BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] (373 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|254780138|ref|YP_003064551.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] gi|254039815|gb|ACT56611.1| ABC transporter [Candidatus Liberibacter asiaticus str. psy62] Length = 373 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 373/373 (100%), Positives = 373/373 (100%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY Sbjct: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK Sbjct: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA Sbjct: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE Sbjct: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR Sbjct: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII Sbjct: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 Query: 361 DSLFAIFYFAIGI 373 DSLFAIFYFAIGI Sbjct: 361 DSLFAIFYFAIGI 373 >gi|209964745|ref|YP_002297660.1| ABC transporter, permease protein, putative [Rhodospirillum centenum SW] gi|209958211|gb|ACI98847.1| ABC transporter, permease protein, putative [Rhodospirillum centenum SW] Length = 384 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 124/371 (33%), Positives = 195/371 (52%), Gaps = 5/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V G W + + + + S +DLS + +DT GA LI Sbjct: 19 EEDQWVLAAGGRWDLSAVPRLDQRL-RTAGPDRPASSVCIDLSGLVALDTAGALLIDRLA 77 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 E+ + + L +L+ R + Y +L +G+ V+ Sbjct: 78 ERLRAEGHTVAIVGARPDLCALLREVRRASRADSPA--LPRYEPMHDLLERVGRATVEAG 135 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D+ LG+V +F+ + + VG++ +P+V L+SF+ G V+ Sbjct: 136 QDAAKLLGFLGMVTVTALRLVRQPRRFRM--TPFVFHLEQVGLNALPIVGLLSFLIGIVL 193 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL FGAEIF ++L+ I LREIG+L+T++++AGRSGSA A+IG+MK+N+E+D Sbjct: 194 AYQGADQLRLFGAEIFVVNLLGIGVLREIGILMTSIIVAGRSGSAFTAQIGTMKVNQEVD 253 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+GLD V +L+ PR+ AL+++LPLL AN A+ G +++ + Y DI F F + Sbjct: 254 AMRTLGLDPVELLVLPRLLALMVALPLLGFYANVVALFGGAVMAYSYLDITFGQFLKQLQ 313 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +F GL+KAP A I +V EG V + S+G+ T VV SI +VI++D+ Sbjct: 314 LAVNETTLFVGLVKAPVFAIVIALVGCYEGLRVTGSAQSVGQLTTRSVVVSIFLVIVLDA 373 Query: 363 LFAIFYFAIGI 373 LF+I + +GI Sbjct: 374 LFSILFSYLGI 384 >gi|92117460|ref|YP_577189.1| hypothetical protein Nham_1921 [Nitrobacter hamburgensis X14] gi|91800354|gb|ABE62729.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14] Length = 388 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 135/372 (36%), Positives = 206/372 (55%), Gaps = 4/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S R G+W + + + + ++ S +D+S ++E+DT+GA L+ Sbjct: 21 SRGDALELRPDGSWIAANVIALETLADAVAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 80 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + V E LI N P ++ N IG+ Sbjct: 81 SRRVASADHPVEVVGVSENYAGLIEEVRHVNRHNPPPPKAR--NPVIAKVEEIGRSAWGS 138 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +LG + + L SL+ Q+Y VG +P+++LI+F+ GA+ Sbjct: 139 REDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGAI 196 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEI Sbjct: 197 IAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEI 256 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD V +LI PR+ AL+ +LP+LT + + +A+ G +V W Y + ++F +R Sbjct: 257 DALSTMGLDPVVVLILPRVLALVSALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIARL 316 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H ++ + G+IKAPFMA IGIVA EG V + SLGK+ TT VV+SI +VI++D Sbjct: 317 HDAVSVTHFEVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVLD 376 Query: 362 SLFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 377 GLFAVFFASIGM 388 >gi|83858858|ref|ZP_00952380.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] gi|83853681|gb|EAP91533.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] Length = 384 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 5/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G+W + + I ++DLS + IDT GA ++ + Sbjct: 19 DGARLIVEPKGDWLMEAVGRFDRRLRR-IESETDPKDLVIDLSGLGRIDTAGAYVLGRTL 77 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + + ++ ++ + + + IG+ + + Sbjct: 78 SRCREPDADRHFIGEHQTARRMMGEMLQRLADCPEDEIQPR--GVISTLARIGQGVEDGL 135 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ G + + K + S I M GV +P++ ++SF GAV+ Sbjct: 136 KETVESFAFFGRTFTTGLSVLVNPTKMR--WTSTIHLMETAGVDALPIISVLSFFIGAVV 193 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L FGA +F++DL+ I LRE GV++TA+++AGRS SA A IGSMK+ +EID Sbjct: 194 AFMGASLLETFGASVFTVDLVGIAVLREFGVIITAILLAGRSDSAFTAAIGSMKMQQEID 253 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MGLD +L+ PR+ A ++ PLLT+ A + + G +V W DI F +R + Sbjct: 254 AMKVMGLDPYEVLVLPRVIACVVMAPLLTLSAMVAGVFGGMLVSWMTLDISPNFFLTRLN 313 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T L + G+ KAP I IV + G VG SLGK+VTT VVQ+I VI+ID+ Sbjct: 314 DTIDLKHFLVGMSKAPVFGLVIAIVGCRHGLQVGGDVESLGKRVTTSVVQAIFAVIVIDA 373 Query: 363 LFAIFYFAIGI 373 LFA+ Y + I Sbjct: 374 LFAMMYLELDI 384 >gi|119945392|ref|YP_943072.1| hypothetical protein Ping_1681 [Psychromonas ingrahamii 37] gi|119863996|gb|ABM03473.1| hypothetical protein DUF140 [Psychromonas ingrahamii 37] Length = 383 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 110/375 (29%), Positives = 187/375 (49%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60 + +G +FR G+W + + + + + S D+S + ++D+ G L ++ Sbjct: 16 NNSGSILFRCQGDWTAKALQNVLRYLEKEAGILF-NMSVQWDVSGVGKVDSAGIMLYIHY 74 Query: 61 --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ H ++L G + + L+ L+ R + Q + + +IGK Sbjct: 75 HDLLKLQHCTVELTGARSEYQNLYQLL----RSHVSQQAVSKPGLLSRLLLPFTNIGKST 130 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 D +G + + S+++ + GV +P+V L S + Sbjct: 131 ENLWRDINDFLTFIGEHSAALLTSLRHPSSIRY--ASIVKNIEEAGVRALPIVALTSCLI 188 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G VI Q A QL +FGA IF +D++ I RE+ L+TA+++AGR+GS+ A++G+M I Sbjct: 189 GVVITYQSALQLQKFGANIFIVDMIGISVTRELAPLITAIVVAGRTGSSYTAQLGAMTIT 248 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEI A+RTMG + R L+ PRI AL+I +PLL + A+ I G IV + +I +A F Sbjct: 249 EEISAMRTMGFEPHRFLVLPRIIALMIVMPLLILFADVIGIAGGMIVSNIHLNISYAEFI 308 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R + +++ GL K PF A I I GF V ++ SLG+ T VV +I +VI Sbjct: 309 HRLQHVLDIKHLWIGLFKGPFFAWLIAITGCFRGFQVASNTESLGRYTTISVVNAIFLVI 368 Query: 359 IIDSLFAIFYFAIGI 373 D+LF++ + +G+ Sbjct: 369 ACDALFSVIFTELGL 383 >gi|152992948|ref|YP_001358669.1| ABC transporter, permease [Sulfurovum sp. NBC37-1] gi|151424809|dbj|BAF72312.1| ABC transporter, permease [Sulfurovum sp. NBC37-1] Length = 367 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 115/363 (31%), Positives = 183/363 (50%), Gaps = 18/363 (4%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK--IK 70 G W + EI + + S + DLS + D+ G L M + +K K ++ Sbjct: 21 GEWTLATVPEIEKE----LKGIPMGKSVLWDLSGVEAFDSAGVLLFMEYYDKLKQKNAVE 76 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 L G S ++++ L+ +K+ +K + +GK + + D Sbjct: 77 LVGYSESQKEMYDLLRKHMIEKVPERK----------TSFFEELGKSTLVVLGDIKDLIT 126 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 LG + + ++ +++ G + + ++ L SF+ G VIA QGA QL Sbjct: 127 FLGHLFFTLFNVLFHPRNIRI--KEMVYHIHHSGFNALMIIGLTSFLVGMVIAYQGAVQL 184 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 ++FGA+IF +D + I +RE+G L+TA++IAGRSGSA AEIG+MKI EEI A+RTMG D Sbjct: 185 AKFGADIFIVDTVGISMVRELGPLMTAIVIAGRSGSAYTAEIGAMKITEEIAAMRTMGFD 244 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 L+ PRI+ALI++LPLL ++ I G + +I A F R + + + Sbjct: 245 PYNFLVMPRIFALIVALPLLIFFSDIMGIFGGMVASQMELNISMAQFVDRLNEVLEVKHY 304 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+IK P A I + GF V ++ SLG + T VV SI +VI D+LF++ Y Sbjct: 305 ILGMIKGPVFAFVIAAIGCFRGFQVSDNTESLGLQTTASVVNSIFLVIAFDALFSVIYTE 364 Query: 371 IGI 373 + + Sbjct: 365 LNL 367 >gi|292490603|ref|YP_003526042.1| hypothetical protein Nhal_0469 [Nitrosococcus halophilus Nc4] gi|291579198|gb|ADE13655.