|ref|ZP_06833894.1| putative ABC transport system permease protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295978354|gb|EFG85091.1| putative ABC transport system permease protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 302

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 91/239 (38%), Gaps = 5/239 (2%)

Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161
            F          IG+ +   +  +          +  +    A          S +RQ+ 
Sbjct: 38  RFLLRVAPWLAAIGRFVRHQVRFTLMLVGAGWGTLRESLRPNAWRRPVIFEFRSCLRQVI 97

Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G+      ++ + + G ++  Q A+ L   G    +  ++  + +REI  +L  +++ 
Sbjct: 98  AGGLIS---TVVTATLAGLMVVSQAAYWLGFAGMAQMTGSILVSVLVREITPILMGIILL 154

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
           GRSG   + +IG M +N ++  ++  GLD    L+ PR +A ++    L I+    +++ 
Sbjct: 155 GRSGMLSLTQIGLMVLNGQVRTMQARGLDPFLTLVMPRAFAFMVGGFSLGIIFAVVSLLM 214

Query: 282 ASIVIWKYY--DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338
              V       +     FF    +  T  +     +K   +   +G+ A   G  V  +
Sbjct: 215 GFFVAHATGAINSSVWTFFFNVLAAMTTWDYLIIPLKFLLVGFFVGLGACISGLTVSNN 273


>gi|209545500|ref|YP_002277729.1| hypothetical protein Gdia_3388 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533177|gb|ACI53114.1| protein of unknown function DUF140 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 296

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 92/247 (37%), Gaps = 5/247 (2%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
             +       +            IG+     +  +     +   V+  +    +     +
Sbjct: 21  PPVGALPHWLAAAAARVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVR 80

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                 +RQ+   GV      +  + + G  +  Q A+ L   G    +  ++  + +RE
Sbjct: 81  DEFRLCLRQVVGGGVLS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVRE 137

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           I  +L  +++ GRSG   + EIG + +  ++ A++  GLD   +L+ PR +A  +    L
Sbjct: 138 IAPVLVGIILLGRSGMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTL 197

Query: 271 TILANFSAIIGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            IL    A++   IV        +    FFS   +  +  +     +K   +   +G+ A
Sbjct: 198 GILFATMALLMGFIVTHTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGA 257

Query: 329 MKEGFAV 335
              G  V
Sbjct: 258 CITGLLV 264


>gi|162148733|ref|YP_001603194.1| putative ABC transport system permease [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787310|emb|CAP56904.1| putative ABC transport system permease protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 296

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 92/247 (37%), Gaps = 5/247 (2%)

Query: 91  KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150
             +       +            IG+     +  +     +   V+  +    +     +
Sbjct: 21  PPVGALPHWLAAAAARVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVR 80

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                 +RQ+   GV      +  + + G  +  Q A+ L   G    +  ++  + +RE
Sbjct: 81  DEFRLCLRQVVGGGVLS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVRE 137

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           I  +L  +++ GRSG   + EIG + +  ++ A++  GLD   +L+ PR +A  +    L
Sbjct: 138 IAPVLVGIILLGRSGMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTL 197

Query: 271 TILANFSAIIGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            IL    A++   IV        +    FFS   +  +  +     +K   +   +G+ A
Sbjct: 198 GILFATMALLMGFIVTHTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGA 257

Query: 329 MKEGFAV 335
              G  V
Sbjct: 258 CITGLLV 264


>gi|313673540|ref|YP_004051651.1| hypothetical protein Calni_1580 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940296|gb|ADR19488.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 258

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 11/236 (4%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG----FLLSLIRQMYYVGVSGVPVV 171
           + I            +L   +    +  +    FK       +  +RQ+Y+ GV  + VV
Sbjct: 3   RTIYHLGKFFVDGFRVLKDYLLFCNKVLSRFLTFKILNPAIFMVTLRQVYFTGVQIIRVV 62

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
           ++I+ + G  +       L   GA      +  ++ +RE+   LTA++++ RS +A+ AE
Sbjct: 63  VIIAIIFGLGLVGTLGKFLMNIGAYQKIGTIFVVVVIREVAPFLTALLLSLRSATAVGAE 122

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
           I  MK+  EI +I+  G+D    L  PRI+A ++    L ++ +  +I     ++    +
Sbjct: 123 ISMMKLGSEIRSIKIHGIDEYSYLFLPRIFAGMVCSFSLAVIFSAVSITIGYFLLSFQLN 182

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
           I F    S       + +IF  + K       +  + +         S  +GK  T
Sbjct: 183 ITFDYMVSLIFDALNINDIFCFIYKTILFGFTLMTLPIF-------TSMGVGKATT 231


>gi|237757027|ref|ZP_04585479.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690807|gb|EEP59963.1| ABC-type transport system involved in resistance to organic
           solvents, permease component [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 137

 Score = 96.2 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 1/131 (0%)

Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186
           S     G +         S  KF   +  +++ M  +GV+  P+++L  F TG V+  + 
Sbjct: 6   SLIEHTGNITIFFLRTLLSFKKFP-KIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVET 64

Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
                +F AE     L+S+   RE+  +L A+++  RSGSAI A IG+M+I E+IDA+  
Sbjct: 65  YPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEV 124

Query: 247 MGLDFVRILIS 257
           M +D +R L+ 
Sbjct: 125 MAVDPMRYLVL 135


>gi|74316998|ref|YP_314738.1| ABC-type transport system permease [Thiobacillus denitrificans ATCC
           25259]
 gi|74056493|gb|AAZ96933.1| ABC-type transport system ipermease component [Thiobacillus
           denitrificans ATCC 25259]
          Length = 264

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 104/260 (40%), Gaps = 3/260 (1%)

Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163
            NS       +G K+V +     +    LG       E    +   +     +++Q+Y+ 
Sbjct: 1   MNSIAASLESLGAKVVGWFTVGYAMFSFLGKAGLLLLERETWN---RATFDVVVKQVYFT 57

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
            V  + V +  + V   +I          FG   F+ ++   + + E+   LTA+ +A R
Sbjct: 58  AVQILHVFLGYALVISWLIITIILSTARDFGLTAFASEMTIRVLVLELLPFLTALFVALR 117

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           SGSAI  E+  M++N E+DA+    +  ++    PR+   ++S+  L  LA   A++   
Sbjct: 118 SGSAINTEVALMQVNNELDALAHCKVPPMQFEFLPRLIGGVVSVVTLAGLAGLLALLLGY 177

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343
           + I+      F  +            +   ++K+     A+ ++ +  G         + 
Sbjct: 178 LAIYGAGTAGFEPYTQTIAKIFDFGILAGLVVKSALFGLAVTLIPVTAGLETPKKLFMVP 237

Query: 344 KKVTTCVVQSISIVIIIDSL 363
             V   +++    ++ I+ +
Sbjct: 238 VSVLRGMMRVFFAIVAIEVV 257


>gi|270595146|ref|ZP_06221505.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
 gi|270318343|gb|EFA29500.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
          Length = 133

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 78/133 (58%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                     + +     L++QM+ +GV  + +++L     G V+  QG   L  F AE 
Sbjct: 1   MLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAET 60

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
               L+++  LRE+G ++TA++ AGR+GSA+ AEIG MK  E++ ++  M +D +R +I+
Sbjct: 61  SJGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIA 120

Query: 258 PRIWALIISLPLL 270
           PR WA +IS+P+L
Sbjct: 121 PRFWAGVISMPIL 133


>gi|114328087|ref|YP_745244.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1]
 gi|114316261|gb|ABI62321.1| ABC transporter permease protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 273

 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 5/239 (2%)

Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159
            +  +   +     IG+     +            V+   G         +      + Q
Sbjct: 7   PAQSFARVRLFLRVIGRGTRNMLRFLLIMVAASAGVVLEVGRPSCWRRTTRAAFGQTLHQ 66

Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219
               GV      +  + + G  +  Q  + L   G    +  +++ + LRE+  +L  ++
Sbjct: 67  AAGGGVIS---TLFTATLVGIAMISQAIYWLGFAGMVESTGTILATILLRELSPILVGII 123

Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279
           + GRSG  +++E+G +  N  I  +   G+D   ++I PR  A  +S   L ++   +A+
Sbjct: 124 LLGRSGMPMISELGMLSANGHIRTLEAQGIDPFILIIVPRTIAFTVSAFTLGMVFAVTAL 183

Query: 280 IGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336
                              F +    + +  +     +K   +   +G+ +   G +  
Sbjct: 184 CVGFAAATEEGLITQSLWGFLTSVTGSMSELDYIIIPLKLMVVGFLVGLSSCLTGLSAQ 242


>gi|148823178|ref|YP_001287932.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11]
 gi|148721705|gb|ABR06330.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis F11]
          Length = 141

 Score = 93.1 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 59/134 (44%)

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
              I EE+DA+R MG++ ++ L +PR+ A       L  +   + +IGA         + 
Sbjct: 1   MRTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVS 60

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353
              + +   +     ++   +IKA       G++A  +G +VG     +G+ V   VV +
Sbjct: 61  AGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFA 120

Query: 354 ISIVIIIDSLFAIF 367
             ++ +I+ +    
Sbjct: 121 FIVLFVINIVVTAV 134


>gi|167947559|ref|ZP_02534633.1| hypothetical protein Epers_13847 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 132

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 50/127 (39%), Positives = 82/127 (64%)

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
           QL  FGA+I+  +L+ +  +RE+G ++TA+++AGR+GSA  A++GSM++NEE+DA+RT G
Sbjct: 6   QLQMFGAQIYVANLVGLGMVREMGAMMTAIIMAGRTGSAYAAQLGSMQVNEEVDALRTFG 65

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           +  +  L+ PR  +LI+ LPLL I ++   I+G  IV     DI    +  +      L 
Sbjct: 66  ISPMEYLVLPRSLSLILMLPLLCIWSDVLGIVGGLIVAAALLDISLLHYLQQTQEAINLM 125

Query: 309 NIFTGLI 315
           ++ TG+I
Sbjct: 126 DVLTGMI 132


>gi|315635511|ref|ZP_07890777.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
 gi|315480269|gb|EFU70936.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Arcobacter butzleri JV22]
          Length = 91

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 51/91 (56%)

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
            I+     D+ F  F +R H+   L ++  G+ KA F   AI I+    GF V  ++ S+
Sbjct: 1   MIIASSSLDVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSI 60

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373
           GK  T  VV +I +VI+ID++F++ +  +GI
Sbjct: 61  GKFTTMSVVNAIFVVILIDAVFSVIFTQMGI 91


>gi|207109506|ref|ZP_03243668.1| hypothetical protein HpylH_09844 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 137

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 2/139 (1%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +GK IV+  N   +  +  G+++    +   +  +F   +  L+  +   G   +P
Sbjct: 1   MITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLP 58

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           V IL  F+ G  +A QGA QL   GA + S+++ + L LREIG  +  +++AGRS S+  
Sbjct: 59  VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 118

Query: 230 AEIGSMKINEEIDAIRTMG 248
           A+IG MKI EE+DA++TMG
Sbjct: 119 AQIGVMKITEELDAMKTMG 137


>gi|251771004|gb|EES51588.1| probable ABC transporter, permease protein [Leptospirillum
           ferrodiazotrophum]
          Length = 211

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 99/205 (48%)

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
            G+S +P++ +++ + GA +  +   +L + G +     ++  +    +G   TA+++  
Sbjct: 3   AGLSALPIITVVALLVGAGVVAETGIELPKLGIQNLVGTIVLHVIFGIVGPFATALIVIA 62

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           RS S +  EIG+M+++ E+D I  +G++   ++I+P I  +I+S   LT      A+ G 
Sbjct: 63  RSTSGLAVEIGNMRVSGELDTIEMLGVNLSYLIITPNIIGIIVSTIALTFYFGIIAMAGG 122

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342
             +      +P A           L+++   L++  F    I  V++  G  V   +  +
Sbjct: 123 FAMALMGLSMPVATLVRMIEMNIRLSDLLLPLLEGLFYGLIISSVSVYHGLRVKRSAREV 182

Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367
            K+    +V ++++  +  SL+ IF
Sbjct: 183 PKETRLALVSALALSTVALSLYLIF 207


>gi|324999497|ref|ZP_08120609.1| hypothetical protein PseP1_12051 [Pseudonocardia sp. P1]
          Length = 263

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 100/244 (40%), Gaps = 4/244 (1%)

Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192
           G+       F ++     G+  + +   Y         +    F      +       +Q
Sbjct: 17  GMAALLVTVFGSAIRNPVGYWRAAMLDFYTTVRRAALPMAAAIFGFLLFFSLVVVIFFNQ 76

Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252
            GA      L+ +   R   V + AV+++G +G+A+ A++G+ KI +E+DA+R MGLD V
Sbjct: 77  VGAVSLGSALLFLYGFRAFTVFVVAVVVSGVAGAALTADLGARKIRDELDAMRVMGLDPV 136

Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312
           R L+ PR+ ++++   L+ +     + +   I    Y  +    ++    +      + +
Sbjct: 137 RELVVPRVVSMVVLTTLIVLPGLGVSAVALQIGASYYGHLAAVDYYDNLFAALVPLELGS 196

Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII----DSLFAIFY 368
            ++    +   I IV   +G      S  +G+ V   VV     + +     +++F   +
Sbjct: 197 VVLNCFLLGIMIAIVCCYKGLNASGGSIGVGRAVNQAVVICYVGLFVFQLAYNAVFLGLF 256

Query: 369 FAIG 372
             +G
Sbjct: 257 PEVG 260


>gi|167951062|ref|ZP_02538136.1| ABC-type toluene export protein [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 189

 Score = 82.7 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 64/121 (52%)

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197
                  S ++    L  +IRQ++++G   + V+++    TG V+A Q    L +FG+  
Sbjct: 4   MLLSALLSLFRAPYQLEPVIRQLHFIGARSMLVIVISGLFTGMVLALQFHNTLERFGSVD 63

Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257
                +++  LRE+G ++ A+M+ GR+GSA+ AEIG M+ +E+I      G    ++   
Sbjct: 64  LLGSAVALALLRELGPVMAALMVVGRAGSAMCAEIGIMRTSEQIRCAGVHGDRSPQVHYC 123

Query: 258 P 258
           P
Sbjct: 124 P 124


>gi|121594930|ref|YP_986826.1| ABC-type transport system permease [Acidovorax sp. JS42]
 gi|222110419|ref|YP_002552683.1| hypothetical protein Dtpsy_1216 [Acidovorax ebreus TPSY]
 gi|120607010|gb|ABM42750.1| ABC-type transport system ipermease component [Acidovorax sp. JS42]
 gi|221729863|gb|ACM32683.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY]
          Length = 269

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 90/234 (38%), Gaps = 7/234 (2%)

Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166
            + L     +  V +          LG V+       +S  +   +   L R MY     
Sbjct: 11  PRRLWAQARRWAVAWWR-----IIYLGAVVMVLMLSPSSYGRATRWR--LARHMYQDTAP 63

Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226
            +    +++ +   VI +        +G   ++++++  + + E+  L  A+ +A R+  
Sbjct: 64  ILLGFTVLAALISLVITRIVVVTALSYGLSRYALEMVIRVLVLELIPLTAALFVAMRATI 123

Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286
               ++  M+ +  + A+R  G D VR+ + PR+ A + +   L  L+   A++ A + +
Sbjct: 124 PNGTQLALMRQSGHLQALRQRGADPVRMELLPRVVAGVYASITLAALSCVVALVMAYLGV 183

Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340
           +        V+   F            ++K  F + A+ ++ M  G      + 
Sbjct: 184 YGLNTAGLPVYTRMFGHVFAPQITLVFVLKTVFFSLAVALIPMASGLYESGDAR 237


>gi|196229086|ref|ZP_03127952.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Chthoniobacter
           flavus Ellin428]
 gi|196227367|gb|EDY21871.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Chthoniobacter
           flavus Ellin428]
          Length = 261

 Score = 80.4 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 102/242 (42%), Gaps = 4/242 (1%)

Query: 130 HILGLVISNTGEFCASSYKFKGFL--LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187
            +LG + S            +  +     +RQ+           ++ +F+ G   A    
Sbjct: 13  SLLGAIFSVGARCLPRVLLGRATIVERETVRQILSFQSGTAFASVMTAFIYGLAAAYAVL 72

Query: 188 FQLSQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246
              +   A E   +  +    L  +     A ++  +    + ++I SM+ ++E+DA+  
Sbjct: 73  SNTASPAAFETLVLPQLGGAFLHYVVPFAIANLVVLKGVVGMTSDITSMRASQEVDALEA 132

Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306
           +GL    ++ +PR  ALI++ P L +L  +SA +GA +V+W      F  F + F S+ T
Sbjct: 133 VGLHPAEMIFAPRALALIVTAPALAVLGVYSACLGAWLVVWLTAGTGFVAFVAAFASSVT 192

Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS-LGKKVTTCVVQSISIVIIIDSLFA 365
              +   + K    A A+ +++   GF         +G   T+ V  ++   I+++ L +
Sbjct: 193 SIGMLFAVGKLAITALAMSLISGYFGFVGARAEQGFVGHITTSAVAMAVFSTIVVNLLLS 252

Query: 366 IF 367
           + 
Sbjct: 253 LL 254


>gi|307608999|emb|CBW98412.1| hypothetical protein LPW_02641 [Legionella pneumophila 130b]
          Length = 251

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 16/256 (6%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I+ F++        LG ++ +T +      K      + +  +YY G   V ++  I 
Sbjct: 9   KPIITFLHSLELAFRFLGHLVHSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + GA ++Q     L  F      + ++  +   EI  +L   ++  ++   +V      
Sbjct: 67  ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120

Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
                   +     +    +   + P I  + I+  LL +   F+      +        
Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTFHFMLGF 175

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V+  + +
Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235

Query: 353 SISIVIIIDSLFAIFY 368
               +II      + +
Sbjct: 236 GSFWLIIASMYITLTF 251


>gi|54293187|ref|YP_125602.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens]
 gi|53753019|emb|CAH14462.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens]
          Length = 251

 Score = 80.0 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 16/256 (6%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I+ F++        LG ++ +T +      K      + +  +YY G   V ++  I 
Sbjct: 9   KPIITFLHSIELAFRFLGHLVHSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + GA ++Q     L  F      + ++  +   EI  +L   ++  ++   +V      
Sbjct: 67  ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120

Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
                   +     +    +   + P I  + I+  LL +   F+      +        
Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTFHFMLGF 175

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V+  + +
Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235

Query: 353 SISIVIIIDSLFAIFY 368
               +II      + +
Sbjct: 236 GSFWLIIASMYITLTF 251


>gi|54296206|ref|YP_122575.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris]
 gi|148358387|ref|YP_001249594.1| putative ABC transport system permease [Legionella pneumophila str.
           Corby]
 gi|296105737|ref|YP_003617437.1| probable ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|53749991|emb|CAH11379.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris]
 gi|148280160|gb|ABQ54248.1| probable ABC transport system permease protein [Legionella
           pneumophila str. Corby]
 gi|295647638|gb|ADG23485.1| probable ABC transport system permease protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 251

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 89/256 (34%), Gaps = 16/256 (6%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I+ F++        LG ++ +T +      K      + +  +YY G   V ++  I 
Sbjct: 9   KHIITFLHSLELAFRFLGHLVDSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + GA ++Q     L  F      + ++  +   EI  +L   ++  ++   +V      
Sbjct: 67  ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120

Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
                   +     +    +   + P I  + I+  LL +    +      +        
Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTFHFMLGF 175

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V+  + +
Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235

Query: 353 SISIVIIIDSLFAIFY 368
               +II      + +
Sbjct: 236 GSFWLIIASMYITLTF 251


>gi|52840425|ref|YP_094224.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627536|gb|AAU26277.1| probable ABC transport system permease protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 251

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 89/256 (34%), Gaps = 16/256 (6%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K I+ F++        LG ++ +T +      K      + +  +YY G   V ++  I 
Sbjct: 9   KPIITFLHSLELAFRFLGHLVHSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            + GA ++Q     L  F      + ++  +   EI  +L   ++  ++   +V      
Sbjct: 67  ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120

Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
                   +     +    +   + P I  + I+  LL +    +      +        
Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTFHFMLGF 175

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352
               F S   S+ TL ++   ++K   +   +G+ +    +   +    L K V+  + +
Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235

Query: 353 SISIVIIIDSLFAIFY 368
               +II      + +
Sbjct: 236 GSFWLIIASMYITLTF 251


>gi|41406205|ref|NP_959041.1| hypothetical protein MAP0107 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394553|gb|AAS02424.1| hypothetical protein MAP_0107 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 119

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 38/112 (33%)

Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320
            A +I++  L I       +   +V           +   F    +  +I   ++K    
Sbjct: 1   MASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYLHYFTMMLSAKDIAYSVLKCVVF 60

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372
                 V    GF        +G      +  SI++VI+++ L  +  ++I 
Sbjct: 61  VWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVIMVNMLLTMALWSID 112


>gi|320102563|ref|YP_004178154.1| hypothetical protein Isop_1016 [Isosphaera pallida ATCC 43644]
 gi|319749845|gb|ADV61605.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644]
          Length = 290

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 96/251 (38%), Gaps = 17/251 (6%)

Query: 86  SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145
             ++  + +   P++   ++  +     IG+  +  I+   +   +    +  T      
Sbjct: 8   KRSNPSQPRRSLPRKGRGFDPLRRSLAAIGRGTLATISYLGALKLLTLATLRATIRPPRD 67

Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205
           +   +    ++  Q+ ++   G+P+ +L+    G  +A Q  +  +   A   +  ++  
Sbjct: 68  APPLR---RAVSAQLAWMLSMGLPLTVLVHVSLGGFLAMQSYYGATFILA---TGPVVLT 121

Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265
             +R +  ++  +++ G  G+   AE+          A +   +     L + R WA +I
Sbjct: 122 GLIRNLSPVMAGLILVGMVGTRCTAEL----------ARQGFRISP-AYLTAARFWAAVI 170

Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325
           + P+L +    +  +  + V +++  +    +F          ++   L+K      A  
Sbjct: 171 AGPILGLAGTLTGSLAGAAVAYRWLGVSVQGYFEFGWEMVWFRDVVGLLVKGMLFGGATV 230

Query: 326 IVAMKEGFAVG 336
           ++A  EG  + 
Sbjct: 231 LIAALEGLRIT 241


>gi|120610497|ref|YP_970175.1| ABC-type transport system permease [Acidovorax citrulli AAC00-1]
 gi|120588961|gb|ABM32401.1| ABC-type transport system ipermease component [Acidovorax citrulli
           AAC00-1]
          Length = 266

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 81/213 (38%), Gaps = 2/213 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG V++      +S  +F      L R MY      +     +  +   V+      
Sbjct: 29  IVHLGAVVAVLMLSPSSYGRF--TRARLARHMYLDTAPLLLGFTALVALICLVVTHIVVI 86

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
               +G   +++ ++  + + E+  L  A+ +A R+      ++  M+ +   DA+R  G
Sbjct: 87  TARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMRQSGHWDALRARG 146

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
            D VR+ + PR+ A + +   L  L+   A++ A + ++         +   F    T  
Sbjct: 147 ADPVRVELLPRVVAGMYASITLAALSCVVALVMAYLGVYGASTAGVPAYTRMFGQVFTPP 206

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
                ++K    + A+ ++ M  G        +
Sbjct: 207 LTLLFVLKTLLFSLAVALIPMAAGLHATGDPRA 239


>gi|296161924|ref|ZP_06844724.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1]
 gi|295887800|gb|EFG67618.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1]
          Length = 218

 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    GNW  P    +     +++ +  Q     +D S +   DT GA L+   +     
Sbjct: 40  VLAIIGNWTLPHYDTLR---ALSVERVTQDAITSLDFSRLGGHDTAGAALLAQVLGPERL 96

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127
           +  L   +       +L+        K      +   N    L   IG  +++  + + +
Sbjct: 97  QSLLHDATGLDHDRLALLDAVVLAVGKVAGQPVTRRRNGVIELLERIGAAVLRLAHRTVA 156

Query: 128 QAHILGLVI-SNTGEFCASSYKFKGFLLSLIRQMYYVG 164
               +GLV+ S     C    + +     L R+  + G
Sbjct: 157 LLGFIGLVLESLMLAACRPKARPRRTEHLLQRESCFSG 194


>gi|264677704|ref|YP_003277610.1| ABC transporter permease [Comamonas testosteroni CNB-2]
 gi|262208216|gb|ACY32314.1| ABC-type transport system ipermease component [Comamonas
           testosteroni CNB-2]
          Length = 267

 Score = 75.0 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 85/221 (38%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+        + +    + L         + S   K     L +QM+      +     +
Sbjct: 12  GRIWAALGAQALAWWRSIYLTAVLLVLVSSPSSYRKRGRAMLAQQMFAQTAPILTGFTAL 71

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + +  AVIA+        +G   +++DL+  + + E+  L  A+ +A R       ++  
Sbjct: 72  AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++  ++   +T G+D VR  + PR  A + +   L  L+   A++   + ++ +    F
Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAITLAALSCIVALVTVYLSVYGFSLAGF 191

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
             +   F    T +     ++K  F +  + ++ +      
Sbjct: 192 GAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYT 232


>gi|213023205|ref|ZP_03337652.1| hypothetical protein Salmonelentericaenterica_11695 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 105

 Score = 75.0 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)

Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326
           PLLTI+     I G S+V   +  I    F+S   +      ++   LIK+   A  +  
Sbjct: 1   PLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTW 60

Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370
           +A+  G+     S  + +  T  VV +   V+ +D +     F 
Sbjct: 61  IALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 104


>gi|32472426|ref|NP_865420.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica
           SH 1]
 gi|32443662|emb|CAD73104.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica
           SH 1]
          Length = 527

 Score = 75.0 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 91/271 (33%), Gaps = 26/271 (9%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISF 176
               +       G  +         +     + K     L   +  VG     V ++I+ 
Sbjct: 257 LRRGAERFLDSTGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVGGPSAWVYLIIAG 316

Query: 177 VTGAVIAQQGAFQLS--------QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228
           +          F L         Q       +  +     R +  +L  V+IA R G+A+
Sbjct: 317 LIAGFTT--TYFTLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAARCGAAV 374

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G  +   ++DA RT+G+     L+ P + A +I+ P+L  +A  ++   + +    
Sbjct: 375 AADVGVKQYGGQVDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWISRVTFNF 434

Query: 289 YYDIPFAVFFSR-FHSTATLANIFTGLI-----------KAPFMACAIGIVAMKEGFAVG 336
            +      F+ + F    T       +I           K          +   +G    
Sbjct: 435 SHPEIGVHFWQQHFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYHQGITPK 494

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +  +   +T  V+ +   V+++  + A+ 
Sbjct: 495 HSAGDVSHCITATVLWTTLYVLVVHFVVALL 525


>gi|327538488|gb|EGF25152.1| membrane protein containing ABC transporter-like domain
           [Rhodopirellula baltica WH47]
          Length = 527

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 93/271 (34%), Gaps = 26/271 (9%)

Query: 121 FINDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISF 176
               +       G  +         +     + K     L   +  VG     V ++I+ 
Sbjct: 257 LRRGAERFLDSTGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVGGPSAWVYLIIAG 316

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDL--------MSILQLREIGVLLTAVMIAGRSGSAI 228
           +          F L      +++  L        +     R +  +L  V+IA R G+A+
Sbjct: 317 LIAGFTT--TYFTLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAARCGAAV 374

Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288
            A++G  +   ++DA RT+G+     L+ P + A +I+ P+L  +A  ++   + +    
Sbjct: 375 AADVGVKQYGGQVDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWISRVTFNF 434

Query: 289 YYDIPFAVFFSR-FHSTATLANIFTGLI-----------KAPFMACAIGIVAMKEGFAVG 336
            +      F+ + F    T       +I           K          +   +G    
Sbjct: 435 SHPEIGVHFWQQHFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYHQGITPK 494

Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
             +  +   +T  V+ +   V+++  + A+ 
Sbjct: 495 HSAGDVSHCITATVLWTTLYVLVVHFVVALL 525


>gi|299530299|ref|ZP_07043724.1| ABC-type transport system ipermease component [Comamonas
           testosteroni S44]
 gi|298721670|gb|EFI62602.1| ABC-type transport system ipermease component [Comamonas
           testosteroni S44]
          Length = 267

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 86/221 (38%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+        + +    + L         + S   K     L +QM+      +     +
Sbjct: 12  GRIWAALGAQALAWWRSIYLTAVLLVLVMSPSSYQKHGRAMLAQQMFAQTAPILTGFTAL 71

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + +  AVIA+        +G   +++DL+  + + E+  L  A+ +A R       ++  
Sbjct: 72  AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M++  ++   +T G+D VR  + PR  A + +   L  L+   A++   + ++ +    F
Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335
           A +   F    T +     ++K  F +  + ++ +      
Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYT 232


>gi|221068184|ref|ZP_03544289.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
 gi|220713207|gb|EED68575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1]
          Length = 267

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 84/213 (39%)

Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174
           G+        + +    + L         + S   K     L +QMY      +     +
Sbjct: 12  GRIWAALGAQALAWWRSIYLTAMLLVLISSPSSYQKHGRAMLAQQMYAQTAPILTGFTAL 71

Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
           + +  AVIA+        +G   +++DL+  + + E+  L  A+ +A R       ++  
Sbjct: 72  AALLCAVIARIVIVTAQSYGLSRYAMDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131

Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294
           M+   ++   +T G+D VR  + PR  A + +   L  L+   A++   + ++ +    F
Sbjct: 132 MRTQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191

Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           A +   F    T +     ++K  F +  + ++
Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVM 224


>gi|326316567|ref|YP_004234239.1| hypothetical protein Acav_1754 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373403|gb|ADX45672.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 266

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 4/229 (1%)

Query: 117 KIVKFINDSCSQAHILGLVISN----TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172
              +    +   A     ++           + S   +     L R MY      +    
Sbjct: 11  WTDRLWRAARGWALAWWRIVYLGAVVAVLMLSPSSYGRSTRARLARHMYIDTAPLLLGFT 70

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            +  +   V+          +G   +++ ++  + + E+  L  A+ +A R+      ++
Sbjct: 71  ALVALICLVVTHIVVVTARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQL 130

Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292
             M+ +   DA+R  G D VR+ + PR+ A I +   L  L+   A++ A + ++     
Sbjct: 131 ALMRRSGHWDALRARGADPVRVELLPRVVAGIYASITLAALSCVVALVMAYLGVYGASTA 190

Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341
               +   F    T        +K    + A+ ++ M  G        +
Sbjct: 191 GVPAYTRMFGQVFTPPVTLLFALKTLLFSLAVALIPMAAGLHATGDPRA 239


>gi|149918279|ref|ZP_01906770.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis
           pacifica SIR-1]
 gi|149820805|gb|EDM80214.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis
           pacifica SIR-1]
          Length = 561

 Score = 73.1 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 22/295 (7%)

Query: 78  IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137
              +   ++    +++  +K   +            +  K    ++       +   V++
Sbjct: 257 AAHVGDQMAERLGRELTPEKSDDARSKGLLARAAGSLASKASGALDAILGGLEVGPRVLA 316

Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ---FG 194
             G        F      ++RQ             ++S + G  +       L       
Sbjct: 317 QLGRALLRPRDFAEVFGPVLRQAL---WRPAAFFAVVSTLIGFTLLYILHRSLGGGELPL 373

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  L+  + +  +   L+ ++ A  S +AIVA +G M +  +  A+R +G+   R 
Sbjct: 374 RPDRVFSLIGSMHVIALAPPLSGILFAATSANAIVAWLGGMSLTRQTTALRALGIGESRY 433

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF-SRFHSTATLANI--- 310
           L  P    L+ +   L  L     + G  + +              +       A+I   
Sbjct: 434 LWVPAWLGLVGAYLALAALFTLGMLGGGVLYVVFAVPEIGDPSTRWQLAWELLTADIVDP 493

Query: 311 --------FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357
                      L      A  I   A+ +G      +  +    T  +V+S+ +V
Sbjct: 494 PPERAVFRVRALGLGLAYALGIASDAVAKGARDKHSAQDV----TVAMVRSVMVV 544


>gi|121607549|ref|YP_995356.1| ABC-type transport system permease [Verminephrobacter eiseniae
           EF01-2]
 gi|121552189|gb|ABM56338.1| ABC-type transport system ipermease component [Verminephrobacter
           eiseniae EF01-2]
          Length = 287

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 85/206 (41%), Gaps = 2/206 (0%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
              LG V+       +S    +    +L R++Y      +P   +++ +   V+ +    
Sbjct: 52  IFYLGAVVLVLALSPSSYGPGRRQ--ALARRLYLDTAPVLPGFTVLAALISLVLTRIVVV 109

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248
               +G   ++++++  + + E+  L  A+ +A R      A++  ++ + ++DA+   G
Sbjct: 110 TALSYGLSRYALEMVIRVLVLELIPLTAALFVAMRCTIGHGAQLAQLRQSGQLDALARQG 169

Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308
           LD VR  + PR  A + +   L  L++  A++   + ++         +   F    +  
Sbjct: 170 LDPVRTELLPRAIAGVFACVTLAALSSVVALVLVYLGVYGLNGAGLPGYTRMFGQVFSPG 229

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA 334
                 +K  F + A+ ++ M  G  
Sbjct: 230 VTLVLALKTLFFSLAVALIPMGAGLY 255


>gi|160898358|ref|YP_001563940.1| ABC-type transport system permease [Delftia acidovorans SPH-1]
 gi|160363942|gb|ABX35555.1| ABC-type transport system ipermease component [Delftia acidovorans
           SPH-1]
          Length = 267

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 4/206 (1%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMY-YVGVSGVPVVILISFVTGAVIAQQGAFQ 189
            LG V+       +S    +G   ++  Q+Y   G   +    L + +   +        
Sbjct: 30  YLGAVLLVLAMSPSSYR--RGARRAMAHQIYVQTGPILLGFTALAALLCAVITRIVIVTA 87

Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249
           L  +G   ++++++  + + E+  L  A+ +A R        I  ++   ++ A +  G 
Sbjct: 88  L-SYGLSRYALEMVVRVLVIELIPLTAALFVAMRCTIPNGTLIAQLRARGQLQAWQERGS 146

Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309
           D +R+ + PR    + +   L +L+   A++   + ++ +       +   F    T A 
Sbjct: 147 DPLRMALVPRAAGGVFASVTLAVLSCVVALVTVYLSVYGFTLAGLPGYTRIFGQIFTPAV 206

Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAV 335
               ++K  F +  + I+ M  G   
Sbjct: 207 TLVFVLKTWFFSLTVAIMPMASGLYA 232


>gi|134094912|ref|YP_001099987.1| hypothetical protein HEAR1705 [Herminiimonas arsenicoxydans]
 gi|133738815|emb|CAL61862.1| putative ABC-type transport system involved in resistance to
           organic solvents, permease component [Herminiimonas
           arsenicoxydans]
          Length = 258

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 104/251 (41%), Gaps = 7/251 (2%)

Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173
           +G+ +++++          G+++ +     A+  +      ++  Q+     + +    +
Sbjct: 1   MGRAMLRWLIGGWRIVLF-GMLVLSLSFSPATYQRDNRH--AIAYQIVLGTTANLVWFSV 57

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           ++ +   ++ +        +G   ++++++  + + E+  L  A+ +A R       E+ 
Sbjct: 58  LTALASLILIRIVVVTALSYGLSKYALEMVVRVLVLELIPLTAALFVALRRTLPDGVELA 117

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293
            M+   E+++++  G+D +R    PR  A + S+ +L  ++   ++I A + I+ +    
Sbjct: 118 EMRARGELESLQRQGIDPIRREFFPRAVAGVFSVLMLAAVSCVLSLILAYLSIYGFTHWA 177

Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN--SLGKKVT--TC 349
            A +          A     L+K  F + A+ ++ M         +   S  K       
Sbjct: 178 LAGYTRVVGQIFNPAVSMIFLLKTLFFSLAVSLIPMASSLYDTRSTQLHSRSKAANELAA 237

Query: 350 VVQSISIVIII 360
           +V+   ++++I
Sbjct: 238 MVRLFFVILLI 248


>gi|153006504|ref|YP_001380829.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5]
 gi|152030077|gb|ABS27845.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5]
          Length = 160

 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 44/158 (27%), Gaps = 11/158 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+G    R +G+W    I  +   +         +       SA+  +DT GA L+    
Sbjct: 12  EDGA--VRCSGSWTIDRIGRVERALRGLAWPRGAAVVVD--ASAVGSMDTAGAWLLKRTA 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
                  +   +     +  +L+       +    P+          +    G+   K  
Sbjct: 68  RGLERSGRTVTLR-LRPEHEALLEVVTSSGVVAAPPRARDRP----RVLATFGRGAWKAA 122

Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160
            +        G +            + +     +++ +
Sbjct: 123 RELGGLVTFFGEITVTAARARTGPLRVR--WRQVLQHV 158


>gi|291446775|ref|ZP_06586165.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349722|gb|EFE76626.1| ABC-transporter integral membrane protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 113

 Score = 70.0 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 51/98 (52%)

Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278
           +I+G  GSAI A++GS KI EE+DA+  MG+  ++ L+ PR+ A ++   LL  L +   
Sbjct: 16  VISGAPGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVG 75

Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316
            +G         D     + + F + A L +++    K
Sbjct: 76  TLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFK 113


>gi|152982121|ref|YP_001353647.1| ABC-type transport system, permease component [Janthinobacterium
           sp. Marseille]
 gi|151282198|gb|ABR90608.1| ABC-type transport system, permease component [Janthinobacterium
           sp. Marseille]
          Length = 271

 Score = 70.0 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 82/222 (36%), Gaps = 3/222 (1%)

Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165
                    G   V ++             +       + +   +    ++  Q+     
Sbjct: 6   PVPQTIVRTGGAAVGWLLGGWRILLFG---VIVLSLTFSPTTYKREHRYAIAHQLVLGTS 62

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
           + +    L+S +   ++ +        +G   +++D++  + + E+  L  A+ +A R  
Sbjct: 63  TNLIWFSLLSSLISVILIRIVMVTALSYGLSKYALDMVVRMLVLELIPLTAALFVALRRT 122

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
                E+  M+   ++ A+R  G+D +R    PR  A I S+ +L  ++   A+I   + 
Sbjct: 123 LPDGVELAEMRRRGDLLAMRQQGVDPIRTEFFPRAIAGIFSVWMLAAVSCVLALILTYLS 182

Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
           I+ +     A +          +     L+K  F + A+ ++
Sbjct: 183 IYGFTQWALADYTRVVGQIFNPSVSMIFLLKTLFFSLAVSLI 224


>gi|121604691|ref|YP_982020.1| ABC-type transport system permease [Polaromonas naphthalenivorans
           CJ2]
 gi|120593660|gb|ABM37099.1| ABC-type transport system ipermease component [Polaromonas
           naphthalenivorans CJ2]
          Length = 267

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 95/235 (40%), Gaps = 6/235 (2%)

Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162
              S+       G+   ++  +     H LG VI       + S   +   L L R +Y 
Sbjct: 3   PSASWHRRLTRTGQAAQQWFIEWWQLIH-LGAVILVL--TLSPSSYRRENRLVLGRHIYM 59

Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222
                +    L+  +   VI +        +G   +++ ++  + + E+  L  A+ +A 
Sbjct: 60  STAPILLGFSLLCALVTVVITRIVMVTALSYGLSQYALQVVIRVLVLELIPLSAALFVAL 119

Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282
           R      AE+ +M+ + E+D +R  G++ +R  + PR+ A + S   L  L+   A++ A
Sbjct: 120 RCTIPDGAELTAMQASGELDEMRRQGVEPIRREVLPRVVAGMFSGITLAALSCVVAVMVA 179

Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV---AMKEGFA 334
            + ++ +     AV+   F    T A     ++K  F   A+ ++   +   G  
Sbjct: 180 YVAVYGFAVSGLAVYTRLFGQVFTPAVTLIFVLKTVFFCLAVSLIPMASALYGMR 234


>gi|307777742|dbj|BAJ21267.1| ABC transporter permease [Pseudomonas aeruginosa]
          Length = 66

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 28/62 (45%)

Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368
           N+  G+IK+   A  +  +A+ +G+     S  + +  T  VV +   V+ +D +     
Sbjct: 3   NVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALM 62

Query: 369 FA 370
           F 
Sbjct: 63  FG 64


>gi|330826019|ref|YP_004389322.1| hypothetical protein Alide2_3477 [Alicycliphilus denitrificans
           K601]
 gi|329311391|gb|AEB85806.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           K601]
          Length = 278

 Score = 67.3 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 73/186 (39%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
                  L RQM       +     ++ +   VI          +G   ++++++  + +
Sbjct: 54  RPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMVIRVLV 113

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
            E+  L  A+ +A R+      ++  ++    + A+R  G D VR+ + PR+ A + +  
Sbjct: 114 LELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAGVHASI 173

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L  L+   A++ A + ++ +       +   F    T +      +K    + A+ ++ 
Sbjct: 174 TLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLAVALIP 233

Query: 329 MKEGFA 334
           M  G  
Sbjct: 234 MASGLY 239


>gi|315122739|ref|YP_004063228.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313496141|gb|ADR52740.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 147

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/98 (55%), Positives = 72/98 (73%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SENG+ VFR  G+W+S EIS+I+  +++ INKS Q D AIVDL  ITEIDTIG   I+YF
Sbjct: 18  SENGVKVFRLTGSWRSAEISKISKGILITINKSTQEDLAIVDLLEITEIDTIGVATIIYF 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
            EKY GKI+LQG++ H+EQLFS++S     K+K +  +
Sbjct: 78  TEKYRGKIQLQGMTAHMEQLFSIMSLNPNNKLKQKNQK 115


>gi|241764467|ref|ZP_04762489.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
 gi|241366102|gb|EER60693.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN]
          Length = 266

 Score = 66.9 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 81/222 (36%), Gaps = 4/222 (1%)

Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKF----KGFLLSLIRQMYYVGVSGVPVVILIS 175
           +        A   G ++                 +    +L R +Y      +    +++
Sbjct: 13  RLWRTLRRWALAWGRIVYLGAVVLVLVLSPSSYTRSARATLARHVYLDTAPILTGFTVLA 72

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235
            +   VI +        +G   ++++++  + + E+  L   + +A R       ++  +
Sbjct: 73  ALLCLVITRIVVVTALSYGLSRYALEMVIRVLVLELIPLTATLFVAMRCTIPAGTQLALL 132

Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295
           + +   DA+R  G D VR+ + PR+ A + +   L  L+   A++ A + ++ +      
Sbjct: 133 RQSGRFDALRAHGGDPVRMELLPRVAAGVFASITLAALSCVVALVMAYLSVYGFNLAGLP 192

Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337
            +   F    + A      +K  F + A+ ++    G     
Sbjct: 193 SYTRMFGHVFSPAVTLVFSLKTLFSSLAVALIPTTAGMYDAG 234


>gi|319762168|ref|YP_004126105.1| hypothetical protein Alide_1457 [Alicycliphilus denitrificans BC]
 gi|317116729|gb|ADU99217.1| protein of unknown function DUF140 [Alicycliphilus denitrificans
           BC]
          Length = 271

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 73/186 (39%)

Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208
                  L RQM       +     ++ +   VI          +G   ++++++  + +
Sbjct: 47  RPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMVIRVLV 106

Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
            E+  L  A+ +A R+      ++  ++    + A+R  G D VR+ + PR+ A + +  
Sbjct: 107 LELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAGVHASI 166

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328
            L  L+   A++ A + ++ +       +   F    T +      +K    + A+ ++ 
Sbjct: 167 TLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLAVALIP 226

Query: 329 MKEGFA 334
           M  G  
Sbjct: 227 MASGLY 232


>gi|99034269|ref|ZP_01314324.1| hypothetical protein Wendoof_01000880 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 55

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           KA      I + +   G+     +  +G   T+ VV S  ++I+ + +  + 
Sbjct: 2   KATAFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANYMITLI 53


>gi|91788521|ref|YP_549473.1| ABC-type transport system permease [Polaromonas sp. JS666]
 gi|91697746|gb|ABE44575.1| ABC-type transport system ipermease component [Polaromonas sp.
           JS666]
          Length = 267

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 80/188 (42%), Gaps = 3/188 (1%)

Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209
           +   L L R +Y      +    ++  +   V+ +        +G   +++ ++  + + 
Sbjct: 47  RESRLVLSRHIYLNTAPILLWFTVLCALVTVVLTRIVVVTALSYGLSQYALQVVIRVLVL 106

Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269
           E+  L  A+ +A R      AE+ +M+ + ++D +R  G D VR  + PR+ A + S   
Sbjct: 107 ELIPLTAALFVALRCTIPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAGMFSGIT 166

Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV-- 327
           L  L++  A++ A + ++ +     A +   F    + A     ++K  F   A+ ++  
Sbjct: 167 LAALSSVVALVVAYVAVYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPM 226

Query: 328 -AMKEGFA 334
            +   G  
Sbjct: 227 ASALYGMR 234


>gi|171056704|ref|YP_001789053.1| ABC-type transport system ipermease [Leptothrix cholodnii SP-6]
 gi|170774149|gb|ACB32288.1| ABC-type transport system ipermease component [Leptothrix cholodnii
           SP-6]
          Length = 249

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 80/212 (37%)

Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210
                + R +       +    +++ +   V+ +        +G   ++++++  + + E
Sbjct: 30  HNRREMARHIALGTGPALLGFTVLTTLISLVVIRIVLVTALSYGLSQYALEMVVRVLVLE 89

Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270
           +  L  A+  A R      AEI +++  +  DA    GL  +R  + PR+ A +    L+
Sbjct: 90  LIPLAAALFAALRCTIPNAAEIAALRARDGWDAWSPQGLQRLRSEVLPRMAASVFCALLM 149

Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330
             ++    ++ A ++++ +    F  +        + A      +K  F    + ++ + 
Sbjct: 150 AAVSCVVTLVVAYLLVYGFTSAGFGAYTHTVGRVFSPAVALIFGLKIVFFGLTVALMPIA 209

Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362
                              +V+   ++++I++
Sbjct: 210 SALDAAPRRLGRASAELQGLVRMFLVILLIEA 241


>gi|89900018|ref|YP_522489.1| ABC-type transport system permease [Rhodoferax ferrireducens T118]
 gi|89344755|gb|ABD68958.1| ABC-type transport system ipermease component [Rhodoferax
           ferrireducens T118]
          Length = 266

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 81/216 (37%), Gaps = 3/216 (1%)

Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171
              G+ +++         H LG ++       ++  +    + S  R +Y      +P  
Sbjct: 12  AAWGRALLRGAASWWQMIH-LGAIVLVLALSPSTYNRINRAITS--RHIYASTWQVLPWF 68

Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
             ++ +   V+ +        +G   +++ ++  + + E+  L  A+ +A R+G    A 
Sbjct: 69  TAMAALFSLVLIRIVVVTALNYGLSQYALQMVVRVLVLELIPLSAALFVALRAGMTFNAG 128

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291
             +       D    + L  +R  + PR+ A   S+  L ++ +   ++ A ++++    
Sbjct: 129 AQTNARPSPFDPSAPLSLTRLRADVVPRVLAGAFSVLTLAMINSVIVLVLAYLIVYGLSP 188

Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
                +         L+      +K  F + A+ +V
Sbjct: 189 WGLPGYTRTVGHVFDLSVTLGFALKTVFFSLAVAVV 224


>gi|108798622|ref|YP_638819.1| hypothetical protein Mmcs_1653 [Mycobacterium sp. MCS]
 gi|108769041|gb|ABG07763.1| conserved hypothetical protein [Mycobacterium sp. MCS]
          Length = 116

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 28/93 (30%)

Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           +I +  L  +A   +     ++   +Y     VF   F +      +F         A  
Sbjct: 1   MIVVVPLYCVALLMSFFSVRVITTAFYGQGSGVFDHYFDTFLNPQAVFFSFAVTVAAALV 60

Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356
           I ++    G         +G+ V      S+  
Sbjct: 61  IMLIHTYYGLNATGGPAGVGEAVGRATRTSLIA 93


>gi|330875117|gb|EGH09266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 113

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 49/105 (46%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
           ++      +     +LG                      L+RQ+Y VGV  + ++++   
Sbjct: 9   RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68

Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221
             G V+A QG   L+++G+E     ++++  LRE+G ++TA++ A
Sbjct: 69  FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFA 113


>gi|4580939|gb|AAD24544.1| YrbE1A [Mycobacterium leprae]
          Length = 112

 Score = 59.6 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 57/112 (50%)

Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233
           +S     ++       L+QF A   S    +I  + ++G L T +++AG   ++I A++G
Sbjct: 1   VSIPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADLG 60

Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
           +  I EEIDA+  +G+D +  L+ PR+ A  +   LL  L     ++G  + 
Sbjct: 61  ARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLF 112


>gi|270156845|ref|ZP_06185502.1| putative ABC transport system permease protein [Legionella
           longbeachae D-4968]
 gi|289164714|ref|YP_003454852.1| ABC transporter (permease) [Legionella longbeachae NSW150]
 gi|269988870|gb|EEZ95124.1| putative ABC transport system permease protein [Legionella
           longbeachae D-4968]
 gi|288857887|emb|CBJ11742.1| putative ABC transporter (permease) [Legionella longbeachae NSW150]
          Length = 252

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 77/223 (34%), Gaps = 10/223 (4%)

Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169
           +   +G   V  +         +G +  +         + +  LL+++R +YY GV  V 
Sbjct: 3   VLNKLGVYFVGLVYSFILFLRFMGHLYCSLINML--MGRLRLSLLNIVRTIYYAGVKLVI 60

Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
             + IS   G  +  +    L+ +  +     +   +   ++   +  V++  +      
Sbjct: 61  PFMFISTFLGISMVMKVNSILTPYNLQRDGRLIAQNILTHDLVPFIIGVLLCIQCALNF- 119

Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289
             I      E+++  + + ++     I P +  + I+  LL   A  +  I   +    +
Sbjct: 120 --INVKVNEEDLNVPQQVVVN----HILPVLIGINIAGGLLYAYAIAAFFISIYVTYQYF 173

Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI-VAMKE 331
                 V   R  +  TL ++   ++K       + + +    
Sbjct: 174 LYTNLYVPMIRILTAITLYDVVYSILKTTLYCTIVSLTIGYYY 216


>gi|329903553|ref|ZP_08273548.1| ABC-type transport system ipermease component [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548291|gb|EGF32984.1| ABC-type transport system ipermease component [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 239

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 1/197 (0%)

Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190
           +  L         + S  ++       R +Y      +P   ++S +   VI        
Sbjct: 1   MFYLGAIALVMALSPSSYYRANRAVTSRYIYTSTWQVLPWFTMLSALVCQVIIHIVVVTA 60

Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250
             +G   ++++++  + + E+  L  A+ +A RSG A  A    +    E D +  + + 
Sbjct: 61  ISYGLSQYALEMVVRVLVLELIPLSAALFVALRSGLAFDASTA-LPSRVEPDNLSRIDIK 119

Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310
            +R    P++ A   ++  L ++++   +I A I ++ +       +             
Sbjct: 120 RLRNEFVPQVIASAFAVISLAMISSVIVLILAYINVYGFLPWGLVDYTRTVGRVFDPIVT 179

Query: 311 FTGLIKAPFMACAIGIV 327
               +K      ++ ++
Sbjct: 180 IGFALKTLLFGLSVAVI 196


>gi|108798620|ref|YP_638817.1| putative ABC transport system permease protein [Mycobacterium sp.
           MCS]
 gi|108769039|gb|ABG07761.1| putative ABC transport system permease protein [Mycobacterium sp.
           MCS]
          Length = 161

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVI 172
             D   QA   G  IS+T +   +          ++RQ+  +G+           V VV 
Sbjct: 25  WRDLGDQARFYGQSISSTVQAATTYR------AEVLRQIAAIGLGAGSLAVVGGTVAVVA 78

Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232
            ++  T A +A Q   Q+SQ G E  +    + + +R      +A   A   G+   A++
Sbjct: 79  FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138

Query: 233 GSMKINEEIDAIRTMGLDFVRIL 255
           G+MKINEEIDA+  MG+  +  L
Sbjct: 139 GAMKINEEIDALAVMGIRPIAYL 161


>gi|41406191|ref|NP_959027.1| hypothetical protein MAP0093 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394539|gb|AAS02410.1| hypothetical protein MAP_0093 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 175

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 9/131 (6%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178
                      +             +   L L+  +        VG     V +++ F  
Sbjct: 28  LGHMLVFFVRAVLAVPTVLRQY---RTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84

Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238
           GA++A +G   L+  G    +  + S++  RE+  ++ ++  A ++G    A++G+M+I 
Sbjct: 85  GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144

Query: 239 EEIDAIRTMGL 249
           EEIDA+ ++ +
Sbjct: 145 EEIDALESLAI 155


>gi|304309830|ref|YP_003809428.1| predicted sulfate transporter/antisigma-factor antagonist STAS
          [gamma proteobacterium HdN1]
 gi|301795563|emb|CBL43761.1| predicted sulfate transporter/antisigma-factor antagonist STAS
          [gamma proteobacterium HdN1]
          Length = 114

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G    R  G      +++    ++  +       S +VDLS +TE DT G +L++    
Sbjct: 10 DGGCKIRPEGELTIYRVADYKPQLIQVLESHP---SIVVDLSRVTEFDTAGLQLLILLKR 66

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89
          +   +      + H  ++  L     
Sbjct: 67 EAKARGITSSFTGHSAEVTELFQLFD 92


>gi|302538621|ref|ZP_07290963.1| anti-sigma factor antagonist [Streptomyces sp. C]
 gi|302447516|gb|EFL19332.1| anti-sigma factor antagonist [Streptomyces sp. C]
          Length = 132

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 32/105 (30%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G      +G+        + + V   + +     +  +D +A++ +D+ G   ++    +
Sbjct: 8   GTGRIELSGDLDHHHAGLLVEAVDRLLAEQPGLRALRLDCAALSAVDSSGLAALLMVRRR 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
                    +     QL  L+  T            +    S + 
Sbjct: 68  TDTAGAGLHLDGRPVQLNRLLEITGTLHHLTAPRPGARATGSPQR 112


>gi|239981272|ref|ZP_04703796.1| hypothetical protein SalbJ_17681 [Streptomyces albus J1074]
 gi|291453129|ref|ZP_06592519.1| predicted protein [Streptomyces albus J1074]
 gi|291356078|gb|EFE82980.1| predicted protein [Streptomyces albus J1074]
          Length = 127

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 3/100 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R AG         +  +V   + +        +D + +T  D++G   ++    +
Sbjct: 28  GTLALRLAGALDHESADALVREVARRLAERPAPRLLRLDCAGLTACDSLGLSALLMIGRR 87

Query: 65  YHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
                  ++L     H+++L  +           ++P  +
Sbjct: 88  TGAAACALRLDRRPPHLDRLLEITGTHGYLVGPGEEPGPA 127


>gi|288941305|ref|YP_003443545.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180]
 gi|288896677|gb|ADC62513.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180]
          Length = 108

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +G+     ++E  + +   + +    +   +DLS ITE+D  G +L+++  E    +
Sbjct: 13 LILSGDLTIYTVAETLNRLRPHLGEHPTGE---LDLSGITELDGAGIQLLLWLRETARLR 69

Query: 69 IKLQGVSTH---IEQLFSLISF 87
               +S H   ++++  L+  
Sbjct: 70 GITLRLSAHGSVVDEVLDLLQL 91


>gi|261868150|ref|YP_003256072.1| putative NTP binding protein, contains STAS domain
          [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413482|gb|ACX82853.1| putative NTP binding protein, contains STAS domain
          [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 111

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 3/87 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +     R  G      +  +        + +  ++     DLS +  ID+ G  L+  F+
Sbjct: 15 DDKITLRLKGELSQNTLLPLWQQRASFLLARKTETLDVHWDLSQVNRIDSAGFALLCDFL 74

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   K  LQ   + +  L  L   + 
Sbjct: 75 NE--RKQLLQNPPSQLLTLADLFGLSD 99


>gi|291450033|ref|ZP_06589423.1| predicted protein [Streptomyces albus J1074]
 gi|291352982|gb|EFE79884.1| predicted protein [Streptomyces albus J1074]
          Length = 185

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE G  V +  G+     I+ +   +  A      S   +VDLS +   D+    + +  
Sbjct: 77  SEGGGIVVQLGGDLDLENITPLGPALSDAAATV--SGPVVVDLSGVGFADSSTVNVFLQA 134

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISF 87
                 +++   +S  +E+LF LI  
Sbjct: 135 YGAIGPRLRFAALSPFVERLFGLIGL 160


>gi|289207567|ref|YP_003459633.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix]
 gi|288943198|gb|ADC70897.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix]
          Length = 108

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +G      +  +   +   +          VDL  +T ID+ G  L++    + H +
Sbjct: 13 LALSGTLTFATVPGLESRIRALLAGLPA--RTRVDLGEVTRIDSAGVALLVTLWRRVHEQ 70

Query: 69 IKLQGVSTHIEQLFSLISF 87
              G  +  + L  L+  
Sbjct: 71 GGELGFHSIPQGLVPLVEL 89


>gi|255020162|ref|ZP_05292231.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756]
 gi|254970304|gb|EET27797.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756]
          Length = 114

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+  +V R +G+W+      + + +     +S+  D   +D   +   D+    L++ + 
Sbjct: 14  EDDQSVLRLSGDWRLDA---LDEALRSEELRSLAVDRVRLD--DVDAADSATLALLLDWQ 68

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           E+   + +   ++     L  L+     + +  + P
Sbjct: 69  ERALQRKRPLVLTGLGPGLRELVHLYGLEALLTEAP 104


>gi|251793146|ref|YP_003007874.1| hypothetical protein NT05HA_1442 [Aggregatibacter aphrophilus
          NJ8700]
 gi|247534541|gb|ACS97787.1| conserved hypothetical protein [Aggregatibacter aphrophilus
          NJ8700]
          Length = 119

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +G    + +G      +  +        +       + + DL+ IT ID+ G  L+  F+
Sbjct: 15 DGKMTLQLSGELSRNTLLPLWQQRASFLLEGQSSGQTILWDLTQITRIDSAGFALLCEFL 74

Query: 63 E 63
          +
Sbjct: 75 Q 75


>gi|52425764|ref|YP_088901.1| hypothetical protein MS1709 [Mannheimia succiniciproducens MBEL55E]
 gi|52307816|gb|AAU38316.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 120

 Score = 51.9 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 13/99 (13%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVM-------AINKSIQSDSAIVDLSAITEIDTIGAE 56
           +    FR  G      +  + ++             + I   +   DLS ++ ID+ G  
Sbjct: 15  DDRIAFRLDGELSRDTLLPLWNEFQKREQRSSFLSERQIADKNISWDLSQVSRIDSAGFA 74

Query: 57  LIMYFM------EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           L+   +      +     + L+ V   +  L  L+    
Sbjct: 75  LLCDLLHYCQAKKNADKTLLLENVPPQLLTLADLVGLAD 113


>gi|163792925|ref|ZP_02186901.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium
           BAL199]
 gi|159181571|gb|EDP66083.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium
           BAL199]
          Length = 528

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 116/347 (33%), Gaps = 29/347 (8%)

Query: 42  VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT----HRKKIKNQK 97
           +D+SA   +    A LI          + +  ++ H   L  +         R+    + 
Sbjct: 177 LDVSASKRL----AALIKSLSRDVGVPVVI--IAHHYRHLIDVADRVLMLDPRRHALVEL 230

Query: 98  PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS-YKFKGFLLSL 156
           P  +            +     +   +  +       +  + G   AS+ ++    L  L
Sbjct: 231 PANARRVERELEAIEAVAVPFDEMRAEPLAPEKATATIAVSAGPMRASAAWRLSWTLRFL 290

Query: 157 IRQMYYVG--VSGVPVVILISFVTGAVIA---QQGAFQLSQFGAEIFSIDLMSILQLREI 211
              ++ +    S +  V L S + G V      Q           I   D ++ L   E+
Sbjct: 291 AGYLWELCFSPSALLFVGLGSVIVGFVTTWFIFQ-YLPFRDLLMPIIHSDALAGLAFSEL 349

Query: 212 ---GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268
                L T V+IA R+ + I A+IG    +++I ++R + +     L    + A  ++  
Sbjct: 350 RVLAPLTTGVLIATRNTALIGADIGHKVYSDQIKSMRNLNIPHDVYLTGTVLVASAVASV 409

Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSR---FHSTATLANIFT---GLI--KAPFM 320
           +L I++       A    W Y     + +  R   F        +     G I  KA   
Sbjct: 410 VLVIMSECLTTWVAM-ATWSYIFPDESTYMWRDQYFQRMWPPGELIMDGTGWIAAKAIPS 468

Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                 +A+  G+        + + +   ++  +S V+I  S   + 
Sbjct: 469 IVGAAGIALYFGYRPKSTVVDINQSIAQALIWGLSFVLIWQSALTLI 515


>gi|152978466|ref|YP_001344095.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z]
 gi|150840189|gb|ABR74160.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z]
          Length = 116

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 4/90 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +     +  G      +  +       ++ K I   + I DLS IT ID+ G  L+   +
Sbjct: 15  DDRMTLQLIGELSRDTLLPLWRQRFAVLSDKQIAGQNVIFDLSNITRIDSAGFALLCELI 74

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
               K   + K   +     QL +L     
Sbjct: 75  HHVRKVQERDKGLTIEHAPSQLLTLAELFD 104


>gi|171060467|ref|YP_001792816.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
 gi|170777912|gb|ACB36051.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
          Length = 110

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +     R  G       +E+   ++       +  +  +DLS +T+IDT G +L+M   +
Sbjct: 9  DAPRTLRIQGELSIFRATELKQALLA------EPAATEIDLSGVTDIDTAGLQLLMLAKK 62

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89
                +   +  H   +  L    H
Sbjct: 63 HARRSGREVRLVGHSPAVIELFELLH 88


>gi|297196319|ref|ZP_06913717.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722897|gb|EDY66805.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 132

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60
                V   +G       + + + +   +     +   +VD + +   D+ G  ++++  
Sbjct: 27  RGDTVVLSLSGELDHDTAAPLREAIEEHL--HAGAKRLVVDCAGLDFCDSTGLNVLLHGR 84

Query: 61  -FMEKYHGKIKLQGVSTHIEQLFSLISFT 88
              ++   +++L G+   + ++F +    
Sbjct: 85  LAAQETDARVELAGLRPPVARMFEITGAH 113


>gi|169629235|ref|YP_001702884.1| hypothetical protein MAB_2149 [Mycobacterium abscessus ATCC 19977]
 gi|169241202|emb|CAM62230.1| Hypothetical protein MAB_2149 [Mycobacterium abscessus]
          Length = 217

 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 18/202 (8%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
            +S TG    ++      +    RQ   +    V  + +++     +I       +  FG
Sbjct: 34  FLSMTGGVLVAALTRPPAVREFFRQAGAIARVSVLPMCMVAIPLAVLIVLVLEALV--FG 91

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
              F                   ++ A    + + AE  S +I  +I A+R+ G+D    
Sbjct: 92  PTGF--------------PTHAVLVAAAAGATVVFAEADSARIQRDIGAMRSRGIDITHG 137

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314
            + PR+ A  ++   L  +A  +A  G           P ++F        +  NI   +
Sbjct: 138 FVVPRVLATAVAAVPLAFIAVAAA--GVYFFSAFGKHTPLSLFIGNLLQLMSPLNILIVV 195

Query: 315 IKAPFMACAIGIVAMKEGFAVG 336
           I+A  +    G++A   G    
Sbjct: 196 IEAASLGLIAGLIACYRGATAT 217


>gi|269126689|ref|YP_003300059.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268311647|gb|ACY98021.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 117

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TV    G      +  +   V  A          ++D++A+T +D+ G   ++   ++  
Sbjct: 19 TVLELTGELDLAGLPALRRRVDEACAA-PGPPRLVIDMAAVTFMDSCGLGGLVRCWKRVG 77

Query: 67 ---GKIKLQGVSTHIEQLFSL 84
             G+  L G+   + ++  +
Sbjct: 78 ERQGRFILVGLRPQVARVLDI 98


>gi|315633779|ref|ZP_07889069.1| NTP binding protein, contains STAS domain protein
          [Aggregatibacter segnis ATCC 33393]
 gi|315477821|gb|EFU68563.1| NTP binding protein, contains STAS domain protein
          [Aggregatibacter segnis ATCC 33393]
          Length = 119

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          N     + +G      +  +        + K+    +   DLS +T ID+ G  L+  F+
Sbjct: 15 NDRITLQLSGELSRNTLLPLWQQRASFLLGKASAEQNIYWDLSQVTRIDSAGFALLCDFL 74

Query: 63 E 63
          +
Sbjct: 75 Q 75


>gi|239943303|ref|ZP_04695240.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998]
          Length = 73

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%)

Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303
           +  MG+  ++ L+ PR+ A ++   LL  L +    +G         D     + + F +
Sbjct: 1   MEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSA 60

Query: 304 TATLANIFTGLIK 316
            A L +++    K
Sbjct: 61  LAQLPDLYISEFK 73


>gi|239978136|ref|ZP_04700660.1| putative anti-sigma factor antagonist [Streptomyces albus J1074]
          Length = 129

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           SE G  V +  G+     I+ +   +  A      S   +VDLS +   D+    + +  
Sbjct: 21  SEGGGIVVQLGGDLDLENITPLGPALSDAAATV--SGPVVVDLSGVGFADSSTVNVFLQA 78

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISF 87
                 +++   +S  +E+LF LI  
Sbjct: 79  YGAIGPRLRFAALSPFVERLFGLIGL 104


>gi|271968052|ref|YP_003342248.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
          roseum DSM 43021]
 gi|270511227|gb|ACZ89505.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor)-like protein [Streptosporangium roseum DSM
          43021]
          Length = 118

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 1/85 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          SEN   V R  G       +++   +   + +  +  +  VDLS +T +D+ G   ++  
Sbjct: 11 SENATLVLRPEGELDVNTAAQLQAWLDDYLARGPRPATL-VDLSGLTFVDSPGLAALLAM 69

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
            +  G+ +    +    Q   L+ 
Sbjct: 70 RRRLTGEGRAVAYADPTPQPARLLR 94


>gi|284042296|ref|YP_003392636.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283946517|gb|ADB49261.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 132

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           GI+V    G        E+ + +   ++    +D  +VDLS    +D  G + ++    +
Sbjct: 25  GISVIAVQGELDLFTAPELRERLREHMDDPEPADDLVVDLSGCAFVDASGCQALLRAARQ 84

Query: 65  Y---HGKIKLQGVSTHIEQLFSLISFTH 89
                 ++ +   +    ++F+++    
Sbjct: 85  LTAVGRRLAIVNTNPGNTRIFTVMGLDE 112


>gi|332163076|ref|YP_004299653.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318604044|emb|CBY25542.1| uncharacterized protein YrbB [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667306|gb|ADZ43950.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 113

 Score = 49.6 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 8/100 (8%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
                G      +  +       +     +D   +D+S +  +D+ G  L+++F E   K
Sbjct: 13  TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104
               + + GVS  +  L  L +      ++   P  +   
Sbjct: 68  QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIP 107


>gi|269124391|ref|YP_003297761.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268309349|gb|ACY95723.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 110

 Score = 49.6 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+    V    G         +   +   I    ++D  +VDLS +   D+ G  +++  
Sbjct: 9   SQGDYAVVTATGELDLYTAPRLQTALASLIRD--RADRVVVDLSGVEFCDSTGVNVLLAA 66

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           M++     G ++L G+   + ++  +        I    P
Sbjct: 67  MKRLQEQGGTLELAGLRPPVRRILQVTGLDSVFTIAEAVP 106


>gi|223041899|ref|ZP_03612085.1| hypothetical protein AM202_0495 [Actinobacillus minor 202]
 gi|223017315|gb|EEF15740.1| hypothetical protein AM202_0495 [Actinobacillus minor 202]
          Length = 109

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  N   V   +G      +  +      +   + ++     DL AI+ ID+ G  L+  
Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQ-RASFLSTRKNQHIYWDLKAISRIDSAGFVLLTE 70

Query: 61 FME 63
           + 
Sbjct: 71 LLH 73


>gi|220933921|ref|YP_002512820.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995231|gb|ACL71833.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7]
          Length = 111

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 2/91 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+     R  G      ++ +                A VD+SA+  +D+ G  L++ ++
Sbjct: 8  ESEGDTLRLHGGLDLATVAGLWSSSQRLFES--TQPPARVDVSAVDRVDSAGVALLVQWV 65

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
               +     V      +  LI+    + +
Sbjct: 66 GMARARGVALRVEGMSPAMGDLIALADLEPL 96


>gi|332111478|gb|EGJ11461.1| hypothetical protein RBXJA2T_14076 [Rubrivivax benzoatilyticus JA2]
          Length = 100

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 1/97 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G       +E+ + ++ A+  +   D   +DLSA+TE D+ G +L+M   +    
Sbjct: 5   TLAIEGELTIYRAAELRETLLAALAAAPDGD-LTLDLSAVTEFDSAGVQLLMAAKKSAEA 63

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104
           + +   +  H   +                      +
Sbjct: 64  RSRALRLVRHSPSVLDGFQVLDLAGHFGDPLTPPPSH 100


>gi|315125514|ref|YP_004067517.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913]
 gi|315014027|gb|ADT67365.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913]
          Length = 97

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59
          +S+      R +G      I     + ++   +  +  +   DLS +T +DT G A LI 
Sbjct: 6  ISQVDEQHLRVSGELTHNSIGN---ERLLNTKRQTEHKTLYFDLSEVTRVDTAGLAWLIH 62

Query: 60 YF--MEKYHGKIKLQGVSTHIEQLFSL 84
           F   ++   +++LQ     ++ L  L
Sbjct: 63 SFTEFKQQGIRLELQNPPEQLQNLMQL 89


>gi|123443931|ref|YP_001007902.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122090892|emb|CAL13774.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 107

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
                G      +  +       +     +D   +D+S +  +D+ G  L+++F E   K
Sbjct: 13  TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
             G + + GVS  +  L  L +      ++   P
Sbjct: 68  QGGSLVIIGVSDRLSTLIELYNLRDVIPVETVIP 101


>gi|307129074|ref|YP_003881090.1| hypothetical protein Dda3937_00693 [Dickeya dadantii 3937]
 gi|306526603|gb|ADM96533.1| predicted protein [Dickeya dadantii 3937]
          Length = 100

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++G    R  G+     +  +       +N     DS+++D+  +  +D+ G  L+++F 
Sbjct: 10 DDGA--LRLEGDLDRNTLLPLWQQREALLN-----DSSVLDVGQVARVDSSGLALLVHFY 62

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           +   + K   +    ++L +LI   +  +I   +P 
Sbjct: 63 HQQEQRGKPLAIIGASDRLRTLIQLYNLSEIIPVRPA 99


>gi|330862749|emb|CBX72891.1| uncharacterized protein yrbB [Yersinia enterocolitica W22703]
          Length = 115

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 8/100 (8%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
                G      +  +       +     +D   +D+S +  +D+ G  L+++F E   K
Sbjct: 15  TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 69

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104
               + + GVS  +  L  L +      ++   P  +   
Sbjct: 70  QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIP 109


>gi|240948312|ref|ZP_04752698.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305]
 gi|240297351|gb|EER47892.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305]
          Length = 109

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  N   V   +G      +  +      +   + ++     DL AI+ ID+ G  L+  
Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQ-RASFLSTRKNQHIYWDLKAISRIDSAGFVLLTE 70

Query: 61 FME 63
           + 
Sbjct: 71 LLH 73


>gi|254362422|ref|ZP_04978531.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213]
 gi|261494091|ref|ZP_05990594.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. BOVINE]
 gi|261496068|ref|ZP_05992478.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. OVINE]
 gi|153094011|gb|EDN74927.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213]
 gi|261308318|gb|EEY09611.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. OVINE]
 gi|261310257|gb|EEY11457.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica
          serotype A2 str. BOVINE]
          Length = 107

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67
           + +G      +  +       ++ + +  S   DL  IT ID+ G  L+   +  YH  
Sbjct: 19 VKLSGELTRNTLLPLWKQRASFLSPTGK-QSLYWDLKEITRIDSAGFTLLAELLNHYHKI 77

Query: 68 -KIKLQGVSTHIEQLFSLISF 87
              L      +  L +L   
Sbjct: 78 IPNSLINTPDSVRTLAALYDL 98


>gi|270263236|ref|ZP_06191506.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13]
 gi|270042924|gb|EFA16018.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13]
          Length = 100

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  + +     +     +D   +D+S +  +D+ G  L+++  E+   
Sbjct: 13 TLILRGELDRETLLPLWEQRETLL-----ADKTALDVSQLQRVDSSGLALLVHLREQQRQ 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +S   ++L +LI+ 
Sbjct: 68 RGVELKISGATDRLKTLIAL 87


>gi|261364832|ref|ZP_05977715.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
 gi|288566870|gb|EFC88430.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
          Length = 92

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  AD       +    D+  VDLS +   D+    L++  + +  G
Sbjct: 9  TLHISGDITVKTLT--ADAFTRFRQQCRLKDTHAVDLSGVGRADSACVSLLLDALRRPDG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          KI LQG+   +  L  L  
Sbjct: 67 KITLQGIPESVRTLSELYE 85


>gi|165976708|ref|YP_001652301.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|307246206|ref|ZP_07528287.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250540|ref|ZP_07532484.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255186|ref|ZP_07537004.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259624|ref|ZP_07541348.1| hypothetical protein appser11_14220 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|165876809|gb|ABY69857.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|306852815|gb|EFM85039.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857433|gb|EFM89545.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306862059|gb|EFM94035.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866269|gb|EFM98133.1| hypothetical protein appser11_14220 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 117

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 3/83 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66
            + +G      +  +       ++    +     DL  +  +D+ G  L+   +   +  
Sbjct: 20  VKLSGELTRDTLLPLWRQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNYYQKQ 78

Query: 67  GKIKLQGVSTHIEQLFSLISFTH 89
               L  V   ++ L  L   T 
Sbjct: 79  TPNCLIHVPEVVKTLADLFDLTD 101


>gi|296268033|ref|YP_003650665.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
 gi|296090820|gb|ADG86772.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
          Length = 116

 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S  G  +   +G        ++  +    I+ S Q    ++D+S +   D+ G  +++  
Sbjct: 9  SSGGTAIVAVSGEIDLYTAPQLQAEFARLISTSPQ--RVVIDMSEVEFCDSTGVNVLLSA 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
          +++   +     V+     +  ++ 
Sbjct: 67 LKRLRERGGDLEVAAPRSAVRKILQ 91


>gi|271964584|ref|YP_003338780.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270507759|gb|ACZ86037.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
           factor)-like protein [Streptosporangium roseum DSM
           43021]
          Length = 126

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 1/106 (0%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G+++   AG         +   +  A   S      IVD+  ++  D++G   ++  +
Sbjct: 18  RDGVSIIHVAGELDLATAPTLRRHLRAATLPS-APPVLIVDVREVSFCDSVGLSELVLAL 76

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
            +     +   +S     L   +  T       +            
Sbjct: 77  HRSQTGGQRPMLSGQHRSLERPLYRTGLHNAFERHASCDAALRQVG 122


>gi|303250630|ref|ZP_07336827.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307252923|ref|ZP_07534811.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650618|gb|EFL80777.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859561|gb|EFM91586.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 117

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66
            + +G      +  +       ++    +     DL  +  +D+ G  L++  +   +  
Sbjct: 20  VKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLVELLNYYQKQ 78

Query: 67  GKIKLQGVSTHIEQLFSLISFTH 89
               L  V   ++ L  L   T 
Sbjct: 79  TPNCLIHVPEVVKTLADLFDLTD 101


>gi|261378132|ref|ZP_05982705.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685]
 gi|269145592|gb|EEZ72010.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685]
          Length = 92

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
            R +G+     ++   +       +   +    VD S +   D+    L++  + +   
Sbjct: 9  TLRVSGDITVKTLTG--EAFERFQQQCRLNGIVAVDFSGVNRADSACVSLLLEILRRRKD 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           IKL G+   +  L  L  
Sbjct: 67 SIKLTGIPESVRALSELYE 85


>gi|15602043|ref|NP_245115.1| hypothetical protein PM0178 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720398|gb|AAK02262.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 125

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 4/88 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAI-NKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           N     R AG      +  +       +  +  Q  +   DL+ +  +D+ G  L+   +
Sbjct: 15  NDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVARVDSAGFALLCDFI 74

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISF 87
              +K   +     +     QL +L   
Sbjct: 75  RHCQKVMKQETSIILHNAPRQLLTLADL 102


>gi|268612024|ref|ZP_06145751.1| anti-sigma-factor antagonist domain-containing protein
          [Ruminococcus flavefaciens FD-1]
          Length = 101

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +ENG +V   +G       +++   +   I  S +    ++DL  IT +D+ G  LIM  
Sbjct: 7  NENGTSVAYISGEIDHHNAADLRSQLDRYIISS-RPSQLVIDLEGITFMDSSGIGLIMGR 65

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84
             M+   G++ +     +I ++  L
Sbjct: 66 SKLMKTCGGRLSVHSPQPYIRRVLKL 91


>gi|269126279|ref|YP_003299649.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268311237|gb|ACY97611.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 126

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 5/108 (4%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +  +G       G         +      A++++       VDL  +T  D  G  +++ 
Sbjct: 21  VGADGRVTIAIRGEMDLASAGSLYRRARAALSEA--DGDVRVDLGGVTFCDAQGLSVLVR 78

Query: 61  F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
                ++  G++ L+ V  ++ +L  +     R  +    P       
Sbjct: 79  IANDAQRQGGRVLLERVPPNVARLLRITGLDRRFPMSAGAPSIPEPLG 126


>gi|258654237|ref|YP_003203393.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233]
 gi|258557462|gb|ACV80404.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233]
          Length = 136

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 38/107 (35%), Gaps = 4/107 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMA-INKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
              T+ R  G   + E   +A ++               +DLS ++ +D  G E+++   
Sbjct: 30  GAGTLVRIVGRLDAREAPRVARELAAVNRLPRRGPPRLTLDLSGVSYLDDTGLEVLLQLQ 89

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           ++     G+++LQ  +  + +L           ++    +       
Sbjct: 90  DRLAAQGGELELQSPTAAVVRLLHEAHLHGAAGLRAPARELRPPTGP 136


>gi|88811863|ref|ZP_01127116.1| STAS domain protein [Nitrococcus mobilis Nb-231]
 gi|88790747|gb|EAR21861.1| STAS domain protein [Nitrococcus mobilis Nb-231]
          Length = 119

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 3/87 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S +        G      +  ++ ++        Q     VDL+ +  +D+ G  L++ +
Sbjct: 8  SRDEEGRLALLGELTFETVPGLSKELDSMFK---QGPRLCVDLAGLERVDSAGLALLIEW 64

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
                           +QL +L   +
Sbjct: 65 ARLTRTSGHALEFINTPQQLLTLARLS 91


>gi|32035040|ref|ZP_00135106.1| COG3113: Predicted NTP binding protein (contains STAS domain)
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208754|ref|YP_001053979.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae L20]
 gi|190150608|ref|YP_001969133.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303252082|ref|ZP_07338251.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248313|ref|ZP_07530338.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307257354|ref|ZP_07539124.1| hypothetical protein appser10_13520 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307263953|ref|ZP_07545556.1| hypothetical protein appser13_13610 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097546|gb|ABN74374.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915739|gb|ACE61991.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649064|gb|EFL79251.1| putative anti-sigma factor B antagonist [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306855183|gb|EFM87361.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306864204|gb|EFM96117.1| hypothetical protein appser10_13520 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306870715|gb|EFN02456.1| hypothetical protein appser13_13610 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 117

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 3/83 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66
            + +G      +  +       ++    +     DL  +  +D+ G  L+   +   +  
Sbjct: 20  VKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNYYQKQ 78

Query: 67  GKIKLQGVSTHIEQLFSLISFTH 89
               L  V   ++ L  L   T 
Sbjct: 79  TPNCLIHVPEVVKTLADLFDLTD 101


>gi|301155767|emb|CBW15235.1| predicted protein [Haemophilus parainfluenzae T3T1]
          Length = 111

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 5/91 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62
           N     + +G      +  +       +++   + S I  DL+ I  ID+ G  L+  F+
Sbjct: 12  NDKIALQLSGELSRNTLLPLWQQRASFLSEKQNNQSLIEFDLTEINRIDSAGFALLCDFL 71

Query: 63  EKYHG----KIKLQGVSTHIEQLFSLISFTH 89
                    K++L      +  L  L++ +H
Sbjct: 72  HDCEQLPNKKVRLINPPEQLLTLADLVNLSH 102


>gi|255067846|ref|ZP_05319701.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
 gi|255047937|gb|EET43401.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
          Length = 92

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  + + +G
Sbjct: 9  TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLDALRRPNG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          KI LQG+   +  L  L  
Sbjct: 67 KISLQGIPESVRTLSELYE 85


>gi|119855026|ref|YP_935631.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Mycobacterium
           sp. KMS]
 gi|119697744|gb|ABL94816.1| ABC-type transport system involved in resistance to organic
           solvents permease component-like protein [Mycobacterium
           sp. KMS]
          Length = 206

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 39/92 (42%)

Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188
             I+G + + T +   +  K        + Q ++V    +   + +S     + +     
Sbjct: 25  LSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84

Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
            L++FGA  FS    ++  + +IG  +T +++
Sbjct: 85  LLAEFGAADFSGTGAALGAVNQIGPFVTVLVV 116


>gi|219870958|ref|YP_002475333.1| putative anti-sigma factor B antagonist [Haemophilus parasuis
           SH0165]
 gi|219691162|gb|ACL32385.1| putative anti-sigma factor B antagonist [Haemophilus parasuis
           SH0165]
          Length = 112

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 3/88 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           N   + + +G      +  +       ++    S     DL  +T ID+ G  L+   + 
Sbjct: 15  NESLMVQLSGELTRDTLLPLWKQRASFLSPK-SSQHIYWDLKGLTSIDSSGFTLLAELLH 73

Query: 64  --KYHGKIKLQGVSTHIEQLFSLISFTH 89
             +   K  L  V   +  L  L     
Sbjct: 74  LYQQKNKNCLFNVPQAVHSLAELFDLAD 101


>gi|148823177|ref|YP_001287931.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11]
 gi|148721704|gb|ABR06329.1| hypothetical integral membrane protein yrbE3A [Mycobacterium
           tuberculosis F11]
          Length = 132

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175
           K   +  +        LG   + T +     +K        + Q ++V        +L++
Sbjct: 11  KAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMT 70

Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234
                +        L+  GA  FS    +I  + +   ++T +++AG   +A+ A++G+
Sbjct: 71  IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 129


>gi|311742619|ref|ZP_07716428.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
 gi|311314247|gb|EFQ84155.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
          Length = 116

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 39/105 (37%)

Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
                   G   + +G      +  +      + Q +++        +L++     VI  
Sbjct: 6   FVRTLSTFGDFYTFSGNVFRQMFTRRFQFREFVSQAWFITTVSFGPALLVAIPFCVVIIF 65

Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229
           Q    L Q GA   +    ++  +REIG +++ +++AG     + 
Sbjct: 66  QVNQLLIQIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGPGTVT 110


>gi|285017152|ref|YP_003374863.1| anti-sigma factor antagonist transcription regulator protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472370|emb|CBA14875.1| hypothetical anti-sigma factor antagonist transcription regulator
           protein [Xanthomonas albilineans]
          Length = 127

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 41/119 (34%), Gaps = 5/119 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
           +++       +G   +     + + +   +   I   + ++DLS +  I + G   I   
Sbjct: 11  AQDKRQRITLSGRLDTHTYQTLDEALAPLLATPIT--TLVLDLSQLDYISSAGIRSIFKA 68

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
              +    G++ +   +  I ++F L+      +I     +   + +  +      G  
Sbjct: 69  RKLLAARDGQVLVVNPAPQIRKVFDLVKAVPLNEIFTSIQELDDYLDEMQRRVVEQGDS 127


>gi|291439807|ref|ZP_06579197.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342702|gb|EFE69658.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 295

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    +    G         +A+ +      + + D   +D+S +  +DT G E +    
Sbjct: 93  EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 149

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113
               +    +     +    ++  L        ++   P+ +    +       
Sbjct: 150 DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 203


>gi|302867297|ref|YP_003835934.1| sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
 gi|302570156|gb|ADL46358.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
          Length = 123

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 2/95 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G    R AG        E+ D V     +        +D + +   D+ G   ++   
Sbjct: 22  DAGSARVRLAGELDFDTAPELVDAVADL--RRDGHQELELDFAGVDLCDSSGLSALVVIH 79

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
               G I+L  ++  I  L              Q+
Sbjct: 80  RAGTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114


>gi|311277836|ref|YP_003940067.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1]
 gi|308747031|gb|ADO46783.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1]
          Length = 96

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65
           R  G      I  + D              +I+DLS +T +DT G  L+++    +   
Sbjct: 14 LRLQGELDQDVIPPLWDA-----RAEATVGVSILDLSDVTRVDTAGVALLVHFVALIRAQ 68

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHR 90
              ++ G S  ++ L  L + +  
Sbjct: 69 GKTPEIVGKSEKMQTLVQLYNLSDD 93


>gi|157373329|ref|YP_001471929.1| hypothetical protein Ssed_0188 [Shewanella sediminis HAW-EB3]
 gi|157315703|gb|ABV34801.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 98

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
            +         I  I   +   +          +D+S ++ +DT GA+L+  F +  + 
Sbjct: 5  TIKLDSELTIRNIQPIFARLSELL---THDKLLHIDVSQLSRVDTAGAQLLYLFSQTCNA 61

Query: 68 KIKLQGVSTHIEQLFSLISFT 88
          +           +L S +   
Sbjct: 62 RSLKVEWQGGQPELRSNLKSL 82


>gi|254672984|emb|CBA07467.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
          Length = 100

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 17 TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 75 SVRLTGIPESVRALSELYE 93


>gi|225873833|ref|YP_002755292.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196]
 gi|225791854|gb|ACO31944.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196]
          Length = 117

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 2  SENGITVFRFAGNWK-SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + + + V    G+   SP + ++ + +   ++ +      + D++ +  +D+ G   ++ 
Sbjct: 10 ASDELLVITLTGSMTMSPALDQLMEQLYAQLDTNPP-RHIVFDMAGVDYLDSTGLGFLVR 68

Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISF 87
              +EK  G I+L G S  ++ L ++   
Sbjct: 69 INRDLEKRDGFIRLCGTSERVQALMAMTRT 98


>gi|117164995|emb|CAJ88547.1| putative anti sigma factor antagonist [Streptomyces ambofaciens
           ATCC 23877]
          Length = 128

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 2/114 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+G TV    G       +EIA  +     +       ++DLS +   D  G  L+    
Sbjct: 17  EHGHTVLELRGEIDIASAAEIAPRLEREAGR--PGARVVLDLSGVEFFDCSGLRLLYRAR 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
            +         +         ++  T   ++   +          +      G 
Sbjct: 75  RQVLDHGGQVHLVCTHPLTLRMLRITGLARLLPPRATLDEVLGLTRPAGRRTGH 128


>gi|296166009|ref|ZP_06848461.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295898630|gb|EFG78184.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 126

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 27/86 (31%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++       +  G+     +  + D     + +        +DL+A+   D+ G   ++ 
Sbjct: 8  VTTGRTARLQVRGDLVYETVDAMVDAADRLLGQQPTPADLHLDLAALEFCDSAGLSGLLL 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
             + H       +      L  ++ 
Sbjct: 68 VHRRSHQAGARLHLDNRPRFLDRILD 93


>gi|330468644|ref|YP_004406387.1| sulfate transporter/antisigma-factor antagonist stas
          [Verrucosispora maris AB-18-032]
 gi|328811615|gb|AEB45787.1| sulfate transporter/antisigma-factor antagonist stas
          [Verrucosispora maris AB-18-032]
          Length = 114

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G    R  G+       E+   V     +       ++DL+ +   D+ G   ++     
Sbjct: 16 GRAELRLTGDLDFDSAPELISAVEKL--RRDGYRHLLIDLAGVAICDSSGLSALVVAHRG 73

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
              I+L G++ ++ QL        
Sbjct: 74 SPVPIRLVGINPNLRQLLDRTGLAE 98


>gi|261393290|emb|CAX50918.1| conserved hypothetical protein [Neisseria meningitidis 8013]
          Length = 92

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  TLHISGDITVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|303249034|ref|ZP_07335278.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
 gi|302489557|gb|EFL49498.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
          Length = 259

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           E+G  V   AG+  +     +       + +       ++DL+ +  ID++G  L++   
Sbjct: 164 EDGTAVVSPAGDIVASVADALRARFKELLQEHPGG--LVIDLARVELIDSVGIGLLIAVH 221

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISF 87
             + K  G++ L+ V+  +  L   +  
Sbjct: 222 NTLGKKGGRLVLRNVNPDLAALLRTMRL 249


>gi|148976137|ref|ZP_01812880.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3]
 gi|145964532|gb|EDK29786.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3]
          Length = 109

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 4/99 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                  G+  +    +   D+   I+         VD S +  +D+ G   I+Y  ++ 
Sbjct: 12  TLTLSIFGDLDAAGSRDAQTDIDDVISND-GHQEIEVDFSQVEFLDSSGVGAIVYMFKRL 70

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
                 ++L+ VS    ++ +L+   H   + ++ P  S
Sbjct: 71  TERERDMRLENVSGQPLEIMNLLRIGHAIPVNSKNPTNS 109


>gi|170728554|ref|YP_001762580.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908]
 gi|169813901|gb|ACA88485.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908]
          Length = 100

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            ++   +G     EI  +       +N+ ++    ++DLS ++  D+ G   I+  M   
Sbjct: 8   GSICHISGRLSQEEIPALWLRRKSLLNREVE----VIDLSELSYSDSAGIAFILELMSVA 63

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
             + +    ++  EQL  LI     +   N++ ++ 
Sbjct: 64  RAEKRSLSFTSASEQLSKLIDLYDLELFFNEEAKQG 99


>gi|325129423|gb|EGC52254.1| hypothetical protein NMBOX9930304_1776 [Neisseria meningitidis
          OX99.30304]
 gi|325135553|gb|EGC58171.1| hypothetical protein NMBM0579_1853 [Neisseria meningitidis M0579]
 gi|325201401|gb|ADY96855.1| conserved hypothetical protein [Neisseria meningitidis
          M01-240149]
 gi|325207382|gb|ADZ02834.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 92

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|161869248|ref|YP_001598415.1| hypothetical protein NMCC_0253 [Neisseria meningitidis 053442]
 gi|218767467|ref|YP_002341979.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491]
 gi|254804225|ref|YP_003082446.1| NTP binding protein [Neisseria meningitidis alpha14]
 gi|304388518|ref|ZP_07370621.1| conserved hypothetical protein [Neisseria meningitidis ATCC
          13091]
 gi|121051475|emb|CAM07768.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491]
 gi|161594801|gb|ABX72461.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|254667767|emb|CBA03701.1| NTP binding protein [Neisseria meningitidis alpha14]
 gi|304337515|gb|EFM03681.1| conserved hypothetical protein [Neisseria meningitidis ATCC
          13091]
          Length = 100

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 17 TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 75 SVRLTGIPESVRALSELYE 93


>gi|322515304|ref|ZP_08068301.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae
           ATCC 25976]
 gi|322118680|gb|EFX90892.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae
           ATCC 25976]
          Length = 119

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 3/83 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66
            + +G      +  +       ++    +     DL  +  +D+ G  L+   +   +  
Sbjct: 20  VKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNHYQKQ 78

Query: 67  GKIKLQGVSTHIEQLFSLISFTH 89
               L      ++ L  L   + 
Sbjct: 79  TPNWLINSPETVKTLAELFDLSE 101


>gi|148657866|ref|YP_001278071.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1]
 gi|148569976|gb|ABQ92121.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1]
          Length = 117

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 39/110 (35%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           ++G+T+ R  G       +++  D+   +         I DL  ++ +D+ G   ++   
Sbjct: 9   DDGVTIVRMEGRLDLLTAADVKRDLADLVAD--GRRRLIFDLERVSFVDSSGLGALISGL 66

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
               +  G +++   +  I  L  L +     +      +    Y S   
Sbjct: 67  KAARQVGGDLRIARANEQIRTLLKLTTLERVLRPYETIEEARAGYTSIAA 116


>gi|84385523|ref|ZP_00988554.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01]
 gi|86146028|ref|ZP_01064355.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222]
 gi|218709510|ref|YP_002417131.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32]
 gi|84379503|gb|EAP96355.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01]
 gi|85836233|gb|EAQ54364.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222]
 gi|218322529|emb|CAV18688.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32]
          Length = 109

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 4/99 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                  G+  +    +   D+   I+         VD S +  +D+ G   I+Y  ++ 
Sbjct: 12  TLTLSIFGDLDAAGSRDAQTDIDDVISND-GHPEIEVDFSQVEFLDSSGVGAIVYMFKRL 70

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
                 ++L+ V+    ++ +L+   H   + ++ P  S
Sbjct: 71  TERERNMRLENVTGQPLEIMNLLRIGHAIPVNSKNPTNS 109


>gi|15644192|ref|NP_229241.1| anti-sigma factor antagonist, putative [Thermotoga maritima MSB8]
 gi|170289123|ref|YP_001739361.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2]
 gi|281412788|ref|YP_003346867.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10]
 gi|7227948|sp|Q9X1F5|Y1442_THEMA RecName: Full=Putative anti-sigma factor antagonist TM_1442
 gi|55670421|pdb|1VC1|A Chain A, Crystal Structure Of The Tm1442 Protein From Thermotoga
          Maritima, A Homolog Of The Bacillus Subtilis General
          Stress Response Anti-Anti-Sigma Factor Rsbv
 gi|55670422|pdb|1VC1|B Chain B, Crystal Structure Of The Tm1442 Protein From Thermotoga
          Maritima, A Homolog Of The Bacillus Subtilis General
          Stress Response Anti-Anti-Sigma Factor Rsbv
 gi|58176711|pdb|1SBO|A Chain A, Solution Structure Of Putative Anti Sigma Factor
          Antagonist From Thermotoga Maritima (Tm1442)
 gi|4982007|gb|AAD36511.1|AE001796_3 anti-sigma factor antagonist, putative [Thermotoga maritima MSB8]
 gi|170176626|gb|ACB09678.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2]
 gi|281373891|gb|ADA67453.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10]
          Length = 110

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++   + R  G+  +   SE+ + +   I+ + +    ++DLS+++ +D+ G   ++  +
Sbjct: 11 QDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDSAGLGTLVVIL 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +      K   +S+  E +  ++  TH
Sbjct: 70 KDAKINGKEFILSSLKESISRILKLTH 96


>gi|326775062|ref|ZP_08234327.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1]
 gi|326655395|gb|EGE40241.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1]
          Length = 120

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G  V   +G+     ++ +  D+ +A      S   +VDLS +   D+    +++   
Sbjct: 18  ERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQGN 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
               G+++L   S  +++L  +I       +
Sbjct: 76  TALGGRLRLAAPSPFMQRLIGMIGLDSALPV 106


>gi|255604967|ref|XP_002538316.1| conserved hypothetical protein [Ricinus communis]
 gi|223512772|gb|EEF24067.1| conserved hypothetical protein [Ricinus communis]
          Length = 187

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           S+         G       +E+   ++ A+      D+  +DLS +TE D  G +L++  
Sbjct: 91  SQGAAACLAVEGEMTIYRAAELHPVLLDAVR---THDAPALDLSDVTEFDCAGMQLLLVA 147

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
               ++   ++ L+G S  +   F+++  T   + 
Sbjct: 148 RREAQRLGKQLVLRGASPAVRDAFAMLGMTDDGEP 182


>gi|296104904|ref|YP_003615050.1| STAS domain-containing protein [Enterobacter cloacae subsp.
          cloacae ATCC 13047]
 gi|295059363|gb|ADF64101.1| STAS domain-containing protein [Enterobacter cloacae subsp.
          cloacae ATCC 13047]
          Length = 97

 Score = 46.1 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
            + +G      ++ + D               ++DLS +T +DT G  L+ + +   +K
Sbjct: 13 TLKLSGELDQDLLNPLWDK-----RHDAMQGVTLIDLSGVTRVDTAGVALLAHLIAVGKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
              + L G S ++  L  L +        
Sbjct: 68 QGATVTLHGASDNVVTLAQLYNLPQDVLPH 97


>gi|54307968|ref|YP_128988.1| hypothetical protein PBPRA0773 [Photobacterium profundum SS9]
 gi|46912394|emb|CAG19186.1| Hypothetical protein PBPRA0773 [Photobacterium profundum SS9]
          Length = 103

 Score = 46.1 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
              G      ++E+   ++  ++   ++ S + DL+ ++E+DT G +L+    ++    
Sbjct: 16 LSLTGEMSIYSVTELKPRLLAYLH---ENQSVLFDLTEVSEMDTAGIQLLWLCHQEAAKV 72

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHR 90
             + + G+S+   +  +L+    +
Sbjct: 73 GKALAISGISSAALEAITLLRLERQ 97


>gi|182434535|ref|YP_001822254.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178463051|dbj|BAG17571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 123

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G  V   +G+     ++ +  D+ +A      S   +VDLS +   D+    +++   
Sbjct: 21  ERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQGN 78

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
               G+++L   S  + +L  +I       +
Sbjct: 79  TALGGRLRLAAPSPFMRRLIGMIGLDSALPV 109


>gi|160933633|ref|ZP_02081021.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753]
 gi|156867510|gb|EDO60882.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753]
          Length = 130

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           +++G+      G+       E+   +   I +  +    ++D   +  +D+ G  L+M  
Sbjct: 17  NQDGVLTAALTGDIDHHTARELRLAIDEVIERD-KPGLLLLDFQGVDFMDSSGIGLVMGR 75

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
              M++  G++++  V  +I ++F L        ++ +   +  
Sbjct: 76  YKVMQQNGGEVEVTHVPKYISRVFKLSGLEQLGVMEKKARPQKR 119


>gi|307261765|ref|ZP_07543431.1| hypothetical protein appser12_13240 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868583|gb|EFN00394.1| hypothetical protein appser12_13240 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 117

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 3/83 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66
            + +G      +  +       ++    +     DL  +  +D+ G  L+   +   +  
Sbjct: 20  VKLSGELTRDMLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNYYQKQ 78

Query: 67  GKIKLQGVSTHIEQLFSLISFTH 89
               L  V   ++ L  L   T 
Sbjct: 79  TPNCLIHVPEVVKTLADLFDLTD 101


>gi|148270482|ref|YP_001244942.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1]
 gi|147736026|gb|ABQ47366.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1]
          Length = 110

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++   + R  G   +   SE+ + +   I+ + +    ++DLS+++ +D+ G   ++  +
Sbjct: 11 QDDKAIVRVQGEIDAYNSSELKEQLRSFISTTSK-KKIVLDLSSVSYMDSAGLGTLVVIL 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +      K   +S+  E +  +   TH
Sbjct: 70 KDAKINGKEFILSSLKESILRIFKLTH 96


>gi|154499844|ref|ZP_02037882.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC
           29799]
 gi|150271442|gb|EDM98699.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC
           29799]
          Length = 135

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 30/90 (33%), Gaps = 4/90 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+       +G         +  ++   ++  +      +DLS +T +D+ G  +++   
Sbjct: 42  EDRNLRLTVSGEVDHHGARAVMQELDRQVDAGLP-KRLTLDLSGVTFMDSSGIAVLLRAY 100

Query: 63  EK---YHGKIKLQGVSTHIEQLFSLISFTH 89
            +     G + +  V     ++        
Sbjct: 101 RRMAELGGALTVANVPPQALKVLRAAGLER 130


>gi|254381137|ref|ZP_04996502.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1]
 gi|194340047|gb|EDX21013.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1]
          Length = 109

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 3/90 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+ G T     G         +          ++   +  +DL+ +T ID+ G  +++  
Sbjct: 12 SQPGHTTITLTGELDLDTNPLVTQATD---PIALARHTLTLDLTGVTFIDSTGLTMLLRL 68

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91
           ++ + +     +    +Q  +L   T   
Sbjct: 69 RQRVNTEAGHLELHGARDQALNLFELTGTH 98


>gi|167854681|ref|ZP_02477461.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755]
 gi|167854218|gb|EDS25452.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755]
          Length = 112

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 3/87 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           N   + + +G      +  +       ++          DL  +T ID+ G  L+   + 
Sbjct: 15  NESLMVQLSGELTRDTLLPLWKQRASFLSPK-SLQHIYWDLKGLTSIDSSGFTLLAELLH 73

Query: 64  --KYHGKIKLQGVSTHIEQLFSLISFT 88
             +   K  L  V   +  L  L    
Sbjct: 74  LYQQKNKNCLFNVPQAVHSLAELFDLA 100


>gi|163749279|ref|ZP_02156528.1| SpoIIAA family protein [Shewanella benthica KT99]
 gi|161330998|gb|EDQ01924.1| SpoIIAA family protein [Shewanella benthica KT99]
          Length = 100

 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           +V   +G     ++ ++       ++  I+    ++DLSA++  D+ G   I+  +   
Sbjct: 8  GSVCCISGRLSQGDVVKLWGKRKRLLSAKIK----VIDLSALSYSDSAGIAFILELIALA 63

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
            + ++  +S    QL  LI+ 
Sbjct: 64 KREGRVVTLSAASSQLAKLIAL 85


>gi|325579006|ref|ZP_08148962.1| NTP binding protein, contains STAS domain protein [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159241|gb|EGC71375.1| NTP binding protein, contains STAS domain protein [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 111

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 5/91 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM 62
           N     + +G      +  +       +++ + + S    DL+ I  ID+ G  L+  F+
Sbjct: 12  NDKIALQLSGELSRNTLLPLWQQRASFLSEKLANQSTIEFDLTNIKRIDSAGFALLCDFL 71

Query: 63  EKYHG----KIKLQGVSTHIEQLFSLISFTH 89
                    K++L      +  L  L++ +H
Sbjct: 72  HDSEQLPNKKVRLINPPEQLLTLADLVNLSH 102


>gi|145300161|ref|YP_001143002.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas
          salmonicida subsp. salmonicida A449]
 gi|142852933|gb|ABO91254.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas
          salmonicida subsp. salmonicida A449]
          Length = 108

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          T+ + +G       +E+   +   + +     +  +DLS ++E+D+ G +L++   +   
Sbjct: 12 TLVKISGEMTIYTAAELKQALTPLLYRQ---QALELDLSGVSEMDSAGLQLLLAAKKTMQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
                 +  H   +   +  
Sbjct: 69 QGDSPLHLVMHSHAVLDALEL 89


>gi|238064434|ref|ZP_04609143.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149]
 gi|237886245|gb|EEP75073.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149]
          Length = 135

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 2/88 (2%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +S+    + R  G+      + +  +V   + +       ++D + +  ID+ G  +I++
Sbjct: 21  LSDPDAPLIRVGGDLAFTTAAPLRREVDRQLAERPS--VLVLDFAGLRFIDSTGLSVIVH 78

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFT 88
              +         + +    L +++  T
Sbjct: 79  AWREGQQCDTAIRLRSTPRFLDTILDMT 106


>gi|302864821|ref|YP_003833458.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029]
 gi|302567680|gb|ADL43882.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029]
          Length = 118

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/95 (10%), Positives = 34/95 (35%), Gaps = 2/95 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             + V   AG        ++ D +   ++K    +  + DL+ ++  D+ G  + +    
Sbjct: 11  GDVVVVSVAGELDMATAPQLQDQITDLLDK--GRNRLVFDLAEVSFCDSTGLSVFVRAKN 68

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                  +  ++     +  ++  +   ++ +  P
Sbjct: 69  NCDEAGGVVRLAAPQRGVLRILEVSGLVEVLHTYP 103


>gi|303246824|ref|ZP_07333101.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
 gi|302491841|gb|EFL51721.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
          Length = 110

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V  F+G         + + +   + K+       +DL+ +T ID+ G  L++   ++   
Sbjct: 22  VIAFSGEIDFSVTPAVRERLWELVGKA--GKHIELDLADLTYIDSSGLALLLELRKQLAE 79

Query: 68  KIKLQGVSTHIEQLFSLISFTH 89
             +   + +   Q+  L + T 
Sbjct: 80  ADRTVAIRSISPQVRKLFNLTQ 101


>gi|239931434|ref|ZP_04688387.1| hypothetical protein SghaA1_24659 [Streptomyces ghanaensis ATCC
           14672]
          Length = 210

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    +    G         +A+ +      + + D   +D+S +  +DT G E +    
Sbjct: 8   EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 64

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113
               +    +     +    ++  L        ++   P+ +    +       
Sbjct: 65  DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 118


>gi|209809117|ref|YP_002264655.1| hypothetical protein, putative anti-sigma factor antagonist
           [Aliivibrio salmonicida LFI1238]
 gi|208010679|emb|CAQ81066.1| hypothetical protein, putative anti-sigma factor antagonist
           [Aliivibrio salmonicida LFI1238]
          Length = 105

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S     V    G+  +    +I   +   I +  +     +DL+ +  +D+ G   I+Y 
Sbjct: 8   SNTNTLVLSVQGDMDAVGCRDIQPTIDEVIEQ--EHRQVHIDLAQVAFLDSSGIGAIVYL 65

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
            ++       +++Q       +L  L+   +   + + 
Sbjct: 66  YKRLVEKERTMQIQNAHGQPLELLKLLRIENAIPVNSP 103


>gi|239926897|ref|ZP_04683850.1| putative anti-sigma factor antagonist [Streptomyces ghanaensis ATCC
           14672]
 gi|291435243|ref|ZP_06574633.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291338138|gb|EFE65094.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
          Length = 119

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 6/99 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V   +G         + + V  A          ++DLS +T  D+ G  +++    
Sbjct: 17  SGPYVLEVSGELDHHTAHSLTEAVDEA---PFDDHGVVLDLSGLTYCDSTGITVLITAYR 73

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           +       + L GVS    ++F ++             +
Sbjct: 74  RSQATGSPLSLAGVSPDQMRVFQVVGLDQVFTFHPSTEE 112


>gi|157372589|ref|YP_001480578.1| anti-sigma-factor antagonist [Serratia proteamaculans 568]
 gi|157324353|gb|ABV43450.1| anti-sigma-factor antagonist [Serratia proteamaculans 568]
          Length = 99

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  + +     +     +D  ++D++ +  +D+ G  L+++  E+   
Sbjct: 12 TLILRGELDRETLLPLWEQRETLL-----ADITVLDVTQLQRVDSSGLALLVHLREQQRQ 66

Query: 68 KIKLQGVSTHIEQLFSLISF 87
                +S   ++L +LI+ 
Sbjct: 67 HGVELKISGASDRLKTLITL 86


>gi|315501106|ref|YP_004079993.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
 gi|315407725|gb|ADU05842.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
          Length = 118

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
              + V   AG        ++ D +   ++K       + DL+ ++  D+ G  + +   
Sbjct: 10  RGDVVVVSVAGELDMATAPQLQDQITDLLDK--GRSRLVFDLAEVSFCDSTGLSVFVRAK 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                   +  ++     +  ++  +   ++ +  P
Sbjct: 68  NNCDEAGGVVRLAAPQRGVLRILEVSGLVEVLHTYP 103


>gi|330954309|gb|EGH54569.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae Cit 7]
          Length = 96

 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S N     +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+   
Sbjct: 7  STNDTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVI 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +      
Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFEL 89


>gi|83589261|ref|YP_429270.1| anti-sigma-factor antagonist domain-containing protein [Moorella
          thermoacetica ATCC 39073]
 gi|83572175|gb|ABC18727.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella
          thermoacetica ATCC 39073]
          Length = 109

 Score = 45.4 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E   +V R AG      I+++  ++         +    +D SA+  +D+ GA L++   
Sbjct: 11 EKDRSVLRVAGELDFSNINQLQQEIERQ-----DTKIVEIDCSALQFMDSSGAGLLLSIA 65

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
             + + ++  ++   E ++  +   
Sbjct: 66 RVLNLQNRILEITHIPEHIYHDLDII 91


>gi|15677792|ref|NP_274956.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58]
 gi|7227222|gb|AAF42291.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58]
 gi|254670839|emb|CBA07268.1| STAS domain protein [Neisseria meningitidis alpha153]
 gi|308390060|gb|ADO32380.1| hypothetical protein NMBB_2245 [Neisseria meningitidis alpha710]
 gi|316985590|gb|EFV64537.1| hypothetical protein NMH_0136 [Neisseria meningitidis H44/76]
 gi|325127425|gb|EGC50356.1| hypothetical protein NMXN1568_1823 [Neisseria meningitidis N1568]
 gi|325139612|gb|EGC62152.1| hypothetical protein NMBCU385_2035 [Neisseria meningitidis CU385]
 gi|325201010|gb|ADY96465.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 92

 Score = 45.4 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  ILHIGGDITVKTLT--AAAFTRFRQQCRLKDTCAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|293394227|ref|ZP_06638527.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582]
 gi|291423205|gb|EFE96434.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582]
          Length = 100

 Score = 45.4 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     +  +       +     +    VD++ +  +D+ G  L+++   +   
Sbjct: 13 TLVLSGDLDRETLLPLWQQRETLL-----AGKTAVDVAQLQRVDSSGLALLVHLRAQQQR 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +    ++L +LI+ 
Sbjct: 68 QGVELQIIGATDRLKTLITL 87


>gi|119469176|ref|ZP_01612160.1| putative anti-sigma B factor antagonist [Alteromonadales
          bacterium TW-7]
 gi|119447428|gb|EAW28696.1| putative anti-sigma B factor antagonist [Alteromonadales
          bacterium TW-7]
          Length = 97

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59
          +S+     FR +G      I +    +   +    +  +   DLS ++ +DT G A LI 
Sbjct: 6  ISQIDDQQFRASGELSRNSIGD-EQLLNKQL--QTKHKTIYFDLSGVSRVDTAGLAWLIH 62

Query: 60 YF--MEKYHGKIKLQGVSTHIEQLFSL 84
           F  +++   +++LQ     ++ L  L
Sbjct: 63 SFAELKQQGIRLELQNPPEQLQNLMQL 89


>gi|66044042|ref|YP_233883.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae B728a]
 gi|63254749|gb|AAY35845.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae B728a]
 gi|330971850|gb|EGH71916.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. aceris str. M302273PT]
          Length = 96

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S N     +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+   
Sbjct: 7  SANDTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVI 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +      
Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFEL 89


>gi|116747919|ref|YP_844606.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB]
 gi|116696983|gb|ABK16171.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB]
          Length = 120

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 32/107 (29%), Gaps = 4/107 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
             V    G      +  I   ++  +          +DL+ +  +DT G  +++  +   
Sbjct: 11  RPVVELGGVLDRESVPGIRKVLLRLVKAK-GIKDLRIDLAEVERMDTSGVAMLVEVLRVL 69

Query: 64  -KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
               GK+ L   S    ++  L       +     P  +      + 
Sbjct: 70  SARKGKVHLTNPSEPATRMIRLARLNGVFEQGASGPLAASGAGPQRR 116


>gi|326794030|ref|YP_004311850.1| sulfate transporter/antisigma-factor antagonist STAS [Marinomonas
           mediterranea MMB-1]
 gi|326544794|gb|ADZ90014.1| Sulfate transporter/antisigma-factor antagonist STAS [Marinomonas
           mediterranea MMB-1]
          Length = 109

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 5/97 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   AG      I+E  D +   +  +      + DLS +T ID+ G   I++  ++   
Sbjct: 13  VLELAGEMDCVAIAENKDAIE--LIPTTFDGDIVFDLSKVTFIDSSGIGAIVFLFKRLRE 70

Query: 68  KIK---LQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           + +   L G++   ++L +L+       IK+     +
Sbjct: 71  EERSLVLSGLNGQPKELMTLLRIDRAITIKDDVRSCA 107


>gi|271968053|ref|YP_003342249.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021]
 gi|270511228|gb|ACZ89506.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021]
          Length = 123

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFM 62
           + V   +G+       ++  D+  A+  +      ++DL+ +   D+ G      I   +
Sbjct: 20  VPVIALSGDLDFTNAEQLRADIQAAL--TPDHRDLVLDLTGLDFCDSTGIRIFLAIRKLL 77

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           ++  G + L G+++ + ++F L    H   ++           S
Sbjct: 78  QERGGAVALTGLNSRLTRIFRLTGLVHAFTVQPTAADAVTLLRS 121


>gi|328880418|emb|CCA53657.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor
          antagonist RsbV [Streptomyces venezuelae ATCC 10712]
          Length = 122

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V   AG         +AD +   + +       ++DLSA+  +D+ G  +++  + + 
Sbjct: 19 TAVLSVAGELDMDTAGRLADHLAEQLGEGRHH--LVLDLSALGFMDSSGLNVLIRSVHRA 76

Query: 66 HGKIKLQGVSTHIEQLFSLIS 86
                  ++     +  ++ 
Sbjct: 77 REAGGDLYLAAPNPAVRRILE 97


>gi|283853373|ref|ZP_06370620.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
 gi|283571241|gb|EFC19254.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
          Length = 258

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           E+G T+ R AG+  +    E+   +   +  +      ++DLS +  ID++G  L++   
Sbjct: 164 EDGQTILRPAGDIVASVTDELRTRLKEIMQGNP--GPLVIDLSRVELIDSVGIGLLIAAH 221

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
             + K  G++ L+ V+  +  L   +       ++N
Sbjct: 222 NTLSKKGGRLTLRHVNPDLASLLRTMRLDKHFAVEN 257


>gi|126175853|ref|YP_001052002.1| SpoIIAA family protein [Shewanella baltica OS155]
 gi|152999235|ref|YP_001364916.1| SpoIIAA family protein [Shewanella baltica OS185]
 gi|160873848|ref|YP_001553164.1| SpoIIAA family protein [Shewanella baltica OS195]
 gi|217971908|ref|YP_002356659.1| SpoIIAA family protein [Shewanella baltica OS223]
 gi|125999058|gb|ABN63133.1| SpoIIAA family protein [Shewanella baltica OS155]
 gi|151363853|gb|ABS06853.1| SpoIIAA family protein [Shewanella baltica OS185]
 gi|160859370|gb|ABX47904.1| SpoIIAA family protein [Shewanella baltica OS195]
 gi|217497043|gb|ACK45236.1| SpoIIAA family protein [Shewanella baltica OS223]
 gi|315266075|gb|ADT92928.1| SpoIIAA family protein [Shewanella baltica OS678]
          Length = 94

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           TV    G     ++  +       + +S Q    I+ LS +   D+ G   ++  + ++
Sbjct: 8  GTVCHLKGRITQADVITLWPQRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVREH 63

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
            +++L   S  +++L  L    
Sbjct: 64 GSQLELSSASPQLKKLIDLYDLH 86


>gi|260428392|ref|ZP_05782371.1| membrane protein [Citreicella sp. SE45]
 gi|260422884|gb|EEX16135.1| membrane protein [Citreicella sp. SE45]
          Length = 83

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 32/83 (38%)

Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194
           +        +  ++   +    +  +  +G   +PVV + +  TG  +A Q     ++F 
Sbjct: 1   MAIFAARAASHIFRAPFYGREALNALLQIGWLSLPVVGMTALFTGGALALQIYSGGARFS 60

Query: 195 AEIFSIDLMSILQLREIGVLLTA 217
           AE     +++I  +R+       
Sbjct: 61  AEAVVPQIVAIGMVRDWARCWWG 83


>gi|168463465|ref|ZP_02697382.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|195633593|gb|EDX52007.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
          Length = 98

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              AG      ++ + D  V A      +    +DLS I+ +DT G  L+ + + +   
Sbjct: 13 TLVLAGELDQDVLAPLWDARVEA-----TTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +S   +++++L   
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|304411201|ref|ZP_07392816.1| SpoIIAA family protein [Shewanella baltica OS183]
 gi|307306496|ref|ZP_07586239.1| SpoIIAA family protein [Shewanella baltica BA175]
 gi|304350394|gb|EFM14797.1| SpoIIAA family protein [Shewanella baltica OS183]
 gi|306910787|gb|EFN41215.1| SpoIIAA family protein [Shewanella baltica BA175]
          Length = 94

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           TV    G     ++  +       + +S Q    I+ LS +   D+ G   ++  + ++
Sbjct: 8  GTVCHLKGRITQADVITLWPRRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVREH 63

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
            +++L   S  +++L  L    
Sbjct: 64 GSQLELSSASPQLKKLIDLYDLH 86


>gi|167628450|ref|YP_001678949.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum
          Ice1]
 gi|167591190|gb|ABZ82938.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum
          Ice1]
          Length = 115

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
              V R  G         +   +   I +  ++   + +L  +  ID+ G   I+    
Sbjct: 7  GNALVVRLQGEIDLCAAEALRPRLDKEIERQ-KAKHLVFNLRGVDFIDSSGIGFILGRYK 65

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           ++   GK+ L G +  + ++  L
Sbjct: 66 RVKALGGKVALAGPTRSVHRIIEL 89


>gi|108800291|ref|YP_640488.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119869419|ref|YP_939371.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
 gi|126435914|ref|YP_001071605.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
 gi|108770710|gb|ABG09432.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119695508|gb|ABL92581.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
 gi|126235714|gb|ABN99114.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
          Length = 126

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 33/111 (29%), Gaps = 3/111 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAELI 58
           + +     R AG   +   SE  D     +  +    +  +D + +T  D+    G  LI
Sbjct: 9   AADRSATVRIAGELDAETTSEFVDTASRLLETNPGLRALRLDCADMTFCDSAGLSGLLLI 68

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
                     + L    T+ E++  +         +      +       +
Sbjct: 69  ERRTTAAGVDLHLDNRPTYFERVLDITGILEYIAGRRATSAPAPTEEPDGD 119


>gi|118581090|ref|YP_902340.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379]
 gi|118503800|gb|ABL00283.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379]
          Length = 130

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIM 59
           +S +G T     G+W    +    + +       S  ++   +D + I  ID  G +++ 
Sbjct: 2   VSYDGRTRVTLWGHWDLSSVIRQIELLSALRQLGSGGAERYSIDCAGIGSIDREGLQVLH 61

Query: 60  YFM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
            +M     +  K +L  +   + +    +           +P R    +        +G+
Sbjct: 62  VWMQCARLHGLKPELSNLPAGMLETIQRLGLERCFADFYAEPAREMPKDEILAYFSPLGE 121


>gi|300702842|ref|YP_003744443.1| hypothetical protein RCFBP_10493 [Ralstonia solanacearum CFBP2957]
 gi|299070504|emb|CBJ41799.1| conserved protein of unknown function, STAS domain [Ralstonia
           solanacearum CFBP2957]
          Length = 104

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
              +G     E   I  +    ++++ Q+   +  VD + +++ID+    +++ +     
Sbjct: 2   LTLSGPLTHREAPRILREGEAQLSQASQAGTMAVRVDCAGLSQIDSSALAVLLSWQRTAQ 61

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                  ++   E L +L +      +    P  +  ++ 
Sbjct: 62  AAGIALDIAAAPEALRNLATLYGVDALLAVAPATTASHHP 101


>gi|300785987|ref|YP_003766278.1| fused protein kinase and phosphatase containing multi-sensor domain
           [Amycolatopsis mediterranei U32]
 gi|299795501|gb|ADJ45876.1| fused protein kinase and phosphatase containing multi-sensor domain
           [Amycolatopsis mediterranei U32]
          Length = 899

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    +  G+     I E+   V+ ++  +    S +VDL+ +  + + G  L++     
Sbjct: 799 GPLALKLTGDLDLATIGEVRPAVLASVEATAT-RSVVVDLTGLRYLSSCGVALLLDVAAV 857

Query: 65  YHGKIKLQGVSTHIE 79
              +           
Sbjct: 858 ARRRGLAVTTRASAA 872


>gi|53804224|ref|YP_113888.1| anti-anti-sigma factor family protein [Methylococcus capsulatus
          str. Bath]
 gi|53757985|gb|AAU92276.1| anti-anti-sigma factor family protein [Methylococcus capsulatus
          str. Bath]
          Length = 114

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +++ + +    G     + ++   +++  + +   +   +VDLS +  +D+ G  +++  
Sbjct: 7  TQDNVDIVELGGRLVMADAAQARSELLAVVRR--GTGRLVVDLSDVGFVDSSGLSVLIAA 64

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
             +E+  GK+ L G+S  I+ L  L     
Sbjct: 65 FKAIEERSGKMVLAGLSPEIQALLELTRLNE 95


>gi|330810306|ref|YP_004354768.1| hypothetical protein PSEBR_a3440 [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327378414|gb|AEA69764.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
          Length = 94

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + +        G       +++A   +  +  + +     +DLS ITE+D  G +L++  
Sbjct: 7  THDDTAQVHIDGELTIYTAADLAAQWLPHLGATPR---MALDLSQITEMDGAGLQLLLMV 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +   ++ 
Sbjct: 64 QREAAKAGTQLTLTGQSKAVTETLAL 89


>gi|256392581|ref|YP_003114145.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256358807|gb|ACU72304.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 115

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V   AG+      +    +V  A      S   ++D S IT +D++G  ++++  ++
Sbjct: 12  GRVVLAVAGDVDLAAHTRFEAEVEQA---WDGSTDLVIDCSGITFLDSMGLRVLVHTKQR 68

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
                    ++   + +  ++     + +  +    S    
Sbjct: 69  ADETGHSVVLAAPSDPVLRVLDLAGIRSLFPEVDPVSDAEP 109


>gi|15639529|ref|NP_218979.1| anti-sigma F factor antagonist (SpoIIAA-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189025768|ref|YP_001933540.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum
           SS14]
 gi|3322830|gb|AAC65524.1| anti-sigma F factor antagonist (spoIIAA-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018343|gb|ACD70961.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum
           SS14]
          Length = 123

 Score = 45.0 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             GI V   +G+       ++ D V+   ++       ++DL A+  ID+ G  +++Y  
Sbjct: 10  SGGICVVDISGDMDLYHSYKLKDLVLKLFDRGP--RCIVIDLEAVEYIDSSGIGVLIYLC 67

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
              +K      + GV   ++++  L    +   I     +      S
Sbjct: 68  STVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 114


>gi|269126863|ref|YP_003300233.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268311821|gb|ACY98195.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 106

 Score = 45.0 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +        G+       E+ + +   +         +VDL+A+   D+ G  +++   +
Sbjct: 11 DDRVTVTVRGSIDLHSSDELRERLKSLVEA--GHRQIVVDLAAVDFCDSSGLNVLVRTYK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
          +   +  +  V+    ++ +++  T
Sbjct: 69 QAREQGGVLTVTGAYGRVENVLRTT 93


>gi|16762071|ref|NP_457688.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Typhi str. CT18]
 gi|16766604|ref|NP_462219.1| hypothetical protein STM3309 [Salmonella enterica subsp. enterica
          serovar Typhimurium str. LT2]
 gi|29143560|ref|NP_806902.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Typhi str. Ty2]
 gi|161616319|ref|YP_001590284.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|167552041|ref|ZP_02345794.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|167994502|ref|ZP_02575593.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168238011|ref|ZP_02663069.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|168243145|ref|ZP_02668077.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|168262678|ref|ZP_02684651.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|194445872|ref|YP_002042567.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194450078|ref|YP_002047338.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194738002|ref|YP_002116259.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|197249208|ref|YP_002148234.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197262522|ref|ZP_03162596.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|200386608|ref|ZP_03213220.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|213024118|ref|ZP_03338565.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
 gi|213053029|ref|ZP_03345907.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E00-7866]
 gi|213419092|ref|ZP_03352158.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
 gi|213426648|ref|ZP_03359398.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E02-1180]
 gi|213584874|ref|ZP_03366700.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-0664]
 gi|213646984|ref|ZP_03377037.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. J185]
 gi|289825819|ref|ZP_06544987.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-3139]
 gi|25512337|pir||AD0904 probable anti-sigma factor antagonist [imported] - Salmonella
          enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421866|gb|AAL22178.1| putative STAS domain protein [Salmonella enterica subsp. enterica
          serovar Typhimurium str. LT2]
 gi|16504374|emb|CAD07826.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi]
 gi|29139195|gb|AAO70762.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|161365683|gb|ABX69451.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|194404535|gb|ACF64757.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194408382|gb|ACF68601.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194713504|gb|ACF92725.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|197212911|gb|ACH50308.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197240777|gb|EDY23397.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|197289068|gb|EDY28437.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|199603706|gb|EDZ02251.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|205323215|gb|EDZ11054.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|205327642|gb|EDZ14406.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337858|gb|EDZ24622.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|205348546|gb|EDZ35177.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|261248474|emb|CBG26311.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhimurium str. D23580]
 gi|267995508|gb|ACY90393.1| hypothetical protein STM14_3997 [Salmonella enterica subsp.
          enterica serovar Typhimurium str. 14028S]
 gi|301159858|emb|CBW19377.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhimurium str. SL1344]
 gi|312914336|dbj|BAJ38310.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhimurium str. T000240]
 gi|321225267|gb|EFX50326.1| hypothetical protein YrbB [Salmonella enterica subsp. enterica
          serovar Typhimurium str. TN061786]
 gi|323131669|gb|ADX19099.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Typhimurium str. 4/74]
          Length = 98

 Score = 45.0 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              AG      ++ + D  V A+N         +DLS I+ +DT G  L+ + + +   
Sbjct: 13 TLVLAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +S   +++++L   
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|238062147|ref|ZP_04606856.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149]
 gi|237883958|gb|EEP72786.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149]
          Length = 118

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
              + V   AG        ++ D +   ++K       + DL+ ++  D+ G  + +   
Sbjct: 10  RGDVVVVSVAGELDMATAPQLQDQITDLLDK--GRSRLVFDLTEVSFCDSTGLSVFVRAK 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                   +  ++     +  ++  +   ++ +  P
Sbjct: 68  NSCDEAGGVVRLAAPQRGVLRILEVSGLVEVLHTYP 103


>gi|117923942|ref|YP_864559.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1]
 gi|117607698|gb|ABK43153.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1]
          Length = 105

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E      +  G+    + +E+ +  V A+      DS +++LS +T ID  G +++    
Sbjct: 7  EGSSARLQLTGDLTIQQAAELKESCVQAVQS---GDSLVLNLSGVTRIDLAGLQILCAMH 63

Query: 63 EKYHGKIKLQGVSTHIEQ 80
               + K   +   I +
Sbjct: 64 RALVDEGKSLTLQGEIPK 81


>gi|291059916|gb|ADD72651.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 121

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             GI V   +G+       ++ D V+   ++       ++DL A+  ID+ G  +++Y  
Sbjct: 8   SGGICVVDISGDMDLYHSYKLKDLVLKLFDRGP--RCIVIDLEAVEYIDSSGIGVLIYLC 65

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
              +K      + GV   ++++  L    +   I     +      S
Sbjct: 66  STVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 112


>gi|145595097|ref|YP_001159394.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora
           tropica CNB-440]
 gi|145304434|gb|ABP55016.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora
           tropica CNB-440]
          Length = 176

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 3/96 (3%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75
            +     +   +  AI         +VDLSA+ +ID++G  L++   ++   +     + 
Sbjct: 84  TAATPDPLRTALDEAIE---HEGRVVVDLSAVEQIDSVGLGLLVRARQEARQRGAELCLH 140

Query: 76  THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
                + +++                   N  K L 
Sbjct: 141 APSRFVLTVLHTMRLDAAFPVVTDHPDATNQPKVLV 176


>gi|315506297|ref|YP_004085184.1| sulfate transporter/antisigma-factor antagonist stas
           [Micromonospora sp. L5]
 gi|315412916|gb|ADU11033.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora sp. L5]
          Length = 123

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R AG        E+ D V  A  +        +D + +   D+ G   ++     
Sbjct: 24  GSARVRLAGELDFDTAPELVDAV--AGLRRDGHQELELDFAGVDLCDSSGLSALVVIHRA 81

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
             G I+L  ++  I  L              Q+
Sbjct: 82  GTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114


>gi|33151496|ref|NP_872849.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi
          35000HP]
 gi|33147716|gb|AAP95238.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi
          35000HP]
          Length = 113

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +NG       G      +  +      +   +  +++   DL+ +  ID+ G  L++  +
Sbjct: 14 QNGSLFVTLLGELTRDTLLPLWKQ-RASFLSNPHNETIYWDLNHLLRIDSAGFALLIELL 72

Query: 63 E 63
           
Sbjct: 73 N 73


>gi|119776209|ref|YP_928949.1| SpoIIAA family protein [Shewanella amazonensis SB2B]
 gi|119768709|gb|ABM01280.1| SpoIIAA family protein [Shewanella amazonensis SB2B]
          Length = 96

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                AG   +  + ++  +V   +     +D++ +DL  ++  D+ G   ++   ++ 
Sbjct: 8  GNTLSVAGRLDAAVVKQLWPEVATLV----PADTSCLDLRQLSYSDSAGVAFLLELWQRA 63

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
          H + +   + +   QL  LI+ 
Sbjct: 64 HSRGQSITLMSPSPQLGKLIAL 85


>gi|156741105|ref|YP_001431234.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941]
 gi|156232433|gb|ABU57216.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941]
          Length = 117

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           ++GIT+ R  G       +++   +   +         I DL  ++ +D+ G   ++   
Sbjct: 9   DDGITIVRMDGRLDLVTAAQVKQQLTELVAS--GHRRLIFDLDRVSFVDSSGLGALISGL 66

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
               +  G +++   +  +  L +L       + 
Sbjct: 67  KVARQAGGDLRIARANQQVRTLLNLTMLERVLRP 100


>gi|271961736|ref|YP_003335932.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM
          43021]
 gi|270504911|gb|ACZ83189.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM
          43021]
          Length = 117

 Score = 44.6 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 32/85 (37%), Gaps = 1/85 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S  G TV    G         +  +    + +S  +   ++D+S +   D+ G  +++  
Sbjct: 9  SHAGHTVMTIVGEIDLYTAPGLQSEFTRLLQESPTT-YVVIDMSGVEFCDSTGMNVLLSA 67

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
          +++   +     ++     +  ++ 
Sbjct: 68 LKRLKERGGTLELAAPRPAVRKILQ 92


>gi|312961185|ref|ZP_07775690.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
           fluorescens WH6]
 gi|311284843|gb|EFQ63419.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
           fluorescens WH6]
          Length = 112

 Score = 44.6 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 3/98 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            GI      G      ++E+A ++   + +   +    +DLS +TEID  G +L+     
Sbjct: 9   EGIARVGIEGELTIYTVAELAAEL---LPQLGTAPRLELDLSQVTEIDGAGLQLLAVIHR 65

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           +         +    + +   +            P + 
Sbjct: 66  EAAAGGTPVSLVGQSQAVTQTLQLCAALSFSAPYPDQR 103


>gi|182440614|ref|YP_001828333.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178469130|dbj|BAG23650.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 136

 Score = 44.6 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 26/85 (30%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G       G+        + ++V   +          +  + +  +D+ G   ++    
Sbjct: 16  EGSIRIGLQGDLDYDSADHLLNEVTAHLAARPALTDLHLHCAELDTVDSTGLSALLMISR 75

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFT 88
           +  G      +    E+L  L+  T
Sbjct: 76  RTSGAGVRLHLDARPERLDRLLHLT 100


>gi|325131368|gb|EGC54077.1| hypothetical protein NMBM6190_1870 [Neisseria meningitidis M6190]
 gi|325133420|gb|EGC56084.1| hypothetical protein NMBM13399_1939 [Neisseria meningitidis
          M13399]
 gi|325137486|gb|EGC60071.1| hypothetical protein NMBES14902_1850 [Neisseria meningitidis
          ES14902]
 gi|325141488|gb|EGC63961.1| hypothetical protein NMB9615945_1901 [Neisseria meningitidis
          961-5945]
 gi|325199051|gb|ADY94507.1| conserved hypothetical protein [Neisseria meningitidis G2136]
 gi|325206867|gb|ADZ02320.1| conserved hypothetical protein [Neisseria meningitidis
          M04-240196]
          Length = 92

 Score = 44.6 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++   +       +    ++  VD   +   D+    L++  +    G
Sbjct: 9  TLHISGDITVKTLTG--EAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|117620668|ref|YP_855579.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp.
          hydrophila ATCC 7966]
 gi|117562075|gb|ABK39023.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp.
          hydrophila ATCC 7966]
          Length = 108

 Score = 44.6 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TV   AG       +E+   +   + +        +DLS ++E+D+ G +L++   +   
Sbjct: 12 TVVTIAGEMTIYTAAELKQALTPLLYRQ---QELELDLSQVSEMDSAGLQLLLAAKKTAL 68

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
                 +  H   +   +  
Sbjct: 69 QGGYPLHLVMHSHAVLDALEL 89


>gi|326318249|ref|YP_004235921.1| sulfate transporter/antisigma-factor antagonist STAS [Acidovorax
          avenae subsp. avenae ATCC 19860]
 gi|323375085|gb|ADX47354.1| Sulfate transporter/antisigma-factor antagonist STAS [Acidovorax
          avenae subsp. avenae ATCC 19860]
          Length = 105

 Score = 44.6 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          IT     G       +E    ++ A++ S +     +DL+ +TEID+ G +L+M      
Sbjct: 4  ITTLALDGELTIYRAAETRTGLLAALSDSPEG--LEIDLAGVTEIDSAGVQLLMAARRDA 61

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
            + +    +     +  +++   
Sbjct: 62 QARGQWLRFTGCNAPVSEVLALFD 85


>gi|254507964|ref|ZP_05120092.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16]
 gi|219549072|gb|EED26069.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16]
          Length = 106

 Score = 44.6 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + + +      GN  +   S  A   +  I          +D S +  +D+ G   I+Y 
Sbjct: 8   ASDTVLTLVINGNLDAAG-SRSAQPHIDEIIADKSDREIEIDFSQVQFLDSSGVGAIVYL 66

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
            ++       ++L+ VS    ++ +L+       + + K
Sbjct: 67  YKRLIERQRGMRLENVSGQPLEIMNLLRIDQAIPVNSSK 105


>gi|319409729|emb|CBY90035.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
          Length = 92

 Score = 44.6 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G+     ++  A        +    D+  VDLS +   D+    L++  +    G
Sbjct: 9  ILHIGGDITVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|315179035|gb|ADT85949.1| anti-sigma B factor antagonist, hypothetical [Vibrio furnissii NCTC
           11218]
          Length = 109

 Score = 44.6 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  +   +G      + E+   +        Q+    + L ++T ID+ G  ++++ +E 
Sbjct: 10  GPALAALSGPLDRDTVPELWAVLQQW---QPQNAECELSLKSVTRIDSAGMVMLIHLLEH 66

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
              +     +S   EQL +L   ++   + +Q  ++    N
Sbjct: 67  AKKQNCHIMLSFVPEQLRTLFQLSNIDAMMSQHIKQPAGVN 107


>gi|300787020|ref|YP_003767311.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299796534|gb|ADJ46909.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 114

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/86 (11%), Positives = 25/86 (29%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E G      AG+ +      +   V   +          +D   +   D+     ++  +
Sbjct: 13 EEGTARVTIAGDLEFATTGTLLRLVTDRLAACPGVREVRLDCGELGFCDSSELLKVLRVV 72

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
               +++L       E+L +     
Sbjct: 73 ADAGARLRLDHRRAAPERLLTRTGTA 98


>gi|217969737|ref|YP_002354971.1| anti-sigma-factor antagonist [Thauera sp. MZ1T]
 gi|217507064|gb|ACK54075.1| anti-sigma-factor antagonist [Thauera sp. MZ1T]
          Length = 111

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G+      G      ++ + +  + A+      ++  +DL  I EIDT G +L++     
Sbjct: 12 GVARLAPEGELGIYTVAALREAWLQALA---THEALEIDLGRIDEIDTAGLQLMLMAKRS 68

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
              ++    S  + +L  L   
Sbjct: 69 VGRSVRFVNHSAAVLRLLDLARL 91


>gi|121635617|ref|YP_975862.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18]
 gi|120867323|emb|CAM11094.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18]
 gi|325143671|gb|EGC65990.1| hypothetical protein NMBM01240013_1912 [Neisseria meningitidis
          M01-240013]
          Length = 100

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++   +       +    ++  VD   +   D+    L++  +    G
Sbjct: 17 TLHISGDITVKTLTG--EAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 74

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 75 SVRLTGIPESVRALSELYE 93


>gi|21233628|ref|NP_639545.1| hypothetical protein XCC4211 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770593|ref|YP_245355.1| hypothetical protein XC_4300 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115497|gb|AAM43427.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575925|gb|AAY51335.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 102

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               +G      ++++    +  +     + +  +DLS +  +D+ G  ++     +   
Sbjct: 18  TLAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAELAARLRS 72

Query: 67  -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
            G   + G ++ +++L +    +     +
Sbjct: 73  NGNGTVVGKASGLDELCAAYRLSPSLDFQ 101


>gi|213970197|ref|ZP_03398328.1| STAS domain protein [Pseudomonas syringae pv. tomato T1]
 gi|302060004|ref|ZP_07251545.1| STAS domain protein [Pseudomonas syringae pv. tomato K40]
 gi|302130894|ref|ZP_07256884.1| STAS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925078|gb|EEB58642.1| STAS domain protein [Pseudomonas syringae pv. tomato T1]
          Length = 96

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + I   +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+    
Sbjct: 8  RDDIAHMQIDGELTIYTVTELAARL---LPQIAGAARVEVDLSHVTEMDGAGLQLLAVIQ 64

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
           +         ++   + +      
Sbjct: 65 REAGKTGTALHLTGQSQAVTETFEL 89


>gi|294139197|ref|YP_003555175.1| SpoIIAA family protein [Shewanella violacea DSS12]
 gi|293325666|dbj|BAJ00397.1| SpoIIAA family protein [Shewanella violacea DSS12]
          Length = 100

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +V   +G     ++ ++       ++ +I+    ++DLSA+T  D+ G   I+  +    
Sbjct: 9   SVCCISGRLSQGDVVKLWGKRKRLLSDNIK----VIDLSALTYSDSAGIAFILELIALSK 64

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
            + +   +S+   QL  LI     +   +++ ++ 
Sbjct: 65  QQGREITLSSASSQLSKLIGLYDLEHFFDEEVKKG 99


>gi|225174856|ref|ZP_03728853.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1]
 gi|225169496|gb|EEG78293.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1]
          Length = 111

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
               V R  G      +  I D +   +       + + + S +  +D+ G  +++    
Sbjct: 9   GNTLVVRMTGELDHHAVDGIRDRLDRKLAVE-HIKNVVFNFSGVQFMDSSGLGMVLGRYK 67

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
            + +  GK+    +S  + ++F L     R  +   + +
Sbjct: 68  LISEKGGKVLACSLSPRVSRVFDLAGLQSRIPVFASEAE 106


>gi|78355071|ref|YP_386520.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio
          desulfuricans subsp. desulfuricans str. G20]
 gi|78217476|gb|ABB36825.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio
          desulfuricans subsp. desulfuricans str. G20]
          Length = 105

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +S+NG  +    G       +++   +   I  S    + ++D+  ++ ID+ G  L++ 
Sbjct: 8  ISDNGALILE--GEIDYSVAAQVRTALHRHIESS--GGAVVLDMEKVSYIDSTGLALLIE 63

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
             K   + +   +S    ++  L   T    I
Sbjct: 64 LRRKLQEQSREIRISAASVRVRQLFELTQIAPI 96


>gi|307718375|ref|YP_003873907.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192]
 gi|306532100|gb|ADN01634.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192]
          Length = 130

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 5/110 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
           +   +G     +   I D +     +       + DL  +T ID+ G   ++Y     ++
Sbjct: 13  ILSLSGELDLYQAPRIKDMLQKVFPEHPA--RIVFDLDGLTYIDSSGIGALLYAYSEAKR 70

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
                 L  +   ++++  L    H   I     +      S  +    +
Sbjct: 71  RDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120


>gi|256379100|ref|YP_003102760.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255923403|gb|ACU38914.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 108

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                V    G   +  +  ++D +         +   +VDL+ +T +DT G  L++ + 
Sbjct: 10  RGDWKVVVVTGELDADTVPVLSDHLEE-----TPARRIVVDLAGVTFMDTTGLSLVLDWH 64

Query: 63  EKY----HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
            +      G  +L  +   + +LF L       +I 
Sbjct: 65  RRLVDTGAGDFRLASLQPSVHKLFRLTELVDVMRIH 100


>gi|238756120|ref|ZP_04617441.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473]
 gi|238705659|gb|EEP98055.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473]
          Length = 100

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G+     +  +       +     +D   +D++ +  +D+ G  L+++  E+ H
Sbjct: 12 HTLLLIGDLDRETLMPLWQQRETLL-----ADKTCLDVAQLQRVDSSGLALLVHLREEQH 66

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
           +     +S   ++L +LI+ 
Sbjct: 67 QRGSDLIISGVSDRLATLITL 87


>gi|220904524|ref|YP_002479836.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
 gi|219868823|gb|ACL49158.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
          Length = 117

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S   +TV R+ G+   P++ + +  +   +         ++DLS +  +DT G  +++  
Sbjct: 8  SHKNVTVLRYLGDMLLPDVPQFSRQLEAYLLA-PGIRQVVLDLSHVNRVDTSGLGVLVSA 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTH 89
            K  G  +   + T    +  L+    
Sbjct: 67 STKSRGHGRRLVLLTPAPHVVELLKKVE 94


>gi|209694104|ref|YP_002262032.1| conserved hypothetical protein containing [Aliivibrio salmonicida
          LFI1238]
 gi|208008055|emb|CAQ78194.1| conserved hypothetical protein containing [Aliivibrio salmonicida
          LFI1238]
          Length = 106

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            F G      +  + + +        + +   VDL+ +  ID+ G  L+++ +E    +
Sbjct: 14 ISFKGTLDRETVPNLWNKLTEW---KPKLEQVKVDLTHVNRIDSAGVVLLLHLIEHAKKQ 70

Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93
               ++   +QL +LI  ++ + +
Sbjct: 71 NCHIMLAFVPDQLITLIQLSNVESL 95


>gi|62181817|ref|YP_218234.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. SC-B67]
 gi|168231920|ref|ZP_02656978.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Kentucky str. CDC 191]
 gi|168819621|ref|ZP_02831621.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Weltevreden str. HI_N05-537]
 gi|194470672|ref|ZP_03076656.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|198244440|ref|YP_002217280.1| hypothetical protein SeD_A3668 [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|204931203|ref|ZP_03221997.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
 gi|205354210|ref|YP_002228011.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Gallinarum str. 287/91]
 gi|207858557|ref|YP_002245208.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Enteritidis str. P125109]
 gi|224585106|ref|YP_002638905.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Paratyphi C strain RKS4594]
 gi|238910103|ref|ZP_04653940.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Tennessee str. CDC07-0191]
 gi|62129450|gb|AAX67153.1| putative STAS domain [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. SC-B67]
 gi|194457036|gb|EDX45875.1| conserved hypothetical protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|197938956|gb|ACH76289.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Dublin str. CT_02021853]
 gi|204319970|gb|EDZ05176.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
 gi|205273991|emb|CAR38997.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 287/91]
 gi|205333847|gb|EDZ20611.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Kentucky str. CDC 191]
 gi|205343356|gb|EDZ30120.1| putative stas domain protein [Salmonella enterica subsp. enterica
          serovar Weltevreden str. HI_N05-537]
 gi|206710360|emb|CAR34718.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Enteritidis str. P125109]
 gi|224469634|gb|ACN47464.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|320087754|emb|CBY97518.1| Uncharacterized protein yrbB [Salmonella enterica subsp. enterica
          serovar Weltevreden str. 2007-60-3289-1]
 gi|322615313|gb|EFY12234.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Montevideo str. 315996572]
 gi|322618328|gb|EFY15219.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-1]
 gi|322622867|gb|EFY19711.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-3]
 gi|322626811|gb|EFY23608.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-4]
 gi|322631380|gb|EFY28140.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-1]
 gi|322635353|gb|EFY32067.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-2]
 gi|322643352|gb|EFY39916.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 531954]
 gi|322647076|gb|EFY43577.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648879|gb|EFY45324.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. OH_2009072675]
 gi|322655071|gb|EFY51382.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657674|gb|EFY53942.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 19N]
 gi|322664170|gb|EFY60368.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 81038-01]
 gi|322667453|gb|EFY63615.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674701|gb|EFY70793.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 414877]
 gi|322675666|gb|EFY71739.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 366867]
 gi|322682302|gb|EFY78325.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 413180]
 gi|322684905|gb|EFY80903.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 446600]
 gi|322716306|gb|EFZ07877.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. A50]
 gi|323195890|gb|EFZ81061.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609458-1]
 gi|323199007|gb|EFZ84104.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556150-1]
 gi|323204293|gb|EFZ89302.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609460]
 gi|323207640|gb|EFZ92587.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 507440-20]
 gi|323211307|gb|EFZ96151.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556152]
 gi|323214751|gb|EFZ99500.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB101509-0077]
 gi|323221231|gb|EGA05657.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB102109-0047]
 gi|323224028|gb|EGA08321.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB110209-0055]
 gi|323230323|gb|EGA14442.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB111609-0052]
 gi|323233299|gb|EGA17393.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009083312]
 gi|323239336|gb|EGA23386.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009085258]
 gi|323242413|gb|EGA26439.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315731156]
 gi|323246923|gb|EGA30889.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2009159199]
 gi|323254144|gb|EGA37964.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008282]
 gi|323255261|gb|EGA39038.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008283]
 gi|323262724|gb|EGA46280.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008284]
 gi|323264034|gb|EGA47542.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008285]
 gi|323269420|gb|EGA52875.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008287]
 gi|326625059|gb|EGE31404.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Dublin str. 3246]
 gi|326629332|gb|EGE35675.1| STAS domain-containing protein [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 9]
          Length = 98

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              AG      ++ + D  V A      +    +DLS I+ +DT G  L+ + + +   
Sbjct: 13 TLVLAGELDQDVLAPLWDARVEA-----MTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +S   +++++L   
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|223986125|ref|ZP_03636148.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM
           12042]
 gi|223961930|gb|EEF66419.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM
           12042]
          Length = 167

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++   +F F G+  +  I +I  DV+  I++ +Q+     D   +T ID+ G   ++   
Sbjct: 64  QDDALIFAFCGDLDNLSILKIKADVIREIDR-VQAPVVKFDFKDVTFIDSTGIGFLLARY 122

Query: 63  EKY---HGKIKLQGVSTHIEQLFSL 84
            +     G++ L+ +S  I +LF+L
Sbjct: 123 NQVQSYRGELILKNISPAIRRLFAL 147


>gi|261250146|ref|ZP_05942722.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891]
 gi|260939262|gb|EEX95248.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891]
          Length = 109

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          NG   F  +G+     + ++   +     +        V L  + +ID+ G  ++++ +E
Sbjct: 9  NGAAEFALSGDLNRESVPKLWSSLKQ---QQWPGSEVEVSLQQLKKIDSAGMVMLIHLIE 65

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
              +     +S   ++L +L   +
Sbjct: 66 HAKKQNCHIMLSFVPDELRTLFQLS 90


>gi|89899708|ref|YP_522179.1| anti-sigma-factor antagonist domain-containing protein
          [Rhodoferax ferrireducens T118]
 gi|89344445|gb|ABD68648.1| anti-sigma-factor antagonist (STAS) domain protein [Rhodoferax
          ferrireducens T118]
          Length = 121

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 9/85 (10%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63
          +V R  G       +E+   ++             +DLS +TE+DT G +L+M   +   
Sbjct: 12 SVLRIEGELTIFRAAELKPLLLAEPMAQA------IDLSGVTELDTAGVQLLMLAKKMAL 65

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
              K+ L   S  + ++F L++  
Sbjct: 66 ATQRKLSLVAHSPAVIEVFELLNLA 90


>gi|320010157|gb|ADW05007.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331]
          Length = 129

 Score = 44.2 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 23/82 (28%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G    R  G+       ++ +     +       + ++D S +   D+ G   ++     
Sbjct: 18 GAVRLRLVGDLDYDTSEQLVERAQACLAADPAPQTLVLDCSGLHMCDSSGVSALLLIHRG 77

Query: 65 YHGKIKLQGVSTHIEQLFSLIS 86
                +  +      L   + 
Sbjct: 78 TSPGGVVLQLWNAPRFLLRTLE 99


>gi|28868134|ref|NP_790753.1| STAS domain-containing protein [Pseudomonas syringae pv. tomato
          str. DC3000]
 gi|28851371|gb|AAO54448.1| STAS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331018816|gb|EGH98872.1| STAS domain protein [Pseudomonas syringae pv. lachrymans str.
          M302278PT]
          Length = 96

 Score = 44.2 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + I   +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+    
Sbjct: 8  RDDIAHMQIDGELTIYTVTELAARL---LPQIAGAARVEVDLSRVTEMDGAGLQLLAVIQ 64

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
           +         ++   + +      
Sbjct: 65 REAGKTGTALHLTGQSQAVTETFEL 89


>gi|183219914|ref|YP_001837910.1| putative anti-sigma-B factor antagonist [Leptospira biflexa
          serovar Patoc strain 'Patoc 1 (Paris)']
 gi|189910038|ref|YP_001961593.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167774714|gb|ABZ93015.1| Anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167778336|gb|ABZ96634.1| Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B
          factor) [Leptospira biflexa serovar Patoc strain 'Patoc
          1 (Paris)']
          Length = 112

 Score = 44.2 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           NGI V +  GN        + + +  + ++S      I DL  ++ ID+ G  LIM   
Sbjct: 8  SNGIVVLKLFGNLDMLNAGILKERIKESASQS--EHRFIFDLEGVSFIDSSGFGLIMSLN 65

Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84
            + +  G +++  VS  I Q+F +
Sbjct: 66 DKLTELGGGLRIVNVSKTIRQIFRI 90


>gi|50119259|ref|YP_048426.1| hypothetical protein ECA0299 [Pectobacterium atrosepticum
          SCRI1043]
 gi|49609785|emb|CAG73219.1| conserved hypothetical protein [Pectobacterium atrosepticum
          SCRI1043]
          Length = 96

 Score = 44.2 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64
          +     G+     +          +     +    +D+S +  +D+ G  L+M+  ++  
Sbjct: 12 STLALTGDLDRETLLPFWQQRESLL-----AGKTTLDVSGLNRVDSAGLALLMHVYQQPS 66

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
            G+I + G S  ++ L +L +   
Sbjct: 67 SGGEIAIVGASDRLKTLIALYNLNE 91


>gi|260770989|ref|ZP_05879918.1| predicted NTP binding protein (contains STAS domain) [Vibrio
           furnissii CIP 102972]
 gi|260614226|gb|EEX39416.1| predicted NTP binding protein (contains STAS domain) [Vibrio
           furnissii CIP 102972]
          Length = 109

 Score = 44.2 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  +   +G      + E+   +        Q+    + L ++T ID+ G  ++++ +E 
Sbjct: 10  GPALAALSGPLDRDTVPELWAVLQQW---HPQNAECELSLKSVTRIDSAGMVMLIHLLEH 66

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
              +     +S   EQL +L   ++   + +Q  ++    N
Sbjct: 67  AKKQNCHIMLSFVPEQLRTLFQLSNIDAMMSQHIKQPAGVN 107


>gi|22124062|ref|NP_667485.1| hypothetical protein y0142 [Yersinia pestis KIM 10]
 gi|45443557|ref|NP_995096.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51597807|ref|YP_071998.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis IP
          32953]
 gi|108809723|ref|YP_653639.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua]
 gi|108813613|ref|YP_649380.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516]
 gi|145597642|ref|YP_001161718.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F]
 gi|153947165|ref|YP_001399445.1| anti-anti-sigma factor [Yersinia pseudotuberculosis IP 31758]
 gi|153997346|ref|ZP_02022446.1| putative anti-sigma B factor antagonist [Yersinia pestis
          CA88-4125]
 gi|162420439|ref|YP_001605688.1| putative anti-anti-sigma factor [Yersinia pestis Angola]
 gi|165928100|ref|ZP_02223932.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165937544|ref|ZP_02226107.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|166011338|ref|ZP_02232236.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. E1979001]
 gi|166212160|ref|ZP_02238195.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. B42003004]
 gi|167400702|ref|ZP_02306211.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. UG05-0454]
 gi|167420516|ref|ZP_02312269.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167426997|ref|ZP_02318750.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|167470185|ref|ZP_02334889.1| putative anti-anti-sigma factor [Yersinia pestis FV-1]
 gi|170022767|ref|YP_001719272.1| putative anti-sigma B factor antagonist [Yersinia
          pseudotuberculosis YPIII]
 gi|186896999|ref|YP_001874111.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis
          PB1/+]
 gi|218930583|ref|YP_002348458.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92]
 gi|229836873|ref|ZP_04457038.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A]
 gi|229839227|ref|ZP_04459386.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis
          str. PEXU2]
 gi|229899792|ref|ZP_04514933.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis
          str. India 195]
 gi|229904107|ref|ZP_04519218.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516]
 gi|270488542|ref|ZP_06205616.1| anti-anti-sigma factor [Yersinia pestis KIM D27]
 gi|294505307|ref|YP_003569369.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003]
 gi|21956809|gb|AAM83736.1|AE013614_10 hypothetical protein y0142 [Yersinia pestis KIM 10]
 gi|45438426|gb|AAS63973.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51591089|emb|CAH22753.1| Putative anti-sigma B factor antagonist [Yersinia
          pseudotuberculosis IP 32953]
 gi|108777261|gb|ABG19780.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516]
 gi|108781636|gb|ABG15694.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua]
 gi|115349194|emb|CAL22159.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92]
 gi|145209338|gb|ABP38745.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F]
 gi|149288983|gb|EDM39063.1| putative anti-sigma B factor antagonist [Yersinia pestis
          CA88-4125]
 gi|152958660|gb|ABS46121.1| putative anti-anti-sigma factor [Yersinia pseudotuberculosis IP
          31758]
 gi|162353254|gb|ABX87202.1| putative anti-anti-sigma factor [Yersinia pestis Angola]
 gi|165914649|gb|EDR33263.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|165919874|gb|EDR37175.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165989722|gb|EDR42023.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. E1979001]
 gi|166206906|gb|EDR51386.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. B42003004]
 gi|166961322|gb|EDR57343.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167050070|gb|EDR61478.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua
          str. UG05-0454]
 gi|167054037|gb|EDR63865.1| putative anti-anti-sigma factor [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|169749301|gb|ACA66819.1| putative anti-sigma B factor antagonist [Yersinia
          pseudotuberculosis YPIII]
 gi|186700025|gb|ACC90654.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis
          PB1/+]
 gi|229678225|gb|EEO74330.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516]
 gi|229687284|gb|EEO79359.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis
          str. India 195]
 gi|229695593|gb|EEO85640.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis
          str. PEXU2]
 gi|229705816|gb|EEO91825.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A]
 gi|262363370|gb|ACY60091.1| putative anti-sigma B factor antagonist [Yersinia pestis D106004]
 gi|262367252|gb|ACY63809.1| putative anti-sigma B factor antagonist [Yersinia pestis D182038]
 gi|270337046|gb|EFA47823.1| anti-anti-sigma factor [Yersinia pestis KIM D27]
 gi|294355766|gb|ADE66107.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003]
 gi|320017113|gb|ADW00685.1| hypothetical protein YPC_4285 [Yersinia pestis biovar Medievalis
          str. Harbin 35]
          Length = 100

 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  +       +     +D + +D+S +  +D+ G  L+++F E    
Sbjct: 13 TLVLQGELDRETLLPLWQQRETLL-----ADKSRIDVSQLQRVDSSGLALLVHFRELQSQ 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +     +L +LI  
Sbjct: 68 RGHSLEIIGISNRLATLIEL 87


>gi|302542614|ref|ZP_07294956.1| putative STAS domain protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460232|gb|EFL23325.1| putative STAS domain protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 116

 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+TV   AG         I+  +             ++DL  +T +D  G  L+     
Sbjct: 16  GGVTVAEIAGELDIFAAGRISARLDSL--ARTGCPDLVLDLRQVTFLDCAGVSLLCRLRN 73

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTH 89
           +     G+++L  V     +L  ++    
Sbjct: 74  RVLEREGRLRLVIVDPRFLRLLRMVRLED 102


>gi|302519937|ref|ZP_07272279.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
 gi|318056975|ref|ZP_07975698.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actG]
 gi|318081223|ref|ZP_07988555.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actF]
 gi|302428832|gb|EFL00648.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
          Length = 124

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           +G  V R AG         +   V  A+ +     S ++DLS +   D+ G  +++   
Sbjct: 10 RDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSEVHFCDSSGVGVLIAAR 67

Query: 60 YFMEKYHGKIKLQ 72
            M   HG++++ 
Sbjct: 68 RLMRSCHGRLRIV 80


>gi|114321368|ref|YP_743051.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227762|gb|ABI57561.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1]
          Length = 109

 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 3/100 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S      F+ +G+     +  +  +          S    +DL A+   D+ G  L++  
Sbjct: 13  STGEAGRFQLSGDLSFETVPGLWAEAERLFR---GSGDVELDLGAVARTDSAGLALLVAL 69

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
             +     +        EQL ++   +         P+++
Sbjct: 70  TRRAAQHDQAIRFCHFPEQLRAMARLSGLADFLQLAPEKA 109


>gi|229822117|ref|YP_002883643.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
 gi|229568030|gb|ACQ81881.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
          Length = 128

 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 3/100 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +  T    AG        ++AD V  A    +  +   +D + +  +D+ G  L+   
Sbjct: 21  TTDDRTRIVLAGEIDVSLAGDLADAVGRA---ELAGNPTEIDAAQVAFMDSSGIALLARV 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
             +  G++ +      +  L  +        + +  P   
Sbjct: 78  ATRTPGRLAIISPPDVVRFLLEVTRIGDMVDVLDIDPGFP 117


>gi|227326641|ref|ZP_03830665.1| hypothetical protein PcarcW_04679 [Pectobacterium carotovorum
          subsp. carotovorum WPP14]
          Length = 100

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64
          +     G+     +          +     +    +D+S +  +D+ G  L+M+  ++  
Sbjct: 16 STLALTGDLDRETLLPFWQQRESLL-----AGKTTLDVSGLNRVDSAGLALLMHVYQQPS 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
            G+I + G S  ++ L +L +   
Sbjct: 71 SGGEITIVGASDRLKTLIALYNLNE 95


>gi|227112744|ref|ZP_03826400.1| hypothetical protein PcarbP_07269 [Pectobacterium carotovorum
          subsp. brasiliensis PBR1692]
          Length = 96

 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64
          +     G+     +          +     +    +D+S +  +D+ G  L+M+  ++  
Sbjct: 12 STLALTGDLDRETLLPFWQQRESLL-----AGKTTLDVSGLNRVDSAGLALLMHVYQQPS 66

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
            G+I + G S  ++ L +L +   
Sbjct: 67 SGGEITIVGASDRLKTLIALYNLNE 91


>gi|145297396|ref|YP_001140237.1| hypothetical protein ASA_0305 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850168|gb|ABO88489.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 139

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 38/94 (40%), Gaps = 6/94 (6%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V +F+G+ ++P+++ +         +        ++LS +T +D+ G  L++ + + 
Sbjct: 46  GHQVMKFSGDLQAPQVNALWQRRADWWQED------QLELSGVTTLDSAGLALLVKWAKA 99

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
              +     +       ++L +      +    P
Sbjct: 100 VLVRGATPQLVGASTDFYTLANLYGVAGLFQSTP 133


>gi|83748210|ref|ZP_00945237.1| toluene tolerance protein TTG2E [Ralstonia solanacearum UW551]
 gi|207721836|ref|YP_002252274.1| hypothetical protein RSMK02116 [Ralstonia solanacearum MolK2]
 gi|207744514|ref|YP_002260906.1| hypothetical protein RSIPO_02724 [Ralstonia solanacearum IPO1609]
 gi|83725178|gb|EAP72329.1| toluene tolerance protein TTG2E [Ralstonia solanacearum UW551]
 gi|206587003|emb|CAQ17587.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
 gi|206595920|emb|CAQ62847.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 104

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
              +G     E   I  +    ++++ Q+   +  VD + ++++D+    +++ +     
Sbjct: 2   LTLSGPLTHREAPRILREGEAQLSQASQAGTVAVRVDCAGLSQVDSSALAVLLSWQRTAQ 61

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                  ++   E L +L +      +    P  +  ++ 
Sbjct: 62  AAGIALDIAAAPEALRNLATLYGVDALLAVAPATTASHHP 101


>gi|238793700|ref|ZP_04637322.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909]
 gi|238726941|gb|EEQ18473.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909]
          Length = 106

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 5/56 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               G      +  +       +     +    +D+S +  +D+ G  L+++F E
Sbjct: 13 TLVLQGELDRETLLPLWQQREALL-----AGKTRIDVSQLQRVDSSGLALLVHFRE 63


>gi|330872540|gb|EGH06689.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. morsprunorum str. M302280PT]
          Length = 96

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 3/84 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +     +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+     
Sbjct: 9  DDTARIQIDGELTIYTVTELAARL---LPQIGSAARVEVDLSHVTEMDGAGLQLLAVIQR 65

Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87
          +         ++   + +      
Sbjct: 66 EAEKTGTALHLTGQSKAVTETFEL 89


>gi|228962766|ref|ZP_04124032.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228796919|gb|EEM44263.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
          Length = 106

 Score = 43.8 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             F   G   +     +   +   + +       ++D+S +T +D+ G  + M  ++K 
Sbjct: 13 TYTFVLTGELDAHYAPVLKKQLDTILEQ--GHSHIVLDVSRVTYMDSTGLGVCMGLLKKV 70

Query: 66 HGK---IKLQGVSTHIEQLFSL 84
          H +   +++ GVS+ I++LF L
Sbjct: 71 HKQDGFLEVTGVSSRIQRLFDL 92


>gi|317123693|ref|YP_004097805.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043]
 gi|315587781|gb|ADU47078.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043]
          Length = 127

 Score = 43.8 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60
             TV    G         + + +   I         IVDLS +T +D+ G  ++   + 
Sbjct: 11 GDRTVVHLGGEIDVYTAPFVREKLDEQI--HAGRADLIVDLSEVTFLDSTGLGVLVGRLK 68

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
          F     G +KL G S  + ++F++
Sbjct: 69 FARTRGGSLKLVGTSERVLRVFAI 92


>gi|325916555|ref|ZP_08178821.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas vesicatoria ATCC 35937]
 gi|325537228|gb|EGD08958.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas vesicatoria ATCC 35937]
          Length = 109

 Score = 43.8 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+          +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISFT 88
             +   ++     +F +I   
Sbjct: 69 ADGRPFSLTDSSRAVFDVIELL 90


>gi|296313908|ref|ZP_06863849.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC
          43768]
 gi|296839442|gb|EFH23380.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC
          43768]
          Length = 100

 Score = 43.8 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+     ++   D       +    ++  VD   +   D+    L++  +    G
Sbjct: 17 TLHIGGDITVKTLTR--DAFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 74

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 75 SVRLTGIPESVRALSELYE 93


>gi|59714203|ref|YP_206978.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio
           fischeri ES114]
 gi|59482451|gb|AAW88090.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio
           fischeri ES114]
          Length = 105

 Score = 43.8 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S   I V    G+  +    +I   +   I +  +     +DLS +  +D+ G   I+Y 
Sbjct: 8   SNEDILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
            ++       ++++       +L  L+   +   +
Sbjct: 66  YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100


>gi|77361455|ref|YP_341030.1| anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis
          TAC125]
 gi|76876366|emb|CAI87588.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 97

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59
          +S+     FR +G      I    D+  +      +      DLS ++ +DT G A LI 
Sbjct: 6  ISQVDEQHFRVSGELTRSSIG---DEKGLGSQAITKHKICYFDLSDVSRVDTAGLAWLIH 62

Query: 60 YFME--KYHGKIKLQGVSTHIEQLFSL 84
           F +  +   +++LQ     ++ L  L
Sbjct: 63 TFAQYKQQGIRLELQNPPEQLQNLMQL 89


>gi|125972642|ref|YP_001036552.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC
          27405]
 gi|256004729|ref|ZP_05429705.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360]
 gi|281416834|ref|ZP_06247854.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20]
 gi|125712867|gb|ABN51359.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC
          27405]
 gi|255991322|gb|EEU01428.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360]
 gi|281408236|gb|EFB38494.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20]
 gi|316941120|gb|ADU75154.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 1313]
          Length = 111

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +     V    G         I   +   + KS    + ++D S +T +D+ G  +IM  
Sbjct: 7  NRGNTLVAVLNGELDHHTAEYIRQKLDAEMMKSTT-KNMVLDFSKVTFMDSSGIGVIMGR 65

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84
             + K +GK+ L G++  I+++F +
Sbjct: 66 YKNIRKLNGKMSLAGINDKIKRIFEM 91


>gi|295838221|ref|ZP_06825154.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197696633|gb|EDY43566.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 124

 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           +G  V R AG         +   V  A+ +     S ++DLS +   D+ G  +++   
Sbjct: 10 RDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSQVHFCDSSGVGVLIAAR 67

Query: 60 YFMEKYHGKIKLQ 72
            M   HG++++ 
Sbjct: 68 RLMRSCHGRLRIV 80


>gi|113461312|ref|YP_719381.1| hypothetical protein HS_1169 [Haemophilus somnus 129PT]
 gi|112823355|gb|ABI25444.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 110

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 4  NGITVFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +     R  G      +   +     +  +  +     + +LS +  ID+ G  L+  F+
Sbjct: 14 SDKMTLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFI 73

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
           +   ++  Q +     QL  L   
Sbjct: 74 NELEKQVSSQKIHNAPIQLEILADL 98


>gi|330966331|gb|EGH66591.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. actinidiae str. M302091]
          Length = 96

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 3/84 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +     +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+     
Sbjct: 9  DDTARIQIDGELTIYTVTELAARL---LPQIGSAARVEVDLSHVTEMDGAGLQLLAVIQR 65

Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87
          +         ++   + +      
Sbjct: 66 EAEKTGTALHLTGQSKAVTETFEL 89


>gi|255592342|ref|XP_002535675.1| conserved hypothetical protein [Ricinus communis]
 gi|223522326|gb|EEF26708.1| conserved hypothetical protein [Ricinus communis]
          Length = 113

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78
           I    +     +      D   +DLS I+++DT G +L++    +     K   V  H 
Sbjct: 18 TIYNAPEQKTRLLTALSGCDELELDLSQISDMDTAGFQLLVLAKREAIRAGKALNVVEHS 77

Query: 79 EQLFSLISF 87
          + +  L+  
Sbjct: 78 KAVTDLLDL 86


>gi|315927604|gb|EFV06935.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 114

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
                G W    I ++     +A+   IQS   I D   +  IDT G    +     ++ 
Sbjct: 11  TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
            + KI  +G+++  + LF L    +++  K + 
Sbjct: 68  KNIKITKEGLNSRFQTLFELCEKNYQRLGKTKN 100


>gi|127511049|ref|YP_001092246.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4]
 gi|126636344|gb|ABO21987.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4]
          Length = 99

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R A       I ++  D+   +     SD+  +D S +T +DT GA+L+ +        
Sbjct: 6  IRLASELTIRNIQQVHHDIAEQL---TASDTLCIDASQLTRVDTSGAQLLYFLHHYCQTH 62

Query: 69 IKLQGVSTHIEQLFSLISFT 88
                +   E++   ++  
Sbjct: 63 HHAIEWTPPAEEVEHTLAEL 82


>gi|294138951|ref|YP_003554929.1| hypothetical protein SVI_0180 [Shewanella violacea DSS12]
 gi|293325420|dbj|BAJ00151.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 104

 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 3/78 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R         I  I   +   +      +   +D S ++ +DT GA+L+  F      +
Sbjct: 6  IRLDSELTIRNIQPIFTQLSALL---THDEELHIDASQLSRVDTAGAQLLYLFSRTCASR 62

Query: 69 IKLQGVSTHIEQLFSLIS 86
                     +L + + 
Sbjct: 63 SLKVDWLNCRPELKANLE 80


>gi|326781288|ref|ZP_08240553.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces
           cf. griseus XylebKG-1]
 gi|326661621|gb|EGE46467.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces
           cf. griseus XylebKG-1]
          Length = 136

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 26/85 (30%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G       G+        + ++V   +          +  + +  +D+ G   ++    
Sbjct: 16  EGSIRIGLQGDLDYDSADHLLNEVTAYLAARPALTDLHLHCAELDTVDSTGLSALLMISR 75

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFT 88
           +  G      +    E+L  L+  T
Sbjct: 76  RTSGAGVRLHLDARPERLDRLLHLT 100


>gi|67463658|pdb|1T6R|A Chain A, Solution Structure Of Tm1442, A Putative Anti Sigma
          Factor Antagonist In Phosphorylated State
          Length = 110

 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++   + R  G+  +   SE+ + +   I+ + +    ++DLS+++ +D  G   ++  +
Sbjct: 11 QDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDXAGLGTLVVIL 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +      K   +S+  E +  ++  TH
Sbjct: 70 KDAKINGKEFILSSLKESISRILKLTH 96


>gi|297199462|ref|ZP_06916859.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197712996|gb|EDY57030.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 233

 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/131 (8%), Positives = 35/131 (26%), Gaps = 6/131 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           + G  V    G         +   +      +   D   +D++ +T +DT G + +    
Sbjct: 33  DGGRAVLVARGELIHGCADALGRTLARLPEDT---DRVDLDMTGVTFMDTTGLQFLEVLD 89

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
               +   ++   G +    ++  +        +     +     +S          ++ 
Sbjct: 90  TYGRRRRVRVTATGWAEQPRRVLEMAGLDPDDPLHGPGTRWEPVPSSMVLERTQQLDRLR 149

Query: 120 KFINDSCSQAH 130
             +        
Sbjct: 150 TEVEQLRQAIA 160


>gi|332038538|gb|EGI74981.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          haloplanktis ANT/505]
          Length = 97

 Score = 43.4 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59
          +S+     F  +G      I    D+ ++      +      DLS ++ +DT G A LI 
Sbjct: 6  ISQVDGQHFGVSGELTRNSIG---DEQLLNNKLLTKHKIIYFDLSGVSRVDTAGLAWLIH 62

Query: 60 YF--MEKYHGKIKLQGVSTHIEQLFSL 84
           F  +++   +++LQ +   ++ L  L
Sbjct: 63 SFAELKQQGIRLELQNLPEQLQNLMQL 89


>gi|254380525|ref|ZP_04995891.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1]
 gi|194339436|gb|EDX20402.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1]
          Length = 172

 Score = 43.4 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 3/93 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            T     G       S +          ++  ++ ++DLSA+T +D+ G  +++    + 
Sbjct: 83  RTALTLTGALDMDTCSRVT---ATTDTLTLDGNTLVLDLSAVTFMDSSGLNMLLTLRNRA 139

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
             +     +     Q+  L+  T  + +    P
Sbjct: 140 EAEQGTLELRGLPGQVLRLLDITGTRDLFILAP 172


>gi|88861153|ref|ZP_01135787.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          tunicata D2]
 gi|88816875|gb|EAR26696.1| putative anti-sigma B factor antagonist [Pseudoalteromonas
          tunicata D2]
          Length = 97

 Score = 43.4 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYF--MEKY 65
          F  +G      ++ I         K    +  I DLSAI+ +DT G A LI     +++ 
Sbjct: 14 FVLSGELSHETVAAIE---FSKKFKLNDVNRIIFDLSAISRVDTAGLAWLIHTLSELQQQ 70

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
             + L+ V   +++L  L+  + 
Sbjct: 71 EIHLTLRNVPEQLQKLMQLVQVSQ 94


>gi|296268344|ref|YP_003650976.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
 gi|296091131|gb|ADG87083.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833]
          Length = 115

 Score = 43.4 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TV    G      + E+   V+ AI          VDL+A+  IDT G  +++  + K  
Sbjct: 15 TVLSLRGELDLYAVDELRRPVLTAIAAH--GPWLAVDLTAVNFIDTTGLGMLVRLLNKLR 72

Query: 67 ---GKIKLQGVSTHIEQLFS 83
             G + L G    ++++  
Sbjct: 73 EKNGDLALIGPRGQVKRILQ 92


>gi|188993826|ref|YP_001905836.1| hypothetical protein xccb100_4431 [Xanthomonas campestris pv.
          campestris str. B100]
 gi|167735586|emb|CAP53804.1| hypothetical protein xcc-b100_4431 [Xanthomonas campestris pv.
          campestris]
          Length = 97

 Score = 43.4 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
              +G      ++++    +  +     + +  +DLS +  +D+ G  ++     +   
Sbjct: 13 TLAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAELAARLRS 67

Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           G   + G ++ +++L +    +     +
Sbjct: 68 NGNGTVVGKASGLDELCAAYRLSPSLDFQ 96


>gi|54293820|ref|YP_126235.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens]
 gi|53753652|emb|CAH15110.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens]
          Length = 93

 Score = 43.4 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65
          F+  G      +  + D +  A+ +  +     +DLS +T  D+ G  LI+      ++ 
Sbjct: 6  FKPGGELTFKSVVSVRDKLYKALMEDTRER-FCLDLSDVTHCDSAGLALIIEARKLCKQN 64

Query: 66 HGKIKLQGVSTHIEQLFSLI 85
          +    + G+S   + L    
Sbjct: 65 NKVFDVIGISPETQSLAEFC 84


>gi|21219202|ref|NP_624981.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)]
 gi|289773659|ref|ZP_06533037.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
 gi|6434742|emb|CAB61189.1| putative anti-sigma factor antagonist [Streptomyces coelicolor
           A3(2)]
 gi|289703858|gb|EFD71287.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
          Length = 183

 Score = 43.4 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 9/95 (9%), Positives = 33/95 (34%), Gaps = 3/95 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ +   AG         + D ++ ++  +      +VD   +  +D+ G  +++    
Sbjct: 84  DGVCLVILAGEVDLDGSGHLRDVLLSSVESAPG---TVVDFGEVGFLDSSGINVLISAHR 140

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
               +     ++   + +  ++       +    P
Sbjct: 141 AAESRGVFFRLAAPRDAVERVLRLVGVDALIPCYP 175


>gi|251791362|ref|YP_003006083.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591]
 gi|247539983|gb|ACT08604.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591]
          Length = 97

 Score = 43.4 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G      +  +       +  S      ++D+  +  +D+ G  L+++F  +   
Sbjct: 13 ILFLEGCLDRNSLLPLWQQRNALLAASR-----VLDVEQVERVDSAGLALLVHFYHQQEQ 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     ++   E+L +LI  
Sbjct: 68 QGTPMKITGASERLRTLIQL 87


>gi|152972115|ref|YP_001337261.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|262042750|ref|ZP_06015904.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
          rhinoscleromatis ATCC 13884]
 gi|150956964|gb|ABR78994.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|259039975|gb|EEW41092.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
          rhinoscleromatis ATCC 13884]
          Length = 96

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64
               G      +  + +           + +AI+DLS  T +DT G  L+++    + +
Sbjct: 13 TLALHGELDQDLLVPLWEA-----RAQATAGTAIIDLSQTTRVDTAGLALLVHFMALIRR 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
             + +L G S +++ L  L + 
Sbjct: 68 QGREAQLVGKSENLQTLIGLYNL 90