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4] Length = 380 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 184/371 (49%), Gaps = 10/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + R G W IS++ + + VD S IT++DT GA L+ + Sbjct: 20 DPATSTLRCLGTWTLYGISQLEQTLPL---SQSHPPVHAVDASGITQMDTGGAWLLQRLL 76 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + ++ L+ Q + IG+ + Sbjct: 77 ADLEQQTRPIPCKGLGQEQQKLLRLVQGGSTSQQLTTAPPP-----GILERIGRLSWAHV 131 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ S +G + A + + + + G++ +P+V L+ F+ G V+ Sbjct: 132 EEALSFLAFIGETLLYFLRSMAHPSRIR--WRPFLSNLQTAGINALPIVGLLIFLVGVVL 189 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG QL +GA IF ++L+++ +RE+ L+ A++IAGR+GSA A+IG+M++ EEID Sbjct: 190 AYQGGIQLRAYGANIFIVELVTLTMVRELAPLMAAIIIAGRTGSAFTAQIGTMQVTEEID 249 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ P+I+AL+++LPLLT+ A+ I G ++ ++ F F R Sbjct: 250 ALRTLGIPPMEQLVLPKIFALVLALPLLTVFADMVGIFGGMVMSQALLEVEFREFAQRIP 309 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L++ G+ KAP A I V +GF VG + S+G+ TT VVQ+I +VII D+ Sbjct: 310 EVVPLSSFLIGVGKAPVFAVIIATVGCYQGFRVGGGAESVGRHTTTSVVQAIFLVIIADA 369 Query: 363 LFAIFYFAIGI 373 F+I + +GI Sbjct: 370 TFSILFSWLGI 380 >gi|209885947|ref|YP_002289804.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] gi|209874143|gb|ACI93939.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] Length = 377 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 142/370 (38%), Positives = 213/370 (57%), Gaps = 5/370 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G AG+W + ++S + V A + + + +D+SA+ EIDTIGA L+ + Sbjct: 13 DGRAQMYAAGSWTASQVSALEPAVEAATRTASGARALQLDMSAVNEIDTIGAWLLERMIR 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 E+ LI + P N Y IG+ V + Sbjct: 73 HARQAGSEIKTVGISERFAGLIEELRSANL---NPPVYEKQNPLLLKLYQIGQSTVSSLQ 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +LG + + + + L S I Q++ VG VP+++LI+F+ GA+IA Sbjct: 130 ELLIFIDMLGRLGTVLARVILHPRRLR--LTSTIYQLHKVGWQAVPIIVLITFLIGAIIA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG F +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEIDA Sbjct: 188 QQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + TMGLD + +LI PR+ ALII+LP+LT + + +A+ G ++ W Y D+ A F +R H Sbjct: 248 LTTMGLDPLEVLILPRVIALIIALPILTFIGSIAALYGGGLISWLYGDMMPATFIARLHE 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ + GLIKAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D L Sbjct: 308 AVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGL 367 Query: 364 FAIFYFAIGI 373 FA+F+ +IG+ Sbjct: 368 FAVFFASIGM 377 >gi|39937024|ref|NP_949300.1| hypothetical protein RPA3963 [Rhodopseudomonas palustris CGA009] gi|192292851|ref|YP_001993456.1| hypothetical protein Rpal_4485 [Rhodopseudomonas palustris TIE-1] gi|39650881|emb|CAE29404.1| putative permease of ABC transporter [Rhodopseudomonas palustris CGA009] gi|192286600|gb|ACF02981.1| protein of unknown function DUF140 [Rhodopseudomonas palustris TIE-1] Length = 383 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 130/373 (34%), Positives = 198/373 (53%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ +G+W + + V A + +D+S I +DT GA LI Sbjct: 16 IARGEGLALCASGSWTARFAPALERLVTEAEQLGGSKPNVSIDVSGIARLDTFGAWLIER 75 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ + +P+ S + +G+ I Sbjct: 76 LRRNLGQDGTEARIAGLSTNYASLVDEVRQVSEAGPEPR---RGGSLRAPIERLGRTIYA 132 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 FI+D + ++G V++ F+ L S + + V VP+++LI+F+ G Sbjct: 133 FIDDIVALISMMGAVLAGVLRVVVRPTSFR--LTSTVHHLEQVCWRAVPIIVLITFLIGC 190 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA++F +D++ +L LREIGVLL ++M+AGRSGSA AE+GSMK+ EE Sbjct: 191 IIAQQGIFHFRKFGADVFVVDMLGVLVLREIGVLLVSIMVAGRSGSAYTAELGSMKMREE 250 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +LI PR+ AL++++P+LT L SA+ G +V W Y + F R Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMSALYGGGLVAWMYGGVDPEAFLLR 310 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IGIVA EG AV + SLG T VV+SI VI++ Sbjct: 311 LRDAISIDHFTVGMIKAPVMAVVIGIVACVEGLAVQGSAESLGSHTTASVVKSIFFVIVM 370 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ IGI Sbjct: 371 DGVFAIFFAGIGI 383 >gi|115523755|ref|YP_780666.1| hypothetical protein RPE_1737 [Rhodopseudomonas palustris BisA53] gi|115517702|gb|ABJ05686.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisA53] Length = 382 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 200/371 (53%), Gaps = 4/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G+ R G+W + + + +DL+ + EIDT+GA L+ Sbjct: 16 DAGVLQLRPGGSWTAGNAVVLERLFEEVSPQLQGVRGLRIDLAGVQEIDTLGAWLLEKMS 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + + E+ LI + P N +G+ Sbjct: 76 RRAAQQGVSSELVGVDERHAGLIDEVRQVNRNAPAPH--PRGNFVLGWLDQLGRLTWASR 133 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +LG + + L SL Q+Y VG +P+++LI+F+ GA+I Sbjct: 134 VEVLVFLQMLGALAVALLGVLRRPRSLR--LTSLFYQVYRVGWQAIPIMLLITFLIGAII 191 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEID Sbjct: 192 AQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEID 251 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TM LD V +LI PR+ ALII+LP+L+ L + +A+ G +V W Y + +F +R H Sbjct: 252 ALSTMDLDPVEVLILPRVLALIIALPILSFLGSMAALYGGGLVAWFYGGMSPTIFIARLH 311 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + G+IKAPFMA IGIVA EG V + SLG++ TT VV+SI VI++D Sbjct: 312 EAVSVTHFEVGIIKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFCVIVLDG 371 Query: 363 LFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 372 LFAVFFASIGM 382 >gi|209884491|ref|YP_002288348.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] gi|209872687|gb|ACI92483.1| ABC transporter permease protein [Oligotropha carboxidovorans OM5] Length = 378 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 198/371 (53%), Gaps = 6/371 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMYFM 62 R AG W + V ++ + ++D+S ++ +DT GA LI Sbjct: 13 GAGVALRAAGEWTVHHAPALEKLVEHTERAGKSRNAALVIDVSQVSRLDTFGAWLIERLR 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ SL+ R K +P+ +F +G+ +V+ Sbjct: 73 RAQIRGDVAPPIAGLSADYASLVEEVKRVKAPPVQPRPAF---GPIRAVEAVGRSVVEVG 129 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 S +++G V+ F+ S I + V VP+V+LI+F+ G +I Sbjct: 130 QTLLSLLNMMGSVLHALWRVILHPSHFR--FTSTIHHLEQVCWRAVPIVLLITFLIGCII 187 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG FQ +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSM++ EE+D Sbjct: 188 AQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVD 247 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RTMG D +LI PRI ALII++P+L L +A+ G + W Y + F +R Sbjct: 248 ALRTMGFDPTEVLILPRILALIIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLARLR 307 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + GL+KAPFMA IGI+A EG AV + SLG+ T VV+SI VI++D Sbjct: 308 EAISINHFTVGLVKAPFMALIIGIIACVEGAAVRGSAESLGQHTTASVVKSIFFVIVVDG 367 Query: 363 LFAIFYFAIGI 373 +FAIF+ +IG+ Sbjct: 368 IFAIFFASIGV 378 >gi|154248034|ref|YP_001418992.1| hypothetical protein Xaut_4113 [Xanthobacter autotrophicus Py2] gi|154162119|gb|ABS69335.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2] Length = 474 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 133/372 (35%), Positives = 199/372 (53%), Gaps = 7/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S++ G W S E+ V +DLSA+ +DT GA L Sbjct: 110 SQDDRLTVAGRGAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERL 169 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + G V + LI R + P + + G + V Sbjct: 170 KRSWKGTGVEPQVKGLAPRYKVLIEEMGRMGQEQPPPA-----RRHEAILERFGHETVNV 224 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ + + +G ++ G F+ +++ QM VG+ VP+++LI+F+ G + Sbjct: 225 AADAAALLNFVGASVAAMGRVLLRPRSFR--FTAMVNQMDRVGLRAVPIIVLITFLIGCI 282 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +AQQG F +FGA+I+ +D++ +L LRE+GVL+ A+MIAGRSGSA AE+GSM++ EEI Sbjct: 283 LAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEI 342 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG D V +L+ PR+ ALII+LPLLT + + S+++GA +V W Y I VF R Sbjct: 343 DALRVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRL 402 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + G+IKAPFMA IGIVA EG VG + SLG T VV++I +VI++D Sbjct: 403 KGAIDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMD 462 Query: 362 SLFAIFYFAIGI 373 +FA+F+ AI + Sbjct: 463 GVFAMFFAAIDM 474 >gi|288962789|ref|YP_003453083.1| ABC transport system permease protein [Azospirillum sp. B510] gi|288915055|dbj|BAI76539.1| ABC transport system permease protein [Azospirillum sp. B510] Length = 401 Score = 275 bits (704), Expect = 7e-72, Method: Composition-based stats. Identities = 119/372 (31%), Positives = 196/372 (52%), Gaps = 5/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E+G AG W E++ A D + + +DLS + +DT+GA L+ Sbjct: 35 AEDG-WRIAAAGRWTL-EVAAAASDALDHAAPPRDGAALRLDLSGVEALDTVGAYLLSRQ 92 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + V + +L P ++ ++ G+ V Sbjct: 93 ADRMAADGRAVEVVGVRPEHAALFDAVRDAGKAPPHPIE-REHHPIHDMVVRTGETTVHA 151 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LGLV + + L S++ + G++ +P++ L+SF+ G V Sbjct: 152 AREVLDLVGFLGLVTVTFVRLILRPSRLR--LTSVLFHIEQTGLNALPILGLLSFLIGVV 209 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A QGA QL +FGAE++ ++L+ I LREIG+L+TA+++AGRSGSA A+IG+MK+N+E+ Sbjct: 210 LAFQGADQLKRFGAELYVVNLLGISVLREIGILMTAIIVAGRSGSAFTAQIGTMKVNQEV 269 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DAI TMGLD V +L+ PR AL+I+LPLL A+ + G +++ + DI F F + Sbjct: 270 DAIGTMGLDPVELLVVPRALALVITLPLLAFYADVMGLFGGAVMAYATLDITFGQFIRQL 329 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 HS + + GLIKAP A I +V EG V + S+G T VV+ I +VI+ID Sbjct: 330 HSAIGINTVLAGLIKAPVFALVIAMVGCYEGLKVSGSAESVGIMTTKAVVEGIFLVIVID 389 Query: 362 SLFAIFYFAIGI 373 ++F++ + +G+ Sbjct: 390 AVFSVLFSLLGV 401 >gi|85716130|ref|ZP_01047106.