>gi|238896698|ref|YP_002921443.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae NTUH-K2044]
 gi|238549025|dbj|BAH65376.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae subsp.
          pneumoniae NTUH-K2044]
          Length = 96

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64
               G      +  + +           + +AI+DLS  T +DT G  L+++    + +
Sbjct: 13 TLALHGELDQDLLVPLWEA-----RAQATAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
             + +L G S +++ L  L + 
Sbjct: 68 QGREAQLVGKSENLQTLIGLYNL 90


>gi|320010158|gb|ADW05008.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces
           flavogriseus ATCC 33331]
          Length = 131

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 35/110 (31%), Gaps = 10/110 (9%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V R  G+  S  I  +   +  A   +      ++D SA+T  D+    L++    
Sbjct: 24  DGHWVVRAQGDLDSDTIDPLFIALWEA---APGHAVVVLDASAVTFADSSFLSLLIEVHR 80

Query: 64  KYHGKIKLQGV-------STHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           +   ++   G        +  ++++               +   +     
Sbjct: 81  RTELRVAAPGTVLARLLRTAGLDRVIRSYPTLEAALGDPPRGSGAPPAPP 130


>gi|197337497|ref|YP_002158686.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11]
 gi|197314749|gb|ACH64198.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11]
          Length = 105

 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S   I V    G+  +    +I   +   I +  +     +DLS +  +D+ G   I+Y 
Sbjct: 8   SNADILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
            ++       ++++       +L  L+   +   +
Sbjct: 66  YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100


>gi|284045931|ref|YP_003396271.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283950152|gb|ADB52896.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 119

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G    R  G +    +  + D +  A +   Q     +DL  +T +D+ G   I+   +
Sbjct: 23  GGTYRMRLRGEFDLAAVETVEDALARAFDGDTQ--LLEIDLGQLTFLDSSGLRTILEARD 80

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           +      +++L      ++++F++          ++ 
Sbjct: 81  RAASSGVRLRLVRGIEPVQRVFAITGLEASLPFADEP 117


>gi|78187225|ref|YP_375268.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum
          DSM 273]
 gi|78167127|gb|ABB24225.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum
          DSM 273]
          Length = 107

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 4/90 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          NGI V    G   +             +  +  S   I++L  +  ID+ G  L++    
Sbjct: 9  NGIKVLSLEGVLNAASSP----KFKAYLETADHSGPMIINLEQVEFIDSSGLGLLVRLAR 64

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
          +     +   ++   +++  +   T    +
Sbjct: 65 QKKSANEALKLAKMNDRVKRVFEITQAHSL 94


>gi|329997633|ref|ZP_08302890.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3]
 gi|328538943|gb|EGF64997.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3]
          Length = 95

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64
               G      +  + +           + +AI+DLS  T +DT G  L+++    + +
Sbjct: 13 TLALHGELDQDLLVPLWEA-----RAQATAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
             + +L G S +++ L  L + 
Sbjct: 68 QGREAQLVGKSENLQTLIGLYNL 90


>gi|298485494|ref|ZP_07003578.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
          3335]
 gi|298160000|gb|EFI01037.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
          3335]
          Length = 96

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++   T  +  G      ++E+A  +   + K   +    VDLS +TE+D  G +L+   
Sbjct: 7  NQADATRVQIDGELTIYTVTELAARL---LPKITGAARVEVDLSQVTEMDGAGLQLLAVI 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +      
Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFEL 89


>gi|271965897|ref|YP_003340093.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM
           43021]
 gi|270509072|gb|ACZ87350.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM
           43021]
          Length = 109

 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 28/98 (28%), Gaps = 2/98 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G       G+      +E+        +  +      +DLS +  +D+ G   ++  
Sbjct: 14  TAEGTVRLVLTGDLDYDTAAELFTLAQELFSADL--RLLELDLSGLDFVDSSGVAALINV 71

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
                 +     +      L  L   T   ++    P 
Sbjct: 72  YNTARARNSAMRIIALTPYLRHLFKVTALDQVFELPPA 109


>gi|283850920|ref|ZP_06368205.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
 gi|283573566|gb|EFC21541.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
          Length = 115

 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 4/108 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---I 58
           +     V   +G      + E+  ++   I  + +  + ++DLS +  +D+ G  L   +
Sbjct: 8   NTEEALVIGLSGEIIMDVVIELKAEIAPLIQNASR-KAVVLDLSGVAFLDSSGVGLFIGL 66

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
               E       +   S  I +LF ++  T    +            S
Sbjct: 67  RRLCEDEGKAFSIANPSPPIRKLFDMLRLTDYFAVSATPVTSPGATPS 114


>gi|298292174|ref|YP_003694113.1| ABC transporter [Starkeya novella DSM 506]
 gi|296928685|gb|ADH89494.1| ABC transporter related protein [Starkeya novella DSM 506]
          Length = 506

 Score = 43.0 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 70/172 (40%), Gaps = 7/172 (4%)

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262
           +  +Q      L+ ++++  R+ + I A++G+  ++ ++ A+R + +  +R L+     A
Sbjct: 331 IGFVQTTISVPLIASILVVARNSAVICADLGNRTLSAQLPAMRNLAIPGLRYLVVSIFVA 390

Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS-----RFHSTATLANIFTGLI-- 315
             +SL LLT+ A  +A   A      ++      F+      R            G +  
Sbjct: 391 NTLSLSLLTVAALATASWAALQTWQVFFPDQPMEFWQENYFRRLIEAGPALYAQLGWVGA 450

Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           K    +      A+  G    +   S+   +   +V  +S+ ++  + FAI 
Sbjct: 451 KIALSSLLGSGAAILIGLRPKLSVVSINNAIAKAIVIGVSLTLLSHAFFAIL 502


>gi|308070733|ref|YP_003872338.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
 gi|305860012|gb|ADM71800.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
          Length = 112

 Score = 43.0 bits (100), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + +G+     +G      ++     V+  +      D  I++L  +  ID+ G  +++  
Sbjct: 15 TTDGVNTVYLSGELDL-SVAPDFRLVMEPLVGESSQD-LIINLRDLKYIDSTGIGILLSI 72

Query: 62 MEKYHG---KIKLQGVSTHIEQLFSL 84
          ++  HG   +  +Q +   I++LF +
Sbjct: 73 LKARHGMESRFAVQEIPPQIQKLFDM 98


>gi|126347595|emb|CAJ89307.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens
          ATCC 23877]
          Length = 160

 Score = 43.0 bits (100), Expect = 0.065,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G+ +   AG+  +     +  +    I +       ++DLS +   D+ G   ++     
Sbjct: 15 GLAIATVAGDVDTRTADTLRREASEIIQQGC--PRLVLDLSGVRFCDSAGLSALIGLWHA 72

Query: 65 YHGKIKLQGVSTHIEQLFSLI 85
                   ++   ++L  ++
Sbjct: 73 AQAAGGALRLADVPDRLMRML 93


>gi|297157353|gb|ADI07065.1| putative anti-anti-sigma-factor [Streptomyces bingchenggensis
           BCW-1]
          Length = 130

 Score = 43.0 bits (100), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+TV    G       + I+  +     ++    + ++DL  +T +D  G  L+     
Sbjct: 16  GGVTVAEITGELDIFAAARISPRLDSLAREAR--PNLVLDLRMVTFLDCAGVSLLCRLRN 73

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTH 89
           +     G+++L  V     +L  ++    
Sbjct: 74  RALERGGRLRLVIVDPRFTRLLRMVRLED 102


>gi|271961671|ref|YP_003335867.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM
           43021]
 gi|270504846|gb|ACZ83124.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM
           43021]
          Length = 123

 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 2/104 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             +++   AG         +  D+  +I     S   I+DL  +T  D+ G ++ +   +
Sbjct: 16  ENVSLLALAGELDYTNAERLQHDLQESIG--PDSRDLIIDLKDLTFCDSTGIQVFLAVRK 73

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
             HG+     ++    +L  L   T   +    +P       + 
Sbjct: 74  LVHGRGHSVVLAQLHPRLERLFHLTGLTQAFGIQPTVGDAVEAL 117


>gi|320538925|ref|ZP_08038601.1| putative conserved hypothetical protein [Serratia symbiotica str.
          Tucson]
 gi|320031085|gb|EFW13088.1| putative conserved hypothetical protein [Serratia symbiotica str.
          Tucson]
          Length = 119

 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 10/80 (12%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  +          ++ +D   +D++ +  +D+ G  L+++     H 
Sbjct: 13 TLILRGVLDRETLLPLWQQ-----RGALMADKTEIDVAQLQRVDSAGLALLVHLRAHQHQ 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +S   ++L +L++ 
Sbjct: 68 RGVELKISGATDRLRTLVAL 87


>gi|319651420|ref|ZP_08005549.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2]
 gi|317396951|gb|EFV77660.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2]
          Length = 116

 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           +   R +G        E+ +    AI +       I++L  ++ +D+ G  +I+     
Sbjct: 12 DVLCIRLSGELDHHSADELREQATRAIEEH-DIHHIILNLEQLSFMDSSGLGVILGRYKQ 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          +++ HG++ +  +S  +++LF +
Sbjct: 71 IKQKHGEMVVCAISPAVQRLFDM 93


>gi|289674998|ref|ZP_06495888.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae FF5]
          Length = 100

 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            T  +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+     +
Sbjct: 14 DTTRVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVIQRE 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
                   ++   + +      
Sbjct: 71 AGKTGTSLHLTGQSKAVSETFEL 93


>gi|257440907|ref|ZP_05616662.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii
          A2-165]
 gi|257196687|gb|EEU94971.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii
          A2-165]
          Length = 104

 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 4/88 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          + + +     AG         +   +  A+       + ++DL  +  +D+ G  LI+  
Sbjct: 8  AADDLLYAYLAGEIDHDAAQNLRIQLDDALLAR-TPKTLVLDLGGVGFMDSSGVGLILGR 66

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLIS 86
                  G +++Q     + ++  L +
Sbjct: 67 QRCARSLGGTLRIQHAPEQLRRVLRLAN 94


>gi|56415238|ref|YP_152313.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. ATCC 9150]
 gi|197364168|ref|YP_002143805.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. AKU_12601]
 gi|56129495|gb|AAV79001.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095645|emb|CAR61213.1| possible anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. AKU_12601]
          Length = 98

 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              AG      ++ + D  V A      +    +DLS I+ +DT G  L+ + + +   
Sbjct: 13 TLMLAGELDQDVLAPLWDARVEA-----MTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +S   +++++L   
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|300690222|ref|YP_003751217.1| hypothetical protein RPSI07_0541 [Ralstonia solanacearum PSI07]
 gi|299077282|emb|CBJ49908.1| conserved protein of unknown function, STAS domain [Ralstonia
           solanacearum PSI07]
          Length = 104

 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 36/100 (36%), Gaps = 2/100 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
              +G     E   +  +    + ++ Q+   +  VD + ++++D+    +++ +     
Sbjct: 2   LTLSGPLTHREAPRVLREGEAQLGQARQAGTAAVRVDCAGLSQVDSSALAVLLSWQRTAQ 61

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                  ++   E L +L +      +    P  +  ++ 
Sbjct: 62  VAGIALDIAAAPEALRNLAALYGVDTLLAIAPATTASHHP 101


>gi|238758305|ref|ZP_04619483.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236]
 gi|238703428|gb|EEP95967.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236]
          Length = 100

 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64
               G      +  +     + +     +D   +D+S +  +D+ G  L+++F E   +
Sbjct: 13 TLILQGELDRETLLPLWQQREVLL-----ADKTHIDVSQLQRVDSSGLALLVHFRELRAR 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
              + + GVS  +  L  L +  H   ++
Sbjct: 68 QGVSLTVIGVSDRLSTLIELYNLQHIIPVE 97


>gi|21243591|ref|NP_643173.1| hypothetical protein XAC2864 [Xanthomonas axonopodis pv. citri
          str. 306]
 gi|78048575|ref|YP_364750.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|294625044|ref|ZP_06703693.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 11122]
 gi|294665333|ref|ZP_06730624.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 10535]
 gi|325928059|ref|ZP_08189272.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas perforans 91-118]
 gi|21109162|gb|AAM37709.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
          str. 306]
 gi|78037005|emb|CAJ24725.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|292600674|gb|EFF44762.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 11122]
 gi|292604882|gb|EFF48242.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 10535]
 gi|325541557|gb|EGD13086.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas perforans 91-118]
          Length = 109

 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISFT 88
             +   ++     +  +I   
Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90


>gi|119896700|ref|YP_931913.1| STAS domain-containing protein [Azoarcus sp. BH72]
 gi|119669113|emb|CAL93026.1| putative STAS domain protein [Azoarcus sp. BH72]
          Length = 102

 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 14  NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIK 70
           +      +E    +V A+    Q+D   +DLSA+ EIDT G +L++      ++   + +
Sbjct: 14  DMTIYHAAEQKQQLVAALA---QADELQIDLSAVAEIDTAGFQLLILVKREAQRLGKRAR 70

Query: 71  LQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +   S  + ++    +           P  
Sbjct: 71  IVAHSAAVREVVDFFNMAAEFGDPMLMPAP 100


>gi|284034232|ref|YP_003384163.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836]
 gi|283813525|gb|ADB35364.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836]
          Length = 121

 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G+       E+ D +   + + I +   ++DL+ +  +D+ G  +++   ++   
Sbjct: 20  LVRLSGDVDIDSSDELTDALKAVLAE-IGARPLVLDLTEVEFMDSSGLGVLVGAHKEATA 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +     ++    ++  ++  T   K+    P
Sbjct: 79  QGGTLILAAPHPRVAKILRITKLHKVFTVSP 109


>gi|320330208|gb|EFW86193.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea
          str. race 4]
 gi|330880449|gb|EGH14598.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea
          str. race 4]
          Length = 96

 Score = 43.0 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++   T  +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+   
Sbjct: 7  NQADATRVQIDGELTIYTVTELAARL---LPQITGAARVEVDLSQVTEMDGAGLQLLAVI 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +      
Sbjct: 64 QREAGKTGTSLHMTGQSKAVTETFEL 89


>gi|261366788|ref|ZP_05979671.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM
          15176]
 gi|282571619|gb|EFB77154.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM
          15176]
          Length = 98

 Score = 43.0 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          +G      +G         +  ++   ++  +  +   +D S +T +D+ G  LI+    
Sbjct: 10 SGTLAAYLSGEIDHHAAQSLRREIDAQVDDRLP-ELLTLDFSGVTFMDSSGVGLILGRDR 68

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
           +    G++ +Q     + ++  L  
Sbjct: 69 HIASLGGRLTVQNPPPAVRRMLDLAR 94


>gi|291614052|ref|YP_003524209.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1]
 gi|291584164|gb|ADE11822.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1]
          Length = 108

 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S +G   F   G       +E+ D +   IN    +D   +DLS ++EID+ G +L++  
Sbjct: 7  SSSGKAGFAIEGELTIYRAAELKDVIYPHIN---HADVIEIDLSRVSEIDSAGLQLLVSA 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +   + K   +  H + +  ++  
Sbjct: 64 KLEAMIRDKQLHLVGHSKPVQEMLDL 89


>gi|239908932|ref|YP_002955674.1| anti-sigma factor antagonist family protein [Desulfovibrio
           magneticus RS-1]
 gi|239798799|dbj|BAH77788.1| anti-sigma factor antagonist family protein [Desulfovibrio
           magneticus RS-1]
          Length = 259

 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
           +G TV   AG+  +     + + V   +          +DLS +  ID++G  L++    
Sbjct: 166 DGRTVLTPAGDIVASAADGLRNAVKDLLPGL--DGPFAMDLSKVELIDSVGIGLLIAVHN 223

Query: 62  -MEKYHGKIKLQGVSTHIEQLFSLISF 87
            + K  G++ L  VS  +  L   +  
Sbjct: 224 SLSKKGGRLALDHVSPDLAALLRTMRL 250


>gi|332172343|gb|AEE21597.1| anti-sigma-factor antagonist [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 110

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 1/86 (1%)

Query: 9   FRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           F  +G+     +       +    +         +DL  +  IDT G   IM  +     
Sbjct: 21  FVLSGSLNRDTVPYFWRNSLQQLASAQSDDKPLTLDLHNVGHIDTAGLAWIMNLIRDTKQ 80

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKI 93
           K     ++     L +L   +  ++ 
Sbjct: 81  KNIQFKIANPPATLLNLAKISDVERF 106


>gi|256393986|ref|YP_003115550.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256360212|gb|ACU73709.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 118

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G  V   AG+            +         S +  +D SA+T +D++G  +++   ++
Sbjct: 12 GRVVVTLAGDVDLAAFRRFEAGLAQ---SWDGSTNLTIDCSAVTFLDSMGLRVLVRARQR 68

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
               +   ++     +  ++    
Sbjct: 69 AADHDRDVTLAAPSRPVLRVLQLAE 93


>gi|291615989|ref|YP_003518731.1| YrbB [Pantoea ananatis LMG 20103]
 gi|291151019|gb|ADD75603.1| YrbB [Pantoea ananatis LMG 20103]
 gi|327396241|dbj|BAK13663.1| anti-sigma factor antagonist YrbB [Pantoea ananatis AJ13355]
          Length = 98

 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
              R  G      +  + +     +N        ++D+SA+  +D+ G  L+++  E  
Sbjct: 11 ANTLRLEGELDRDTLLSLWEQREALVNAVE-----LIDVSALQRVDSSGLALLVHLREIT 65

Query: 64 -KYHGKIKLQGVSTHIEQLFSLISF 87
           +  G ++  G+   ++ L +L + 
Sbjct: 66 SQQGGSLRFVGIGDKLQSLITLYNL 90


>gi|271498873|ref|YP_003331898.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586]
 gi|270342428|gb|ACZ75193.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586]
          Length = 97

 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  +       +     + S ++D+  +  +D+ G  L+++F  +   
Sbjct: 13 TLYLEGCLDRNSLLPLWQQRDALL-----AGSRVLDVGQVERVDSAGLALLVHFYHQQEQ 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     ++   E+L +LI  
Sbjct: 68 QGTPMTITGASERLRTLIQL 87


>gi|148977762|ref|ZP_01814318.1| putative anti-sigma B factor antagonist [Vibrionales bacterium
           SWAT-3]
 gi|145962976|gb|EDK28246.1| putative anti-sigma B factor antagonist [Vibrionales bacterium
           SWAT-3]
          Length = 102

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 3/91 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           +  G+     +  I   +       I   S  +DLS I  +D+ G  ++++ +E    + 
Sbjct: 15  QLLGDIDRDTVPAIWRILEKW---QITESSVEIDLSHINRVDSAGMVMLIHLLEHAKNQN 71

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
               +S   EQL +L   ++ + +  +  + 
Sbjct: 72  CHIMLSFVPEQLRTLFQLSNIQPMMAEHIKN 102


>gi|256376432|ref|YP_003100092.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255920735|gb|ACU36246.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 118

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 1/95 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA-ELIMYFM 62
            G  V   +G      +  +  +++ A+ +    +  +VDL+ +    + G  EL+   +
Sbjct: 16  GGAVVLHVSGEIDQLTVEPLHRELLSALARVRPPEPVVVDLTEVGFFGSAGLNELVTGHL 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
           +      +L  V+ H E L  L      +++    
Sbjct: 76  QAELLGTRLSVVAGHREVLRPLAISGLDEQLDVHP 110


>gi|21232130|ref|NP_638047.1| hypothetical protein XCC2699 [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66767741|ref|YP_242503.1| hypothetical protein XC_1415 [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|188990858|ref|YP_001902868.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv.
          campestris str. B100]
 gi|21113879|gb|AAM41971.1| conserved hypothetical protein [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66573073|gb|AAY48483.1| conserved hypothetical protein [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|167732618|emb|CAP50812.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv.
          campestris]
          Length = 109

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+          +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGVRLDLAAVSEIDTTGLQLLLATKQAVQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISFT 88
             +   ++     +  +I   
Sbjct: 69 ADGRPFVLTDSSRAVVDVIELL 90


>gi|325922307|ref|ZP_08184087.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas gardneri ATCC 19865]
 gi|325547212|gb|EGD18286.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Xanthomonas gardneri ATCC 19865]
          Length = 109

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL+A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISFT 88
             +   ++     +  +I   
Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90


>gi|118472389|ref|YP_890754.1| anti-sigma factor antagonist [Mycobacterium smegmatis str. MC2
          155]
 gi|118173676|gb|ABK74572.1| anti-sigma factor antagonist [Mycobacterium smegmatis str. MC2
          155]
          Length = 116

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 2  SENGI--TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +ENG        AG       +++ D V   ++ +   D   +D + +T  D+ G   ++
Sbjct: 9  AENGSRSATVTVAGELDFMTTNKLVDYVSELLSTNQTLDDLRLDCADLTFCDSAGLSGLL 68

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLIS 86
              +         +      L  L+ 
Sbjct: 69 NIHRQTSPAGIQLHIDRRPPHLERLLD 95


>gi|59711006|ref|YP_203782.1| NTP-binding protein [Vibrio fischeri ES114]
 gi|197334778|ref|YP_002155155.1| YrbB protein [Vibrio fischeri MJ11]
 gi|59479107|gb|AAW84894.1| predicted NTP-binding protein [Vibrio fischeri ES114]
 gi|197316268|gb|ACH65715.1| YrbB protein [Vibrio fischeri MJ11]
          Length = 106

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            F G      +  I + +              VDL+ +  ID+ G  L+++ +E    +
Sbjct: 14 ISFKGALDRETVPNIWNKLTKW---QPNLSQVKVDLAHVNRIDSAGLVLLLHLIEHAKNQ 70

Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93
                +   +QL +LI  ++ + +
Sbjct: 71 NCHIMFTFVPDQLITLIQLSNVESL 95


>gi|148273908|ref|YP_001223469.1| hypothetical protein CMM_2724 [Clavibacter michiganensis subsp.
          michiganensis NCPPB 382]
 gi|147831838|emb|CAN02808.1| unnamed protein product [Clavibacter michiganensis subsp.
          michiganensis NCPPB 382]
          Length = 112

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 2/86 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+ +TV   AG        E+   +  A+  +      +VDL+ +  ID+ G   ++  +
Sbjct: 11 EDDVTVVTAAGMLNMAAAPELRQAIHDALEPAPA--RIVVDLAGVDFIDSSGLGALIAGL 68

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
                     +S    Q+  ++  +
Sbjct: 69 RSARDAGGDLRISAPGPQVQMVLQLS 94


>gi|311893945|dbj|BAJ26353.1| putative antagonist protein [Kitasatospora setae KM-6054]
          Length = 111

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 3/94 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63
              R  G        E+   V   +          VD +A++  D++G   ++       
Sbjct: 18  VTVRVEGELDHESCEELVRAVAAHLAAQPPYQVVRVDCAAMSLCDSMGLSALLQIRRDTD 77

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
               ++ L+    H+++L  L             
Sbjct: 78  AAGRRLLLEHRPAHLDRLLRLTGTAAYLLADRAP 111


>gi|283850846|ref|ZP_06368132.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
 gi|283573769|gb|EFC21743.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
          Length = 113

 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++   + R++G        ++   +   +    +  + I+DLS ++ +D+ G   ++   
Sbjct: 9  DSDALMLRYSGEITLEITGDLKRRLDAELE-DAEVKAVIIDLSDVSFMDSSGIGFLVSAN 67

Query: 63 EKYHGKIK 70
           +     +
Sbjct: 68 TRMRSSGR 75


>gi|325204912|gb|ADZ00366.1| conserved hypothetical protein [Neisseria meningitidis
          M01-240355]
          Length = 83

 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              G+     ++  A        +    D+  VDLS +   D+    L++  +    G 
Sbjct: 1  MHIGGDITVKTLT--AAAFTRFRQQCRLKDTCAVDLSGVGRADSACVSLLLEVLRGCKGS 58

Query: 69 IKLQGVSTHIEQLFSLIS 86
          ++L G+   +  L  L  
Sbjct: 59 VRLTGIPESVRALSELYE 76


>gi|319776664|ref|YP_004139152.1| NTP binding protein, contains STAS domain [Haemophilus influenzae
          F3047]
 gi|329124182|ref|ZP_08252729.1| NTP binding protein (contains STAS domain) [Haemophilus aegyptius
          ATCC 11116]
 gi|317451255|emb|CBY87489.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae F3047]
 gi|327467607|gb|EGF13105.1| NTP binding protein (contains STAS domain) [Haemophilus aegyptius
          ATCC 11116]
          Length = 105

 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62
          N        G      +  +     + +++S    + +  +LS +  ID+ G  ++  F+
Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTVLCDFL 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
           +     K   +    +QL +L    
Sbjct: 70 RECQKINKTVRLVYPPKQLLTLADLV 95


>gi|71734111|ref|YP_273088.1| STAS domain-containing protein [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|289626912|ref|ZP_06459866.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi
          str. NCPPB3681]
 gi|71554664|gb|AAZ33875.1| STAS domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|330867350|gb|EGH02059.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi
          str. 0893_23]
 gi|330987695|gb|EGH85798.1| STAS domain-containing protein [Pseudomonas syringae pv.
          lachrymans str. M301315]
 gi|331013008|gb|EGH93064.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci
          ATCC 11528]
          Length = 96

 Score = 42.7 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++   T  +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+   
Sbjct: 7  NQADATRVQIDGELTIYTVTELAARL---LPQITGAARVEVDLSQVTEMDGAGLQLLAVI 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +      
Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFEL 89


>gi|24375437|ref|NP_719480.1| SpoIIAA family protein [Shewanella oneidensis MR-1]
 gi|24350281|gb|AAN56924.1|AE015826_9 SpoIIAA family protein [Shewanella oneidensis MR-1]
          Length = 94

 Score = 42.7 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +    G     ++  +       +++  Q    I+ LS +   D+ G   ++  + ++
Sbjct: 8  GNICHLKGRLSQDQVIALWPQRQSLLSQDTQ----ILSLSELEYSDSAGVAFLLALVRQH 63

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
             ++L   S  +++L  L   
Sbjct: 64 ATPLQLCSASAQLKKLIDLYDL 85


>gi|295838820|ref|ZP_06825753.1| STAS domain-containing protein [Streptomyces sp. SPB74]
 gi|197695366|gb|EDY42299.1| STAS domain-containing protein [Streptomyces sp. SPB74]
          Length = 112

 Score = 42.7 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 1/95 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V    G+       ++ +DVV A+  +    +  +D + +   D++G  +++     
Sbjct: 19  GRVVIALIGDLDYDTAEQLGEDVVTALA-TPGVRALALDCAGLEGCDSMGLAVLLQVRRH 77

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
                    +    + L  L+  T         P 
Sbjct: 78  TDRAGVRLTLERPTDSLRRLLGLTGTSAHFRVGPA 112


>gi|117619997|ref|YP_858372.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561404|gb|ABK38352.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 139

 Score = 42.7 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 6/94 (6%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G    R +G  ++ ++ E+         +        ++L  +T +D+ G  L++ + + 
Sbjct: 46  GTQEMRLSGELQAAQVVELWQRRADWWQED------QIELGDVTTLDSAGLALLVKWAKA 99

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
              +     +       ++L +      +    P
Sbjct: 100 ALARGATPQLVGASTDFYTLANLYGVAGLFQSTP 133


>gi|309378877|emb|CBX22464.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 92

 Score = 42.7 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G+     ++   D+      +    ++  VD   +   D+    L++  + +   
Sbjct: 9  ILHIGGDITVKTLT--EDEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKD 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           I L G+   +  L  L  
Sbjct: 67 SIGLTGIPESVRALSELYE 85


>gi|302189174|ref|ZP_07265847.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae 642]
 gi|330943041|gb|EGH45484.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. pisi str. 1704B]
          Length = 96

 Score = 42.7 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
               +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+     +
Sbjct: 10 DTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVIQRE 66

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
                   ++   + +      
Sbjct: 67 AGKTGTSLHLTGQSKAVSETFEL 89


>gi|84387819|ref|ZP_00990834.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01]
 gi|86147569|ref|ZP_01065879.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222]
 gi|218710666|ref|YP_002418287.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32]
 gi|84377334|gb|EAP94202.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01]
 gi|85834608|gb|EAQ52756.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222]
 gi|218323685|emb|CAV20014.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32]
          Length = 102

 Score = 42.7 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
           +  G+     +  I   +           S  +DLS I  +D+ G  ++++ +E    + 
Sbjct: 15  QLLGDIDRDSVPAIWRILEKW---QTTESSVEIDLSHINRVDSAGMVMLIHLLEHAKNQN 71

Query: 70  KLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
               +S   EQL +L   ++ + +  +  + 
Sbjct: 72  CHIMLSFVPEQLRTLFQLSNIQPMMAEHIKN 102


>gi|257483989|ref|ZP_05638030.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci
          ATCC 11528]
 gi|289650982|ref|ZP_06482325.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi
          str. 2250]
 gi|330890723|gb|EGH23384.1| STAS domain-containing protein [Pseudomonas syringae pv. mori
          str. 301020]
          Length = 100

 Score = 42.7 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++   T  +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+   
Sbjct: 11 NQADATRVQIDGELTIYTVTELAARL---LPQITGAARVEVDLSQVTEMDGAGLQLLAVI 67

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +      
Sbjct: 68 QREAGKTGTSLRMTGQSKAVTETFEL 93


>gi|253686690|ref|YP_003015880.1| hypothetical protein PC1_0285 [Pectobacterium carotovorum subsp.
          carotovorum PC1]
 gi|251753268|gb|ACT11344.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
          carotovorum PC1]
          Length = 98

 Score = 42.7 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--Y 65
               G+     +          +         ++D+S +  +D+ G  L+M+  ++   
Sbjct: 15 TLALTGDLDRETLLPFWQQRESLLM-----GKTVLDVSGLNRVDSAGLALLMHVYQQPSS 69

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
            +I + G S  ++ L +L +   
Sbjct: 70 GREITIVGASDRLKTLIALYNLNE 93


>gi|330900452|gb|EGH31871.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. japonica str. M301072PT]
 gi|330977435|gb|EGH77382.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. aptata str. DSM 50252]
          Length = 100

 Score = 42.7 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
               +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+     +
Sbjct: 14 DTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVIQRE 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
                   ++   + +      
Sbjct: 71 AGKTGTSLHLTGQSKAVSETFEL 93


>gi|256377805|ref|YP_003101465.1| PAS/PAC sensor protein [Actinosynnema mirum DSM 43827]
 gi|255922108|gb|ACU37619.1| putative PAS/PAC sensor protein [Actinosynnema mirum DSM 43827]
          Length = 1017

 Score = 42.7 bits (99), Expect = 0.088,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            + + V    G+     +  + + ++  ++         +DLS +  + + G  L++   
Sbjct: 913 RDAVQVLHLGGDLDLDGVRALREFLLGRVD-VADRRPVELDLSGLGYLSSSGVALLLEAA 971

Query: 63  E 63
           E
Sbjct: 972 E 972


>gi|86739156|ref|YP_479556.1| anti-sigma-factor antagonist domain-containing protein [Frankia sp.
           CcI3]
 gi|86566018|gb|ABD09827.1| anti-sigma-factor antagonist (STAS) domain protein [Frankia sp.
           CcI3]
          Length = 115

 Score = 42.7 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 44/98 (44%), Gaps = 5/98 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +++    V   AG+     +  + + ++ A  +       IVDL  ++ +D+ G  +I++
Sbjct: 5   VTDRDAIVVHPAGDIDYSSLDPLREALLDA--RVAGVKEIIVDLEQVSFLDSQGLAVILF 62

Query: 61  FMEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
             ++     G++ L+ ++    +L  + + +    + +
Sbjct: 63  AHQRQRSAGGRLVLRNLNEDAYRLLHVTNLSAVIDVDH 100


>gi|120402490|ref|YP_952319.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
 gi|119955308|gb|ABM12313.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
          Length = 128

 Score = 42.7 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
           +    V R  G+  +     +   + +A+  +      +VD++ +  + + G  ++    
Sbjct: 19  QGAALVLRVTGDLDAMTAPTLVTHLDIALADAP--PVVVVDMTDVEFLSSAGISVLVETH 76

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
              E+    +++        + F ++       +  
Sbjct: 77  RLAERADISLRVVADGPATSRPFRMMRLDEVIDLYP 112


>gi|121998895|ref|YP_001003682.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1]
 gi|121590300|gb|ABM62880.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1]
          Length = 104

 Score = 42.7 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
          R  G  +   +  +          + +     +DL+ +   D+ G  L++ +  +     
Sbjct: 15 RVTGRLELDTVGALWPQGTALF--TAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHG 72

Query: 70 KLQGVSTHIEQLFSLISFT 88
              +    +QL +++  +
Sbjct: 73 GRLCLCHVPQQLLAIVHAS 91


>gi|319788305|ref|YP_004147780.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1]
 gi|317466817|gb|ADV28549.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1]
          Length = 133

 Score = 42.7 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 41/112 (36%), Gaps = 4/112 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +NG+     +G   +   SE+   +   +    +  S ++DL  +  I + G   +    
Sbjct: 12  QNGVQRIAVSGRLDTGSHSELDHAIDPLLADE-RVSSVVLDLEGLNYISSAGLRSLSRVR 70

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111
               + H  + L      I+++F ++     K +     +   + ++ +   
Sbjct: 71  RALARRHRSVLLINPQPQIQKVFDVVDAVPLKDVFASVEEADQYLDAMQRKL 122


>gi|291449295|ref|ZP_06588685.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291352242|gb|EFE79146.1| predicted protein [Streptomyces roseosporus NRRL 15998]
          Length = 141

 Score = 42.7 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V   +G+     ++ +   +  A +    S   +VDLS +   D+    +++   
Sbjct: 39  EREALVLSVSGDLDIDSVTPLGLALSSAADD--GSGPVVVDLSGVGFADSTTVNVLLQGH 96

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                +++L   S  +++L  +I       +
Sbjct: 97  TALGDRLRLAAPSPFMQRLIGMIGLDSALPV 127


>gi|294497068|ref|YP_003560768.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551]
 gi|295702433|ref|YP_003595508.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319]
 gi|294347005|gb|ADE67334.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551]
 gi|294800092|gb|ADF37158.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319]
          Length = 110

 Score = 42.7 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +      + AG   +    ++ +  +            IVDL+ ++ +D+ G  + +  +
Sbjct: 10 DGQAYRIKLAGEIDAYTAPKLKEKFMEITEH--TEPEIIVDLTDVSYMDSTGLGVFIALL 67

Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
             +K +G +K  GVS  I++LF +   T 
Sbjct: 68 KANKKNNGSLKFVGVSERIKRLFDITGLTD 97


>gi|46579860|ref|YP_010668.1| anti-anti-sigma factor [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|120602674|ref|YP_967074.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4]
 gi|46449276|gb|AAS95927.1| anti-anti-sigma factor, putative [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|120562903|gb|ABM28647.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4]
 gi|311234139|gb|ADP86993.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris RCH1]
          Length = 114

 Score = 42.7 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            + V   +G         +  ++  A++    +D   +DL+ +T +D+ G   ++    
Sbjct: 10 GNVIVAVLSGELTLANAQHLRGELEEALSTQGVTD-VALDLAGVTYLDSSGLGSLIAVST 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89
          +         +    +++  L+    
Sbjct: 69 RARASGCRILLYRPSKEVHKLLDAAQ 94


>gi|297564180|ref|YP_003683153.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296848629|gb|ADH70647.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 118

 Score = 42.7 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+  + V    G        ++ D+++ A+     +   +VD+S +   D+ G  +++  
Sbjct: 9  SQQDVAVVTVGGEIDLYTAPQLRDELIGALED--GARRLVVDMSRVEFCDSTGISVLLSA 66

Query: 62 MEKYHGK 68
          M++   K
Sbjct: 67 MKRSRDK 73


>gi|117929040|ref|YP_873591.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B]
 gi|117649503|gb|ABK53605.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B]
          Length = 135

 Score = 42.7 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 8/105 (7%), Positives = 31/105 (29%), Gaps = 2/105 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +    V    G         + +          +    +VDL+ +  ID+    ++++  
Sbjct: 17  DGDRVVVTLYGELDIANARRLRESFAAL--DDGRESDVVVDLAGVPFIDSTCLAVLLWAS 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
            +     +   +      + + ++ +   +     P+       +
Sbjct: 75  HRSRDSGRRMVLRDPSRGVIAALAASGLLRAFRYDPETLDSVQPW 119


>gi|157148762|ref|YP_001456081.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895]
 gi|157085967|gb|ABV15645.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895]
          Length = 97

 Score = 42.7 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              AG      ++ + D  V A+      D   +DLS ++ +D+ G  L+++ +++   
Sbjct: 13 TLALAGELDQDVLNPLWDARVDAMK-----DVTCIDLSQVSRVDSGGLALLVHLVDQAKR 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +    E++++L   
Sbjct: 68 QGNSVSLQGVNEKVYTLAKL 87


>gi|289664636|ref|ZP_06486217.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          vasculorum NCPPB702]
 gi|289667200|ref|ZP_06488275.1| putative anti-anti-sigma factor [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 109

 Score = 42.7 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISFT 88
             +   ++     +  +I   
Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90


>gi|58581094|ref|YP_200110.1| hypothetical protein XOO1471 [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|84623029|ref|YP_450401.1| hypothetical protein XOO_1372 [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|166711349|ref|ZP_02242556.1| hypothetical protein Xoryp_07750 [Xanthomonas oryzae pv.
          oryzicola BLS256]
 gi|188575613|ref|YP_001912542.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58425688|gb|AAW74725.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|84366969|dbj|BAE68127.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
          MAFF 311018]
 gi|188520065|gb|ACD58010.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 109

 Score = 42.7 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                G       +E+   +  A+   +      +DL A++EIDT G +L++   +   
Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68

Query: 67 GKIKLQGVSTHIEQLFSLISFT 88
             +   ++     +  +I   
Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90


>gi|309388695|gb|ADO76575.1| anti-sigma-factor antagonist [Halanaerobium praevalens DSM 2228]
          Length = 115

 Score = 42.7 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
          E    V +F G       +++ + V   +  + + D  I+DL+ ++ +D+ G  L++   
Sbjct: 11 EANKAVIKFEGEVNFENSNQLKEKVKAELITNEEVDVLIIDLAQVSYLDSSGVGLLLSLF 70

Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84
            M+K  G +K+   +  ++++F +
Sbjct: 71 KFMQKRDGSLKVVNPNAKLKRVFDV 95


>gi|315185595|gb|EFU19364.1| anti-sigma-factor antagonist [Spirochaeta thermophila DSM 6578]
          Length = 130

 Score = 42.7 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 5/110 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
           +    G     +   I D +     +       ++DL  +T ID+ G   ++Y     ++
Sbjct: 13  ILSLTGELDLYQAPRIKDMLQKVFPEHPA--KIVLDLDGLTYIDSSGIGALLYAYSEAKR 70

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
                 L  +   ++++  L    H   I     +      S  +    +
Sbjct: 71  RDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120


>gi|311894138|dbj|BAJ26546.1| putative antagonist protein [Kitasatospora setae KM-6054]
          Length = 123

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 2/90 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R  G      +  + D +  A+         +VD   +   D+ G  L++         
Sbjct: 2  VRPEGELDHDSVGPLRDVLERAVADPP--GRLVVDCGGLDFCDSTGLNLLLRAHGAARRA 59

Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
               ++     L  ++  T   ++ +  P
Sbjct: 60 GVPLLLAAPGPVLGRILEITGADEVLDVHP 89


>gi|307330897|ref|ZP_07610030.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113]
 gi|306883438|gb|EFN14491.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113]
          Length = 150

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 5/89 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+TV   AG         I   +   I         ++DL  +T +D  G  L+     
Sbjct: 36  GGVTVAEIAGELDIFAAGRIVARLDSLIQARC--PDLVLDLRPVTFLDCAGLSLLCRLRN 93

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTH 89
           +     G+++L        +L  ++    
Sbjct: 94  RVLERDGRLRLVIDEPRFVRLLRMVRLDD 122


>gi|283788170|ref|YP_003368035.1| putative anti-sigma factor antagonist [Citrobacter rodentium
          ICC168]
 gi|282951624|emb|CBG91324.1| putative anti-sigma factor antagonist [Citrobacter rodentium
          ICC168]
          Length = 98

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              AG      ++ + D  V A+ +        +DLS I+ +DT G  L+++ +E    
Sbjct: 13 TLMLAGELDQDVLNPLWDARVEAMKEVT-----CIDLSQISRVDTGGLALLVHLIELAKK 67

Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
          +     +    +++++L    +       +P
Sbjct: 68 QGNSVSLQGVNDKVYTLAQLYNLPADVLPRP 98


>gi|323499084|ref|ZP_08104064.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM
           21326]
 gi|323315919|gb|EGA68950.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM
           21326]
          Length = 106

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           I      GN  +         +   I    +     +D S +  +D+ G   I+Y  ++ 
Sbjct: 12  ILTLVINGNLDADGSRNAQPHIDEIIADKSE-REIEIDFSHVQFLDSSGVGAIVYLYKRL 70

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
                 ++++ VS    ++ +L+       + +QK
Sbjct: 71  IERQRSMRIENVSGQPLEIMNLLRIDQAIPVNSQK 105


>gi|309782896|ref|ZP_07677616.1| sulfate transporter/antisigma-factor antagonist STAS [Ralstonia
          sp. 5_7_47FAA]
 gi|308918320|gb|EFP63997.1| sulfate transporter/antisigma-factor antagonist STAS [Ralstonia
          sp. 5_7_47FAA]
          Length = 103

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 6/81 (7%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
             +G     E   +  +    + ++ ++   +  +D + ++++D+    +++ +     
Sbjct: 2  LTLSGPLTHREAPRVLREGEAQLGQAREAGNAALHIDCAGLSQVDSSALAVLLSWQRTAQ 61

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
                 ++   + L +L + 
Sbjct: 62 DAGITLDIAGAPQALSNLATL 82


>gi|241664470|ref|YP_002982830.1| signal peptide protein [Ralstonia pickettii 12D]
 gi|240866497|gb|ACS64158.1| putative signal peptide protein [Ralstonia pickettii 12D]
          Length = 103

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 6/81 (7%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
             +G     E   +  +    + ++ ++   +  +D + ++++D+    +++ +     
Sbjct: 2  LTLSGPLTHREAPRVLREGEAQLGQAREAGNAALHIDCAGLSQVDSSALAVLLSWQRTAQ 61

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
                 ++   + L +L + 
Sbjct: 62 DAGITLDIAGAPQALSNLATL 82


>gi|145627952|ref|ZP_01783753.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 22.1-21]
 gi|144979727|gb|EDJ89386.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 22.1-21]
          Length = 108

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62
          N        G      +  +     + +++S    + +  +LS +  ID+ G   +  F+
Sbjct: 13 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTALCDFL 72

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
           +     K   +    +QL +L    
Sbjct: 73 RECQKINKTVRLVYPPKQLLTLADLV 98


>gi|330468640|ref|YP_004406383.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032]
 gi|328811611|gb|AEB45783.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032]
          Length = 117

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 5/105 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
            G    R AG        E+ + +             ++DL+ +T  D+ G  + +    
Sbjct: 13  GGPARLRLAGELDMSSAPELNEAIDRLAAA--GQRRLLIDLAELTFCDSTGIAVFVRGDN 70

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
              +  G +++ G +  +E++  +          +  P       
Sbjct: 71  RAAEQGGWLRITGATGRVERVLKVTGLADVLGYGSADPGPDDRVG 115


>gi|227358276|ref|ZP_03842617.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906]
 gi|227161612|gb|EEI46649.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906]
          Length = 102

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          +  F G      +  +       +     +D  I+D+S +  ID+ G  L ++    ME 
Sbjct: 18 ILSFQGTLDRETLLPVWQQRKALL-----ADINIIDISQLDHIDSTGLALFVHLKAEMEA 72

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
             +  +QGVS   + L +L     
Sbjct: 73 LERQCVIQGVSERFQTLITLYDLDE 97


>gi|170724538|ref|YP_001758564.1| hypothetical protein Swoo_0168 [Shewanella woodyi ATCC 51908]
 gi|169809885|gb|ACA84469.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
          Length = 98

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78
           I  I            Q++   +D S ++ +DT GA+L+  F +    +          
Sbjct: 13 TIRNIQPVFTQLCELFTQAEILHIDASQLSRVDTAGAQLLHLFSKTCDARSLKVDWLGCQ 72

Query: 79 EQLFSLISFT 88
          + L   +   
Sbjct: 73 DDLLESLGEL 82


>gi|307324605|ref|ZP_07603812.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113]
 gi|306889849|gb|EFN20828.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113]
          Length = 161

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 2/100 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V    G         ++  +  A+  S +     VDLS +   D  G   ++   
Sbjct: 51  EGPRKVVVVWGEVDYETAPALSAVLHEALRASAEG--VDVDLSGVAFWDCSGLNALLRLR 108

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
            +     K   V +    +  +++ T    +         
Sbjct: 109 REALAHGKTVTVRSPSRMVRRVLTLTGTSPLFLPPRPCRR 148


>gi|304413075|ref|ZP_07394548.1| cytoplasmic protein with a STAS domain [Candidatus Regiella
          insecticola LSR1]
 gi|304283918|gb|EFL92311.1| cytoplasmic protein with a STAS domain [Candidatus Regiella
          insecticola LSR1]
          Length = 98

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 35/86 (40%), Gaps = 9/86 (10%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM----EK 64
              G+     +  +       +     +D   +D++ +  +D+ G  L+++ +    ++
Sbjct: 14 LLLQGDLDRDTLLPLWQQRNKLL-----TDIDCIDVTQLHRVDSAGLALLVHLIHFKSQQ 68

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHR 90
           + K+ + G+S  +  L  L +   R
Sbjct: 69 QNIKLAISGISDQLATLIKLYNLPGR 94


>gi|68249640|ref|YP_248752.1| NTP binding protein, contains STAS domain [Haemophilus influenzae
          86-028NP]
 gi|145630174|ref|ZP_01785956.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae R3021]
 gi|145636465|ref|ZP_01792133.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittHH]
 gi|145638103|ref|ZP_01793713.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittII]
 gi|145640768|ref|ZP_01796351.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae R3021]
 gi|148826303|ref|YP_001291056.1| NTP binding protein, contains STAS domain [Haemophilus influenzae
          PittEE]
 gi|148828245|ref|YP_001292998.1| NTP binding protein, contains STAS domain [Haemophilus influenzae
          PittGG]
 gi|260581864|ref|ZP_05849660.1| NTP binding protein [Haemophilus influenzae NT127]
 gi|319897437|ref|YP_004135634.1| ntp binding protein, contains stas domain [Haemophilus influenzae
          F3031]
 gi|68057839|gb|AAX88092.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 86-028NP]
 gi|144984455|gb|EDJ91878.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae R3021]
 gi|145270290|gb|EDK10225.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittHH]
 gi|145272432|gb|EDK12339.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittII]
 gi|145274694|gb|EDK14557.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 22.4-21]
 gi|148716463|gb|ABQ98673.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittEE]
 gi|148719487|gb|ABR00615.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittGG]
 gi|260095057|gb|EEW78949.1| NTP binding protein [Haemophilus influenzae NT127]
 gi|301169824|emb|CBW29428.1| predicted protein [Haemophilus influenzae 10810]
 gi|309751269|gb|ADO81253.1| Phospholipid ABC transporter, predicted auxiliary component
          [Haemophilus influenzae R2866]
 gi|309973446|gb|ADO96647.1| Phospholipid ABC transporter, predicted auxiliary component
          [Haemophilus influenzae R2846]
 gi|317432943|emb|CBY81310.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae F3031]
          Length = 105

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62
          N        G      +  +     + +++S    + +  +LS +  ID+ G   +  F+
Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTALCDFL 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
           +     K   +    +QL +L    
Sbjct: 70 RECQKINKTVRLVYPPKQLLTLADLV 95


>gi|241759036|ref|ZP_04757148.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|241320857|gb|EER57090.1| conserved hypothetical protein [Neisseria flavescens SK114]
          Length = 92

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    ++  +D S + + D+    L++  + +   
Sbjct: 9  TLYISGDVTVKTLT--ASAFARYEQQCRLKETDRIDFSQVGKADSACVSLLLNALRRTDK 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 67 KPTIQNIPDSVRALAELYE 85


>gi|282865602|ref|ZP_06274653.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|282559646|gb|EFB65197.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
          Length = 128

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 1/73 (1%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME 63
          G    R  G+       E+A      +    +     +D + +   D++G A L++    
Sbjct: 18 GTARLRLTGDLDYDTSGELARAAEECLAADPRLADLHLDCAQLRLCDSMGVATLLLIHRG 77

Query: 64 KYHGKIKLQGVST 76
               ++L   S 
Sbjct: 78 TTARGVRLHVESP 90


>gi|17547676|ref|NP_521078.1| putative signal peptide protein [Ralstonia solanacearum GMI1000]
 gi|17429980|emb|CAD16664.1| hypothetical signal peptide protein [Ralstonia solanacearum
           GMI1000]
          Length = 115

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/99 (9%), Positives = 35/99 (35%), Gaps = 2/99 (2%)

Query: 10  RFAGNWKSPEISEIADDVVMAI--NKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
             +G     E   +  +    +   + + + +  VD + ++++D+    +++ +      
Sbjct: 14  TLSGPLTHREAPRVLREGEAQLGQARQVGTAAVRVDCAGLSQVDSSALAVLLSWQRTAQA 73

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                 ++   E L +L +      +    P  +  ++ 
Sbjct: 74  AGIALDITAAPEALRNLATLYGVDTLLAVAPATTASHHP 112


>gi|255526138|ref|ZP_05393059.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7]
 gi|296187148|ref|ZP_06855545.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7]
 gi|255510187|gb|EET86506.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7]
 gi|296048183|gb|EFG87620.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7]
          Length = 111

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          S++G  +   +G        E+ + +   +++       I+D S +  +D+ G  +++
Sbjct: 7  SKDGKLIVHMSGELDHHSAEEVRNKIDDRLDRD-NIGKLIMDFSDVNFMDSSGIGVVI 63


>gi|145221622|ref|YP_001132300.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK]
 gi|315446641|ref|YP_004079520.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1]
 gi|145214108|gb|ABP43512.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK]
 gi|315264944|gb|ADU01686.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1]
          Length = 115

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 1/105 (0%)

Query: 5   GITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           G +   R AG+        + D V   +      +   +D S +   D+ G   ++    
Sbjct: 11  GRSTSVRVAGDLDYGTTRLLVDTVSDLLTGGKVPEELHLDFSDLAFCDSAGLSGLVMIHR 70

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
           +         +     QL  +++ T         P  +   +   
Sbjct: 71  RTSAAGVRLHLDDRPAQLERILTITGLLDFLTATPAEASDESVIG 115


>gi|21226007|ref|NP_631786.1| hypothetical protein SCO7750 [Streptomyces coelicolor A3(2)]
 gi|256782939|ref|ZP_05521370.1| hypothetical protein SlivT_00450 [Streptomyces lividans TK24]
 gi|289766821|ref|ZP_06526199.1| anti-sigma-factor antagonist [Streptomyces lividans TK24]
 gi|12311740|emb|CAC22758.1| hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|289697020|gb|EFD64449.1| anti-sigma-factor antagonist [Streptomyces lividans TK24]
          Length = 137

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 7/105 (6%), Positives = 24/105 (22%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                   G+        +  +V   ++         +  + +  +D++G   ++    +
Sbjct: 18  DSLRIEVRGDLDYASADLLVAEVTAGLSGQPALTDLHLSCAGLGAVDSMGLSALLMIGRR 77

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
                    +      L  L+  T   +                 
Sbjct: 78  TTAAGVRLHLDDRPANLNRLLELTGTLEHLTAPSPVGAEETPGTG 122


>gi|312881885|ref|ZP_07741652.1| putative anti-sigma B factor antagonist [Vibrio caribbenthicus
          ATCC BAA-2122]
 gi|309370464|gb|EFP97949.1| putative anti-sigma B factor antagonist [Vibrio caribbenthicus
          ATCC BAA-2122]
          Length = 100

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
           AG+     +  + DD+     +     S  + LS +  +D+ G  ++++ +E    +  
Sbjct: 16 LAGDLTRDTVPGLWDDLQTLTFEQS---SLTISLSGVLRVDSSGMVMLIHLLEHAKKQNC 72

Query: 71 LQGVSTHIEQLFSLISFTHRKKI 93
             +S   +QL +L + +  +++
Sbjct: 73 HIMLSFVPQQLMTLAALSSAEEL 95


>gi|229818799|ref|YP_002880325.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
 gi|229564712|gb|ACQ78563.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
          Length = 124

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 3/100 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G  V R    W   + +   D               ++D   +T ID+ G   I+   +
Sbjct: 17  GGGVVIRI---WGEVDAALRDDASAAMAAVLADPGPVVIDARDVTFIDSTGLAFILQLHK 73

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103
               + +   +     +L  L+       +   +      
Sbjct: 74  HGSEESREVVLRDPAPRLTELLELAAVGDLVRVERTPVPP 113


>gi|269125130|ref|YP_003298500.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268310088|gb|ACY96462.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 120

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          +NG+ + + +G         + + ++  I+K       +VDLS +T +D+ G  +++   
Sbjct: 10 DNGVNIVKVSGEIDVFSSPRLREMLLDVIDKGPL--RLVVDLSDVTFLDSTGLGVLVGIY 67

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFT 88
          + +   +G +   G +  + ++F +   T
Sbjct: 68 HRLRARNGSMSFVGANDRVRRVFHITQLT 96


>gi|330468643|ref|YP_004406386.1| sulfate transporter/antisigma-factor antagonist stas
          [Verrucosispora maris AB-18-032]
 gi|328811614|gb|AEB45786.1| sulfate transporter/antisigma-factor antagonist stas
          [Verrucosispora maris AB-18-032]
          Length = 118

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+  + V R  G+      S +  ++   +       + ++D + +  ID+ G  +I++ 
Sbjct: 6  SDPDMPVIRVGGDLAYTTASPLRSEIDRELQAGPA--TLVLDFANLQFIDSTGLSIIVHT 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
            +         +      L +++  T
Sbjct: 64 WREGLRDGVTLRLRAVPRFLETILDMT 90


>gi|302555986|ref|ZP_07308328.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM
           40736]
 gi|302473604|gb|EFL36697.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM
           40736]
          Length = 160

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G TV  F G       SEIA  +    ++   +   ++DLS I   D  G  L+    
Sbjct: 51  ERGHTVLEFCGEIDLAAASEIAPHLDRETDR--PAARVVIDLSGIEFFDCSGLRLLYRAR 108

Query: 63  EK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
            +     G + L        ++  +   +     + 
Sbjct: 109 SRVLDRDGHLLLVCAHPLTLRVLRITGLSRLLPPQP 144


>gi|258405515|ref|YP_003198257.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692]
 gi|257797742|gb|ACV68679.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692]
          Length = 114

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           NG+    ++G       S++ + +  A+       + ++DLS    +D+ G   ++   
Sbjct: 9  RNGVCQVTYSGELTLEVTSQLKERIEQALENE-HCQALVMDLSETVFLDSSGIGFLVSLN 67

Query: 63 EKYHGK 68
          +K   +
Sbjct: 68 KKMRQQ 73


>gi|152964453|ref|YP_001360237.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216]
 gi|151358970|gb|ABS01973.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216]
          Length = 122

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E G TV   +G         + + +   +         +VD+  +  +D+ G  +++  +
Sbjct: 10 EGGRTVVEVSGEIDVYTAPTLRERLNELVGA--GHHHLVVDMEGVEFLDSTGLGVLVGGL 67

Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86
          ++         +    E++  +  
Sbjct: 68 KRVRSHDGSLHLVCQREKILKVFR 91


>gi|290955149|ref|YP_003486331.1| anti-sigma-factor antagonist [Streptomyces scabiei 87.22]
 gi|260644675|emb|CBG67760.1| putative anti-sigma-factor antagonist [Streptomyces scabiei 87.22]
          Length = 122

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 36/95 (37%), Gaps = 1/95 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           + I V    G     ++ ++ ++ ++    +      +VDL  +T +D+ G  +++    
Sbjct: 21  DDIRVVTMRGEID-HDVKDLFEEALLTGGVAAPPPRIVVDLGGVTFMDSSGINVLVAAHR 79

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +  G+     ++   E +  ++            P
Sbjct: 80  RVSGERGWLRIAAAQESVLRVLQLVGVDTFIPCHP 114


>gi|29826775|ref|NP_821409.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29603871|dbj|BAC67944.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
           MA-4680]
          Length = 162

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           +GI +    G         + + +   I +       + D   +T +D+ G  +++    
Sbjct: 62  DGIRIVVLRGEIDHANRDSLHEAL--LIPEGEAEPRTVADFRGVTFMDSSGINVLITAHR 119

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLI 85
             +   G ++L GV   ++++ +L+
Sbjct: 120 AAQDAGGWLRLAGVQEPVQRVLALV 144


>gi|310643957|ref|YP_003948715.1| anti-sigma factor antagonist [Paenibacillus polymyxa SC2]
 gi|309248907|gb|ADO58474.1| Anti-sigma factor antagonist [Paenibacillus polymyxa SC2]
          Length = 112

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + +G+     +G      ++     V+  +      D  IV+L  +  ID+ G  +++  
Sbjct: 15 TADGVNTVYLSGELDL-SVAPDFRLVMEPLVGESSQD-LIVNLRDLKYIDSTGIGILLSI 72

Query: 62 MEKYHG---KIKLQGVSTHIEQLFSL 84
          ++  HG   +  +Q V   I++LF +
Sbjct: 73 LKARHGMESRFTVQEVPPQIQKLFDM 98


>gi|308069567|ref|YP_003871172.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
 gi|310642624|ref|YP_003947382.1| anti-sigma f factor antagonist [Paenibacillus polymyxa SC2]
 gi|305858846|gb|ADM70634.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
          [Paenibacillus polymyxa E681]
 gi|309247574|gb|ADO57141.1| Anti-sigma F factor antagonist [Paenibacillus polymyxa SC2]
          Length = 117

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
          G+ + R +G         +   +  AI +  Q +  ++ L  +  +D+ G  +I+     
Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          +++  GK+ +  V+  + +L  +
Sbjct: 71 IKQKGGKMAVCDVNPPVHRLLDM 93


>gi|283852491|ref|ZP_06369759.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
 gi|283572099|gb|EFC20091.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B]
          Length = 111

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
              AG         + + ++  + ++ +  +  +D++ ++ ID+ G  L++   +     
Sbjct: 23  VTLAGEIDFSVTPAVRERLLALVGETPE--TITLDMADLSYIDSSGLALLIELRKHLAES 80

Query: 66  HGKIKLQGVSTHIEQLFSLISF 87
             K+ ++ +S  + +LF+L   
Sbjct: 81  GRKVAIRSLSPQVRKLFNLTQL 102


>gi|302538106|ref|ZP_07290448.1| anti-sigma factor antagonist [Streptomyces sp. C]
 gi|302447001|gb|EFL18817.1| anti-sigma factor antagonist [Streptomyces sp. C]
          Length = 121

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
          +G  +    G       + + + +  A  +       +VD++ +   D+ G   +++   
Sbjct: 18 DGAVLLTLGGELDHDTAAPLKEALDAAARR---GGRLLVDMAGLRFCDSTGLNALLHGRL 74

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           +++  G ++L G++  + ++F +
Sbjct: 75 AVQEAGGSLELAGLTGPVARMFRI 98


>gi|83646437|ref|YP_434872.1| anti-anti-sigma regulatory factor [Hahella chejuensis KCTC 2396]
 gi|83634480|gb|ABC30447.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Hahella chejuensis KCTC 2396]
          Length = 88

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              G       +E    ++             +DLS +TE+D  G +L++        +
Sbjct: 14 LTLNGELTIYCAAEAKAPLLEH-------KDIDIDLSQLTELDGAGLQLLILAKRDRGAR 66

Query: 69 IKLQGVSTHIEQLFSLISFTH 89
            L   S  + ++FSL     
Sbjct: 67 --LVNASEAVNKVFSLTGLAD 85


>gi|271962372|ref|YP_003336568.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
          roseum DSM 43021]
 gi|270505547|gb|ACZ83825.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor)-like protein [Streptosporangium roseum DSM
          43021]
          Length = 121

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMA-INKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          S  G  V R  G            ++  A  + + +S + ++DL+ +T  D+ G   +++
Sbjct: 15 SHGGAIVVRAVGELDYDYAPTFRRELTQAWTSGTGESPTLVLDLTGLTFCDSTGLAELLW 74

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85
           + +         ++     L  ++
Sbjct: 75 MLRRSQESGTRLVLAGVSRTLRHML 99


>gi|222055351|ref|YP_002537713.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32]
 gi|221564640|gb|ACM20612.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32]
          Length = 120

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            V + +G      + E+   ++ A+      +   +DL+ +TE+D  G +L+     
Sbjct: 17 ALVVKVSGPLTVQNVGELKTSLLQALE---GGEQLCLDLAGVTEVDLAGLQLLCSAHR 71


>gi|120600240|ref|YP_964814.1| SpoIIAA family protein [Shewanella sp. W3-18-1]
 gi|146291830|ref|YP_001182254.1| SpoIIAA family protein [Shewanella putrefaciens CN-32]
 gi|120560333|gb|ABM26260.1| SpoIIAA family protein [Shewanella sp. W3-18-1]
 gi|145563520|gb|ABP74455.1| SpoIIAA family protein [Shewanella putrefaciens CN-32]
 gi|319425065|gb|ADV53139.1| phospholipid transport-associated protein, MlaB [Shewanella
          putrefaciens 200]
          Length = 94

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TV    G     ++  +       ++   Q    ++ LS +   D+ G   ++  + ++ 
Sbjct: 9  TVCHLKGRLSQTQVIALWSQRHSLLSPQTQ----VLSLSGLEYSDSAGVAFLLALVSEHK 64

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
            + L   S  +++L  L   
Sbjct: 65 TPLALSSASQQLKKLIDLYDL 85


>gi|294634667|ref|ZP_06713200.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685]
 gi|291091913|gb|EFE24474.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685]
          Length = 100

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            T+ R  G      + E                   +D+S +T +D+ G  L+++    
Sbjct: 11 DGTILRLHGELVCDALGEFWRQRQALFQ-----GINCLDISGVTRVDSAGLALLLHVQNL 65

Query: 65 YHG-KIKLQGVSTHIEQLFSLISFTHRKKIKN 95
            G  + L+GVS  +  L +L +       ++
Sbjct: 66 CPGTPLPLRGVSDRLHTLIALYNLHEIVLCES 97


>gi|159038342|ref|YP_001537595.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205]
 gi|157917177|gb|ABV98604.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205]
          Length = 178

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 16  KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75
            +  +  +   +  A          +VDLSA+ +ID++G  L++   ++   +     + 
Sbjct: 86  SAAAVDPLRTALTEATE---HEGRVVVDLSAVEQIDSVGLGLLVRARQEARQRGAELCLH 142

Query: 76  THIEQLFSLISFTH 89
                + +++    
Sbjct: 143 APSRFVLTVLHTMR 156


>gi|182436852|ref|YP_001824571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178465368|dbj|BAG19888.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 151

 Score = 41.9 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           +   TV R +G         +   V  A+ +       ++DLS +   D+ G  +++   
Sbjct: 37  QGSWTVLRMSGELDLVTSPVVRQSVHEAVAE--GQHDVVLDLSEVFFCDSSGVGVLIASR 94

Query: 60  YFMEKYHGKIKLQ 72
             M+   G+++L 
Sbjct: 95  RLMKSCGGRLRLV 107


>gi|30019157|ref|NP_830788.1| anti-sigma B factor antagonist [Bacillus cereus ATCC 14579]
 gi|229126410|ref|ZP_04255425.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4]
 gi|29894700|gb|AAP07989.1| Anti-sigma B factor antagonist [Bacillus cereus ATCC 14579]
 gi|228656990|gb|EEL12813.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4]
          Length = 112

 Score = 41.9 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +G    +  G   +   S++ + ++     S +    +VD   +  +D+ G  + + 
Sbjct: 9  LQNDGGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVQIVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|307243395|ref|ZP_07525552.1| STAS domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306493205|gb|EFM65201.1| STAS domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 105

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +++   V    G       +++ +++  A+++       ++D++ +  ID+ G  +++  
Sbjct: 11 NDSNEWVVALNGELDISCANKLKEELYKAVDEKFAD--VVIDMTNLEYIDSTGIGVLVGL 68

Query: 62 MEKYHGKIKLQGVS 75
          M+K     K   +S
Sbjct: 69 MKKLRTDGKDIKIS 82


>gi|319951120|ref|ZP_08024969.1| glutaminase [Dietzia cinnamea P4]
 gi|319435213|gb|EFV90484.1| glutaminase [Dietzia cinnamea P4]
          Length = 418

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 3/96 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G   FR  G        ++   +              +DLS ++ ++T    +++  M 
Sbjct: 326 SGRRTFRLQGPMTFASAEQV---LRRLAEIPEGPGEVTLDLSRVSSVNTSARRMLLEAMR 382

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           +   +    G++    +L         + +  +  +
Sbjct: 383 RLSAEGHTVGLADPGRRLPEPDLGDGTRPVTRRAAR 418


>gi|221134180|ref|ZP_03560485.1| putative anti-sigma F factor antagonist [Glaciecola sp. HTCC2999]
          Length = 108

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +        G+  +     +  + V  + +S       +DL  +  ID+ G  L+++  +
Sbjct: 9  DNKLTIHLTGDLDAQGCETLRGEFV-TLAESPSFALVDIDLEHVDFIDSSGIGLVVFLFK 67

Query: 64 KYHGK---IKLQGVSTHIEQLFSLIS 86
          K   +   + +  + +   +L  L+ 
Sbjct: 68 KLRTQEVDLSIVNIHSQPLELIKLLR 93


>gi|257057452|ref|YP_003135284.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Saccharomonospora viridis DSM 43017]
 gi|256587324|gb|ACU98457.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Saccharomonospora viridis DSM 43017]
          Length = 105

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++      R +G         + + +  +I+  + +    +DLS ++ ID+ G  ++   
Sbjct: 10 AQGSTIEIRLSGEIDLSNSDAVREKIFASISNHLVA--VTLDLSEVSYIDSAGLRVLFAL 67

Query: 62 MEKYH 66
           E+  
Sbjct: 68 TERLR 72


>gi|78222299|ref|YP_384046.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15]
 gi|78193554|gb|ABB31321.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15]
          Length = 111

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 28/88 (31%), Gaps = 4/88 (4%)

Query: 5  GITVFRFAGNWKSP----EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          G    R  G+W       ++  + + +        Q    ++D++ +   D  G +L+  
Sbjct: 7  GTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACGCQLLTI 66

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88
           +           ++    +L   I   
Sbjct: 67 LLRHLRLLGFSPVLANIPAELRGSIELL 94


>gi|300718602|ref|YP_003743405.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661]
 gi|299064438|emb|CAX61558.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661]
          Length = 98

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
                +G  +   +  +         +++      +D+S +  +D+ G  L+++  +  
Sbjct: 11 ANQLHLSGELQRETLLALWKQ-----RETVMKQIDTIDVSELDRVDSAGLALLVHLRQIA 65

Query: 64 -KYHGKIKLQGVSTHIEQLFSLISF 87
           +     +  G++  +  L +L + 
Sbjct: 66 LQQGKAPQFTGINDKLHSLITLYNL 90


>gi|71906780|ref|YP_284367.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
 gi|71846401|gb|AAZ45897.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
          Length = 101

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             + +       E+   ++ A+  +   +   ++L+ ++E+DT G +L++   ++    
Sbjct: 7  LVISDDLTIYHALELKPVLLNALAAT---NELELNLAQVSEMDTAGLQLLILLKKEAQKT 63

Query: 69 IKLQGVSTHIEQLFSLISF 87
           K   +  H + + S+I F
Sbjct: 64 GKCVRIVAHSQAVSSVIDF 82


>gi|311900243|dbj|BAJ32651.1| putative antagonist protein [Kitasatospora setae KM-6054]
          Length = 122

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V   AG+     ++   + + + + +  ++   IVDL  +   D+ G  L++      
Sbjct: 22  AAVCALAGDLDIETLAPAREALDLLVAELPRA--LIVDLGRVDFCDSSGLNLLLQTRMAA 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                   ++     +  L+  T  K +
Sbjct: 80  ADGELPFHLAALSGPVRHLLELTGAKAV 107


>gi|127514228|ref|YP_001095425.1| anti-sigma-factor antagonist [Shewanella loihica PV-4]
 gi|126639523|gb|ABO25166.1| anti-sigma-factor antagonist [Shewanella loihica PV-4]
          Length = 97

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           + +G      + E+   +   ++ +       +DL+ ++  D+ G  L+++ + +   K
Sbjct: 11 CQVSGELSQAAVVELWPKLETLLDGACD----RLDLAGVSYSDSAGVALLLHLVAEQQKK 66

Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           +   +     QL  LI     +    ++ +
Sbjct: 67 GQSLVLCNPPAQLQKLIDLYDLQDFFTEEAK 97


>gi|294632658|ref|ZP_06711218.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292835991|gb|EFF94340.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 144

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 5/111 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V  F G         I   +     +  +    ++DLS +   D  G  L+     +
Sbjct: 37  GHIVLEFRGEIDIAAAERITPFLDRVTGR--REARVVIDLSGVDFFDCSGLRLLYRARAR 94

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115
               +  +G    +      +       +    P R     + +      G
Sbjct: 95  L---LDREGELRLVCTHPLTLRVLKVTGLARLLPPRPTLEAALERPQARSG 142


>gi|261405988|ref|YP_003242229.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10]
 gi|329929790|ref|ZP_08283466.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5]
 gi|261282451|gb|ACX64422.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10]
 gi|328935768|gb|EGG32229.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5]
          Length = 117

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          + + R +G         +   +  AI +  Q++  ++ L  +  +D+ G  +I+    F+
Sbjct: 13 VLIVRLSGELDHHTADHVRMQLDEAIQRR-QTEHLVLSLKDLDFMDSSGLGVILGRYKFI 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++  GK+ +  V   + +L  +
Sbjct: 72 KQKGGKMAVCDVKPQVYRLLDM 93


>gi|118465979|ref|YP_879574.1| hypothetical protein MAV_0285 [Mycobacterium avium 104]
 gi|118167266|gb|ABK68163.1| hypothetical protein MAV_0285 [Mycobacterium avium 104]
          Length = 274

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 8/111 (7%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               +    G+W +P+ + +      A        +A   L    +IDT  A L+    E
Sbjct: 89  EAACLLMLNGDWTAPQYALLRAAYESA-------GAATW-LLQPGDIDTRLARLLWQHRE 140

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
            +    K  G +           +      +     R+     F+NL   I
Sbjct: 141 SWRYSTKAYGGTPLDHDREERQRWADDAAARLGIDLRAGRSGGFENLIEEI 191


>gi|213857282|ref|ZP_03384253.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 84

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
           AG      ++ + D  V A+N         +DLS I+ +DT G  L+ + + +   +  
Sbjct: 2  LAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKKQGN 56

Query: 71 LQGVSTHIEQLFSLISF 87
             +S   +++++L   
Sbjct: 57 AVSLSGVNDKVYALAQL 73


>gi|322834658|ref|YP_004214685.1| anti-sigma-factor antagonist [Rahnella sp. Y9602]
 gi|321169859|gb|ADW75558.1| anti-sigma-factor antagonist [Rahnella sp. Y9602]
          Length = 104

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              G      +    D     + + + S    +D+S +  +D+ G   +++  E+   +
Sbjct: 14 LMLHGELDRETLVAFWD-----MRRKLMSGVTCLDVSGLERVDSSGLAFLVHLREEARQQ 68

Query: 69 IKLQGVSTHIEQLFSLISF 87
               ++   ++L +LI+ 
Sbjct: 69 GITLTIAGITDRLRTLITL 87


>gi|299065478|emb|CBJ36647.1| conserved protein of unknown function, STAS domain [Ralstonia
           solanacearum CMR15]
          Length = 104

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 36/100 (36%), Gaps = 2/100 (2%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
              +G     E   +  +    + ++ Q+   +  VD + ++++D+    +++ +     
Sbjct: 2   LTLSGPLTHCEAPRVLREGEAQLGQARQAGIAAVQVDCAGLSQVDSSALAVLLSWQRTAQ 61

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                  ++   E L +L +      +    P  +  ++ 
Sbjct: 62  AAGIALDIAAAPEALRNLATLYGVDTLLAVAPATTASHHP 101


>gi|295097678|emb|CBK86768.1| Predicted NTP binding protein (contains STAS domain)
          [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 97

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 8/93 (8%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-- 62
                  G      ++ + D        +      ++DL  +T +DT G  L+ + +  
Sbjct: 10 DGETLTLTGELDQDLLNPLWDA-----RHNAMQGVTLIDLHGVTRVDTAGIALLAHLVAT 64

Query: 63 -EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           +K    + L GVS ++  L  L +       +
Sbjct: 65 GKKQGSSVTLTGVSDNVITLAQLYNLPEDVLPR 97


>gi|114776921|ref|ZP_01451964.1| anti-sigma factor antagonist, putative [Mariprofundus
          ferrooxydans PV-1]
 gi|114553007|gb|EAU55438.1| anti-sigma factor antagonist, putative [Mariprofundus
          ferrooxydans PV-1]
          Length = 109

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
          +N   + R  G+        + +++    + S++     +D   +  +D+ G   +   +
Sbjct: 13 DNQAVLLRVKGDVTIHTSPRLREELKPLFSASMKEVHVALD--DVGFMDSSGIATLVEGL 70

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISF 87
           +     G   L G+S ++  +F L   
Sbjct: 71 QWARMTGGHFVLSGLSENVRDVFELAKL 98


>gi|31789384|gb|AAP58501.1| putative anti-sigma factor antagonist [uncultured Acidobacteria
           bacterium]
          Length = 118

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
           +G+T+    G     E  E+  D + ++ +  +    +++L  +  ID+ G   I+    
Sbjct: 14  DGVTILDLKGKMTLGEGDELLKDKINSLIQQDR-KKLLLNLEGVPYIDSAGLGEIVRTYT 72

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
            + +  GK+KL  ++  I+ L ++       +    +P 
Sbjct: 73  TVSRQGGKLKLLNLTKRIQDLLAITKLLTVFETYESEPD 111


>gi|89099053|ref|ZP_01171932.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Bacillus sp. NRRL B-14911]
 gi|89086183|gb|EAR65305.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Bacillus sp. NRRL B-14911]
          Length = 116

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          N +   R +G        E+ +    AI  S      +++L  ++ +D+ G  +I+    
Sbjct: 11 NDVLCIRLSGELDHHSADELREKATNAIE-SYGIRHIVLNLEQLSFMDSSGLGVILGRYK 69

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           +++ HG++ +  +S  +++LF +
Sbjct: 70 QIKQLHGEMVVCAISPAVQRLFDM 93


>gi|284992002|ref|YP_003410556.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160]
 gi|284065247|gb|ADB76185.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160]
          Length = 141

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 6/86 (6%), Positives = 24/86 (27%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +  +      G         +   +   +          +DL A T +++ G  +++   
Sbjct: 30  DGDVATLTLGGELTEGARRPLVRTMTDLMLGRPHLRRVRLDLRAATYLNSAGMAVLVQLQ 89

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFT 88
           +    +     +      +   +  +
Sbjct: 90  KLGQPRGVDVALVAPPVAVARPLQLS 115


>gi|77166235|ref|YP_344760.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus
           oceani ATCC 19707]
 gi|254435658|ref|ZP_05049165.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27]
 gi|76884549|gb|ABA59230.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus
           oceani ATCC 19707]
 gi|207088769|gb|EDZ66041.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27]
          Length = 123

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 2/101 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
            FR  G      + E+A+  +   N+        +DL  ++  D+ G  L++ ++     
Sbjct: 12  HFRIVGELTFNTVPEVAEKGLALFNE--AGADLRIDLREVSRTDSAGLALLIAWLRYAKK 69

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
           + K         Q+ ++   +   +I     +++       
Sbjct: 70  ENKSLQFLNIPAQMLAIAQISSLDQILPLGEEQALDQPPLA 110


>gi|296130799|ref|YP_003638049.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
 gi|296022614|gb|ADG75850.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
          Length = 139

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
             T    +G   +    E+ +    A  + +      VD   +T +D+ G   +     +
Sbjct: 37  DRTRIVLSGEVDADLGPELQEATAEAEERGLP---IEVDAHHVTFMDSSGVAFLARLSIR 93

Query: 65  YHGKIKLQGVSTHIEQLFSLIS 86
              +++L  V   +  L  +  
Sbjct: 94  SEHRVRLLRVPPTVRFLLEVTR 115


>gi|256379408|ref|YP_003103068.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255923711|gb|ACU39222.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 118

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 2/96 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+G+ V   +G   +    E+A  +   +     + S +VDL  +  + + G E ++   
Sbjct: 16  EDGVVVLHVSGELDTTSADELARPLKAHLG--GGARSVVVDLGGVRFLGSAGLESLVMGR 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +    +     +          +  T    +   KP
Sbjct: 74  KLAEEQGVELALVASSRSALRPLQATGLDSVFTIKP 109


>gi|297197210|ref|ZP_06914607.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197717540|gb|EDY61574.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 112

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/83 (8%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V   +G      ++E+ + +     +       ++D+S +   D+ G   ++      
Sbjct: 14 GPVLELSGELDYANVAELHEVLDGRALR--AGRCLVLDMSGLEFCDSSGITALIAARSNA 71

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
                  ++     +  ++   
Sbjct: 72 QAVQADVALAAVPPNILRVLRIV 94


>gi|28899434|ref|NP_799039.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153839281|ref|ZP_01991948.1| YrbB protein [Vibrio parahaemolyticus AQ3810]
 gi|260363397|ref|ZP_05776249.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           K5030]
 gi|260879332|ref|ZP_05891687.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           AN-5034]
 gi|260900282|ref|ZP_05908677.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           AQ4037]
 gi|28807670|dbj|BAC60923.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149747182|gb|EDM58170.1| YrbB protein [Vibrio parahaemolyticus AQ3810]
 gi|308093101|gb|EFO42796.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           AN-5034]
 gi|308107580|gb|EFO45120.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           AQ4037]
 gi|308111162|gb|EFO48702.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           K5030]
          Length = 106

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G      +  +                    L  I  +D+ G  ++++ +E    
Sbjct: 14  TLTLTGALDRDSVPSLWAFAQQW---KPSQKELECSLEEIERVDSAGMVMLIHLLEHAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  + 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIKN 103


>gi|56459518|ref|YP_154799.1| STAS domain-containing protein [Idiomarina loihiensis L2TR]
 gi|56178528|gb|AAV81250.1| STAS domain [Idiomarina loihiensis L2TR]
          Length = 97

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +S++      F+G+     ++++                  VDL+ +  IDT G   ++ 
Sbjct: 7  VSDD--KTLVFSGSLTRHSVAKLWSQR----KSWSVGSETRVDLTDVEVIDTAGVAFLLE 60

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
           ++               EQL  +  
Sbjct: 61 ILKLVGDGKGPLTCIGASEQLKQIAR 86


>gi|261819646|ref|YP_003257752.1| hypothetical protein Pecwa_0292 [Pectobacterium wasabiae WPP163]
 gi|261603659|gb|ACX86145.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
          Length = 96

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64
          +     G+     +          +     ++   +D+S +  +D+ G  L+M+  ++  
Sbjct: 12 STLALIGDLDRETLLPFWQQRESLL-----AEKTTLDVSGLNRVDSAGLALLMHVYQQPY 66

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
             +I + G S  ++ L +L +   
Sbjct: 67 SGDEITIVGASDRLKTLIALYNLNE 91


>gi|197287462|ref|YP_002153334.1| anti-sigma factor antagonist [Proteus mirabilis HI4320]
 gi|194684949|emb|CAR47142.1| putative anti-sigma factor antagonist [Proteus mirabilis HI4320]
          Length = 97

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          +  F G      +  +       +     +D  I+D+S +  ID+ G  L ++    ME 
Sbjct: 13 ILSFQGTLDRETLLPVWQQRKALL-----ADINIIDISQLDHIDSTGLALFVHLKAEMEA 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
             +  +QGVS   + L +L     
Sbjct: 68 LERQCVIQGVSERFQTLITLYDLDE 92


>gi|319638898|ref|ZP_07993656.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102]
 gi|317399802|gb|EFV80465.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102]
          Length = 105

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    ++  +D S + + D+    L++  + +   
Sbjct: 22 TLYISGDVTVKTLT--ASAFARYEQQCRLKETDSIDFSQVGKADSACVSLLLNALRRTDK 79

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 80 KPTIQNIPDSVRALAELYE 98


>gi|284799476|ref|ZP_05984072.2| conserved hypothetical protein [Neisseria subflava NJ9703]
 gi|284797962|gb|EFC53309.1| conserved hypothetical protein [Neisseria subflava NJ9703]
          Length = 105

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    ++  +D S + + D+    L++  + +   
Sbjct: 22 TLYISGDVTVKTLT--ASAFARYEQQCRLKETDSIDFSQVGKADSACVSLLLNALRRTDK 79

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 80 KPTIQNIPDSVRALAELYE 98


>gi|225077103|ref|ZP_03720302.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens
          NRL30031/H210]
 gi|224951660|gb|EEG32869.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens
          NRL30031/H210]
          Length = 105

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              +G+     ++  A        +    ++  +D S + + D+    L++  + +   
Sbjct: 22 TLYISGDVTVKTLT--ASAFARYEQQCRLKETDSIDFSQVGKADSACVSLLLNALRRTDK 79

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          K  +Q +   +  L  L  
Sbjct: 80 KPTIQNIPDSVRALAELYE 98


>gi|157373876|ref|YP_001472476.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3]
 gi|157316250|gb|ABV35348.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3]
          Length = 100

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+G+ V R +G     E+ ++  +    ++KS+Q    ++DLSA++  D+ G   ++  +
Sbjct: 6  EDGV-VCRVSGRLSQVEVVKLWSERDTLMSKSVQ----VIDLSALSYSDSAGVAFLLELL 60

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
               + +   +S+   QL  LI  
Sbjct: 61 SLAKSESRKLVLSSPSIQLLKLIGL 85


>gi|67921461|ref|ZP_00514979.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501]
 gi|67856573|gb|EAM51814.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501]
          Length = 116

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 4/103 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59
           +++ G+ VF  +G   +  +    +++   +  +   D   VD+  +  ID+ G   I+ 
Sbjct: 5   LTDIGVAVFEPSGYLTAANVDSFQEELTNFVTHNPCRDFL-VDMHQVEFIDSAGLMAIVS 63

Query: 60  --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
                ++ + K+ +  +S  +  +F L       +I   +   
Sbjct: 64  AFRLAQRLNKKLSVCCLSPSVRIIFELSQLDQALEIYEGRQAY 106


>gi|330465141|ref|YP_004402884.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032]
 gi|328808112|gb|AEB42284.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032]
          Length = 118

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 13  GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72
           G        ++ D +   ++K       + DLS ++  D+ G  + +           + 
Sbjct: 20  GELDMATAPQLQDQITDLLDK--GRSRLVFDLSEVSFCDSTGLSVFVRAKNSCDEAGGVV 77

Query: 73  GVSTHIEQLFSLISFTHRKKIKNQKP 98
            ++     +  ++  +   ++ +  P
Sbjct: 78  RLAAPQRGVLRILEVSGLVEVLHTYP 103


>gi|329911604|ref|ZP_08275574.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium
          IMCC9480]
 gi|327545838|gb|EGF30955.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 100

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +G     +++E    +  A+     SD  ++DL+ +TE D  G +L++ F +     
Sbjct: 6  ITISGELTIYQVAETRALLQRALTDHDGSDQLMLDLAGVTECDGAGVQLLLAFSQAVAAG 65

Query: 69 IKLQGVSTHIEQLFSLISF 87
               +      L  L+  
Sbjct: 66 GTDLVLCYVAPFLADLLRE 84


>gi|325002727|ref|ZP_08123839.1| anti-sigma-factor antagonist [Pseudonocardia sp. P1]
          Length = 119

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 1/82 (1%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G+     AG+        +   V   + ++       VD S +   D+ G   ++    +
Sbjct: 17 GVASVHVAGDLDYDSADALTSAVDDRL-RTADLRELRVDCSDLAYCDSYGLSSLLMVRRR 75

Query: 65 YHGKIKLQGVSTHIEQLFSLIS 86
                   +      L  L+ 
Sbjct: 76 TASAGVPMHLDNRGPGLERLLR 97


>gi|213586477|ref|ZP_03368303.1| hypothetical protein SentesTyph_36473 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 77

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%)

Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176
            +    +         G              +F+     L+RQ+Y VGV  + ++I+   
Sbjct: 5   ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64

Query: 177 VTGAVIAQQGAFQ 189
             G V+  QG   
Sbjct: 65  FIGMVLGLQGYLV 77


>gi|300789253|ref|YP_003769544.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299798767|gb|ADJ49142.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 114

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 26/97 (26%), Gaps = 2/97 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G  V    G         +   V   + K       +VDL+ +T  D+ G   ++  
Sbjct: 12  TAGGGAVVTVEGELDLATAPRLRAGVAALVLK--PGQVLVVDLAGVTFCDSSGISALIAA 69

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                      G++    +L                P
Sbjct: 70  RNVAEAAGAAVGLAAVPARLSRTFGLIGLADFFPTYP 106


>gi|119357623|ref|YP_912267.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM
          266]
 gi|119354972|gb|ABL65843.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM
          266]
          Length = 115

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          ITV    G       S +   +    + S+  D  ++DL+ +  +D+ G   ++    K 
Sbjct: 11 ITVVALQG--TLDSSSSV--QLHNYTSPSVTEDPLVIDLTNLNFLDSSGLGALVEIARKK 66

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
            K     ++   E++  +   T 
Sbjct: 67 REKGSDVKLACMNEKVRKVFEITQ 90


>gi|206578164|ref|YP_002236397.1| hypothetical protein KPK_0520 [Klebsiella pneumoniae 342]
 gi|288933381|ref|YP_003437440.1| hypothetical protein Kvar_0498 [Klebsiella variicola At-22]
 gi|290511568|ref|ZP_06550937.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55]
 gi|206567222|gb|ACI08998.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
 gi|288888110|gb|ADC56428.1| conserved hypothetical protein [Klebsiella variicola At-22]
 gi|289776561|gb|EFD84560.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55]
          Length = 96

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  + +    A        + I+DLS  T +DT G  L+++F+     
Sbjct: 13 TLALHGELDQDLLVPLWEARARATE-----GATIIDLSQTTRVDTAGLALLVHFVALIRR 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          + +   +    E L +LI  
Sbjct: 68 QGREAQLIAKSENLQTLIGL 87


>gi|302558423|ref|ZP_07310765.1| anti-sigma factor antagonist [Streptomyces griseoflavus Tu4000]
 gi|302476041|gb|EFL39134.1| anti-sigma factor antagonist [Streptomyces griseoflavus Tu4000]
          Length = 156

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/112 (9%), Positives = 30/112 (26%), Gaps = 4/112 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                  G+       E+   V  A+          +D   +   D+ G  +++      
Sbjct: 45  TLCLALVGDLDYEVGDEVLHQVRRALRAREDLRELRLDCRELVTTDSTGLSVLLQLHRDA 104

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
                  G+  H++ +  ++    R     +  +         +     G+ 
Sbjct: 105 GR----DGIGFHLDNVGPVLERLLRVTGTYEHLRPGRPDELPADPEATAGES 152


>gi|156975888|ref|YP_001446795.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116]
 gi|156527482|gb|ABU72568.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116]
          Length = 106