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A] gi|85697129|gb|EAQ35011.1| ABC transporter permease protein [Nitrobacter sp. Nb-311A] Length = 370 Score = 275 bits (703), Expect = 9e-72, Method: Composition-based stats. Identities = 136/373 (36%), Positives = 214/373 (57%), Gaps = 8/373 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S R G W + ++ + A + ++ S +D+S ++E+DT+GA L+ Sbjct: 5 SRGDALELRPDGFWIAANVTVLEALADAAAPQVERAKSLKMDMSGLSELDTLGAWLLEKL 64 Query: 62 MEKYHG-KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G ++ GVS + L + +R + K + N +G+ Sbjct: 65 SRQIAGHPAEIVGVSENYAGLIEEVRHVNRHNLPPPKAR-----NPVIAKVEEVGRAAWN 119 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D +LG + + L SL+ Q+Y VG +P+++LI+F+ GA Sbjct: 120 SREDVAVFLQMLGSLCVALLGIIRKPRSLR--LTSLVYQLYRVGWQAIPIILLITFLIGA 177 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA+ + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 178 IIAQQGFFHFRKFGADSYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 237 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGLD V +LI PR+ AL+++LP+LT + + +A+ G +V W Y + ++F +R Sbjct: 238 IDALSTMGLDPVVVLILPRVLALVLALPILTFIGSMAALYGGGLVAWFYGGMGPSIFIAR 297 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H ++ + G+IKAPFMA IGIVA EG V + SLGK+ TT VV+SI +VI++ Sbjct: 298 LHDAVSVTHFQVGMIKAPFMALVIGIVACSEGLRVKGSAESLGKQTTTSVVKSIFLVIVL 357 Query: 361 DSLFAIFYFAIGI 373 D LFA+F+ +IG+ Sbjct: 358 DGLFAVFFASIGM 370 >gi|316935525|ref|YP_004110507.1| hypothetical protein Rpdx1_4222 [Rhodopseudomonas palustris DX-1] gi|315603239|gb|ADU45774.1| protein of unknown function DUF140 [Rhodopseudomonas palustris DX-1] Length = 383 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 126/373 (33%), Positives = 198/373 (53%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ +G+W + + V A +D+S I +DT GA LI Sbjct: 16 IARAEGLALCASGSWTARFAPVLERLVTEAEQLGGSKPDVFIDVSGIARLDTFGAWLIER 75 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ + P+ + + +G+ + Sbjct: 76 LRRNLGQAGAEARIAGLSANYASLVDEVRQVSETGPAPK---RGGALRAPIERLGRTMYA 132 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F +D + ++G V++ G F+ L S + + V + VP+++LI+F+ G Sbjct: 133 FFDDIVALISMMGAVLAGLGRIVIRPTSFR--LTSTVHHLEQVCWNAVPIILLITFLIGC 190 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++AQQG F +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ EE Sbjct: 191 IVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREE 250 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F R Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALVLAVPILTFLGAMAALYGGGLVAWLYGGVDPEAFLLR 310 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IGIVA EG AV + SLG+ T VV+SI VI++ Sbjct: 311 LRDAISIDHFTVGMIKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTASVVKSIFFVIVM 370 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ IGI Sbjct: 371 DGVFAIFFAGIGI 383 >gi|299131823|ref|ZP_07025018.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] gi|298591960|gb|EFI52160.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] Length = 383 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 195/371 (52%), Gaps = 6/371 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM 62 R G W + V S + ++D+S I+ +DT GA LI Sbjct: 18 GAGVALRAGGEWTVHHAPALEKLVERTERSRDGSRASLVIDVSQISRLDTFGAWLIERLR 77 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ SL+ R K + + F +G+ +V Sbjct: 78 RALTRGDTAPMIAGLSADYASLVEEVKRVKAVPEPAKVPF---GPVRAVEAVGRTVVGVA 134 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + ++ G ++S F+ L S + Q+ V VP+V+LI+F+ G +I Sbjct: 135 DTLLGLLNMTGSILSAFWRVILHPSHFR--LTSTVHQLEQVCWRAVPIVVLITFLIGCII 192 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG FQ +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSM++ EE+D Sbjct: 193 AQQGIFQFRKFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMRMREEVD 252 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RTMG D +LI PRI AL+I++P+L L +A+ G + W Y + F SR Sbjct: 253 ALRTMGFDPTEVLILPRILALVIAMPILAFLGAMAALYGGGLTAWLYGGVQPDAFLSRLR 312 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + GL+KAPFMA IGI+A EG AV + SLGK T VV+SI VI++D Sbjct: 313 EAISINHFTVGLVKAPFMALIIGIIACVEGAAVQGSAESLGKHTTASVVKSIFFVIVVDG 372 Query: 363 LFAIFYFAIGI 373 LFAIF+ +IG+ Sbjct: 373 LFAIFFASIGV 383 >gi|226942634|ref|YP_002797707.1| ABC transporter protein [Azotobacter vinelandii DJ] gi|226717561|gb|ACO76732.1| ABC transporter protein [Azotobacter vinelandii DJ] Length = 382 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 107/364 (29%), Positives = 184/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + ++ A + + ++D + +DT GA L++ + Sbjct: 22 LNVVGDWTLQHYPRLKREIERARPRLDDACPVVLD--GLGALDTAGAGLLVELLGARRLT 79 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + +L+ + ++ K+ HIG+ + + Sbjct: 80 DIARWAPQLPAERQALLRTVAMAVAGAAGTEEEPERSTLKDELAHIGRVVETLWEQQRTL 139 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL +S +++ L+ + G+ VP+V L++F+ GAV+A GA Sbjct: 140 YGFIGLTLSTLLATLPRPRRWRI--TPLVAHIERTGLDAVPIVALLTFMVGAVVAFLGAT 197 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L QFGA I++++L++ LRE GVLL A+++AGR+ SA A+IG+MK NEEIDAIR +G Sbjct: 198 VLGQFGATIYTVNLVAYSFLREFGVLLCAILMAGRTASAFAAQIGAMKANEEIDAIRALG 257 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ A++++LP+LT +A I+G V DI +F+ + Sbjct: 258 LDPIELLVLPRVLAMLLTLPILTFIAMLCGILGGLAVCVLALDISPVQYFAILEQEIPVN 317 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A I ++ EGF + S+G++ T+ VVQSI +VI+ID+L A+F Sbjct: 318 HYLVGLGKAPLFAFLIAVIGCLEGFKASGSAQSVGERTTSSVVQSIFMVILIDALAALFL 377 Query: 369 FAIG 372 +G Sbjct: 378 MEMG 381 >gi|260430754|ref|ZP_05784726.1| ABC transporter, inner membrane subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260418195|gb|EEX11453.1| ABC transporter, inner membrane subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 374 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 119/370 (32%), Positives = 192/370 (51%), Gaps = 7/370 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 N +G + + + + + DLS + +DT GA LI Sbjct: 12 NDALRIAVSGEMVTQSLESVEKGFRAL---HPDAKRIVFDLSGLGSLDTGGAWLICDLAR 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +L+ + + F +G++ V Sbjct: 69 RASAAGATVTYENVTATQSALLETVAQNIAAEIPAEAPPR--GFVPWLESLGRRTVGAGR 126 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D+ S LGL + ++ + +L+ QM G+ +P+V L+ F+ G V+A Sbjct: 127 DTASMLSFLGLTLHRLARTLVMPWRLRR--AALVSQMEETGLKALPIVALMGFLIGVVLA 184 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QGA QL QFGAEIF ++L+SI LRE+GVLLTA+++AGRSGSA A IGSMK+ EEIDA Sbjct: 185 FQGATQLKQFGAEIFVVELISISVLRELGVLLTAIIVAGRSGSAFTASIGSMKVQEEIDA 244 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++T+GLD + +L+ PR+ AL+I LP+L +A+ + + G +++ W + +F +R Sbjct: 245 MQTLGLDPIEVLVVPRVLALLIMLPILGFVADMAGLFGGALMSWIDLGVSPGMFVTRLKE 304 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ GLIKAPF A I ++A + V S S+G++ T+ VVQ+I +VI ID+L Sbjct: 305 NTDVWHLAVGLIKAPFFAVVIAVIACWQAMQVKGSSQSVGQRTTSSVVQAIFMVIAIDAL 364 Query: 364 FAIFYFAIGI 373 F+IF+ +G+ Sbjct: 365 FSIFFSEVGV 374 >gi|85373087|ref|YP_457149.1| ABC-type transport system permease component [Erythrobacter litoralis HTCC2594] gi|84786170|gb|ABC62352.1| ABC-type transport system permease component [Erythrobacter litoralis HTCC2594] Length = 370 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 121/370 (32%), Positives = 201/370 (54%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G TV R AG + I I D+ + + VDL +++IDT+GA + Sbjct: 13 DDGTTVLRLAGPYLVSTIGPIDQDLRAL-----EGGFSAVDLGDVSQIDTVGAWMACTVA 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + +I+ S +L + + K + F+ + G+++V+F Sbjct: 68 GAHDAEIR--NASDRASRLIDAVQGSINKAETTPE-----RDPLFRRVAMMTGERVVEFG 120 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ G +++ G +F +L RQ+ VG++ +P++ L+SF+ G VI Sbjct: 121 HNLLDLLSFAGAIVAGFGRLLLHPGRFPH--KALFRQLELVGINALPIIGLMSFLIGIVI 178 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGA QL QFGAE +++L+ + +RE+GVL+TA+M+AGRSGSA A+IG+MK+ EE+D Sbjct: 179 AQQGAVQLEQFGAETLTVNLVGRITMRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEVD 238 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ V L+ PRI A ++ +PLL + AI+G ++V IPF F R Sbjct: 239 AMRTIGISPVEALVLPRILAAVLMMPLLGFYSACVAIVGGAVVSEFALGIPFWNFLERIQ 298 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +++ GLIKAP + + +G V +S +G + T VVQ+I +VI++D+ Sbjct: 299 DVVPTYDLWVGLIKAPVFGLIVALAGCYQGMQVRGNSEEVGSRTTKAVVQAIFMVIVLDA 358 Query: 363 LFAIFYFAIG 372 FA+F+ IG Sbjct: 359 FFAVFFTEIG 368 >gi|92116871|ref|YP_576600.1| hypothetical protein Nham_1315 [Nitrobacter hamburgensis X14] gi|91799765|gb|ABE62140.1| protein of unknown function DUF140 [Nitrobacter hamburgensis X14] Length = 377 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 131/373 (35%), Positives = 200/373 (53%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ AG W + + V A + + +D+S I+ +DT GA LI Sbjct: 10 IAQGDGLALCAAGPWTARFAPALERIVADAEKLAGSRPNIFIDVSQISRLDTFGAWLIER 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ R + P + L +G+ +V Sbjct: 70 LRRSLTQGGVEAKIAGLSLNYSSLVDEVRRVPAADPAPA---RQRALTGLIEDVGRNVVG 126 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F +LG V++ +G F+ L S + + V VP+V+LI+F+ G Sbjct: 127 FGTTLTGLIGMLGAVLAASGRVMRHPRSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGC 184 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +I+QQG F +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EE Sbjct: 185 IISQQGIFHFRKFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREE 244 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +L+ PR+ AL+I+LP+L L +A+ G +V W Y + F R Sbjct: 245 IDALRTMGFDPIEVLVLPRMLALVIALPILAFLGAIAALYGGGLVAWLYGGVQPEAFLIR 304 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IGIVA EG AV + SLG++ T+ VV+ I VI++ Sbjct: 305 LRDAISIDHFVVGMIKAPVMAAVIGIVACVEGLAVEGSAESLGQRTTSSVVKGIFFVIVM 364 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ +IG+ Sbjct: 365 DGVFAIFFASIGM 377 >gi|182680563|ref|YP_001834709.1| hypothetical protein Bind_3668 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636446|gb|ACB97220.1| protein of unknown function DUF140 [Beijerinckia indica subsp. indica ATCC 9039] Length = 377 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 143/368 (38%), Positives = 209/368 (56%), Gaps = 5/368 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 F AG+W + + ++ A+ +L+ + +DT GA LI Sbjct: 13 GDAMHFSLAGHWTLEWSKGLESAAADLLKALGKARKAVFNLAGVERLDTAGAWLIDRTRR 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + + L H + K Q + F F GK +V+ Sbjct: 73 NLSERGVSTELDHVRPEYGILFQEAHFRTFPEPKRQNASF---FVAPLVETGKTVVEAGR 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++ LG I++ + F+G SL+ Q+ +G+ VP++ LI+F+ G ++A Sbjct: 130 ETLRGMSFLGEAIASLAQSFVQRQHFRGI--SLVYQIETIGLRSVPIITLINFLVGCIVA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG FQL +FGA F++DL+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA Sbjct: 188 QQGLFQLRRFGASTFAVDLLGILTLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MGL + +LI PR+ AL+ISLPLLT +A+ +A+ G +V + Y I F +R H Sbjct: 248 LTVMGLRPIEVLIVPRLLALVISLPLLTFIADMAALAGGLLVSYSYGGIQPVAFLNRLHD 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +L +TGLIKAPFMA IG++A EGFAV + SLG++VTT VV+SI +VI++D L Sbjct: 308 AISLHTFYTGLIKAPFMALVIGLIAAVEGFAVEGSAESLGRQVTTSVVKSIFMVIVLDGL 367 Query: 364 FAIFYFAI 371 FA+F+ I Sbjct: 368 FAMFFAGI 375 >gi|238784662|ref|ZP_04628667.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] gi|238714434|gb|EEQ06441.1| ABC transporter, permease protein [Yersinia bercovieri ATCC 43970] Length = 381 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + +V + + DLS + +DT GA L++ + + K Sbjct: 21 VAAKGDWVLAHYRALEPEVTQLRANLPAA--VVFDLSQLGALDTAGATLLVLLLGEERVK 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + T ++ L+ + + L +IG+ + D S Sbjct: 79 QLRKLAPTLPDERRVLLETVSHVLPDLTPEPATKAPPFWLELLSNIGRSMDNLWQDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFVGLTLEALLSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPVFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|58580429|ref|YP_199445.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425023|gb|AAW74060.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] Length = 398 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 43 DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 97 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 98 IGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRIGQD 151 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 152 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 209 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 210 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 269 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 270 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 329 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 330 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 389 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 390 ALWFMKMG 397 >gi|78049251|ref|YP_365426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037681|emb|CAJ25426.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 409 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 118/368 (32%), Positives = 190/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R G+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 54 DQAQVRLVGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGR 108 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 109 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 162 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 163 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 220 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 221 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 280 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 281 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 340 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 341 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 400 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 401 ALWFMKMG 408 >gi|114798707|ref|YP_761599.1| hypothetical protein HNE_2921 [Hyphomonas neptunium ATCC 15444] gi|114738881|gb|ABI77006.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 375 Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats. Identities = 108/371 (29%), Positives = 187/371 (50%), Gaps = 9/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + V R G+W I + + + QS +D+S + +DT GA LI Sbjct: 14 SDEGNVLRLGGDWTVATI----NQLDAQLRAVSQSVPICLDVSGLGRLDTSGAYLIDRTW 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + SL+ H P ++ + GK V F Sbjct: 70 RENGAAW-PPRIVGDHASAASLLEQVHAHAEPVPPPAKAD--AGLLAMLERTGKGSVDFY 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ + LG + +K + S++ M G++ +P++ +SF G V+ Sbjct: 127 KETTASLAFLGETLVTIVRLLVQPWKLR--WTSIVAVMEEAGLNAMPIIAFLSFFVGMVV 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L F EI++I+L+ LRE GV+LT +++AGR+ S+ A+IG+MK+ +E+D Sbjct: 185 AFIGATTLKDFDLEIYTIELIGFSMLREFGVVLTGIVLAGRTNSSFTAQIGTMKMRQEVD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++T+GL + +L++PR+ A+++ P+LT +A + + G + V W DI AVF R Sbjct: 245 AMQTLGLKPMDVLVAPRVLAMLVMTPILTFVATLAGVAGGATVAWAALDINPAVFVERMR 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + + G+ K+P + ++A ++G VG SLGK TT VVQ+I +I+ID+ Sbjct: 305 NSVPIDQFWIGMSKSPVFGLVVALIACRQGLQVGGSVQSLGKATTTSVVQAIFAIIVIDA 364 Query: 363 LFAIFYFAIGI 373 +FAIFY +G+ Sbjct: 365 IFAIFYMELGL 375 >gi|86748751|ref|YP_485247.1| hypothetical protein RPB_1627 [Rhodopseudomonas palustris HaA2] gi|86571779|gb|ABD06336.