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + +  G      +  +       +            L  I  ID+ G  ++++ +E    
Sbjct: 14  ILKLTGALDRDSVPALWAVAQQWLPSQT---ELECSLEEIERIDSAGMVMLIHLLEHAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  Q 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103


>gi|269957911|ref|YP_003327700.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
           15894]
 gi|269306592|gb|ACZ32142.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
           15894]
          Length = 128

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                 +G   +   +E+++   M+           +D   IT +D+ G   +     + 
Sbjct: 34  RARIVLSGEIDADIGAELSE---MSAEAEATGLPVEIDAHHITFMDSSGVAFLARLATRM 90

Query: 66  HGKIKLQGVSTHIEQLFSLIS 86
             K+++      +  L  +  
Sbjct: 91  PQKVRILRAPPTVRFLLDVTR 111


>gi|254381467|ref|ZP_04996831.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1]
 gi|194340376|gb|EDX21342.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1]
          Length = 110

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G  V    G         + +         +Q  + +VDLSA+T +D+    +++   
Sbjct: 11  QTGRFVVFVTGELDINTCPRVTETTDSL---PLQGQTLLVDLSAVTFMDSAALNMLLRLR 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
            + H +     +    +Q   ++  +  + +    P  +
Sbjct: 68  HRAHAEGGTLKLCGASDQTLQVLDVSGTRSLFALSPGPA 106


>gi|295696442|ref|YP_003589680.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912]
 gi|295412044|gb|ADG06536.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912]
          Length = 116

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
            +G+ V R  G         +   V   + ++      + +LS ++ +D+ G  +++   
Sbjct: 10  RSGVVVARLRGELDHHTSDGVRAKVDALLEETGSIR-LLWNLSDLSFMDSSGLGVLLGRY 68

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
             + +  GK+   G++  + +L  L        +   +
Sbjct: 69  RRISQRGGKMACCGLTAPVRKLLELSGVLRIVPVYEDE 106


>gi|160915292|ref|ZP_02077505.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991]
 gi|158433091|gb|EDP11380.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991]
          Length = 110

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++GI  F F+G+     +S + +  +  I K  Q     +D  A++ +D+ G   ++   
Sbjct: 11 QDGILYFYFSGDLDHLHVSRMKEQCIQLIEKY-QPKQVKMDFQAVSFVDSTGIGFVLARY 69

Query: 63 EKYH---GKIKLQGVSTHIEQLFSL 84
          ++      K+ L  +S   E+LF +
Sbjct: 70 KQLSKFQAKLTLCNLSRANERLFQM 94


>gi|149191258|ref|ZP_01869514.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1]
 gi|148834928|gb|EDL51909.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1]
          Length = 110

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                 G++ +    E    +   I+         VDLS +  +D+ G   I+Y  ++ 
Sbjct: 12 TLKLELYGDFDARGSREAQPQIDDIIHNDW-HQEIEVDLSQVRFMDSSGIGAIVYLYKRL 70

Query: 66 ---HGKIKLQGVSTHIEQLFSLIS 86
               K++L+ V+    Q+  L+ 
Sbjct: 71 VERERKMRLENVTGQPLQIIQLLR 94


>gi|196232813|ref|ZP_03131663.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
 gi|196223012|gb|EDY17532.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
          Length = 116

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          S+ G+ V    G        ++   +     K  +S + ++D   +T +D+ G   ++  
Sbjct: 7  SDQGVQVLAIDGEIDLACSPDLRTLLHAYAKK--KSPALLLDFQGVTYVDSSGLATLIEY 64

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              + + GK  L  VS  +  +F L+  + 
Sbjct: 65 VRLAQPFGGKFGLAHVSERVRTIFDLVRLSE 95


>gi|317121979|ref|YP_004101982.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM
           12885]
 gi|315591959|gb|ADU51255.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM
           12885]
          Length = 117

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 4/107 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
             + R AG++     +E+    +    +    D  +V+L  +  ID+ G   ++      
Sbjct: 11  TLIARLAGDFD-EHGAEVFRHAIERAVRRRAYDHLVVNLQQVGFIDSSGLGALLGRYRRA 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
            +   ++ + G    +  +  +     R  +   +P           
Sbjct: 70  REDGARVSVVGAPPPVRAVLQMAGLPQRIPLYPDEPAALGAARGVGR 116


>gi|302560778|ref|ZP_07313120.1| translation initiation factor IF-2 [Streptomyces griseoflavus
           Tu4000]
 gi|302478396|gb|EFL41489.1| translation initiation factor IF-2 [Streptomyces griseoflavus
           Tu4000]
          Length = 229

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 31/109 (28%), Gaps = 6/109 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +    +    G         +A+ +       + +    +D+S +  +DT G E +    
Sbjct: 23  DADRALLTPRGELVRGSARALAEKLAQL---PLGTARVDLDMSGVYFMDTAGLEFLEVLR 79

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
               +    +     +    ++  L        ++   P  +    S  
Sbjct: 80  DHGRRRSMPVTATRWNGQPRRILELAGLDTGDPLRLPAPDGTASPESPA 128


>gi|290955484|ref|YP_003486666.1| anti-anti-sigma-factor [Streptomyces scabiei 87.22]
 gi|260645010|emb|CBG68096.1| putative anti-anti-sigma-factor [Streptomyces scabiei 87.22]
          Length = 127

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 5/97 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           ++ G TV    G        EI   +  A   S      ++DL  +   D  G  L+   
Sbjct: 17  TDRGRTVLELHGEIDIAAAVEIIPHLDAA--TSGPGARIVIDLRHVEFFDCSGLRLLYRA 74

Query: 62  MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
            ++     G+++L        ++  +           
Sbjct: 75  RQRVLDRDGELRLVCTHPLTLRVLKVTGLARLLPPAP 111


>gi|311900800|dbj|BAJ33208.1| putative antagonist protein [Kitasatospora setae KM-6054]
          Length = 130

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 35/104 (33%), Gaps = 2/104 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V R AG+     ++     +   +     +   +VDL+ +   D+ G  +++    
Sbjct: 28  DGTVVCRIAGDLDIESLAPARKALAEVLR--GGNRLVVVDLAQVAFCDSSGLNMLLTARA 85

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
                  +  ++     +  L+  T    + + +P         
Sbjct: 86  DALAAGAVLRLAAVSHPVERLLEITGAAAVFDVRPTVPAAIAEL 129


>gi|296132048|ref|YP_003639295.1| anti-sigma-factor antagonist [Thermincola sp. JR]
 gi|296030626|gb|ADG81394.1| anti-sigma-factor antagonist [Thermincola potens JR]
          Length = 109

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 6/87 (6%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60
                  +G+     +  I       +     +     DLS +  ID+ G   +     
Sbjct: 12 GETVQISLSGDLDISSV-NIFRRCTDDLCSD--AREIHFDLSGLEFIDSTGVGALAEMVD 68

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87
           +E    K+K   ++  I ++  +I  
Sbjct: 69 LLEGKGYKVKFTNITDDIYEILEIIGL 95


>gi|296130453|ref|YP_003637703.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
 gi|296022268|gb|ADG75504.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
          Length = 111

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + + G  V R  G       +++   V  A++        +VDL+ +  +D+ G   ++ 
Sbjct: 7  LRDPGAAVLRVTGRLTMLGAAQLRTTVDRAVD--TGHPLVVVDLAEVPFMDSSGLGALVG 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88
           +           ++   EQ+ +++  T
Sbjct: 65 GLRAARAASGDLRIAAPCEQVRTVLELT 92


>gi|257792664|ref|YP_003183270.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243]
 gi|257476561|gb|ACV56881.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243]
          Length = 101

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/94 (9%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G  V +  G+  +   +++ + +     ++   +  ++D + +  + + G  +++   +
Sbjct: 11  GGEAVLKLGGHLNTNTAADLEEALEPVFERT---NKVVLDFADLEYLSSAGLRVLVATQK 67

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           +     G +++   S  I ++F +        ++
Sbjct: 68  RVTAAEGALRIVNASDDIREVFDITGLIDVFDVE 101


>gi|71274640|ref|ZP_00650928.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Dixon]
 gi|71899648|ref|ZP_00681802.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Ann-1]
 gi|170730906|ref|YP_001776339.1| hypothetical protein Xfasm12_1820 [Xylella fastidiosa M12]
 gi|71164372|gb|EAO14086.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Dixon]
 gi|71730600|gb|EAO32677.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella
          fastidiosa Ann-1]
 gi|167965699|gb|ACA12709.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 101

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +G      +G         +  ++     +S  +    +DL+ + ++D+ G  L+  
Sbjct: 7  LHRDGNA-LVLSGPLNRDAAIRLWSEIQ---VQSKSNGVCQLDLTGVEQLDSAGVALLAE 62

Query: 61 FMEKYHGKI 69
           ME+   ++
Sbjct: 63 VMERIRVQV 71


>gi|169334415|ref|ZP_02861608.1| hypothetical protein ANASTE_00815 [Anaerofustis stercorihominis
          DSM 17244]
 gi|169259132|gb|EDS73098.1| hypothetical protein ANASTE_00815 [Anaerofustis stercorihominis
          DSM 17244]
          Length = 114

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
                +  G+       ++ +++  A+ K  +  + I DLS +T +D+ G  L M   +
Sbjct: 9  GNTLTIKIKGDLDDHVTLDLRENIDYALCKK-EIKNLIFDLSELTFMDSAGIGLFMGRYK 67

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
          K   +    G+ T  +Q+  ++  +
Sbjct: 68 KISAQNGKCGLVTKDKQIIKILRMS 92


>gi|304396329|ref|ZP_07378210.1| anti-sigma-factor antagonist [Pantoea sp. aB]
 gi|304355838|gb|EFM20204.1| anti-sigma-factor antagonist [Pantoea sp. aB]
          Length = 101

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E   +     G      +  +       I          +D++ +  +D+ G  L+++  
Sbjct: 8  EREASTLLLKGELDRDTLMSLWQQRETLIKDVD-----TIDVAGLERVDSSGLALLVHLR 62

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
          E    +      +   ++L SLI+ 
Sbjct: 63 EIARAQGITPCFTGISDKLRSLITL 87


>gi|52841081|ref|YP_094880.1| hypothetical protein lpg0845 [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|54296866|ref|YP_123235.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris]
 gi|52628192|gb|AAU26933.1| hypothetical protein lpg0845 [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|53750651|emb|CAH12058.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris]
          Length = 93

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70
                +  + D +  A+ +  +     +DLS +T  D+ G  LI+      ++ +    
Sbjct: 11 ELTFKSVVSVRDKLYKALMEDTRGR-FCLDLSEVTHCDSAGLALIIEARKLCKQNNKVFD 69

Query: 71 LQGVSTHIEQLFSLI 85
          + G+S   + L    
Sbjct: 70 VIGISPETQSLAEFC 84


>gi|229592480|ref|YP_002874599.1| hypothetical protein PFLU5094 [Pseudomonas fluorescens SBW25]
 gi|229364346|emb|CAY52106.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 95

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +        G      ++E+A  +   +++   +    +DLS +TE+D  G +L+     
Sbjct: 9  DDTAHVGIDGELTIYTVAELAGAL---LSQMGAAPRLELDLSQVTEMDGAGLQLLAVIQR 65

Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87
          +         V+ H   +   +  
Sbjct: 66 EAGIAGTALSVTGHSHAVMQALQL 89


>gi|222100025|ref|YP_002534593.1| Putative anti-sigma factor antagonist [Thermotoga neapolitana DSM
           4359]
 gi|221572415|gb|ACM23227.1| Putative anti-sigma factor antagonist [Thermotoga neapolitana DSM
           4359]
          Length = 116

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +    + +  G   +   SE+ + +   ++ + +    ++DLS+++ +D+ G   ++  +
Sbjct: 17  QEDKIIVKVHGEIDAYNSSELKEQLRNLVSSTDK-KKIVLDLSSVSYMDSAGLGTLVVIL 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +      K   +S+  E +  +   TH
Sbjct: 76  KDAKINGKEFILSSLKESILRIFKLTH 102


>gi|318058333|ref|ZP_07977056.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actG]
 gi|318078578|ref|ZP_07985910.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actF]
          Length = 119

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +     V    G        ++ D +     +        +DL+ +T  D+ G  +++  
Sbjct: 11  ATTAGVVMELTGELDHHTAPDVRDALT--GVRLAPGRQLTLDLAGVTFCDSSGLTVLIAS 68

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
                       ++   E++  +I     + +    P      +S++
Sbjct: 69  RNHALTAGATLALAAVPERVSRIIRVVGLEPVFPTHPSARAAEDSWR 115


>gi|261253023|ref|ZP_05945596.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891]
 gi|260936414|gb|EEX92403.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891]
          Length = 106

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + + IT     GN  +   S  A   +  I          +D S +  +D+ G   I+Y 
Sbjct: 8   ANDTITTLIINGNLDADG-SRFAQPHIDEIIADNTQRDIEIDFSQVQFLDSSGVGAIVYL 66

Query: 62  MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
            ++       ++++ VS    ++ +L+       + + 
Sbjct: 67  YKRLVERQRNMRIENVSGQPLEIINLLRIDQAIPVNSH 104


>gi|240079834|ref|ZP_04724377.1| hypothetical protein NgonF_00756 [Neisseria gonorrhoeae FA19]
 gi|268595979|ref|ZP_06130146.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268549767|gb|EEZ44786.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
          Length = 92

 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+     ++   D       +    ++  VD   +   D+    L++  +    G
Sbjct: 9  TLHIGGDITVKTLTG--DAFGRFRQQCCLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|3287905|sp|O32720|SP2AA_PAEPO RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage
          II sporulation protein AA
 gi|2529265|gb|AAB81184.1| spoIIAA gene product [Paenibacillus polymyxa]
          Length = 117

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
          G+ + R +G         +   +  AI +  Q +  ++ L  +  +D+ G  +I+     
Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          + +  G++ +  V+  + +L  +
Sbjct: 71 INQKGGEMAVCDVNPPVHRLLDM 93


>gi|153871244|ref|ZP_02000467.1| anti-sigma-factor antagonist [Beggiatoa sp. PS]
 gi|152072289|gb|EDN69532.1| anti-sigma-factor antagonist [Beggiatoa sp. PS]
          Length = 111

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 7/66 (10%)

Query: 10 RFAGNWKSPEISEIADDVVMAI-------NKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          R +G      + E+  +    +        K IQ    ++DLS +T  D+ G   ++   
Sbjct: 15 RLSGELTFTTVGELLSEFTEKMSLLDNGGAKKIQPAPQVMDLSDVTRTDSAGLAFLIELQ 74

Query: 63 EKYHGK 68
          ++    
Sbjct: 75 KQTKDA 80


>gi|291438981|ref|ZP_06578371.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672]
 gi|291341876|gb|EFE68832.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672]
          Length = 124

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          + G  V R +G       S +   V  A+       S ++DLS +   D+ G  +++   
Sbjct: 10 QGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAAR 67

Query: 60 YFMEKYHGKIKLQ 72
            +    G ++L 
Sbjct: 68 RLLRSCQGTLRLI 80


>gi|229846115|ref|ZP_04466227.1| anti-sigma factor B antagonist [Haemophilus influenzae 7P49H1]
 gi|229811119|gb|EEP46836.1| anti-sigma factor B antagonist [Haemophilus influenzae 7P49H1]
          Length = 105

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62
          N        G      +  +     + ++ S    + +  +LS +  ID+ G   +  F+
Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSASTLDKTIVEWNLSDLQHIDSAGFAALCDFL 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
           +     K   +    +QL +L   
Sbjct: 70 RECQKLNKTVRLVYPPKQLLTLADL 94


>gi|282860687|ref|ZP_06269753.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|282564423|gb|EFB69959.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
          Length = 124

 Score = 41.1 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          +   TV R  G         +   V  A+ +       ++DLS +   D+ G  +++   
Sbjct: 10 QGAWTVLRIRGELDLASAPAVRQSVHGAVAE--GRHDVVLDLSGVFFCDSSGVNVLIATR 67

Query: 60 YFMEKYHGKIKLQ 72
            M+   G+++L 
Sbjct: 68 RLMKSCGGRLRLI 80


>gi|239926725|ref|ZP_04683678.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291435042|ref|ZP_06574432.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291337937|gb|EFE64893.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 139

 Score = 41.1 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 33/105 (31%), Gaps = 2/105 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
              +             ++AD +   +       S ++DLS +T +D+ G   ++     
Sbjct: 37  DRHLVTVRDALDLHTAHQLADALQPLLL--TDGHSVLLDLSGVTFLDSTGLTCLIAAYRT 94

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
                    +    E++  +++ T   ++    P      +    
Sbjct: 95  ARTNGARLVLIAPSERVRHMLALTGVDQVLRSYPTPDSVPDWSAR 139


>gi|315646366|ref|ZP_07899484.1| anti-sigma-factor antagonist [Paenibacillus vortex V453]
 gi|315278009|gb|EFU41329.1| anti-sigma-factor antagonist [Paenibacillus vortex V453]
          Length = 117

 Score = 41.1 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          I + R +G         +   +  AI +  Q++  ++ L  +  +D+ G  +I+    F+
Sbjct: 13 ILIVRLSGELDHHTADHVRMQLEEAIQRR-QTEHLVLSLKELDFMDSSGLGVILGRYKFI 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++  GK+ +  V   + +L  +
Sbjct: 72 KQKGGKMAVCDVKPQVYRLLEM 93


>gi|262393186|ref|YP_003285040.1| putative anti-sigma B factor antagonist [Vibrio sp. Ex25]
 gi|262336780|gb|ACY50575.1| putative anti-sigma B factor antagonist [Vibrio sp. Ex25]
          Length = 106

 Score = 41.1 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + +  G      +  +                    L  I  +D+ G  ++++ +E    
Sbjct: 14  ILKLTGALDRDTVPSLWAYAQQW---QPAQAELECSLKEIERVDSAGMVMLIHLLENAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  Q 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103


>gi|145632447|ref|ZP_01788182.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 3655]
 gi|145634241|ref|ZP_01789952.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittAA]
 gi|229843878|ref|ZP_04464019.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 6P18H1]
 gi|144987354|gb|EDJ93884.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 3655]
 gi|145268685|gb|EDK08678.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae PittAA]
 gi|229812872|gb|EEP48560.1| predicted NTP binding protein, contains STAS domain [Haemophilus
          influenzae 6P18H1]
          Length = 105

 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 1/86 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62
          N        G      +  +     + +++S    + +  +LS +  ID+ G   +  F 
Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTALCDFF 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
           +     K   +    +QL +L    
Sbjct: 70 RECQKINKTVRLVYPPKQLLTLADLV 95


>gi|54310332|ref|YP_131352.1| anti-sigma B factor antagonist [Photobacterium profundum SS9]
 gi|46914773|emb|CAG21550.1| hypothetical anti-sigma B factor antagonist [Photobacterium
          profundum SS9]
          Length = 103

 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
            +G  +   +               Q     +DLS ++ +D+ G  ++++  ++     
Sbjct: 17 CLSGVLERDTVPAFWRQ---RCEWMPQGSKVTLDLSGLSRVDSAGMVMLLHLSQQLINAG 73

Query: 70 KLQGVSTHIEQLFSLISFTHRKKI 93
              +    EQL +L+  +H + +
Sbjct: 74 CDFTLLNVPEQLKTLLRLSHVESM 97


>gi|288920523|ref|ZP_06414830.1| anti-sigma-factor antagonist [Frankia sp. EUN1f]
 gi|288348094|gb|EFC82364.1| anti-sigma-factor antagonist [Frankia sp. EUN1f]
          Length = 143

 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 44/121 (36%), Gaps = 7/121 (5%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
              V    G      +  +   ++ A  +       +VDL  +T +D+ G  +I+Y  ++
Sbjct: 13  DAVVVHPEGEIDYSSLEPLRQALLDA--RIAGVREIVVDLREVTFLDSQGLAVILYAHQR 70

Query: 65  ---YHGKIKLQGVSTHIEQLFSL--ISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119
                G++ L+ ++ +  +L S+  ++        +Q           +      G+  +
Sbjct: 71  QRSAGGRLILRNLNENAYRLLSVTNLTTVIDVDHGSQVASAHSPVAPAQGQPARTGQPTL 130

Query: 120 K 120
            
Sbjct: 131 A 131


>gi|194100079|ref|YP_002003219.1| hypothetical protein NGK_2594 [Neisseria gonorrhoeae NCCP11945]
 gi|239998071|ref|ZP_04717995.1| hypothetical protein Ngon3_01103 [Neisseria gonorrhoeae 35/02]
 gi|240116990|ref|ZP_04731052.1| hypothetical protein NgonPID_00768 [Neisseria gonorrhoeae PID1]
 gi|240122628|ref|ZP_04735584.1| hypothetical protein NgonP_01551 [Neisseria gonorrhoeae PID332]
 gi|268593923|ref|ZP_06128090.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268602674|ref|ZP_06136841.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268681224|ref|ZP_06148086.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|193935369|gb|ACF31193.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|268547312|gb|EEZ42730.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268586805|gb|EEZ51481.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268621508|gb|EEZ53908.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
          Length = 92

 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+     ++   D       +    ++  VD   +   D+    L++  +    G
Sbjct: 9  TLHIGGDITVKTLTG--DAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|303248528|ref|ZP_07334785.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
 gi|302490058|gb|EFL49979.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
          Length = 107

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          +   V R +G       + +  ++ + I+ + Q    + ++  +  +D+ G  L++    
Sbjct: 10 DQALVIRLSGEIVMDLAANLKAELTLLIDAT-QKPEVVCNMRRVDFMDSSGVGLLIGIRR 68

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
            +       +   S  I +L S++  T 
Sbjct: 69 LCQDKGKAFSVADPSPAIRKLISVLRLTE 97


>gi|291435469|ref|ZP_06574859.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291338364|gb|EFE65320.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
          Length = 181

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 3/105 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G TV  F G        EI   +  A          ++DL+ +   D  G  L+    
Sbjct: 72  DRGHTVLEFRGEIDIAAAEEIVPHLDAATAA--PDARIVIDLTRVEFFDCSGLRLLFRAR 129

Query: 63  EK-YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
            +   G  +L  V  H   L  L      + +       +     
Sbjct: 130 HRVLAGHGRLHLVCAHPLTLRMLRITDLARLLPPYPTLDAALAQP 174


>gi|302544545|ref|ZP_07296887.1| putative anti anti-sigma factor [Streptomyces hygroscopicus ATCC
          53653]
 gi|302462163|gb|EFL25256.1| putative anti anti-sigma factor [Streptomyces himastatinicus ATCC
          53653]
          Length = 130

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 9/95 (9%)

Query: 3  ENGI---TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          E+G     V + +G         +   V  A+ +     S ++DLS +   D+ G  +++
Sbjct: 7  EDGRGEWVVLQVSGEMDLVTSPAVRQHVHDAVAE--GRHSLVLDLSEVRFCDSSGVGVLI 64

Query: 60 ---YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91
               M    GK++L  +        S +      
Sbjct: 65 AARRLMRSCSGKLRLI-LPPQDAAHGSHVHRVLAA 98


>gi|157363209|ref|YP_001469976.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO]
 gi|157313813|gb|ABV32912.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO]
          Length = 121

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + + R  G       +E+ + +        + D  I+DLS +  +D+    +++   + 
Sbjct: 14 DVWIIRPNGELDMSNSAELKEQIKREFIHQGKVD-LIIDLSHVDYMDSSALGVLIGLQKS 72

Query: 65 YH---GKIKLQGVSTHIEQLFSLISF 87
               G + L G+  +++++F + S 
Sbjct: 73 CRLNGGALILCGLEENLKRIFKMTSL 98


>gi|46202000|ref|ZP_00053976.2| COG1366: Anti-anti-sigma regulatory factor (antagonist of
          anti-sigma factor) [Magnetospirillum magnetotacticum
          MS-1]
          Length = 100

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 5/90 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI--GAELIM 59
          S +G       G     +     D +        ++   + +LS +  +D+   G  LI+
Sbjct: 7  SGDGGLTVTLGGRMTHKDHKAFRDILSKI--NEARTPKVVFNLSRVEFMDSSALGMLLIV 64

Query: 60 Y-FMEKYHGKIKLQGVSTHIEQLFSLISFT 88
               +    + L+G +  +E L  +    
Sbjct: 65 RDAAVQQRRAVVLRGATGQVENLIKVAKLH 94


>gi|153834585|ref|ZP_01987252.1| YrbB protein [Vibrio harveyi HY01]
 gi|148869028|gb|EDL68073.1| YrbB protein [Vibrio harveyi HY01]
          Length = 106

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + +  G      +  +                    L  I  ID+ G  ++++ +E    
Sbjct: 14  ILKLTGALDRDSVPALWAVAQQW---QPSQTELECSLEEIERIDSAGMVMLIHLLEHAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  Q 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103


>gi|83309432|ref|YP_419696.1| anti-anti-sigma regulatory factor [Magnetospirillum magneticum
          AMB-1]
 gi|82944273|dbj|BAE49137.1| Anti-anti-sigma regulatory factor [Magnetospirillum magneticum
          AMB-1]
          Length = 108

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +    TV   +G         +   ++  +   ++     VDLS +  ID+ G   ++  
Sbjct: 7  AAENATVISLSGEVDLRHSPNLRKTLMELM---LEKRPVAVDLSRVEYIDSSGIAGLVEA 63

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
               K      L  +S  + ++  L     
Sbjct: 64 YQMARKNGTLFVLVAISDPVRRVLQLARLDR 94


>gi|240127332|ref|ZP_04739993.1| hypothetical protein NgonS_01550 [Neisseria gonorrhoeae
          SK-93-1035]
 gi|268685701|ref|ZP_06152563.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268625985|gb|EEZ58385.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 92

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+     ++   D       +    ++  VD   +   D+    L++  +    G
Sbjct: 9  TLHIGGDITVKTLT--GDAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|323491741|ref|ZP_08096918.1| putative anti-sigma B factor antagonist [Vibrio brasiliensis LMG
          20546]
 gi|323313997|gb|EGA67084.1| putative anti-sigma B factor antagonist [Vibrio brasiliensis LMG
          20546]
          Length = 80

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
               +G      +  +  ++          +   + L A+  ID+ G  ++++ +E   
Sbjct: 12 HQCALSGPLDRDTVPALWTELQAF---KPTQNEMELSLKAVERIDSAGMVMLIHLLENAK 68

Query: 67 GKIK 70
           K+ 
Sbjct: 69 NKLS 72


>gi|239945839|ref|ZP_04697776.1| putative anti-sigma factor antagonist [Streptomyces roseosporus
           NRRL 15998]
 gi|239992308|ref|ZP_04712972.1| putative anti-sigma factor antagonist [Streptomyces roseosporus
           NRRL 11379]
          Length = 120

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V   +G+     ++ +   +  A +    S   +VDLS +   D+    +++   
Sbjct: 18  EREALVLSVSGDLDIDSVTPLGLALSSAADD--GSGPVVVDLSGVGFADSTTVNVLLQGH 75

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                +++L   S  +++L  +I       +
Sbjct: 76  TALGDRLRLAAPSPFMQRLIGMIGLDSALPV 106


>gi|289642188|ref|ZP_06474339.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca
           glomerata]
 gi|289508034|gb|EFD28982.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca
           glomerata]
          Length = 128

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 45/107 (42%), Gaps = 5/107 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R  G+     +  + + ++ A  +       +VDL+ ++ +D+ G  +I++  ++ 
Sbjct: 14  AVVVRPIGDVDYSSLEPLREALLDA--RIAGVRDIVVDLAEVSFMDSQGLAVILFAHQRQ 71

Query: 66  H---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
               G++ L+  S  I +L  + +  H   +++   QR         
Sbjct: 72  RSVGGRLILRSPSEEIARLLCVTNVAHVIDVESGNSQRDPAAPRAGG 118


>gi|297204186|ref|ZP_06921583.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197714124|gb|EDY58158.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 147

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ V    G     ++  +  + +++ + ++     + DLS +T +D+ G  + +   +
Sbjct: 46  DGVRVVTVRGEID-HDVKGVLTEALLSEDGAVPPPRIVADLSGVTFMDSSGINVFVAAYQ 104

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFT 88
           +  G      ++   + +  ++   
Sbjct: 105 QVSGAQGWLRIAGAQDSVLRVLQMV 129


>gi|71906372|ref|YP_283959.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
 gi|71845993|gb|AAZ45489.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Dechloromonas aromatica RCB]
          Length = 101

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++E G  V +  G +               +       S +VD S +  +D+    +++ 
Sbjct: 6  LNEAGKAVIKLVGRFDFNT-HREFRGSYEPLVSDTSVRSVVVDFSGVDYLDSSALGMLLM 64

Query: 61 FMEKYHG---KIKLQGVSTHIEQLFSLISF 87
            +K  G   ++ L GV  +++Q+  + +F
Sbjct: 65 LRDKLGGANKEVALTGVRGNVKQVLDIANF 94


>gi|328471429|gb|EGF42324.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus
           10329]
          Length = 106

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G      +  +    V A             L  I  +D+ G  ++++ +E    
Sbjct: 14  TLTLTGALDRDSVPSLW---VFAQQWKPSQKELECSLEEIERVDSAGMVMLIHLLEHAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  + 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIKN 103


>gi|16273011|ref|NP_439240.1| putative NTP binding protein, contains STAS domain [Haemophilus
          influenzae Rd KW20]
 gi|260580168|ref|ZP_05847998.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|2495688|sp|Q57407|Y1083_HAEIN RecName: Full=Uncharacterized protein HI_1083
 gi|1574637|gb|AAC22739.1| anti-sigma factor B antagonist, putative [Haemophilus influenzae
          Rd KW20]
 gi|260093452|gb|EEW77385.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 105

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62
          N        G      +  +     + ++ S    + +  +LS +  ID+ G   +  F+
Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSASTLDKTIVEWNLSDLQHIDSAGFAALCDFL 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
           +     K   +    +QL +L   
Sbjct: 70 RECQKLNKTVRLVYPPKQLLTLADL 94


>gi|114564527|ref|YP_752041.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400]
 gi|114335820|gb|ABI73202.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400]
          Length = 107

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +G     E+ ++          S Q    +VDLSA+  +D+ G  L++ F++ +   
Sbjct: 11 CIVSGRLTQDEVKQLWPKRHELFTASTQ----VVDLSALEYVDSAGVALLLAFIKLHASS 66

Query: 69 IKLQGVSTH 77
           +   VS  
Sbjct: 67 SQETSVSRQ 75


>gi|258652299|ref|YP_003201455.1| PAS/PAC sensor protein [Nakamurella multipartita DSM 44233]
 gi|258555524|gb|ACV78466.1| putative PAS/PAC sensor protein [Nakamurella multipartita DSM
           44233]
          Length = 340

 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 29/66 (43%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GI V   AG+       +    +   + ++ +    +VDL+ +  + ++G  ++  F  
Sbjct: 238 DGIPVLHVAGDVDLSTGPQFTALLATLVGQAERPTPVVVDLTDLGHLGSVGLAVLTQFHR 297

Query: 64  KYHGKI 69
           +  GK 
Sbjct: 298 RCQGKG 303


>gi|329938574|ref|ZP_08287999.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045]
 gi|329302547|gb|EGG46438.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045]
          Length = 114

 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 33/103 (32%), Gaps = 2/103 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ V    G        +      +     ++    +VDLS ++ +D+ G  + +   +
Sbjct: 14  DGVRVVSVRGE--IDNDGKDVLRQALLPADGMEPARLVVDLSGVSFMDSSGINVFVAAHQ 71

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
              G      ++   E +  ++       I    P      + 
Sbjct: 72  AVTGTEGWVRIAAAQESVLRVLRLVGVDAIITCHPTLEEALHP 114


>gi|323492705|ref|ZP_08097849.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG
           20546]
 gi|323313080|gb|EGA66200.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG
           20546]
          Length = 106

 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 4/92 (4%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65
                GN  +         +   I +        +D S +  +D+ G   I+Y  ++   
Sbjct: 14  TLIINGNLDADGSRSAQPHIDQIIAED-SGRDVEIDFSQVQFLDSSGVGAIVYLYKRLIE 72

Query: 66  -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
               ++++ VS    ++ +L+  +    + + 
Sbjct: 73  RQRSMRIENVSGQPLEIINLLRISQAIPVNSH 104


>gi|163803757|ref|ZP_02197614.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4]
 gi|159172441|gb|EDP57310.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4]
          Length = 107

 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 3/86 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          + +  G      +  +                    L  I  ID+ G  ++++ +E    
Sbjct: 14 ILKLTGALDRDSVPTLWAVAQQW---QPAQTELECSLEEIERIDSAGMVMLIHLLEHAKK 70

Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKI 93
          +     +S    QL +L   ++ + +
Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESL 96


>gi|27365950|ref|NP_761478.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6]
 gi|37679817|ref|NP_934426.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016]
 gi|320156463|ref|YP_004188842.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O]
 gi|27362099|gb|AAO11005.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6]
 gi|37198562|dbj|BAC94397.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016]
 gi|319931775|gb|ADV86639.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O]
          Length = 106

 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                  GN+ +    +    +   IN   +     VD+S +  +D+ G   I+Y  ++ 
Sbjct: 12  TLTLSIVGNFDAHGSRQAQIHIDELINND-RHTDIEVDMSGVEFLDSSGIGAIVYLYKRL 70

Query: 66  ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
                 ++++ V     ++ SL+   H   + +++
Sbjct: 71  VERERTMRIENVRGQPLEIISLLRIDHAIPVNSKQ 105


>gi|220931544|ref|YP_002508452.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H
          168]
 gi|219992854|gb|ACL69457.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H
          168]
          Length = 120

 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
           + R +G      + E  D  +  +  +      I++L  +  ID+ G   I+     ++
Sbjct: 12 LIVRLSGELDMHSVPEFKDKTIKLMENN-NLKHLILNLKGVKFIDSSGVGAILGRYRDLK 70

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
             GK+ L  +   +E++F L
Sbjct: 71 DKGGKVMLVSLKPQVEKIFEL 91


>gi|296130596|ref|YP_003637846.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
 gi|296022411|gb|ADG75647.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
          Length = 111

 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G         + + V   +         +VDL+ +T +D+ G  L++  ++
Sbjct: 11 GARTVVHVGGEIDVASADRLRERVAHLLAAGRTD--LLVDLTGVTFMDSTGLGLLVGTLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +    E+L  +  
Sbjct: 69 RVRLAGGRLDLVVDSERLLKVFR 91


>gi|83590341|ref|YP_430350.1| anti-sigma-factor antagonist domain-containing protein [Moorella
          thermoacetica ATCC 39073]
 gi|83573255|gb|ABC19807.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella
          thermoacetica ATCC 39073]
          Length = 113

 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          E      R  G        ++  ++  +++   + +  ++DL+ +T +D+ G  +I+   
Sbjct: 8  EGKELQARIKGEVDLETADQLRQELEASLD-HARPEVLLLDLAGVTFMDSSGLGVILGRY 66

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            ++K  G+I L      + +L  L
Sbjct: 67 RRLQKKGGRIILYRPQPQVRRLLEL 91


>gi|85713025|ref|ZP_01044062.1| STAS domain protein [Idiomarina baltica OS145]
 gi|85693128|gb|EAQ31089.1| STAS domain protein [Idiomarina baltica OS145]
          Length = 100

 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++ +G      AG+     I    + +   +N+        VD++ +T IDT G  +++ 
Sbjct: 10 LANDG--TLSLAGSLTRSAIPAQWNALSQLLNEKTVKQ---VDVAEVTLIDTAGVAILLE 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85
           ++     + LQ      EQL  ++
Sbjct: 65 VIKHNRDAVPLQ-CKGSSEQLRQIV 88


>gi|323498700|ref|ZP_08103690.1| putative anti-sigma B factor antagonist [Vibrio sinaloensis DSM
          21326]
 gi|323316256|gb|EGA69277.1| putative anti-sigma B factor antagonist [Vibrio sinaloensis DSM
          21326]
          Length = 102

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++E+G   +  +G      +  +  ++       ++   A V L  +  ID+ G  ++++
Sbjct: 8  VNESG--QYAISGVLDRDSVPALWSELKQM---QMKQHDAEVSLQQLNRIDSAGMVMLIH 62

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +E    +     +S   +QL +L   ++ ++ 
Sbjct: 63 LIEHAKKQNCHIMLSFVPKQLRTLFQLSNVEQH 95


>gi|302522746|ref|ZP_07275088.1| anti-sigma factor [Streptomyces sp. SPB78]
 gi|302431641|gb|EFL03457.1| anti-sigma factor [Streptomyces sp. SPB78]
          Length = 115

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +     V    G        ++ D +     +        +DL+ +T  D+ G  +++  
Sbjct: 7   ATTAGVVMELTGELDHHTAPDVRDALT--GVRLAPGRQLTLDLAGVTFCDSSGLTVLIAS 64

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
                       ++   E++  +I     + +    P      +S++
Sbjct: 65  RNHALTAGATLVLAAVPERVSRIIRVVGLEPVFPTHPTAGAAEDSWR 111


>gi|329934251|ref|ZP_08284330.1| putative anti-sigma factor antagonist [Streptomyces
          griseoaurantiacus M045]
 gi|329305847|gb|EGG49702.1| putative anti-sigma factor antagonist [Streptomyces
          griseoaurantiacus M045]
          Length = 103

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G      +G        ++A+ +         S   +VDL+ +  +D+ G  ++    E
Sbjct: 14 DGTGRLAVSGEIDMSNAGDLAEALDS------GSGPLVVDLTGVEYLDSAGLSVLFAHAE 67

Query: 64 KYH 66
          +  
Sbjct: 68 RLE 70


>gi|290476803|ref|YP_003469714.1| hypothetical protein XBJ1_3834 [Xenorhabdus bovienii SS-2004]
 gi|289176147|emb|CBJ82952.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
          Length = 111

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 12/93 (12%)

Query: 2  SENG-------ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54
          S++G        +     G      +  +          S+ ++   +D+S +  +D+ G
Sbjct: 10 SDDGKISWEQTGSTLFLHGTLDRDSLLPLWQQ-----KGSVMAEIENIDVSRLEHVDSTG 64

Query: 55 AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF 87
            L ++       + K    S   E+L +LI+ 
Sbjct: 65 LALFVHLKGDMQQRGKRLTFSGISERLETLIAL 97


>gi|239930616|ref|ZP_04687569.1| anti anti sigma factor [Streptomyces ghanaensis ATCC 14672]
          Length = 126

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          + G  V R +G       S +   V  A+       S ++DLS +   D+ G  +++   
Sbjct: 12 QGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAAR 69

Query: 60 YFMEKYHGKIKLQ 72
            +    G ++L 
Sbjct: 70 RLLRSCQGTLRLI 82


>gi|170717847|ref|YP_001784906.1| hypothetical protein HSM_1586 [Haemophilus somnus 2336]
 gi|168825976|gb|ACA31347.1| conserved hypothetical protein [Haemophilus somnus 2336]
          Length = 94

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 8  VFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            R  G      +   +     +  +  +     + +LS +  ID+ G  L+  F+ +  
Sbjct: 2  TLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFINELE 61

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
           ++  Q +     QL  L   
Sbjct: 62 KQVSSQKIHNAPIQLEILADL 82


>gi|167770369|ref|ZP_02442422.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM
           17241]
 gi|167667691|gb|EDS11821.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM
           17241]
          Length = 130

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           + +      G+       E+ + +  A+ K+ Q+ +  +D   +T +D+ G  L+M    
Sbjct: 16  DELVTAHIIGDIDHHNAREMRETIDDAVLKA-QARALELDFRDVTFMDSSGIGLVMGRYK 74

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
            M++  G +++  ++ H++++  L        +   + +
Sbjct: 75  LMQEVGGSLRVVNIAGHLKKVMMLAGLDRLAVMDKPERR 113


>gi|162450573|ref|YP_001612940.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56']
 gi|161161155|emb|CAN92460.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56']
          Length = 298

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G+ V    G   +    ++ ++++  + +  Q+  AI+D++ + +IDT  A  ++     
Sbjct: 183 GVLVLPLVGALDAARAQQMMENLLGKVVER-QARVAIIDVTGVPDIDTASASALLQVARA 241

Query: 65  ---YHGKIKLQGVSTHIEQLFSLIS 86
                 ++ L G+   + Q    + 
Sbjct: 242 VRLLGAQVVLTGIRPEVSQAIVRLD 266


>gi|91225576|ref|ZP_01260650.1| putative anti-sigma B factor antagonist [Vibrio alginolyticus
           12G01]
 gi|91189696|gb|EAS75970.1| putative anti-sigma B factor antagonist [Vibrio alginolyticus
           12G01]
          Length = 106

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + +  G      +  +                    L  I  +D+ G  ++++ +E    
Sbjct: 14  ILKLTGALDRDTVPSLWAYAQQW---QPAQSELECSLKEIERVDSAGMVMLIHLLEHAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  Q 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103


>gi|302392457|ref|YP_003828277.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501]
 gi|302204534|gb|ADL13212.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501]
          Length = 112

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
           + R  G+     +  +   +   +   +   + I++L  +  ID+ G   I+     + 
Sbjct: 12 LIVRIDGSLDLHTVDTLRKRIDEKLTGEVGIQNMILNLKNVDFIDSSGLGFIIGRYKQIN 71

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
           + GK+K+  V+  I+Q+F L
Sbjct: 72 NHGGKLKIINVNNSIKQVFEL 92


>gi|317046707|ref|YP_004114355.1| anti-sigma B factor antagonist [Pantoea sp. At-9b]
 gi|316948324|gb|ADU67799.1| anti-sigma B factor antagonist [Pantoea sp. At-9b]
          Length = 101

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 5/82 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           +    +G      +  +          +       +D++A+  +D+ G  L+++  E  
Sbjct: 11 ASTLALSGKLDRETLLALWRQ-----RDTAMVGIDTIDVAALDRVDSAGLALLVHLREIV 65

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
            +      S   ++L SLI+ 
Sbjct: 66 RAQGSTPCFSGITDKLQSLITL 87


>gi|242277488|ref|YP_002989617.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638]
 gi|242120382|gb|ACS78078.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638]
          Length = 102

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63
           + + +G        ++ + +   + +   S    VDLS +  +D+ G   ++       
Sbjct: 14 VLIKISGEVDFTGTPDLREKMHAFVKQ--TSGEVRVDLSELEYLDSSGLASLIELRRILN 71

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          K    +K+  V+  +++L +L  
Sbjct: 72 KDSRSVKIIAVTDQVDRLLNLTQ 94


>gi|289773548|ref|ZP_06532926.1| anti sigma factor antagonist [Streptomyces lividans TK24]
 gi|3293548|gb|AAC25772.1| unknown [Streptomyces lividans]
 gi|289703747|gb|EFD71176.1| anti sigma factor antagonist [Streptomyces lividans TK24]
          Length = 128

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 2/112 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G TV  F G       +EIA  +     +       ++DL  I   D  G  L+     +
Sbjct: 19  GHTVLEFRGEIDIASAAEIAPYLDRETGR--PGARVVLDLDGIEFFDCSGLRLLYRARSQ 76

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
                    +         ++  T   ++    P         +      G+
Sbjct: 77  VLDGGGQVRLVCTHAMTLRMLRITGLARLLPPWPTLDEALGVSRPAGRRTGR 128


>gi|296534459|ref|ZP_06896891.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296265215|gb|EFH11408.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 58

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55
          V R  G + +  +  +   ++ A        +  +DLS +T +DT GA
Sbjct: 16 VLRLRGAYTTQSVGPVWQGLLRAAR-----GATRLDLSGVTALDTTGA 58


>gi|170783010|ref|YP_001711344.1| putative anti-sigma factor antagonist [Clavibacter michiganensis
          subsp. sepedonicus]
 gi|169157580|emb|CAQ02777.1| putative anti-sigma factor antagonist [Clavibacter michiganensis
          subsp. sepedonicus]
          Length = 122

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+ +TV   AG        E+   +  A++ +      +VDL+ +  ID+ G   ++  +
Sbjct: 11 EDDVTVVTAAGMLNMAAAPELRQAIHDALDPAPA--RIVVDLAGVDFIDSSGLGALIAGL 68

Query: 63 EKYHGKI 69
                 
Sbjct: 69 RAARDAG 75


>gi|269967995|ref|ZP_06182033.1| hypothetical protein VMC_34630 [Vibrio alginolyticus 40B]
 gi|269827352|gb|EEZ81648.1| hypothetical protein VMC_34630 [Vibrio alginolyticus 40B]
          Length = 106

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + +  G      +  +                    L  I  +D+ G  ++++ +E    
Sbjct: 14  ILKLTGALDRDTVPSLWAYAQQW---QPAQSELECSLKEIERVDSAGMVMLIHLLEHAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  Q 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103


>gi|297196941|ref|ZP_06914338.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197715920|gb|EDY59954.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 172

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 3/105 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+ V   AG             +            A+VD   +  +D+ G  +++  
Sbjct: 67  TADGVHVLALAGEIDHTTADTFRQALTA---DDKFPRHAVVDFRDVIFMDSSGINVLVAA 123

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
               H K     ++    ++  L+       I    P  +    +
Sbjct: 124 NNAAHAKGGSLRLAHTPARVLDLLHVVGLADIIPLYPTLNDALAA 168


>gi|269960376|ref|ZP_06174750.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834987|gb|EEZ89072.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 106

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + +  G      +  +                    L  I  ID+ G  ++++ +E    
Sbjct: 14  ILKLTGALDRDTVPALWAVAQQW---QPSQTELECSLQEIERIDSAGMVMLIHLLEHAKK 70

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     +S    QL +L   ++ + +  +  Q 
Sbjct: 71  QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103


>gi|238918534|ref|YP_002932048.1| hypothetical protein NT01EI_0584 [Edwardsiella ictaluri 93-146]
 gi|238868102|gb|ACR67813.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 104

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 6/93 (6%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
             +    G  +   + EI       +     +  A +D+S ++ +D+ G  L+++    
Sbjct: 12 DGAILYLQGVLECDSLGEIWQQRQALL-----TGIACLDISELSRVDSAGLALLLHVQNL 66

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
          +    I L+G+S  +  L +L +          
Sbjct: 67 RPEMPIPLRGISDRLRTLITLYNLQEIVPCAAP 99


>gi|269129013|ref|YP_003302383.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268313971|gb|ACZ00346.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 117

 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +++G+TV    G        ++ + ++  +NK       +VD+  +  +D+ G  +++  
Sbjct: 10 TDDGLTVISVEGEIDVYTAPKLREKLIDLVNKGKYH--LLVDMEKVEFLDSTGLGVLVGG 67

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
          +++         +    E++  +  
Sbjct: 68 LKRVRAHDGSLELVCTQERILKIFR 92


>gi|309810818|ref|ZP_07704619.1| STAS domain protein [Dermacoccus sp. Ellin185]
 gi|308435124|gb|EFP58955.1| STAS domain protein [Dermacoccus sp. Ellin185]
          Length = 155

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++GI V  FAG         + D +   +       + +VD+S ++ +D+ G  +++  +
Sbjct: 49  DDGIAVIAFAGEVDVYTAPVLRDAISKVLAA--GDKAMVVDMSEVSFLDSTGLGVLVGRL 106

Query: 63  EKYH 66
           +   
Sbjct: 107 KAVR 110


>gi|291545017|emb|CBL18126.1| anti-anti-sigma factor [Ruminococcus sp. 18P13]
          Length = 110

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +E GI      G        ++ + +   + + +     I+D + +T +D+ G  L+M  
Sbjct: 6  TEEGILRVMLQGEIDHHSAGQLREQIDCRLEELLP-KRLILDFTGVTFMDSSGIGLVMGR 64

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84
                Y G++++   + HI ++  L
Sbjct: 65 VRQAAAYGGQVEIAVPAGHIRKVMQL 90


>gi|254497752|ref|ZP_05110525.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254353045|gb|EET11807.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 93

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70
                  ++   +  A+  +  +D   +DLS +T  D+ G  L++      +K +   +
Sbjct: 11 ELTFRSAVDVRAQLYKALMDN-TNDHFSLDLSDVTHCDSAGMALLIEARKLCKKNNKTFE 69

Query: 71 LQGVSTHIEQLFSLI 85
          + G+S+    L    
Sbjct: 70 IIGMSSETRSLADFC 84


>gi|254509107|ref|ZP_05121209.1| YrbB protein [Vibrio parahaemolyticus 16]
 gi|219547988|gb|EED25011.1| YrbB protein [Vibrio parahaemolyticus 16]
          Length = 102

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++E+    +  +G      +  + + +       + ++   + L  +  +D+ G  ++++
Sbjct: 9  VAED---RYVLSGALDRESVPLLWEQLKQW---DVTANEIELSLEQVKRVDSAGMVMLIH 62

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +E    +     +S   +QL +L   ++ ++ 
Sbjct: 63 LLEHAKKQNCHIMLSFVPKQLKTLFQLSNVEQH 95


>gi|307824958|ref|ZP_07655180.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96]
 gi|307734005|gb|EFO04860.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96]
          Length = 107

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              G        E+ D ++  +    +++   +DLS + EID  G +L++   ++    
Sbjct: 14 IAITGELTIYTALELKDQLLTGLA---EAEELELDLSEVGEIDAAGLQLLVMIKQQAAVS 70

Query: 69 IKLQGVSTHIEQLFSLISFT 88
           K    + H   +  L+  +
Sbjct: 71 GKALSFTGHSPVVLDLLDLS 90


>gi|258622790|ref|ZP_05717808.1| hypothetical protein VMD_28540 [Vibrio mimicus VM573]
 gi|258584978|gb|EEW09709.1| hypothetical protein VMD_28540 [Vibrio mimicus VM573]
          Length = 109

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           F   G      + E+   +        Q     + L  +  ID+ G  L+++ +E    +
Sbjct: 14  FSLIGELDRETVPELWIFLKNW---QPQVKQIEISLKQVVRIDSAGMVLLIHLIEHAKVR 70

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
                +S   EQL +L   ++ + + +Q   +    N
Sbjct: 71  NCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107


>gi|161506128|ref|YP_001573240.1| hypothetical protein SARI_04316 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867475|gb|ABX24098.1| hypothetical protein SARI_04316 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
          Length = 98

 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
              AG      ++ + D  V A      +    +D+S I+ +DT G  L+ + + +   
Sbjct: 13 TLMLAGELDQDVLTPLWDARVEA-----MTGVTRIDMSQISRVDTGGLALLAHLVNQAKK 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     +S   +++++L   
Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87


>gi|262193533|ref|YP_003264742.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365]
 gi|262076880|gb|ACY12849.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365]
          Length = 103

 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             T     G        E++  +   + +  +    +VDLS +  ID+ G   ++   +
Sbjct: 13 GDDTTISITGKLDVLTAPEMSTLIDGLVAE--KRRKVVVDLSGLDLIDSSGVAALVGMYK 70

Query: 64 KYH---GKIKLQGVSTHIEQLFSLISF 87
          +     G + ++G+      +F L+  
Sbjct: 71 RVRAEGGDVTIRGIRDQPLAIFKLLRM 97


>gi|163748820|ref|ZP_02156072.1| hypothetical protein KT99_02762 [Shewanella benthica KT99]
 gi|161331594|gb|EDQ02399.1| hypothetical protein KT99_02762 [Shewanella benthica KT99]
          Length = 102

 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 3/92 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
            +         I  I   +   +          +D S +T +DT GA+L+  F +    
Sbjct: 5  TIKLDSELTIRNIQPIFAQLSELL---THDKELHIDASLLTRVDTAGAQLLYLFSQTCAS 61

Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
          +           +L   +        +   P+
Sbjct: 62 RSLRVDWLNCQPELQINLDNLGINIPEIAIPE 93


>gi|256789772|ref|ZP_05528203.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
          Length = 121

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 9/97 (9%), Positives = 34/97 (35%), Gaps = 3/97 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G+ +   AG         + D ++ ++  +      +VD   +  +D+ G  +++  
Sbjct: 20  TGDGVCLVILAGEVDLDGSGHLRDVLLSSVESAPG---TVVDFGEVGFLDSSGINVLISA 76

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                 +     ++   + +  ++       +    P
Sbjct: 77  HRAAESRGVFFRLAAPRDAVERVLRLVGVDALIPCYP 113


>gi|192361462|ref|YP_001983402.1| STAS domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190687627|gb|ACE85305.1| STAS domain protein [Cellvibrio japonicus Ueda107]
          Length = 101

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
            T   F G      +S++ D +       + S    +DL +++E+DT G +L++    F
Sbjct: 10 DTTTLVFDGELTIYTVSQLKDALFA--EPEVSSAKVALDLQSVSELDTAGVQLLLFIRQF 67

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
                ++ L   +  ++ +FS + 
Sbjct: 68 FSAVAKEVVLAKTNELVDAVFSTLD 92


>gi|225019369|ref|ZP_03708561.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum
          DSM 5476]
 gi|224948000|gb|EEG29209.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum
          DSM 5476]
          Length = 112

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          +G+      G        +I +++   + +S      I+D + +T +D+ G  L+M    
Sbjct: 9  DGVLTAYIMGEIDHHTAKDIREEID-HVAESALPTLLILDFTDVTFMDSSGIGLVMGRYK 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           M++  G+ ++   S HI ++  L     
Sbjct: 68 LMKEIGGETRVTNPSPHINKVMRLAGLDR 96


>gi|308189081|ref|YP_003933212.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1]
 gi|308059591|gb|ADO11763.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1]
          Length = 101

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E   +     G      +  +       I          +D++A+  +D+ G  L+++  
Sbjct: 8  EREASTLLLKGELDRDTLMSLWQQRETLIKDVD-----TIDVAALERVDSSGLALLVHLR 62

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
          E    +      +   ++L SLI+ 
Sbjct: 63 EIARAQGITPRFTGISDKLHSLITL 87


>gi|295399046|ref|ZP_06809028.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius
          C56-YS93]
 gi|312110349|ref|YP_003988665.1| anti-sigma-factor antagonist [Geobacillus sp. Y4.1MC1]
 gi|294978512|gb|EFG54108.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius
          C56-YS93]
 gi|311215450|gb|ADP74054.1| anti-sigma-factor antagonist [Geobacillus sp. Y4.1MC1]
          Length = 116

 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           + + R +G        E+ + V   +  S      +++L  +T +D+ G  +I+     
Sbjct: 12 DVLIIRLSGELDHHTAEELREKVTDVLE-SASIRHIVLNLEHLTFMDSSGLGVILGRYKQ 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          ++K  G++ +  +S  +++LF +
Sbjct: 71 IKKLGGEMIVCSISPTVKRLFDM 93


>gi|302526682|ref|ZP_07279024.1| predicted protein [Streptomyces sp. AA4]
 gi|302435577|gb|EFL07393.1| predicted protein [Streptomyces sp. AA4]
          Length = 186

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/92 (8%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V    G+       ++   V   +  + +    ++DL+ +  + + G  +++    + 
Sbjct: 88  AAVLALNGDLDLGTAPKLTAAVAETV--TGKPPVLVLDLAGVDFLASAGLTVLLAACREA 145

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
               +++ V++    L  +      + +    
Sbjct: 146 PEGTEVRIVASGRATLRPIQLTGLEQSLPLYP 177


>gi|297564138|ref|YP_003683111.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848587|gb|ADH70605.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 157

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 1/83 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +   V    G           + V  A+         ++D + +  ID+ G  +++   +
Sbjct: 53  DAGRVLALDGEIDMATEHRFQEAVTEALTTQP-FGRVVLDCADLRFIDSSGLRVLIRAHK 111

Query: 64  KYHGKIKLQGVSTHIEQLFSLIS 86
               +  +  +++ I ++   + 
Sbjct: 112 AAKEQKAVLAIASPIHRVLQTLR 134


>gi|313669178|ref|YP_004049462.1| hypothetical protein NLA_19050 [Neisseria lactamica ST-640]
 gi|313006640|emb|CBN88106.1| hypothetical protein NLA_19050 [Neisseria lactamica 020-06]
          Length = 83

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 2/78 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              G+     ++   D+      +    ++  VD   +   D+    L++  + +    
Sbjct: 1  MHIGGDITVKTLT--EDEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKDS 58

Query: 69 IKLQGVSTHIEQLFSLIS 86
          I L G+   +  L  L  
Sbjct: 59 IGLTGIPESVRALSELYE 76


>gi|307609636|emb|CBW99141.1| hypothetical protein LPW_09261 [Legionella pneumophila 130b]
          Length = 93

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70
                +  + D +  A+ +  +     +DLS +T  D+ G  LI+      ++ +    
Sbjct: 11 ELTFKSVVSVRDKLYKALMEDTRER-FCLDLSEVTHCDSAGLALIIEARKLCKQNNKVFD 69

Query: 71 LQGVSTHIEQLFSLI 85
          + G+S   + L    
Sbjct: 70 VIGISPETQSLAEFC 84


>gi|329297308|ref|ZP_08254644.1| anti-sigma B factor antagonist [Plautia stali symbiont]
          Length = 101

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 5/82 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           +    +G      +  +          S  +    +D++A+  +D+ G  L+++  E  
Sbjct: 11 ASTLALSGKLDRDTLLALWQ-----GRDSAMAGITTIDVAALDRVDSAGLALLVHLREIA 65

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
            +      S   ++L SLI  
Sbjct: 66 RAQGTTPLFSCITDKLDSLIKL 87


>gi|260779431|ref|ZP_05888322.1| putative anti-sigma B factor antagonist [Vibrio coralliilyticus
          ATCC BAA-450]
 gi|260604521|gb|EEX30821.1| putative anti-sigma B factor antagonist [Vibrio coralliilyticus
          ATCC BAA-450]
          Length = 102

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +S++    ++  G      +  +   +    N  + S +  + L  +  +D+ G  ++++
Sbjct: 9  VSDD---HYQITGALDRESVPALWRSL---CNWKVTSSTIEISLEQVERVDSAGMVMLIH 62

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +E    +     +S   +QL +L   ++ ++ 
Sbjct: 63 LLEHAKKQNCHIMLSFVPKQLLTLFQLSNVEEF 95


>gi|59802418|ref|YP_209130.1| hypothetical protein NGO2120 [Neisseria gonorrhoeae FA 1090]
 gi|240013252|ref|ZP_04720165.1| hypothetical protein NgonD_01145 [Neisseria gonorrhoeae DGI18]
 gi|240015699|ref|ZP_04722239.1| hypothetical protein NgonFA_00778 [Neisseria gonorrhoeae FA6140]
 gi|240112042|ref|ZP_04726532.1| hypothetical protein NgonM_00390 [Neisseria gonorrhoeae MS11]
 gi|240114789|ref|ZP_04728851.1| hypothetical protein NgonPID1_00788 [Neisseria gonorrhoeae PID18]
 gi|240120324|ref|ZP_04733286.1| hypothetical protein NgonPI_00825 [Neisseria gonorrhoeae PID24-1]
 gi|240124815|ref|ZP_04737701.1| hypothetical protein NgonSK_01085 [Neisseria gonorrhoeae
          SK-92-679]
 gi|254492851|ref|ZP_05106022.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260441398|ref|ZP_05795214.1| hypothetical protein NgonDG_10010 [Neisseria gonorrhoeae DGI2]
 gi|268598100|ref|ZP_06132267.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268600443|ref|ZP_06134610.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268683394|ref|ZP_06150256.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|293397852|ref|ZP_06642058.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62]
 gi|59719313|gb|AAW90718.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226511891|gb|EEH61236.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268582231|gb|EEZ46907.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268584574|gb|EEZ49250.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268623678|gb|EEZ56078.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|291611798|gb|EFF40867.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62]
          Length = 92

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+     ++   D       +    ++  VD   +   D+    L++  +    G
Sbjct: 9  TLHIGGDITVKTLTG--DAFGRFRQQCRLKETIAVDFGGVKRADSACMSLLLEVLRGCKG 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           ++L G+   +  L  L  
Sbjct: 67 SVRLTGIPESVRALSELYE 85


>gi|290959552|ref|YP_003490734.1| anti-sigma-factor-binding protein [Streptomyces scabiei 87.22]
 gi|260649078|emb|CBG72192.1| putative anti-sigma-factor-binding protein [Streptomyces scabiei
           87.22]
          Length = 162

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
            V   +G        ++   V  A+       S ++DL+ +   D+ G  +++     M 
Sbjct: 43  AVLHVSGEMDLLTSPQLRQRVHEAVAD--GRRSLVLDLTDVVFCDSSGVGVLVATRRLMR 100

Query: 64  KYHGKIKLQ 72
              G+++L 
Sbjct: 101 SCRGRLRLI 109


>gi|218289602|ref|ZP_03493822.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius LAA1]
 gi|258511713|ref|YP_003185147.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|218240252|gb|EED07435.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius LAA1]
 gi|257478439|gb|ACV58758.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 114

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
           E GI V    G      + ++ D +   + +       ++    I  +D+ G  LI+   
Sbjct: 8   ERGIVVIELKGELDHHAVEQMRDRIEQQLAEH-GYRGLVMSFRNIDFMDSSGLGLILGRY 66

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
             + ++ GK+ L  V+  + +LF +        + + +  
Sbjct: 67  RSVSEHGGKMALCEVNPTLRRLFEMSGLLKVIPVYDSEEA 106


>gi|108797387|ref|YP_637584.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119866471|ref|YP_936423.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
 gi|108767806|gb|ABG06528.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS]
 gi|119692560|gb|ABL89633.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS]
          Length = 113

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +++G+ V R  G         +   +   ++    S   +VDLSA   ID+ G   ++  
Sbjct: 9  TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSARVVVDLSATEFIDSSGLGALISG 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
          ++          ++    Q+ +++  T
Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELT 93


>gi|27364138|ref|NP_759666.1| putative anti-sigma B factor antagonist [Vibrio vulnificus CMCP6]
 gi|37678643|ref|NP_933252.1| putative anti-sigma B factor antagonist [Vibrio vulnificus YJ016]
 gi|320157523|ref|YP_004189902.1| ABC transporter auxiliary component YrbC [Vibrio vulnificus
          MO6-24/O]
 gi|27360256|gb|AAO09193.1| Putative anti-sigma B factor antagonist [Vibrio vulnificus CMCP6]
 gi|37197383|dbj|BAC93223.1| putative anti-sigma B factor antagonist [Vibrio vulnificus YJ016]
 gi|319932835|gb|ADV87699.1| uncharacterized ABC transporter, auxiliary component YrbC [Vibrio
          vulnificus MO6-24/O]
          Length = 105

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +GN    ++  +      A     ++      L  +  +D+ G  ++++ +E    +
Sbjct: 14 VSLSGNLDREQVPSLWRF---AQTWKPRNSQVEFSLKTVQRVDSAGMVMLIHLLEHAKKQ 70

Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93
               +S    QL +L   ++ + +
Sbjct: 71 NCHIMLSFVPAQLRTLFQLSNVEAV 95


>gi|23016440|ref|ZP_00056196.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of
          anti-sigma factor) [Magnetospirillum magnetotacticum
          MS-1]
          Length = 108

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 6/91 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +    T+   +G         +   ++  +   ++     VDLS +  ID+ G   ++  
Sbjct: 7  AAGASTIMTLSGEVDLRHSPTLRKALMDLM---LEKRPVAVDLSRVEYIDSSGIAGLVEA 63

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
               K   +  L  +S  + ++  L     
Sbjct: 64 YQMARKNDTRFVLAAISDPVRRVLQLSRLDR 94


>gi|90413010|ref|ZP_01221008.1| hypothetical anti-sigma B factor antagonist [Photobacterium
          profundum 3TCK]
 gi|90326025|gb|EAS42464.1| hypothetical anti-sigma B factor antagonist [Photobacterium
          profundum 3TCK]
          Length = 103

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
            +G  +   +               Q     +DLS ++ +D+ G  ++++  ++     
Sbjct: 17 CLSGVLERDTVPAFWQQ---RCEWMPQGSKVTLDLSGLSRVDSAGMVMLLHLSQQLITAG 73

Query: 70 KLQGVSTHIEQLFSLISFTHRKKI 93
              +    EQL +L+  +H + +
Sbjct: 74 CDFTLLNVPEQLKTLLRLSHVESM 97


>gi|126433008|ref|YP_001068699.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
 gi|126232808|gb|ABN96208.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS]
          Length = 113

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +++G+ V R  G         +   +   ++    S   +VDLSA   ID+ G   ++  
Sbjct: 9  TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSTRVVVDLSATEFIDSSGLGALISG 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
          ++          ++    Q+ +++  T
Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELT 93


>gi|183220963|ref|YP_001838959.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189911058|ref|YP_001962613.1| antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167775734|gb|ABZ94035.1| Antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167779385|gb|ABZ97683.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 113

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60
              +    GN       +I  D++  ++ S    S I +LS +  I + G  L+   + 
Sbjct: 14 GNKMIVHVQGNLDVHNTHKIEKDLLTLVSSS--GKSVIFNLSEVPFISSAGLRLLVTTLR 71

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87
            ++    I + G+   +E++F +I  
Sbjct: 72 HCQEQKISIAICGLQPAVEKVFDIIGM 98


>gi|150389980|ref|YP_001320029.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF]
 gi|149949842|gb|ABR48370.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF]
          Length = 111

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          + + + +F G        EI  ++   I +       I+DLS +T +D+ G  +I+    
Sbjct: 9  DHVLIVKFTGELDHHVAEEIRGELDETIAQKRM-KHLILDLSEMTFMDSSGIGVIIGRYK 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           + K  GK+ +  V   I ++F L    H
Sbjct: 68 NITKLGGKVAVINVPEKINKIFKLAGLYH 96


>gi|152968066|ref|YP_001363850.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216]
 gi|151362583|gb|ABS05586.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216]
          Length = 136

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 22/77 (28%), Gaps = 3/77 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            T     G   +    ++ +    A+          VD   +T +D+ G   +     + 
Sbjct: 33  ATRVVLTGEIDAELGPDLLEAAEDALAS---GRPLQVDAHHVTFMDSTGLAFLARLASRS 89

Query: 66  HGKIKLQGVSTHIEQLF 82
            G+         + +  
Sbjct: 90  KGRRVTLIRPPAVVKFL 106


>gi|295103336|emb|CBL00880.1| anti-anti-sigma factor [Faecalibacterium prausnitzii SL3/3]
          Length = 107

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 4/87 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +         AG         +   +  A+       + I+DL  +  +D+ G  LI+  
Sbjct: 8  AAGETLYAYLAGEIDHDAAQSLRMQLDDALVSR-SPRTLIIDLGGVGFMDSSGIGLILGR 66

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85
                    ++LQ     ++++  L 
Sbjct: 67 QRCARVLGTTLRLQHAPAQLQKVLRLA 93


>gi|21219304|ref|NP_625083.1| anti sigma factor antagonist [Streptomyces coelicolor A3(2)]
 gi|11071273|emb|CAC14346.1| putative anti sigma factor antagonist [Streptomyces coelicolor
           A3(2)]
          Length = 166

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 2/112 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G TV  F G       +EIA  +     +       ++DL  I   D  G  L+     +
Sbjct: 57  GHTVLEFRGEIDIASAAEIAPYLDRETGR--PGARVVLDLDGIEFFDCSGLRLLYRARSQ 114

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
                    +         ++  T   ++    P         +      G+
Sbjct: 115 VLDGGGQVRLVCTHALTLRMLRITGLARLLPPWPTLDEALGVSRPAGRRTGR 166


>gi|312200150|ref|YP_004020211.1| anti-anti-sigma factor [Frankia sp. EuI1c]
 gi|311231486|gb|ADP84341.1| anti-anti-sigma factor [Frankia sp. EuI1c]
          Length = 125

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 42/99 (42%), Gaps = 5/99 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V R  G+     +  + + ++ A  +       +VDL+ +  +D+ G  +I+Y   + 
Sbjct: 14  AIVIRPEGDIDYSSLDPLREALMDA--RMAGVSEIVVDLAEVGFLDSQGLAVILYAHRRQ 71

Query: 66  H---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
               G++ L+ ++    +L  + + T   +++    +  
Sbjct: 72  RSTGGRLILRNLNDMACRLLHVTNLTAVLEVEGGVREPP 110


>gi|187930302|ref|YP_001900789.1| putative signal peptide protein [Ralstonia pickettii 12J]
 gi|187727192|gb|ACD28357.1| putative signal peptide protein [Ralstonia pickettii 12J]
          Length = 103

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 7/81 (8%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66
             +G     E   +  +    + ++ ++   +  VD + ++++D+    +++ +     
Sbjct: 2  LTLSGPLTHREAPRVLREGEALLGQAREAGLAALHVDCAGLSQVDSSALAVLLSWQRTAQ 61

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
                 +    + L +L + 
Sbjct: 62 DAGIALDIGGAPQALSNLATL 82


>gi|94969770|ref|YP_591818.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551820|gb|ABF41744.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis
           Ellin345]
          Length = 116

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +  + V R  G        E+   V   I+ S      ++D + +T +D+ G   I+  +
Sbjct: 17  DAAVPVVRCTGRLVLGLTDELLLPVKQLISAS---KRIVLDFTELTRMDSSGLGTIVRLL 73

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +     ++L+ V   I QL  + +   
Sbjct: 74  VTAKAAGCSLELKNVGPPIRQLLGITNLLD 103


>gi|254381596|ref|ZP_04996960.1| hypothetical protein SSAG_01262 [Streptomyces sp. Mg1]
 gi|194340505|gb|EDX21471.1| hypothetical protein SSAG_01262 [Streptomyces sp. Mg1]
          Length = 108

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 7/64 (10%), Positives = 19/64 (29%), Gaps = 2/64 (3%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                AG        ++   +             ++DL  ++  D+ G +L +    + 
Sbjct: 17 GLRVSLAGELDLYTAEQVGPRLRELAGS--GHRDIVLDLCGLSFCDSAGIDLFIRLHRRC 74

Query: 66 HGKI 69
            + 
Sbjct: 75 RAEG 78


>gi|269126377|ref|YP_003299747.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
 gi|268311335|gb|ACY97709.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183]
          Length = 170

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 24/85 (28%), Gaps = 2/85 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMA--INKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +G  V    G      +  +   +        +      ++D S +   D  G   ++  
Sbjct: 59  DGTLVAAVTGEIDLRTVRALRARLSELGRQATAGGGGRLVLDFSGVGFCDAGGLGALVGV 118

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLIS 86
             +   +     ++    Q + L  
Sbjct: 119 RNELRARGGELSLARVRPQQWRLFQ 143


>gi|218550474|ref|YP_002384265.1| hypothetical protein EFER_3168 [Escherichia fergusonii ATCC
          35469]
 gi|218358015|emb|CAQ90661.1| conserved hypothetical protein [Escherichia fergusonii ATCC
          35469]
 gi|324115205|gb|EGC09169.1| hypothetical protein ERIG_00081 [Escherichia fergusonii B253]
 gi|325498772|gb|EGC96631.1| hypothetical protein ECD227_2869 [Escherichia fergusonii ECD227]
          Length = 97

 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
              AG      ++ + ++        +      +DLS I  +DT G  L+++     ++
Sbjct: 13 TLALAGELDQDVLNPLWEE-----RNEVMQGVTCIDLSKIARVDTGGLALLIHLIDIAKR 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
              + L+GV+  +  L  L + 
Sbjct: 68 QGNSVTLRGVNEKVYTLAKLYNL 90


>gi|29827643|ref|NP_822277.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29604743|dbj|BAC68812.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
           MA-4680]
          Length = 131

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 30/89 (33%), Gaps = 4/89 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKS----IQSDSAIVDLSAITEIDTIGAEL 57
           +++ + V R AG+              + + +         +  +D + ++ +D++G   
Sbjct: 15  ADSTVAVVRVAGDLDYESCHAFVRATELLLAERRETGPPLSALRLDFAELSSVDSMGLSA 74

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLIS 86
           ++    +         +      L  L+ 
Sbjct: 75  LLMVRRRTDAAGVSLYLDERPACLERLLE 103


>gi|295102466|emb|CBL00011.1| anti-anti-sigma factor [Faecalibacterium prausnitzii L2-6]
          Length = 108

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 4/88 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          + + +     AG         +   +  A+  +      ++DL  +  +D+ G  LI+  
Sbjct: 8  AADDVLYAYLAGEIDHDAAQGLRIQLDDALL-TRSPRILVMDLGGVGFMDSSGIGLILGR 66

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLIS 86
                  G +++Q     + ++  L S
Sbjct: 67 QRCARTLGGSLRIQHAPEQLRRVLQLAS 94


>gi|319788636|ref|YP_004148111.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1]
 gi|317467148|gb|ADV28880.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1]
          Length = 103

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 7/93 (7%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
           V    G      +  +   +     + +   +  ++L AI  +D+ G  L+     +   
Sbjct: 16  VLHLEGRLDRAAVVALWPRL-----QPLVDGARTLELGAIQSLDSAGLALLAETAARMRA 70

Query: 67  -GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
            G +++ G +  + +L +      +       P
Sbjct: 71  SGPVQVGGDAPGLAELRAAYRLDPQLNYAGAPP 103


>gi|109896885|ref|YP_660140.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c]
 gi|109699166|gb|ABG39086.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c]
          Length = 110

 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 11  FAGNWKSPEISEIADD-VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
            +GN     I     D +    N    +   +++L  IT+IDT G   ++  +     + 
Sbjct: 23  LSGNLNRDTIPNFWPDSLQQLTNAKRTNKPLVLNLEKITQIDTAGLAWLINLIRDAKKQD 82

Query: 70  KLQGVSTHIEQLFSLISFTH 89
               +    + L +L   + 
Sbjct: 83  IEFSLLNPPDTLLNLAKISD 102


>gi|261401683|ref|ZP_05987808.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
 gi|269208209|gb|EEZ74664.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
          Length = 92

 Score = 40.0 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G+     ++   +       +    ++  VD   +   D+    L++  + +   
Sbjct: 9  ILHIGGDITVKTLTG--EAFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKD 66

Query: 68 KIKLQGVSTHIEQLFSLIS 86
           I L G+   +  L  L  
Sbjct: 67 SIGLTGIPESVRALSELYE 85


>gi|269793476|ref|YP_003312931.1| anti-anti-sigma factor [Sanguibacter keddieii DSM 10542]
 gi|269095661|gb|ACZ20097.1| anti-anti-sigma factor [Sanguibacter keddieii DSM 10542]
          Length = 124

 Score = 40.0 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +++G TV   AG   +   +         +   + +   ++D+ A++ ID+ G   ++  
Sbjct: 21  TDDGATVVTLAGEIDA---ALRDQAGEAMVAVVLHNAPVVIDVGAVSFIDSSGLAFLVQL 77

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLI 85
                       +    + L  LI
Sbjct: 78  HRLCSESDLPLELLDPSDNLLELI 101


>gi|317123917|ref|YP_004098029.1| anti-anti-sigma factor [Intrasporangium calvum DSM 43043]
 gi|315588005|gb|ADU47302.1| anti-anti-sigma factor [Intrasporangium calvum DSM 43043]
          Length = 122

 Score = 40.0 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          +   + +G      + E+   +   +         I+DL   T +D+    ++    ++ 
Sbjct: 16 VRHVQVSGEIDLANVDEVRQAITTELADDPA--RVILDLRGTTYLDSAAIAMLFRLAQRL 73

Query: 66 H-GKIKLQGVSTHIEQLFSLISFT 88
             +  L  V      + +++  T
Sbjct: 74 GHRRQDLALVVPRDAPIRAVLELT 97


>gi|229822115|ref|YP_002883641.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
 gi|229568028|gb|ACQ81879.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
          Length = 115

 Score = 40.0 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70
            G+       +           +++    ++D S IT +D+ GA  ++   +    +  
Sbjct: 15 IEGDLDLSTRPQFHAATAKL--GAVRRPLLVIDASRITFLDSTGAAFLISLADATRKRGG 72

Query: 71 LQGVSTHIEQLFSLISF 87
             +    E++  ++  
Sbjct: 73 AAVLRGADERVLFVLET 89


>gi|297204118|ref|ZP_06921515.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197714783|gb|EDY58817.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 124

 Score = 40.0 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 9/110 (8%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAI-----NKSIQSDSAIVDLSAITEIDTIGAE 56
           + +GI V    G+       ++ D +  A+         Q+   + DLS +T +D+ G  
Sbjct: 19  TADGIRVVTLRGDID----HDVKDALTTALLPPDGADDGQAPRVVADLSGVTFLDSTGIN 74

Query: 57  LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
           + +   ++         ++   E +  +        +    P      N 
Sbjct: 75  VFVQVHQQVSTAQGWLRLAAARESVTRVFELVGLDTVIACHPTVEQALNP 124


>gi|21233048|ref|NP_638965.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66766921|ref|YP_241683.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188989994|ref|YP_001902004.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21114898|gb|AAM42889.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572253|gb|AAY47663.1| anti-sigma F factor antagonist [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731754|emb|CAP49934.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris]
          Length = 139

 Score = 40.0 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 12/110 (10%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++       +G   +    ++ + +   +   I   + ++DL+ +  I + G   I    
Sbjct: 12  QDTRQRVTLSGRLDTHTFHDLDEALSPLLATPIT--TLVLDLADLEYISSAGIRSIFKAR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +     HGK+ +      I ++F ++       +     +   + ++ + 
Sbjct: 70  KALATRHGKVLVAHPQPQIRKVFDMVKAVPLSDVFASTEELDAYLSTMQR 119


>gi|296133161|ref|YP_003640408.1| anti-sigma-factor antagonist [Thermincola sp. JR]
 gi|296031739|gb|ADG82507.1| anti-sigma-factor antagonist [Thermincola potens JR]
          Length = 111

 Score = 40.0 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64
          + + +  G++       I   +   +++ +   + ++DLS +  ID+ G  +I+   ++ 
Sbjct: 11 VLLVKLTGDFDMAVADNIRCHIDKQLDEGL-VKNVVLDLSDVGFIDSSGLGVILGRYKRI 69

Query: 65 --YHGKIKLQGVSTHIEQLFSL 84
              GK+ + G    + ++  L
Sbjct: 70 SQLGGKMAIIGAQPQVNRILEL 91


>gi|227498776|ref|ZP_03928918.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904230|gb|EEH90148.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 677

 Score = 40.0 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 53/189 (28%), Gaps = 12/189 (6%)

Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198
                   + +     + +  +  V VS         F  G  +   G    +      F
Sbjct: 47  LWHTFRYGFWWGMDFNAYVFLISLVLVSLPGAFFPAYFALGNTLRLVGGLLYALVLYLAF 106

Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258
              ++      +I      +       + +         +++  A   +G+     L   
Sbjct: 107 MGKMLYYSHFHDIYNQTMKLGAHAEKHNLVDIFF-----HQDHGAWILLGIVPYLYLCRL 161

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA-----TLANIFTG 313
            + A  + LP L+  A  S  +  +     +     A ++ R+  T         +    
Sbjct: 162 ALLA-FLGLPSLSYPAIASPFLRCAFNTVVFLLCIAAFYWFRYGGTFWHDDKPEWDTIPS 220

Query: 314 LIKA-PFMA 321
           L+K   F A
Sbjct: 221 LVKKDIFFA 229


>gi|330505443|ref|YP_004382312.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          mendocina NK-01]
 gi|328919729|gb|AEB60560.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          mendocina NK-01]
          Length = 106

 Score = 40.0 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          +    G      +SE  + ++ A+     +    +DLSA+ E+D  G +L++   ++   
Sbjct: 12 ILPLEGGLTIYSVSEHMELLMRALA---PAAEVELDLSALDEVDCAGLQLLVLAKQEASR 68

Query: 68 KIKLQGVSTHIEQLFSLISFT 88
          +     +S H   +      +
Sbjct: 69 QGCQLRLSHHSPAVIEAFELS 89


>gi|183220711|ref|YP_001838707.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189910812|ref|YP_001962367.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167775488|gb|ABZ93789.1| AntiSigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167779133|gb|ABZ97431.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 102

 Score = 40.0 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60
          EN   +    G+    +  ++  ++   I+        ++D   ++ +D+ G  ++++  
Sbjct: 9  ENEKVIIILNGSLSLRDTPKLKTEIKELIDSD-SIKELVLDFKYLSYLDSSGIGILLHTY 67

Query: 61 -FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           + ++ + K+K+  VS  I+ +FS+ +   
Sbjct: 68 SWTKEKNKKVKMVHVSNEIKTIFSVANLLE 97


>gi|328880525|emb|CCA53764.1| anti-sigma factor antagonist [Streptomyces venezuelae ATCC 10712]
          Length = 130

 Score = 40.0 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                V    G         + + +  A+ +  +    +VD + +   D+ G  L++   
Sbjct: 25  SGATAVVTVTGELDRDTQEPLREALAGALERRPE--RIVVDCAQLAFCDSTGLNLLLTTR 82

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
               +  G ++L  +S  + ++F +        +  + P
Sbjct: 83  LEAIEAGGALELAALSPPVARVFDITGVIAVFTVYEELP 121


>gi|162450986|ref|YP_001613353.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56']
 gi|161161568|emb|CAN92873.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56']
          Length = 287

 Score = 40.0 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           + + V    G        ++A+ ++  I     +   IVDL+ ++  DT  A  +    +
Sbjct: 178 DEVLVLPLIGTLDERRSQQLAEALLDKIADK-GAQCCIVDLTGVSAFDTRAASALARIAQ 236

Query: 64  K---YHGKIKLQGVSTHIEQLFSLIS 86
                  ++ L G+   + Q    + 
Sbjct: 237 AVRLLGVEVVLTGIRPEVAQALIGLE 262


>gi|284044901|ref|YP_003395241.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283949122|gb|ADB51866.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 112

 Score = 40.0 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 4   NGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
           +G TV     G        ++  ++      +    + ++DL  +  +D+ G  +++   
Sbjct: 11  DGTTVRLALEGELDIASAGQVERELTRIETDAP--PTLMLDLRRLAFMDSTGLRIVVAAD 68

Query: 62  --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
               +   ++ +      ++++F +     R ++ ++ 
Sbjct: 69  ARAREQSRRLVVVRGPEAVQRIFRMTRLDERLEMVDEP 106


>gi|171058218|ref|YP_001790567.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
 gi|170775663|gb|ACB33802.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6]
          Length = 110

 Score = 40.0 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 29/96 (30%), Gaps = 1/96 (1%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           F   G       +E    ++ A+          +DL  I   D+ G +L++    +    
Sbjct: 12  FALGGELCIQTAAEQRQVLIDALG-QADGRDLALDLHEIHGCDSAGVQLLLATRLQLQRS 70

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104
            +   +      +  ++     + + +  P      
Sbjct: 71  GRRLHLEALSPVVREVLRTYGLQALFDSPPTPGDRR 106


>gi|268318116|ref|YP_003291835.1| sulfate transporter [Rhodothermus marinus DSM 4252]
 gi|262335650|gb|ACY49447.1| sulfate transporter [Rhodothermus marinus DSM 4252]
          Length = 591

 Score = 40.0 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 36/113 (31%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G+ + R   ++       + D ++          + ++D S+I ++DT  A  +    E 
Sbjct: 456 GLLLLRVDASFSFANADFLQDLLLDRTRDDPSIRAVVIDASSINDLDTTAAAALQRVAET 515

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
              +      +   E +   +       +          + +  ++    G+ 
Sbjct: 516 LADRGVALYFAGVKEPVMETMRRAGLVDLLGADHFFLTPHRAVLHILEQWGQA 568


>gi|325928342|ref|ZP_08189538.1| anti-anti-sigma factor [Xanthomonas perforans 91-118]
 gi|325541276|gb|EGD12822.1| anti-anti-sigma factor [Xanthomonas perforans 91-118]
          Length = 139

 Score = 40.0 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G   +    ++   +   +   I   + ++DLSA+  I + G   I    
Sbjct: 12  QDTRQRVTLTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +      GK+ +      I ++F ++       +     +   +  + + 
Sbjct: 70  KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119


>gi|261342636|ref|ZP_05970494.1| putative STAS domain protein [Enterobacter cancerogenus ATCC
          35316]
 gi|288315284|gb|EFC54222.1| putative STAS domain protein [Enterobacter cancerogenus ATCC
          35316]
          Length = 97

 Score = 40.0 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
            +  G      ++ + D  V A+         ++DL+++T +DT G  ++ + +   +K
Sbjct: 13 TLKLKGELDQDLLNPLWDARVDAMK-----GVTLIDLNSVTRVDTAGVAMLAHLVAVGKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
          +  +++L G S ++  L  L +       +
Sbjct: 68 HGTQVRLAGASDNVVTLAQLYNLPDDVLPR 97


>gi|294814258|ref|ZP_06772901.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC
          27064]
 gi|294326857|gb|EFG08500.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC
          27064]
          Length = 147

 Score = 40.0 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
          TV    G        E+   V  A+         ++DL+ +   D+ G  +++     + 
Sbjct: 33 TVLHIRGELDLLSSPEVRRQVHAAVAA--GRRDVVLDLTDVVFCDSSGVGVLIAARRLLN 90

Query: 64 KYHGKIKLQ 72
             G+++L 
Sbjct: 91 SCGGRLRLV 99


>gi|328944333|ref|ZP_08241797.1| hypothetical protein HMPREF0091_11022 [Atopobium vaginae DSM 15829]
 gi|327491252|gb|EGF23027.1| hypothetical protein HMPREF0091_11022 [Atopobium vaginae DSM 15829]
          Length = 247

 Score = 40.0 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 36/107 (33%), Gaps = 2/107 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           I V    G+     ++  +  +   + +       I++L+ ++ ID+ G  L+   M + 
Sbjct: 7   IVVIPLKGDLDVTTVASASALIDSFLYREY--PRMILNLADVSFIDSSGMGLLWSTMRRI 64

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
                +  +     Q+ +++           +   +F        H 
Sbjct: 65  RAHQGIISMINVQPQVLAILRRARMLDFIPLRNSDAFCQKDMFQPHA 111


>gi|308233540|ref|ZP_07664277.1| anti-sigma-factor antagonist [Atopobium vaginae DSM 15829]
          Length = 247

 Score = 40.0 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 36/107 (33%), Gaps = 2/107 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           I V    G+     ++  +  +   + +       I++L+ ++ ID+ G  L+   M + 
Sbjct: 7   IVVIPLKGDLDVTTVASASALIDSFLYREY--PRMILNLADVSFIDSSGMGLLWSTMRRI 64

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
                +  +     Q+ +++           +   +F        H 
Sbjct: 65  RAHQGIISMINVQPQVLAILRRARMLDFIPLRNSDAFCQKDMFQPHA 111


>gi|256379365|ref|YP_003103025.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255923668|gb|ACU39179.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 138

 Score = 40.0 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 38/106 (35%), Gaps = 3/106 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+TV R  G         +  +V   I +     + ++DL  +  + + G  +++   +
Sbjct: 36  DGVTVVRVTGEVDMLTAPRLRSEV---IERITTGGTLVLDLGGVGFLGSAGLAVLVEAAQ 92

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +   +     V      +   ++ T   ++ +  P  +      + 
Sbjct: 93  RSTREQAAFRVVAVERAVLRPLAATGLGEVFSVHPSVAEALGGDRG 138


>gi|302916667|ref|XP_003052144.1| hypothetical protein NECHADRAFT_92694 [Nectria haematococca mpVI
            77-13-4]
 gi|256733083|gb|EEU46431.1| hypothetical protein NECHADRAFT_92694 [Nectria haematococca mpVI
            77-13-4]
          Length = 1018

 Score = 40.0 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 7/194 (3%)

Query: 125  SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184
              +   +LG+++  T E     Y +    +  I  + ++      VV ++    G ++  
Sbjct: 817  LLASLVLLGILVLFTTEERRPKYHYMLCFMGFIISIAWISTIAGEVVGVLK-TVGVILNI 875