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris HaA2] Length = 383 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 128/373 (34%), Positives = 198/373 (53%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ AG+W + + V A + + +D+S + +DT GA LI Sbjct: 16 IARGDGLALCAAGSWTAKFAPVLERIVADAEQLTGTRPNIFIDVSEVVRLDTFGAWLIER 75 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ + + P + + +G+ + Sbjct: 76 LRRNLAQDGIEAKIAGLSANYASLVDEVRQVE---PVPADTSRGGGLRAPIEKLGRTMFA 132 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F +D + +LG V++ F+ L S + + V VP+V+LI+F+ G Sbjct: 133 FGDDIVALISMLGAVLAGVLRAILHPSTFR--LASTVHHLEQVCWRAVPIVVLITFLIGC 190 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EE Sbjct: 191 IIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREE 250 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F R Sbjct: 251 IDALRTMGFDPIDVLIVPRLLALLLAMPILTFLGAMAALYGGGLVAWLYGGVDPEAFLLR 310 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IGIVA EG AV + SLG+ T VV+ I VI++ Sbjct: 311 LRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVRGSAESLGQHTTASVVKGIFFVIVM 370 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ +IGI Sbjct: 371 DGVFAIFFASIGI 383 >gi|154252954|ref|YP_001413778.1| hypothetical protein Plav_2512 [Parvibaculum lavamentivorans DS-1] gi|154156904|gb|ABS64121.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans DS-1] Length = 387 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 125/372 (33%), Positives = 199/372 (53%), Gaps = 5/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + AG+W + + + AI + AI+ IT DT A ++ Sbjct: 21 ADGNVLRIEAAGDWSIVHLDPVDRQL-RAIGARPGTGRAIIGFKDITRFDTAAAAILGRT 79 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + L+ +P + + IG + Sbjct: 80 AAHLGEQGIKVDFEDVSDAQRLLLDKID--SCGMPEPAHVPWRPLHIQIIDKIGATMRDI 137 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +G V++ G A + + + M G +P+V L++F+ GAV Sbjct: 138 GAEGLAMLGFVGAVMATAGRTIARPSRLR--WTPFVHHMEKAGFDALPLVCLLTFLIGAV 195 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +AQQGA QL QFGAE+F+++L++I+ LRE+G+LLTA+++AGRSGSA AEIGSMK+ EEI Sbjct: 196 VAQQGAVQLRQFGAEVFTVNLIAIIFLREVGLLLTAIIVAGRSGSAFTAEIGSMKMREEI 255 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+GLD + +L+ PR+ AL+++LPLLT +A+ +IG +V+ D+P V+ SR Sbjct: 256 DAMRTLGLDPMEMLVLPRVLALMVTLPLLTFVADIMGLIGGGLVVQVMLDMPPGVYISRV 315 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GL+KAPFMA I +V + G +V + S+G T VV+SI +VII+D Sbjct: 316 QEAVGFWTFGVGLVKAPFMAVVIALVGCRSGLSVTGSAESVGAMTTRSVVRSIFLVIILD 375 Query: 362 SLFAIFYFAIGI 373 +LFA+F+ A+GI Sbjct: 376 ALFAMFFTAVGI 387 >gi|229587675|ref|YP_002869794.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359541|emb|CAY46382.1| putative ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 382 Score = 271 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 120/365 (32%), Positives = 194/365 (53%), Gaps = 5/365 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + A +DL+ + +DT GA L++ + + Sbjct: 21 LRITGDWTLAHYASLKKLSDKLDGQYDAG--ARIDLNGLGALDTAGASLLVELLGPTRIE 78 Query: 69 IKLQGVS-THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + +L+ +R P+++ + + IG+ + DS Sbjct: 79 QSAEQTDCSLSAADRALLKTVYRSLNDFCVPEKAPEEAAGIQVLARIGRAVDTVWQDSKQ 138 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +GL++ +++ L ++ + VG+ P+V L++F+ GAV+A GA Sbjct: 139 LLGFIGLILETFARGIFRPRRWR--LTPMVAHLEQVGLDAAPIVALLTFLVGAVVAFLGA 196 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGA IF++DL++ LRE GVLLTA++IAGR+ SA A+IGSMK NEEIDAIRT+ Sbjct: 197 TVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIRTL 256 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + +L+ PR+ AL+++LP+LT LA S I+G +V DI A+F S S + Sbjct: 257 GLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDIGV 316 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + GL+KAP A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 317 QHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALF 376 Query: 368 YFAIG 372 + +G Sbjct: 377 FMEMG 381 >gi|86357964|ref|YP_469856.1| ABC transporter permease [Rhizobium etli CFN 42] gi|86282066|gb|ABC91129.1| probable ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 389 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 149/371 (40%), Positives = 225/371 (60%), Gaps = 5/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ R +GNW+S + + + + ++ + +DLS +++IDT G L+ Sbjct: 23 SDGSGQHVRLSGNWRSAYVHLVLHEFEKL--QREKTGNLTLDLSDVSDIDTAGIWLLCRL 80 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + + ++ + K +P++ + + +GK Sbjct: 81 KKQEEAAGRTVRFVGTNPHIDEMLEMFSEEPAK-PEPEQKEKVSLAARILAPLGKMTYDI 139 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 140 WDNLAASMYILGSAVRGAQMKLGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 197 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI Sbjct: 198 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 257 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F +R Sbjct: 258 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARL 317 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 318 HEAITLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMD 377 Query: 362 SLFAIFYFAIG 372 LFA+FY AI Sbjct: 378 GLFAMFYAAID 388 >gi|90425518|ref|YP_533888.1| hypothetical protein RPC_4043 [Rhodopseudomonas palustris BisB18] gi|90107532|gb|ABD89569.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB18] Length = 378 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 133/373 (35%), Positives = 206/373 (55%), Gaps = 4/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S + R G+W + + + + + Q+ + +DL+ + EIDT+GA L+ Sbjct: 10 ISTGDGLLLRPTGSWTAVHAAALEHLFDVVAPQLRQAKALTIDLAELHEIDTLGAWLLEK 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + V E+ LI + + ++P + + IG+ Sbjct: 70 ISRRAAQAGHPASVVGAAERYAGLIDQVRQ--VNRRQPANAVRGSLILTRLEDIGRATWG 127 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D + + G + + + L SL+ Q+Y VG +P++ LI+F+ GA Sbjct: 128 AREDLFAFLQMTGALANALLGVLRRPRSLR--LTSLVYQIYRVGWQAIPIIGLITFLIGA 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 186 IIAQQGIFHFRKFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM LD V +LI PR+ ALII+LP+L L +A+ G +V W Y + +F +R Sbjct: 246 IDALSTMDLDPVEVLILPRVIALIIALPILAFLGAMAALYGGGLVAWFYGGMSPTIFIAR 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H ++ + G+IKAPFMA IGIVA EG V + SLG++ T VV+SI VI++ Sbjct: 306 LHEAVSITHFEVGIIKAPFMALVIGIVACSEGLRVMGSAESLGRQTTASVVKSIFCVIVL 365 Query: 361 DSLFAIFYFAIGI 373 D LFA+F+ +IG+ Sbjct: 366 DGLFAVFFASIGM 378 >gi|254512708|ref|ZP_05124774.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] gi|221532707|gb|EEE35702.1| ABC transporter, inner membrane subunit [Rhodobacteraceae bacterium KLH11] Length = 374 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 126/368 (34%), Positives = 197/368 (53%), Gaps = 7/368 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G+ ++ E+ ++ D + ++D+S + +DT GA LI + + Sbjct: 14 GVHIRITGDLRTQELDDVEADFGKL---RPSGQNVVLDMSQLQSLDTGGAWLIADLVRRL 70 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 SLI + Q IG++ D+ Sbjct: 71 GSDSSQVQFEGAKPAHASLIETVSKNIP--QAVGDQAPARGVVVWVSRIGERTFGAWEDT 128 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S LGL + ++ + +L+ QM VG +P+V L+ F+ G V+A Q Sbjct: 129 LSIMGFLGLTLHRLVRTLIMPWRLRR--AALVSQMEQVGFKALPIVALMGFLIGVVLAFQ 186 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA QL QFGAEIF ++L+SI LRE+G+LLTA+++AGRSGSA A IGSMK+ EEIDA+R Sbjct: 187 GATQLKQFGAEIFVVELISISILRELGILLTAIIVAGRSGSAFTASIGSMKVQEEIDAMR 246 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD + +L+ PR+ AL+I LP+L +A+ + +IG +++ W + +F +R Sbjct: 247 TLGLDPIEVLVIPRVLALLIMLPILGFIADMAGLIGGALMSWIDLGVSPGMFLTRLKENT 306 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +A + G+IKAPF A IG++A + V S S+G++ T VVQSI +VI ID+LF+ Sbjct: 307 GVAQLAVGMIKAPFFALVIGVIACWQAMQVKGSSESVGQRTTASVVQSIFMVIAIDALFS 366 Query: 366 IFYFAIGI 373 IF+ +G+ Sbjct: 367 IFFSELGV 374 >gi|115523490|ref|YP_780401.1| hypothetical protein RPE_1471 [Rhodopseudomonas palustris BisA53] gi|115517437|gb|ABJ05421.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisA53] Length = 377 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 126/373 (33%), Positives = 197/373 (52%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ AG W +P + VV A S ++D+S ++ +DT GA LI Sbjct: 10 IAKGNALALCAAGPWTAPYAPALERIVVEAEALSSDGAKVLIDVSDVSRLDTFGAWLIER 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ R + + + IG+ +V Sbjct: 70 LRRSLAQGGIEAQIAGLSANYSSLVDEVRRVEADDAPRSTKMR---LRAPLEEIGRNVVG 126 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + S + G V ++ F+ L S + + V VP+V+LI+F+ G Sbjct: 127 FGDTMVSLVAMSGAVTASVFRLIRHPLSFR--LTSTVHHLEQVCWRAVPIVVLITFLIGC 184 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++AQQG F +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ EE Sbjct: 185 IVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREE 244 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +L+ PR+ AL++++P+LT L +A+ G +V W Y + F R Sbjct: 245 IDALRTMGFDPIDVLVMPRLIALVLAVPILTFLGVVAALYGGGLVAWVYGGVEPDAFLLR 304 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IG+VA EG AV + SLG+ T VV+ I VI++ Sbjct: 305 LREAISIDHFTVGMIKAPVMALVIGVVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVM 364 Query: 361 DSLFAIFYFAIGI 373 D +FAI + IG+ Sbjct: 365 DGVFAIMFATIGM 377 >gi|299132338|ref|ZP_07025533.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] gi|298592475|gb|EFI52675.1| protein of unknown function DUF140 [Afipia sp. 1NLS2] Length = 377 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 215/370 (58%), Gaps = 5/370 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G AG+W + ++S + V AI+ + +D+SA+ +IDTIGA L+ + Sbjct: 13 DGSAQLYAAGSWTASQVSSLEPVVNAAIHNVSGARVLQLDMSAVDQIDTIGAWLLERMIR 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + H E+ LI + P N+ Y IG+ V + Sbjct: 73 RVHQAGSEIRTVGIHERFAGLIDELRSVNLH---PPVHERQNAVLLKLYQIGQSTVASLQ 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +LG + S + + L S I Q++ VG VP++++I+F+ GA+IA Sbjct: 130 ELLVFLEMLGRLGSVLARLAFKPSRLR--LTSTIYQLHKVGWQAVPIMVMITFLIGAIIA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG F +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEIDA Sbjct: 188 QQGIFHFRKFGADAYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEIDA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + TMGLD + +L+ PR+ AL+I+LP+L + + +A+ G ++ W Y + A+F +R H Sbjct: 248 LTTMGLDPLEVLVLPRVLALVIALPILAFIGSIAALYGGGLISWLYGGMSPAIFIARLHE 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ + GLIKAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D L Sbjct: 308 AVSVTHFEVGLIKAPFMALVIGIVASSEGLRVKGSAESLGRQTTTSVVKSIFLVIVLDGL 367 Query: 364 FAIFYFAIGI 373 FA+F+ +IG+ Sbjct: 368 FAVFFASIGM 377 >gi|149374946|ref|ZP_01892719.1| putative permease of ABC transporter [Marinobacter algicola DG893] gi|149360835|gb|EDM49286.1| putative permease of ABC transporter [Marinobacter algicola DG893] Length = 374 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 116/364 (31%), Positives = 195/364 (53%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W P + DV A+ K + V+L+ I +DT GA L++ + + Sbjct: 14 LTVSGDWTLPNYGSLKRDVQNAVLKEVPDGH-SVNLATINALDTAGASLLVDLLGAHELH 72 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + L+ + + +++F N IG+ I F + Sbjct: 73 ELTEQTPELSSERQELLRLVANAMA-SPEGEKAFCSNPITEFLAGIGENIEDFWHQQRLL 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G +++ A+ ++++ SL+ ++ G++ +P+V L++F+ GAV+A GA Sbjct: 132 IGFTGQILATLASILATPWRWRI--TSLVAHVHQTGLNALPIVALLTFLVGAVVAFLGAT 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGA I++++L++ LRE GVLL A+++AGR+ SA A++GSMK NEEIDA+RT G Sbjct: 190 ILDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAQLGSMKANEEIDALRTFG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L V +L+ PR+ A++ISLP+LT + S IIG S+V DI + + + Sbjct: 250 LSPVELLVIPRVLAMVISLPILTFVGMISGIIGGSVVCVLALDISVPQILNILETKVKVV 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL KAP A I ++ EGF + S+G+ T+ VVQSI +VI++DS+ AIF+ Sbjct: 310 HLLVGLGKAPVFAFVIAVIGCLEGFKASGSAQSVGEHTTSAVVQSIFMVILLDSIAAIFF 369 Query: 369 FAIG 372 +G Sbjct: 370 MEMG 373 >gi|114320361|ref|YP_742044.1| hypothetical protein Mlg_1205 [Alkalilimnicola ehrlichii MLHE-1] gi|114226755|gb|ABI56554.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii MLHE-1] Length = 377 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 187/366 (51%), Gaps = 8/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + +G+W ++ +A + + ++ +D SA+ +D GA + E+ Sbjct: 20 LIQCSGDWTRTGLTRLAGQDLRTL-PPPRTGGWTLDASAMGRLDLTGARQLHRLQERLRE 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + + + + + ++ +G++ V + + Sbjct: 79 RGDSVRLGEERPEHMDGLLAFTERAVSERR-----PPPPPPGPLERLGRQTVIRLGHFWA 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + + + L ++ GV +P++ L++F+TG VIA QG Sbjct: 134 FLAFIGEIALEALPRLLRPWTIR--WKQLSAEIQKAGVQALPIIGLLAFLTGLVIAYQGG 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L ++GA IF ++L+S+ LRE+ +LTA+++AGR+GS+ A++G+MKI EEIDA+RT+ Sbjct: 192 DTLERYGANIFLVELVSVTMLREMAPMLTAIVVAGRTGSSWAAQLGTMKITEEIDALRTL 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ +LI PR+ AL++ LPLLTI A+ I+G +V + + F +R Sbjct: 252 GISPFDMLILPRLMALMVVLPLLTIYADVLGILGGMLVADLMFGVAMHDFINRLPEAIAT 311 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++++ GL+KAP A I +A +G V + S+G+ T VVQ+I +VI+ D++F+I Sbjct: 312 SHLWVGLVKAPVFALIIVGIACFQGMRVKGSAESVGRATTITVVQAIFLVIVTDAVFSIL 371 Query: 368 YFAIGI 373 + +G+ Sbjct: 372 FNLVGL 377 >gi|146342154|ref|YP_001207202.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194960|emb|CAL78985.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 378 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 4/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + R +G+W S ++++ A K + +DL +++EIDT+GA LI Sbjct: 11 ATEEVLELRASGSWVSRNVTQLESLTGSACAKLGHAGIVRLDLGSVSEIDTVGAWLIEKL 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + ++ L+ + + P + N +G+ + Sbjct: 71 SRRAGVGGRRVEMTGVAASYSGLVDEVRQVNRREIAP--APRPNPIVARLTDLGRSTMGA 128 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +L + + SL+ QMY +G +P+V+LI+F+ GA+ Sbjct: 129 AKDVTIFLDMLAALSFALVRTLRRPRSLRV--TSLVYQMYRIGWQAIPIVVLITFLIGAI 186 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AEIGSMK+ EEI Sbjct: 187 IAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAEIGSMKMREEI 246 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD V +LI PRI ALI++LP+L + + +A+ G +V Y + +F +R Sbjct: 247 DALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPPIFIARL 306 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H ++ + G++KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D Sbjct: 307 HEAISVTHFEVGMLKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLD 366 Query: 362 SLFAIFYFAIGI 373 LFAIF+ +IG+ Sbjct: 367 GLFAIFFASIGM 378 >gi|91975833|ref|YP_568492.1| hypothetical protein RPD_1353 [Rhodopseudomonas palustris BisB5] gi|91682289|gb|ABE38591.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB5] Length = 378 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 202/373 (54%), Gaps = 4/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ + G W + + + + + + S +D++ + EIDTIGA L+ Sbjct: 10 VTDGDVLELHPGGAWIASQSAALERLFEGVAPQVAAAKSLKIDMTEVIEIDTIGAWLLEK 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + + E+ LI + P+ N +G+ Sbjct: 70 ASREAAQAGRTAHFVGVGERYAGLIEEVRQVNRHRPTPK--PKVNPIIARLDQVGRSAWS 127 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D + G + + L SL Q+Y VG +P+V+LI+F+ GA Sbjct: 128 ATQDIAVFLDMFGALGVALLGVLRRPRSLR--LTSLTYQIYRVGWRAIPIVVLITFLIGA 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 186 IIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGLD V +LI PRI AL+I+LP+LT + + SA+ G + W Y + AV+ +R Sbjct: 246 IDALSTMGLDPVEVLILPRIIALVIALPILTFIGSMSALYGGLLTAWFYGGMQPAVYIAR 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI++ Sbjct: 306 LHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVL 365 Query: 361 DSLFAIFYFAIGI 373 D LFA+F+ +IG+ Sbjct: 366 DGLFAVFFASIGL 378 >gi|110633893|ref|YP_674101.1| hypothetical protein Meso_1540 [Mesorhizobium sp. BNC1] gi|110284877|gb|ABG62936.1| protein of unknown function DUF140 [Chelativorans sp. BNC1] Length = 395 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 159/370 (42%), Positives = 217/370 (58%), Gaps = 3/370 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ENG V R +GNW + +S + DD + + I+DL + +DT GA L+ Sbjct: 28 ENGALVCRLSGNWTTRTVS-LVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAWLVSRLA 86 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +S E L++ + P+ N N+ +G+ I Sbjct: 87 AAQKENGAQVEISGQSEAASILLAAIEPTAQEPDVPKDGRRGNLIVNILAAMGRTIYDIK 146 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +D HILG IS + ++ Q+ +GV +P+++L+S V GA+I Sbjct: 147 DDVLYGMHILGATISGAQMKLGRGHAVNP--AAIANQIDRMGVGSIPIIVLMSAVVGAII 204 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEI+ +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE+D Sbjct: 205 AQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAIMIAGRSGSAITAEIGSMKMREEVD 264 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++++P LTI+ANFSA+ GA +V W Y DI A F R H Sbjct: 265 ALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFIQRLH 324 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L +IF GLIKAPFMA IGI+A EG VG + SLGK VT VV++I +VI+ID Sbjct: 325 DAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVIVIDG 384 Query: 363 LFAIFYFAIG 372 LFA+FY AI Sbjct: 385 LFAMFYAAID 394 >gi|294624127|ref|ZP_06702865.