Query: 185  -QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA-----GRSGSAIVAEIGSMKIN 238
             +    L+ F A     DL++ + +  +G  + A+              I      M I 
Sbjct: 876  SEALLGLTIFAAGNSVGDLVADITVARLGYPVMALSACFGGPMLNILLGIGIGGAMMMIQ 935

Query: 239  EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298
            +     R      ++           + +  +T+L     ++    +             
Sbjct: 936  KANKKHRKDPSHPIKYKPYRIQVGGTLMISAITLLVMLVGLLIVVPMNKWILSRKIGWGL 995

Query: 299  SRFHSTATLANIFT 312
                + +T+ N+  
Sbjct: 996  IALWAVSTIVNVVV 1009


>gi|262401807|ref|ZP_06078372.1| putative anti-sigma B factor antagonist [Vibrio sp. RC586]
 gi|262351779|gb|EEZ00910.1| putative anti-sigma B factor antagonist [Vibrio sp. RC586]
          Length = 109

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 3/104 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +    F   G      + E+   +        Q     + L  +  ID+ G  L+++ 
Sbjct: 7   SADSEQQFSLIGELDRETVPELWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHL 63

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           +E    +     +S   EQL +L   ++ + + +Q   +    N
Sbjct: 64  IEHAKVRNCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107


>gi|295401208|ref|ZP_06811181.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius
          C56-YS93]
 gi|312109446|ref|YP_003987762.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacillus
          sp. Y4.1MC1]
 gi|294976801|gb|EFG52406.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius
          C56-YS93]
 gi|311214547|gb|ADP73151.1| Sulfate transporter/antisigma-factor antagonist STAS [Geobacillus
          sp. Y4.1MC1]
          Length = 102

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 3/91 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +     +  G+        I ++++  + K        ++ + I  +D+ G  L+M  +
Sbjct: 8  SDEYLEVKLVGDLDIDGTEIIEEELIPHLEKY---RMVNLNFAGIQFVDSTGMGLLMNMV 64

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
          ++   K     +S   + + ++       +I
Sbjct: 65 QRLKEKGIKVTISDVQQDVMNVFEILQLPEI 95


>gi|226329323|ref|ZP_03804841.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198]
 gi|225202509|gb|EEG84863.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198]
          Length = 91

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          V  F G      +  +       +     +D  I+D+SA+  ID+ G  L ++    ME+
Sbjct: 7  VLYFQGTLDRETLLSVWQQRKALL-----ADINIIDISALGHIDSTGLALFVHLKAEMEE 61

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
           + +  +QGVS   + L +L     
Sbjct: 62 RNRQFIIQGVSERFQTLITLYDLDE 86


>gi|120402929|ref|YP_952758.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
 gi|119955747|gb|ABM12752.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
          Length = 104

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 23/56 (41%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
          ++G       G      +++ ++ +  A+          +DLSA+  +D+    ++
Sbjct: 14 DDGSVALTAVGELDLSNVADFSEAIDAAVTAGTDGAPLHIDLSAVDYLDSGAINVL 69


>gi|218778831|ref|YP_002430149.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans
          AK-01]
 gi|218760215|gb|ACL02681.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans
          AK-01]
          Length = 125

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64
          +    G+  +   S++   V   +  S        D+  +  + + G  +I+     +EK
Sbjct: 16 IIHLGGSLDTVTASQLDKKVDEVLTGSPAH--LTFDMENLEYMSSAGVRVILKASKGLEK 73

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHR 90
            GK     +   I+++F +I     
Sbjct: 74 NKGKTTFVNLQPQIKKVFEIIRAMPD 99


>gi|269137866|ref|YP_003294566.1| putative anti-sigma B factor antagonist [Edwardsiella tarda
          EIB202]
 gi|267983526|gb|ACY83355.1| putative anti-sigma B factor antagonist [Edwardsiella tarda
          EIB202]
 gi|304557919|gb|ADM40583.1| anti-sigma-factor antagonist [Edwardsiella tarda FL6-60]
          Length = 104

 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 6/91 (6%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-KY 65
                G  +   +  +         +++ +D   VD+S ++ +D+ G  L+++    + 
Sbjct: 14 ATLYLQGALECDSLDALWQQ-----RQTLLTDITCVDISELSRVDSAGLALLLHVQNLRP 68

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
             I L+GVS  +  L +L +          
Sbjct: 69 ETPIPLRGVSERLRTLITLYNLQDIVVCAAP 99


>gi|310766234|gb|ADP11184.1| Anti-sigma B factor antagonist [Erwinia sp. Ejp617]
          Length = 98

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R  G  +   +  +       + +        +D+SA+  +D+ G  L+++  +     
Sbjct: 14 LRLIGELERETLLPLWQQREAVMERVE-----TIDVSALERVDSGGLALLVHLRQIAIDN 68

Query: 69 IKLQGVSTHIEQLFSLISF 87
           +    S   ++L SLI+ 
Sbjct: 69 GRKPRFSGVTDKLNSLITL 87


>gi|21245055|ref|NP_644637.1| hypothetical protein XAC4343 [Xanthomonas axonopodis pv. citri
          str. 306]
 gi|21110786|gb|AAM39173.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
          str. 306]
          Length = 96

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++ +       +DLS +  +D+ G  ++     +   
Sbjct: 12 TLVITGVLDRAAVTAAWPQAIAQLDGARA-----LDLSGVQRLDSAGVAMLAELAARLRQ 66

Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           G  ++ G ++ +++L +    +     +
Sbjct: 67 AGSGEVVGEASGLDELRAAYRLSPTLDFQ 95


>gi|323702538|ref|ZP_08114201.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM
          574]
 gi|323532512|gb|EGB22388.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM
          574]
          Length = 112

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
              + R  G        E+   +   +++  ++   I++LS +T ID+ G  +I+   +
Sbjct: 9  ENTLLVRLGGELDLGVADELRLALDKLLHEK-KAKHLILNLSRVTFIDSSGLGVILGRYK 67

Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTH 89
          +     G+I L G    ++++  L     
Sbjct: 68 RLVQQGGQIILVGAQPPVKRILELSGLLQ 96


>gi|258625816|ref|ZP_05720695.1| hypothetical protein VMB_19960 [Vibrio mimicus VM603]
 gi|258582054|gb|EEW06924.1| hypothetical protein VMB_19960 [Vibrio mimicus VM603]
          Length = 109

 Score = 39.6 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           F   G      + E+   +        Q     + L  +  ID+ G  L+++ +E    +
Sbjct: 14  FSLIGELDRETVPELWIFLKNW---QPQVKQIEISLQQVVRIDSAGMVLLIHLIEHAKVR 70

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
                +S   EQL +L   ++ + + +Q   +    N
Sbjct: 71  NCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107


>gi|242278524|ref|YP_002990653.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638]
 gi|242121418|gb|ACS79114.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638]
          Length = 112

 Score = 39.6 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 5/100 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GI  F+  G   S   ++  + ++  I         I+D   +  I + G  +++    
Sbjct: 11  DGIITFKLKGRLDSNTSNDFEERLLSQIQD--GESKIILDFENLEYISSAGLRVLLKAAR 68

Query: 64  KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           +     GK+ L  +  +I ++F L  F     I +   + 
Sbjct: 69  ELKGGDGKLMLCSLKDYIREVFDLSGFVSFLPIYDTMDEC 108


>gi|283836262|ref|ZP_06356003.1| putative STAS domain protein [Citrobacter youngae ATCC 29220]
 gi|291067626|gb|EFE05735.1| putative STAS domain protein [Citrobacter youngae ATCC 29220]
          Length = 97

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65
             AG      ++ + D  V A+        + +DL+ ++ +DT G  L+++ +   ++ 
Sbjct: 14 LVLAGELDQDVLNPLWDARVEAMQ-----GVSCIDLNQVSRVDTGGLALLLHLIDQGKQQ 68

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
            ++ L GV+  +  L  L +       +
Sbjct: 69 GNRVSLAGVNDKVYTLAQLYNLPDDVLPR 97


>gi|256786809|ref|ZP_05525240.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
 gi|289770699|ref|ZP_06530077.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
 gi|289700898|gb|EFD68327.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
          Length = 119

 Score = 39.6 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 32/102 (31%), Gaps = 2/102 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V    G        ++ D +     +       ++DL+ +T +D+ G  +++      
Sbjct: 15  GAVIELTGELDHHTAPDVRDTLSGLGLQ--PGQQLVLDLAGLTFLDSTGLTVLIAARNHA 72

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
                   ++   +++  +I      +     P       ++
Sbjct: 73  LATDATIALAAVPDRVSRIIRVLGLNQFFPTHPTAQDADTAW 114


>gi|146313261|ref|YP_001178335.1| STAS domain-containing protein [Enterobacter sp. 638]
 gi|145320137|gb|ABP62284.1| putative STAS domain [Enterobacter sp. 638]
          Length = 97

 Score = 39.6 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
              +G      +  + D       +       ++DL ++T +DT G  L+++ +   +K
Sbjct: 13 TLFLSGELDQDLLIPLWDS-----REFAMQGVTLIDLHSVTRVDTAGVALLVHLVAEGKK 67

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
              +KL GVS ++  L  L +       +
Sbjct: 68 QGAAVKLAGVSENVLTLAKLYNLPEDVLPR 97


>gi|254383946|ref|ZP_04999293.1| hypothetical protein SSAG_03693 [Streptomyces sp. Mg1]
 gi|194342838|gb|EDX23804.1| hypothetical protein SSAG_03693 [Streptomyces sp. Mg1]
          Length = 132

 Score = 39.6 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V   AG       +++ D +  A+  S +     VDL+A+T  D  G   ++    +
Sbjct: 28  GGAVVVLAGEVDLDRATDVRDVLFSALRSSPR---VTVDLAAVTFCDCAGLNALLRARLE 84

Query: 65  YH-------GKIKLQGVSTHIEQLFSL 84
                     + ++ G+S  + +L  L
Sbjct: 85  AMESGADGVRRFRIHGMSGQVARLLDL 111


>gi|239827602|ref|YP_002950226.1| anti-sigma-factor antagonist [Geobacillus sp. WCH70]
 gi|239807895|gb|ACS24960.1| anti-sigma-factor antagonist [Geobacillus sp. WCH70]
          Length = 116

 Score = 39.6 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           + + R +G        E+ + V   + +       + +L  +T +D+ G  +I+     
Sbjct: 12 DVLIIRLSGELDHHTAEELREKVTDTMERE-SIRHIVFNLEHLTFMDSSGLGVILGRYKQ 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          ++   G++ +  +S  +++LF +
Sbjct: 71 IKNLGGEMIVCSISPTVKRLFEM 93


>gi|297564459|ref|YP_003683432.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848908|gb|ADH70926.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 123

 Score = 39.6 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
            +    G       +++ + +  A+         I+DLSA+  +D+ G  +I+     + 
Sbjct: 15  VIVAIEGELDIATAADLQEHIQSAVEDH--GPWLILDLSALDFMDSSGLNVIINAYRTVR 72

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
           +  G + L  ++  + ++  L+    +  +  
Sbjct: 73  ELGGSLALAALNERVTKVVRLVGLHRQVPVHQ 104


>gi|154686589|ref|YP_001421750.1| hypothetical protein RBAM_021580 [Bacillus amyloliquefaciens FZB42]
 gi|63146680|emb|CAG28931.1| anti-sigma F factor antagonist [Bacillus amyloliquefaciens FZB42]
 gi|154352440|gb|ABS74519.1| SpoIIAA [Bacillus amyloliquefaciens FZB42]
          Length = 117

 Score = 39.6 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V  ++         +++L  +T +D+ G  +I+     +
Sbjct: 13  VLCIRLTGELDHHTAESLKQKVTESLEAD-GIRHIVLNLEDLTFMDSSGLGVILGRYKQI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  + +LF +       + +  + +
Sbjct: 72  KQLGGEMVVCAISPAVRRLFDMSGLFKIIRFEQSEQK 108


>gi|21222105|ref|NP_627884.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)]
 gi|5019342|emb|CAB44395.1| putative anti-sigma factor antagonist [Streptomyces coelicolor
           A3(2)]
          Length = 119

 Score = 39.6 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 33/102 (32%), Gaps = 2/102 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V    G       +++ D +     +       ++DL+ +T +D+ G  +++      
Sbjct: 15  GAVIELTGELDHHTAADVRDTLPGLGLQ--PGQQLVLDLAGLTFLDSTGLTVLIAARNHA 72

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
                   ++   +++  +I      +     P       ++
Sbjct: 73  LATDATIALAAVPDRVSRIIRVLGLNQFFPTHPTAQDADTAW 114


>gi|294813000|ref|ZP_06771643.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064]
 gi|326441453|ref|ZP_08216187.1| putative anti-sigma factor antagonist [Streptomyces clavuligerus
           ATCC 27064]
 gi|294325599|gb|EFG07242.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064]
          Length = 122

 Score = 39.6 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
           V   AG         ++  +  A+ +       ++D S +   D+ G  +++      E 
Sbjct: 26  VVTPAGELDHHTADALSTPLDAALEQ--GRSRLVIDCSRLEFCDSTGLNVLLSARLKAEA 83

Query: 65  YHGKIKLQGVSTHIEQLFSLISFT 88
             G + L G+   + ++  +    
Sbjct: 84  AGGGVHLTGLRPVVARVLEITGAE 107


>gi|320012336|gb|ADW07186.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331]
          Length = 122

 Score = 39.6 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S +G  V R  G       +     V     ++      ++D+S ++  D++G   ++  
Sbjct: 13 SPSGAVVLRLKGVLDHLTAARFRRTVEEIPLRAESP--LVLDMSRLSFCDSVGLTELLLA 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
            +         +     +L  L+  T
Sbjct: 71 HRRARTASTSVLLVGVSRELGHLLELT 97


>gi|237802024|ref|ZP_04590485.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. oryzae str. 1_6]
 gi|331024880|gb|EGI04936.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. oryzae str. 1_6]
          Length = 75

 Score = 39.6 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +       +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+   
Sbjct: 7  TSQDAARVQIEGELTIYTVTELAARI---LPQVGTAARLDVDLSQVTEMDGAGLQLLAVI 63

Query: 62 MEKYHGKIK 70
            +     +
Sbjct: 64 QREAEKTAQ 72


>gi|160944583|ref|ZP_02091811.1| hypothetical protein FAEPRAM212_02097 [Faecalibacterium
          prausnitzii M21/2]
 gi|158444365|gb|EDP21369.1| hypothetical protein FAEPRAM212_02097 [Faecalibacterium
          prausnitzii M21/2]
          Length = 107

 Score = 39.6 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 4/87 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          +         AG         +   +  A+       + I+DL  +  +D+ G  LI+  
Sbjct: 8  AAGETLYAYLAGEIDHDAAQSLRMQLDDALVSR-SPRTLIIDLGGVGFMDSSGIGLILGR 66

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85
                    ++LQ     ++++  L 
Sbjct: 67 QRCARVLGTSLRLQHAPAQLQKVLRLA 93


>gi|256393143|ref|YP_003114707.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256359369|gb|ACU72866.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 117

 Score = 39.6 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 10/80 (12%), Positives = 27/80 (33%), Gaps = 5/80 (6%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKY 65
             AG        E  + + +   K       ++DL  +   D+ G   ++       + 
Sbjct: 17 LTLAGELDFHTAPEAREALRLLTLKQ--GGYLVLDLGDVAFFDSSGVATLVHAYRLATQA 74

Query: 66 HGKIKLQGVSTHIEQLFSLI 85
             ++L  +   I ++  ++
Sbjct: 75 GATLELVRIPPKIARVLRMV 94


>gi|107099963|ref|ZP_01363881.1| hypothetical protein PaerPA_01000984 [Pseudomonas aeruginosa
          PACS2]
 gi|218893543|ref|YP_002442412.1| hypothetical protein PLES_48311 [Pseudomonas aeruginosa LESB58]
 gi|254244735|ref|ZP_04938057.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126198113|gb|EAZ62176.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218773771|emb|CAW29585.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 102

 Score = 39.6 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + E      + AG         + +     I  S Q+   +VD SA+    ++G  L++ 
Sbjct: 6  LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
          FM       K+  V    E +  +  
Sbjct: 65 FMRDARKAGKVLSVRALPEDMREIAK 90


>gi|260914436|ref|ZP_05920905.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631537|gb|EEX49719.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 119

 Score = 39.6 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMY 60
          + + I++    G      +    +     ++   I   +   DL+ +T ID+ G  L+  
Sbjct: 14 NSDNISLL-LIGELSRNTLLPFWEQRASFLSAEKIADKNVYWDLAQVTRIDSAGFALLCD 72

Query: 61 FMEKY 65
           + + 
Sbjct: 73 CIGQA 77


>gi|317488951|ref|ZP_07947481.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA]
 gi|325831058|ref|ZP_08164382.1| STAS domain protein [Eggerthella sp. HGA1]
 gi|316912025|gb|EFV33604.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA]
 gi|325486979|gb|EGC89425.1| STAS domain protein [Eggerthella sp. HGA1]
          Length = 101

 Score = 39.6 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 8/94 (8%), Positives = 37/94 (39%), Gaps = 6/94 (6%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
               V +  G+  +   +++ + +     ++      ++D + +  + + G  +++   +
Sbjct: 11  GDEAVLKLGGHLNTNTAADLEEALEPVFERTS---KVVLDFADLEYLSSAGLRVLVATQK 67

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           +     G +++   S  I ++F +        ++
Sbjct: 68  RVTAAEGALRIVNASDDIREVFDITGLIDVFDVE 101


>gi|259907022|ref|YP_002647378.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96]
 gi|224962644|emb|CAX54099.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96]
 gi|283476817|emb|CAY72655.1| Uncharacterized protein yrbB [Erwinia pyrifoliae DSM 12163]
          Length = 98

 Score = 39.6 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R  G  +   +  +       + +        +D+SA+  +D+ G  L+++  +     
Sbjct: 14 LRLIGELERETLLPLWQQREAVMERVE-----TIDVSALERVDSGGLALLVHLRQIAIDN 68

Query: 69 IKLQGVSTHIEQLFSLISF 87
           +    S   ++L SLI+ 
Sbjct: 69 GRKPRFSGVTDKLNSLITL 87


>gi|53803966|ref|YP_114399.1| STAS domain-containing protein [Methylococcus capsulatus str.
          Bath]
 gi|53757727|gb|AAU92018.1| STAS domain protein [Methylococcus capsulatus str. Bath]
          Length = 120

 Score = 39.6 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 8/77 (10%), Positives = 23/77 (29%), Gaps = 3/77 (3%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
             G             +   +      +   +DL  +   D+ G  L++ ++     + 
Sbjct: 22 SVRGELTFTTAPA---ALKETLPLFRTRNGVAIDLRGVERADSAGIALLIEWVRLARKRG 78

Query: 70 KLQGVSTHIEQLFSLIS 86
              +     Q+ +L+ 
Sbjct: 79 VSLRLENMPAQVENLVR 95


>gi|307693167|ref|ZP_07635404.1| anti-sigma-factor antagonist [Ruminococcaceae bacterium D16]
          Length = 101

 Score = 39.6 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 2  SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +E G        G        E+ +++   I+ ++   +  +DL  +T  D+ G  +++ 
Sbjct: 6  TEEGRHLTAAVTGELDHHRAKEVMEELDRQIDAALP-RTLTLDLGGLTFTDSSGIAVLLR 64

Query: 61 FMEKY---HGKIKLQGVSTHIEQLFSLISF 87
             +     G + +       +++F     
Sbjct: 65 ASRRMAQIQGTMTVVHTPQQAQRVFDTAGL 94


>gi|300724961|ref|YP_003714286.1| hypothetical protein XNC1_4185 [Xenorhabdus nematophila ATCC
          19061]
 gi|297631503|emb|CBJ92210.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC
          19061]
          Length = 107

 Score = 39.6 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E         G      +  +      A+          +D+S ++ +D+ G  L +   
Sbjct: 18 ETAGNTLFLKGTLDRDSLLPLWQQKESALEGIDN-----IDVSRLSHVDSTGLALFVRLK 72

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
           +Y    ++   S   E L +LI+ 
Sbjct: 73 GEYQQGGRILSFSGVGECLNTLIAL 97


>gi|167951067|ref|ZP_02538141.1| Anti-anti-sigma regulatory factor [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 109

 Score = 39.6 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 28/101 (27%), Gaps = 6/101 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
             G +V    G             ++  +       + +VDLS +T ID+ G   ++   
Sbjct: 8   REGFSVLYLTGEVDLSCSPNARKAILDCLQNK---RNLLVDLSEVTYIDSSGVASLVEGY 64

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
                      L  VS     +  L    H   I       
Sbjct: 65  QLSRTLELDFSLVRVSDAAMNVLRLARLDHVFPIYPSFEAH 105


>gi|111020564|ref|YP_703536.1| anti-sigma factor antagonist, RsbV [Rhodococcus jostii RHA1]
 gi|110820094|gb|ABG95378.1| anti-sigma factor antagonist, possible RsbV [Rhodococcus jostii
          RHA1]
          Length = 112

 Score = 39.6 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++ G+ V R AG         + + +   ++        +VDLSA   ID+ G   ++  
Sbjct: 9  TDEGVAVVRPAGRLNMVAAPRLRELLRDVVDGGTT--CVVVDLSATDFIDSSGLGALIAG 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
          ++          ++   EQ+ ++++ T
Sbjct: 67 LKAARQAGGDLRIAQPTEQVETVLALT 93


>gi|254388395|ref|ZP_05003630.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC
          27064]
 gi|197702117|gb|EDY47929.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC
          27064]
          Length = 125

 Score = 39.6 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
          TV    G        E+   V  A+         ++DL+ +   D+ G  +++     + 
Sbjct: 11 TVLHIRGELDLLSSPEVRRQVHAAVAA--GRRDVVLDLTDVVFCDSSGVGVLIAARRLLN 68

Query: 64 KYHGKIKLQ 72
             G+++L 
Sbjct: 69 SCGGRLRLV 77


>gi|330960754|gb|EGH61014.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. maculicola str. ES4326]
          Length = 96

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 3/86 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + +     +  G      ++E+A  +   + +   +    VDLS +TE+D  G +L+   
Sbjct: 7  TTDDPARVQIDGELTIYTVTELAARI---LPQIGSAARMEVDLSHVTEMDGAGLQLLAVI 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87
            +         ++   + +      
Sbjct: 64 QREAEKAGTALHMTGQSKAVTETFEL 89


>gi|223939413|ref|ZP_03631291.1| anti-sigma-factor antagonist [bacterium Ellin514]
 gi|223891905|gb|EEF58388.1| anti-sigma-factor antagonist [bacterium Ellin514]
          Length = 126

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60
           +       AG+  +    ++   +   ++ S++    I DL+ +  I + G  +      
Sbjct: 16  SDAVTVNLAGSLDTATAPDLERQLAPVLSGSVKD--MIFDLAQLKFISSAGLRIFAAARK 73

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
            + ++HG+     +   I+++F +I    
Sbjct: 74  TLREHHGQASFVHMQPQIQEVFEIIRSLP 102


>gi|149921651|ref|ZP_01910100.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1]
 gi|149817495|gb|EDM76965.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1]
          Length = 318

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+      G+  +     + + ++ AI  S     A++D++ +  IDT  A+ ++  + 
Sbjct: 210 DGVLALPLLGSLTTTRAQALMERLLEAIQASST-RFALIDVTGVDTIDTATADHLLRVVR 268

Query: 64  K---YHGKIKLQGVSTHIEQLFSLISFTHRK 91
                  +  + G+   + Q    +     +
Sbjct: 269 ATAMLGTQCIVTGIQPAVAQTLVTLETNLEE 299


>gi|111220402|ref|YP_711196.1| putative anti anti-sigma factor [Frankia alni ACN14a]
 gi|111147934|emb|CAJ59600.1| putative anti anti-sigma factor [Frankia alni ACN14a]
          Length = 119

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64
             V    G+     +  + + ++ A  +       +VDL+ ++ +D+ G  +I++  ++ 
Sbjct: 14  AIVVHPVGDIDYSSLDPLREALLDA--RVAGVRDIVVDLAQVSFLDSQGLAVILFAHQRQ 71

Query: 65  --YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
               G++ L+ ++    +L  + + T   ++ +
Sbjct: 72  RSAGGRLALRNLNEDAYRLLHVTNLTSVIEVDH 104


>gi|34497966|ref|NP_902181.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC
          12472]
 gi|34103821|gb|AAQ60182.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC
          12472]
          Length = 106

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 1  MSENGITVFR-FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          + ++G T      G        ++ D+++  +N     +   +DLS +TE+D  GA+L+ 
Sbjct: 5  LRQDGETTLAALDGELTIFTAEDMQDELLGLLN----HERVALDLSGLTELDGCGAQLLC 60

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            + +     K   ++     L  +
Sbjct: 61 ILLAEAARLEKTMAIAAGNPLLDEV 85


>gi|116623784|ref|YP_825940.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus
          Ellin6076]
 gi|116226946|gb|ABJ85655.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus
          Ellin6076]
          Length = 114

 Score = 39.6 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 1/85 (1%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           ITV    G       S+  + +V  ++K   S   I DL+ +  ID+ G  ++     K
Sbjct: 13 DITVVELTGRLALGRESQRIEALVEELSKKP-SRKVIFDLTGVDYIDSAGIGMVALASGK 71

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
                   +     ++  L++ T 
Sbjct: 72 LKESGGTLALVAPEGRVLQLLNLTQ 96


>gi|325922505|ref|ZP_08184268.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
 gi|325924181|ref|ZP_08185741.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
 gi|325545312|gb|EGD16606.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
 gi|325547013|gb|EGD18104.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          gardneri ATCC 19865]
          Length = 97

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/84 (10%), Positives = 30/84 (35%), Gaps = 7/84 (8%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++         +DLS +  +D+ G  ++     +   
Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLSGVQRLDSAGVAMLAELAARVRS 67

Query: 67 -GKIKLQGVSTHIEQLFSLISFTH 89
           G + + G ++ +++L +    + 
Sbjct: 68 TGTVTVVGEASGLDELRAAYRLSP 91


>gi|239927122|ref|ZP_04684075.1| anti sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
          Length = 126

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 3/105 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G TV  F G        EI   +  A          ++DL+ +   D  G  L+    
Sbjct: 17  DRGHTVLEFRGEIDIAAAEEIVPHLDAATAA--PDARIVIDLTRVEFFDCSGLRLLFRAR 74

Query: 63  EK-YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
            +   G  +L  V  H   L  L      + +       +     
Sbjct: 75  HRVLAGHGRLHLVCAHPLTLRMLRITDLARLLPPYPTLDAALAQP 119


>gi|302562314|ref|ZP_07314656.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302479932|gb|EFL43025.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 150

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G TV  F G       +EI   + MA  +       ++DL+ +   D  G  L+    
Sbjct: 41  DRGHTVLEFRGEIDIAAAAEIVPHLDMATAE--PDARVVIDLTHVEFFDLSGLRLLFRAR 98

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
            +         +         ++  T   ++   +P
Sbjct: 99  HRITAGSGRLHLVCTHPLTLRMLRITGLSRLLPPRP 134


>gi|302389827|ref|YP_003825648.1| anti-sigma-factor antagonist [Thermosediminibacter oceani DSM
          16646]
 gi|302200455|gb|ADL08025.1| anti-sigma-factor antagonist [Thermosediminibacter oceani DSM
          16646]
          Length = 107

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 9/84 (10%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
            I +    G         + + +   + K       + +   +T +D+ G  +++    
Sbjct: 5  EDILIVNLKGELDHHMAHLVKEKLEEYLAKR-AFKKILFNFKNVTFMDSSGVGMLIGRYK 63

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
           +++  GK+    +   + ++F +
Sbjct: 64 SLQRIGGKVGAVNIGQQVRRIFEI 87


>gi|156935715|ref|YP_001439631.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC
          BAA-894]
 gi|156533969|gb|ABU78795.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC
          BAA-894]
          Length = 100

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 5/48 (10%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54
             R  G      ++ + +       +SI      +DLS +  +DT G
Sbjct: 12 AQLRLNGTLDRETLTPLWEQ-----RQSITDGLQRIDLSGLERVDTAG 54


>gi|15642512|ref|NP_232145.1| anti-sigma B factor antagonist, putative [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121591416|ref|ZP_01678696.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 2740-80]
 gi|121727458|ref|ZP_01680586.1| anti-sigma B factor antagonist, putative [Vibrio cholerae V52]
 gi|147675756|ref|YP_001218014.1| putative anti-sigma B factor antagonist [Vibrio cholerae O395]
 gi|153215724|ref|ZP_01950105.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 1587]
 gi|153801110|ref|ZP_01955696.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-3]
 gi|153818016|ref|ZP_01970683.1| anti-sigma B factor antagonist, putative [Vibrio cholerae NCTC
           8457]
 gi|153822411|ref|ZP_01975078.1| anti-sigma B factor antagonist, putative [Vibrio cholerae B33]
 gi|153825811|ref|ZP_01978478.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-2]
 gi|153829786|ref|ZP_01982453.1| putative anti-sigma B factor antagonist [Vibrio cholerae 623-39]
 gi|227082635|ref|YP_002811186.1| putative anti-sigma B factor antagonist [Vibrio cholerae M66-2]
 gi|229507426|ref|ZP_04396931.1| hypothetical protein VCF_002655 [Vibrio cholerae BX 330286]
 gi|229509649|ref|ZP_04399130.1| hypothetical protein VCE_001049 [Vibrio cholerae B33]
 gi|229513442|ref|ZP_04402906.1| hypothetical protein VCB_001087 [Vibrio cholerae TMA 21]
 gi|229516774|ref|ZP_04406220.1| hypothetical protein VCC_000791 [Vibrio cholerae RC9]
 gi|229524499|ref|ZP_04413904.1| hypothetical protein VCA_002094 [Vibrio cholerae bv. albensis
           VL426]
 gi|229527549|ref|ZP_04416941.1| hypothetical protein VCG_000616 [Vibrio cholerae 12129(1)]
 gi|229606933|ref|YP_002877581.1| hypothetical protein VCD_001842 [Vibrio cholerae MJ-1236]
 gi|254291434|ref|ZP_04962226.1| anti-sigma B factor antagonist, putative [Vibrio cholerae AM-19226]
 gi|254851060|ref|ZP_05240410.1| anti-sigma B factor antagonist [Vibrio cholerae MO10]
 gi|255744506|ref|ZP_05418458.1| putative anti-sigma B factor antagonist [Vibrio cholera CIRS 101]
 gi|262154670|ref|ZP_06028796.1| putative anti-sigma B factor antagonist [Vibrio cholerae INDRE
           91/1]
 gi|262167546|ref|ZP_06035251.1| putative anti-sigma B factor antagonist [Vibrio cholerae RC27]
 gi|262191032|ref|ZP_06049241.1| putative anti-sigma B factor antagonist [Vibrio cholerae CT
           5369-93]
 gi|297581363|ref|ZP_06943286.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298500654|ref|ZP_07010458.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657099|gb|AAF95658.1| anti-sigma B factor antagonist, putative [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121546732|gb|EAX56907.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 2740-80]
 gi|121630230|gb|EAX62630.1| anti-sigma B factor antagonist, putative [Vibrio cholerae V52]
 gi|124114642|gb|EAY33462.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 1587]
 gi|124123343|gb|EAY42086.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-3]
 gi|126511451|gb|EAZ74045.1| anti-sigma B factor antagonist, putative [Vibrio cholerae NCTC
           8457]
 gi|126520054|gb|EAZ77277.1| anti-sigma B factor antagonist, putative [Vibrio cholerae B33]
 gi|146317639|gb|ABQ22178.1| putative anti-sigma B factor antagonist [Vibrio cholerae O395]
 gi|148874704|gb|EDL72839.1| putative anti-sigma B factor antagonist [Vibrio cholerae 623-39]
 gi|149740534|gb|EDM54649.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-2]
 gi|150422624|gb|EDN14579.1| anti-sigma B factor antagonist, putative [Vibrio cholerae AM-19226]
 gi|227010523|gb|ACP06735.1| putative anti-sigma B factor antagonist [Vibrio cholerae M66-2]
 gi|227014406|gb|ACP10616.1| putative anti-sigma B factor antagonist [Vibrio cholerae O395]
 gi|229335181|gb|EEO00666.1| hypothetical protein VCG_000616 [Vibrio cholerae 12129(1)]
 gi|229338080|gb|EEO03097.1| hypothetical protein VCA_002094 [Vibrio cholerae bv. albensis
           VL426]
 gi|229345837|gb|EEO10809.1| hypothetical protein VCC_000791 [Vibrio cholerae RC9]
 gi|229349319|gb|EEO14275.1| hypothetical protein VCB_001087 [Vibrio cholerae TMA 21]
 gi|229353123|gb|EEO18062.1| hypothetical protein VCE_001049 [Vibrio cholerae B33]
 gi|229354931|gb|EEO19852.1| hypothetical protein VCF_002655 [Vibrio cholerae BX 330286]
 gi|229369588|gb|ACQ60011.1| hypothetical protein VCD_001842 [Vibrio cholerae MJ-1236]
 gi|254846765|gb|EET25179.1| anti-sigma B factor antagonist [Vibrio cholerae MO10]
 gi|255738031|gb|EET93424.1| putative anti-sigma B factor antagonist [Vibrio cholera CIRS 101]
 gi|262023999|gb|EEY42695.1| putative anti-sigma B factor antagonist [Vibrio cholerae RC27]
 gi|262030510|gb|EEY49148.1| putative anti-sigma B factor antagonist [Vibrio cholerae INDRE
           91/1]
 gi|262033095|gb|EEY51624.1| putative anti-sigma B factor antagonist [Vibrio cholerae CT
           5369-93]
 gi|297534201|gb|EFH73039.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297540823|gb|EFH76880.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327485003|gb|AEA79410.1| Uncharacterized protein YrbB [Vibrio cholerae LMA3894-4]
          Length = 109

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S      F   G      + ++   +        Q     + L  +  ID+ G  L+++ 
Sbjct: 7   SAENEHQFSLIGELDRETVPKLWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHL 63

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           +E    +     +S   EQL +L   ++ + + +Q   +    N
Sbjct: 64  IEHAKVRNCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107


>gi|237809663|ref|YP_002894103.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM
          9187]
 gi|237501924|gb|ACQ94517.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM
          9187]
          Length = 86

 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           +  GN  + +++++         ++       +D+S++ +ID+ G   ++ + +     
Sbjct: 1  MKLTGNLDAVQVTQLWPGREELFRQN------ELDVSSVNKIDSAGVAFLVKWAQACQAT 54

Query: 69 IKLQGVSTHIEQLFSLISF 87
           +   V     +L  LIS 
Sbjct: 55 NQRLLVQGASPELVQLISL 73


>gi|170068768|ref|XP_001868989.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167864746|gb|EDS28129.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 606

 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 44/163 (26%), Gaps = 23/163 (14%)

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  +++++   EI +     ++       IV   G++K     + + T        
Sbjct: 318 PTRVLGFIITVVMAAEIVIGFCPSVVKAFICGGIVGAFGTIKAATSWNLVVT------EK 371

Query: 255 LISPRIWALIISLPLLTILANFSA----------IIGASIVIWKYYDIPFAVFFS-RFHS 303
                + A  I   +L  +               +IG  +    Y+     +F      +
Sbjct: 372 EFIAMLVAGAIVCAILFTVLAVICPIAMIIVCNVVIGFLLCSVFYFGFFGNMFTHPYLVT 431

Query: 304 TATLANIFTGL----IKAPFM--ACAIGIVAMKEGFAVGVHSN 340
              +++   G     IK          G   +  G      + 
Sbjct: 432 ALLISSTLVGFLLSSIKMFLFANGFLFGAAGLFYGVNAVFSAR 474


>gi|308174133|ref|YP_003920838.1| anti-anti-sigma factor [Bacillus amyloliquefaciens DSM 7]
 gi|307606997|emb|CBI43368.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328552734|gb|AEB23226.1| anti-sigma F factor antagonist [Bacillus amyloliquefaciens TA208]
 gi|328912468|gb|AEB64064.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus
           amyloliquefaciens LL3]
          Length = 117

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V  ++         +++L  ++ +D+ G  +I+     +
Sbjct: 13  VLCIRLTGELDHHTAESLKQKVTESLEAD-GIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  + +LF +       + +  + +
Sbjct: 72  KQLGGEMVVCAISPAVRRLFDMSGLFKIIRFEQSEQK 108


>gi|307544713|ref|YP_003897192.1| anti-sigma-factor antagonist [Halomonas elongata DSM 2581]
 gi|307216737|emb|CBV42007.1| anti-sigma-factor antagonist [Halomonas elongata DSM 2581]
          Length = 169

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 10/116 (8%), Positives = 37/116 (31%), Gaps = 5/116 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---- 58
           ++G+ V +  G+ +   +    D     +  +   ++ +VDL   + +D+     +    
Sbjct: 13  DSGVFVLKLCGDVRL-TLCATLDQQAQQLADTPGLEAVMVDLREASNVDSTALGFLAKVA 71

Query: 59  MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
           M    +      +   +  + ++  ++ F     +           +    +    
Sbjct: 72  MALRGRLEQAPTIVVDNPDVRRMLDVMGFASYYTLVESPITEPHELHDLTEVPADE 127


>gi|183985150|ref|YP_001853441.1| anti-anti-sigma regulatory factor [Mycobacterium marinum M]
 gi|183178476|gb|ACC43586.1| anti-anti-sigma regulatory factor [Mycobacterium marinum M]
          Length = 122

 Score = 39.2 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G+TV    G         + + +   +  S  +   ++DLS +  + ++G +++    E
Sbjct: 15 DGVTVLSIGGEIDLVTAPALEEAIGAVVADSPTA--LVIDLSGVEFLGSVGLKILAATYE 72

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
          K     +   V+        +
Sbjct: 73 KLGTAAEFGVVAQGPATRRPI 93


>gi|317055659|ref|YP_004104126.1| anti-sigma-factor antagonist [Ruminococcus albus 7]
 gi|315447928|gb|ADU21492.1| anti-sigma-factor antagonist [Ruminococcus albus 7]
          Length = 119

 Score = 39.2 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          T+ R +G         +  ++   +++   S   ++D SA+T +D+ G  LIM
Sbjct: 11 TIARLSGELDHHSARMMRTEIDRELSEKHPSR-LVLDFSAVTFMDSSGIGLIM 62


>gi|115376640|ref|ZP_01463870.1| sulfate permease [Stigmatella aurantiaca DW4/3-1]
 gi|310819450|ref|YP_003951808.1| carbonate dehydratase [Stigmatella aurantiaca DW4/3-1]
 gi|115366383|gb|EAU65388.1| sulfate permease [Stigmatella aurantiaca DW4/3-1]
 gi|309392522|gb|ADO69981.1| Carbonate dehydratase [Stigmatella aurantiaca DW4/3-1]
          Length = 773

 Score = 39.2 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G      +G       S++ D +     K  +S   ++D+SA+T +D+ GA++++  +  
Sbjct: 440 GAYRVVLSGPLTFMSSSKL-DTLRTQSAKLDRSRGVVIDMSAVTAVDSSGADMLIGLVND 498

Query: 65  Y---HGKIKLQGVSTHIEQLF 82
                 K+ LQG+    ++  
Sbjct: 499 LLNADLKVVLQGLQPEFQRAL 519


>gi|302337831|ref|YP_003803037.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293]
 gi|301635016|gb|ADK80443.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293]
          Length = 116

 Score = 39.2 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
          +   +G+        + D V   I K +     +++L  +  +D+ G   +++     ++
Sbjct: 13 IIDISGDMDLYNAHRLKDVVAKLIAKGVS--ELVINLEKVDYLDSSGVGALIHVFTQVKQ 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89
             ++++  V   +E++  L     
Sbjct: 71 RELQMRITHVHGSVEKVIRLTKLMD 95


>gi|117929182|ref|YP_873733.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B]
 gi|117649645|gb|ABK53747.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B]
          Length = 113

 Score = 39.2 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +E   TV   +G        ++ + ++  ++  +     IVD+  +  +D+ G  +++  
Sbjct: 9  TEGDRTVVSVSGEIDVYTAPKLREQLIDLVSAGVYH--IIVDMENVEFLDSTGLGVLVGG 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
          +++         +    E++  +  
Sbjct: 67 LKRVRAHDGSLRLVCTQERILKIFR 91


>gi|290962382|ref|YP_003493564.1| hypothetical protein SCAB_80771 [Streptomyces scabiei 87.22]
 gi|260651908|emb|CBG75038.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 268

 Score = 39.2 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 34/96 (35%), Gaps = 5/96 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
             +    G+ +     ++   +  ++ +S +     +DL+ +   D  G   ++   +  
Sbjct: 43  RVLVTVRGDLELGTDDQLRRGLRDSLARSAEG--IDLDLAGVGFCDCSGLNALLSIRQEA 100

Query: 64  -KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
            ++     ++ +S   +++FSL              
Sbjct: 101 MEHAKTATIRSISPAAQRVFSLTDTLSLFSPPGPPE 136


>gi|293115756|ref|ZP_06604589.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876]
 gi|292808406|gb|EFF67611.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876]
          Length = 128

 Score = 39.2 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           GI +    G+        I D++   IN   +  +   +   ++ +D+ G  L+M     
Sbjct: 21  GILIVNLGGDLDHHVTEMIRDEIDRKINGQ-KVHTITFNFRNVSFMDSAGIGLLMGRYRK 79

Query: 62  MEKYHGKIKLQGVSTHIEQLFSL 84
           +++  G+I +  +   ++++F +
Sbjct: 80  IKEIGGEIYVSNIGQGVQRIFRM 102


>gi|90580200|ref|ZP_01236007.1| hypothetical anti-sigma B factor antagonist [Vibrio angustum S14]
 gi|90438502|gb|EAS63686.1| hypothetical anti-sigma B factor antagonist [Vibrio angustum S14]
          Length = 105

 Score = 39.2 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G   +  +G  +   +          +    +S+ A++DL  ++ +D+ G  ++++  ++
Sbjct: 14 GNDQYCLSGCLERDTVPAFWRRRNEWV---PESNKALLDLGGLSRVDSAGMVMLLHLHQQ 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                   +    EQL +L+  +H + I
Sbjct: 71 LSSAGCDFTLLNVPEQLKTLLRLSHVEPI 99


>gi|325915570|ref|ZP_08177880.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          vesicatoria ATCC 35937]
 gi|325538208|gb|EGD09894.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          vesicatoria ATCC 35937]
          Length = 97

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/89 (8%), Positives = 30/89 (33%), Gaps = 7/89 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      ++      +  ++         +DL+ +  +D+ G  ++     +  G
Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLTGVQRLDSAGVAMLAELAARLRG 67

Query: 68 KI--KLQGVSTHIEQLFSLISFTHRKKIK 94
               + G ++ +++L +    +     +
Sbjct: 68 NGTAAVVGEASGLDELRAAYRLSPTLDFQ 96


>gi|302871073|ref|YP_003839709.1| anti-sigma-factor antagonist [Caldicellulosiruptor obsidiansis
          OB47]
 gi|302573932|gb|ADL41723.1| anti-sigma-factor antagonist [Caldicellulosiruptor obsidiansis
          OB47]
          Length = 102

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +SENGI V    G         + D +   I+ S  S+  I+D++ +T ID+ G  + + 
Sbjct: 9  ISENGI-VIELKGELDIFSSPTLKDKLYSLIDTS--SNDVIIDMNDVTYIDSTGLGVFVG 65

Query: 61 FMEKYHGKIK---LQGVSTHIEQLFSL 84
           ++K   K     L+ +  ++ ++F++
Sbjct: 66 ALKKSRQKGTNIVLKNLKPNVRKVFTI 92


>gi|282861220|ref|ZP_06270285.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|282563878|gb|EFB69415.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
          Length = 130

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 2/106 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           + + V   +G        E+       I +       ++D++ +   D+ G   ++  ++
Sbjct: 16  DSLAVVTVSGELDVDTAPELRTKATELIGQGCPH--VVLDMAPVEFCDSSGLNALIAIVQ 73

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
             H +     V+   +QL  L+  T    +                
Sbjct: 74  HAHERGGSLSVAAAPDQLTRLLDMTGVGDLMPVHAHVDEAVAHLGR 119


>gi|78050010|ref|YP_366185.1| hypothetical protein XCV4454 [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|78038440|emb|CAJ26185.1| conserved hypothetical protein [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
          Length = 91

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 31/89 (34%), Gaps = 7/89 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++      +  +DLS +  +D+ G  ++     +   
Sbjct: 7  TLVITGVLDRAAVTAAWPQAIAQLD-----GARTLDLSGVQRLDSAGVAMLAELAARLRQ 61

Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           G   + G ++ +++L +    +     +
Sbjct: 62 AGSGAVVGEASGLDELRAAYRLSPTLDFQ 90


>gi|148360509|ref|YP_001251716.1| hypothetical protein LPC_2450 [Legionella pneumophila str. Corby]
 gi|296106424|ref|YP_003618124.1| hypothetical protein lpa_01279 [Legionella pneumophila 2300/99
          Alcoy]
 gi|148282282|gb|ABQ56370.1| conserved hypothetical protein [Legionella pneumophila str.
          Corby]
 gi|295648325|gb|ADG24172.1| Hypothetical protein lpa_01279 [Legionella pneumophila 2300/99
          Alcoy]
          Length = 93

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70
                +  + + +  A+ +  +     +DLS +T  D+ G  LI+      ++ +    
Sbjct: 11 ELTFKSVVSVRNKLYKALMEDTRER-FCLDLSEVTHCDSAGLALIIEARKLCKQNNKVFD 69

Query: 71 LQGVSTHIEQLFSLI 85
          + G+S   + L    
Sbjct: 70 VIGISPETQSLAEFC 84


>gi|89075256|ref|ZP_01161683.1| hypothetical anti-sigma B factor antagonist [Photobacterium sp.
          SKA34]
 gi|89048937|gb|EAR54505.1| hypothetical anti-sigma B factor antagonist [Photobacterium sp.
          SKA34]
          Length = 105

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G   +  +G  +   +          +     S+  ++DL  ++ +D+ G  ++++  ++
Sbjct: 14 GNDQYSLSGCLERDTVPAFWRRRNEWV---PDSNKVLLDLGGLSRVDSAGMVMLLHLHQQ 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                   +    EQL +L+  +H + I
Sbjct: 71 LSSAGCDFTLLNVPEQLKTLLRLSHVEPI 99


>gi|120406749|ref|YP_956578.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
 gi|119959567|gb|ABM16572.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1]
          Length = 116

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 26/93 (27%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
                AG+        + + V   +          +D + +   D+ G   ++    +  
Sbjct: 14  ARVHVAGDLDYGSTGLLLETVSELLVDPSGWQDLHLDFTDLAFCDSAGLSSLVVIHRRTT 73

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
                  +     QL  ++  T   +    +P 
Sbjct: 74  AAGIRLHLDHRPAQLERILRVTGLLEFLTTRPA 106


>gi|330466666|ref|YP_004404409.1| sulfate transporter family protein [Verrucosispora maris AB-18-032]
 gi|328809637|gb|AEB43809.1| sulfate transporter family protein [Verrucosispora maris AB-18-032]
          Length = 587

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 34/82 (41%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            V R  G         ++D ++    +     + ++D SAIT+IDT GA  +    E+  
Sbjct: 460 AVVRVDGTLYFANAQRLSDQLLTMAGQRTGLAAIVLDASAITDIDTDGATALAELRERLA 519

Query: 67  GKIKLQGVSTHIEQLFSLISFT 88
           G   +  ++T    +  L+   
Sbjct: 520 GHDVVLHLATVRGPVRDLLDRA 541


>gi|289669539|ref|ZP_06490614.1| anti-sigma factor antagonist [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 139

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G   +    ++   +   +   I   + ++DLSA+  I + G   I    
Sbjct: 12  QDTRQRVILTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +      GK+ +      I ++F ++       +     +   +  + + 
Sbjct: 70  KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLEAMQR 119


>gi|315502946|ref|YP_004081833.1| hypothetical protein ML5_2158 [Micromonospora sp. L5]
 gi|315409565|gb|ADU07682.1| hypothetical protein ML5_2158 [Micromonospora sp. L5]
          Length = 275

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G +V   AG    P         +   +    +   + D + +  +D      +   
Sbjct: 182 AGDGDSVVALAGELD-PSNHRDFAAALERADPRPVAGRVVFDAAELRFVDHRSLLHLRDH 240

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91
             ++     L+  S    +L  L+  +  +
Sbjct: 241 ARRHDAVAVLRTPSRAPARLVDLLGLSEVR 270


>gi|302866536|ref|YP_003835173.1| hypothetical protein Micau_2051 [Micromonospora aurantiaca ATCC
           27029]
 gi|302569395|gb|ADL45597.1| hypothetical protein Micau_2051 [Micromonospora aurantiaca ATCC
           27029]
          Length = 275

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G +V   AG    P         +   +    +   + D + +  +D      +   
Sbjct: 182 AGDGDSVVALAGELD-PSNHRDFAAALERADPRPVAGRVVFDAAELRFVDHRSLLHLRDH 240

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91
             ++     L+  S    +L  L+  +  +
Sbjct: 241 ARRHDAVAVLRTPSRAPARLVDLLGLSEVR 270


>gi|329941332|ref|ZP_08290611.1| anti anti sigma factor [Streptomyces griseoaurantiacus M045]
 gi|329299863|gb|EGG43762.1| anti anti sigma factor [Streptomyces griseoaurantiacus M045]
          Length = 124

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 5/72 (6%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
              V R +G         +   V   + +       ++DLS +   D+ G  +++    
Sbjct: 11 GDWAVLRVSGELDLVTAPTLRGRVHDVVAE--GRHRLVLDLSGVFFCDSSGVGVLIAARR 68

Query: 61 FMEKYHGKIKLQ 72
           +    G+++L 
Sbjct: 69 LIRSCRGRLRLI 80


>gi|329916013|ref|ZP_08276326.1| anti-sigma-factor antagonist (STAS) domain protein
          [Oxalobacteraceae bacterium IMCC9480]
 gi|327544812|gb|EGF30203.1| anti-sigma-factor antagonist (STAS) domain protein
          [Oxalobacteraceae bacterium IMCC9480]
          Length = 107

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 3/84 (3%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V R  G        EI     + +    +     +DLS ++E+DT G +L+M   +  
Sbjct: 3  TRVLRIDGELTIYRADEIK---ALLLAALAEPSDLELDLSGVSELDTAGLQLLMLAKKTA 59

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
                  +  H   +  +     
Sbjct: 60 LAGSHALHLVAHSTAVTGVFELLD 83


>gi|315506296|ref|YP_004085183.1| sulfate transporter/antisigma-factor antagonist stas
          [Micromonospora sp. L5]
 gi|315412915|gb|ADU11032.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Micromonospora sp. L5]
          Length = 114

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/87 (9%), Positives = 29/87 (33%), Gaps = 2/87 (2%)

Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           G+        +  ++   +       + + D   +  +D+ G  +I++   +       
Sbjct: 14 GGDLAYATAGPLRAEIDRLLTARPT--TLVFDFGGLQFMDSTGLSVIVHAWREGQHAGTA 71

Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKP 98
            +      L +++  T    + ++ P
Sbjct: 72 IELRAVPRFLETILDLTGVTGLLDRSP 98


>gi|326442650|ref|ZP_08217384.1| putative anti-sigma factor antagonist [Streptomyces clavuligerus
          ATCC 27064]
          Length = 128

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
          TV    G        E+   V  A+         ++DL+ +   D+ G  +++     + 
Sbjct: 14 TVLHIRGELDLLSSPEVRRQVHAAVAA--GRRDVVLDLTDVVFCDSSGVGVLIAARRLLN 71

Query: 64 KYHGKIKLQ 72
             G+++L 
Sbjct: 72 SCGGRLRLV 80


>gi|260778740|ref|ZP_05887632.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC
          BAA-450]
 gi|260604904|gb|EEX31199.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC
          BAA-450]
          Length = 105

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          N I   +  GN  +         +   I          +D   +  +D+ G   ++Y  +
Sbjct: 10 NEILTLQIDGNLDADGSRYAQQHIDEIIADQ--HGEVEIDFRNVRFLDSSGVGALVYLYK 67

Query: 64 KY---HGKIKLQGVSTHIEQLFSLIS 86
          +      +++++ V+    ++ +L+ 
Sbjct: 68 RLVERERQMRIENVTGQPLEIINLLR 93


>gi|116052484|ref|YP_792797.1| hypothetical protein PA14_57830 [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|254238886|ref|ZP_04932209.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|296391162|ref|ZP_06880637.1| hypothetical protein PaerPAb_23539 [Pseudomonas aeruginosa PAb1]
 gi|313107037|ref|ZP_07793240.1| hypothetical protein PA39016_000840139 [Pseudomonas aeruginosa
          39016]
 gi|115587705|gb|ABJ13720.1| conserved hypothetical protein [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|126170817|gb|EAZ56328.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|310879742|gb|EFQ38336.1| hypothetical protein PA39016_000840139 [Pseudomonas aeruginosa
          39016]
          Length = 102

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + E      + AG         + +     I  S Q+   +VD SA+    ++G  L++ 
Sbjct: 6  LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
          FM       K+  V    + +  +  
Sbjct: 65 FMRDARKAGKVLSVRALPDDMREIAK 90


>gi|239906007|ref|YP_002952746.1| hypothetical protein DMR_13690 [Desulfovibrio magneticus RS-1]
 gi|239795871|dbj|BAH74860.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 115

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAI-NKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           G  + ++AG       +++   +   +     Q  + ++DLSA+  +D+ G   ++   
Sbjct: 10 GGALLLKYAGEITLEMTADLKRRLEAELGEGEGQVRAVVIDLSAVPFMDSSGIGFLVSCN 69

Query: 63 EKYHGKIK---LQGVSTHIEQLFSLISFT 88
           +     K   L  +S  +E+   L+   
Sbjct: 70 TRMKSSGKAFYLYQLSPAVEKTLGLVQLL 98


>gi|281358604|ref|ZP_06245083.1| anti-sigma-factor antagonist [Victivallis vadensis ATCC BAA-548]
 gi|281314952|gb|EFA98986.1| anti-sigma-factor antagonist [Victivallis vadensis ATCC BAA-548]
          Length = 110

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          SENG+TV   +G   S         +   +++     S IV +  +  + + G  + +  
Sbjct: 7  SENGVTVLTMSGRLDSATSGPAEQKISEELSR---GGSWIVLMRDLEYVSSAGLRVFLLM 63

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
           ++         ++     +  ++ 
Sbjct: 64 AKRLRAAGGKLALAEPAPGVREVLD 88


>gi|72163163|ref|YP_290820.1| anti-sigma factor antagonist [Thermobifida fusca YX]
 gi|71916895|gb|AAZ56797.1| anti-sigma factor antagonist [Thermobifida fusca YX]
          Length = 122

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 2/112 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           EN   +    G+       ++   V  A++        I+D SA+  +D+ G   I++  
Sbjct: 11  ENRSVIVSVEGDLDIATAGDLRSAVQSAVDAH--GPWLILDFSALDFMDSSGLNAIIHAY 68

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
                +     ++   E++  +I      +        +    + + L    
Sbjct: 69  HLVRERGGSLALAAPNERVTKVIRLVGLHRQLPVHRTVAEAVAAMRALVVKQ 120


>gi|330809064|ref|YP_004353526.1| hypothetical protein PSEBR_a2246 [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327377172|gb|AEA68522.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
          Length = 105

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
            +    G       +E  D ++        +    +DL  + E+DT G +L++   ++
Sbjct: 9  RRILVLEGPLTIYTAAERKDLLLELF---PLAQEVEMDLGGVDEMDTAGLQLLVLIKQE 64


>gi|326777447|ref|ZP_08236712.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1]
 gi|326657780|gb|EGE42626.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1]
          Length = 124

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          +   TV R +G         +   V  A+ +       ++DLS +   D+ G  +++   
Sbjct: 10 QGSWTVLRMSGELDLVTSPVVRQSVHEAVAE--GQHDVVLDLSEVFFCDSSGVGVLIASR 67

Query: 60 YFMEKYHGKIKLQ 72
            M+   G+++L 
Sbjct: 68 RLMKSCGGRLRLV 80


>gi|302867298|ref|YP_003835935.1| sulfate transporter/antisigma-factor antagonist STAS
          [Micromonospora aurantiaca ATCC 27029]
 gi|302570157|gb|ADL46359.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Micromonospora aurantiaca ATCC 27029]
          Length = 114

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/87 (9%), Positives = 30/87 (34%), Gaps = 2/87 (2%)

Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           G+        +  ++   +       + + D   +  +D+ G  +I++   +       
Sbjct: 14 GGDLAYATAGPLRAEIDRLLTARPT--TLVFDFGGLQFMDSTGLSVIVHAWREGQHAGTA 71

Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKP 98
            + +    L +++  T    + ++ P
Sbjct: 72 IELRSVPRFLETILDLTGVTGLLDRSP 98


>gi|255600593|ref|XP_002537488.1| conserved hypothetical protein [Ricinus communis]
 gi|223516151|gb|EEF24895.1| conserved hypothetical protein [Ricinus communis]
          Length = 385

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               +G        ++       I  +  +    +DLS +    + G  L++ ++     
Sbjct: 227 TLSVSGVLDFETTVQLLAQGREWIESAAPA-QFTIDLSRVEYSSSAGLALLLEWLRIAEV 285

Query: 68  KIKLQGVSTHIEQLFSLIS 86
           K K   ++     + +L+ 
Sbjct: 286 KQKQVALTGMPAHMQALVR 304


>gi|242241044|ref|YP_002989225.1| anti-sigma B factor antagonist [Dickeya dadantii Ech703]
 gi|242133101|gb|ACS87403.1| putative anti-sigma B factor antagonist [Dickeya dadantii Ech703]
          Length = 100

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ENG  V +  G+     +  +       +N   +     +DLS +  +D+ G  L+++F 
Sbjct: 10 ENG--VLQLEGDLDRDTLLPLWQQREALLNGVGE-----LDLSRLRRVDSSGLALLLHFH 62

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87
           +   + K   ++   ++L +LI  
Sbjct: 63 HQQQQQEKELNITGASDRLSTLIQL 87


>gi|183220971|ref|YP_001838967.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189911066|ref|YP_001962621.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167775742|gb|ABZ94043.1| Anti-Sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167779393|gb|ABZ97691.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 123

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 26/54 (48%)

Query: 35 IQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT 88
           +     +DL+ I  ID+ G + +++  ++ H K ++  ++ H   +  ++   
Sbjct: 40 PKGKRTKLDLNGIERIDSAGIQFLIFIKKRSHSKHQVLELTNHSLPVLKVLDLL 93


>gi|205373762|ref|ZP_03226564.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
           [Bacillus coahuilensis m4-4]
          Length = 121

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           + V R  G        E+ +     I +  Q    +++L  ++ +D+ G  +I+     +
Sbjct: 16  VMVIRLQGELDHHAAEELREKASNMI-QDYQVKHIVLNLKQLSFMDSSGLGVILGRYKEI 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108
           ++++G++ +  VS  ++++F L        ++  + +      +F 
Sbjct: 75  KQHNGEMVVCEVSPAVKRIFELSGLFKIVHLEATEEEALNRLGAFV 120


>gi|254382337|ref|ZP_04997697.1| anti-sigma factor antagonist [Streptomyces sp. Mg1]
 gi|194341242|gb|EDX22208.1| anti-sigma factor antagonist [Streptomyces sp. Mg1]
          Length = 107

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                    G       ++    +  A++        ++DL+ +   D  G  +IM   
Sbjct: 4  RGDHAELAVGGRLDVRSAADARTALHSALDD--GRGDLVLDLTGLDSWDATGLGVIMGAH 61

Query: 63 EKYHGKIK---LQGVSTHIEQLFSLISFTH 89
           +     +   L+GV   +++L        
Sbjct: 62 RRAGRTGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|193222250|emb|CAL60919.2| putative N-acetylglucosaminyldiphosphoundecaprenol
           N-acetyl-beta-D-mannosaminyltransferase [Herminiimonas
           arsenicoxydans]
          Length = 358

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 6/90 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +    +   +G W+   +  + +    A  +        +D + +T ID+    L+M   
Sbjct: 254 QGSDCIIAASGAWEEGNLGALREVFASATARPFH---IRLDFTDVTYIDSACMALLMLLF 310

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTH 89
               K   +  +  V   +++L  L    +
Sbjct: 311 GHQSKIGYEFSISNVQPAVQRLLHLFCADY 340


>gi|256397550|ref|YP_003119114.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256363776|gb|ACU77273.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 113

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ENG T+ +  G        ++ + +V  +         IVD+  +  +D+ G  +++  +
Sbjct: 10 ENGRTIVKVGGEIDVYTAPKLREQLVELVGAGKYH--LIVDMEDVDFLDSTGLGVLVGGL 67

Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86
          ++         +    E++  +  
Sbjct: 68 KRVRAHDGSLRLVCTQERILKIFR 91


>gi|134093971|ref|YP_001099046.1| putative N-acetylglucosaminyldiphosphoundecaprenol
           N-acetyl-beta-D-mannosaminyltransferase [Herminiimonas
           arsenicoxydans]
          Length = 354

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 6/90 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +    +   +G W+   +  + +    A  +        +D + +T ID+    L+M   
Sbjct: 250 QGSDCIIAASGAWEEGNLGALREVFASATARPFH---IRLDFTDVTYIDSACMALLMLLF 306

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTH 89
               K   +  +  V   +++L  L    +
Sbjct: 307 GHQSKIGYEFSISNVQPAVQRLLHLFCADY 336


>gi|317969742|ref|ZP_07971132.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
           [Synechococcus sp. CB0205]
          Length = 115

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 43/107 (40%), Gaps = 3/107 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G  +F F G   +    +    +   +  + Q    ++DLS I  ID+ G   ++ F 
Sbjct: 12  QDGCLLFSFTGQLDAYSEKQFLAFINDHLTSTPQP--LVLDLSKIDFIDSSGLGALVQFA 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +  + + K+Q +     ++   +     ++  + +P  +    +   
Sbjct: 70  KHCNDQ-KIQFLVVGNARVVQTVKLVRLEEFLHLQPDLNTALGAIAA 115


>gi|302865110|ref|YP_003833747.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029]
 gi|302567969|gb|ADL44171.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029]
          Length = 118

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V   AG+        + D ++  +     + + +VDL+ +  +D+ G   ++   +  
Sbjct: 14 GPVIEVAGDLDMASAPTLRDRLLEVVE--TGARTVVVDLTQVGFVDSSGLGALVLVYKNL 71

Query: 66 HGKIKLQGVSTHIEQLFSLIS 86
            +    G++   + + ++ S
Sbjct: 72 RERDGWLGLAVVRQSIRNVFS 92


>gi|320012669|gb|ADW07519.1| anti-sigma-factor antagonist [Streptomyces flavogriseus ATCC 33331]
          Length = 130

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 5/117 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMY 60
           + I V    G         +    +  I +       ++D++ +   D+ G      I+ 
Sbjct: 16  DSIAVLTVEGEIDVDSAPALRTRALELIRR--GRPHVVLDMAPVRFCDSSGLNTMIGILR 73

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           + +  HG + L G   H+ +L  +        +     +               G +
Sbjct: 74  YAKDRHGSLSLVGAPPHLRRLLDVTGVGELMPVLPTVAEALTHIVGAGEAPEGQGAR 130


>gi|89099503|ref|ZP_01172379.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL
           B-14911]
 gi|89085889|gb|EAR65014.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL
           B-14911]
          Length = 110

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 1   MSENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
           + EN   V  + +G   +    ++ + +     K  ++   +VDLS ++ +D+ G  + +
Sbjct: 7   LKENDTLVQAKISGEIDAYTAPKLRESLFPLSEK--EAVEMVVDLSEVSYMDSTGLGVFV 64

Query: 60  YFMEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
              +      GK ++ G+S  +++LF +        I +Q
Sbjct: 65  GVFKNVRSNNGKFQIVGLSERLKRLFEITGLADIIDINSQ 104


>gi|331694199|ref|YP_004330438.1| sulfate transporter/antisigma-factor antagonist STAS
           [Pseudonocardia dioxanivorans CB1190]
 gi|326948888|gb|AEA22585.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Pseudonocardia dioxanivorans CB1190]
          Length = 139

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 5/125 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQS---DSAIVDLSAITEIDTIGAELIMYFM 62
             + R AG       S +   V   +  + +     + I+DL+ I   DT G E +    
Sbjct: 17  GHIVRAAGELSGRTGSRLVRLVERLVEDTPRPAGPGALIIDLAQIRRFDTDGVEALHRAF 76

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122
            +         ++    +   L        + ++ P       +  +   H G+  V+ +
Sbjct: 77  GRAGSAGVSMFLTGLEGRRSLLPHDVD--GLLDRLPVLDDVELAELDNFSHTGRTGVRHL 134

Query: 123 NDSCS 127
                
Sbjct: 135 AIVGG 139


>gi|284028560|ref|YP_003378491.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836]
 gi|283807853|gb|ADB29692.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836]
          Length = 109

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 2/99 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G TV    G        ++ + +V  ++        +VDL  +  +D+ G  +++  +
Sbjct: 10  EGGRTVVEVGGEIDVYTAPKLRETIVSLVDA--GHYDLVVDLERVEFLDSTGLGVLVGGL 67

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
           ++         +    E+L  +   T   K+    P  +
Sbjct: 68  KRVRTHDGSLSLVCTQERLLKIFRITGLTKVFEIHPDVA 106


>gi|170037443|ref|XP_001846567.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167880675|gb|EDS44058.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 575

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 51/158 (32%), Gaps = 13/158 (8%)

Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254
                  +++++   EI +     ++       IV   G++K     + + T   +F+ +
Sbjct: 287 PTRVLGFIITVVMAAEIVIGFCPSVVKAFICGGIVGVFGTIKAATSWNLVVTEK-EFIAM 345

Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS------TATLA 308
           L++  I   I+   L  I      I+   ++ +    + +  FF    +         ++
Sbjct: 346 LVAGAIVCAILFTVLAVICPIAMIIVCNVVIGFLLCSVFYFGFFGNMFTHPYLVTALLIS 405

Query: 309 NIFTGL----IKAPFM--ACAIGIVAMKEGFAVGVHSN 340
           +   G     IK          G   +  G      + 
Sbjct: 406 STLVGFLLSSIKMFLFANGFLFGAAGLFYGVNAVFSAR 443


>gi|260435714|ref|ZP_05789684.1| anti-anti-sigma regulatory factor, spoiiaa [Synechococcus sp. WH
          8109]
 gi|260413588|gb|EEX06884.1| anti-anti-sigma regulatory factor, spoiiaa [Synechococcus sp. WH
          8109]
          Length = 131

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSA--IVDLSAITEIDTIGAELIMYF 61
          +G  VF F G   +          +  +   ++++    ++DLS I  +D+ G   ++  
Sbjct: 29 DGCLVFHFTGQLDAYS----EKQFMEYVGDVLKANKLPSVLDLSKIDFLDSSGLGALVQL 84

Query: 62 MEKYHGKIK 70
           ++     +
Sbjct: 85 AKQCTDAKR 93


>gi|4336802|gb|AAD17961.1| toluene tolerance protein Ttg2E [Pseudomonas putida]
          Length = 100

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 6/91 (6%)

Query: 1  MSENGIT-----VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55
          MSE G++     V R AG         +      A+  + +    ++D SA+    ++G 
Sbjct: 1  MSEAGVSMAEPGVLRLAGVLDYRS-GPVLRKQGKALIAACREAQLVLDCSAVQRSTSVGL 59

Query: 56 ELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS 86
           L++ FM       K   V +  + +  +  
Sbjct: 60 SLLLAFMRDAQAAGKGCQVRSMPDDMREIAE 90


>gi|284008695|emb|CBA75358.1| anti-sigma factor antagonist [Arsenophonus nasoniae]
          Length = 91

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 7/86 (8%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +         G      +          +         ++++S ++ ID+ G  + +   
Sbjct: 5  QQNGQTLILTGELDRDTLPAFWQQRQQLLK-----GINVINVSQLSHIDSTGLAMFVRLK 59

Query: 63 --EKYHGKIKLQGVSTHIEQLFSLIS 86
            ++   K  L+G+S   + L  L  
Sbjct: 60 SEQQSGNKWVLEGISERFKTLIRLYK 85


>gi|315501610|ref|YP_004080497.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
 gi|315408229|gb|ADU06346.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
          Length = 117

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
            TV   AG+       ++ D +         +   +VDL+ +  +D+ G   ++     +
Sbjct: 14  GTVIEVAGDLDMSTTPQLRDRLYELTEA--GARVVVVDLAGVGFMDSSGLGALVVGYKSL 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
            +  G + L GV   + ++FS+ S      +
Sbjct: 72  RERDGWLGLAGVRASVRRVFSITSVDRVIPL 102


>gi|284988739|ref|YP_003407293.1| multi-sensor signal transduction histidine kinase [Geodermatophilus
            obscurus DSM 43160]
 gi|284061984|gb|ADB72922.1| multi-sensor signal transduction histidine kinase [Geodermatophilus
            obscurus DSM 43160]
          Length = 1711

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/102 (8%), Positives = 29/102 (28%), Gaps = 3/102 (2%)

Query: 3    ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
            E G       G         +   ++  + +      A +DL     + + G  L++   
Sbjct: 1610 EPGGPRLEVHGEVDLATAGRVRRQLLTRLEQLAPGSVATLDLGPTGYLASAGVGLVLEAV 1669

Query: 62   --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
                +   ++++Q            ++      ++      +
Sbjct: 1670 ARARRAGVELRVQTRPGTPPARILALAGVGEPAVEAPTAPLA 1711


>gi|149909631|ref|ZP_01898284.1| possible anti-sigma factor antagonist [Moritella sp. PE36]
 gi|149807335|gb|EDM67288.1| possible anti-sigma factor antagonist [Moritella sp. PE36]
          Length = 111

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          NGI + + A +  +  +  +   +   +++   +++ I+D + +T ID+ G   I++  +
Sbjct: 8  NGIIILKIATDLDTENVVSLQPRLEALVDEH--AENIILDFTNVTFIDSTGIGAIVFLFK 65

Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
          +       + L  VS    +L +++   +    
Sbjct: 66 RLTSQRRTLSLLKVSGQPYKLMTMLRVENAIPF 98


>gi|149181666|ref|ZP_01860159.1| anti-sigma F factor antagonist [Bacillus sp. SG-1]
 gi|148850644|gb|EDL64801.1| anti-sigma F factor antagonist [Bacillus sp. SG-1]
          Length = 116

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 42/98 (42%), Gaps = 4/98 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           + +   R +G        ++       I +       +++L A+  +D+ G  +I+    
Sbjct: 11  SDVLCIRLSGELDHHTAEQLRQQASQLIEEY-GIKHIVLNLEALGFMDSSGLGVILGRYK 69

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
            +++ HG++ +  +S  +++LF +       +++  + 
Sbjct: 70  QIKQKHGEMVVCAISPAVKRLFEMSGLFKIIRLEPSEE 107


>gi|218133793|ref|ZP_03462597.1| hypothetical protein BACPEC_01682 [Bacteroides pectinophilus ATCC
          43243]
 gi|217991168|gb|EEC57174.1| hypothetical protein BACPEC_01682 [Bacteroides pectinophilus ATCC
          43243]
          Length = 123

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G  V     +     +++   +V+  + +     S I D S +T +D+ G  LIM   +K
Sbjct: 5  GSLVIGLNTDLD-HHLADEIREVIDEVVEERGIRSIIFDFSKVTFMDSSGIGLIMGRYKK 63

Query: 65 YHGKIKLQGVST 76
           H   ++  VS 
Sbjct: 64 MHRTGRIAIVSP 75


>gi|29827470|ref|NP_822104.1| hypothetical protein SAV_929 [Streptomyces avermitilis MA-4680]
 gi|29604569|dbj|BAC68639.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 1198

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 30/125 (24%), Gaps = 6/125 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+ G TV R   +  S     + D++   + +        +DL     ID   A  +   
Sbjct: 656 SQTGATVLRGRSSLVSAPSRALGDEISRFLAEED-----RLDLRGEGRIDDALASRLRRL 710

Query: 62  MEKYH-GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
                   +   G     E++                P                 + +  
Sbjct: 711 SADQGVPDLVSAGFDGLRERMLGFTDDVALTPGVPPAPTEPPDLLRAGFARLRQLRVVDA 770

Query: 121 FINDS 125
           F    
Sbjct: 771 FGRTV 775


>gi|257094987|ref|YP_003168628.1| anti-sigma-factor antagonist [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
 gi|257047511|gb|ACV36699.1| anti-sigma-factor antagonist [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
          Length = 101

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---YHGKIKLQGVS 75
           I +        +     +D   +DLS + E+DT G +L+M    +      ++ + G S
Sbjct: 16 TIYQAQAQKEQLLAALAAADHLELDLSGVAEMDTAGLQLLMLLKREVLQQGKRLTISGHS 75

Query: 76 THIEQLFSLISFT 88
            ++Q+    +  
Sbjct: 76 PAVQQILDFCNLV 88


>gi|239787369|emb|CAX83845.1| Anti-sigma factor antagonist [uncultured bacterium]
          Length = 108

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 6/90 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          + G  V    G         +   +   +         +VD+S ++ ID+ G   ++   
Sbjct: 8  DRGFLVMTLDGEADLQHTPTLRKML---LESVSGGKPVVVDMSNVSYIDSSGVASLVEAY 64

Query: 63 EKYHGKI---KLQGVSTHIEQLFSLISFTH 89
          +    K     L G+S    ++  L     
Sbjct: 65 QSARKKGFSFALAGLSPAALRVLQLARLDR 94


>gi|194016719|ref|ZP_03055332.1| anti-sigma F factor antagonist [Bacillus pumilus ATCC 7061]
 gi|194011325|gb|EDW20894.1| anti-sigma F factor antagonist [Bacillus pumilus ATCC 7061]
          Length = 147

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V   +         +++L+ +T +D+ G  +I+     +
Sbjct: 43  VLCIRLTGELDHHSAETLRQKVTNYLETE-DIRHIVLNLADLTFMDSSGLGVILGRYKEI 101

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           ++  G++ +  +S  + +LF +       +++  + 
Sbjct: 102 KQLGGEMVVCAISPAVNRLFDMSGLFKIIRMEPSEQ 137


>gi|258621334|ref|ZP_05716368.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM573]
 gi|258625024|ref|ZP_05719946.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM603]
 gi|262166025|ref|ZP_06033762.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM223]
 gi|262171114|ref|ZP_06038792.1| anti-anti-sigma regulatory factor [Vibrio mimicus MB-451]
 gi|258582692|gb|EEW07519.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM603]
 gi|258586722|gb|EEW11437.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM573]
 gi|261892190|gb|EEY38176.1| anti-anti-sigma regulatory factor [Vibrio mimicus MB-451]
 gi|262025741|gb|EEY44409.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM223]
          Length = 106

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 4/83 (4%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY- 65
             R  GN  +     +   +   I K        +D   +T +D+ G   ++Y  ++  
Sbjct: 13 VTLRIEGNLDAEGSRFLQPIIDDVIWKD-AHQEVELDFRNVTFLDSSGVGALVYLYKRLV 71

Query: 66 --HGKIKLQGVSTHIEQLFSLIS 86
              K++++  +    ++  L+ 
Sbjct: 72 ESERKMRIENATGQPLEIIKLLR 94


>gi|239943395|ref|ZP_04695332.1| putative anti-sigma factor antagonist [Streptomyces roseosporus
          NRRL 15998]
 gi|239989848|ref|ZP_04710512.1| putative anti-sigma factor antagonist [Streptomyces roseosporus
          NRRL 11379]
 gi|291446864|ref|ZP_06586254.1| anti-sigma factor antagonist [Streptomyces roseosporus NRRL
          15998]
 gi|291349811|gb|EFE76715.1| anti-sigma factor antagonist [Streptomyces roseosporus NRRL
          15998]
          Length = 124

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          +    V R +G         +   V  A+ +       ++DLS +   D+ G  +++   
Sbjct: 10 QGSWAVLRISGELDLVTSPVVRQSVHDAVAE--GRHDVVLDLSEVFFCDSSGVGVLIASR 67

Query: 60 YFMEKYHGKIKLQ 72
            M+   G+++L 
Sbjct: 68 RLMKSCGGRLRLI 80


>gi|254489687|ref|ZP_05102883.1| STAS domain, putative [Methylophaga thiooxidans DMS010]
 gi|224465096|gb|EEF81349.1| STAS domain, putative [Methylophaga thiooxydans DMS010]
          Length = 101

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 3/86 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +    +FR +G       S +  +     +         +DL+ ++  D+    L++ +M
Sbjct: 10 DKDAQLFRVSGELTLDSASAVMAETETLFD---TKSELDIDLAGVSRADSASLALLITWM 66

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
           +     K         Q+ ++   +
Sbjct: 67 RQAKQSDKTISFRNLPNQMRAIAGAS 92


>gi|119717160|ref|YP_924125.1| sulphate transporter [Nocardioides sp. JS614]
 gi|119537821|gb|ABL82438.1| sulphate transporter [Nocardioides sp. JS614]
          Length = 508

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 3/86 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+     R  G         +   +   I +    D  ++ L  I  +D  GA ++   +
Sbjct: 410 EDATLHLRPTGVLYFGSAPALERSISRLIAEHPSVDRVVLHLDRIGRLDLTGALMLRDIL 469

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLI 85
              E      +++G   H   L   +
Sbjct: 470 ADAESAGRTFEIRGARAHAAGLLVRL 495


>gi|15599648|ref|NP_253142.1| hypothetical protein PA4452 [Pseudomonas aeruginosa PAO1]
 gi|9950687|gb|AAG07840.1|AE004859_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 102

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + E      + AG         + +     I  S Q+   +VD SA+    ++G  L++ 
Sbjct: 6  LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
          F+       K+  V    + +  +  
Sbjct: 65 FIRDARKAGKVLSVRALPDDMREIAK 90


>gi|261211078|ref|ZP_05925367.1| putative anti-sigma B factor antagonist [Vibrio sp. RC341]
 gi|260839579|gb|EEX66190.1| putative anti-sigma B factor antagonist [Vibrio sp. RC341]
          Length = 109

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           F   G      + E+   +        Q     + L  +  ID+ G  L+++ +E    +
Sbjct: 14  FSLIGELDRETVPELWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHLIEHAKVR 70

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
                +S   EQL +L   ++ + + +Q   +    N
Sbjct: 71  NCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107


>gi|253991142|ref|YP_003042498.1| hypothetical protein PAU_03668 [Photorhabdus asymbiotica subsp.
          asymbiotica ATCC 43949]
 gi|253782592|emb|CAQ85756.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
          Length = 97

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 8/88 (9%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
          E         G      +  +       +          +++S +  +D+ G  L++ F 
Sbjct: 8  EKAGQTLILRGILDRDSLLPLWQQKEKLLTNIND-----INVSQLEHVDSTGLALLVRFK 62

Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISF 87
            M+K   ++   GVS  +  L  L   
Sbjct: 63 YHMQKEGVELLFSGVSERLSTLIMLYDL 90


>gi|229521582|ref|ZP_04411000.1| hypothetical protein VIF_002118 [Vibrio cholerae TM 11079-80]
 gi|229341176|gb|EEO06180.1| hypothetical protein VIF_002118 [Vibrio cholerae TM 11079-80]
          Length = 109

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
             F   G      + ++   +        Q     + L  +  ID+ G  L+++ +E   
Sbjct: 12  HQFSLIGELDRETVPKLWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHLIEHAK 68

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
            +     +S   EQL +L   ++ + + +Q   +    N
Sbjct: 69  VRNCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107


>gi|224825147|ref|ZP_03698253.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002]
 gi|224602818|gb|EEG08995.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002]
          Length = 105

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 3/97 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
                +      +     ++ A+      D   +DLSA+ EIDT G +L++    +   +
Sbjct: 12  LTLLDDMTIYNATAQKQLLLDALQA---GDGLELDLSAVAEIDTAGFQLLLLAKREARHQ 68

Query: 69  IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
            K   +  H   +  ++ F +               +
Sbjct: 69  DKPLLIVAHSPAVREVVDFFNVAADFGDPMLIPARES 105


>gi|297157174|gb|ADI06886.1| putative anti-sigma factor antagonist [Streptomyces
          bingchenggensis BCW-1]
          Length = 107

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A+         ++DL+ +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTALHTALES--GGGDLVLDLTELDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+GV   +++L        
Sbjct: 62 RKAGRAGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|302390087|ref|YP_003825908.1| anti-anti-sigma factor [Thermosediminibacter oceani DSM 16646]
 gi|302200715|gb|ADL08285.1| anti-anti-sigma factor [Thermosediminibacter oceani DSM 16646]
          Length = 103

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 8/97 (8%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63
           G+ +    G      + ++  ++              +DL  +  ID+ GA +++     
Sbjct: 10  GMAILEVEGELDFSNVDQLQQEIQRR-----PEGVVEIDLQGLRFIDSSGAGMLLNQARH 64

Query: 64  --KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                  +K+  +   I +   +I F    +     P
Sbjct: 65  FFSKGRTLKIVNIPDLIREDLEVIGFFQVMEALKANP 101


>gi|126347733|emb|CAJ89450.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens
           ATCC 23877]
          Length = 119

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V   +G         +   V  A          ++DLSA+T  D+ G  +++   +
Sbjct: 17  SGTFVLEVSGELDHHTAQLLTHAVNDA---PFDDGGVVIDLSALTYCDSTGITVLIGAYQ 73

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +         ++        + +     ++    P  +    +   
Sbjct: 74  RSQATGSPLSLAGVNPDQMRVFTVVGLDQVFTFHPTTAAAIAALGR 119


>gi|256396294|ref|YP_003117858.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256362520|gb|ACU76017.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 115

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
             V   AG+           DV    + S      ++D S IT +D++G  ++++ M++
Sbjct: 12 DRVVLTVAGDVDLAVHGRFEADVEQYWDAST---DLVIDCSRITFLDSMGLRVLVHAMQR 68

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
            G  +   ++   + +  ++     + +
Sbjct: 69 AAGNGRDIAIAAPSDPVLRVLDLAGIRSL 97


>gi|205372254|ref|ZP_03225068.1| anti-anti-sigma factor (RsbW antagonist) [Bacillus coahuilensis
          m4-4]
          Length = 111

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 35/84 (41%), Gaps = 5/84 (5%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
             +G   +    ++ +++     +        +DLS +T +D+ G  + +   +K    
Sbjct: 17 VSISGEIDAYTAPKLRENLDEIAGQEGIH--LTIDLSDVTYMDSTGLGVFVGMFKKMNAT 74

Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89
          +G +KL  +S  + +LF +     
Sbjct: 75 NGHLKLVSLSERLRRLFEITGLAD 98


>gi|217077881|ref|YP_002335599.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B]
 gi|217037736|gb|ACJ76258.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B]
          Length = 110

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          T+ +  G+  +   +++  D+   +  + +    ++DLS +  ID+ G   ++  ++   
Sbjct: 15 TIAKVTGDIDAYHSADVKKDIREKMLATEKGK-FVIDLSEVNYIDSAGLGSLVAILKDAR 73

Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89
             K   + +  + +  +   T 
Sbjct: 74 LNNKELALLSPKQSVMRVFEMTR 96


>gi|172035386|ref|YP_001801887.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142]
 gi|171696840|gb|ACB49821.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142]
          Length = 117

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           + V    G   +  I +  + +   +  +   D   VD+  +  ID+ G   I+      
Sbjct: 11  VAVLEPTGYITAANIDDFQEKLTNFVRNNPSRDYL-VDMHQVEFIDSAGLMAIVSAFRLA 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           ++ + K+ +  +S  +  +F L       +I   +      +N
Sbjct: 70  QRLNKKLSVCSLSPSVRIIFELTQLDRALEIYESRQTYEASFN 112


>gi|78046160|ref|YP_362335.1| anti-sigma factor antagonist [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034590|emb|CAJ22235.1| Anti-sigma factor antagonist [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 139

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G   +    ++   +   +   I   + ++DLSA+  I + G   I    
Sbjct: 12  QDTRQRVILTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +      GK+ +      I ++F ++       +     +   +  + + 
Sbjct: 70  KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119


>gi|148554411|ref|YP_001261993.1| anti-sigma-factor antagonist [Sphingomonas wittichii RW1]
 gi|148499601|gb|ABQ67855.1| anti-sigma-factor antagonist [Sphingomonas wittichii RW1]
          Length = 134

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
           S +G  V   AG   S    E+   +   +       + +VDLS +  + + G  +++  
Sbjct: 31  SRDGTLVISAAGRIDSTTAGELEAVLPARVR---DHGAVVVDLSGVPYVSSAGLRVLLIG 87

Query: 60  -YFMEKYHGKIKLQGVSTHIEQLFSL 84
               +    ++ + GV+  + ++F +
Sbjct: 88  AKGAKAAGHRLVITGVAPAVREVFDI 113


>gi|330446815|ref|ZP_08310466.1| NTP-binding protein [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
 gi|328491006|dbj|GAA04963.1| NTP-binding protein [Photobacterium leiognathi subsp.
          mandapamensis svers.1.1.]
          Length = 105

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G   +  +G  +   +       +        S+   +DL  ++ +D+ G  ++++  ++
Sbjct: 14 GNDQYCLSGCLERDTVPAFW---LRRKEWMPDSNKVSLDLGGLSRVDSAGMVMLLHLHQQ 70

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                   +    EQL +L+  +H + I
Sbjct: 71 LSSAGCDFTLLNVPEQLKTLLRLSHVEPI 99


>gi|308067317|ref|YP_003868922.1| hypothetical protein PPE_00530 [Paenibacillus polymyxa E681]
 gi|305856596|gb|ADM68384.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 132

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++GI +FR  G   +     +     +   + I++   + DL  +  ID+ G  +++ F 
Sbjct: 18  QDGIQIFRLTG---TVGYGNVQQAKTVLREQQIKARYYVFDLLELAWIDSTGLGMLISFA 74

Query: 63  EKYH--GKIKLQGVSTHIEQLFSLISF 87
           ++           V   + +L  +   
Sbjct: 75  KEVRTDRPNVAIVVGGELRELLEMAKL 101


>gi|296166400|ref|ZP_06848833.1| anti-sigma-factor antagonist [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295898245|gb|EFG77818.1| anti-sigma-factor antagonist [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 106

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
          ++G  +   AG      I      +  A  ++       VDLS +  +D+     +
Sbjct: 14 DDGELMLVAAGEIDLSNIDHFVQALTSASGEATGGGPLTVDLSEVEYLDSAAINAL 69


>gi|254381530|ref|ZP_04996894.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340439|gb|EDX21405.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 146

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/108 (10%), Positives = 31/108 (28%), Gaps = 3/108 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E G       G             V   +       S  +D   +  ID++G  +++  
Sbjct: 9   TEEGALHLEVHGFLDFDSSEGFLTAVTGHLTDIPGLRSLHLDCGDLAGIDSMGLAMLLML 68

Query: 62  MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
             +    H  + L+     ++++ ++         ++           
Sbjct: 69  HRRTTAAHVTLLLEARPPALDRMLTITGAMDHLVPRSSGETGGHAEPP 116


>gi|168703771|ref|ZP_02736048.1| hypothetical protein GobsU_29828 [Gemmata obscuriglobus UQM 2246]
          Length = 104

 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 25/92 (27%), Gaps = 6/92 (6%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G      AG     +   +       + +     +  V    +  +DT   ++++    +
Sbjct: 16  GWARLVLAGRVTVTDAHPLHAAAREILAR---GANVAVRCEGVEHLDTAAIQVLLSLSRE 72