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663966|ref|ZP_06729386.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601572|gb|EFF45571.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606261|gb|EFF49492.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 370 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 118/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DQAQVRLAGSWVLATALPQAE-----LLQAVPEGVRRIDARGIQQLDSAGVLQLLRFAGR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 70 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ AL+ +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALVFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|21244295|ref|NP_643877.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] gi|21109945|gb|AAM38413.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str. 306] Length = 370 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DQAQVRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 70 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|148257023|ref|YP_001241608.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409196|gb|ABQ37702.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 378 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 135/372 (36%), Positives = 210/372 (56%), Gaps = 4/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + R +G+W S ++E+ + A K + + +DL A++EIDT+G L+ Sbjct: 11 ATGELLELRPSGSWVSLNVTELENLTRSASGKVGNAKAVKLDLGAVSEIDTVGVWLLEKL 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +L ++ E L+ + ++ P N +G+ + Sbjct: 71 SRSAAAGGRLVEMTGVAENYVGLVEEVRQVNRRDIAP--PPRQNPIVAKLTDLGRSTLGA 128 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +L + A + SL+ QMY +G +P+V+LI+F+ GA+ Sbjct: 129 ARDVTVFLDMLAALSLALVRTLARPRSLRV--TSLVYQMYRIGWQAIPIVVLITFLIGAI 186 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGAE + +D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ EEI Sbjct: 187 IAQQGIFHFRRFGAESYVVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMREEI 246 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD V +LI PRI ALI++LP+L + + +A+ G +V Y + A+F +R Sbjct: 247 DALVTMGLDPVEVLILPRIVALILTLPILAFIGSMAALYGGGLVAQLYGGMGPAIFIARL 306 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H ++ + G+ KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI++D Sbjct: 307 HDAVSVTHFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGQQTTTSVVKSIFLVIVLD 366 Query: 362 SLFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 367 GLFAVFFASIGL 378 >gi|325928564|ref|ZP_08189752.1| putative integral membrane protein [Xanthomonas perforans 91-118] gi|325541103|gb|EGD12657.1| putative integral membrane protein [Xanthomonas perforans 91-118] Length = 370 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DQAQVRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 70 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|312958198|ref|ZP_07772721.1| ABC transport system permease protein [Pseudomonas fluorescens WH6] gi|311287629|gb|EFQ66187.1| ABC transport system permease protein [Pseudomonas fluorescens WH6] Length = 382 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 119/366 (32%), Positives = 193/366 (52%), Gaps = 5/366 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + R G+W + + + A +DL+ + +DT GA L++ + Sbjct: 19 ALLRITGDWTLAHYANLKKLADKLDGQYDAG--ARIDLNGLGALDTAGASLLVELLGPTR 76 Query: 67 GKIKLQGVS-THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + + T +L+ +R P+++ + L IG+ + DS Sbjct: 77 IEQSAEQTDCTLSAADRALLKTVYRSLNDFCVPEKAPEETAGMQLLARIGRAVDTVWQDS 136 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +GL++ +++ ++ + VG+ P+V L++F+ GAV+A Sbjct: 137 KQLLGFIGLILETFARGIFRPKRWRI--TPMVAHLEQVGLDAAPIVALLTFLVGAVVAFL 194 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA L FGA IF++DL++ LRE GVLLTA++IAGR+ SA A+IGSMK NEEIDAIR Sbjct: 195 GATVLKSFGATIFTVDLVAFSFLREFGVLLTAILIAGRTASAFTAQIGSMKANEEIDAIR 254 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD + +L+ PR+ AL+++LP+LT LA S I+G +V DI A+F S S Sbjct: 255 TLGLDPMELLVLPRVLALLVALPMLTFLAMLSGIVGGGVVCAVALDISPAMFLSLLQSDI 314 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + G++KAP A I + EGF V + S+G T+ VVQSI +VI++D++ A Sbjct: 315 GVQHFLVGMVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAA 374 Query: 366 IFYFAI 371 +F+ + Sbjct: 375 LFFMEM 380 >gi|166713439|ref|ZP_02244646.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 370 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 70 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRIGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|289662615|ref|ZP_06484196.1| ABC transporter permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668440|ref|ZP_06489515.1| ABC transporter permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 370 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 70 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRVGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVTGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|91976115|ref|YP_568774.1| hypothetical protein RPD_1636 [Rhodopseudomonas palustris BisB5] gi|91682571|gb|ABE38873.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB5] Length = 383 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 128/373 (34%), Positives = 196/373 (52%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ AG+W + + V A + + +D+S + +DT GA LI Sbjct: 16 IARGEGLALCAAGSWTARFAPSLERIVADAEKLTGTRPNIFIDVSEVARLDTFGAWLIER 75 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ + + + + +G+ + Sbjct: 76 LRRNLTQDGVEARIAGLSANYASLVDEVRQVQPDVPAVASG---GALRAPIEKLGRTMYV 132 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F +D + +LG V++ F+ L S + + V VP+V+LI+F+ G Sbjct: 133 FADDIVALISMLGAVLAGVMRAILHPTTFR--LTSTVHHLEQVCWRAVPIVVLITFLIGC 190 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGA++F +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EE Sbjct: 191 IIAQQGIFHFRRFGADVFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREE 250 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +LI PR+ AL++++P+LT L SA+ G +V W Y + F R Sbjct: 251 IDALRTMGFDPIDVLIVPRLIALLLAMPILTFLGAMSALYGGGLVAWLYGGVDPEAFLLR 310 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IGIVA EG AV + SLG T VV+ I VI++ Sbjct: 311 LRDAISINHFTVGMIKAPVMALVIGIVACVEGLAVKGSAESLGSHTTASVVKGIFFVIVM 370 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ +IGI Sbjct: 371 DGVFAIFFASIGI 383 >gi|158423837|ref|YP_001525129.1| hypothetical protein AZC_2213 [Azorhizobium caulinodans ORS 571] gi|158330726|dbj|BAF88211.1| protein of unknown function [Azorhizobium caulinodans ORS 571] Length = 408 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 203/372 (54%), Gaps = 7/372 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G W S + V+ + ++ + +DLS + +DT GA L+ Sbjct: 44 AEGDHIKVEGQGAWTSEYADSLEQAVMQVASHYGEAKAVEIDLSRLDRMDTFGALLLERL 103 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + K + LI R + + IG+++V Sbjct: 104 RRVWQEKGVEPQIVGLNPAYSVLIEEMTRTGREP-----PPPERKPPGVFERIGREMVVI 158 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ S + +G V++ G F+ S++ QM VG +P++ILI+F+ G + Sbjct: 159 TEDAVSLLNFVGAVVAAFGRVLTRPRSFR--FTSMVNQMDRVGFRAMPIIILITFLIGCI 216 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQG F +FGA+I+ +D++ +L LRE+GVL+ ++MIAGRSGSA AE+GSM++ EE+ Sbjct: 217 IAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEV 276 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG D V +L+ PR+ ALII LPLLT + + +A+IG +V W Y I VF +R Sbjct: 277 DALRVMGFDPVEVLVVPRLLALIICLPLLTFVGSMAAMIGGGLVAWFYGGIAPDVFINRL 336 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 TLA G+IKAPFMA IG+V EG VG + SLG+ T VV++I +VI++D Sbjct: 337 KDAITLAQFEVGMIKAPFMAAIIGVVGCMEGLRVGGSAESLGQHTTASVVKAIFLVIVVD 396 Query: 362 SLFAIFYFAIGI 373 LFAIF+ +I + Sbjct: 397 GLFAIFFASIDM 408 >gi|84622391|ref|YP_449763.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578633|ref|YP_001915562.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366331|dbj|BAE67489.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523085|gb|ACD61030.