Query: 65  YHGKIKLQ---GVSTHIEQLFSLISFTHRKKI 93
                +     GV   I +   L     +   
Sbjct: 73  VRRAGRQLVVGGVPGPIAEYLRLAGLAGQPAA 104


>gi|330465248|ref|YP_004402991.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032]
 gi|328808219|gb|AEB42391.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032]
          Length = 113

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 2/95 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
              TV    G         + + ++  I+    +   +VDL  +  +D+ G  +++  ++
Sbjct: 11  GEHTVLEVGGEVDVYTAPRLRERLLELIDS--GARHVVVDLGRVDFLDSTGLGVLVGALK 68

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +         +    E L  +   T   ++    P
Sbjct: 69  RLRTADGTFSLVCDKEPLLKIFRITALDQVFPLHP 103


>gi|307544523|ref|YP_003897002.1| anti-sigma-factor antagonist (STAS) domain protein [Halomonas
          elongata DSM 2581]
 gi|307216547|emb|CBV41817.1| anti-sigma-factor antagonist (STAS) domain protein [Halomonas
          elongata DSM 2581]
          Length = 114

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/82 (8%), Positives = 23/82 (28%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G+      S +A+     +    + +    D+S +  + +    +++ ++ +   
Sbjct: 18 TLTVVGSADFEGASALAEAGRRWLEGRGRGERVTFDMSGVDRVSSAAVSVLLEWLRQARR 77

Query: 68 KIKLQGVSTHIEQLFSLISFTH 89
                       L  L     
Sbjct: 78 TGLEVAEVRLSAPLARLTDVAD 99


>gi|256833625|ref|YP_003162352.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603]
 gi|256687156|gb|ACV10049.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603]
          Length = 111

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           T    +G+       +  +        S++     +D+  +  +D+ GA  ++   E  
Sbjct: 10 ATTVVISGDLDLASRDQFLEVAARL--TSLRRSLLTIDMCDVRFMDSTGAAFLISLAETG 67

Query: 66 HGKIKLQGVSTHIEQLFSLIS 86
            +  L  +    +    ++ 
Sbjct: 68 QRRGWLTVLRGSSDAHRFVLD 88


>gi|49075448|gb|AAT49473.1| PA4452 [synthetic construct]
          Length = 103

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + E      + AG         + +     I  S Q+   +VD SA+    ++G  L++ 
Sbjct: 6  LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
          F+       K+  V    + +  +  
Sbjct: 65 FIRDARKAGKVLSVRALPDDMREIAK 90


>gi|271968054|ref|YP_003342250.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270511229|gb|ACZ89507.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
           factor)-like protein [Streptosporangium roseum DSM
           43021]
          Length = 150

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 4/117 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                V R  G         + + +   I         IVDL+ +T  D++G   ++  +
Sbjct: 18  RENAAVIRVGGELGFHSAPLLREQLRR-IWDGPDRPFLIVDLTEVTFCDSVGLSELVSAL 76

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116
              E    +  L GV   + ++ ++       +I              +      G+
Sbjct: 77  QHSEATGTRFVLAGVHGPLARVLTITGLRKAFEIHPSSDDALRQAAEARPDLPADGR 133


>gi|118462796|ref|YP_879719.1| anti-anti-sigma factor [Mycobacterium avium 104]
 gi|254773441|ref|ZP_05214957.1| hypothetical protein MaviaA2_02016 [Mycobacterium avium subsp.
          avium ATCC 25291]
 gi|118164083|gb|ABK64980.1| anti-anti-sigma factor [Mycobacterium avium 104]
          Length = 113

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G++V   +G         +   +   +  S  +   ++DLSA+  + ++G +++    E
Sbjct: 6  DGVSVVSVSGEIDLVTAPALEQAIGAVVADSPPA--LVIDLSAVEFLGSVGLKILAATYE 63

Query: 64 KYHGK 68
          K   +
Sbjct: 64 KLGKE 68


>gi|293391908|ref|ZP_06636242.1| anti-sigma factor B antagonist [Aggregatibacter
          actinomycetemcomitans D7S-1]
 gi|290952442|gb|EFE02561.1| anti-sigma factor B antagonist [Aggregatibacter
          actinomycetemcomitans D7S-1]
          Length = 89

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 22 EIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +        + +  ++     DLS +  ID+ G  L+  F+ 
Sbjct: 3  PLWQQRASFLLARKTETLDVHWDLSQVNRIDSAGFALLCDFLR 45


>gi|284044887|ref|YP_003395227.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283949108|gb|ADB51852.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 114

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 32/94 (34%), Gaps = 7/94 (7%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59
                V   +G      +      +  A+ +       ++DL  ++ +D+ G  L+    
Sbjct: 17  RGETLVATPSGELDVATVP----QLAAALREHDGFARLLIDLRPLSFMDSSGLRLLVAEH 72

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
              ++   ++ L      +++L  +     R  +
Sbjct: 73  DRAQRGGYELALVRGGAEVDRLLRVTRLDERLPL 106


>gi|258652298|ref|YP_003201454.1| PAS/PAC sensor protein [Nakamurella multipartita DSM 44233]
 gi|258555523|gb|ACV78465.1| putative PAS/PAC sensor protein [Nakamurella multipartita DSM
           44233]
          Length = 666

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           G  V   +G+     +  +  +V+ A           +DL+A+T + + G +++   
Sbjct: 563 GARVITVSGSVDLASVPVLRQEVLRA--GRGGELPVTIDLTAVTHLSSAGVQMLHTL 617


>gi|150021496|ref|YP_001306850.1| anti-sigma-factor antagonist [Thermosipho melanesiensis BI429]
 gi|149794017|gb|ABR31465.1| anti-sigma-factor antagonist [Thermosipho melanesiensis BI429]
          Length = 110

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +++    + + +G+  +   ++I  ++   +  S + +  I+DLS +  ID+ G   ++ 
Sbjct: 9  INDEKYLIAKVSGDIDAYHSADIKKEIRENMISSDK-EKVIIDLSEVNYIDSAGLGSLVA 67

Query: 61 FMEKYH 66
           ++   
Sbjct: 68 ILKDAR 73


>gi|28211849|ref|NP_782793.1| anti-sigma F factor antagonist [Clostridium tetani E88]
 gi|28204291|gb|AAO36730.1| anti-sigma F factor antagonist [Clostridium tetani E88]
          Length = 116

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +   + +  G        E+   +   +++    +  I+D S +T +D+ G  +++   +
Sbjct: 14 DDKLITQITGELDHHSAEEVRSKIDDRLSRD-NINKLIMDFSGVTFMDSSGIGVVIGRFK 72

Query: 64 KY---HGKIKLQGVSTHIEQLFSL 84
          K     G + L  V+ +I+++F L
Sbjct: 73 KLSYEDGVVCLINVNENIKRVFEL 96


>gi|294624413|ref|ZP_06703103.1| anti-sigma factor antagonist [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294663975|ref|ZP_06729394.1| Anti-sigma factor antagonist [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292601283|gb|EFF45330.1| anti-sigma factor antagonist [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292606258|gb|EFF49490.1| Anti-sigma factor antagonist [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 139

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G   +    ++   +   +   I   + ++DLSA+  I + G   I    
Sbjct: 12  QDTRQRVILTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +      GK+ +      I ++F ++       +     +   +  + + 
Sbjct: 70  KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119


>gi|302521364|ref|ZP_07273706.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
 gi|302430259|gb|EFL02075.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
          Length = 122

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 30/100 (30%), Gaps = 2/100 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            V   AG         + + +   ++     D  ++D S +   D+ G  +++    +  
Sbjct: 25  VVVALAGELDHHTAELLREPLDSKLDA--GRDRIVLDCSELEFCDSTGLNVLLGARLRAE 82

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                  ++     +  +   T    +    P  +   + 
Sbjct: 83  AAGGGIHLAAMQPVVSRVFEITGADAVFQVHPTLADALSG 122


>gi|256828162|ref|YP_003156890.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM
          4028]
 gi|256577338|gb|ACU88474.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM
          4028]
          Length = 117

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           TVFR  G   +   +E+   V++ +++ +     I+D S +  I++ G  +++   ++ 
Sbjct: 11 ATVFRIKGRLDATSTTELEQKVLLRLDRGVTH--LIMDFSELEYINSAGLRILVMSYQRL 68

Query: 66 HGKIKLQ---GVSTHIEQLFSL 84
          H +       GV  +I ++F +
Sbjct: 69 HSRGGQVMVCGVRDYIAEIFEI 90


>gi|218885356|ref|YP_002434677.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str.
          'Miyazaki F']
 gi|218756310|gb|ACL07209.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str.
          'Miyazaki F']
          Length = 114

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            I V    G       +++  ++     +   SD  ++DL A++ +D+ G   ++    
Sbjct: 10 GNILVAALTGELTLANATDVRSELERLFARKGVSD-VVLDLGAVSFMDSSGLGTLVAAST 68

Query: 64 KYH 66
          K  
Sbjct: 69 KAR 71


>gi|198282481|ref|YP_002218802.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans
          ATCC 53993]
 gi|198247002|gb|ACH82595.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans
          ATCC 53993]
          Length = 105

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/84 (10%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G       G+W+   ++++   +          D   + ++ +   D+    +++ + +
Sbjct: 13 DGAGWLFLRGDWR---VAQLDKALQFFSWAKDGRDCTEISVAELDAADSATLAVLLEWTQ 69

Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87
          +  G+     +     +L  L S 
Sbjct: 70 QAAGRGVPLRIHGASPKLRELASL 93


>gi|158317920|ref|YP_001510428.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
 gi|158113325|gb|ABW15522.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
          Length = 166

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 40/94 (42%), Gaps = 5/94 (5%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
              V    G      +  + + ++ A  +       +VDL  ++ +D+ G  +I+Y  ++
Sbjct: 46  DAVVVHPVGEIDYSSLEPLREALLDA--RIAGVREIVVDLEQVSFLDSQGLAVILYAHQR 103

Query: 65  ---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
                G++ L+ ++ +  +L  + + T    + +
Sbjct: 104 QRSAGGRLILRNLNENTYRLLDVTNLTTVIDVDH 137


>gi|317152275|ref|YP_004120323.1| anti-anti-sigma factor [Desulfovibrio aespoeensis Aspo-2]
 gi|316942526|gb|ADU61577.1| anti-anti-sigma factor [Desulfovibrio aespoeensis Aspo-2]
          Length = 110

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          EN I +    GN  +     + + V+  +         + D S +  I++ G  +++   
Sbjct: 8  ENEIIILTVNGNLDAEGTQAMEEKVLALLEA--GEKCLLFDFSELDYINSSGLRILVLAY 65

Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84
          ++     G++ + GV  +I+++F +
Sbjct: 66 QRLKKSSGRVAICGVKDYIQEVFEV 90


>gi|294628014|ref|ZP_06706574.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292831347|gb|EFF89696.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 123

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 32/108 (29%), Gaps = 2/108 (1%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +  G TV   +G+        +   +      +      ++DL  +  ID  G  L+   
Sbjct: 16  TAGGTTVVTLSGDVGFATRLCLGGRLDAL--SAGPRPDLVLDLRHVPFIDCAGLGLLCRV 73

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
             +   +     + +       ++  T    +    P+ + F      
Sbjct: 74  RNRVTARGGRLRLVSDSASFRRILRRTGLAGVFLVLPEFTAFPRPPGA 121


>gi|229543945|ref|ZP_04433004.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1]
 gi|3287912|sp|P70877|SP2AA_BACCO RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage
           II sporulation protein AA
 gi|1552542|emb|CAA90872.1| SpoIIAA [Bacillus coagulans]
 gi|229325084|gb|EEN90760.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1]
          Length = 116

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
            +   R  G         +   V  AI ++      +++L  ++ +D+ G  +I+     
Sbjct: 12  DVLCIRLQGELDHHTAESLRASVTKAIEEN-GIRHLVLNLEQLSFMDSSGLGVILGRYKQ 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           +++ +G++ +  +S  +++LF L       ++   +        
Sbjct: 71  IKQKNGEMIVCAISPAVKRLFELSGLFKIIRLDESEQYALHRLG 114


>gi|23014474|ref|ZP_00054288.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of
          anti-sigma factor) [Magnetospirillum magnetotacticum
          MS-1]
          Length = 103

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 1  MSENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +S NG +   + +G++   E       V   ++    + S  VDL+ I  +D+    +++
Sbjct: 7  LSRNGNVLTIKLSGDFSFSENMAFRTVVDAVVSS--GASSVEVDLTGIGSLDSAALSMLI 64

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
             E+         +     Q+  ++    
Sbjct: 65 LLRERLAKAGGTLTLVKPPPQVDRILEVVD 94


>gi|325675198|ref|ZP_08154883.1| anti-sigma-B factor antagonist [Rhodococcus equi ATCC 33707]
 gi|325553904|gb|EGD23581.1| anti-sigma-B factor antagonist [Rhodococcus equi ATCC 33707]
          Length = 112

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++ G+ V    G         + + +   +     S   +VDL     ID+ G   ++  
Sbjct: 9  TDAGVVVISPQGRLNMTAAPILREQLRELVEA--GSTRLVVDLGRTDFIDSSGLGALISG 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
          ++          ++    Q+ +++  T
Sbjct: 67 LKTARQAGGDLRIAAPTAQIETVLELT 93


>gi|297563077|ref|YP_003682051.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847525|gb|ADH69545.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 122

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 4/103 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GITV    G        E    +  A          +VDLSA+  ID  G   ++  + 
Sbjct: 14  DGITVVELGGEIDIATAEEAFTRITAAAA----DGCVVVDLSAVEFIDASGVNALVRALR 69

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
              G      ++    QL  ++       +    P  S   ++
Sbjct: 70  FATGARHHLLLACPPRQLTRILDVLALGAVLPTHPDVSAARSA 112


>gi|183221127|ref|YP_001839123.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189911218|ref|YP_001962773.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167775894|gb|ABZ94195.1| Anti-sigma factor antagonist [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167779549|gb|ABZ97847.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 107

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          TV    G+        +  ++   I+    ++S  +D+  I  +D+ G  L+    +K  
Sbjct: 12 TVVTLEGSLDIYSAPALKKELHKIIDD--GAESVAIDMINIKLLDSSGIALLANLQKKLK 69

Query: 67 GK 68
           +
Sbjct: 70 SE 71


>gi|54022119|ref|YP_116361.1| putative anti-anti-sigma factor [Nocardia farcinica IFM 10152]
 gi|54013627|dbj|BAD54997.1| putative anti-anti-sigma factor [Nocardia farcinica IFM 10152]
          Length = 121

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          SENG  +    G        ++   +  A       +  +VD+S +  + + G   ++  
Sbjct: 16 SENGTEIVTVHGEVDMASAPQLQAALEDA---QRGGNPLVVDMSDVGFLGSAGLSALLVV 72

Query: 62 MEKYHGKIKLQGVSTHIEQ 80
           E    +      S  + +
Sbjct: 73 SEAAQPQRLRVVASDAVRR 91


>gi|157830098|pdb|1AUZ|A Chain A, Solution Structure Of Spoiiaa, A Phosphorylatable
           Component Of The System That Regulates Transcription
           Factor Sigma-F Of Bacillus Subtilis, Nmr, 24 Structures
 gi|157830475|pdb|1BUZ|A Chain A, Solution Structure Of Spoiiaa, A Phosphorylatable
           Component Of The System That Regulates Transcription
           Factor Sigma-F Of Bacillus Subtilis Nmr, Minimized
           Average Structure
          Length = 116

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V  ++ K       +++L  ++ +D+ G  +I+     +
Sbjct: 12  VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 70

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  +++LF +       + +  + Q
Sbjct: 71  KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 107


>gi|300311317|ref|YP_003775409.1| UDP-N-acetyl-d-mannosaminuronic acid transferase [Herbaspirillum
           seropedicae SmR1]
 gi|300074102|gb|ADJ63501.1| UDP-N-acetyl-d-mannosaminuronic acid transferase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 357

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/86 (11%), Positives = 26/86 (30%), Gaps = 3/86 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           + G     F+G      ++ +   +  A          ++D + +  ID+     +M   
Sbjct: 265 DGGDCELLFSGALGQANLARLRPVLAQAAQGDAP---LVLDCTRLQYIDSAALAQLMLLY 321

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFT 88
                + +   +      L   I+  
Sbjct: 322 GDCVRRGRPWAIINASASLRRQITLH 347


>gi|239928871|ref|ZP_04685824.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291437198|ref|ZP_06576588.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291340093|gb|EFE67049.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
          Length = 107

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++    +   ++DLS +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTVLHSAVDD--GAGDLVLDLSELDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+GV   +++L        
Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|238064436|ref|ZP_04609145.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149]
 gi|237886247|gb|EEP75075.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149]
          Length = 115

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 2/100 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               R AG   +    E+   +     +       +VDL+ +T  D+ G    +    + 
Sbjct: 14  GACLRLAGELDTSTAPELNAVLDRLTKR--GERHLLVDLAELTFCDSTGIAAFVRGDNQA 71

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
             +     V+    ++  ++  T   ++   +P  +   +
Sbjct: 72  AARGGWLRVTGATGRVERVLRLTGLAEVLGYQPDTAHPTS 111


>gi|260574473|ref|ZP_05842477.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2]
 gi|259023369|gb|EEW26661.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2]
          Length = 115

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 3/103 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
              + +    G+ +      I     M       +   ++DLS ++ +D+ G   ++  M
Sbjct: 8   RGDLLIVTAMGD-RIDAAGAIQFKDRMREITEAPTRRVLLDLSRVSFLDSSGLGAVVAVM 66

Query: 63  EKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103
           +      K++L G++  ++++F L        I    P R   
Sbjct: 67  KALGPDRKLELAGLTPTVQKVFRLTRMDSVFTIHPAVPDRGQP 109


>gi|318059162|ref|ZP_07977885.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actG]
 gi|318077512|ref|ZP_07984844.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actF]
          Length = 125

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R AG      +  + +++  A  +       I+DLS +   D+    L++    +   
Sbjct: 34  LVRAAGELDLDTVGALREELEEAAARYP---VVILDLSRVDFGDSSFLNLLIRV--RATT 88

Query: 68  KIKLQGVSTHIEQLFSL 84
           +++L   +  + QLF+L
Sbjct: 89  RLRLVAPTEPLRQLFAL 105


>gi|312881101|ref|ZP_07740901.1| anti-sigma-factor antagonist [Aminomonas paucivorans DSM 12260]
 gi|310784392|gb|EFQ24790.1| anti-sigma-factor antagonist [Aminomonas paucivorans DSM 12260]
          Length = 111

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 34/92 (36%), Gaps = 5/92 (5%)

Query: 10  RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---H 66
           R  G   +     + + V   ++    +    +D   +  + + G  + +  +++     
Sbjct: 17  RLQGRLDTATAPALEEQVSRWLD--GGARDLELDCRDLEYVSSAGLRVFLGAVKRLKPQG 74

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           G++ L G    + ++  L  F    ++K   P
Sbjct: 75  GRLVLVGTRGVVREVLDLAGFGALVELKEDGP 106


>gi|307153376|ref|YP_003888760.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
 gi|306983604|gb|ADN15485.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
          Length = 107

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 40/95 (42%), Gaps = 5/95 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEK 64
          V + +G   + +  +   ++   + + I  D  ++D   +T +D+ G   +   +     
Sbjct: 7  VVKPSGILDATQAPDFRQEISQLVKEKI--DIIVIDFRDVTFMDSSGLGALVLSLRTAHS 64

Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
             K+ L  ++  I+ LF L S     +I + + +
Sbjct: 65 AGSKLFLCSINEQIQMLFKLTSMDRVFEIFSSREE 99


>gi|284990742|ref|YP_003409296.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM
           43160]
 gi|284063987|gb|ADB74925.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM
           43160]
          Length = 116

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E+   V    G+   P + ++  +         + +   V ++++  ID+ G  L++ + 
Sbjct: 23  EDAGPVLHLLGDVDGPLVGQLRAE------GVDERELVAVHVASVGYIDSAGLSLLVRWA 76

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFT 88
           +      +   +     +   ++   
Sbjct: 77  QSAARDGRPAVLRHASPRFREVLDLA 102


>gi|302864949|ref|YP_003833586.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029]
 gi|315501234|ref|YP_004080121.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
 gi|302567808|gb|ADL44010.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029]
 gi|315407853|gb|ADU05970.1| anti-sigma-factor antagonist [Micromonospora sp. L5]
          Length = 116

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 2/95 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
              TV    G         + + ++  I+    +   +VDL  +  +D+ G  +++  ++
Sbjct: 11  GEHTVLEVGGEVDVYTAPRLRERLLELID--GGARHVVVDLGRVDFLDSTGLGVLVGALK 68

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +         +    E L  +   T   ++    P
Sbjct: 69  RLRSAGGSFALVCDKEPLLKIFRITALDQVFPLHP 103


>gi|117924252|ref|YP_864869.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1]
 gi|117608008|gb|ABK43463.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1]
          Length = 104

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 7/87 (8%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +  TV R  G +   ++     +V         + S I+DL+    +D+ G  +I+   E
Sbjct: 15 DSETVIRVRGRFNVQQLF----EVNNIRPSDQPNHSYIIDLTETEFLDSSGMGIILRLRE 70

Query: 64 KYHGKIK---LQGVSTHIEQLFSLISF 87
          +  G  +   ++     I +L   + F
Sbjct: 71 QVSGTKENMVIRNARPGIRRLLETVQF 97


>gi|163792954|ref|ZP_02186930.1| putative anti-sigma factor antagonist [alpha proteobacterium
          BAL199]
 gi|159181600|gb|EDP66112.1| putative anti-sigma factor antagonist [alpha proteobacterium
          BAL199]
          Length = 110

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S++G+ +    G   S   ++    +V  I         +VD SA+  + + G  + +  
Sbjct: 7  SQDGLAIVVLTGRLDSTNAADTEAKIVAQIEA--GHKRVVVDASALDYLSSAGLRVFLVV 64

Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFT 88
           ++     G + L  ++ H+ ++F +  F 
Sbjct: 65 AKRVKAAGGGLVLHSLTNHVREVFEISGFI 94


>gi|260892754|ref|YP_003238851.1| anti-sigma-factor antagonist [Ammonifex degensii KC4]
 gi|260864895|gb|ACX52001.1| anti-sigma-factor antagonist [Ammonifex degensii KC4]
          Length = 116

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
             + + R +G         +  ++  A+++   S   + DLSA++ +D+ G  +I+   
Sbjct: 7  SGDMLLARLSGEIDLKVADALRRELEGALDRYPAS-FLVFDLSAVSFLDSTGLGVILGRY 65

Query: 63 EK---YHGKIKLQGVSTHIEQLFSLISFTH 89
          ++     GK+   G    ++++  L     
Sbjct: 66 KRVAEAGGKVAFVGPLPQVKRVLELAGVLR 95


>gi|307327705|ref|ZP_07606889.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu
          4113]
 gi|306886603|gb|EFN17605.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu
          4113]
          Length = 125

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
           V + +G         +   +  A+ +       ++DLS +   D+ G  +++     M 
Sbjct: 9  VVLQVSGEMDLVTSPAVRQHIHDAVAEGRHW--LVLDLSEVRFCDSSGVGVLIAARRLMR 66

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRK 91
             G+++L  +        S +      
Sbjct: 67 SCSGRLRLI-LPPQDAAHGSHVHRVLAA 93


>gi|16079404|ref|NP_390228.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221310265|ref|ZP_03592112.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221314588|ref|ZP_03596393.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221319511|ref|ZP_03600805.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221323787|ref|ZP_03605081.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|321311823|ref|YP_004204110.1| anti-sigma F factor antagonist [Bacillus subtilis BSn5]
 gi|1174407|sp|P10727|SP2AA_BACSU RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage
           II sporulation protein AA
 gi|1303998|dbj|BAA12653.1| SpoIIAA [Bacillus subtilis]
 gi|2634782|emb|CAB14279.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|291484777|dbj|BAI85852.1| anti-anti-sigma-F factor [Bacillus subtilis subsp. natto BEST195]
 gi|320018097|gb|ADV93083.1| anti-sigma F factor antagonist [Bacillus subtilis BSn5]
          Length = 117

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V  ++ K       +++L  ++ +D+ G  +I+     +
Sbjct: 13  VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  +++LF +       + +  + Q
Sbjct: 72  KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 108


>gi|91791864|ref|YP_561515.1| SpoIIAA family protein [Shewanella denitrificans OS217]
 gi|91713866|gb|ABE53792.1| SpoIIAA family protein [Shewanella denitrificans OS217]
          Length = 98

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
              G+    ++ E+        N   Q+    +D+S IT +D+ G  L++    
Sbjct: 11 CAIQGSLGQQQVIELWPKRRKLFNSDTQA----LDVSGITYVDSAGVALLLELAR 61


>gi|325918460|ref|ZP_08180582.1| anti-anti-sigma factor [Xanthomonas vesicatoria ATCC 35937]
 gi|325535320|gb|EGD07194.1| anti-anti-sigma factor [Xanthomonas vesicatoria ATCC 35937]
          Length = 139

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G   +    ++   +   +   I   + ++DLSA+  I + G   I    
Sbjct: 12  QDTRQRVILTGRLDTHTYQDLDTALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +      GK+ +      I ++F ++       +     +   +  + + 
Sbjct: 70  KALATRQGKVLVANPQPQIRKVFDMVKAVPLSDVFASTEELDAYLGAMQR 119


>gi|302037684|ref|YP_003798006.1| putative anti-sigma factor antagonist [Candidatus Nitrospira
          defluvii]
 gi|300605748|emb|CBK42081.1| putative Anti-sigma factor antagonist [Candidatus Nitrospira
          defluvii]
          Length = 112

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + N     R  GN+   +     + +       ++    ++DLS +  +D+    L+M  
Sbjct: 7  TSNKKATLRLEGNFTYTQRKAFQEMLKTVCTDQVE--EVVIDLSQVAFLDSAALGLLMIS 64

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
            +   + +   ++     +  +I   
Sbjct: 65 HRQLEAERRKLSLAYPQPTVRQIIELA 91


>gi|294630736|ref|ZP_06709296.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292834069|gb|EFF92418.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 139

 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 4/115 (3%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + NG TV    G         I + V+  +++  +    ++DL  +T +D++G  +I+  
Sbjct: 22  TANGWTVVSVTGEVDVCSAPGIREAVLRLMDEGRRH--FVLDLCEVTFLDSMGLGMIVAI 79

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISF--THRKKIKNQKPQRSFFYNSFKNLHYHI 114
            ++         ++    ++  +            +  P  +  +    N     
Sbjct: 80  TKRLRSHGGSLTLTCADPRILKVFRIGGLRTVYTFHPSPTEATHHAPQGNGLEGW 134


>gi|297204258|ref|ZP_06921655.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197715891|gb|EDY59925.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 148

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E G TV  F G        E+   +     +       ++DLSA+   D  G  L+    
Sbjct: 39 ERGHTVLEFHGEIDIAAAVELLPFLDRVTGQ--PDARLVIDLSAVEFFDCSGLRLLYRAR 96

Query: 63 EK 64
           +
Sbjct: 97 SR 98


>gi|229189191|ref|ZP_04316215.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 10876]
 gi|228594235|gb|EEK52030.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 10876]
          Length = 112

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---EL 57
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G      
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 66

Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
          ++  ++K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAIKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|29826992|ref|NP_821626.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29604090|dbj|BAC68161.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
          MA-4680]
          Length = 122

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 5/86 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          ++  + V   +G +       +    +  I         + DLS +T  D+ G   +   
Sbjct: 12 TDAALAVIALSGEFDIAAAPAVRARALELIAN--GHPDLVADLSGVTFCDSSGLGALVGI 69

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSL 84
              +   G + L  +   + +L S+
Sbjct: 70 WRCAKDADGSLTLAAIPDRLSRLLSV 95


>gi|313904792|ref|ZP_07838165.1| anti-sigma-factor antagonist [Eubacterium cellulosolvens 6]
 gi|313470395|gb|EFR65724.1| anti-sigma-factor antagonist [Eubacterium cellulosolvens 6]
          Length = 99

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 1  MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          M ENG        G        E+   +   + +    D  I DLS +  I + G  +++
Sbjct: 6  MKENGKELTVELKGELNVGTSPELEQALKGKLEEV---DKLIFDLSGLEYISSAGLRVLL 62

Query: 60 YFMEKY--HGKIKLQGVSTHIEQLFSLISFTH 89
          +  +    +G + ++ ++  ++ +F +  F+ 
Sbjct: 63 FSHQTVSKNGTMIIRNLTDEVKDIFEVTGFSD 94


>gi|253997972|ref|YP_003050035.1| hypothetical protein Msip34_0259 [Methylovorus sp. SIP3-4]
 gi|253984651|gb|ACT49508.1| hypothetical protein Msip34_0259 [Methylovorus sp. SIP3-4]
          Length = 97

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
          +  G+   P++    + ++        +D   VDLSA++++DT    ++  ++ +   +
Sbjct: 12 QVQGDMTMPQV----NKLLAQSQALPMADRLEVDLSAVSDVDTATISVLFEWLRRAQDQ 66


>gi|116751447|ref|YP_848134.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB]
 gi|116700511|gb|ABK19699.1| anti-anti-sigma regulatory factor, SpoIIAA [Syntrophobacter
          fumaroxidans MPOB]
          Length = 110

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61
          ENGIT+    G   S    +  + +   I      +  ++DL  +  I + G  +I+   
Sbjct: 8  ENGITILVLKGRLDSNTSDQFGEKLYSLI--QAGENKLVLDLGGVDYISSAGLRVIIKSV 65

Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84
            +++  G++ L  +  +I ++F L
Sbjct: 66 KDLKRIDGQLCLCSMKDYIREIFDL 90


>gi|300113021|ref|YP_003759596.1| anti-sigma-factor antagonist [Nitrosococcus watsonii C-113]
 gi|299538958|gb|ADJ27275.1| anti-sigma-factor antagonist [Nitrosococcus watsonii C-113]
          Length = 123

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           FR  G      + E+A   +             +DL  ++  D+ G  L++ ++     
Sbjct: 12 HFRMVGELTFNTVPEVAVKGLALFK--GAGKDLRIDLREVSRTDSAGLALLIAWLRYAKK 69

Query: 68 KIKLQGVSTHIEQLFSLIS 86
          + K         Q+ +L  
Sbjct: 70 ENKNLRFLNIPAQMLALAQ 88


>gi|297561207|ref|YP_003680181.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296845655|gb|ADH67675.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 136

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G+TV    G         + D ++ A + S + D  +VD+S +   D  G   ++   + 
Sbjct: 17 GVTVVPVHGEVDLATADRVRDRLLQAAHAS-RCDCLVVDMSGLDFFDASGVSALVAVYKS 75

Query: 65 YHGKIKLQGVSTHIEQLFSLISFT 88
             + +   ++        ++   
Sbjct: 76 LTREGRHVVLAEPAPIAARVLEAL 99


>gi|229016302|ref|ZP_04173249.1| Anti-sigma factor antagonist [Bacillus cereus AH1273]
 gi|229022541|ref|ZP_04179072.1| Anti-sigma factor antagonist [Bacillus cereus AH1272]
 gi|228738761|gb|EEL89226.1| Anti-sigma factor antagonist [Bacillus cereus AH1272]
 gi|228744994|gb|EEL95049.1| Anti-sigma factor antagonist [Bacillus cereus AH1273]
          Length = 126

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---EL 57
           +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G      
Sbjct: 23  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 80

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
           ++  ++K  GK++  GVS  +++LF +   T 
Sbjct: 81  LLKAIKKNDGKLEFIGVSKRLKRLFDITGLTE 112


>gi|118619076|ref|YP_907408.1| regulator of sigma subunit, anti-anti-sigma factor RsbU
           [Mycobacterium ulcerans Agy99]
 gi|118571186|gb|ABL05937.1| regulator of sigma subunit, anti-anti-sigma factor RsbU
           [Mycobacterium ulcerans Agy99]
          Length = 677

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++E+G  V R  G+  S     +   +  A+       S  +DLSA+T + + G   ++ 
Sbjct: 577 VTESGHIVVR--GDVDSNTAPTLDRQI--AVESRSGIASLTIDLSAVTHLGSAGVSALVT 632

Query: 61  FMEKYHGKI 69
             ++   + 
Sbjct: 633 ARDRARKQG 641


>gi|146306600|ref|YP_001187065.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp]
 gi|145574801|gb|ABP84333.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp]
          Length = 108

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54
              G+    E+ +  + ++ A+  S       +DL  + E+D+ G
Sbjct: 15 LALLGSLTIYEVRQAHEALLAALTGSAAGGHWQLDLGQLEELDSAG 60


>gi|183983963|ref|YP_001852254.1| regulator of sigma subunit, anti-anti-sigma factor RsbU
           [Mycobacterium marinum M]
 gi|183177289|gb|ACC42399.1| regulator of sigma subunit, anti-anti-sigma factor RsbU
           [Mycobacterium marinum M]
          Length = 653

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++E+G  V R  G+  S     +   +  A+       S  +DLSA+T + + G   ++ 
Sbjct: 553 VTESGHIVVR--GDVDSNTAPTLDRQI--AVESRSGIASLTIDLSAVTHLGSAGVSALVT 608

Query: 61  FMEKYHGKI 69
             ++   + 
Sbjct: 609 ARDRARKQG 617


>gi|296332280|ref|ZP_06874742.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305674981|ref|YP_003866653.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296150594|gb|EFG91481.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305413225|gb|ADM38344.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 117

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V  ++ K       +++L  ++ +D+ G  +I+     +
Sbjct: 13  VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  +++LF +       + +  + Q
Sbjct: 72  KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 108


>gi|15895575|ref|NP_348924.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Clostridium
          acetobutylicum ATCC 824]
 gi|15025314|gb|AAK80264.1|AE007731_9 Anti-anti-sigma factor (antagonist of SpoIIAB) [Clostridium
          acetobutylicum ATCC 824]
 gi|325509724|gb|ADZ21360.1| Anti-anti-sigma factor (antagonist of SpoIIAB) [Clostridium
          acetobutylicum EA 2018]
          Length = 111

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          NG  V    G        EI + +   I K     + I+D S +T +D+ G  +++   +
Sbjct: 9  NGKLVVSIIGELDHHSSEEIRNKIDDHI-KFKGYKNVILDFSNVTFMDSSGIGVVIGRYK 67

Query: 64 KY---HGKIKLQGVSTHIEQLFSL 84
          K     G I + G    + ++F L
Sbjct: 68 KLNSSGGSICVVGPKESVRRIFEL 91


>gi|143613|gb|AAA22789.1| sporulation protein ORF1 (put.); putative [Bacillus subtilis]
          Length = 119

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V  ++ K       +++L  ++ +D+ G  +I+     +
Sbjct: 15  VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 73

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  +++LF +       + +  + Q
Sbjct: 74  KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 110


>gi|270159896|ref|ZP_06188552.1| STAS domain-containing protein [Legionella longbeachae D-4968]
 gi|289165350|ref|YP_003455488.1| anti-anti-sigma factor [Legionella longbeachae NSW150]
 gi|269988235|gb|EEZ94490.1| STAS domain-containing protein [Legionella longbeachae D-4968]
 gi|288858523|emb|CBJ12404.1| putative anti-anti-sigma factor [Legionella longbeachae NSW150]
          Length = 93

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70
          +     + E+   +   +    +++   +DLS++   D+ G  L++      +K +   +
Sbjct: 11 DLTFKSVVEVRAKLYQTLMDD-KTNLFTLDLSSVKHCDSAGLALLIEARKLCKKSNKAFE 69

Query: 71 LQGVSTHIEQLFSLI 85
          + G+    + L    
Sbjct: 70 VIGMPAETQALAEFC 84


>gi|326438134|gb|EGD83704.1| hypothetical protein PTSG_11459 [Salpingoeca sp. ATCC 50818]
          Length = 316

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            GI V +  G+   P +  I D +V  + +     + IVD S ++ ID  GA  +   + 
Sbjct: 179 GGIMVLQLGGSLMFPAVEHIKDMLVE-LRRESSCPAVIVDFSKVSFIDYTGAHGLQDVLR 237

Query: 64  KYHGK 68
           +   +
Sbjct: 238 ELESE 242


>gi|269796790|ref|YP_003316245.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542]
 gi|269098975|gb|ACZ23411.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542]
          Length = 123

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++       +G   +   +++        +         VD+  +T +D+ G   +    
Sbjct: 16 DDIHARVVLSGEIDADLSADLQQATE---DVREAGLPVDVDVHHVTFMDSSGVAFLARLT 72

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
              G+++L      ++ L  +
Sbjct: 73 SVTPGRVRLHNTPPTVKFLLEV 94


>gi|239981814|ref|ZP_04704338.1| putative anti-sigma factor antagonist [Streptomyces albus J1074]
 gi|291453673|ref|ZP_06593063.1| anti sigma factor [Streptomyces albus J1074]
 gi|291356622|gb|EFE83524.1| anti sigma factor [Streptomyces albus J1074]
          Length = 122

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E    V   AG         + + +  A+++       +VD S +   D+ G  +++  
Sbjct: 20  NEGSSAVVTPAGELDHHTADLLRESLEEAVSQGRA--RLVVDCSQLEFCDSTGLNVLLGA 77

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFT 88
               E   G + L  +   + ++F +    
Sbjct: 78  RLKAEAAGGGVHLAAMRPVVARVFQITGAE 107


>gi|189424799|ref|YP_001951976.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacter
          lovleyi SZ]
 gi|189421058|gb|ACD95456.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacter
          lovleyi SZ]
          Length = 118

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S+        AG       +E+       + + I S + ++D+S I EID  G +LI   
Sbjct: 12 SDGSALKISVAGRLAIDTAAELHG----LLLEEIPSTNILLDVSGIEEIDLAGMQLICSA 67

Query: 62 MEKY 65
              
Sbjct: 68 CRTA 71


>gi|224371179|ref|YP_002605343.1| RsbV [Desulfobacterium autotrophicum HRM2]
 gi|223693896|gb|ACN17179.1| RsbV [Desulfobacterium autotrophicum HRM2]
          Length = 113

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++ I VF+  G   S     + + + + ++K   S   ++D   +  I + G  +I+  M
Sbjct: 8   QDQIEVFKVKGRLDSNTSPLLEEQLNLCLDK--GSTRMVIDFEGLEYISSAGIRVILKTM 65

Query: 63  EKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           +K     GK+ L  +  +++++F +  F     ++  + +
Sbjct: 66  KKLEHTQGKLVLCTLQDYVQEVFEIAGFDTYLTLEPTREK 105


>gi|78212684|ref|YP_381463.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp.
          CC9605]
 gi|78197143|gb|ABB34908.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp.
          CC9605]
          Length = 129

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G  VF F G   +    +  + VV  +  +    SA++DLS I  +D+ G   ++   +
Sbjct: 27 DGCLVFHFTGQLDAYSEKQFMEYVVDVLKAN--KLSAVLDLSKIDFLDSSGLGALVQLAK 84

Query: 64 KYHGKIK 70
          +     +
Sbjct: 85 QCTDSKR 91


>gi|313200039|ref|YP_004038697.1| hypothetical protein MPQ_0272 [Methylovorus sp. MP688]
 gi|312439355|gb|ADQ83461.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 97

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
          +  G+   P++    + ++        +D   VDLSA++++DT    ++  ++ +   +
Sbjct: 12 QVQGDMTMPQV----NKLLAQSQALPMADRLEVDLSAVSDVDTATISVLFEWLRRAQDQ 66


>gi|300787743|ref|YP_003768034.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299797257|gb|ADJ47632.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 126

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + +G  V R  G        ++      A    +     ++DL+ +T + + G   ++  
Sbjct: 25  NRDGAVVLRVDGALDLALAPKLRRLAERA--ARLGPSLLVIDLTGVTFLASAGMAELVRA 82

Query: 62  MEKYHGKIKLQGVSTHIEQLFSL 84
                    L+ V+     L  L
Sbjct: 83  HRGPTASAPLRVVAAGRITLRPL 105


>gi|296536653|ref|ZP_06898723.1| STAS domain protein [Roseomonas cervicalis ATCC 49957]
 gi|296263020|gb|EFH09575.1| STAS domain protein [Roseomonas cervicalis ATCC 49957]
          Length = 102

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
                  AG         +    VMA  +   +   ++DL+ +  ID+ G  +++   E 
Sbjct: 10  DAASLAIAGALTFDA-HAVFRQRVMAEAERPAAQPLVLDLAGLDHIDSAGLGMLLLAREV 68

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
              + +   +     Q+  +++ +   ++   +P
Sbjct: 69  AAAQGRGIVLRGARGQVARILAVSKFHQLFTLQP 102


>gi|289662319|ref|ZP_06483900.1| hypothetical protein XcampvN_04303 [Xanthomonas campestris pv.
          vasculorum NCPPB702]
          Length = 96

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/89 (8%), Positives = 31/89 (34%), Gaps = 7/89 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++ +       +DL+ +  +D+ G  ++     +   
Sbjct: 12 TLVITGVLDRAAVTAAWPQAIAQLDSARA-----LDLAGVQRLDSAGVAMLAELAARLRQ 66

Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           G   + G ++ +++L +    +     +
Sbjct: 67 TGSGAVVGEASGLDELRAAYRLSPTLDFQ 95


>gi|239930844|ref|ZP_04687797.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291439214|ref|ZP_06578604.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672]
 gi|291342109|gb|EFE69065.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672]
          Length = 125

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V   AG         + + +   + K       ++D S +   D+ G  +++   
Sbjct: 21  EGPSAVVTPAGELDHHTADLLREPLEECLAK--GFKRLVIDCSRLEFCDSTGLNVLLGAR 78

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSL 84
              E   G + L G+   + ++F +
Sbjct: 79  LKAEAAGGGVHLVGMQPVVARVFEI 103


>gi|325927589|ref|ZP_08188821.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          perforans 91-118]
 gi|325542054|gb|EGD13564.1| putative NTP binding protein (contains STAS domain) [Xanthomonas
          perforans 91-118]
          Length = 96

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66
             AG      ++      +  ++      +  +DLS +  +D+ G  ++     +    
Sbjct: 13 LVIAGVLDRAAVTAAWPQAIAQLD-----GARTLDLSGVQRLDSAGVAMLAELAARLRQA 67

Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
          G   + G ++ +++L +    +     +
Sbjct: 68 GSGAVVGEASGLDELRAAYRLSPTLDFQ 95


>gi|196248281|ref|ZP_03146982.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16]
 gi|196212006|gb|EDY06764.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16]
          Length = 141

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/122 (9%), Positives = 40/122 (32%), Gaps = 4/122 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---Y 65
            +  G             +++A   +++    ++D+S +  +D+ G   ++ F ++    
Sbjct: 21  IKLTGRLAYDTQLAAEQKLLVA-AAAVKRRLVVIDVSGLQFLDSTGLAFLVRFFKQVVSA 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           +  + +      + +   LI+   R        Q        ++      +++       
Sbjct: 80  NRAMAMIVRDNAVLKKILLIAKLDRLLPIVADEQELLSLPPLRSPDSIGQEELYSAWQQC 139

Query: 126 CS 127
            S
Sbjct: 140 RS 141


>gi|117164608|emb|CAJ88154.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens
          ATCC 23877]
          Length = 112

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 6/83 (7%), Positives = 23/83 (27%), Gaps = 2/83 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V    G+        + + +             ++DL+ +   D+ G   ++      
Sbjct: 14 GPVLAIFGDLDYATAGRLRELLTTLTLS--PGQLLVLDLAGMEFCDSSGITALIVARNHA 71

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
                  +++  +    ++   
Sbjct: 72 RAAQADVALASVPDHTLRVLRMV 94


>gi|294631424|ref|ZP_06709984.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292834757|gb|EFF93106.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 107

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++  +     ++DLS +   D  G  +IM   
Sbjct: 4  RGDHAQVVVGGRLDVRSAADARTALHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGVH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+ V   +++L        
Sbjct: 62 RRAGRCGRRLVLRDVPPQMQRLLVATRLHR 91


>gi|42780160|ref|NP_977407.1| anti sigma b factor antagonist RsbV [Bacillus cereus ATCC 10987]
 gi|42736078|gb|AAS40015.1| anti sigma b factor antagonist RsbV [Bacillus cereus ATCC 10987]
          Length = 111

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 8  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97


>gi|89096314|ref|ZP_01169207.1| YqhA [Bacillus sp. NRRL B-14911]
 gi|89089168|gb|EAR68276.1| YqhA [Bacillus sp. NRRL B-14911]
          Length = 262

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            + + V    G+      +++ +  +    +   +   ++DLS +  IDT  A  ++  +
Sbjct: 161 SDDVAVISLVGDLDRKRTNDLMEKALQYGARRSLNC-MVIDLSGVEFIDTRIAHELLRTV 219

Query: 63  EK---YHGKIKLQGVSTHIEQ 80
           +        +KL G+   I Q
Sbjct: 220 KAIQITGMTVKLTGIRPEIAQ 240


>gi|228964057|ref|ZP_04125184.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          sotto str. T04001]
 gi|228795627|gb|EEM43107.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          sotto str. T04001]
          Length = 112

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62
              +  G   +   S++ + ++   N+       +VD   +  +D+ G  + +  +   
Sbjct: 14 GYTVQLTGEIDAYTASDLKNKIMPIANEKEVH--IVVDFHNVDYMDSTGLGVFIALLKAV 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
          +K  GK++  GVS  +++LF +   T 
Sbjct: 72 KKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|37527882|ref|NP_931227.1| hypothetical protein plu4030 [Photorhabdus luminescens subsp.
          laumondii TTO1]
 gi|36787318|emb|CAE16402.1| unnamed protein product [Photorhabdus luminescens subsp.
          laumondii TTO1]
          Length = 97

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  +       + +        +++S +  +D+ G  L++ F      
Sbjct: 13 TLILKGTLDRNSLLPLWQQKEKLLVEIND-----INVSQLEYVDSTGLALLVRFKHHMQM 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +      S   E+L +LI+ 
Sbjct: 68 RGDKLRFSGIDERLNTLITL 87


>gi|317050785|ref|YP_004111901.1| anti-anti-sigma factor [Desulfurispirillum indicum S5]
 gi|316945869|gb|ADU65345.1| anti-anti-sigma factor [Desulfurispirillum indicum S5]
          Length = 117

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 6/89 (6%)

Query: 3  ENGITVFRFAG-NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          ++GI V    G    +    E+ + +     K  Q    +VDL  +  +D+ G   ++  
Sbjct: 8  QDGIIVVCVEGERLDAHNSVELKEYLQKLQEKGPQ--RVVVDLGRVQFMDSSGIGALVAG 65

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISF 87
             +    G ++L  +++ +E +F L   
Sbjct: 66 FKGLRAAGGDLRLCCIASPVEAIFQLTRL 94


>gi|284044841|ref|YP_003395181.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
 gi|283949062|gb|ADB51806.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684]
          Length = 846

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55
           E+G T  + +G        +  D +    +   Q  + +VDL  +T ID+ G 
Sbjct: 744 EDGRTSLQLSGELDLQTTPQFRDRLA---DVEPQDGTLVVDLRRLTFIDSSGI 793


>gi|260596179|ref|YP_003208750.1| hypothetical protein CTU_03870 [Cronobacter turicensis z3032]
 gi|260215356|emb|CBA27356.1| Uncharacterized protein yrbB [Cronobacter turicensis z3032]
          Length = 100

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 5/49 (10%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54
              R  G      +  + +       +S+      +DLS +  +DT G
Sbjct: 11 GAQLRLNGTLDRETLLPLWEQ-----RQSLTDGLQRIDLSGLARVDTAG 54


>gi|254383948|ref|ZP_04999295.1| anti-sigma factor antagonist [Streptomyces sp. Mg1]
 gi|194342840|gb|EDX23806.1| anti-sigma factor antagonist [Streptomyces sp. Mg1]
          Length = 126

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 2/96 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V   AG         + + +  A+ +   ++  +VD   +   D+ G  +++    + 
Sbjct: 24  TAVVAVAGELDHDHAEPLREAISGALEQ--GAERIVVDCERLAFCDSTGLNILLRGRLEA 81

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
                   +++    +  +   T  K +    P+  
Sbjct: 82  RETGSSVELASLGPTVGRMFEITGAKAVFTVYPELP 117


>gi|119476903|ref|ZP_01617184.1| high affinity sulfate transporter [marine gamma proteobacterium
           HTCC2143]
 gi|119449710|gb|EAW30947.1| high affinity sulfate transporter [marine gamma proteobacterium
           HTCC2143]
          Length = 505

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 25/74 (33%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             +   AG         + + +V  ++K  ++   I+DL  +  ID  GA +I     + 
Sbjct: 411 TLLLEPAGVLFFGSAQGLDETLVDELSKHPEAKELILDLRGLGRIDYTGALVIHRIALEA 470

Query: 66  HGKIKLQGVSTHIE 79
                   V     
Sbjct: 471 EQAGLAVKVIPGQP 484


>gi|85858336|ref|YP_460538.1| anti-sigma F factor antagonist [Syntrophus aciditrophicus SB]
 gi|85721427|gb|ABC76370.1| anti-sigma F factor antagonist [Syntrophus aciditrophicus SB]
          Length = 194

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +EN ITV    G   +    +  D +   I K   + + +VD   +  I + G   I+  
Sbjct: 90  TENNITVVTVTGRMDALTAPDYQDKLNELIAK--GATTFVVDFEGLDYIGSAGLRGILST 147

Query: 62  MEKYHGKIKLQGVS 75
            +   GK      +
Sbjct: 148 AKALKGKGGEVHFA 161


>gi|212638843|ref|YP_002315363.1| stage II sporulation protein AA (antagonist of anti-sigma factor,
          stand-alone STAS domain) [Anoxybacillus flavithermus
          WK1]
 gi|212560323|gb|ACJ33378.1| Stage II sporulation protein AA (antagonist of anti-sigma factor,
          stand-alone STAS domain) [Anoxybacillus flavithermus
          WK1]
          Length = 118

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          + + R AG        ++  ++   + +  +  + +++L+ +T +D+ G  +I+     +
Sbjct: 15 VLLVRLAGELDHHTAEQLRAEITDVLERE-RIKAIVLNLNELTFMDSSGLGVILGRYKQI 73

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++  G++ +  VS  I++LF +
Sbjct: 74 QRMGGEMVVCSVSPSIKRLFDM 95


>gi|297204175|ref|ZP_06921572.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197714139|gb|EDY58173.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 122

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 5/86 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58
          ++  + V   +G +       +    +  I         + DLS +T  D+ G   +   
Sbjct: 12 TDGALAVIALSGEFDIAAAPAVRARALELIAN--GHPDLLADLSGVTFCDSSGLGALVGI 69

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSL 84
              +   G + L  +   + +L S+
Sbjct: 70 WRCAKDAGGSLTLAAIPDRLGRLLSV 95


>gi|29827462|ref|NP_822096.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29604561|dbj|BAC68631.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
           MA-4680]
          Length = 139

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 27/87 (31%), Gaps = 5/87 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63
             V    G+       E+   +        +    ++DL+ +   D+ G  L++      
Sbjct: 17  GPVLEITGDLDHETSPELRHAIDRLTLA--RGQLLVLDLAGLRFCDSSGITLLLAARNLA 74

Query: 64  -KYHGKIKLQGVSTHIEQLFSLISFTH 89
            +      L  V  +  ++  ++    
Sbjct: 75  IEAGVDTVLAAVPANTARVLGIVGLDQ 101


>gi|289667682|ref|ZP_06488757.1| hypothetical protein XcampmN_04032 [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 91

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/89 (8%), Positives = 31/89 (34%), Gaps = 7/89 (7%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
               G      ++      +  ++ +       +DL+ +  +D+ G  ++     +   
Sbjct: 7  TLVITGVLDRAAVTAAWPQAIAQLDSARA-----LDLAGVQRLDSAGVAMLAELAARLRQ 61

Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           G   + G ++ +++L +    +     +
Sbjct: 62 TGSGAVVGEASGLDELRAAYRLSPTLDFQ 90


>gi|253576352|ref|ZP_04853682.1| anti-sigma F factor antagonist [Paenibacillus sp. oral taxon 786
          str. D14]
 gi|251844245|gb|EES72263.1| anti-sigma F factor antagonist [Paenibacillus sp. oral taxon 786
          str. D14]
          Length = 117

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
            + R +G         +   +   I +     + ++ L  +  +D+ G  +I+     +
Sbjct: 13 TLIVRLSGELDHHTADNVRMRMDEEIAR-GNCRNLVLSLKELQFMDSSGIGVILGRYKLI 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          ++  GK+ +  V+  + +L  +
Sbjct: 72 KQKGGKMVVCDVNPPVYRLLEM 93


>gi|295836989|ref|ZP_06823922.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197697449|gb|EDY44382.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 122

 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 27/92 (29%), Gaps = 2/92 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            V   AG         + + +   ++        ++D S +   D+ G  +++    +  
Sbjct: 25  VVVALAGELDHHTAELLREPLDSKLDA--GHARIVLDCSELEFCDSTGLNVLLGARLRAE 82

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
                  ++     +  +   T    +    P
Sbjct: 83  AAGGGVHLAAMQPVVSRVFEITGADAVFQVHP 114


>gi|294501137|ref|YP_003564837.1| anti-sigma F factor antagonist [Bacillus megaterium QM B1551]
 gi|294351074|gb|ADE71403.1| anti-sigma F factor antagonist [Bacillus megaterium QM B1551]
          Length = 116

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + + R  G        E+   +  AI K   S   I++L  +T +D+ G  +I+   ++
Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70

Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84
               G++ +  +S  IE+LF++
Sbjct: 71 VHNNGGEMVVCAISPAIERLFNM 93


>gi|318056727|ref|ZP_07975450.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actG]
 gi|318075361|ref|ZP_07982693.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actF]
          Length = 122

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           V   AG         + + +   ++     D  ++D S +   D+ G  +++    +  
Sbjct: 25 VVVALAGELDHHTAELLREPLDSKLDA--GRDRIVLDCSELEFCDSTGLNVLLGARLRAE 82

Query: 67 GKIKLQGVSTHIE 79
                 ++    
Sbjct: 83 AAGGGIHLAAMQP 95


>gi|138895138|ref|YP_001125591.1| anti-sigma factor [Geobacillus thermodenitrificans NG80-2]
 gi|134266651|gb|ABO66846.1| Anti-sigma factor (antagonist of SpoIIAB) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 142

 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/122 (9%), Positives = 40/122 (32%), Gaps = 4/122 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---Y 65
            +  G             +++A   +++    ++D+S +  +D+ G   ++ F ++    
Sbjct: 22  IKLTGRLAYDTQLAAEQKLLVA-AAAVKRRLVVIDVSGLQFLDSTGLAFLVRFFKQVVSA 80

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
           +  + +      + +   LI+   R        Q        ++      +++       
Sbjct: 81  NRAMAMIVRDNAVLKKILLIAKLDRLLPIVADEQELLSLPPLRSPDSIGQEELYSAWQQC 140

Query: 126 CS 127
            S
Sbjct: 141 RS 142


>gi|295706484|ref|YP_003599559.1| anti-sigma F factor antagonist [Bacillus megaterium DSM 319]
 gi|294804143|gb|ADF41209.1| anti-sigma F factor antagonist [Bacillus megaterium DSM 319]
          Length = 116

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + + R  G        E+   +  AI K   S   I++L  +T +D+ G  +I+   ++
Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70

Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84
               G++ +  +S  +E+LF++
Sbjct: 71 VHNNGGEMVVCAISPAVERLFNM 93


>gi|229154666|ref|ZP_04282781.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 4342]
 gi|228628614|gb|EEK85326.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 4342]
          Length = 112

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|288555614|ref|YP_003427549.1| multi-sensor hybrid histidine kinase [Bacillus pseudofirmus OF4]
 gi|288546774|gb|ADC50657.1| multi-sensor hybrid histidine kinase [Bacillus pseudofirmus OF4]
          Length = 848

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 19/191 (9%)

Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI-AGRSGSA 227
            + I++S     V A      L +       +        RE   ++ AV +  G     
Sbjct: 13  GLSIILSIFIALVAAYTSIDLLEK-------VYTKKQYFTREFWAVVAAVTLGVGVWSMH 65

Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287
            ++ +G    +    AI  + L  V  ++   +  LII      + A F ++     V  
Sbjct: 66  FISMLGYNSHHHTQHAISPIILSIVFSILFSSLTLLIIMKSTSYLHAVFGSLSFGVGVSI 125

Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347
            +Y    ++          +  +  GLI    +A          GF +   S   G  VT
Sbjct: 126 LHYAGLMSMHGGEAADVFNITQVLVGLISGSILAFI--------GFRIFRTSIE-GTNVT 176

Query: 348 TC--VVQSISI 356
               VV SI +
Sbjct: 177 LSHKVVSSILL 187


>gi|302554190|ref|ZP_07306532.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM
          40736]
 gi|302471808|gb|EFL34901.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM
          40736]
          Length = 107

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++  +     ++DLS +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+GV   +++L        
Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|254820821|ref|ZP_05225822.1| hypothetical protein MintA_12883 [Mycobacterium intracellulare
          ATCC 13950]
          Length = 113

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G++V   +G         +   +   + +S  +   ++DLSA+  + ++G +++    E
Sbjct: 6  DGVSVVSVSGEIDLVTAPALEQAIGAVVAESPTA--LVIDLSAVEFLGSVGLKILAATYE 63

Query: 64 KYHGK 68
          K    
Sbjct: 64 KLGKD 68


>gi|117164500|emb|CAJ88046.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens
           ATCC 23877]
          Length = 134

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GI V    G   +    ++   + +A     +    ++D+  +T +D+ G  +++   +
Sbjct: 35  DGIRVLALTGEIDNDTGGQLRQALDVAGTDRPR---IVLDMRQVTFMDSSGINILIAAHQ 91

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFT 88
                     ++   + +  ++   
Sbjct: 92  DIAASGGWLRLAAPTDAVLRVLRLV 116


>gi|114049901|emb|CAK50918.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens]
 gi|114050123|emb|CAK51156.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens]
          Length = 139

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 5/83 (6%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V    G +    ++ +AD +  A  +       ++D S IT  D+    L++   + 
Sbjct: 46  GAWVVSARGPYDMSTVTPLADALDTAAKEHP---KVVLDASGITFADSALLNLLILTHQA 102

Query: 65  YHGKIKLQGVSTHIEQLFSLISF 87
              ++     +  +++L  L + 
Sbjct: 103 ADFRVAAP--AQQLKRLLQLTAA 123


>gi|77165087|ref|YP_343612.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus oceani ATCC 19707]
 gi|254433230|ref|ZP_05046738.1| STAS domain protein [Nitrosococcus oceani AFC27]
 gi|76883401|gb|ABA58082.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus oceani ATCC 19707]
 gi|207089563|gb|EDZ66834.1| STAS domain protein [Nitrosococcus oceani AFC27]
          Length = 170

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G+ V R  G+ + P +S   D  +  +   +     +VDL+    ID+    L++   +
Sbjct: 12 DGVHVLRLLGDMRYP-LSPSLDHFLQRLFSEVTPQGFVVDLTDTRSIDSTNLGLLVRIAK 70

Query: 64 KYHGKIKLQ 72
              + + +
Sbjct: 71 LMQRRGQPR 79


>gi|83309678|ref|YP_419942.1| anti-anti-sigma regulatory factor [Magnetospirillum magneticum
           AMB-1]
 gi|82944519|dbj|BAE49383.1| Anti-anti-sigma regulatory factor [Magnetospirillum magneticum
           AMB-1]
          Length = 132

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++     R  G       S++   +      SI++   +VDL+ +  +D++G  ++    
Sbjct: 40  QDDTLTVRLDGTMDYTVTSQMNSLISDI--GSIKAARVVVDLTKVARVDSVGLGMLHLAK 97

Query: 63  EK---YHGKIKLQGVSTHIEQLFSL 84
           ++       + L+G S ++ +LF L
Sbjct: 98  DEIVSNGRHLTLRGASGNVRRLFEL 122


>gi|67902764|ref|XP_681638.1| hypothetical protein AN8369.2 [Aspergillus nidulans FGSC A4]
 gi|40747733|gb|EAA66889.1| hypothetical protein AN8369.2 [Aspergillus nidulans FGSC A4]
 gi|259484298|tpe|CBF80400.1| TPA: glycosyl transferase, putative (AFU_orthologue; AFUA_4G14070)
            [Aspergillus nidulans FGSC A4]
          Length = 2822

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 51/214 (23%)

Query: 156  LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215
               ++ ++G+  +P +I I  +T                       L + +   E  +  
Sbjct: 846  FYYRITFLGIFALPALIDIMMLTTVGRGL----------------YLTTFMSSTEKTLAT 889

Query: 216  TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275
            TA+M+A        + I S         +  MG   + + +  R  A +     +T++  
Sbjct: 890  TALMVALLVCGGFGSWISS----GGSYYLYAMGFPAMSMFVMTRFIAGL----AVTLVGG 941

Query: 276  FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE--GF 333
              A I    +      I F ++F    +                    + ++A+ +  GF
Sbjct: 942  LIAFICICCIKSFAAGIVFFLYFFFLSTYL----------------MLLSVLAIYQLPGF 985

Query: 334  AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
                            V+ S   ++ I  +  ++
Sbjct: 986  QFQSG---------RTVIMSCVPILFIGPIVTLW 1010


>gi|308369779|ref|ZP_07419032.2| hypothetical protein TMBG_01195 [Mycobacterium tuberculosis
           SUMu002]
 gi|308377707|ref|ZP_07480124.2| hypothetical protein TMIG_03048 [Mycobacterium tuberculosis
           SUMu009]
 gi|308326440|gb|EFP15291.1| hypothetical protein TMBG_01195 [Mycobacterium tuberculosis
           SUMu002]
 gi|308354860|gb|EFP43711.1| hypothetical protein TMIG_03048 [Mycobacterium tuberculosis
           SUMu009]
          Length = 677

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 577 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 632

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 633 ACDRARKQGTE 643


>gi|307328257|ref|ZP_07607435.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu
          4113]
 gi|306886091|gb|EFN17099.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu
          4113]
          Length = 113

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +  TV    G        ++ + +V  +N    +   +VD+  +  +D+ G  +++  ++
Sbjct: 11 DDRTVVEVGGEIDVYTAPKLREQLVELVND--GNYHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|288942535|ref|YP_003444775.1| STAS domain-containing protein [Allochromatium vinosum DSM 180]
 gi|288897907|gb|ADC63743.1| STAS domain-containing protein [Allochromatium vinosum DSM 180]
          Length = 109

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/93 (9%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 10  RFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
              G      +  +     V++    +    S +VDL+ +   ++ G  L++ ++    +
Sbjct: 16  TLDGVLDFDTVGRLAVEGQVLLRTAAARGQASLVVDLAGVERANSAGLALLLEWLEMARR 75

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
               +    +   + +L ++ +           
Sbjct: 76  RGLHLSYAHLPDSLGRLAAVSNLGDLLAPAAPP 108


>gi|228919824|ref|ZP_04083182.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|228839840|gb|EEM85123.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
          Length = 112

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   ++  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKRNDGKLEFTGVSKRLKRLFDITGLTE 98


>gi|52080864|ref|YP_079655.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus
           licheniformis ATCC 14580]
 gi|52786236|ref|YP_092065.1| hypothetical protein BLi02497 [Bacillus licheniformis ATCC 14580]
 gi|319645179|ref|ZP_07999412.1| anti-sigma F factor antagonist [Bacillus sp. BT1B_CT2]
 gi|52004075|gb|AAU24017.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus
           licheniformis ATCC 14580]
 gi|52348738|gb|AAU41372.1| SpoIIAA [Bacillus licheniformis ATCC 14580]
 gi|317392988|gb|EFV73782.1| anti-sigma F factor antagonist [Bacillus sp. BT1B_CT2]
          Length = 117

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V   +         +++L+ ++ +D+ G  +++     +
Sbjct: 13  VLCIRLTGELDHHTAETLRKQVSDHLE-QTDIRHIVMNLADLSFMDSSGLGVVLGRYKEI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  +++LF +       +++  + +
Sbjct: 72  KQLGGEMIVCAISPAVKRLFDMSGLFKIIRLEQSEQR 108


>gi|312134332|ref|YP_004001670.1| anti-sigma-factor antagonist [Caldicellulosiruptor owensensis OL]
 gi|311774383|gb|ADQ03870.1| anti-sigma-factor antagonist [Caldicellulosiruptor owensensis OL]
          Length = 102

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +SENG+ V    G         + D +   I+ S  S   I+D++ ++ ID+ G  + + 
Sbjct: 9  VSENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIIDMNDVSYIDSTGLGVFVG 65

Query: 61 FMEKYHGKI 69
           ++K   K 
Sbjct: 66 ALKKSKQKG 74


>gi|218753076|ref|ZP_03531872.1| hypothetical protein MtubG1_06364 [Mycobacterium tuberculosis GM
           1503]
 gi|289761525|ref|ZP_06520903.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289709031|gb|EFD73047.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
          Length = 653

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 609 ACDRARKQGTE 619


>gi|297197241|ref|ZP_06914638.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197717271|gb|EDY61305.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 125

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +GITV    G      +  +   +  A          ++DLS +T +D+ G   ++   +
Sbjct: 21 DGITVLGLDGEIDHQSVGGLTRALARADAAV--GRRVVIDLSRVTFMDSSGVNALIAAFQ 78

Query: 64 KYHG 67
              
Sbjct: 79 SAQA 82


>gi|308370699|ref|ZP_07422417.2| hypothetical protein TMCG_00999 [Mycobacterium tuberculosis
           SUMu003]
 gi|308371947|ref|ZP_07426784.2| hypothetical protein TMDG_03480 [Mycobacterium tuberculosis
           SUMu004]
 gi|308373120|ref|ZP_07431090.2| hypothetical protein TMEG_01268 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374293|ref|ZP_07435490.2| hypothetical protein TMFG_02558 [Mycobacterium tuberculosis
           SUMu006]
 gi|308331163|gb|EFP20014.1| hypothetical protein TMCG_00999 [Mycobacterium tuberculosis
           SUMu003]
 gi|308334945|gb|EFP23796.1| hypothetical protein TMDG_03480 [Mycobacterium tuberculosis
           SUMu004]
 gi|308338750|gb|EFP27601.1| hypothetical protein TMEG_01268 [Mycobacterium tuberculosis
           SUMu005]
 gi|308342449|gb|EFP31300.1| hypothetical protein TMFG_02558 [Mycobacterium tuberculosis
           SUMu006]
          Length = 674

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 574 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 629

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 630 ACDRARKQGTE 640


>gi|260204626|ref|ZP_05772117.1| hypothetical protein MtubK8_10016 [Mycobacterium tuberculosis K85]
 gi|289574031|ref|ZP_06454258.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis K85]
 gi|289538462|gb|EFD43040.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis K85]
          Length = 653

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 609 ACDRARKQGTE 619


>gi|269957909|ref|YP_003327698.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
          15894]
 gi|269306590|gb|ACZ32140.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
          15894]
          Length = 140

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           T     G+    E  +  +     +   ++    ++D+  +T +D+ GA  ++   +  
Sbjct: 10 TTTLVITGDLDLAERDQFPEIASRVVG--LRRQLLVIDMCRVTFMDSTGAAFLISLADSG 67

Query: 66 HGKIKLQGVSTHIEQLFSLIS 86
            +     +    E+   ++ 
Sbjct: 68 RKRGGATVLRGADERDLFVLE 88


>gi|197117437|ref|YP_002137864.1| hypothetical protein Gbem_1047 [Geobacter bemidjiensis Bem]
 gi|197086797|gb|ACH38068.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
          Length = 105

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINK--SIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             F G+    E +E+   +V  + +    +++ A +DL  +  ID  G +L+  F+E  
Sbjct: 11 HITFQGSCSREEAAELHRALVCRLTELVERKAEQAELDLRQVDRIDACGCQLLALFLEDL 70

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
                        +L + +S  
Sbjct: 71 RRHGITPAACQLGPELAAQVSLL 93


>gi|53804035|ref|YP_114129.1| anti-sigma B factor antagonist [Methylococcus capsulatus str.
          Bath]
 gi|53757796|gb|AAU92087.1| anti-sigma B factor antagonist [Methylococcus capsulatus str.
          Bath]
          Length = 111

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 4  NGITVFRFAG--NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +G TV R  G     +    E+ D ++  +         IVDLS ++ ID+ G   ++  
Sbjct: 9  DGKTVLRL-GEPRLDAHNSGELKDFMLRLLE--GGGRHLIVDLSPVSFIDSSGLGALLSG 65

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +    +     ++    ++ ++   T   ++
Sbjct: 66 QKNAALRSGAFMLAGLQPRVHAMFELTRLHRV 97


>gi|148822586|ref|YP_001287340.1| hypothetical protein TBFG_11395 [Mycobacterium tuberculosis F11]
 gi|215403213|ref|ZP_03415394.1| hypothetical protein Mtub0_05846 [Mycobacterium tuberculosis
           02_1987]
 gi|215411011|ref|ZP_03419819.1| hypothetical protein Mtub9_06688 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215430251|ref|ZP_03428170.1| hypothetical protein MtubE_06154 [Mycobacterium tuberculosis
           EAS054]
 gi|215445546|ref|ZP_03432298.1| hypothetical protein MtubT_06242 [Mycobacterium tuberculosis T85]
 gi|219557268|ref|ZP_03536344.1| hypothetical protein MtubT1_08157 [Mycobacterium tuberculosis T17]
 gi|253799586|ref|YP_003032587.1| hypothetical protein TBMG_02614 [Mycobacterium tuberculosis KZN
           1435]
 gi|254364256|ref|ZP_04980302.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550379|ref|ZP_05140826.1| hypothetical protein Mtube_07950 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260186304|ref|ZP_05763778.1| hypothetical protein MtubCP_09782 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260200421|ref|ZP_05767912.1| hypothetical protein MtubT4_09903 [Mycobacterium tuberculosis T46]
 gi|289442808|ref|ZP_06432552.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289446960|ref|ZP_06436704.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis CPHL_A]
 gi|289554844|ref|ZP_06444054.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289569378|ref|ZP_06449605.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289745116|ref|ZP_06504494.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis 02_1987]
 gi|289753446|ref|ZP_06512824.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis EAS054]
 gi|289757469|ref|ZP_06516847.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis T85]
 gi|294994923|ref|ZP_06800614.1| hypothetical protein Mtub2_10540 [Mycobacterium tuberculosis 210]
 gi|297633919|ref|ZP_06951699.1| hypothetical protein MtubK4_07345 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730908|ref|ZP_06960026.1| hypothetical protein MtubKR_07445 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524871|ref|ZP_07012280.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|313658241|ref|ZP_07815121.1| regulator of sigma subunit, anti-anti-sigma factor RsbU
           [Mycobacterium tuberculosis KZN V2475]
 gi|134149770|gb|EBA41815.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148721113|gb|ABR05738.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253321089|gb|ACT25692.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289415727|gb|EFD12967.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289419918|gb|EFD17119.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis CPHL_A]
 gi|289439476|gb|EFD21969.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289543132|gb|EFD46780.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289685644|gb|EFD53132.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis 02_1987]
 gi|289694033|gb|EFD61462.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis EAS054]
 gi|289713033|gb|EFD77045.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis T85]
 gi|298494665|gb|EFI29959.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|323720119|gb|EGB29223.1| hypothetical protein TMMG_02067 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902987|gb|EGE49920.1| hypothetical protein TBPG_00845 [Mycobacterium tuberculosis W-148]
 gi|328459333|gb|AEB04756.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 653

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 609 ACDRARKQGTE 619


>gi|41406478|ref|NP_959314.1| hypothetical protein MAP0380 [Mycobacterium avium subsp.
          paratuberculosis K-10]
 gi|41394827|gb|AAS02697.1| hypothetical protein MAP_0380 [Mycobacterium avium subsp.
          paratuberculosis K-10]
          Length = 122

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G++V   +G         +   +   +  S  +   ++DLSA+  + ++G +++    E
Sbjct: 15 DGVSVVSVSGEIDMVTAPALEQAIGAVVADSPPA--LVIDLSAVEFLGSVGLKILAATYE 72

Query: 64 KYHGK 68
          K   +
Sbjct: 73 KLGKE 77


>gi|257051283|ref|YP_003129116.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940]
 gi|256690046|gb|ACV10383.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940]
          Length = 255

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ +    G+  + +   + ++++  I    ++  A++D++ +  IDT  A+ ++  + 
Sbjct: 143 DGVILTTVVGSLDTAKAERLTEELLDRI-VEAEASVALIDITGVAAIDTATAQHLIDTIN 201

Query: 64  K---YHGKIKLQGVSTHIEQ 80
                  ++ + G+S  I Q
Sbjct: 202 AVNLLGARVVITGISPDIAQ 221


>gi|167625599|ref|YP_001675893.1| SpoIIAA family protein [Shewanella halifaxensis HAW-EB4]
 gi|167355621|gb|ABZ78234.1| SpoIIAA family protein [Shewanella halifaxensis HAW-EB4]
          Length = 97

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 4/77 (5%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
             +G      +  +       +      D+A + LS I   D+ G   ++  +  +  K
Sbjct: 11 CSVSGRLDQDAVIRLWSGRSNILEP----DTACLQLSGIEYCDSAGVAFLLELVSIFAAK 66

Query: 69 IKLQGVSTHIEQLFSLI 85
               + +  EQL   I
Sbjct: 67 GATLKLISPSEQLKKFI 83


>gi|149183715|ref|ZP_01862125.1| RsbV [Bacillus sp. SG-1]
 gi|148848574|gb|EDL62814.1| RsbV [Bacillus sp. SG-1]
          Length = 135

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 1   MSENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL-- 57
           ++EN   +  +  G   +    ++ D +     +   +    VDLS ++ +D+ G  +  
Sbjct: 32  LNENDKVIDVKVNGEIDAYTAPKLKDALASTAEEQ--NVVMNVDLSEVSYMDSTGLGVFV 89

Query: 58  -IMYFMEKYHGKIKLQGVSTHIEQLFSL 84
            +   ++   G++ L G+S  +++LF +
Sbjct: 90  GLFKTIKANGGQLYLNGLSERLKRLFDI 117


>gi|31792560|ref|NP_855053.1| hypothetical protein Mb1399c [Mycobacterium bovis AF2122/97]
 gi|121637295|ref|YP_977518.1| hypothetical protein BCG_1426c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224989769|ref|YP_002644456.1| hypothetical protein JTY_1400 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|31618149|emb|CAD94260.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492942|emb|CAL71413.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224772882|dbj|BAH25688.1| hypothetical protein JTY_1400 [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 653

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 609 ACDRARKQGTE 619


>gi|15840822|ref|NP_335859.1| hypothetical protein MT1410 [Mycobacterium tuberculosis CDC1551]
 gi|13881019|gb|AAK45673.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis CDC1551]
          Length = 681

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 581 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 636

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 637 ACDRARKQGTE 647


>gi|308231819|ref|ZP_07413882.2| hypothetical protein TMAG_03511 [Mycobacterium tuberculosis
           SUMu001]
 gi|308378917|ref|ZP_07484315.2| hypothetical protein TMJG_03753 [Mycobacterium tuberculosis
           SUMu010]
 gi|308380055|ref|ZP_07488535.2| hypothetical protein TMKG_01868 [Mycobacterium tuberculosis
           SUMu011]
 gi|308215971|gb|EFO75370.1| hypothetical protein TMAG_03511 [Mycobacterium tuberculosis
           SUMu001]
 gi|308358833|gb|EFP47684.1| hypothetical protein TMJG_03753 [Mycobacterium tuberculosis
           SUMu010]
 gi|308362771|gb|EFP51622.1| hypothetical protein TMKG_01868 [Mycobacterium tuberculosis
           SUMu011]
          Length = 674

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 574 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 629

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 630 ACDRARKQGTE 640


>gi|238062260|ref|ZP_04606969.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149]
 gi|237884071|gb|EEP72899.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149]
          Length = 118

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 2/100 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           TV    G         + + ++  ++    +   +VDL  +  +D+ G  +++  +++  
Sbjct: 14  TVLEVGGEVDVYTAPRLRERLLELVD--GGARHVVVDLGRVDFLDSTGLGVLVGALKRLR 71

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                  +    E L  +   T   ++    P       +
Sbjct: 72  AAGGSFALVCGKEPLLKIFRITALDQVFPLHPTVDAAIGA 111


>gi|21241341|ref|NP_640923.1| anti-sigma F factor antagonist [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21106668|gb|AAM35459.1| anti-sigma F factor antagonist [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 139

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G   +    ++   +   +   I   + ++DLSA+  I + G   I    
Sbjct: 12  QDTRQRVILTGRLDTHTYQDLDAALSPLLGTLIT--TLVLDLSALEYISSAGIRCIFKAR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +      GK+ +      I ++F ++       +     +   +  + + 
Sbjct: 70  KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119


>gi|296166749|ref|ZP_06849173.1| anti-anti-sigma factor [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295897919|gb|EFG77501.1| anti-anti-sigma factor [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 122

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G++V   +G         +   +   +  +  +   ++DLSA+  + ++G +++    E
Sbjct: 15 DGVSVVSVSGEIDLVTAPALEQAIGAVVADNPAA--LVIDLSAVEFLGSVGLKILAATYE 72

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
          K         V+        +
Sbjct: 73 KLGNATGFAVVARGPATRRPI 93


>gi|239908720|ref|YP_002955462.1| anti-sigma factor antagonist family protein [Desulfovibrio
          magneticus RS-1]
 gi|239798587|dbj|BAH77576.1| anti-sigma factor antagonist family protein [Desulfovibrio
          magneticus RS-1]
          Length = 105

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 30/85 (35%), Gaps = 6/85 (7%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          +     +G +      +        +   +     ++D+S +  +D+    +++   E+ 
Sbjct: 16 VLTIALSGRFDIYTYEDFGKSYKDNLEPGV---KIVLDMSGLEYLDSSALGMLLMMRERA 72

Query: 66 HGKIKLQGV---STHIEQLFSLISF 87
           G      +   S  + ++ S + F
Sbjct: 73 GGASADITIVMCSPEVAKILSTVKF 97


>gi|56963558|ref|YP_175289.1| stage II sporulation protein AA, anti-sigma F factor antagonist
          [Bacillus clausii KSM-K16]
 gi|56909801|dbj|BAD64328.1| stage II sporulation protein AA [Bacillus clausii KSM-K16]
          Length = 114

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 36/82 (43%), Gaps = 6/82 (7%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          + + R  G        E+   +   +         +++L+ ++ +D+ G  +I+     +
Sbjct: 13 VLLVRLEGELDHHSAKELRSQIEARLEN---IQHIVLNLAELSFMDSSGLGVILGRYKQI 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          +   G++ +  +S  IE+LF +
Sbjct: 70 KANGGEMVVCAISPTIERLFEM 91


>gi|320009233|gb|ADW04083.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331]
          Length = 124

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          ++  TV R  G         +   V  A+         ++DLS +   D+ G  +++   
Sbjct: 10 QDAWTVLRIHGELDLVSSPVVRQSVHGAVAA--GRHDVVLDLSGVLFCDSSGVNVLIAAR 67

Query: 60 YFMEKYHGKIKLQ 72
            M+   G+++L 
Sbjct: 68 RLMKSCGGRLRLI 80


>gi|24215134|ref|NP_712615.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45657389|ref|YP_001475.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|24196200|gb|AAN49633.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45600628|gb|AAS70112.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 109

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEK 64
          +    GN       +I    +  I K+  S   ++DLS++  I + G  +I   +    +
Sbjct: 13 IIHLIGNLDVHNTHKIESAFMEQI-KTGNSRVIVLDLSSVEFISSAGLRIIVAALRICRE 71

Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87
             + +L G+   ++++F +I  
Sbjct: 72 KDVEFRLAGIKPAVKKVFEIIDM 94


>gi|145225514|ref|YP_001136192.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK]
 gi|315445867|ref|YP_004078746.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1]
 gi|145218000|gb|ABP47404.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK]
 gi|315264170|gb|ADU00912.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1]
          Length = 125

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +  + V    G+        ++  + +A+  +      IVD+S ++ + + G  L++   
Sbjct: 21 DGDLLVLHVTGDLDVLTAPTLSTHLDIALADAP--PVVIVDISDVSFLSSAGIGLLVETH 78

Query: 63 E 63
           
Sbjct: 79 R 79


>gi|21223746|ref|NP_629525.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)]
 gi|256785161|ref|ZP_05523592.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
 gi|289769054|ref|ZP_06528432.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
 gi|8568808|emb|CAB94557.1| putative anti-sigma factor antagonist [Streptomyces coelicolor
          A3(2)]
 gi|289699253|gb|EFD66682.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
          Length = 107

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++  +     ++DLS +   D  G  +IM   
Sbjct: 4  RGDHVELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+GV   +++L        
Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|218782310|ref|YP_002433628.1| hypothetical protein Dalk_4481 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763694|gb|ACL06160.1| hypothetical protein Dalk_4481 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 110

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           +S++   V+   G     ++  + + +    + +I+S    +  S +   DT   + +  
Sbjct: 20  VSQDMDGVYVLKGELTIHDLEYLKEFLE---SSAIRSGKVALSFSELVFADTASLQFLAS 76

Query: 61  FMEKYHGK--IKLQGVSTHIEQLFSLISFT 88
           F         + ++G+S  +E++  +    
Sbjct: 77  FKRGMGIAHGLVIEGLSPEMEKILRISGLA 106


>gi|331696201|ref|YP_004332440.1| sulfate transporter/antisigma-factor antagonist STAS
          [Pseudonocardia dioxanivorans CB1190]
 gi|326950890|gb|AEA24587.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Pseudonocardia dioxanivorans CB1190]
          Length = 105

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G       G         +   +   ++   ++ S  +DL A+  +D+ G  ++     +
Sbjct: 14 GTVEIVVTGEIDLQNAGAVERRIHDMVDN--EARSVTIDLGALEYLDSAGLRVLFTLASR 71

Query: 65 YH 66
            
Sbjct: 72 LE 73


>gi|323700029|ref|ZP_08111941.1| anti-sigma-factor antagonist [Desulfovibrio sp. ND132]
 gi|323459961|gb|EGB15826.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans ND132]
          Length = 110

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E G+ +    GN        + D V+  +         + D + +  I++ G  +++   
Sbjct: 8  EGGVVILAVDGNLDGEGTQALEDKVLALLENGTT--RLLFDFTGLDYINSSGLRVLVLAY 65

Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84
          ++     G + + GV  +I+++F +
Sbjct: 66 QRLKKNSGTVAICGVKDYIQEVFEV 90


>gi|312128430|ref|YP_003993304.1| anti-sigma-factor antagonist [Caldicellulosiruptor hydrothermalis
          108]
 gi|311778449|gb|ADQ07935.1| anti-sigma-factor antagonist [Caldicellulosiruptor hydrothermalis
          108]
          Length = 102

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +SENG+ V    G         + D +   I+ S  S+  I+D++ ++ ID+ G  + + 
Sbjct: 9  ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SNDVIIDMNDVSYIDSTGLGVFVG 65

Query: 61 FMEKYHGKI 69
           ++K   K 
Sbjct: 66 ALKKSKQKG 74


>gi|206975687|ref|ZP_03236599.1| anti sigma b factor antagonist RsbV [Bacillus cereus H3081.97]
 gi|217958579|ref|YP_002337127.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH187]
 gi|229137789|ref|ZP_04266391.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-ST26]
 gi|206746149|gb|EDZ57544.1| anti sigma b factor antagonist RsbV [Bacillus cereus H3081.97]
 gi|217064775|gb|ACJ79025.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH187]
 gi|228645646|gb|EEL01878.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-ST26]
          Length = 112

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++    +       +VD + +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIAGEKEVH--IVVDFTEVEYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K +GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNNGKLEFIGVSKRLKRLFDITGLTE 98


>gi|57116853|ref|YP_177802.1| hypothetical protein Rv1364c [Mycobacterium tuberculosis H37Rv]
 gi|148661154|ref|YP_001282677.1| hypothetical protein MRA_1373 [Mycobacterium tuberculosis H37Ra]
 gi|167969115|ref|ZP_02551392.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           tuberculosis H37Ra]
 gi|307083930|ref|ZP_07493043.1| hypothetical protein TMLG_03458 [Mycobacterium tuberculosis
           SUMu012]
 gi|1723069|sp|Q11034|Y1364_MYCTU RecName: Full=Uncharacterized protein Rv1364c/MT1410
 gi|38490259|emb|CAE55380.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148505306|gb|ABQ73115.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra]
 gi|308366418|gb|EFP55269.1| hypothetical protein TMLG_03458 [Mycobacterium tuberculosis
           SUMu012]
          Length = 653

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 609 ACDRARKQGTE 619


>gi|318041274|ref|ZP_07973230.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
           [Synechococcus sp. CB0101]
          Length = 115

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++G  +F F G   +    +    +   +  + Q    ++DLS I  ID+ G   ++   
Sbjct: 12  QDGCLLFSFTGQLDAYSEKQFLAFITEHLTSTPQP--LVIDLSKIDFIDSSGLGALVQMA 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +  + +  +Q +     ++   +     ++  + +P       S   
Sbjct: 70  KHCNDQ-AMQFLVVGNARVVQTVKLVRLEQFLHLQPDLDTALGSIAA 115


>gi|167769466|ref|ZP_02441519.1| hypothetical protein ANACOL_00800 [Anaerotruncus colihominis DSM
           17241]
 gi|167668434|gb|EDS12564.1| hypothetical protein ANACOL_00800 [Anaerotruncus colihominis DSM
           17241]
          Length = 133

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S +G  VF  AG   +    ++ D ++ A++    S   ++D + +  + + G  +++  
Sbjct: 35  SRDGTAVFALAGRLDTTTSPQLHDVLLPALD---GSCDILLDFTGLNYVSSAGLRVLLAA 91

Query: 62  MEKYHGKI---KLQGVSTHIEQLFSLISFTH 89
            ++         L+GV   I ++F +  F+ 
Sbjct: 92  QKQSKAAGVCMSLRGVCDEIMEVFDMTGFSD 122


>gi|311068944|ref|YP_003973867.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus atrophaeus
           1942]
 gi|310869461|gb|ADP32936.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus atrophaeus
           1942]
          Length = 117

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 39/97 (40%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V  ++         +++L  ++ +D+ G  +I+     +
Sbjct: 13  VLCIRLTGELDHHTAESLKQKVAKSLEDE-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  +++LF +       + +  + Q
Sbjct: 72  KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 108


>gi|256377807|ref|YP_003101467.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255922110|gb|ACU37621.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 121

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 2/107 (1%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            +G+ + R  G   +     I  +V+  ++++    + ++DL  +    + G  L+    
Sbjct: 12  SDGVLITRITGEVDAASTDPIRAEVLDQLDQAT--GALVLDLREVVFFGSSGISLLAESY 69

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
            +   +     V      +   +  T        KP       + + 
Sbjct: 70  ARAQRRGLALAVVADQRAVLRPLQVTGMADSLLIKPTLDEAVEAVRA 116


>gi|226311981|ref|YP_002771875.1| anti-sigma-F factor antagonist [Brevibacillus brevis NBRC 100599]
 gi|226094929|dbj|BAH43371.1| anti-sigma-F factor antagonist [Brevibacillus brevis NBRC 100599]
          Length = 116

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +   + V R  G        E+       + ++      ++ L+ +T +D+ G  +I+
Sbjct: 9  TRQDVLVIRLQGELDHHTAEELRKKADDLL-RTSTIRHIVLSLADLTFMDSSGIGVIL 65


>gi|166710006|ref|ZP_02241213.1| hypothetical protein Xoryp_00595 [Xanthomonas oryzae pv.
          oryzicola BLS256]
          Length = 96

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/88 (9%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66
              G      ++ +    +  ++      +  +DL+ +  +D+ G  ++     +    
Sbjct: 13 LVITGVLDRAAVTAVWPQAIAQLD-----GARTLDLAGVQRLDSAGVAMLAELAARLRHT 67

Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
          G   + G ++ +++L +    +     +
Sbjct: 68 GSGAVVGEASGLDELRAAYRLSPTLDFQ 95


>gi|288923128|ref|ZP_06417276.1| anti-sigma-factor antagonist [Frankia sp. EUN1f]
 gi|288345535|gb|EFC79916.1| anti-sigma-factor antagonist [Frankia sp. EUN1f]
          Length = 181

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 5/103 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             + R  G             ++ A+++  Q     VDL  ++ +D  G  +++   ++ 
Sbjct: 53  RAIVRAHGEIDMATGEAFRAALIAALDQQPQ--MLTVDLDGVSFLDACGLGILVGVAKQA 110

Query: 66  HGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
             +   I +     HI  LF L     R  +       +    
Sbjct: 111 ARRSVPIVVISARPHIYHLFELTHLVDRLDVHAGPTPPATRLP 153


>gi|126650130|ref|ZP_01722363.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
           [Bacillus sp. B14905]
 gi|169827280|ref|YP_001697438.1| anti-sigma F factor antagonist [Lysinibacillus sphaericus C3-41]
 gi|126593302|gb|EAZ87264.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
           [Bacillus sp. B14905]
 gi|168991768|gb|ACA39308.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA)
           [Lysinibacillus sphaericus C3-41]
          Length = 127

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62
             V R  G      + +I   +  AI       + I +L  ++ +D+ G  L+   M  +
Sbjct: 22  TVVIRLFGELDHHAVEQIRAKISAAIF-QGTVTTIIWNLEGLSFMDSSGVGLVLGRMREL 80

Query: 63  EKYHGKIKLQGVSTHIEQLFSL 84
           E   G+  L   S  + ++F  
Sbjct: 81  EAVAGRTILLNPSPTMRKVFQF 102


>gi|18311032|ref|NP_562966.1| anti-sigma F factor antagonist [Clostridium perfringens str. 13]
 gi|110801393|ref|YP_696730.1| anti-sigma F factor antagonist [Clostridium perfringens ATCC
          13124]
 gi|110801809|ref|YP_699331.1| anti-sigma F factor antagonist [Clostridium perfringens SM101]
 gi|168205858|ref|ZP_02631863.1| anti-sigma F factor antagonist [Clostridium perfringens E str.
          JGS1987]
 gi|168208752|ref|ZP_02634377.1| anti-sigma F factor antagonist [Clostridium perfringens B str.
          ATCC 3626]
 gi|168212913|ref|ZP_02638538.1| anti-sigma F factor antagonist [Clostridium perfringens CPE str.
          F4969]
 gi|168215677|ref|ZP_02641302.1| anti-sigma F factor antagonist [Clostridium perfringens NCTC
          8239]
 gi|169343531|ref|ZP_02864530.1| anti-sigma F factor antagonist [Clostridium perfringens C str.
          JGS1495]
 gi|182624032|ref|ZP_02951820.1| anti-sigma F factor antagonist [Clostridium perfringens D str.
          JGS1721]
 gi|18145714|dbj|BAB81756.1| anti-sigma F factor antagonist [Clostridium perfringens str. 13]
 gi|110676040|gb|ABG85027.1| anti-sigma F factor antagonist [Clostridium perfringens ATCC
          13124]
 gi|110682310|gb|ABG85680.1| anti-sigma F factor antagonist [Clostridium perfringens SM101]
 gi|169298091|gb|EDS80181.1| anti-sigma F factor antagonist [Clostridium perfringens C str.
          JGS1495]
 gi|170662623|gb|EDT15306.1| anti-sigma F factor antagonist [Clostridium perfringens E str.
          JGS1987]
 gi|170713098|gb|EDT25280.1| anti-sigma F factor antagonist [Clostridium perfringens B str.
          ATCC 3626]
 gi|170715524|gb|EDT27706.1| anti-sigma F factor antagonist [Clostridium perfringens CPE str.
          F4969]
 gi|177910925|gb|EDT73279.1| anti-sigma F factor antagonist [Clostridium perfringens D str.
          JGS1721]
 gi|182382199|gb|EDT79678.1| anti-sigma F factor antagonist [Clostridium perfringens NCTC
          8239]
          Length = 111

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
            + V    G        E+   +   I++       ++D S +T +D+ G  +I+
Sbjct: 9  GNVLVVSLIGELDHHSAEEVRVKIDDRISRE-NIRKLVLDFSGVTFMDSSGIGVII 63


>gi|320355255|ref|YP_004196594.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfobulbus
          propionicus DSM 2032]
 gi|320123757|gb|ADW19303.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfobulbus
          propionicus DSM 2032]
          Length = 111

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +E    V    G   +    E    V   +    +S   IVD   +  I + G   ++  
Sbjct: 7  TEGSTLVLALTGKLDAVTAPEFEKKVNELLAA--ESCVLIVDCERLDYISSAGLRALLAT 64

Query: 62 MEK---YHGKIKLQGVSTHIEQLFSL 84
           ++     G+++   V+  + ++F +
Sbjct: 65 AKRSKSRGGQVRCANVTGSVREVFDI 90


>gi|188532483|ref|YP_001906280.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99]
 gi|188027525|emb|CAO95372.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99]
          Length = 98

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 30/82 (36%), Gaps = 8/82 (9%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65
              G  +   +  +         + +      +D+S +  +D+ G  L+++  +    +
Sbjct: 14 LCLIGELERETLLPLWQQ-----REQVMEHVESIDVSGLERVDSGGLALLVHLRQIAILH 68

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
              +  G++  +  L +L + 
Sbjct: 69 GRNPRFTGINDRLNSLIALYNL 90


>gi|115523221|ref|YP_780132.1| anti-sigma-factor antagonist [Rhodopseudomonas palustris BisA53]
 gi|115517168|gb|ABJ05152.1| anti-sigma-factor antagonist [Rhodopseudomonas palustris BisA53]
          Length = 99

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +       +G+    +     +           + +  +++S +  ID+ G  +++   E
Sbjct: 7  DNDATVALSGDLTFTDHVAFREIADRL--ARCSARTVTIEVSNLKFIDSAGLGMLLIARE 64

Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFT 88
          +    +  + L+G    + ++F L  F 
Sbjct: 65 EAVKSNRTLVLRGAQGQVNRMFELTKFA 92


>gi|303326936|ref|ZP_07357378.1| putative anti-sigma factor antagonist [Desulfovibrio sp.
          3_1_syn3]
 gi|302862924|gb|EFL85856.1| putative anti-sigma factor antagonist [Desulfovibrio sp.
          3_1_syn3]
          Length = 117

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          I + R  G+    ++ E    +   I         +VDLS    +D  G  +++    K 
Sbjct: 12 IIILRLTGDILLADVVEFNQQMKNHIAA-PDIAQVVVDLSRAGRMDNAGLGVLVSISTKL 70

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRK 91
           G+ +   +      +  L+     +
Sbjct: 71 QGRGRRLILLCPAPHVAQLLKDAEVE 96


>gi|284991070|ref|YP_003409624.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM
          43160]
 gi|284064315|gb|ADB75253.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM
          43160]
          Length = 114

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +E+G      AG   +     +   +   + +       ++DLS I  + + G  +++  
Sbjct: 16 AEDGAVTVTAAGEVDTFTAPLLRSVLDTQLQRHPT--ELVIDLSGIQFLGSAGLAVLVET 73

Query: 62 MEKYHGK 68
           +    +
Sbjct: 74 HKSARDR 80


>gi|329939847|ref|ZP_08289148.1| anti-sigma factor antagonist [Streptomyces griseoaurantiacus
          M045]
 gi|329301417|gb|EGG45312.1| anti-sigma factor antagonist [Streptomyces griseoaurantiacus
          M045]
          Length = 107

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++  +     ++DLS +   D  G  +IM   
Sbjct: 4  RGDHAGLVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSGLDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+GV   +++L        
Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|158320825|ref|YP_001513332.1| anti-sigma-factor antagonist [Alkaliphilus oremlandii OhILAs]
 gi|158141024|gb|ABW19336.1| anti-sigma-factor antagonist [Alkaliphilus oremlandii OhILAs]
          Length = 111

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
              + +F G         I  ++   I++  ++ + I DLS +  +D+ G  +I+    
Sbjct: 9  ENTLIVQFDGELDHHFAESIRTELDDMISQQ-RAKNLIFDLSGMKFMDSSGIGVIIGRYK 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87
           + K+ GK+ +  V+  I+++F L   
Sbjct: 68 NISKFGGKVSVIHVADKIDKIFHLAGL 94


>gi|58579929|ref|YP_198945.1| hypothetical protein XOO0306 [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|84621934|ref|YP_449306.1| hypothetical protein XOO_0277 [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|58424523|gb|AAW73560.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|84365874|dbj|BAE67032.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
          MAFF 311018]
          Length = 96

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66
              G      ++ I    +  ++      +  +DL+ +  +D+ G  ++     +    
Sbjct: 13 LVITGVLDRAAVTAIWPQAIAQLD-----GARTLDLAGVQRLDSAGVAMLAELAARLRHT 67

Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
          G   + G ++ +++L +    +     +
Sbjct: 68 GSGAVVGEASGLDELRAAYRLSPTLDFQ 95


>gi|302867451|ref|YP_003836088.1| sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
 gi|315506139|ref|YP_004085026.1| sulfate transporter/antisigma-factor antagonist stas
           [Micromonospora sp. L5]
 gi|302570310|gb|ADL46512.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora aurantiaca ATCC 27029]
 gi|315412758|gb|ADU10875.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Micromonospora sp. L5]
          Length = 188

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 31/93 (33%)

Query: 17  SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76
           + ++            +S++ D  +VDLS +  ID+ G  L++   +      +   + +
Sbjct: 83  AHDLDPATAVRRALDERSLRDDMELVDLSGLEVIDSAGLSLLVRAHQDARRDGRRLCLLS 142

Query: 77  HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
               + +++       +      R         
Sbjct: 143 PSRFVLTVLHTMRLDGVFTVVDGRVPAPGPATR 175


>gi|302879180|ref|YP_003847744.1| Sulfate transporter/antisigma-factor antagonist STAS [Gallionella
          capsiferriformans ES-2]
 gi|302581969|gb|ADL55980.1| Sulfate transporter/antisigma-factor antagonist STAS [Gallionella
          capsiferriformans ES-2]
          Length = 107

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQG 73
          +      +     ++ A+N     D   +DLS + E+DT G ++++    +     K   
Sbjct: 13 DMTIYNAAVQKQTLLDALN---TCDELDLDLSQVAEMDTAGFQVLLLTKREAIKAGKAVH 69

Query: 74 VSTHIEQLFSLISF 87
          ++ H + +  ++  
Sbjct: 70 LTAHSKAVTEVLDL 83


>gi|300787747|ref|YP_003768038.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299797261|gb|ADJ47636.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 100

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++G  V   AG       +E    +   +       +  VDL+ ++ +D+ G  ++   +
Sbjct: 13 DDGDRVLSVAGEIDMSNAAEFGAALDGELAA---GAAVTVDLTGVSYLDSAGVAVLFDRV 69

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88
           ++  ++    +   + ++  L    
Sbjct: 70 GEHDLRLVAPPLLDRVLRVSGLTQVA 95


>gi|229542545|ref|ZP_04431605.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1]
 gi|229326965|gb|EEN92640.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1]
          Length = 124

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62
                 +G   +    ++ +       K+      ++DL+ ++ +D+ G  +++     +
Sbjct: 28  TLNVTISGEIDAFTAPKLREAFEPYEGKA--GLEVLIDLTNVSYMDSTGLGVLVGLFKSL 85

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTH 89
               G + L G+S  +++LF +   + 
Sbjct: 86  RANGGMLTLTGLSDRLKRLFDITGLSD 112


>gi|115372701|ref|ZP_01460007.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310823497|ref|YP_003955855.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1]
 gi|115370182|gb|EAU69111.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309396569|gb|ADO74028.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1]
          Length = 127

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 2/94 (2%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
                G     ++  + +++   + + +    A+VD S +  +D  G + ++   E +  
Sbjct: 22  TLCLEGELSEQDLHGVCEELFRRLQRGL--RQAVVDFSEVAHMDYRGVKGLVARAEGFRR 79

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
                 +S     L +++            P  S
Sbjct: 80  AGGDIKLSGLSPYLAAILRAAGAHGAFEVYPHMS 113


>gi|297200444|ref|ZP_06917841.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197709566|gb|EDY53600.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 126

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          +   TV   +G         +   V  A+ +     S ++DLS +   D+ G  +++   
Sbjct: 12 QGEWTVLSVSGELDLVTSPVLRGRVHDAVAE--GRHSLVLDLSEVYFCDSSGVGVLIASR 69

Query: 60 YFMEKYHGKIKLQ 72
            +    GK++L 
Sbjct: 70 RLIHSCRGKLRLI 82


>gi|158312886|ref|YP_001505394.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
 gi|158108291|gb|ABW10488.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec]
          Length = 142

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 4/117 (3%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E G    R AG      + E+   +  AI+         VD+  +   D  G  +++   
Sbjct: 17  EGGNQTLRLAGTVDVRSVGELRMLLHNAIDA--GRGPLHVDVGGLELGDHAGVGVLLGGA 74

Query: 63  EKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
            +     +   +      L  L++     R       P R          H  +G  
Sbjct: 75  RRARALGRTLVLVDASAALGRLLAIDRLGRLLRVQIAPDRLTAVPPGAGGHGTVGHA 131


>gi|76810142|ref|YP_335063.1| hypothetical protein BURPS1710b_3700 [Burkholderia pseudomallei
           1710b]
 gi|76579595|gb|ABA49070.1| hypothetical protein BURPS1710b_3700 [Burkholderia pseudomallei
           1710b]
          Length = 636

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 3/76 (3%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71
           +G       S  A   +      I++ +  VD  A+ + D+    +++ +      +   
Sbjct: 553 SGA-TLTHAS--AKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVT 609

Query: 72  QGVSTHIEQLFSLISF 87
             +     +L SL   
Sbjct: 610 LDIENLPPKLASLAQA 625


>gi|254231615|ref|ZP_04924942.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|124600674|gb|EAY59684.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
          Length = 653

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGITPVTIDLSAVTHLGSAGVGALAA 608

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 609 ACDRARKQGTE 619


>gi|320107759|ref|YP_004183349.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4]
 gi|319926280|gb|ADV83355.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4]
          Length = 115

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
          +GITV   +G     E S    D +  +    Q  S +++L  ++ +D+ G   ++    
Sbjct: 11 DGITVLDLSGRITLGEGSVTLRDAIRDLINKGQ-KSILLNLGDVSYLDSSGLGELVTAYT 69

Query: 62 -MEKYHGKIKLQGVSTHIEQLFSL 84
           ++   G++KL  ++  ++ L  +
Sbjct: 70 SVKNSGGELKLLNLTKKVQDLLQI 93


>gi|56420845|ref|YP_148163.1| anti-sigma F factor antagonist [Geobacillus kaustophilus HTA426]
 gi|261417854|ref|YP_003251536.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61]
 gi|297529522|ref|YP_003670797.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3]
 gi|319767334|ref|YP_004132835.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC52]
 gi|50513738|pdb|1TH8|B Chain B, Crystal Structures Of The Adp And Atp Bound Forms Of The
          Bacillus Anti-Sigma Factor Spoiiab In Complex With The
          Anti-Anti-Sigma Spoiiaa: Inhibitory Complex With Adp,
          Crystal Form Ii
 gi|50513740|pdb|1THN|B Chain B, Crystal Structures Of The Adp And Atp Bound Forms Of The
          Bacillus Anti-Sigma Factor Spoiiab In Complex With The
          Anti-Anti-Sigma Spoiiaa: Inhibitory Complex With Adp,
          Crystal Form I
 gi|50513742|pdb|1THN|D Chain D, Crystal Structures Of The Adp And Atp Bound Forms Of The
          Bacillus Anti-Sigma Factor Spoiiab In Complex With The
          Anti-Anti-Sigma Spoiiaa: Inhibitory Complex With Adp,
          Crystal Form I
 gi|56380687|dbj|BAD76595.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Geobacillus kaustophilus HTA426]
 gi|261374311|gb|ACX77054.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61]
 gi|297252774|gb|ADI26220.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3]
 gi|317112200|gb|ADU94692.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC52]
          Length = 116

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           + + R +G        E+ + V   +         +++L  +T +D+ G  +I+     
Sbjct: 12 DVLIVRLSGELDHHTAEELREQVTDVLENR-AIRHIVLNLGQLTFMDSSGLGVILGRYKQ 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          ++   G++ +  VS  +++LF +
Sbjct: 71 IKNVGGQMVVCAVSPAVKRLFDM 93


>gi|330877176|gb|EGH11325.1| STAS domain-containing protein [Pseudomonas syringae pv.
          morsprunorum str. M302280PT]
 gi|330964021|gb|EGH64281.1| STAS domain-containing protein [Pseudomonas syringae pv.
          actinidiae str. M302091]
          Length = 101

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           +  G         +      A+ KS       +D S + +  ++G  L++ FM      
Sbjct: 14 LKLTGVLDYRTGPHLRKQ-GAALIKSGDLSELTLDCSGVEKSSSVGLALLLAFMRDARDA 72

Query: 69 IKLQGVSTHIEQLFSLIS 86
           K   V    E +  +  
Sbjct: 73 GKSITVQALPEDMRQIAR 90


>gi|308375442|ref|ZP_07443933.2| hypothetical protein TMGG_01936 [Mycobacterium tuberculosis
           SUMu007]
 gi|308376702|ref|ZP_07439737.2| hypothetical protein TMHG_00552 [Mycobacterium tuberculosis
           SUMu008]
 gi|308346289|gb|EFP35140.1| hypothetical protein TMGG_01936 [Mycobacterium tuberculosis
           SUMu007]
 gi|308350217|gb|EFP39068.1| hypothetical protein TMHG_00552 [Mycobacterium tuberculosis
           SUMu008]
          Length = 580

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 480 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 535

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 536 ACDRARKQGTE 546


>gi|302558813|ref|ZP_07311155.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302476431|gb|EFL39524.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 156

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/107 (8%), Positives = 26/107 (24%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V   +G      +S   D +   +         + D++ +         L+         
Sbjct: 46  VLVLSGPLTGDGVSGPCDALRTLLEGGGPGRVVVCDVAGLGPPGLAAVNLLARLQLTARR 105

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
                 +      L +L+     +     +P++       +      
Sbjct: 106 SGGRIRLRDPSAALCALLDLVGLRFETEGQPEQREPPLGVQEAVEAR 152


>gi|312794379|ref|YP_004027302.1| anti-sigma-factor antagonist [Caldicellulosiruptor kristjanssonii
          177R1B]
 gi|312181519|gb|ADQ41689.1| anti-sigma-factor antagonist [Caldicellulosiruptor kristjanssonii
          177R1B]
          Length = 102

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +SENG+ V    G         + D +   I+ S  S   I+D++ ++ ID+ G  + + 
Sbjct: 9  ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIIDMNDVSYIDSTGLGVFVG 65

Query: 61 FMEKYHGKI 69
           ++K   K 
Sbjct: 66 ALKKSKQKG 74


>gi|292486815|ref|YP_003529685.1| hypothetical protein EAMY_0327 [Erwinia amylovora CFBP1430]
 gi|292900787|ref|YP_003540156.1| hypothetical protein EAM_3093 [Erwinia amylovora ATCC 49946]
 gi|291200635|emb|CBJ47767.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291552232|emb|CBA19269.1| Uncharacterized protein yrbB [Erwinia amylovora CFBP1430]
          Length = 98

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65
           R  G  +   +  +         +++      +D+SA+  +D+ G  L+++  +     
Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMQHVETIDVSALQRVDSGGLALLVHLQQIAIDN 68

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
            K +  G++  +  L +L + 
Sbjct: 69 GRKPRFSGITDKLNSLITLYNL 90


>gi|222528458|ref|YP_002572340.1| anti-sigma-factor antagonist [Caldicellulosiruptor bescii DSM
          6725]
 gi|312623244|ref|YP_004024857.1| anti-sigma-factor antagonist [Caldicellulosiruptor kronotskyensis
          2002]
 gi|222455305|gb|ACM59567.1| anti-sigma-factor antagonist [Caldicellulosiruptor bescii DSM
          6725]
 gi|312203711|gb|ADQ47038.1| anti-sigma-factor antagonist [Caldicellulosiruptor kronotskyensis
          2002]
          Length = 102

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +SENG+ V    G         + D +   I+ S  S   I+D++ ++ ID+ G  + + 
Sbjct: 9  ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIIDMNDVSYIDSTGLGVFVG 65

Query: 61 FMEKYHGKI 69
           ++K   K 
Sbjct: 66 ALKKSKQKG 74


>gi|220921550|ref|YP_002496851.1| sulphate transporter [Methylobacterium nodulans ORS 2060]
 gi|219946156|gb|ACL56548.1| sulphate transporter [Methylobacterium nodulans ORS 2060]
          Length = 568

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 8/119 (6%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S+  + V+R +G +     + +   +     +     + ++DLS +  +D+  A  I  F
Sbjct: 457 SDPNVIVYRISGAFFFGAAATVGAALDRLGER---PKAYVIDLSEVPLLDSTAAATIEGF 513

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             K   +     V+     +  ++     +      PQ  F  +  + +    G+  V+
Sbjct: 514 ARKAGRQGATVTVAGARPPIRRVLLTHGVR-----PPQVRFRSSVAEAVREAGGRATVE 567


>gi|312170883|emb|CBX79142.1| Uncharacterized protein yrbB [Erwinia amylovora ATCC BAA-2158]
          Length = 98

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65
           R  G  +   +  +         +++      +D+SA+  +D+ G  L+++  +     
Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMQHVETIDVSALQRVDSGGLALLVHLQQIAIDN 68

Query: 66 HGKIKLQGVSTHIEQLFSLISF 87
            K +  G++  +  L +L + 
Sbjct: 69 GRKPRFSGITDKLNSLITLYNL 90


>gi|188579089|ref|YP_001916018.1| hypothetical protein PXO_03207 [Xanthomonas oryzae pv. oryzae
          PXO99A]
 gi|188523541|gb|ACD61486.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
          PXO99A]
          Length = 91

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66
              G      ++ I    +  ++      +  +DL+ +  +D+ G  ++     +    
Sbjct: 8  LVITGVLDRAAVTAIWPQAIAQLD-----GARTLDLAGVQRLDSAGVAMLAELAARLRHT 62

Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94
          G   + G ++ +++L +    +     +
Sbjct: 63 GSGAVVGEASGLDELRAAYRLSPTLDFQ 90


>gi|134100288|ref|YP_001105949.1| hypothetical protein SACE_3753 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007867|ref|ZP_06565840.1| hypothetical protein SeryN2_25361 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912911|emb|CAM03024.1| hypothetical protein SACE_3753 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 155

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G+ V    G      +  + + +   +  +    + ++DLS +T   + G EL+++   +
Sbjct: 52  GVVVVSMQGEIDLACVPRLTELIRQRLTAA-SLRAVVLDLSGVTYSSSSGLELLIHAQRR 110

Query: 65  YHGKI 69
              + 
Sbjct: 111 AEHRG 115


>gi|302531664|ref|ZP_07284006.1| predicted protein [Streptomyces sp. AA4]
 gi|302440559|gb|EFL12375.1| predicted protein [Streptomyces sp. AA4]
          Length = 117

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G        ++ + +   +     S   + DL+ +T  D+    ++++   +   +
Sbjct: 26  VVVTGELDLLTSPQLQEAL-AGLIADKNSRRVVADLTGVTFFDSSALNVVLHAQRQAGEQ 84

Query: 69  IKLQGV--STHIEQLFSLISFTHRKKIKNQKPQ 99
                V  S  + ++  L        +  + P 
Sbjct: 85  DVELEVVPSPAVSRVIELTGVAEHLSVSEEPPA 117


>gi|464791|sp|P35147|SP2AA_BACME RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage
          II sporulation protein AA
 gi|580788|emb|CAA45286.1| spoIIAA [Bacillus megaterium]
          Length = 116

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + + R  G        E+   +  AI K   S   I++L  +T +D+ G  +I+   ++
Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70

Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84
               G++ +  +S  IE+LF++
Sbjct: 71 VHNNGGEMVVCAISPAIERLFNM 93


>gi|254387241|ref|ZP_05002504.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194346049|gb|EDX27015.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 114

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           S     V    G      +  + + +  A ++       ++D S+IT  D+    L++  
Sbjct: 18  SAGSGWVVAARGELDQDTLGPLEEALASAADRH---RLVVLDASSITFGDSSFLNLLLRL 74

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
                 +I   G    + +LF+L        +     +
Sbjct: 75  HHATGLRIAAPG--EQLRRLFALTGADTVLSVHPSVEE 110


>gi|254380860|ref|ZP_04996226.1| anti-sigma factor antagonist [Streptomyces sp. Mg1]
 gi|194339771|gb|EDX20737.1| anti-sigma factor antagonist [Streptomyces sp. Mg1]
          Length = 112

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/101 (9%), Positives = 26/101 (25%), Gaps = 2/101 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
             V    G       +++ D +     K       ++DL+ +   D+ G   ++      
Sbjct: 14  GPVVEVTGELDYDTSADLRDLLAALPLK--PGQRLVLDLARMEFCDSSGISTLIVARNHA 71

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106
                   ++        ++      +I    P        
Sbjct: 72  QSAGADVALAAVPASTLRVLRVVGLDQIFPLHPHAESAIGP 112


>gi|220919629|ref|YP_002494932.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060]
 gi|219952049|gb|ACL62440.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060]
          Length = 235

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 12/111 (10%)

Query: 45  SAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104
           + +  +DT     +   +       +  G   ++  L   I+     +    +P   F  
Sbjct: 78  ARLFALDTA----LRRTIRALWRTCRYPGDPPYLAGLLHQIA---VGRFDPHRPPWLFHP 130

Query: 105 NSFKNLHYHIGKKIVKFI-----NDSCSQAHILGLVISNTGEFCASSYKFK 150
            +F      IG++ V         +       LG  I           + +
Sbjct: 131 ATFDAAFRRIGRRTVGGGPKTAPANELVFRGNLGAGILFLTSRVRLIDRRR 181


>gi|49481541|ref|YP_035250.1| anti-sigma B factor antagonist (RsbV) [Bacillus thuringiensis
          serovar konkukian str. 97-27]
 gi|49333097|gb|AAT63743.1| anti-sigma B factor antagonist (RsbV) [Bacillus thuringiensis
          serovar konkukian str. 97-27]
          Length = 111

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 8  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--MVVDFTEVEYMDSTGLGVFIA 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K +GK++  GVS  +++LF +   T 
Sbjct: 66 LLKAVKKNNGKLEFIGVSKRLKRLFDITGLTE 97


>gi|296170351|ref|ZP_06851942.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895074|gb|EFG74793.1| sensory box protein/anti-anti-sigma factor [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 654

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++E G  V   +G+  S   S +   +  A+          +DLSA+T++ + G   +  
Sbjct: 554 VAEPGRIVV--SGDVDSHTASTLDRQI--AVESRSGIAPLTIDLSAVTQLGSAGVSALAA 609

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 610 ARDRAQRQGSE 620


>gi|297588050|ref|ZP_06946694.1| anti-sigma B factor antagonist [Finegoldia magna ATCC 53516]
 gi|297574739|gb|EFH93459.1| anti-sigma B factor antagonist [Finegoldia magna ATCC 53516]
          Length = 110

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          + R  G+       E  DD++    K+ +     +D + ++ ID+ G   ++    +  
Sbjct: 21 IVRIQGDLDINTCDEFRDDLLEEYKKNPKD--IRIDATDLSFIDSTGLGALIKVYNELR 77


>gi|153955770|ref|YP_001396535.1| hypothetical protein CKL_3156 [Clostridium kluyveri DSM 555]
 gi|219856137|ref|YP_002473259.1| hypothetical protein CKR_2794 [Clostridium kluyveri NBRC 12016]
 gi|146348628|gb|EDK35164.1| SpoIIAA [Clostridium kluyveri DSM 555]
 gi|219569861|dbj|BAH07845.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 111

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKI 69
          G        E+ + +   ++     +  I+D S ++ +D+ G  +++     +    GK+
Sbjct: 18 GELDHHSTEEVRNKIDNQLD-VEGINKLILDFSQVSFMDSSGIGVVIGRYKKLNAKKGKV 76

Query: 70 KLQGVSTHIEQLFSL 84
           + GVS  + ++F L
Sbjct: 77 CIVGVSPSVRRVFEL 91


>gi|383706|prf||1904152A spoIIAA gene
          Length = 116

 Score = 37.3 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           + + R  G        E+   +  AI K   S   I++L  +T +D+ G  +I+   ++
Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70

Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84
               G++ +  +S  IE+LF++
Sbjct: 71 VHNNGGEMVVCAISPAIERLFNM 93


>gi|23098083|ref|NP_691549.1| positive regulator of sigma-B activity [Oceanobacillus iheyensis
          HTE831]
 gi|22776308|dbj|BAC12584.1| positive regulator of sigma-B activity (anti-anti-sigma factor)
          [Oceanobacillus iheyensis HTE831]
          Length = 110

 Score = 37.3 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           NG  V + AG   +    ++ + ++  +  S  S++  VDL  +  +D+ G  + +  +
Sbjct: 10 SNGQVVLKVAGEIDAYTAPKLKETLLPLVKDS--SNNIQVDLEEVNYMDSTGLGVFVSAL 67

Query: 63 EK 64
          + 
Sbjct: 68 KA 69


>gi|237798609|ref|ZP_04587070.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. oryzae str. 1_6]
 gi|331021462|gb|EGI01519.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. oryzae str. 1_6]
          Length = 101

 Score = 37.3 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           +  G        ++      A+ KS       +D S + +  ++G  L++ FM      
Sbjct: 14 LKLIGVLDYRTGPQLRKQ-GAALIKSGDLPELTLDCSGVEKSSSVGLALLLAFMRDARDA 72

Query: 69 IKLQGVSTHIEQLFSLIS 86
           K   V +  E +  +  
Sbjct: 73 GKSITVRSLPEDMRQIAR 90


>gi|297193756|ref|ZP_06911154.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
          25486]
 gi|197723165|gb|EDY67073.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
          25486]
          Length = 125

 Score = 37.3 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          +   TV    G         +   V  A+         ++DLS +   D+ G  +++   
Sbjct: 11 QGSWTVLHVRGELDLVSSPVVRQRVHDAVAA--GHHDVVLDLSEVFFCDSSGVGVLIAAR 68

Query: 60 YFMEKYHGKIKLQ 72
            M    G+++L 
Sbjct: 69 RLMRSCRGRLRLI 81


>gi|28871578|ref|NP_794197.1| STAS domain-containing protein [Pseudomonas syringae pv. tomato
          str. DC3000]
 gi|213966601|ref|ZP_03394752.1| STAS domain protein [Pseudomonas syringae pv. tomato T1]
 gi|301383111|ref|ZP_07231529.1| STAS domain protein [Pseudomonas syringae pv. tomato Max13]
 gi|302058650|ref|ZP_07250191.1| STAS domain protein [Pseudomonas syringae pv. tomato K40]
 gi|302133827|ref|ZP_07259817.1| STAS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28854830|gb|AAO57892.1| STAS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213928451|gb|EEB61995.1| STAS domain protein [Pseudomonas syringae pv. tomato T1]
 gi|331016697|gb|EGH96753.1| STAS domain protein [Pseudomonas syringae pv. lachrymans str.
          M302278PT]
          Length = 101

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           +  G         +      A+ KS       +D S + +  ++G  L++ FM      
Sbjct: 14 LKLTGVLDYRTGPHLRKQ-GAALIKSGDLSELTLDCSGVEKSSSVGLALLLAFMRDARDA 72

Query: 69 IKLQGVSTHIEQLFSLIS 86
           K   V +  E +  +  
Sbjct: 73 GKSITVQSLPEDMRQIAR 90


>gi|320104165|ref|YP_004179756.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644]
 gi|319751447|gb|ADV63207.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644]
          Length = 111

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFT 88
               + D+S I  +D+ G  +++  + +     G ++L G+S  +  LF L+   
Sbjct: 39 SHSHVVFDMSKIAFVDSSGCGVLLSCLRELNSRGGDLRLCGLSPQVRSLFELVRMH 94


>gi|157692846|ref|YP_001487308.1| stage II sporulation anti-anti-sigma factor [Bacillus pumilus
           SAFR-032]
 gi|157681604|gb|ABV62748.1| stage II sporulation anti-anti-sigma factor [Bacillus pumilus
           SAFR-032]
          Length = 117

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V   +         +++L+ +T +D+ G  +I+     +
Sbjct: 13  VLCIRLTGELDHHSAETLRQKVTNYLETE-DIRHIVLNLADLTFMDSSGLGVILGRYKEI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           ++  G++ +  +S  + +LF +       +++  + 
Sbjct: 72  KQLGGEMVVCAISPAVNRLFDMSGLFKIIRMEPSEQ 107


>gi|289749920|ref|ZP_06509298.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
           tuberculosis T92]
 gi|289690507|gb|EFD57936.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
           tuberculosis T92]
          Length = 552

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E+G  V R  G+  S   + +   +  A+          +DLSA+T + + G   +  
Sbjct: 452 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 507

Query: 61  FMEKYHGKIKL 71
             ++   +   
Sbjct: 508 ACDRARKQGTE 518


>gi|138895882|ref|YP_001126335.1| anti-sigma F factor antagonist [Geobacillus thermodenitrificans
          NG80-2]
 gi|196248771|ref|ZP_03147471.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16]
 gi|134267395|gb|ABO67590.1| Anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Geobacillus thermodenitrificans NG80-2]
 gi|196211647|gb|EDY06406.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16]
          Length = 116

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           + + R +G        E+ + V   +         +++L  +T +D+ G  +I+     
Sbjct: 12 DVLIVRLSGELDHHTAEELREKVTDVLENR-TVRHIVLNLGQLTFMDSSGLGVILGRYKQ 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84
          ++   G++ +  VS  +++LF +
Sbjct: 71 IKNVGGQMVVCAVSPTVKRLFDM 93


>gi|319950629|ref|ZP_08024534.1| anti-sigma-factor antagonist [Dietzia cinnamea P4]
 gi|319435704|gb|EFV90919.1| anti-sigma-factor antagonist [Dietzia cinnamea P4]
          Length = 111

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
              V +  G         + + +   ++    +   +VDL +   ID+ G   ++    
Sbjct: 10 GETVVVQPTGRLNMVAAPRLREQLRELVD--GGARRLVVDLGSTEFIDSSGLGALISGLK 67

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84
             +  G +++   +  + ++ +L
Sbjct: 68 AARQAGGDLRIAAPTEQVRRVLTL 91


>gi|300785174|ref|YP_003765465.1| anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299794688|gb|ADJ45063.1| putative anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 141

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/106 (9%), Positives = 32/106 (30%), Gaps = 5/106 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYF 61
           G  + R  G   +    ++   +  +     +    ++DLS +  +D  G   +     +
Sbjct: 34  GAVMVRIRGALDADSAPQVRSAL--STWAHRRFPVLVLDLSEVDFLDGAGLAALGGIQAW 91

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107
             + +  +++      + +     S        ++ P         
Sbjct: 92  AARENATLRVVTGDNRVVRRALSASGLDHALNVSRLPSGWERATEI 137


>gi|256378441|ref|YP_003102101.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255922744|gb|ACU38255.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 127

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 5/79 (6%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--- 61
             V R +G   +     +   ++  ++++  +   +VDL A+T     G  L++     
Sbjct: 15 DAVVVRVSGELDASTTGPLRARLLDEVSRAPSA--LVVDLGAVTFCSAAGLSLLLATTAD 72

Query: 62 MEKYHGKIKLQGVSTHIEQ 80
           E+      + G    + +
Sbjct: 73 AERLGVPWAVVGAQRAVRR 91


>gi|261855377|ref|YP_003262660.1| anti-sigma-factor antagonist [Halothiobacillus neapolitanus c2]
 gi|261835846|gb|ACX95613.1| anti-sigma-factor antagonist [Halothiobacillus neapolitanus c2]
          Length = 117

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 28/78 (35%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R  G+     I  ++D  +   +         + L ++  IDT G   ++ +  +   +
Sbjct: 26  VRVQGDLLRSSIESLSDLSLPMPDGQTPGTRLEIALGSVGRIDTAGVAFLLGWQAEAAAQ 85

Query: 69  IKLQGVSTHIEQLFSLIS 86
                 +   + + +++ 
Sbjct: 86  SVTVRYTHPPKAMRAMMR 103


>gi|300787454|ref|YP_003767745.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299796968|gb|ADJ47343.1| putative anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 152

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G  V    G         + D +  ++  + Q    +VDLS +  ++T G ++++    
Sbjct: 44  SGTLVATVDGEADLCTAPMLHDVLEASLGLTPQ--RIVVDLSLVRFLNTAGVQVLLDAHR 101

Query: 64  KYHGKIKLQGVSTHIEQLFSL 84
           +      L+ V+T    L  L
Sbjct: 102 RATPGTDLRLVATTRATLRPL 122


>gi|299538360|ref|ZP_07051643.1| anti-sigma F factor antagonist [Lysinibacillus fusiformis ZC1]
 gi|298725947|gb|EFI66539.1| anti-sigma F factor antagonist [Lysinibacillus fusiformis ZC1]
          Length = 117

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62
            V R  G      + +I   +  AI       + I +L  ++ +D+ G  L+   M  +
Sbjct: 12 TVVIRLFGELDHHAVEQIRAKISAAIF-QGTVTTIIWNLEGLSFMDSSGVGLVLGRMREL 70

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          E   G+  L   S  + ++F  
Sbjct: 71 EAVAGRTILLNPSPTMRKVFQF 92


>gi|269794835|ref|YP_003314290.1| anti-anti-sigma regulatory factor [Sanguibacter keddieii DSM 10542]
 gi|269097020|gb|ACZ21456.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
           [Sanguibacter keddieii DSM 10542]
          Length = 111

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           + E G +V +  G   S    + +  +  A+++++     ++D S +  ID+ G   ++ 
Sbjct: 14  LEEPGHSVLQMWGEVDSALRPDASGALARALDRNLP---VVIDTSKVDFIDSTGIAFLVQ 70

Query: 61  FM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
                     ++ L      +  + S++        +  
Sbjct: 71  VCTIGRDEGLEVSLVDPPAVVSDVLSMLGVDDLVTHRAP 109


>gi|254823324|ref|ZP_05228325.1| hypothetical protein MintA_25574 [Mycobacterium intracellulare ATCC
           13950]
          Length = 655

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++E G  V   +G+  S   S +   +  A+          +DLSA+T + + G   +  
Sbjct: 555 VTEPGRIVV--SGDVDSNTASTLDRQI--AVESRSGVAPLTIDLSAVTHLGSSGVSALAA 610

Query: 61  FMEKYHGKIKL 71
             E+   +   
Sbjct: 611 ARERAQRQGSE 621


>gi|114566159|ref|YP_753313.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor)-like protein [Syntrophomonas wolfei subsp.
          wolfei str. Goettingen]
 gi|114337094|gb|ABI67942.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor)-like protein [Syntrophomonas wolfei subsp.
          wolfei str. Goettingen]
          Length = 110

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V + +G        ++  ++   I    Q  + +++L  ++ ID+ G  +I+   ++ 
Sbjct: 11 TLVVKISGELDLLVSEKLRREIDSKIQSQ-QVKNLVLNLEKVSFIDSSGLGVIIGRYKRM 69

Query: 66 ---HGKIKLQGVSTHIEQLF 82
             +G++ + G S  +E++ 
Sbjct: 70 NAGNGRMYIVGASPAVEKIL 89


>gi|23014625|ref|ZP_00054432.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of
          anti-sigma factor) [Magnetospirillum magnetotacticum
          MS-1]
          Length = 101

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 28/85 (32%), Gaps = 2/85 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           G  V          + + +   +   +   +   +  VDL  +  +D+ G  +++   +
Sbjct: 9  GGQRVLVLRDQLTDADRAVMETVIPQLLAGGV--KTVCVDLERLDYMDSAGLGMLLTMRD 66

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
          +         +S     +  L++  
Sbjct: 67 RAGKAGVQIRLSKPRGDVKDLLALA 91


>gi|319945234|ref|ZP_08019496.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC
           51599]
 gi|319741804|gb|EFV94229.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC
           51599]
          Length = 418

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 21  SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGV--STHI 78
           +++            +     VD S +T ID IGA+L++     +        +     +
Sbjct: 185 AQVVKQTEQMTRAIQRKRQLRVDFSRVTSIDMIGADLLLRTFRDFRKARHELTICGVEAL 244

Query: 79  EQLFSLISFTHRKKIKNQ 96
           E+  S+++ + R+     
Sbjct: 245 EKALSVMTESGRRDPDEH 262


>gi|309789500|ref|ZP_07684083.1| WecB/TagA/CpsF family glycosyl transferase [Oscillochloris
           trichoides DG6]
 gi|308228466|gb|EFO82111.1| WecB/TagA/CpsF family glycosyl transferase [Oscillochloris
           trichoides DG6]
          Length = 542

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 6/109 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65
               G          AD+    ++ S      I++L+  T +D+    +++       + 
Sbjct: 315 LVLQGRLDIDNQDAFADEANRLLDDSPY---LILNLAEATFLDSSALGVLVALANRAHRA 371

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
            G + L  +   I+ LF L+      ++                     
Sbjct: 372 GGALWLVAIPPQIQSLFKLVRLDTFFEVYPDADAVEVKRRQVPQPVAPQ 420


>gi|253577388|ref|ZP_04854704.1| anti-sigma-B factor antagonist [Paenibacillus sp. oral taxon 786
          str. D14]
 gi|251843188|gb|EES71220.1| anti-sigma-B factor antagonist [Paenibacillus sp. oral taxon 786
          str. D14]
          Length = 112

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IM 59
          ENG+      G       +     V+  +   I     +++L  +  ID+ G  +   I+
Sbjct: 16 ENGVCTVSLRGELDL-SAAPDFRKVMDPL-VGIDDADLVLNLKELKYIDSTGIGIFLSIL 73

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
             +  +    +Q V  HI +LF +
Sbjct: 74 KARQGMNSSFYVQEVPDHIRKLFEM 98


>gi|153003877|ref|YP_001378202.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5]
 gi|152027450|gb|ABS25218.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5]
          Length = 109

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 5/104 (4%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E G TV R +G +     +E+A  +     +   +   ++D S + E   +G   + + 
Sbjct: 11  TEGGRTVIRLSGVFDHASAAELAQRL-----QQEAATEVVLDFSLVREFADLGVAALAHG 65

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           +     ++ ++G+  H  ++F                      +
Sbjct: 66  LAGGRQRLLMRGLRQHQLRIFRYFGVDVEALQSAATSAERVPLH 109


>gi|108804526|ref|YP_644463.1| anti-sigma-factor antagonist [Rubrobacter xylanophilus DSM 9941]
 gi|108765769|gb|ABG04651.1| anti-sigma-factor antagonist [Rubrobacter xylanophilus DSM 9941]
          Length = 125

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSI--QSDSAIVDLSAITEIDTIGAELIM 59
          V + +G  +        + +  A   +   +  + +VD+S +  +D+ G   ++
Sbjct: 20 VVKVSGELELLTAHRFREALEEATASAGDSRPRTVVVDMSNLEFMDSSGVSALL 73


>gi|23016234|ref|ZP_00055992.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of
          anti-sigma factor) [Magnetospirillum magnetotacticum
          MS-1]
          Length = 101

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 30/91 (32%), Gaps = 3/91 (3%)

Query: 3  ENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + G +V     G        +    +       ++      ++S ++ ID++G  L+   
Sbjct: 7  DEGTSVHVSLDGQLNFAANEDFQSLLSQL--GGLKGRKVTFEMSGLSHIDSVGLGLLYIA 64

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           E          ++   + +  ++  T   K
Sbjct: 65 REDLAENGSSINLAHPRDNVLRMLELTEAHK 95


>gi|302556733|ref|ZP_07309075.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302474351|gb|EFL37444.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 113

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++ +G  V    G         +++ V  A          I+DLS +T  D+ G  +++ 
Sbjct: 14  VTPSGPYVLDVVGELDHHTAHFLSEAVNEA---PFDDHGVILDLSGLTYCDSTGITVLIT 70

Query: 61  FMEK---YHGKIKLQGVSTHIEQLFSLISFTH 89
             +K       + L GV+    ++  ++    
Sbjct: 71  AHQKSQAAGSPLVLAGVNPDQMRVLQVVGLDQ 102


>gi|150387861|ref|YP_001317910.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF]
 gi|149947723|gb|ABR46251.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF]
          Length = 105

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E  +   + AG        ++ +  +  I +  + ++  +D   +  ID+ G  +++  +
Sbjct: 12 EENLWTVQLAGEVDIYTAGQLKEAFIKMIEE--RKETIKIDCEELVYIDSTGLGVLIGAL 69

Query: 63 EKYHGKIKLQ---GVSTHIEQLFSL 84
          ++   + K      +   I++L ++
Sbjct: 70 KRLKQEKKEIMLFNIKPSIKKLLNI 94


>gi|302542666|ref|ZP_07295008.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302460284|gb|EFL23377.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653]
          Length = 1001

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/239 (10%), Positives = 67/239 (28%), Gaps = 21/239 (8%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204
              +    + +L   +  + V  +  V+   F T  +        L        ++    
Sbjct: 33  RVGRPSRRVRTLFMTLGVLAVLAMLFVMFAGFWTDWLW----YRSLHYSSVFSTTLRTKI 88

Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264
            L      ++  AV +       +   + +M + ++      MG+   +  +   + AL+
Sbjct: 89  GLFFVFGLLMSAAVGVNIWLAHRLRPPLSAMSMEQQSLDRYRMGIAPFKKWVLLAVTALV 148

Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI-FTGLIKAPFMACA 323
                L   A+ +      ++                       ++ +   + +   A  
Sbjct: 149 ----GLIAGASAAGQWRLWLLWVNSVPFGQKDAEFHKDVAFFAFDLPWYRFLLSFGFAAT 204

Query: 324 I-GIVAM------KEGFAV-GVHSNSLGKKVTT-CVVQSISIVIIIDSLFAIFYFAIGI 373
           +  ++A         G  V    + + G       V   +  V +     A +    G+
Sbjct: 205 VLSLIAAALVHYLYGGLRVTSPGARATGAATGHLSV---LVGVFVALKAVAYWLDRYGL 260


>gi|187778267|ref|ZP_02994740.1| hypothetical protein CLOSPO_01859 [Clostridium sporogenes ATCC
          15579]
 gi|187771892|gb|EDU35694.1| hypothetical protein CLOSPO_01859 [Clostridium sporogenes ATCC
          15579]
          Length = 111

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
             +    G        E+ + +   +++    +  I+D S +  +D+ G  +++   +K
Sbjct: 10 DKLIVTMTGELDHHSAEEVRNIIDDRLDRE-NLNKLILDFSKVNFMDSSGIGVVIGRYKK 68

Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84
              +GK+ L  V   + ++F L
Sbjct: 69 LSLRNGKVCLTNVQEAVRRVFEL 91


>gi|312194216|ref|YP_004014277.1| anti-sigma-factor antagonist [Frankia sp. EuI1c]
 gi|311225552|gb|ADP78407.1| anti-sigma-factor antagonist [Frankia sp. EuI1c]
          Length = 113

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E   TV    G        ++ + ++  ++    S   +VD+  +  +D+ G  +++  +
Sbjct: 10 EGDHTVVVVGGEIDVYTAPKLREQLIDLVSA--GSYHLVVDMEGVEFLDSTGLGVLVGGL 67

Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86
          ++         +    E++  +  
Sbjct: 68 KRVRAHDGSLRLVCTQERILKIFR 91


>gi|256833627|ref|YP_003162354.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603]
 gi|256687158|gb|ACV10051.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603]
          Length = 126

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 3/89 (3%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            V    G      I      V   +     +D  +VD   +  ID+ G  ++      + 
Sbjct: 25  AVIVLRGEIDID-IQSCFARVAEML--HPHTDDIVVDAEGVEFIDSSGIAVLGQIAHNHP 81

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95
           G++ L      +  +  +       ++++
Sbjct: 82  GRVTLLNAPPTMLFILEVTQLIDVIRLES 110


>gi|307327930|ref|ZP_07607112.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu
          4113]
 gi|306886448|gb|EFN17452.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu
          4113]
          Length = 107

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++        ++DL+ +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTALHTAVDA--GGGDLVLDLTELDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+GV   +++L        
Sbjct: 62 RRAGRVGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|290957339|ref|YP_003488521.1| anti-anti-sigma-factor [Streptomyces scabiei 87.22]
 gi|260646865|emb|CBG69962.1| putative anti-anti-sigma-factor [Streptomyces scabiei 87.22]
          Length = 107

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++    +   ++DLS +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTVLHSAVDD--GAGDLVLDLSELDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+ V   +++L        
Sbjct: 62 RRAGRCGRRLVLRAVPPQMQRLLVATRLHR 91


>gi|269796785|ref|YP_003316240.1| anti-anti-sigma regulatory factor [Sanguibacter keddieii DSM
          10542]
 gi|269098970|gb|ACZ23406.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Sanguibacter keddieii DSM 10542]
          Length = 124

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 5/87 (5%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62
           T    AG+    E  +  +     +   ++    ++D+  +T +D+ GA  ++      
Sbjct: 10 TTTLVIAGDLDLAERDQFPEIAARVVG--LRRQLLVIDMCRVTFMDSTGAAFLISLADSG 67

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           K  G   L+G       +  +     
Sbjct: 68 RKRGGATVLRGCDDRDLFVLEVCGALE 94


>gi|268590737|ref|ZP_06124958.1| anti-sigma B factor antagonist [Providencia rettgeri DSM 1131]
 gi|291313509|gb|EFE53962.1| anti-sigma B factor antagonist [Providencia rettgeri DSM 1131]
          Length = 96

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
          T   F G      +    +    ++  +       +D+S +  +D+ G  +++    ++ 
Sbjct: 12 TTLYFNGTLDRDSLMSFWNKKESSLEHTE-----SIDVSGLKHVDSTGLAMLVRLKGEFQ 66

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
           K +   ++   + L +LI  
Sbjct: 67 AKNRSLNITGVSDNLKTLIEL 87


>gi|330501883|ref|YP_004378752.1| anti-sigma-factor antagonist [Pseudomonas mendocina NK-01]
 gi|328916169|gb|AEB57000.1| anti-sigma-factor antagonist [Pseudomonas mendocina NK-01]
          Length = 102

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          ++E      + AG        ++ +     I  S  +    +D +A+ +  ++G  L++ 
Sbjct: 6  ITERSTGQLQLAGVLDYSTGPQLREQGARLIASSSAAR-LSLDCNAVEKSSSVGLALLLA 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
          FM       +   +S   + +  +  
Sbjct: 65 FMRDARKAGRELTISGLPDDMREIAQ 90


>gi|262197621|ref|YP_003268830.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365]
 gi|262080968|gb|ACY16937.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365]
          Length = 114

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +E GI +    G+  +     +   V   + +       I+DL  ++ + + G  +++  
Sbjct: 7  TEQGIDIITLHGHLDTRSSPAVQAAV---LPRVTAKGKMILDLREVSYMSSAGLRVLLSL 63

Query: 62 ME---KYHGKIKLQGVSTHIEQ 80
                  G + L GVS  I  
Sbjct: 64 YRHTSNQQGALVLVGVSEEIRD 85


>gi|302560280|ref|ZP_07312622.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302477898|gb|EFL40991.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 125

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V   AG         + + +   + K       ++D S +   D+ G  +++   
Sbjct: 21  EGPSAVVTPAGELDHHTADLLREPLEDCLAKGY--KRLVIDCSRLEFCDSTGLNVLLGAR 78

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSL 84
              E   G + L G+   + ++F +
Sbjct: 79  LKAEAAGGGVHLAGMQPVVARVFEI 103


>gi|325273314|ref|ZP_08139586.1| toluene-tolerance protein TtgE [Pseudomonas sp. TJI-51]
 gi|324101547|gb|EGB99121.1| toluene-tolerance protein TtgE [Pseudomonas sp. TJI-51]
          Length = 100

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          V   +G        ++      A+  + +    ++D S +    ++G  L++ FM     
Sbjct: 13 VLSLSGVLDYRSGPQLRKQ-GKALITASRDAQLVLDCSGVLRSTSVGLSLLLSFMRDAQA 71

Query: 68 KIKLQGVSTHIEQLFSLIS 86
            K   V    + +  +  
Sbjct: 72 AGKACRVRGMPDDMREIAE 90


>gi|229816422|ref|ZP_04446723.1| hypothetical protein COLINT_03475 [Collinsella intestinalis DSM
          13280]
 gi|229807964|gb|EEP43765.1| hypothetical protein COLINT_03475 [Collinsella intestinalis DSM
          13280]
          Length = 106

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/83 (8%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +    G        ++ + + +A+ +   ++   +D S +  ID+ G  +++    + 
Sbjct: 15 RYLIVVEGEIDISNADKLRNAIDLALEQ--PTERVELDFSQVPYIDSTGIGVLVGAARRA 72

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
            + +   ++     +  +    
Sbjct: 73 SERERALSITGAQPNVLRVAQLL 95


>gi|300789248|ref|YP_003769539.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299798762|gb|ADJ49137.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 123

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            G  V   AG         + D V  A+ ++   D  ++DLS ++ + +IG  +++   
Sbjct: 23 SGGTVVLAVAGEIDLLSAPVLGDGVTTALAEAP--DLLVIDLSEVSFLASIGITVLLEAR 80

Query: 63 EKYHGKIKLQGVSTH 77
           +     +++ V+  
Sbjct: 81 REAGAGTRVRVVAPE 95


>gi|239929823|ref|ZP_04686776.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672]
 gi|291438155|ref|ZP_06577545.1| anti-sigma-B factor antagonist [Streptomyces ghanaensis ATCC
          14672]
 gi|302553081|ref|ZP_07305423.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes
          DSM 40736]
 gi|302559335|ref|ZP_07311677.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor)
          [Streptomyces griseoflavus Tu4000]
 gi|291341050|gb|EFE68006.1| anti-sigma-B factor antagonist [Streptomyces ghanaensis ATCC
          14672]
 gi|302470699|gb|EFL33792.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes
          DSM 40736]
 gi|302476953|gb|EFL40046.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor)
          [Streptomyces griseoflavus Tu4000]
          Length = 113

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             T+ R  G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 11 GDRTIVRVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|317407772|gb|EFV87699.1| hypothetical protein HMPREF0005_03220 [Achromobacter xylosoxidans
           C54]
          Length = 119

 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           +   V    G   S   +E   D++  +     +   I+DLS +  I + G  +++    
Sbjct: 9   DDALVVCPKGQLNSANAAEFEADILARLA--TGAARLILDLSGLDYISSAGLRVVLVAAQ 66

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97
            + +  G + L G+S  + ++F +  F     I+  K
Sbjct: 67  TVREQGGVLILCGLSGAVHEVFEVSGFLDILPIREDK 103


>gi|297201347|ref|ZP_06918744.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197712790|gb|EDY56824.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 113

 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             T+ R  G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 11 GDRTIVRVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|46200828|ref|ZP_00056363.2| COG1366: Anti-anti-sigma regulatory factor (antagonist of
          anti-sigma factor) [Magnetospirillum magnetotacticum
          MS-1]
          Length = 100

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ++     R  G       +++   +      SI++   I DL  +  +D++G  ++    
Sbjct: 8  QDDTLTVRLDGTMDYTVTAQMNGLITDL--NSIKASRVIFDLVKVGRVDSVGLGMLHLAK 65

Query: 63 EK---YHGKIKLQGVSTHIEQLFSL 84
          ++      ++ L+G + ++ +LF L
Sbjct: 66 DEIIGKGRRLTLRGAAGNVRRLFEL 90


>gi|312897532|ref|ZP_07756952.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310621384|gb|EFQ04924.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 364

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 5/117 (4%)

Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220
            ++G     V    S   G     + A  ++Q+GA +++   + +L L      +  +  
Sbjct: 11  EFIGPFLFGVCAFTSVFVGTGTLYRIANLINQYGASMWAAFRILVLAL----PSIIVITF 66

Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277
                   +   G M    EI  +R+ G +    L  P     +      T    F 
Sbjct: 67  PMSVLLGSLMAFGRMSAASEIIVMRSGGQN-FPRLAMPIFITALCISLGTTAFNEFV 122


>gi|144901268|emb|CAM78132.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
          MSR-1]
          Length = 102

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++    +    G       ++  + ++  +  +  S   + DL+ ++ ID++G  L+   
Sbjct: 10 NDGSTALVTLEGQLDF-SANDTFEKLLDTLKSNPPSK-LVFDLTGLSTIDSVGLGLLYIA 67

Query: 62 MEKYHG-KIKLQGVSTHIEQLFSLISFT 88
           E   G  + L+    ++ +L  L    
Sbjct: 68 SEDLSGVPVVLRNPQGYVARLLDLTDAA 95


>gi|83594239|ref|YP_427991.1| anti-sigma-factor antagonist domain-containing protein
          [Rhodospirillum rubrum ATCC 11170]
 gi|83577153|gb|ABC23704.1| Anti-Sigma-factor antagonist (STAS) domain protein
          [Rhodospirillum rubrum ATCC 11170]
          Length = 111

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +   +G         + + ++ A++        +VDL  +  ID+ G   ++  + K  
Sbjct: 13 AILEVSGAVDLRSSPRLREALLRALDS---GRGLVVDLHKVGSIDSSGVSSLLEALIKAR 69

Query: 67 GKIKLQGVSTHIEQLFSLISF 87
                 ++        +I+ 
Sbjct: 70 DTGLDFTLTRVSADAMRVITL 90


>gi|294629740|ref|ZP_06708300.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292833073|gb|EFF91422.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 125

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           E    V   AG         + + +   + K       +VD S +   D+ G  +++   
Sbjct: 21  EGSSAVVTPAGELDHHTADLLREPLEECLEK--GRSRLVVDCSRLEFCDSTGLNVLLGAR 78

Query: 63  ---EKYHGKIKLQGVSTHIEQLFSL 84
              E   G + L G+   + ++F +
Sbjct: 79  LKAEAAGGGVHLAGMLPVVARVFEI 103


>gi|92113597|ref|YP_573525.1| anti-sigma-factor antagonist domain-containing protein
           [Chromohalobacter salexigens DSM 3043]
 gi|91796687|gb|ABE58826.1| anti-sigma-factor antagonist (STAS) domain protein
           [Chromohalobacter salexigens DSM 3043]
          Length = 171

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/114 (8%), Positives = 34/114 (29%), Gaps = 5/114 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-- 62
           G+ V + +G+ +   +    D     +  S    + ++DL   T +D+     +      
Sbjct: 13  GVFVLKLSGDVRL-TLCATLDQQAQRVADSPGLAAVMIDLREATNVDSTALGFLAKVAMA 71

Query: 63  --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114
              +      +      + ++  ++ F+    + +              +    
Sbjct: 72  VEGRLEQPPTIVAEHPDVRRMLDVMGFSRYFTLLDAPLTEPASLRELPQVRADE 125


>gi|194336122|ref|YP_002017916.1| anti-sigma-factor antagonist [Pelodictyon phaeoclathratiforme
          BU-1]
 gi|194308599|gb|ACF43299.1| anti-sigma-factor antagonist [Pelodictyon phaeoclathratiforme
          BU-1]
          Length = 107

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 26/84 (30%), Gaps = 4/84 (4%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          V    G   +     +       +       S ++DL  +  +D+ G   ++    K   
Sbjct: 13 VLSLRGMLNASSAPALKT----CVAGFPDEQSIVIDLENVDFLDSSGLGALVGIARKKKA 68

Query: 68 KIKLQGVSTHIEQLFSLISFTHRK 91
             +  ++   E++  +   T   
Sbjct: 69 SKAIMKLARMNERVKKVFEITQAH 92


>gi|303248696|ref|ZP_07334950.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
 gi|302489952|gb|EFL49878.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ]
          Length = 113

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
              + R+ G        ++   +   ++ +    + ++DLS +T +D+ G   ++    
Sbjct: 10 GNALMLRYVGEITLEITGDLKRRLDAELDGNSVG-TVVIDLSDVTFMDSSGIGFLVSVNT 68

Query: 64 KYHGKIK 70
          +     +
Sbjct: 69 RMRSAGR 75


>gi|240170863|ref|ZP_04749522.1| regulator of sigma subunit, anti-anti-sigma factor RsbU
           [Mycobacterium kansasii ATCC 12478]
          Length = 653

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           ++E G  + R  G+  +   + +   +  A+       S  +DLSA+T + + G   ++ 
Sbjct: 553 VAEPGRIIVR--GDVDANAATTLDSQI--AVESRSGLASLTIDLSAVTHLGSAGVAALVA 608

Query: 61  FMEKYHGKIKLQGV 74
             ++   +     +
Sbjct: 609 ARDRARKQGADCAL 622


>gi|86606745|ref|YP_475508.1| anti-anti-sigma factor [Synechococcus sp. JA-3-3Ab]
 gi|86555287|gb|ABD00245.1| anti-anti-sigma factor [Synechococcus sp. JA-3-3Ab]
          Length = 124

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +    G + +   SE+   +   ++      + ++D+SA+T +D+ G  +++  + K  
Sbjct: 19 AIVPLEGRFDAKAASEVRQLLQQVLD--FGYHNLLIDMSAVTFMDSSGLGVLISALRKCR 76

Query: 67 GKI 69
             
Sbjct: 77 AAG 79


>gi|331698015|ref|YP_004334254.1| sulfate transporter/antisigma-factor antagonist STAS
           [Pseudonocardia dioxanivorans CB1190]
 gi|326952704|gb|AEA26401.1| Sulfate transporter/antisigma-factor antagonist STAS
           [Pseudonocardia dioxanivorans CB1190]
          Length = 123

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V    G         +  +V+ A+   ++  + ++DLSA T + ++G   ++     
Sbjct: 24  GGVVLVVTGPLDLSLAPRLRREVLRAVR--LRPATLVIDLSASTFLASVGMAELVRAHRT 81

Query: 65  YHGKIKLQGVSTHIEQLFSL 84
               + ++ V+     L  L
Sbjct: 82  AGAGVTVRIVAAGPLLLRPL 101


>gi|229149311|ref|ZP_04277548.1| Anti-sigma factor antagonist [Bacillus cereus m1550]
 gi|228634125|gb|EEK90717.1| Anti-sigma factor antagonist [Bacillus cereus m1550]
          Length = 112

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++     S +    +VD   +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVQIVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|196233315|ref|ZP_03132160.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
 gi|196222620|gb|EDY17145.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428]
          Length = 108

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65
          +    G        ++ + +   +++ +     +VD S +T ID+ G   ++  +++   
Sbjct: 11 ILALEGEIDLHRSPQVKETLEPLVSQKV--PRILVDFSQVTYIDSSGLATMIETLQRIQS 68

Query: 66 -HGKIKLQGVSTHIEQLFSLISFTH 89
            GK  + G+   +  +F +     
Sbjct: 69 YGGKFAMFGLRDSVRNIFEIARLDQ 93


>gi|324325027|gb|ADY20287.1| anti-sigma B factor antagonist (RsbV) [Bacillus thuringiensis
          serovar finitimus YBT-020]
          Length = 111

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 8  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--MVVDFTEVEYMDSTGLGVFIA 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97


>gi|148242429|ref|YP_001227586.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
           [Synechococcus sp. RCC307]
 gi|147850739|emb|CAK28233.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
           [Synechococcus sp. RCC307]
          Length = 138

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMY 60
           ++   +F F G   +             I  +  S     ++DLS I  ID+ G   ++ 
Sbjct: 34  QDQCLLFHFTGQLDAYS----ERQFRDFIGDNAPSGLKPLVIDLSKIDFIDSSGLGALVQ 89

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
             ++++ + K + +     ++   +     +   N +P       +   
Sbjct: 90  LAKQWN-EGKRRFLIVGNSRVVQTVKLVRLEAFLNLQPDLPTALGNIAA 137


>gi|313202373|ref|YP_004041031.1| anti-sigma-factor antagonist [Methylovorus sp. MP688]
 gi|312441689|gb|ADQ85795.1| anti-sigma-factor antagonist [Methylovorus sp. MP688]
          Length = 96

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G     E +E    +   +    Q  +  +DL+ +TEIDT G +L++    +   
Sbjct: 3  HVVIEGEMTIFEAAEYHAAL---LPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQ 59

Query: 68 KIKLQGVSTHIEQLFSLISFTH 89
                ++ H E +  ++  T 
Sbjct: 60 TGSTLSITGHSETVQQVLDATD 81


>gi|312876649|ref|ZP_07736630.1| anti-sigma-factor antagonist [Caldicellulosiruptor lactoaceticus
          6A]
 gi|311796602|gb|EFR12950.1| anti-sigma-factor antagonist [Caldicellulosiruptor lactoaceticus
          6A]
          Length = 102

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +SENG+ V    G         + D +   I+ S  S   IVD++ ++ ID+ G  + + 
Sbjct: 9  ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIVDMNDVSYIDSTGLGVFVG 65

Query: 61 FMEKYHGKI 69
           ++K   K 
Sbjct: 66 ALKKSKQKG 74


>gi|152981529|ref|YP_001352333.1| teichoic acid biosynthesis protein [Janthinobacterium sp.
           Marseille]
 gi|151281606|gb|ABR90016.1| teichoic acid biosynthesis protein [Janthinobacterium sp.
           Marseille]
          Length = 396

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 6/93 (6%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63
                 G W+   +  +      A   +       +D S +T ID+    L+M       
Sbjct: 301 CTITAGGAWEESNLQPMRKAFSDA---TAMPGDIRIDFSGVTHIDSACIALLMLLYGHQT 357

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
           K      L GV   + +  +L    +  +I+  
Sbjct: 358 KVQRDFFLYGVHADVLRTLNLFCADYLVRIEQP 390


>gi|182437100|ref|YP_001824819.1| putative anti-sigma factor antagonist [Streptomyces griseus
          subsp. griseus NBRC 13350]
 gi|178465616|dbj|BAG20136.1| putative anti-sigma factor antagonist [Streptomyces griseus
          subsp. griseus NBRC 13350]
          Length = 117

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 72

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95


>gi|328883366|emb|CCA56605.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor
          antagonist RsbV [Streptomyces venezuelae ATCC 10712]
          Length = 117

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +    TV    G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  
Sbjct: 13 AGGDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGG 70

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
          +++         +  + E++  +  
Sbjct: 71 LKRVRAHEGSLRLVCNQERILKIFR 95


>gi|300309956|ref|YP_003774048.1| anti-sigma-factor antagonist (STAS) domain-containing protein
          [Herbaspirillum seropedicae SmR1]
 gi|300072741|gb|ADJ62140.1| anti-sigma-factor antagonist (STAS) domain protein
          [Herbaspirillum seropedicae SmR1]
          Length = 102

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 34/90 (37%), Gaps = 2/90 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          +    + + +G     + +E   +++  +  ++      +DL+ + EIDT G +L++   
Sbjct: 8  QEDKLLLQVSGGLTIFQAAERKPELLHVL--TLAQPQVQLDLAGVDEIDTAGIQLLLLLR 65

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92
           +   + +   +      L          +
Sbjct: 66 RELRAQGRSLDIVGASPALLVAFDLLQLHE 95


>gi|294629920|ref|ZP_06708480.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292833253|gb|EFF91602.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 122

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
          + G +V    G         +   V   + +       ++DLS +   D+ G  +++   
Sbjct: 10 QGGWSVLHVVGELDLVTSPVLRQRVHDVVAQ--GRHDLVLDLSEVFFCDSSGVGVLIAAR 67

Query: 60 YFMEKYHGKIKLQGVSTHIEQ 80
            +    G+++L   +   E+
Sbjct: 68 RLIRSCQGRLRLLLPAGGAEE 88


>gi|152976484|ref|YP_001376001.1| anti-sigma-factor antagonist [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025236|gb|ABS23006.1| anti-sigma-factor antagonist [Bacillus cytotoxicus NVH 391-98]
          Length = 116

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
            +   R AG        E+   V   I         +++L  ++ +D+ G  +I+     
Sbjct: 12  DVLCVRLAGELDHHTAEELRARVTDKIETH-NVHHIVLNLEELSFMDSSGLGVILGRYKH 70

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++   G++ +  +S  +++LF +       +++  +  
Sbjct: 71  VKSLGGEMVVCAISPSVKRLFEMSGLFKIVRLEESEAH 108


>gi|222094728|ref|YP_002528788.1| anti-sigma b factor antagonist (rsbv) [Bacillus cereus Q1]
 gi|221238786|gb|ACM11496.1| anti-sigma B factor antagonist (RsbV) [Bacillus cereus Q1]
          Length = 111

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++    +       +VD + +  +D+ G  + + 
Sbjct: 8  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIAGEKEVY--IVVDFTEVEYMDSTGLGVFIA 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K +GK++  GVS  +++LF +   T 
Sbjct: 66 LLKAVKKNNGKLEFIGVSKRLKRLFDITGLTE 97


>gi|29829411|ref|NP_824045.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29606518|dbj|BAC70580.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
          MA-4680]
          Length = 107

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++  +     I+DLS +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTVLHSAVDDGV--GDLILDLSELDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+ V   +++L        
Sbjct: 62 RRAGRCGRRLVLRDVPPQMQRLLVATRLHR 91


>gi|88808426|ref|ZP_01123936.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp. WH
          7805]
 gi|88787414|gb|EAR18571.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp. WH
          7805]
          Length = 129

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           G  VF F G   +    +    V   +  +  + S ++DLS I  +D+ G   ++   +
Sbjct: 27 GGCLVFHFTGQLDAFSEKQFLSYVADVLKAN--ASSTVLDLSKIDFLDSSGLGALVQLAK 84

Query: 64 KYHGKIK 70
          + +   +
Sbjct: 85 QCNDSKR 91


>gi|288555623|ref|YP_003427558.1| anti-sigmaB factor antagonist [Bacillus pseudofirmus OF4]
 gi|288546783|gb|ADC50666.1| anti-sigmaB factor antagonist [Bacillus pseudofirmus OF4]
          Length = 103

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           +  G+        I ++++ A+   +Q  + I++   +  ID+ G  L++  ++  + +
Sbjct: 15 VKLIGDLDIDSTELIEEELLPAL---MQHQTIIINFEEVPFIDSSGIGLLLSTIQTLNEQ 71

Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93
               +S    ++  +       +I
Sbjct: 72 QIALTISKVRTEVMDIFEMLQIPEI 96


>gi|144898325|emb|CAM75189.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Magnetospirillum gryphiswaldense MSR-1]
          Length = 108

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
          +G  V   +G         +   ++  + +       +VD++++  ID+ G   ++    
Sbjct: 9  DGAVVVALSGEVDLQHSPSVRKHLMDLMFER---RPVVVDMASVDYIDSSGIASLVEAYQ 65

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87
             K   +  L  +S    ++  L   
Sbjct: 66 MARKNGTRFILAAISAPAMRVLQLARL 92


>gi|302555832|ref|ZP_07308174.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes DSM
           40736]
 gi|302473450|gb|EFL36543.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes DSM
           40736]
          Length = 127

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 30/95 (31%), Gaps = 2/95 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +G+ V    G        +      +    +      + DLS +T +D+ G  + +   +
Sbjct: 27  SGVRVVTLRGE--IDHDVQDVLSQALLAENTTVPLRMVADLSGVTFMDSSGINVFVAAYQ 84

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
           +         ++   E +  ++       +    P
Sbjct: 85  QASDTGGWVRIAGAQESVLRVLQLVGVDTLIPCHP 119


>gi|295836475|ref|ZP_06823408.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197699030|gb|EDY45963.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 100

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
               +     G       ++    +  A++    +   ++DLS +   D  G  +IM   
Sbjct: 4   RGDHSELVVGGRLDVRSAADARSILHTAVDD--GAGDLVLDLSELDSWDATGLGVIMGAH 61

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
               +   ++ L+ V   +++L           I+   P
Sbjct: 62  RRAGRCGRRLVLRAVPAQMQRLLVATRLHRILAIEAVAP 100


>gi|323138390|ref|ZP_08073460.1| anti-sigma-factor antagonist [Methylocystis sp. ATCC 49242]
 gi|322396337|gb|EFX98868.1| anti-sigma-factor antagonist [Methylocystis sp. ATCC 49242]
          Length = 114

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 3   ENGITVFRFAGN-WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           + G TV     +   +   SE+ + ++  +   +   + I+DL  +  ID+ G   ++  
Sbjct: 8   QGGRTVLSVQEDRLDAHNSSELKERILKILEAGVH--NLIIDLGQVQFIDSSGLGALLSG 65

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
            +    +     +     ++ S+   T   ++ +  P 
Sbjct: 66  YKNASLRSSAFALVGLQPRVRSMFELTRLHRVFDIYPD 103


>gi|310826429|ref|YP_003958786.1| possible anti-sigma B factor antagonist [Eubacterium limosum
          KIST612]
 gi|308738163|gb|ADO35823.1| possible anti-sigma B factor antagonist [Eubacterium limosum
          KIST612]
          Length = 103

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          ENG    R  G       ++  + +   I  + +     +DL+ ++ ID+ G  +++   
Sbjct: 8  ENGREGVRVTGEVDIYTATQFKEPIEKLIEANTKD--IFLDLTDLSYIDSTGIGILIELR 65

Query: 63 E 63
          +
Sbjct: 66 K 66


>gi|302868154|ref|YP_003836791.1| sulfate transporter/antisigma-factor antagonist STAS
          [Micromonospora aurantiaca ATCC 27029]
 gi|315505449|ref|YP_004084336.1| sulfate transporter/antisigma-factor antagonist stas
          [Micromonospora sp. L5]
 gi|302571013|gb|ADL47215.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Micromonospora aurantiaca ATCC 27029]
 gi|315412068|gb|ADU10185.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Micromonospora sp. L5]
          Length = 99

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
          S +G+ V    G       S  AD +  A+      +  +VDL+ +  +D+ G   +
Sbjct: 12 SPDGVRVLAAVGEIDMSNASAFADALAEAVR--PDGEPLVVDLTKVEYLDSAGLAAL 66


>gi|256391115|ref|YP_003112679.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
 gi|256357341|gb|ACU70838.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928]
          Length = 127

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 26/88 (29%), Gaps = 3/88 (3%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                 AG+        +   +   +         +VD S +  +D++G   ++    K 
Sbjct: 31  AVTVTVAGDVDLAAADTLWSVLDEYVRS---GAQVVVDCSRVAFLDSMGLRTLIRAQHKA 87

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKI 93
                   ++   E +  ++       +
Sbjct: 88  KASGARLTLAAPSEAVLRVLQLAGVADL 115


>gi|3287907|sp|O32723|SP2AA_BACSH RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage
          II sporulation protein AA
 gi|2529269|gb|AAB81189.1| SpoIIAA [Lysinibacillus sphaericus]
          Length = 117

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62
            V R  G      + +I   +  AI       + I +L  ++ +D+ G  L+   M  +
Sbjct: 12 TVVIRLFGELDHHAVEQIRAKISAAIF-QGTVTTIIWNLEGLSFMDSSGVGLVLGRMREL 70

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          E   G+  L   S  + ++F  
Sbjct: 71 EAVAGRTILLNPSPTMRKVFQF 92


>gi|330899431|gb|EGH30850.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. japonica str. M301072PT]
          Length = 115

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 5/87 (5%)

Query: 1  MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +S++G   +    G +              A  +  QS + +VDL     +D+    +++
Sbjct: 7  LSDDGRTLILEIEGRFDFNS----HQAFRAAYEEHPQSLNYVVDLRGTHYLDSSALGMLL 62

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLIS 86
             +   G   L  +      +  +++
Sbjct: 63 LLRDHAGGDKALVRLVNCTPDVLKILA 89


>gi|300870194|ref|YP_003785065.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000]
 gi|300687893|gb|ADK30564.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000]
          Length = 111

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          EN  +V +  G+      S++ D +   I+    +   I+D+  +  ID+ G  + ++ +
Sbjct: 9  ENNTSVIKLVGDIDVYTSSDLKDAINSQID--FGAKRIIIDMEDVYYIDSSGIGVFVFAI 66

Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84
             ++ +GKI +  ++ ++ ++F L
Sbjct: 67 GSFKRVNGKIGIVKITENVRKVFEL 91


>gi|302518643|ref|ZP_07270985.1| anti-sigma factor [Streptomyces sp. SPB78]
 gi|302427538|gb|EFK99353.1| anti-sigma factor [Streptomyces sp. SPB78]
          Length = 125

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R +G      +  + +++  A  +       I+DLS +   D+     ++    +   
Sbjct: 34  LVRASGELDLDTVGALREELEEAAARYP---VVILDLSLVDFGDSSFLNFLIRV--RATT 88

Query: 68  KIKLQGVSTHIEQLFSL 84
           +++L   +  + QLF+L
Sbjct: 89  RLRLVAPTEPLRQLFAL 105


>gi|240172555|ref|ZP_04751214.1| anti-anti-sigma regulatory factor [Mycobacterium kansasii ATCC
          12478]
          Length = 122

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G+ V    G         + + +   +  +  +   I+DLS +  + ++G +++    E
Sbjct: 15 DGVAVLSIGGEIDLVTAPALEEAIGGVVADNPSA--LIIDLSGVEFLGSVGLKILAATYE 72

Query: 64 KYHGKIKLQGVSTHIEQLFSL 84
          K     +   V+        +
Sbjct: 73 KLGSAAQFGVVARGPATRRPI 93


>gi|291298031|ref|YP_003509309.1| anti-sigma-factor antagonist [Stackebrandtia nassauensis DSM
          44728]
 gi|290567251|gb|ADD40216.1| anti-sigma-factor antagonist [Stackebrandtia nassauensis DSM
          44728]
          Length = 109

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++   TV    G       +E+ + +   + K++      +D++ +   D+ G  +I+  
Sbjct: 9  TDGEYTVVAVGGEIDMFTATELREALHAELAKNVS--RLAIDVNGVEFCDSTGLGVIIGV 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88
          + +         +    +Q+  +   T
Sbjct: 67 LRRLRESGGKLVIVCARQQMLKIFQLT 93


>gi|124268280|ref|YP_001022284.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
 gi|124261055|gb|ABM96049.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
          Length = 93

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 15 WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEID-TIGAELIM--YFMEKYHGKIKL 71
              E  +    + +++ +  +    ++D S +   D T  A L+      + +  + +L
Sbjct: 8  LTLNEARDTLRLLKVSLEREAE-PLLVIDGSQLQRFDSTALAVLLECRRLAQAWGKRFEL 66

Query: 72 QGVSTHIEQLFSLISFTH 89
            V   + +L  L     
Sbjct: 67 TAVPEKLSELSRLYGIDD 84


>gi|289665356|ref|ZP_06486937.1| anti-sigma factor antagonist [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 139

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 37/104 (35%), Gaps = 5/104 (4%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
               G   +    ++   +   ++  I   + ++DLSA+  I + G   I    +     
Sbjct: 18  VILTGRLSTHTHQDLDAALSPLLDTRIT--TLVLDLSALEYISSAGIRCIFKARKALATR 75

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           HGK+ +      I ++F ++       +     +   +  + + 
Sbjct: 76  HGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLEAMQR 119


>gi|302521959|ref|ZP_07274301.1| anti-sigma factor [Streptomyces sp. SPB78]
 gi|318059407|ref|ZP_07978130.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actG]
 gi|318080988|ref|ZP_07988320.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actF]
 gi|302430854|gb|EFL02670.1| anti-sigma factor [Streptomyces sp. SPB78]
          Length = 100

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
               +     G       ++    +  A++  +     ++DLS +   D  G  +IM   
Sbjct: 4   RGDHSELVVGGRLDVRSAADARSILHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61

Query: 60  YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98
               +   ++ L+ V   +++L           I+   P
Sbjct: 62  RRAGRCGRRLVLRAVPAQMQRLLVATRLHRILAIEAVAP 100


>gi|284992224|ref|YP_003410778.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM
          43160]
 gi|284065469|gb|ADB76407.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM
          43160]
          Length = 121

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 2/81 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +   +G   S     + + V  A    + +    VDL  +T +D+ G  ++     + 
Sbjct: 21 GVLLTVSGEVDSSTAPRLREVVDAAFADRVPA--LTVDLDGVTFLDSAGLCVLAGAHRRA 78

Query: 66 HGKIKLQGVSTHIEQLFSLIS 86
               L  V      +   + 
Sbjct: 79 AEGGVLLRVVASSRAVIRPLQ 99


>gi|218885341|ref|YP_002434662.1| chemotaxis protein CheA [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756295|gb|ACL07194.1| putative CheA signal transduction histidine kinase [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 669

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 29/87 (33%), Gaps = 4/87 (4%)

Query: 2   SENGIT-VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
           S+ G   V   +G       +++ + ++  +          +DLS +T  D    +L+  
Sbjct: 563 SQGGAKGVLVLSGEVTIERGADLREALLDVLGSFAT---VRIDLSGVTAADLTLVQLLQS 619

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISF 87
                  +      +  + +  +  + 
Sbjct: 620 AAVTARARGVDLAATGLVSEAVAEAAR 646


>gi|297582859|ref|YP_003698639.1| anti-sigma-factor antagonist [Bacillus selenitireducens MLS10]
 gi|297141316|gb|ADH98073.1| anti-sigma-factor antagonist [Bacillus selenitireducens MLS10]
          Length = 109

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 5/97 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEK 64
           V   +G       S++ + +     +  ++    VDLS +  ID+ G  + +      EK
Sbjct: 15  VAYVSGEVDVYTASKLKETLNPLAEQ--ENKDLYVDLSNVEYIDSTGLGIFIGTLKLTEK 72

Query: 65  YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
               +KL+G++  + +LF +       +I   K + +
Sbjct: 73  SGSNLKLRGLNDRVLRLFEITGLNEVIEIDADKREEA 109


>gi|30261114|ref|NP_843491.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Ames]
 gi|47526269|ref|YP_017618.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          'Ames Ancestor']
 gi|49183948|ref|YP_027200.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Sterne]
 gi|254682829|ref|ZP_05146690.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          CNEVA-9066]
 gi|254725615|ref|ZP_05187397.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A1055]
 gi|254734241|ref|ZP_05191954.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Western North America USA6153]
 gi|254740110|ref|ZP_05197802.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Kruger B]
 gi|254753451|ref|ZP_05205487.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Vollum]
 gi|254758548|ref|ZP_05210575.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Australia 94]
 gi|8670943|emb|CAB95032.1| rsbV [Bacillus anthracis]
 gi|30254728|gb|AAP24977.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Ames]
 gi|47501417|gb|AAT30093.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          'Ames Ancestor']
 gi|49177875|gb|AAT53251.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          Sterne]
          Length = 111

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++     S +    +VD + +  +D+ G  + + 
Sbjct: 8  LQNDVGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVRIVVDFNKVDYMDSTGLGVFIA 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97


>gi|296126997|ref|YP_003634249.1| anti-sigma-factor antagonist [Brachyspira murdochii DSM 12563]
 gi|296018813|gb|ADG72050.1| anti-sigma-factor antagonist [Brachyspira murdochii DSM 12563]
          Length = 111

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          EN   V +  G+      S++ D +   I   + +   I+D+  +  ID+ G  + +  +
Sbjct: 9  ENNTAVLKLDGDIDVYTSSDLKDVIFSQIE--LGAKKIIIDMEDVYYIDSSGIGVFISAL 66

Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84
             +K +GKI    V+  ++++F L
Sbjct: 67 GAFKKVNGKICFVKVTEPVKKVFEL 91


>gi|221195870|ref|ZP_03568923.1| anti-anti-sigma factor family protein [Atopobium rimae ATCC 49626]
 gi|221184344|gb|EEE16738.1| anti-anti-sigma factor family protein [Atopobium rimae ATCC 49626]
          Length = 243

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 38/108 (35%), Gaps = 2/108 (1%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           I V   + +     +  +  +V   + +       I++++ ++ +D+ G   IM  + + 
Sbjct: 7   IVVLSLSSDLDVTTVPAVRREVESLLKQGCL--RIILNMADVSYVDSAGMSFIMCALRRI 64

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113
                L  ++   + +F  +S              +  + +  +   H
Sbjct: 65  CAMGGLMSLTNVSQPVFRGLSRMRLVDFMPVARVGAREHIAPLDPRVH 112


>gi|239943097|ref|ZP_04695034.1| putative anti-sigma factor antagonist [Streptomyces roseosporus
          NRRL 15998]
 gi|282863643|ref|ZP_06272701.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|291446574|ref|ZP_06585964.1| BldG [Streptomyces roseosporus NRRL 15998]
 gi|297193028|ref|ZP_06910426.1| anti-sigma-B factor antagonist [Streptomyces pristinaespiralis
          ATCC 25486]
 gi|326777715|ref|ZP_08236980.1| anti-sigma-factor antagonist [Streptomyces cf. griseus XylebKG-1]
 gi|197719842|gb|EDY63750.1| anti-sigma-B factor antagonist [Streptomyces pristinaespiralis
          ATCC 25486]
 gi|282561344|gb|EFB66888.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|291349521|gb|EFE76425.1| BldG [Streptomyces roseosporus NRRL 15998]
 gi|320009998|gb|ADW04848.1| anti-sigma-factor antagonist [Streptomyces flavogriseus ATCC
          33331]
 gi|326658048|gb|EGE42894.1| anti-sigma-factor antagonist [Streptomyces cf. griseus XylebKG-1]
          Length = 117

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 72

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95


>gi|167520576|ref|XP_001744627.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776958|gb|EDQ90576.1| predicted protein [Monosiga brevicollis MX1]
          Length = 913

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367
           F    ++      I   A        +   ++   +T+ VV +   +I+ D LF+  
Sbjct: 853 FVLFYRSLTFTAIIMGCAEWRARRPSLQPRNVASAITSAVVSAGVAIIVADGLFSQI 909


>gi|162453095|ref|YP_001615462.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
 gi|161163677|emb|CAN94982.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
          Length = 390

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 4/89 (4%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G       G   +   SE+ + ++ AI    ++   ++D++    +D  GA  +      
Sbjct: 277 GTLAVPLIGRLDAERGSELGERLLPAIVAQ-RASHVVLDVTGAEALDPDGAAALERLAHA 335

Query: 65  ---YHGKIKLQGVSTHIEQLFSLISFTHR 90
                 +  L GV   + +    +     
Sbjct: 336 IQLLGSRPILTGVRPEVARALVDVDLGDE 364


>gi|86160180|ref|YP_466965.1| anti-sigma-factor antagonist domain-containing protein
          [Anaeromyxobacter dehalogenans 2CP-C]
 gi|197124207|ref|YP_002136158.1| sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter sp. K]
 gi|220918987|ref|YP_002494291.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter dehalogenans 2CP-1]
 gi|85776691|gb|ABC83528.1| anti-sigma-factor antagonist (STAS) domain protein
          [Anaeromyxobacter dehalogenans 2CP-C]
 gi|196174056|gb|ACG75029.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter sp. K]
 gi|219956841|gb|ACL67225.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 100

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58
          +++ +TV R  G     E+S IA     A     +    +VDL  +T +   GA L+
Sbjct: 6  NQDEVTVIRCVGELTRDELSAIAGLAQRA---RHEGRMVVVDLKRVTHLHYAGAALL 59


>gi|289678981|ref|ZP_06499871.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae FF5]
 gi|330940711|gb|EGH43719.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. pisi str. 1704B]
 gi|330976002|gb|EGH76068.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. aptata str. DSM 50252]
          Length = 115

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 5/87 (5%)

Query: 1  MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59
          +S++G   +    G +              A     QS + +VDL     +D+    +++
Sbjct: 7  LSDDGRTLILEIEGRFDFNS----HQAFRAAYEDHPQSLNYVVDLRGTHYLDSSALGMLL 62

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLIS 86
             +   G   L  +      +  +++
Sbjct: 63 LLRDHAGGDKALVRLVNCTPDVLKILA 89


>gi|288941811|ref|YP_003444051.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180]
 gi|288897183|gb|ADC63019.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180]
          Length = 113

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++GI V + +G   +   ++    V   + +   +   ++D   +  I + G   ++   
Sbjct: 8   QDGIHVLKVSGQLDALSGADYEQGVNRLVAE--GARRLVLDFGPLVYISSAGLRALLNTS 65

Query: 63  E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           +      G +    +   + ++F +       K+ +  P+
Sbjct: 66  KPLMAQGGALVYVNLQPSVREVFEMTGLLSLFKVCDSLPE 105


>gi|294814899|ref|ZP_06773542.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327498|gb|EFG09141.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 986

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 18/155 (11%)

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           + TAV +       +   + +M + ++      MG+   +      I AL+     L   
Sbjct: 80  MATAVGVNIWLAHRLRPPLSAMSLEQQSLDRYRMGIAPYKKWALLAITALV----GLIAG 135

Query: 274 ANFSA---IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI-GIVAM 329
           A+ +         I    + +               L   +   +     A  +  ++A 
Sbjct: 136 ASATGQWRTWLMWIHGVPFGEKDPQFKLDVSFYAFDLP--WYRFLLGFGFAAVVLSLIAA 193

Query: 330 ------KEGFA-VGVHSNSLGKKVTT-CVVQSISI 356
                   G       + + G       V+  I +
Sbjct: 194 ALTHYLYGGLRITSPGARATGAATGHLSVLLGIFV 228


>gi|239981529|ref|ZP_04704053.1| anti-sigma factor antagonist [Streptomyces albus J1074]
          Length = 120

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 5/72 (6%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           G  V   AG         +   V   + K       ++DLS +   D+ G  +++    
Sbjct: 7  GGWAVLHVAGELDLVSSPVVRQRVHDVVAK--GRHELVLDLSDVLFCDSSGVGVLIATRR 64

Query: 61 FMEKYHGKIKLQ 72
           +    G ++L 
Sbjct: 65 LIRSCQGSLRLI 76


>gi|307154202|ref|YP_003889586.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
 gi|306984430|gb|ADN16311.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822]
          Length = 118

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           I     AG   +  ISE  +++ +++  S      ++D++ +  +D+ G   +       
Sbjct: 10  IITIEPAGYITAANISEFQEELTLSL-TSGDHSVFLIDMTKVEFLDSAGLMALASAFRLA 68

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100
           EK   +  L  +   ++ +F L        I   +   
Sbjct: 69  EKLGKRFSLCSIPPSVKIIFELTQLDRVLDIYESREAF 106


>gi|239981069|ref|ZP_04703593.1| anti-sigma factor antagonist [Streptomyces albus J1074]
 gi|291452935|ref|ZP_06592325.1| anti-sigma factor antagonist [Streptomyces albus J1074]
 gi|291355884|gb|EFE82786.1| anti-sigma factor antagonist [Streptomyces albus J1074]
          Length = 113

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +  TV    G        ++ + +V  +N    +   +VD+  +  +D+ G  +++  ++
Sbjct: 11 DDRTVVEVGGEIDVYTAPKLREQLVELVND--GNFHLVVDMENVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|239908192|ref|YP_002954933.1| anti-sigma factor antagonist family protein [Desulfovibrio
           magneticus RS-1]
 gi|239798058|dbj|BAH77047.1| anti-sigma factor antagonist family protein [Desulfovibrio
           magneticus RS-1]
          Length = 108

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 4/101 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           +   V R +G      ++E   +V      +      +  LSA+  +D+ G   ++    
Sbjct: 9   DAALVVRVSGEIIMDAVTECRAEVEHLALAAAAPAVVVD-LSAVAFMDSSGVGFLIGLRR 67

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101
             + +   + L   +  I++L +++  T         P  +
Sbjct: 68  LCQDHGKTLSLANPTPPIKKLLAMLRLTDYFDAPPTGPAGA 108


>gi|225621091|ref|YP_002722349.1| anti-sigma factor antagonist [Brachyspira hyodysenteriae WA1]
 gi|225215911|gb|ACN84645.1| anti-sigma factor antagonist [Brachyspira hyodysenteriae WA1]
          Length = 111

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          EN   + +  G+      S++ D +   I   + +   I+D+  +  ID+ G  + +  +
Sbjct: 9  ENNTVILKLDGDIDVYTSSDLKDSIFSQIE--LGAKKIIIDMEDVYYIDSSGIGVFISAL 66

Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84
             +K +GKI    V+  ++++F L
Sbjct: 67 GTFKKVNGKICFVKVTDPVKKVFEL 91


>gi|222151974|ref|YP_002561134.1| anti-sigma B factor antagonist [Macrococcus caseolyticus JCSC5402]
 gi|222121103|dbj|BAH18438.1| anti-sigma B factor antagonist [Macrococcus caseolyticus JCSC5402]
          Length = 107

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
              AG      + E+ + +V    +        +D   +T +D+ G  L +  +++ +  
Sbjct: 16  INVAGELDVATVPELEEVLVPIRLQGTHDIHLRID--EVTYMDSTGLGLFVGTLKELNKN 73

Query: 69  IKL---QGVSTHIEQLFSLISFTHRKKIKNQKP 98
            K     GV+  IE+LF +        +     
Sbjct: 74  NKELYVLGVNKRIERLFDITGLKDLMHVNQPVE 106


>gi|228984183|ref|ZP_04144365.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|228775470|gb|EEM23854.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
          Length = 112

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--MVVDFTEVEYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|134098728|ref|YP_001104389.1| glucose-6-phosphate isomerase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291003586|ref|ZP_06561559.1| glucose-6-phosphate isomerase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133911351|emb|CAM01464.1| glucose-6-phosphate isomerase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 547

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFM 62
           +G      +G+W S  +  +A+ +   +  +  S    V  + +  +D   A ++     
Sbjct: 383 DGSIEVHPSGDWLSAGVGTVAEALRAFLATAPGSGYLSVQ-AYLDRLDDASAAVLRPELA 441

Query: 63  EKYHGK 68
            +   +
Sbjct: 442 RRTGLQ 447


>gi|111225908|ref|YP_716702.1| anti-sigma-B factor antagonist [Frankia alni ACN14a]
 gi|111153440|emb|CAJ65197.1| Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor)
          [Frankia alni ACN14a]
          Length = 113

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E   TV    G        ++ + ++  +  S  S   +VD+  +  +D+ G  +++  +
Sbjct: 10 EGNHTVVVVGGEIDVYTAPKLREQLIDLV--SGGSYHLVVDMEGVEFLDSTGLGVLVGGL 67

Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86
          ++         +    E++  +  
Sbjct: 68 KRVRAHEGSLRLVCTQERILKIFR 91


>gi|317494030|ref|ZP_07952446.1| anti-anti-sigma factor [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917803|gb|EFV39146.1| anti-anti-sigma factor [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 104

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
            +  G      +    DD    +          +DLS +  +D+ G  ++++       
Sbjct: 14 TLKLIGILDRDSLMSFWDDRHTLLE-----GKKRLDLSGLERVDSAGLAMLVHVQNTDAT 68

Query: 68 KIKLQGVSTHIEQLFSLISF 87
                ++   E+L +LI+ 
Sbjct: 69 GASQIVITGVSERLRTLIAL 88


>gi|296129154|ref|YP_003636404.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
 gi|296020969|gb|ADG74205.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109]
          Length = 116

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             +      G          A  +  A+    +  +  +D  A+T +D+ G  +++    
Sbjct: 16  GDVLHVVLTGPVDMVVRERDAPALWPALA-DPRVRTVDLDAGAVTFLDSSGLSVLVRLAR 74

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
               +  +  +     ++  L+  T   +   +
Sbjct: 75  DAAERGVVLRLVATSPRVDDLLEQTGVGEWMAR 107


>gi|157364499|ref|YP_001471266.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO]
 gi|157315103|gb|ABV34202.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO]
          Length = 110

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           + +  G++ +   ++I   +   I  S      ++D+S +  ID+ G   ++  ++   
Sbjct: 15 LICKIDGDFDAYHSADIKKMIKEQIETS-NHRKLVIDMSDVPYIDSAGLGTMVAILKDAR 73

Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89
             K   +++  + +  +   T 
Sbjct: 74 NYGKEVILTSMRQNVKRIFEMTR 96


>gi|86742977|ref|YP_483377.1| anti-sigma-factor antagonist domain-containing protein [Frankia
          sp. CcI3]
 gi|86569839|gb|ABD13648.1| anti-sigma-factor antagonist (STAS) domain protein [Frankia sp.
          CcI3]
          Length = 113

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E   TV    G        ++ + ++  +  S  S   +VD+  +  +D+ G  +++  +
Sbjct: 10 EGNHTVVVVGGEIDVYTAPKLREQLIDLV--SGGSYHLVVDMEGVEFLDSTGLGVLVGGL 67

Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86
          ++         +    E++  +  
Sbjct: 68 KRVRAHEGSLRLVCTQERILKIFR 91


>gi|149195631|ref|ZP_01872688.1| hypothetical protein LNTAR_17103 [Lentisphaera araneosa HTCC2155]
 gi|149141093|gb|EDM29489.1| hypothetical protein LNTAR_17103 [Lentisphaera araneosa HTCC2155]
          Length = 823

 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 74/263 (28%), Gaps = 34/263 (12%)

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120
             ++       Q  +   E+L    +    K+   +K          +       + +  
Sbjct: 417 LAQRDEKAGIAQPSNEEREKLSHEKAQVTSKREVFEKDPLKAAPKEVEKKSSVWQEHMKP 476

Query: 121 FIND----SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP--VVILI 174
           FIN+           +   +  +       + F+  L+  +   + +G++ +   +    
Sbjct: 477 FINENWFMIAGLMLFIAGSLILSYFTWDKHWLFRYSLMPSLLASFTIGLAYLGKWIESKG 536

Query: 175 SFVTGAVIAQQGA-FQL--SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231
              T +    +GA  QL    F A        ++     +  ++ A+ ++          
Sbjct: 537 KEFTSSATILRGAAIQLLPINFMAVALMSADTAVSYKHFLIPVMAALYLSL-------TW 589

Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA--------- 282
           +G  +          M +      + PR   +I SL +L  +     +            
Sbjct: 590 LGLKR--------WCMAVSPQLNPLLPRTLLVINSLVMLAPITQIIGLESKHTLLMILGT 641

Query: 283 -SIVIWKYYDIPFAVFFSRFHST 304
              + +      F  F  R    
Sbjct: 642 GFYLGFALLSYSFHSFSLRVQQM 664


>gi|294340622|emb|CAZ89012.1| conserved hypothetical protein [Thiomonas sp. 3As]
          Length = 522

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
            R +G        + A  +     +S+++D+  VDL A+  +D   A  ++ ++E     
Sbjct: 441 VRLSGKLS----GKDATFLRNLRAQSLRADTVYVDLQAVQRVDFAAATDLLNWVEAQTQL 496

Query: 69  IKLQGVSTHIEQLFSLISFT 88
            K   +      L   +   
Sbjct: 497 GKSIELRGAHTLLVPFLQSV 516


>gi|220934768|ref|YP_002513667.1| hypothetical protein Tgr7_1597 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996078|gb|ACL72680.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 114

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE----LI 58
          ++     R +G  +   +SE A    +  N     ++ I+DLSA+  +++ G       +
Sbjct: 14 DDTSNTVRMSGALRLGGLSEYAPISELLENALDGREALIIDLSALEFLNSSGIATLSKFV 73

Query: 59 MYFMEKYHGKIKLQG 73
          +    +   ++ +QG
Sbjct: 74 ITARNRNDCRLAIQG 88


>gi|325179578|emb|CCA13976.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 472

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 7/86 (8%)

Query: 246 TMGLDFVRILI-SPRIWALII--SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302
              L  + +LI  PR+           LT+     +++   I          A+F     
Sbjct: 238 VQALSPLPLLIYLPRLLYGTSLEQNVALTLPCAVLSVLILMIFCTWRLSHSAAMFTKS-- 295

Query: 303 STATLANIFTGLIKAPFMACAIGIVA 328
                 + F   I+   +   IG++ 
Sbjct: 296 --NNTTDFFQSFIRHGVLGLVIGVIG 319


>gi|228957368|ref|ZP_04119127.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228802317|gb|EEM49175.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pakistani str. T13001]
          Length = 112

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|206968537|ref|ZP_03229493.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH1134]
 gi|229177532|ref|ZP_04304910.1| Anti-sigma factor antagonist [Bacillus cereus 172560W]
 gi|206737457|gb|EDZ54604.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH1134]
 gi|228605894|gb|EEK63337.1| Anti-sigma factor antagonist [Bacillus cereus 172560W]
          Length = 112

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|310657326|ref|YP_003935047.1| anti sigma b factor antagonist rsbv [Clostridium sticklandii DSM
          519]
 gi|308824104|emb|CBH20142.1| anti sigma b factor antagonist RsbV [Clostridium sticklandii]
          Length = 106

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 1/71 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           +  G       +   +++          D   +D S +  ID+ G  +++  +++   K
Sbjct: 18 LKLGGEIDIYTSNNFKEELQKIYLSEETGD-VYIDASDLEYIDSAGLGVLIGALKRLKQK 76

Query: 69 IKLQGVSTHIE 79
           K   +     
Sbjct: 77 DKDIYIRETKP 87


>gi|298505400|gb|ADI84123.1| STAS domain protein [Geobacter sulfurreducens KN400]
          Length = 120

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
               V    G+   P   E    ++ A++   Q+ S  VD+S ++ +D  G +L+    
Sbjct: 14 SGERYVLGVGGDLTIPFAGEFRGALLEALD---QAGSVEVDVSGVSAVDITGLQLLCSAH 70

Query: 63 EKY 65
             
Sbjct: 71 RAA 73


>gi|308505996|ref|XP_003115181.1| CRE-CHE-14 protein [Caenorhabditis remanei]
 gi|308259363|gb|EFP03316.1| CRE-CHE-14 protein [Caenorhabditis remanei]
          Length = 922

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 51/164 (31%), Gaps = 14/164 (8%)

Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202
                 +   L S+++      V  +  V + +F     +  Q    +      IF+   
Sbjct: 736 WWLMSTWFDLLSSIVQDCLSSVVGSLIFVAIFAF---IQLKFQAIAAVVTIAGVIFTSSA 792

Query: 203 MSILQLREIGVLLTAVMIAGRSGSAI-------VAEIGSMKINEEIDAIRTMGLDFVRIL 255
           +  L    +G +L AV++    G +         A          I    + G+  V + 
Sbjct: 793 IVTLLGWVLG-VLEAVILVLVVGLSFDYTLHYGAALPDLGCAEHRIREATSKGVGPVTLA 851

Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299
                 A    LP LT       +    +V+  +    F+ FF 
Sbjct: 852 AFTSFLAGASMLPALTHAFYQVGV---FLVVISWTSWTFSTFFY 892


>gi|223940826|ref|ZP_03632657.1| anti-sigma-factor antagonist and glycosyl transferase [bacterium
           Ellin514]
 gi|223890503|gb|EEF57033.1| anti-sigma-factor antagonist and glycosyl transferase [bacterium
           Ellin514]
          Length = 491

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 12  AGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFME---KYHG 67
            G   +    ++       +N +  ++   ++DLS +  ID+ G  L++   +   +   
Sbjct: 403 QGEITAANAEDVWQQTATQLNATDSANKHVLIDLSHVRFIDSTGLGLMVRVKKASLRLGI 462

Query: 68  KIKLQGVSTHIEQLFSLISFT 88
           +++  G  + +  + +L    
Sbjct: 463 RLEFTGTQSAVRNVLTLARLE 483


>gi|146295516|ref|YP_001179287.1| anti-sigma-factor antagonist [Caldicellulosiruptor
          saccharolyticus DSM 8903]
 gi|145409092|gb|ABP66096.1| anti-sigma-factor antagonist [Caldicellulosiruptor
          saccharolyticus DSM 8903]
          Length = 102

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +SENGI V    G         + D +   I+ S  S   IVD++ ++ ID+ G  + + 
Sbjct: 9  VSENGI-VIELKGELDIFSSPTLKDKLYTLIDTS--SSDVIVDMNEVSYIDSTGLGVFVG 65

Query: 61 FMEK---YHGKIKLQGVSTHIEQLFSL 84
           ++K       I L+ +  +++++F++
Sbjct: 66 ALKKSKQRGTNIVLKNLRPNVKKVFTI 92


>gi|328884277|emb|CCA57516.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor
          antagonist RsbV [Streptomyces venezuelae ATCC 10712]
          Length = 144

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
          TVF   G         I   V  A+         ++DLSA+   D+ G  +++     + 
Sbjct: 21 TVFLVRGEMDLVTSPRIRRRVHDAVA--GGRHDLVIDLSAVRFCDSSGVGVLIAARRLLR 78

Query: 64 KYHGKIKLQ 72
             G+++L 
Sbjct: 79 SCGGRLRLI 87


>gi|218896053|ref|YP_002444464.1| anti sigma b factor antagonist RsbV [Bacillus cereus G9842]
 gi|228943726|ref|ZP_04106128.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228976236|ref|ZP_04136715.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228977710|ref|ZP_04138096.1| Anti-sigma factor antagonist [Bacillus thuringiensis Bt407]
 gi|218540848|gb|ACK93242.1| anti sigma b factor antagonist RsbV [Bacillus cereus G9842]
 gi|228782008|gb|EEM30200.1| Anti-sigma factor antagonist [Bacillus thuringiensis Bt407]
 gi|228783481|gb|EEM31581.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228815945|gb|EEM62168.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|326938730|gb|AEA14626.1| anti-sigma B factor antagonist [Bacillus thuringiensis serovar
          chinensis CT-43]
          Length = 112

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + V+   ++       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKVMPITSEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|254385645|ref|ZP_05000968.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194344513|gb|EDX25479.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 336

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/120 (9%), Positives = 27/120 (22%), Gaps = 5/120 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
               +  G W        A+ +           + ++ LS         A L +   E+ 
Sbjct: 95  TLSLKLPGEWTESGAGRRAEKLFTVRVDVWGEGAVLLALST-----YADAWLTLDLRERP 149

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125
             ++  +        L  +   T  +       + +             G +        
Sbjct: 150 QPEVAAENAPRLATALKRISELTGAETDPGDPTRHARPTAEGFGDLLAEGAEYDDSWGTF 209


>gi|146296667|ref|YP_001180438.1| anti-sigma-factor antagonist [Caldicellulosiruptor
          saccharolyticus DSM 8903]
 gi|145410243|gb|ABP67247.1| anti-sigma-factor antagonist [Caldicellulosiruptor
          saccharolyticus DSM 8903]
          Length = 109

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           G  + R  G               M I  S +    ++D+S +T +D+ G   ++   +
Sbjct: 9  EGTLILRIRGELDQYNADRFRLRFDMKI-VSPEVQKVVIDISELTFMDSSGVGFLVGRFK 67

Query: 64 KYHG 67
              
Sbjct: 68 TARA 71


>gi|331696148|ref|YP_004332387.1| multi-sensor signal transduction histidine kinase [Pseudonocardia
            dioxanivorans CB1190]
 gi|326950837|gb|AEA24534.1| multi-sensor signal transduction histidine kinase [Pseudonocardia
            dioxanivorans CB1190]
          Length = 1859

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 4/50 (8%), Positives = 23/50 (46%)

Query: 20   ISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69
            ++ +   +   +  +    + ++DL+ +T + + G  +++  + +   + 
Sbjct: 1778 MAAVRGPLRAELAAAPPGSTTVLDLTGVTYLPSAGIGMLVDLIGEVRARG 1827


>gi|326443274|ref|ZP_08218008.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 971

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 18/155 (11%)

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           + TAV +       +   + +M + ++      MG+   +      I AL+     L   
Sbjct: 65  MATAVGVNIWLAHRLRPPLSAMSLEQQSLDRYRMGIAPYKKWALLAITALV----GLIAG 120

Query: 274 ANFSA---IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI-GIVAM 329
           A+ +         I    + +               L   +   +     A  +  ++A 
Sbjct: 121 ASATGQWRTWLMWIHGVPFGEKDPQFKLDVSFYAFDLP--WYRFLLGFGFAAVVLSLIAA 178

Query: 330 ------KEGFA-VGVHSNSLGKKVTT-CVVQSISI 356
                   G       + + G       V+  I +
Sbjct: 179 ALTHYLYGGLRITSPGARATGAATGHLSVLLGIFV 213


>gi|254388964|ref|ZP_05004195.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197702682|gb|EDY48494.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 993

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 18/155 (11%)

Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273
           + TAV +       +   + +M + ++      MG+   +      I AL+     L   
Sbjct: 87  MATAVGVNIWLAHRLRPPLSAMSLEQQSLDRYRMGIAPYKKWALLAITALV----GLIAG 142

Query: 274 ANFSA---IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI-GIVAM 329
           A+ +         I    + +               L   +   +     A  +  ++A 
Sbjct: 143 ASATGQWRTWLMWIHGVPFGEKDPQFKLDVSFYAFDLP--WYRFLLGFGFAAVVLSLIAA 200

Query: 330 ------KEGFA-VGVHSNSLGKKVTT-CVVQSISI 356
                   G       + + G       V+  I +
Sbjct: 201 ALTHYLYGGLRITSPGARATGAATGHLSVLLGIFV 235


>gi|228906735|ref|ZP_04070607.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 200]
 gi|228852912|gb|EEM97694.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 200]
          Length = 112

 Score = 36.5 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDLGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFTGVSKRLKRLFDITGLTE 98


>gi|302555047|ref|ZP_07307389.1| anti-sigma-B factor antagonist [Streptomyces viridochromogenes DSM
           40736]
 gi|302472665|gb|EFL35758.1| anti-sigma-B factor antagonist [Streptomyces viridochromogenes DSM
           40736]
          Length = 128

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 31/100 (31%), Gaps = 5/100 (5%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64
             V              + + +   +  +      ++DL  ++ ID  G  ++     + 
Sbjct: 17  ARVVTLHDEIDLLTAPALRERLD--LLTAGPRPDLVLDLRPVSFIDCAGLGVLCRARNRV 74

Query: 65  --YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
               G+++L   S  + ++          ++    P +  
Sbjct: 75  LARRGRLRLVTDSGFLRRVLRHAGLAGVFEVLPGMPPQPR 114


>gi|225862938|ref|YP_002748316.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB102]
 gi|225788240|gb|ACO28457.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB102]
          Length = 112

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---EL 57
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G      
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 66

Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
          ++  ++K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAIKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|328882266|emb|CCA55505.1| anti-sigma factor antagonist [Streptomyces venezuelae ATCC 10712]
          Length = 142

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           G  V    G +    +  +AD +  A+         I+D S IT  D+  A  +M  + +
Sbjct: 49  GAQVVEAQGEYDLHSVGPLADALWRAVETHPM---VILDASRITFADSS-ALNLMLLVHR 104

Query: 65  YHGKIKLQGVSTHIEQL 81
             GK+++   S  +++L
Sbjct: 105 T-GKLRVTAPSAQVQRL 120


>gi|311896981|dbj|BAJ29389.1| putative antagonist protein [Kitasatospora setae KM-6054]
          Length = 113

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    +   +VD+  +  +D+ G  +++  ++
Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNYHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|154494150|ref|ZP_02033470.1| hypothetical protein PARMER_03496 [Parabacteroides merdae ATCC
          43184]
 gi|154086012|gb|EDN85057.1| hypothetical protein PARMER_03496 [Parabacteroides merdae ATCC
          43184]
          Length = 99

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 3  ENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ENG  TV   +G   +    ++  ++   +    ++ + ++D + +T I + G  L++  
Sbjct: 6  ENGKETVINLSGQLDTLTSVDLEKEIAPIL--QGEAQTVVLDGAELTYISSAGLRLLLTL 63

Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTH 89
             M+   G  +L+ +   I ++ ++  F+H
Sbjct: 64 QKGMKNKGGSFRLKNIQNEIMEILNITGFSH 94


>gi|254000414|ref|YP_003052477.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4]
 gi|253987093|gb|ACT51950.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4]
          Length = 106

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G     E +E    +   +    Q  +  +DL+ +TEIDT G +L++    +   
Sbjct: 13 HVVIEGEMTIFEAAEYHAAL---LPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQ 69

Query: 68 KIKLQGVSTHIEQLFSLISFTH 89
                ++ H E +  ++  T 
Sbjct: 70 TGSTLSITGHSETVQQVLDATD 91


>gi|269957530|ref|YP_003327319.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
          15894]
 gi|269306211|gb|ACZ31761.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM
          15894]
          Length = 110

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 6/91 (6%)

Query: 3  ENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59
          + G  V    AG         +   +             +VDL A+  +D+ G   ++  
Sbjct: 7  DAGTYVALAPAGRLDLASAPRVKARIDDLARNGRA--RVVVDLGAVDHVDSSGLGALIAG 64

Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
               +  G +++  V   +  +  L +   
Sbjct: 65 LKATRQAGGGLRIARVGEQVRAVLKLTNLDR 95


>gi|213619327|ref|ZP_03373153.1| putative anti-sigma factor antagonist [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-2068]
          Length = 68

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 24/50 (48%)

Query: 38 DSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF 87
              +DLS I+ +DT G  L+ + + +   +     +S   +++++L   
Sbjct: 8  GVTRIDLSQISRVDTGGLALLAHLVNQAKKQGNAVSLSGVNDKVYALAQL 57


>gi|295839324|ref|ZP_06826257.1| STAS domain-containing protein [Streptomyces sp. SPB74]
 gi|197696941|gb|EDY43874.1| STAS domain-containing protein [Streptomyces sp. SPB74]
          Length = 152

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           + R  G      +  + +++  A  +       I+DLS +   D+    L++    +   
Sbjct: 61  LVRAFGELDLDTVGGLREELEAAAARYP---VVILDLSRVEFGDSGFLNLLIRV--RTTT 115

Query: 68  KIKLQGVSTHIEQLFSL 84
           +++L   +  + QLF+L
Sbjct: 116 RLRLVAPTESLRQLFAL 132


>gi|165871646|ref|ZP_02216291.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0488]
 gi|167635502|ref|ZP_02393815.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0442]
 gi|167638919|ref|ZP_02397193.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0193]
 gi|170687536|ref|ZP_02878752.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0465]
 gi|170707955|ref|ZP_02898404.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0389]
 gi|177653583|ref|ZP_02935757.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0174]
 gi|190566671|ref|ZP_03019588.1| anti sigma b factor antagonist RsbV [Bacillus anthracis
          Tsiankovskii-I]
 gi|227816154|ref|YP_002816163.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. CDC
          684]
 gi|229603424|ref|YP_002865545.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0248]
 gi|164712547|gb|EDR18079.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0488]
 gi|167513049|gb|EDR88421.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0193]
 gi|167529120|gb|EDR91874.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0442]
 gi|170127115|gb|EDS95993.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0389]
 gi|170668349|gb|EDT19096.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0465]
 gi|172081387|gb|EDT66461.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0174]
 gi|190562223|gb|EDV16191.1| anti sigma b factor antagonist RsbV [Bacillus anthracis
          Tsiankovskii-I]
 gi|227005050|gb|ACP14793.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. CDC
          684]
 gi|229267832|gb|ACQ49469.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str.
          A0248]
          Length = 112

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++     S +    +VD + +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVRIVVDFNKVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|302037674|ref|YP_003797996.1| putative anti-sigma-factor antagonist (fragment) [Candidatus
          Nitrospira defluvii]
 gi|300605738|emb|CBK42071.1| putative Anti-sigma-factor antagonist (fragment) [Candidatus
          Nitrospira defluvii]
          Length = 76

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          + + AG+    E+  + +++  A+    Q     +DLS + ++D    +L++    +   
Sbjct: 2  ILKPAGDLTIFEVGALYEEIKQAVTVHPQ---VELDLSEVDKLDASAIQLLIAV--RRSE 56

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +I L G++  +    + +  
Sbjct: 57 RIVLTGMTDPMRSRMAELGA 76


>gi|284032354|ref|YP_003382285.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836]
 gi|283811647|gb|ADB33486.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836]
          Length = 97

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 3/61 (4%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          + +G      AG       +  A  +  A  ++      +VDL+A+  +D+ G   +   
Sbjct: 12 TADGRQTLTVAGEIDVSNAAAFATALSEASAETPP---LVVDLTAVEYLDSAGLAALFDH 68

Query: 62 M 62
           
Sbjct: 69 A 69


>gi|210630384|ref|ZP_03296432.1| hypothetical protein COLSTE_00316 [Collinsella stercoris DSM
          13279]
 gi|210160515|gb|EEA91486.1| hypothetical protein COLSTE_00316 [Collinsella stercoris DSM
          13279]
          Length = 104

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 8/83 (9%), Positives = 29/83 (34%), Gaps = 2/83 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V    G        ++ + + +A+ +   ++   +D S +  ID+ G  +++      
Sbjct: 13 RYVVAVTGEIDISNADKLRNAIDLALEQ--PTERVELDFSQVAYIDSTGIGVLVGAAHHA 70

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
            + +   ++     +  +    
Sbjct: 71 GERGRGFAITHAQPNVVRVAQLL 93


>gi|291437638|ref|ZP_06577028.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291340533|gb|EFE67489.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 129

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/105 (10%), Positives = 27/105 (25%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           V    G     E+S + D +   ++ S      + D+  +         L+         
Sbjct: 19  VLVLRGPVTRDEVSGLCDALRALLDGSGAGPVVVCDVGGLGPPGLAAVNLLARLQLTARR 78

Query: 68  KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
                 +      L  L+     +     +P++       +    
Sbjct: 79  AGGRIRLRDPSPALCVLLDLVGLRFEAEGQPEQREPPLGVEEAVE 123


>gi|134100727|ref|YP_001106388.1| anti-sigma-factor antagonist [Saccharopolyspora erythraea NRRL
          2338]
 gi|133913350|emb|CAM03463.1| anti-sigma-factor antagonist [Saccharopolyspora erythraea NRRL
          2338]
          Length = 103

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
          + V   +G+       ++  D+   + +  +    +VDL+ +    + G   ++   ++ 
Sbjct: 7  VAVLSVSGDVDMVTAPQVEQDLAALLEQQPE--VLVVDLTEVGFFASAGLTALVAAYKQA 64

Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
           G+  L+ V+T    +  L      +KI 
Sbjct: 65 EGRTGLRVVATSSATVRPLKVTALDRKIP 93


>gi|134754|sp|P26777|SP2AA_BACLI RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage
           II sporulation protein AA
 gi|304171|gb|AAA22795.1| sporulation protein [Bacillus licheniformis]
          Length = 117

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
           +   R  G         +   V   +         +++L+ ++ +D+ G  +++     +
Sbjct: 13  VLCIRLTGELDHHTAETLRKQVSGHLE-QTDIRHIVMNLADLSFMDSSGLGVVLGRYKEI 71

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
           ++  G++ +  +S  +++LF +       +++  + +
Sbjct: 72  KQLGGEMIVCAISPAVKRLFDMSGLFKIIRLEQSEQR 108


>gi|328885084|emb|CCA58323.1| Inducers of aerial mycelium formation biosynthesis protein BldG
          [Streptomyces venezuelae ATCC 10712]
          Length = 107

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++  +     ++DL+ +   D  G  +IM   
Sbjct: 4  RGDHVELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLTGLDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLF 82
              +   ++ L+GV   +++L 
Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLL 84


>gi|300782226|ref|YP_003762517.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299791740|gb|ADJ42115.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 117

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/93 (8%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
               G        ++ + +   +    ++   + DL+ +T  D+    +++    +   +
Sbjct: 26  VVVTGELDLLTSPQLQEAL-AGLIADKRAQRVVADLTGVTFFDSSALNVVLRAQRQAGEQ 84

Query: 69  IKLQGV--STHIEQLFSLISFTHRKKIKNQKPQ 99
                V  S  + ++  L        +      
Sbjct: 85  DVELAVVPSPAVSRVIELTGVAEHLSVSEDPQA 117


>gi|302560081|ref|ZP_07312423.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302477699|gb|EFL40792.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 126

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
           V R +G         +   V   + +     S ++DLS +   D+ G  +++     + 
Sbjct: 16 AVLRVSGELDLMTSPVLRQRVHDVVAE--GRHSLVLDLSEVWFCDSSGVGVLIASRRLLR 73

Query: 64 KYHGKIKLQ 72
             G ++L 
Sbjct: 74 SCQGNLRLI 82


>gi|229819126|ref|YP_002880652.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
 gi|229565039|gb|ACQ78890.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333]
          Length = 117

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G+ V    G         + +++  A+ +       +VDLS +  ID+ G  +++   
Sbjct: 10 RSGVPVVSVTGEVDVYTGPVLREELEKALARGTTG--VVVDLSGVAFIDSTGLGVLVTAH 67

Query: 63 EKYHGKI 69
           +   + 
Sbjct: 68 RQLASRG 74


>gi|297192030|ref|ZP_06909428.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
          25486]
 gi|197719520|gb|EDY63428.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC
          25486]
          Length = 107

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
                    G       ++    +  A++    +   ++DL+ +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTVLHSAVDD--GAGDLVLDLTHLDSWDATGLGVIMGAH 61

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
              +   ++ L+GV   +++L        
Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91


>gi|254388760|ref|ZP_05003993.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC
          27064]
 gi|294813372|ref|ZP_06772015.1| Anti-sigma-B factor antagonist [Streptomyces clavuligerus ATCC
          27064]
 gi|326441799|ref|ZP_08216533.1| anti-sigma-factor antagonist [Streptomyces clavuligerus ATCC
          27064]
 gi|60687275|gb|AAX35717.1| BldG [Streptomyces clavuligerus ATCC 27064]
 gi|197702480|gb|EDY48292.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC
          27064]
 gi|294325971|gb|EFG07614.1| Anti-sigma-B factor antagonist [Streptomyces clavuligerus ATCC
          27064]
          Length = 117

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 72

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95


>gi|313115502|ref|ZP_07800967.1| STAS domain protein [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622212|gb|EFQ05702.1| STAS domain protein [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 105

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 4/86 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
            +     AG         +   +  A+       + I+D   +  +D+ G  LI+    
Sbjct: 10 GDVLYAYLAGEIDHDAAQSLRIQLDDALVSR-APQTMILDFGGVGFMDSSGVGLILGRQR 68

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
                  +++Q   + +E++  L  
Sbjct: 69 IARTLGTALRVQHTPSQLEKVLQLAR 94


>gi|300856560|ref|YP_003781544.1| putative anti-sigma factor F antagonist [Clostridium ljungdahlii
          DSM 13528]
 gi|300436675|gb|ADK16442.1| predicted anti-sigma factor F antagonist [Clostridium ljungdahlii
          DSM 13528]
          Length = 111

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +   +    G        E+ + +   +++    +  I+D S ++ +D+ G  +++   +
Sbjct: 9  DNKLIVYMRGELDHHSAEEVRNKIDDRLDRE-SLNKLIMDFSGVSFMDSSGIGVVIGRYK 67

Query: 64 KYH---GKIKLQGVSTHIEQLFSL 84
          K +   G + + G    ++++F L
Sbjct: 68 KLNSADGSVCIVGAINSVKRVFEL 91


>gi|75761674|ref|ZP_00741620.1| Anti-sigma B factor antagonist [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|228899670|ref|ZP_04063923.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 4222]
 gi|74490830|gb|EAO54100.1| Anti-sigma B factor antagonist [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|228859979|gb|EEN04386.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 4222]
          Length = 112

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   N+       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDLGYTVQLNGEIDAYTASDLKNKIMPIANEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|271968765|ref|YP_003342961.1| hypothetical protein Sros_7537 [Streptosporangium roseum DSM 43021]
 gi|270511940|gb|ACZ90218.1| hypothetical protein Sros_7537 [Streptosporangium roseum DSM 43021]
          Length = 121

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           +V    G+       +  + +   + +       I+D + +   D+ G   ++  M + +
Sbjct: 15  SVVSLIGDLDKLSAPQFEEALAGLLTQGRV--RIIIDTAGLGFCDSTGVWALLTTMRRAY 72

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99
            +     ++     L  L+  T   +     P 
Sbjct: 73  EQNGWLRLAGVHGFLGRLLELTRLGEAFPIDPD 105


>gi|261419869|ref|YP_003253551.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61]
 gi|319766684|ref|YP_004132185.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacillus
           sp. Y412MC52]
 gi|261376326|gb|ACX79069.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61]
 gi|317111550|gb|ADU94042.1| Sulfate transporter/antisigma-factor antagonist STAS [Geobacillus
           sp. Y412MC52]
          Length = 141

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/119 (10%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
            +  G             +  A+   ++    +VD+S +  +D+ G  L++ F ++    
Sbjct: 21  IKLTGRLAYDTQLAAEQKLATAVAA-VKRRLVVVDVSGLRFLDSTGLALLVRFFKQIVSE 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              + +        +   L++   R        Q+        +  +   + +      
Sbjct: 80  SRAMAIVVRDNAAIEKILLMAKLDRLLPIVGDEQQLLSLAPPSSFDHISQEALYSAWRQ 138


>gi|218437394|ref|YP_002375723.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424]
 gi|218170122|gb|ACK68855.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424]
          Length = 118

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/115 (9%), Positives = 41/115 (35%), Gaps = 4/115 (3%)

Query: 1   MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58
           +  + I      G   +  I++  + + + ++   +    +VD++ +  +D+ G   +  
Sbjct: 5   LETDTIVTLEPTGYLTAANITQFQEQLTLNVS-DPEKSIFLVDMTQVEFLDSAGLMALAS 63

Query: 59  -MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112
                +    +  +  +   ++ +F L        I + +       N  +++  
Sbjct: 64  ACRLAQSLDKQFSICSIPPSVKIIFELTQLDRFLDIYDNRETFEATLNQTQDIAA 118


>gi|56420164|ref|YP_147482.1| stage II sporulation protein AA [Geobacillus kaustophilus HTA426]
 gi|56380006|dbj|BAD75914.1| stage II sporulation protein AA [Geobacillus kaustophilus HTA426]
          Length = 141

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
           +  G             +  A+   ++    +VD+S +  +D+ G  L++ F ++
Sbjct: 21 IKLTGRLAYDTQLAAEQKLATAVAA-VKRRLVVVDVSGLRFLDSTGLALLVRFFKQ 75


>gi|291006470|ref|ZP_06564443.1| anti-sigma-factor antagonist [Saccharopolyspora erythraea NRRL
           2338]
          Length = 113

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
           + V   +G+       ++  D+   + +  +    +VDL+ +    + G   ++   ++ 
Sbjct: 17  VAVLSVSGDVDMVTAPQVEQDLAALLEQQPE--VLVVDLTEVGFFASAGLTALVAAYKQA 74

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94
            G+  L+ V+T    +  L      +KI 
Sbjct: 75  EGRTGLRVVATSSATVRPLKVTALDRKIP 103


>gi|194216558|ref|XP_001490020.2| PREDICTED: similar to Putative sodium-coupled neutral amino acid
           transporter 10 [Equus caballus]
          Length = 1416

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 29/304 (9%), Positives = 77/304 (25%), Gaps = 25/304 (8%)

Query: 55  AELIMYFMEKYHGKIKLQGVSTHIEQL--------------FSLISFTHRKKIKNQKPQR 100
           A L+      +  + +         +L                 +       + +Q    
Sbjct: 323 ASLLWTLARAHRAQQRASRAPALSLRLEGRDAGPGASCGIVLGALLLVFCSWMTHQSCMF 382

Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAH--ILGLVISNTGEFCASSYKFKGFLLSLIR 158
                S      + G  +  +           ++GL++     F            + + 
Sbjct: 383 LVKSASLSKRRTYAGLALHAYGKAGKMLVETSMIGLMLGTCAAFYVVIGDLGSNFFARLF 442

Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQ--GAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216
                G   V ++ ++S      ++ Q      +  F A       + +  +  +   L 
Sbjct: 443 GFQVTGTFRVLLLFVVSLCIVLPLSLQRNMMASIQSFSAMALIFYTVFMFVI--LLSSLK 500

Query: 217 AVMIAGR--SGSAIVAEIGSMK---INEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271
             +  G+     + V   G  +   I     A ++  L     L  P +  +        
Sbjct: 501 HGLFGGQWLQRVSYVRWDGIFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSL 560

Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331
            +     ++        + +         F S      I  G + +  +   + I+  ++
Sbjct: 561 NVVTTFYVMVGFFGYVSFAEATAGNVLMHFPSNLVTEMIRVGFMMSVAVGFPMMILPCRQ 620

Query: 332 GFAV 335
               
Sbjct: 621 ALNT 624


>gi|29830470|ref|NP_825104.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29607582|dbj|BAC71639.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
           MA-4680]
          Length = 125

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 5/107 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFME 63
            V    G         + + V     +       ++DL  ++ +D+ G  ++   M    
Sbjct: 18  AVVVLTGEVDCDLTPALREAVDSLTAED--HGLIVLDLGQVSFMDSAGLGVVVYGMRRAG 75

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL 110
              G+++L G    + +L  L       ++    P    +  + K L
Sbjct: 76  ALGGRLRLAGPGEQVRELLRLTGLDAAVEVFGDVPAACAYGPTPKGL 122


>gi|297561593|ref|YP_003680567.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296846041|gb|ADH68061.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 107

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 2/83 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            V    G+      S +  +V +   +S       +DLS +   D+ G   ++   +  
Sbjct: 14 GPVLDVTGSLDYDHASTLRHEVRLLALES--GQCLSIDLSGLDFCDSSGISALLAARQHA 71

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
                  +         ++S  
Sbjct: 72 LAAGADIALLAVPANTLRIMSMV 94


>gi|218233542|ref|YP_002365764.1| anti sigma b factor antagonist RsbV [Bacillus cereus B4264]
 gi|228951466|ref|ZP_04113572.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|229068651|ref|ZP_04201949.1| Anti-sigma factor antagonist [Bacillus cereus F65185]
 gi|229078302|ref|ZP_04210866.1| Anti-sigma factor antagonist [Bacillus cereus Rock4-2]
 gi|218161499|gb|ACK61491.1| anti sigma b factor antagonist RsbV [Bacillus cereus B4264]
 gi|228704977|gb|EEL57399.1| Anti-sigma factor antagonist [Bacillus cereus Rock4-2]
 gi|228714398|gb|EEL66275.1| Anti-sigma factor antagonist [Bacillus cereus F65185]
 gi|228808173|gb|EEM54686.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
          Length = 112

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + V+   ++       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKVMPITSEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFTGVSKRLKRLFDITGLTE 98


>gi|66047364|ref|YP_237205.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae B728a]
 gi|289676094|ref|ZP_06496984.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae FF5]
 gi|63258071|gb|AAY39167.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae B728a]
 gi|330895262|gb|EGH27600.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. japonica str. M301072PT]
 gi|330937999|gb|EGH41780.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. pisi str. 1704B]
 gi|330969697|gb|EGH69763.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. aceris str. M302273PT]
 gi|330981138|gb|EGH79241.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. aptata str. DSM 50252]
          Length = 101

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R  G        ++      A+ KS       +D S + +  ++G  L++ FM      
Sbjct: 14 LRLIGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDARDA 72

Query: 69 IKLQGVSTHIEQLFSLIS 86
           K   + +  E +  +  
Sbjct: 73 GKSMTLRSLPEDMRQIAR 90


>gi|89895048|ref|YP_518535.1| hypothetical protein DSY2302 [Desulfitobacterium hafniense Y51]
 gi|219669459|ref|YP_002459894.1| anti-sigma-factor antagonist [Desulfitobacterium hafniense DCB-2]
 gi|89334496|dbj|BAE84091.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539719|gb|ACL21458.1| anti-sigma-factor antagonist [Desulfitobacterium hafniense DCB-2]
          Length = 115

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
            +    G         +   +   I +     + I++L  I+ ID+ G  +I+   +K 
Sbjct: 11 TLLLTLKGELDMNTSESLRQTIDSEIERR-GVRTVILNLEDISFIDSSGLGVILGRYKKL 69

Query: 66 ---HGKIKLQGVSTHIEQLFSL 84
              GK+ +  V  HI ++  L
Sbjct: 70 LPMGGKVIITRVPPHIYKIMEL 91


>gi|325001315|ref|ZP_08122427.1| hypothetical protein PseP1_21247 [Pseudonocardia sp. P1]
          Length = 122

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G  V    G   +     +   +     +   +   +VDL+ +T + + G   ++   E
Sbjct: 22 DGAVVVHVHGEIDTMTAPVVRQRLA---GQIPAASLLVVDLTRVTFLGSAGLAALVEAKE 78

Query: 64 KYHGKIKLQGV 74
          K  G      +
Sbjct: 79 KAEGDGSRLRL 89


>gi|302544272|ref|ZP_07296614.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor)
          [Streptomyces hygroscopicus ATCC 53653]
 gi|302461890|gb|EFL24983.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor)
          [Streptomyces himastatinicus ATCC 53653]
          Length = 113

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|282866277|ref|ZP_06275323.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
 gi|282558863|gb|EFB64419.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE]
          Length = 136

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 8   VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64
           V    G         + + +  A+ +       +VD S +   D+ G  +++      E 
Sbjct: 40  VVTPVGELDHHTADLLREPLESAVEQGRA--RLVVDCSGLEFCDSTGLNVLLGARLKAEA 97

Query: 65  YHGKIKLQGVSTHIEQLFSLISFT 88
             G + L G+   + ++F +    
Sbjct: 98  AGGGVHLAGMQPVVARVFEITGAE 121


>gi|256377261|ref|YP_003100921.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255921564|gb|ACU37075.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 114

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          +G+ V R +G        ++   V+        + + +VDLS +T   + G   + Y  +
Sbjct: 15 DGVAVVRASGEIDMANSDDL--RVIATDLVDGGAQALVVDLSEVTFFASSGIAALAYLRD 72

Query: 64 KYHGKIKLQGVSTHIEQLFS 83
          +    +     S  + +   
Sbjct: 73 RVGRGLVRAVPSRSVRRSLE 92


>gi|196044217|ref|ZP_03111453.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB108]
 gi|196024856|gb|EDX63527.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB108]
          Length = 111

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 8  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97


>gi|158425837|ref|YP_001527129.1| anti-sigma factor antagonist [Azorhizobium caulinodans ORS 571]
 gi|158332726|dbj|BAF90211.1| anti-sigma factor antagonist [Azorhizobium caulinodans ORS 571]
          Length = 100

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
              TV + +G   +         ++ A+  S  + + IVD++ +  + + G   ++   
Sbjct: 8  SGEDTVLKVSGRLDTLNAKPFEGKLLEAVKAS--NGAIIVDMAGVDYVSSSGLRALLVAG 65

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84
            M  +  K++L+ +   I+++F +
Sbjct: 66 KAMSPHKRKLRLKTLQPQIQEVFDI 90


>gi|218887528|ref|YP_002436849.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str.
          'Miyazaki F']
 gi|218758482|gb|ACL09381.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str.
          'Miyazaki F']
          Length = 111

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            G+TV  F+G   +  ++   +     +     ++  ++D+  I  I + G   I+  +
Sbjct: 8  RGGVTVLAFSGRMDATTVAAFDEAWRARLEA--GANRLVIDMGGIEYISSAGLRGILGLL 65

Query: 63 EKY 65
          +  
Sbjct: 66 KAC 68


>gi|229042832|ref|ZP_04190568.1| Anti-sigma factor antagonist [Bacillus cereus AH676]
 gi|229108565|ref|ZP_04238178.1| Anti-sigma factor antagonist [Bacillus cereus Rock1-15]
 gi|228674896|gb|EEL30127.1| Anti-sigma factor antagonist [Bacillus cereus Rock1-15]
 gi|228726492|gb|EEL77713.1| Anti-sigma factor antagonist [Bacillus cereus AH676]
          Length = 112

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD   +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPITSEKEVH--IVVDFHNVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|226329327|ref|ZP_03804845.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198]
 gi|225202513|gb|EEG84867.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198]
          Length = 69

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334
             F++          ++    IK+   A  +  +A+  G  
Sbjct: 9   GFFWASMQGAVEWRLDLVNCFIKSVVFAITVTWIALLTGMT 49


>gi|114567573|ref|YP_754727.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114338508|gb|ABI69356.1| anti-sigma F factor antagonist (stage II sporulation protein AA)
          [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 99

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 7/70 (10%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          E+       AG   S    ++  ++  ++   +  +  ++D + +  + + G  +I+   
Sbjct: 8  EDRKLTIALAGRLDSNSAPQLEAELKESV---VDINDLVLDFAELVYLSSAGLRVILAAQ 64

Query: 63 EKYHGKIKLQ 72
          ++ + + ++ 
Sbjct: 65 KQMNKQGRMV 74


>gi|156741180|ref|YP_001431309.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941]
 gi|156232508|gb|ABU57291.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941]
          Length = 116

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 32/86 (37%), Gaps = 11/86 (12%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66
          +    G   +    ++         ++      ++DLS +  + + G  +++   ++   
Sbjct: 13 LLTITGRLDAMNAPQLKQKFDELFEQNRY--RIVLDLSGLEYVASPGLRVLIEARKRARD 70

Query: 67 --------GKIKLQGVSTHIEQLFSL 84
                  G +++  +   I+++F L
Sbjct: 71 WKLTDLEGGDVRIANLPPRIKEVFDL 96


>gi|52144329|ref|YP_082497.1| anti-sigma B factor antagonist [Bacillus cereus E33L]
 gi|51977798|gb|AAU19348.1| anti-sigma B factor antagonist [Bacillus cereus E33L]
          Length = 111

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 8  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 65

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97


>gi|257483482|ref|ZP_05637523.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci
          ATCC 11528]
 gi|330888610|gb|EGH21271.1| STAS domain-containing protein [Pseudomonas syringae pv. mori
          str. 301020]
 gi|330987101|gb|EGH85204.1| STAS domain-containing protein [Pseudomonas syringae pv.
          lachrymans str. M301315]
 gi|331011545|gb|EGH91601.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci
          ATCC 11528]
          Length = 101

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R  G        ++      A+ KS       +D S + +  ++G  L++ FM      
Sbjct: 14 LRLIGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDAQEA 72

Query: 69 IKLQGVSTHIEQLFSLIS 86
           K   V +  E +  +  
Sbjct: 73 GKSITVRSLPEDMRQIAR 90


>gi|213404890|ref|XP_002173217.1| amino acid permease [Schizosaccharomyces japonicus yFS275]
 gi|212001264|gb|EEB06924.1| amino acid permease [Schizosaccharomyces japonicus yFS275]
          Length = 588

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 4/160 (2%)

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223
           G  G   V + +  + A +   G         +      +  +  R +G  +  + I   
Sbjct: 268 GFKGFCSVFITAAFSLAGVEIIGIAAGQTKNPQKAIPGALKRVFYRILGFFVITLFIVSL 327

Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283
           + +   + +G+      + +   + +    I + P I   +I + +L++      +   +
Sbjct: 328 NVAYNDSRLGTQSGFHNVTSPFILAIQDGGIRVLPDIVNAVILISILSVANTSVFMASNT 387

Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323
           I           VF         +  +  GL         
Sbjct: 388 IYGMALSHQAPPVFTYVNKHGLPV--VAVGL--CFAFGFL 423


>gi|297159262|gb|ADI08974.1| anti-sigma-factor antagonist [Streptomyces bingchenggensis BCW-1]
          Length = 113

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    +   +VD+  +  +D+ G  +++  ++
Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNYHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|271968844|ref|YP_003343040.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270512019|gb|ACZ90297.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
           factor)-like protein [Streptosporangium roseum DSM
           43021]
          Length = 121

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 6   ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62
             V + +G         +  ++  A   ++Q+ + I+DLSA+T  D+ G   ++      
Sbjct: 21  TLVVQASGELDHYHTPVLRAEMNRA-WNALQAPTLILDLSALTFCDSSGIGELLQARHHG 79

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +    +  + G+  ++ +  +L   T 
Sbjct: 80  QVEGVRFIITGIQGNLARRLNLAGLTQ 106


>gi|152989231|ref|YP_001350360.1| hypothetical protein PSPA7_5024 [Pseudomonas aeruginosa PA7]
 gi|150964389|gb|ABR86414.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 102

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          + E      +  G         + +     I+ S Q+   +VD SA+    ++G  L++ 
Sbjct: 6  LREGAPGELQLVGVLDYSSGPALREQGGRLIHAS-QAAQLVVDCSAVERSSSVGISLLLA 64

Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86
          FM       K   +    + +  +  
Sbjct: 65 FMRDARKAGKTLSIRALPDDMREIAK 90


>gi|71734607|ref|YP_276263.1| STAS domain-containing protein [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|71555160|gb|AAZ34371.1| STAS domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320322483|gb|EFW78576.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea
          str. B076]
 gi|320330048|gb|EFW86035.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea
          str. race 4]
 gi|330875105|gb|EGH09254.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea
          str. race 4]
          Length = 101

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R  G        ++      A+ KS       +D S + +  ++G  L++ FM      
Sbjct: 14 LRLMGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDAQEA 72

Query: 69 IKLQGVSTHIEQLFSLIS 86
           K   V +  E +  +  
Sbjct: 73 GKSITVRSLPEDMRQIAR 90


>gi|83589259|ref|YP_429268.1| anti-sigma-factor antagonist domain-containing protein [Moorella
          thermoacetica ATCC 39073]
 gi|83572173|gb|ABC18725.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella
          thermoacetica ATCC 39073]
          Length = 109

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 24/85 (28%), Gaps = 4/85 (4%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
          N        G      +  +                 I++LS ++ ID+ G   ++   +
Sbjct: 10 NDSRCLNLKGELDMETLPMLE----RMAEAREGEGRLIINLSGVSFIDSTGLRGLLTIQQ 65

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88
          ++  K           ++  +    
Sbjct: 66 EWAAKGGRVHFLNPCPEVAEVFRLV 90


>gi|289643667|ref|ZP_06475779.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca
          glomerata]
 gi|289506500|gb|EFD27487.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca
          glomerata]
          Length = 113

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          +E   T+    G        ++ + ++  +  S  S   +VD+  +  +D+ G  +++  
Sbjct: 9  TEGDFTIVVVGGEIDVYTAPKLREQLIDLV--SGGSYHLVVDMEGVEFLDSTGLGVLVGG 66

Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86
          +++         +    E++  +  
Sbjct: 67 LKRVRAHEGTLRLVCTQERILKIFR 91


>gi|73994396|ref|XP_857514.1| PREDICTED: similar to ATPase, H+ transporting, lysosomal V0 subunit
           a isoform 2 isoform 8 [Canis familiaris]
          Length = 804

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 29/286 (10%), Positives = 82/286 (28%), Gaps = 49/286 (17%)

Query: 58  IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117
           +           +  G +     + S ++    K+      + + F   F+N+    G  
Sbjct: 335 LHELRRALEEGSRESGAT-----IPSFMNTIPTKETPPTLIRTNKFTEGFQNIVDAYGVG 389

Query: 118 IVKFINDSCS--------QAHILGLV------ISNTGEFCASSYKFKGFLLSLIRQMYYV 163
             + +N +           A + G                 +    +      I +M++ 
Sbjct: 390 SYREVNPALFTIITFPFLFAVMFGDFGHGFVMFLFALLLVINENHPRLNQSQEIMRMFFN 449

Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI--DLMSILQLREIGVLLTAVMIA 221
           G   + ++ L S  TG +     +  ++ FG+       +++   ++ ++   +  V   
Sbjct: 450 GRYILLLMGLFSVYTGLIYNDCFSKSVNLFGSGWNVSHRNMVLWNRVLQLDPSVPGV--- 506

Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281
                                    +G+D +  L + R+  L      ++++     +  
Sbjct: 507 -------------------FQGPYPLGIDPIWNLATNRLTFLNSFKMKMSVILGIIHMTF 547

Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327
             I+    +      F        ++  +   L         I ++
Sbjct: 548 GVILGIFNHLHFRKKFNIYL---VSVPELLFML---CIFGYLIFMI 587


>gi|284052603|ref|ZP_06382813.1| anti-sigma-factor antagonist [Arthrospira platensis str. Paraca]
 gi|291572095|dbj|BAI94367.1| anti-sigma factor antagonist [Arthrospira platensis NIES-39]
          Length = 116

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 37/94 (39%), Gaps = 2/94 (2%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
            + + + +  G   + + S+   D+   + K   + + ++D   +T +D+ G   ++  +
Sbjct: 9   SSDVQILQPQGILDATKASQFRQDISRLVEK--GAKTILIDFQDVTFMDSSGLGALVLAL 66

Query: 63  EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
           +          + +  EQ+  L   T   ++   
Sbjct: 67  KTVRAADSKLVICSINEQIRILFELTSMDRVFQP 100


>gi|320010408|gb|ADW05258.1| anti-sigma-factor antagonist [Streptomyces flavogriseus ATCC 33331]
          Length = 122

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 5/90 (5%)

Query: 2   SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
           +E    V    G         + + +  A+         +VD S +   D+ G  +++  
Sbjct: 20  TEGRSEVVTPVGELDHHTADLLREPLESAVEHGRT--RLVVDCSGLDFCDSTGLNVLLGA 77

Query: 62  M---EKYHGKIKLQGVSTHIEQLFSLISFT 88
               E   G + L G+   + ++F +    
Sbjct: 78  RLKAEAAGGAVHLAGMQPVVARVFEITGAE 107


>gi|170077903|ref|YP_001734541.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002]
 gi|169885572|gb|ACA99285.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002]
          Length = 109

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELIM 59
          +N I VF   G + + +  E  DD++ +I +  + +  ++D + IT +D+ G     L++
Sbjct: 2  DNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEE-KKEVVVLDFAGITFMDSAGLGSLVLLL 60

Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89
            +  +  K+ L  V+  ++ LF L +   
Sbjct: 61 KTVRSHGAKMILCNVNEQVQMLFELTNMNR 90


>gi|302542613|ref|ZP_07294955.1| putative anti-sigma factor antagonist [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302460231|gb|EFL23324.1| putative anti-sigma factor antagonist [Streptomyces himastatinicus
           ATCC 53653]
          Length = 143

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G TV    G      ++ +   +  A     ++   +VDL+  T  D  G  L+     
Sbjct: 42  GGYTVVALHGEIDIAGLAGVGPALDAATGA--RAPEVVVDLTPTTFFDCSGLGLLCRAHR 99

Query: 64  KYHGKIKLQGVSTHIEQLFSLIS 86
           +   +     +      +   + 
Sbjct: 100 RVAERGGRLRLVCDDPLILRTLR 122


>gi|271968770|ref|YP_003342966.1| hypothetical protein Sros_7543 [Streptosporangium roseum DSM 43021]
 gi|270511945|gb|ACZ90223.1| hypothetical protein Sros_7543 [Streptosporangium roseum DSM 43021]
          Length = 108

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61
           +G  V    G+        +A  V  ++         ++ ++ +   D+ G   ++    
Sbjct: 12  DGSRVIIPIGDLDRDAADTLATAVNESLAHPP--GRLVIQMTHVQFCDSSGIVTLLDAHA 69

Query: 62  -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96
              +   ++ L GVS H+  LF + +     +I  +
Sbjct: 70  DAAQLGTELVLAGVSDHLRALFQICALDQVVRIVEE 105


>gi|117620108|ref|YP_857041.1| anti-anti-sigma factor family protein [Aeromonas hydrophila
          subsp. hydrophila ATCC 7966]
 gi|117561515|gb|ABK38463.1| anti-anti-sigma factor family protein [Aeromonas hydrophila
          subsp. hydrophila ATCC 7966]
          Length = 106

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
               +G      + ++ D++   +N         +DL+ +  +D  GA+LI    ++  
Sbjct: 12 VTATLSGELSVITLGDLQDELFGLLN----FSVLTLDLTPLEMLDGCGAQLIAILQQEAG 67

Query: 67 GKIKLQGVSTH 77
           + K   +   
Sbjct: 68 QQGKQLRLEAA 78


>gi|56751980|ref|YP_172681.1| anti-sigma f factor antagonist [Synechococcus elongatus PCC 6301]
 gi|81300930|ref|YP_401138.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus
          elongatus PCC 7942]
 gi|56686939|dbj|BAD80161.1| similar to anti-sigma f factor antagonist [Synechococcus
          elongatus PCC 6301]
 gi|81169811|gb|ABB58151.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus
          elongatus PCC 7942]
          Length = 130

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +   +FR  G   +         +  ++    +   AI+DLS I  ID+ G   ++   
Sbjct: 26 RDDYQLFRLTGQLDAFSEPTFRKVLGKSLEDGPKH--AILDLSKIDFIDSSGLGALVQLA 83

Query: 63 EKY 65
          ++ 
Sbjct: 84 KQA 86


>gi|24213539|ref|NP_711020.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45658618|ref|YP_002704.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|24194323|gb|AAN48038.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai
          str. 56601]
 gi|45601862|gb|AAS71341.1| anti-sigma factor antagonist [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 110

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           +G+ +    G       +E+ +++   I+        I+++  +  + + G    +  +
Sbjct: 7  RDGVLIVYLKGRLDVSIANEVEENLNDLIDNQ-GHKKVILNMQEVDYMSSSGFRACISTL 65

Query: 63 EKYH---GKIKLQGVSTHIEQLFSLISFT 88
           K +   G +K+  +   ++++F +I  T
Sbjct: 66 RKLNSKEGALKISNIKPAVKRIFDVIELT 94


>gi|291453380|ref|ZP_06592770.1| anti-sigma factor antagonist [Streptomyces albus J1074]
 gi|291356329|gb|EFE83231.1| anti-sigma factor antagonist [Streptomyces albus J1074]
          Length = 124

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 5/72 (6%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           G  V   AG         +   V   + K       ++DLS +   D+ G  +++    
Sbjct: 11 GGWAVLHVAGELDLVSSPVVRQRVHDVVAK--GRHELVLDLSDVLFCDSSGVGVLIATRR 68

Query: 61 FMEKYHGKIKLQ 72
           +    G ++L 
Sbjct: 69 LIRSCQGSLRLI 80


>gi|226943417|ref|YP_002798490.1| STAS family protein [Azotobacter vinelandii DJ]
 gi|226718344|gb|ACO77515.1| STAS family protein [Azotobacter vinelandii DJ]
          Length = 102

 Score = 36.1 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
          V   +G         +      A+  +  +D  ++D SA+ +  ++G  L++ ++     
Sbjct: 13 VLALSGVLDYGTGPALRQQ-GRALIGTAGTDGLVLDCSAVEKSSSVGVSLLLAYLRDAKA 71

Query: 68 KIKLQGVSTHIEQLFSLIS 86
            K   V    E +  +  
Sbjct: 72 AGKRLQVRALPEDMCEIAQ 90


>gi|292490489|ref|YP_003525928.1| sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus halophilus Nc4]
 gi|291579084|gb|ADE13541.1| Sulfate transporter/antisigma-factor antagonist STAS
          [Nitrosococcus halophilus Nc4]
          Length = 121

 Score = 36.1 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           FR  G      + E A   +   ++++      +DL  ++  D+ G  L++ +M 
Sbjct: 12 HFRIFGELTFNTVPEAAKKGLALFDEAV--GELHIDLQEVSRTDSAGLALLITWMR 65


>gi|256377918|ref|YP_003101578.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
 gi|255922221|gb|ACU37732.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827]
          Length = 112

 Score = 36.1 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 2/82 (2%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
           V    G       S + + +  A          ++DLS++   D+ G  + +   E+  
Sbjct: 15 HVVTATGELDHRSASRLREAI--AGVPLGSGHHLVLDLSSLAFCDSSGLTVFIGAHERAE 72

Query: 67 GKIKLQGVSTHIEQLFSLISFT 88
           +     +      +  ++  T
Sbjct: 73 AEQAAFSLVGPPPPVHKMLRLT 94


>gi|297202415|ref|ZP_06919812.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
 gi|197710064|gb|EDY54098.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083]
          Length = 107

 Score = 36.1 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
                    G       ++    +  A++  +     ++DLS +   D  G  +IM   
Sbjct: 4  RGDHAELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61

Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93
           +     +   +     Q+  L+  T   +I
Sbjct: 62 RRAGRCGRRLVLRDVPAQMQRLLVATRLHRI 92


>gi|295837419|ref|ZP_06824352.1| anti-sigma-B factor antagonist [Streptomyces sp. SPB74]
 gi|302520921|ref|ZP_07273263.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
 gi|318060831|ref|ZP_07979554.1| anti-sigma-factor antagonist [Streptomyces sp. SA3_actG]
 gi|197696065|gb|EDY42998.1| anti-sigma-B factor antagonist [Streptomyces sp. SPB74]
 gi|302429816|gb|EFL01632.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78]
          Length = 117

 Score = 36.1 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    +   +VD+  +  +D+ G  +++  ++
Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNFHLVVDMEGVDFLDSTGLGVLVGGLK 72

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95


>gi|144897343|emb|CAM74207.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma
          factor) [Magnetospirillum gryphiswaldense MSR-1]
          Length = 102

 Score = 36.1 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 6/83 (7%), Positives = 24/83 (28%), Gaps = 2/83 (2%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65
                +              +   + +       +VD++ +  +D+ G  +++   ++ 
Sbjct: 11 GPTLVLSDQLLFDHRDLFEGAIDKLLARQPT--KVVVDMAGLDYMDSAGLGMLLTLRDRA 68

Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88
               L  +      +  L+   
Sbjct: 69 TRAGALVCLRNPGIDVAELLRLA 91


>gi|311030731|ref|ZP_07708821.1| anti-sigma F factor antagonist [Bacillus sp. m3-13]
          Length = 116

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 6  ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62
          +   R AG         + +     I K  Q    I++L  ++ +D+ G  +I+     +
Sbjct: 13 VLCVRLAGELDHHTAENLRNQATAIIEKH-QISHIILNLEQLSFMDSSGLGVILGRYKQI 71

Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84
          +   G++ +  +S  +++LF +
Sbjct: 72 KNNGGEMVVCSISPAVKRLFEM 93


>gi|67920337|ref|ZP_00513857.1| hypothetical protein CwatDRAFT_6580 [Crocosphaera watsonii WH 8501]
 gi|67857821|gb|EAM53060.1| hypothetical protein CwatDRAFT_6580 [Crocosphaera watsonii WH 8501]
          Length = 190

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 14/183 (7%)

Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI-----FS 199
           S  + K      +RQ+++ G+    +  ++  + G +IA      L Q G  +     + 
Sbjct: 6   SHDRDKTTWKKSVRQIFFGGLFTKYIAGILLVILGFLIATFSLEWLEQLGMGLDRIYLYL 65

Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL-DFVRILISP 258
             ++S+  L +I + ++        G  +   IG         ++ ++ L + +  + S 
Sbjct: 66  PAIVSV-CLTQIIIRISPSPRFWSRGLIVTILIGLTLRYLFWRSLSSLNLSNPIDGIFS- 123

Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318
                 ISL +L +L  FS+++   ++         A ++S+      LA IF  +IK  
Sbjct: 124 ------ISLFVLELLVIFSSVLQLYLMYHLKDRRREADYYSQQVINKPLAKIFYAMIKGY 177

Query: 319 FMA 321
           F A
Sbjct: 178 FFA 180


>gi|196035154|ref|ZP_03102560.1| anti sigma b factor antagonist RsbV [Bacillus cereus W]
 gi|196037336|ref|ZP_03104647.1| anti sigma b factor antagonist RsbV [Bacillus cereus NVH0597-99]
 gi|228913672|ref|ZP_04077299.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228926135|ref|ZP_04089211.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|228932397|ref|ZP_04095279.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228950126|ref|ZP_04112310.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|229120606|ref|ZP_04249851.1| Anti-sigma factor antagonist [Bacillus cereus 95/8201]
 gi|301052633|ref|YP_003790844.1| anti-sigma B factor antagonist [Bacillus anthracis CI]
 gi|195992218|gb|EDX56180.1| anti sigma b factor antagonist RsbV [Bacillus cereus W]
 gi|196031578|gb|EDX70174.1| anti sigma b factor antagonist RsbV [Bacillus cereus NVH0597-99]
 gi|228662891|gb|EEL18486.1| Anti-sigma factor antagonist [Bacillus cereus 95/8201]
 gi|228809549|gb|EEM55986.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|228827333|gb|EEM73085.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228833500|gb|EEM79061.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|228845960|gb|EEM90984.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|300374802|gb|ADK03706.1| anti-sigma B factor antagonist [Bacillus cereus biovar anthracis
          str. CI]
          Length = 112

 Score = 36.1 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 1  MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60
          +  +     +  G   +   S++ + ++   ++       +VD + +  +D+ G  + + 
Sbjct: 9  LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 66

Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89
           +   +K  GK++  GVS  +++LF +   T 
Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98


>gi|162451777|ref|YP_001614144.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
 gi|161162359|emb|CAN93664.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
          Length = 557

 Score = 36.1 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 5   GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61
           GI V    G   S   +++ + +V A+ +   ++  I+D++ +T +D+  A  ++     
Sbjct: 439 GILVVPLVGQMDSSRGAQLVESLVAAVERH-HAEFVIIDITGVTSVDSAVANHLLQATRA 497

Query: 62  MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
                 +  + G S  I +    +     K   ++  Q  F + 
Sbjct: 498 AGLLGAECSVVGASPSIARTVIELGIEFGKLATHRDLQAGFRHA 541


>gi|325923576|ref|ZP_08185215.1| anti-anti-sigma factor [Xanthomonas gardneri ATCC 19865]
 gi|325545938|gb|EGD17153.1| anti-anti-sigma factor [Xanthomonas gardneri ATCC 19865]
          Length = 139

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 39/110 (35%), Gaps = 5/110 (4%)

Query: 3   ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
           ++        G   S    ++   +   +  SI   + ++DL+A+  I + G   I    
Sbjct: 12  QDTRQRVILTGRLDSHTYQDLDAALSPLLGTSIV--TLVLDLTALEYISSAGIRSIFKVR 69

Query: 63  EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109
           +      GK+ +      I ++F ++       +     +   + ++ + 
Sbjct: 70  KALATHQGKLLVTNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLSAMQR 119


>gi|307824569|ref|ZP_07654794.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96]
 gi|307734553|gb|EFO05405.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96]
          Length = 103

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
           F   G+     I       + + +    +    +DLS ++  D+ G  L++ +++    
Sbjct: 13 HFVIDGDLTFATID---KQTLKSFSFLKAAKEITIDLSRVSNTDSAGLALMIEWIKYSRQ 69

Query: 68 KIKLQGVSTHIEQLFSLISFT 88
                     EQL +L   +
Sbjct: 70 NRTQLSFKNIPEQLLNLAKLS 90


>gi|300786347|ref|YP_003766638.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
 gi|299795861|gb|ADJ46236.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32]
          Length = 124

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          ++ G+   R AG       SE+ D ++ +I     +   +VDL+  T  D+    +++  
Sbjct: 14 TDAGVVTVRCAGELDLHSASELRDALLGSI--VAGARGVVVDLTQTTFCDSTVFSVLVEA 71

Query: 62 MEKYHGK 68
            +   +
Sbjct: 72 YREAAAR 78


>gi|242790006|ref|XP_002481478.1| periplasmic beta-glucosidase precursor, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218718066|gb|EED17486.1| periplasmic beta-glucosidase precursor, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 607

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-----------FKGFLLSLIRQMYYVG 164
           K  V+   ++     +LG +   T +   +  +           F G    L+  +   G
Sbjct: 325 KAAVQAAKEAGLAVLMLGSLSVITADPLFNERRDGEFFTHADLGFPGRQQDLLDAILATG 384

Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224
           V  V ++             Q    L  F    ++ D +  +   E+       +   +S
Sbjct: 385 VPTVVILSGGQAFVLNDHTLQSNAILHSFLGGEYTTDALVEILTGEVNPSGKLTISMPQS 444

Query: 225 GSAI 228
            S I
Sbjct: 445 SSTI 448


>gi|330447005|ref|ZP_08310655.1| anti-anti-sigma factor family protein [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
 gi|328491196|dbj|GAA05152.1| anti-anti-sigma factor family protein [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
          Length = 103

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 35/88 (39%), Gaps = 5/88 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S N +        + +    E+  +    I    +    ++D++ +  ID+ G   I++ 
Sbjct: 4  SSNSVIALALHDEFDAQRAKELEKEFD--ILSQTERMELVIDMTKVQFIDSCGIGAIVFL 61

Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLIS 86
           ++      +++L  V+    +L  ++ 
Sbjct: 62 YKRLKSRGRRLRLLNVNGQPRELMQMLR 89


>gi|284992075|ref|YP_003410629.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM
          43160]
 gi|284065320|gb|ADB76258.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM
          43160]
          Length = 116

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55
          G       G         +A+     +++  Q    +VDL+  T +D+ GA
Sbjct: 12 GRPALTVRGELDIATAPHLAEAFESQLSQQPQ--CLVVDLTDTTFMDSSGA 60


>gi|197302660|ref|ZP_03167714.1| hypothetical protein RUMLAC_01390 [Ruminococcus lactaris ATCC
           29176]
 gi|197298242|gb|EDY32788.1| hypothetical protein RUMLAC_01390 [Ruminococcus lactaris ATCC
           29176]
          Length = 710

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            G+ V+RF+ N     ++ +  D+   + K   + + I+D S I  ID   A+ +    E
Sbjct: 446 EGVLVYRFSSNLFFANVNILQQDIEAELEKKKGTKAVILDASGIGSIDITAADRLAILYE 505

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFT 88
               +     ++ HI  L   +   
Sbjct: 506 ALKEQGIRFYITEHIADLNEQMRKL 530


>gi|302874982|ref|YP_003843615.1| anti-sigma-factor antagonist [Clostridium cellulovorans 743B]
 gi|307690401|ref|ZP_07632847.1| anti-sigma-factor antagonist [Clostridium cellulovorans 743B]
 gi|302577839|gb|ADL51851.1| anti-sigma-factor antagonist [Clostridium cellulovorans 743B]
          Length = 127

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60
           +   +    G        E+   +   ++      + I+D + I+ +D+ G   ++    
Sbjct: 25  DKTLIATLVGELDHHSSEEVRAKIDDKLDNE-NYVNLIMDFNGISFMDSSGIGAVIGRYK 83

Query: 61  FMEKYHGKIKLQGVSTHIEQLFSL 84
            +E+ +GK+ +  V+ +I+++F L
Sbjct: 84  KLERKNGKVIITNVNANIKRIFDL 107


>gi|167630653|ref|YP_001681152.1| anti-sigma factor antagonist [Heliobacterium modesticaldum Ice1]
 gi|167593393|gb|ABZ85141.1| anti-sigma factor antagonist [Heliobacterium modesticaldum Ice1]
          Length = 101

 Score = 36.1 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 2  SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61
          S N       AG+    + +E+ + ++   +K  +     +D+  +  ID+ G  +++  
Sbjct: 7  SSNNQVSVTLAGSILVTDAAELREKLLKYADK--EGVQFHIDMQRVEFIDSSGLGVLVTV 64

Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTH 89
          +++     G + ++G+   ++++F L     
Sbjct: 65 LKRSRQKGGDVIIKGIHGVVKEVFELTRLNR 95


>gi|324999727|ref|ZP_08120839.1| hypothetical protein PseP1_13211 [Pseudonocardia sp. P1]
          Length = 126

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 27/72 (37%)

Query: 5  GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64
          G+ + R +G    P ++ +   +             +VD++ +TE D    E +   + +
Sbjct: 27 GVRLVRVSGRLDGPGVAALGRLLDAQRACGRVPAHLVVDVTGVTEFDGTAVETLGSLVGR 86

Query: 65 YHGKIKLQGVST 76
            G      ++ 
Sbjct: 87 TRGGAVHTHLAG 98


>gi|91794643|ref|YP_564294.1| Sulfate transporter/antisigma-factor antagonist STAS [Shewanella
           denitrificans OS217]
 gi|91716645|gb|ABE56571.1| Sulfate transporter/antisigma-factor antagonist STAS [Shewanella
           denitrificans OS217]
          Length = 104

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           + ++  +  G        E+   ++  +N S    S  +DLS +TEID  G +L++   +
Sbjct: 8   DNLSQAQIEGAMTIHNAFELKGQLMQVLNFS---HSLELDLSTVTEIDGAGLQLLIMAKQ 64

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102
           +         +  H + +   +         N     + 
Sbjct: 65  QQARAHLELTLIHHSDAVVEAMELMGLVSWFNDPVIMAR 103


>gi|326203395|ref|ZP_08193260.1| anti-sigma-factor antagonist [Clostridium papyrosolvens DSM 2782]
 gi|325986653|gb|EGD47484.1| anti-sigma-factor antagonist [Clostridium papyrosolvens DSM 2782]
          Length = 105

 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 7/66 (10%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62
          + G      +G           +++   +     +    +D   +T ID+ G  +++  +
Sbjct: 13 DGGKCQIILSGEIDIHTSQNFKNELNEVVKS--CNGDLYIDCKELTYIDSTGLGILVGAL 70

Query: 63 EKYHGK 68
          ++   +
Sbjct: 71 KEVRKE 76


>gi|85058187|ref|YP_453889.1| putative anti-sigma-B factor antagonist [Sodalis glossinidius
          str. 'morsitans']
 gi|84778707|dbj|BAE73484.1| putative anti-sigma-B factor antagonist [Sodalis glossinidius
          str. 'morsitans']
          Length = 102

 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/80 (12%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 8  VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67
               G      +  +       +          +D+S +  +D+ G  L+++F      
Sbjct: 13 TLILHGELDRDTLLTLWQQRQPLLE-----GIRFLDVSNLRRVDSAGVALMLHFYHYQQQ 67

Query: 68 KIKLQGVSTHIEQLFSLISF 87
          +     ++   ++L +LI+ 
Sbjct: 68 RGATLALTGVTDRLRTLIAL 87


>gi|294086095|ref|YP_003552855.1| anti-anti-sigma regulatory factor [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665670|gb|ADE40771.1| Anti-anti-sigma regulatory factor [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 236

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 38/118 (32%), Gaps = 6/118 (5%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             I +   +G+      S++ +D+V  I      +   +D + +T ID+ G  +++   +
Sbjct: 9   GDIAMLTLSGDVDLQTTSDMKNDIVDII----GINQLDIDAADVTYIDSSGIAVLLLARQ 64

Query: 64  KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121
                       T    ++ ++     K        +   +          G+ +   
Sbjct: 65  HCLQNNITINFMTASSAIYRVLQMA--KLETILPIAKVIDHAEDTGALGIGGEGVFSA 120


>gi|162454601|ref|YP_001616968.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
 gi|161165183|emb|CAN96488.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56']
          Length = 350

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 4   NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
           +GI      G   +   + I + ++ AI    Q++  I+D++ +  +D  GA  +   + 
Sbjct: 213 DGILALPLIGQIDAERAARILEVLLQAI-VDTQAEHVIIDVTGVPFMDAEGARHLRDTVR 271

Query: 64  K---YHGKIKLQGVSTHIEQLF 82
                  +  + G+S  + +L 
Sbjct: 272 ASSLLGAQCVIAGISPAMARLL 293


>gi|29830386|ref|NP_825020.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680]
 gi|29607497|dbj|BAC71555.1| putative anti-sigma factor antagonist [Streptomyces avermitilis
          MA-4680]
          Length = 126

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 5/73 (6%)

Query: 3  ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59
               V + AG         +   V  A+       S ++DLS +   D+ G  +++   
Sbjct: 12 RGDWAVLQVAGEMDLMTSPVMRQRVHDAVAD--GHRSLVLDLSEVLFCDSSGVGVLIATR 69

Query: 60 YFMEKYHGKIKLQ 72
            +    G+++L 
Sbjct: 70 RLIRSCQGRLRLI 82


>gi|114321563|ref|YP_743246.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227957|gb|ABI57756.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1]
          Length = 112

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 31/99 (31%), Gaps = 4/99 (4%)

Query: 7   TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66
            V    G +       +      A       ++  VDL     +D+    +++   E   
Sbjct: 14  LVLEIQGRFDFG----LHKPFRRAYRGRAGLETYRVDLRQAESMDSSALGMLLLLREHAS 69

Query: 67  GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105
           G+     +    E++  ++   + +K+   +   +    
Sbjct: 70  GQGARVVLRHCQEEVDEILRTANFQKLFEIERSPAPPRP 108


>gi|302185302|ref|ZP_07261975.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas
          syringae pv. syringae 642]
          Length = 101

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 9  FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68
           R  G        ++      A+ KS       +D S + +  ++G  L++ FM      
Sbjct: 14 LRLIGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDARDA 72

Query: 69 IKLQGVSTHIEQLFSLIS 86
           K   V +  E +  +  
Sbjct: 73 GKSMTVRSLPEDMRQIAR 90


>gi|21222799|ref|NP_628578.1| anti anti sigma factor [Streptomyces coelicolor A3(2)]
 gi|256786127|ref|ZP_05524558.1| anti anti sigma factor [Streptomyces lividans TK24]
 gi|289770022|ref|ZP_06529400.1| anti sigma factor [Streptomyces lividans TK24]
 gi|10178381|emb|CAC08419.1| putative anti anti sigma factor [Streptomyces coelicolor A3(2)]
 gi|289700221|gb|EFD67650.1| anti sigma factor [Streptomyces lividans TK24]
          Length = 126

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 7  TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63
           V + +G         +   V   + +     S ++DLS +   D+ G  +++     + 
Sbjct: 16 AVLQVSGELDLVTSPVLRQRVHDEVAE--GRHSLVLDLSDVLFCDSSGVGVLIASRRLIR 73

Query: 64 KYHGKIKLQ 72
             G+++L 
Sbjct: 74 SCQGRLRLI 82


>gi|332140256|ref|YP_004425994.1| STAS domain protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550278|gb|AEA96996.1| STAS domain protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 102

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 1  MSENGITVFRFAGNWKSPEISEI-ADDVVMAINKSI-QSDSAIVDLSAITEIDTIGAELI 58
          +++ G  V    G+     +S+   + +  +   ++ Q+    VDLS +   D+ G   +
Sbjct: 6  VNDKGDVVVH--GHLDRDTLSKNFWESLASSERNTLVQNQRCSVDLSDVERADSAGLAWL 63

Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLIS 86
          +  +           +    E+L  L  
Sbjct: 64 INAVRDAKQNGVSITLHKMPEKLHKLAK 91


>gi|163847045|ref|YP_001635089.1| anti-anti-sigma factor [Chloroflexus aurantiacus J-10-fl]
 gi|222524868|ref|YP_002569339.1| anti-sigma-factor antagonist [Chloroflexus sp. Y-400-fl]
 gi|163668334|gb|ABY34700.1| anti-anti-sigma factor [Chloroflexus aurantiacus J-10-fl]
 gi|222448747|gb|ACM53013.1| anti-sigma-factor antagonist [Chloroflexus sp. Y-400-fl]
          Length = 112

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 10/86 (11%), Positives = 26/86 (30%), Gaps = 2/86 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
            + V    G   +  +  +   +  A          +VDLS  T +D+     ++  ++
Sbjct: 9  GNVAVLAITGRLDANTVPPVQQWLEQATGA--PGARVLVDLSETTFVDSTALATLVSALK 66

Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89
          +         +      +  +   T 
Sbjct: 67 RCQQGQGEFALCGLRRPVLMIFELTR 92


>gi|139438601|ref|ZP_01772117.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC
           25986]
 gi|133776140|gb|EBA39960.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC
           25986]
          Length = 464

 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 10/165 (6%)

Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225
               ++ +   ++    A Q      + G  +  +  +S          L A+   G SG
Sbjct: 57  QSTDIIQVALILSAIDTALQAFAPFRRIGGGLPIVMGVSFA-------FLPALQAMGASG 109

Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285
            +  A +G   +   +  +  +    ++ L  P +   +I    +++       +   + 
Sbjct: 110 FSFGALLGGEIVGGAVAVLFGLAYSKIKWLFPPVVTGTVIFSIGVSLYPTAVKYMAGGMG 169

Query: 286 IWKYY-DIPFAVFFSRFHSTATLANIFTGLIK--APFMACAIGIV 327
              +     + V    F     LAN   G +K  + F    +G++
Sbjct: 170 TPLWGTPQAWCVALITFAVVFALANFGKGTLKLGSVFFGMIVGMI 214


>gi|21221968|ref|NP_627747.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)]
 gi|256786945|ref|ZP_05525376.1| anti-sigma factor antagonist [Streptomyces lividans TK24]
 gi|289770839|ref|ZP_06530217.1| anti-sigma-B factor antagonist [Streptomyces lividans TK24]
 gi|7227941|sp|Q9WVX8|RSBV_STRCO RecName: Full=Anti-sigma-B factor antagonist; AltName:
          Full=Anti-anti-sigma-B factor
 gi|4835880|gb|AAD30281.1|AF134889_1 putative anti-anti-sigma factor BldG [Streptomyces coelicolor]
 gi|4539567|emb|CAB38486.1| putative anti-sigma factor antagonist [Streptomyces coelicolor
          A3(2)]
 gi|289701038|gb|EFD68467.1| anti-sigma-B factor antagonist [Streptomyces lividans TK24]
          Length = 113

 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


>gi|318079149|ref|ZP_07986481.1| anti-sigma-factor antagonist [Streptomyces sp. SA3_actF]
          Length = 108

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    +   +VD+  +  +D+ G  +++  ++
Sbjct: 6  GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNFHLVVDMEGVDFLDSTGLGVLVGGLK 63

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 64 RVRAHEGSLRLVCNQERILKIFR 86


>gi|297530171|ref|YP_003671446.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3]
 gi|297253423|gb|ADI26869.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3]
          Length = 141

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 12/119 (10%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 9   FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65
            +  G             +  A+   ++    +VD+S +  +D+ G  L++ F ++    
Sbjct: 21  IKLTGRLAYDTQLAAEQKLATAVAA-VKRCLVVVDVSGLRFLDSTGLALLVRFFKQIVSE 79

Query: 66  HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124
              + +        +   L++   R        Q+        +  +   + +      
Sbjct: 80  SRAMAIVVRDNAAIEKILLMAKLDRLLPIVGDEQQLLSLAPPSSFDHISQEALYSAWRQ 138


>gi|290958526|ref|YP_003489708.1| anti-anti-sigma factor BldG [Streptomyces scabiei 87.22]
 gi|329939418|ref|ZP_08288754.1| anti-anti-sigma factor BldG [Streptomyces griseoaurantiacus M045]
 gi|260648052|emb|CBG71160.1| anti-anti-sigma factor BldG [Streptomyces scabiei 87.22]
 gi|329301647|gb|EGG45541.1| anti-anti-sigma factor BldG [Streptomyces griseoaurantiacus M045]
          Length = 113

 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 4  NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63
             TV    G        ++ + +V  +N    S   +VD+  +  +D+ G  +++  ++
Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68

Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86
          +         +  + E++  +  
Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.316    0.142    0.377 

Lambda     K      H
   0.267   0.0433    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,222,945,451
Number of Sequences: 13984884
Number of extensions: 163593599
Number of successful extensions: 915358
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 2403
Number of HSP's successfully gapped in prelim test: 7748
Number of HSP's that attempted gapping in prelim test: 906604
Number of HSP's gapped (non-prelim): 13283
length of query: 373
length of database: 4,792,584,752
effective HSP length: 140
effective length of query: 233
effective length of database: 2,834,700,992
effective search space: 660485331136
effective search space used: 660485331136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 82 (36.1 bits)