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 370 Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 119/368 (32%), Positives = 191/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DQAQLRLAGSWVLATALPQAE-----LLQTVPDGVRRIDARGIQQLDSAGVLQLLRFASR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ + D Sbjct: 70 IGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRATHRIGQD 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHET 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|170724242|ref|YP_001751930.1| hypothetical protein PputW619_5085 [Pseudomonas putida W619] gi|169762245|gb|ACA75561.1| protein of unknown function DUF140 [Pseudomonas putida W619] Length = 377 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 190/364 (52%), Gaps = 7/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W + + D ++ A+ DLS + ++DT GA L+ + Sbjct: 20 LRIAGDWTLAHYASLKRDSERL--RTQYDADAVADLSQLGQLDTAGASLLAELLGSERLS 77 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 Q + L + P + + L IG+ + D+ Sbjct: 78 HCTQELPDASRALL---KNVYCSVQDYCIPVKEPERHVLILLLERIGRAVNTLWQDTLQL 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL++ ++++ L ++ + G+ P+V L++F+ GAV+A GA Sbjct: 135 LGFIGLILETLLRRALQPHRWR--LTPVVSHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA +F++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 193 VLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 253 LNPIELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALSLDISPAMFLSLLQSDIGVQ 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFC 372 Query: 369 FAIG 372 +G Sbjct: 373 MEMG 376 >gi|237808113|ref|YP_002892553.1| hypothetical protein Tola_1352 [Tolumonas auensis DSM 9187] gi|237500374|gb|ACQ92967.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187] Length = 381 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 110/369 (29%), Positives = 197/369 (53%), Gaps = 4/369 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G + R +G+W + + + I + D + +DT GA L++ + Sbjct: 15 ESGHVLLRISGDWTLTHYVMLKRQITSVQEQMIADTPILWD--DLGSLDTAGAALLVELL 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + S + +L+ ++ ++ ++ + HIG+ ++ Sbjct: 73 GQVRLSLLTTQDSGLSAERLALLHSVAAALKESTNIEKQPKESAISEMLAHIGQVVIHLG 132 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +GL I +++ SL + G++ +P++ L++F+ GAV+ Sbjct: 133 QQQIALLGFIGLTIETLVRSLIHPRRWRI--TSLAAHIEQTGLNAIPIIALLTFLVGAVV 190 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A G LS FGA I+++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEID Sbjct: 191 AFLGTTVLSDFGASIYTVDLVAFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEID 250 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 AIR +GL+ + +L+ PR+ A++ISLP+LT +A +IG ++V + DI +F + Sbjct: 251 AIRALGLNPIELLVLPRVLAMLISLPILTFIAMACGMIGGAVVCFLELDITPRLFLTILQ 310 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +++ F G+ KAP A + ++ EGF VG + S+G+ + VVQSI +VI++D+ Sbjct: 311 RDIDISHFFVGIGKAPLFAFIVAVIGCLEGFKVGGSAQSVGEHTISSVVQSIFMVILLDA 370 Query: 363 LFAIFYFAI 371 L A+F+ + Sbjct: 371 LAALFFMEM 379 >gi|148555653|ref|YP_001263235.1| hypothetical protein Swit_2742 [Sphingomonas wittichii RW1] gi|148500843|gb|ABQ69097.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1] Length = 365 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 14/365 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V F G I +++ + +DL + IDT+GA L+ ++ Sbjct: 13 VLHFTGALTLARIGDLSRRLEALDEVPR-----TIDLGEVDRIDTVGAWLVHRIAREH-- 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +++ G + QL I+ + R F + IG + Sbjct: 66 DVEIVGADADVCQLIEQIAEADK-----PLKIRPDSSPPFFRVLREIGDATSAAAHSLAG 120 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + +F+ ++ RQ VGV + ++ L+SF+ G VIAQQGA Sbjct: 121 LIGFFGATLIGLWGLVTHPRRFRYN--AMARQFEVVGVKALAIIGLMSFLIGIVIAQQGA 178 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGAE+F+++L+ + LRE+GVL+TA+M+AGRSGSA A++GSMK+ EE+DA+RT+ Sbjct: 179 VQLRQFGAEVFAVNLIGRITLRELGVLMTAIMVAGRSGSAFAAQLGSMKLAEEVDAMRTI 238 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + LI PR+ + ++ +PLL A AIIG I W DIP + R + Sbjct: 239 GVSPMEALILPRVLSTVVLMPLLGFYAAVIAIIGGGIFCWIDLDIPPITYVQRIREVVPM 298 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI++D++FA+F Sbjct: 299 TDLWVGLIKAPVFGMLIALCGCYQGMQVEGNAEEVGLRTTASVVQAIFLVIVLDAVFAVF 358 Query: 368 YFAIG 372 + +IG Sbjct: 359 FSSIG 363 >gi|325915744|ref|ZP_08178046.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325538008|gb|EGD09702.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 370 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R +G+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DQAQVRLSGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFAGR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ Sbjct: 70 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQG 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIMRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|323136828|ref|ZP_08071909.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242] gi|322398145|gb|EFY00666.1| protein of unknown function DUF140 [Methylocystis sp. ATCC 49242] Length = 380 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 130/369 (35%), Positives = 205/369 (55%), Gaps = 5/369 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NG +G+W + +++ + +DLS + ++DT GA LI Sbjct: 16 NGGERLALSGDWILIASRRLEQKAQQLVDEGGRVKFVTIDLSGVEKLDTAGAWLINRARH 75 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + ++ + +++ ++ + + +N+ +L +G +V + Sbjct: 76 ELAHADVGVALAHARPEHHTMLEEAAFREFEKPPRR---RFNAIVDLLADLGASVVDALR 132 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + LG I+ F+ SL+ M +G P+++LI+ + GA++A Sbjct: 133 EFYRGVAFLGEFIAAMAYVATHPGHFR--FTSLVFHMETIGFRSAPIIVLINLLVGAIVA 190 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG FQL +FGA +++ L+ IL LRE+GVLLT++MIAGRSGSAI AEIGSMK+ EEIDA Sbjct: 191 QQGIFQLLKFGASSYTVSLIGILVLRELGVLLTSIMIAGRSGSAITAEIGSMKMREEIDA 250 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MGL + +LI+PR+ ALI+SLP+LT +A+ +A+ G +V W Y I A F S Sbjct: 251 LRVMGLSPIEVLIAPRVLALIVSLPILTFIADMAALFGGLLVSWSYGGISPAAFLSLLKE 310 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L G+IKAPFMA IG++A +G + SLG++VT+ VV+SI +VI++D L Sbjct: 311 AIALHTFLVGMIKAPFMALVIGLIAAMDGLETKGSAESLGRQVTSSVVKSIFMVIVLDGL 370 Query: 364 FAIFYFAIG 372 FAIF+ +I Sbjct: 371 FAIFFASID 379 >gi|209549578|ref|YP_002281495.1| hypothetical protein Rleg2_1984 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535334|gb|ACI55269.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 383 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 154/371 (41%), Positives = 222/371 (59%), Gaps = 5/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S R GNW+S + + D +++ ++ VDLS IT+IDT G L+ Sbjct: 17 SGGSGQHVRLKGNWRSAYVHFVLRDFEKLLHQ--KAGDLTVDLSDITDIDTAGIWLLCRL 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + + ++ + K +P+ + + IG+ Sbjct: 75 KKEEEAAGRTVRFEGTNPHIDEMLEMFSEEPAK-PEPELKEKVSLAARILAPIGRMTYDI 133 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 134 WDNFAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 191 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI Sbjct: 192 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 251 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F SR Sbjct: 252 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAAVAWGYSGITFANFLSRL 311 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 312 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMD 371 Query: 362 SLFAIFYFAIG 372 LFA+FY AI Sbjct: 372 GLFAMFYAAID 382 >gi|241204915|ref|YP_002976011.1| hypothetical protein Rleg_2195 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858805|gb|ACS56472.1| protein of unknown function DUF140 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 394 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 156/371 (42%), Positives = 225/371 (60%), Gaps = 5/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ R GNW+S I + D + K ++ VDLS I+EIDT G L+ Sbjct: 28 ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLTVDLSDISEIDTAGIWLLCRL 85 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + + ++ + K + P+++ + + IGK + Sbjct: 86 KKQEEAGGRTVRFEGTNSHIDEMLEMVSEEPAKVE-PEQTEKVSLAARIFAPIGKMTYEV 144 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 145 WDNFAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 202 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI Sbjct: 203 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 262 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F SR Sbjct: 263 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRL 322 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 323 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMD 382 Query: 362 SLFAIFYFAIG 372 LFA+FY AI Sbjct: 383 GLFAMFYAAID 393 >gi|167031179|ref|YP_001666410.1| hypothetical protein PputGB1_0158 [Pseudomonas putida GB-1] gi|166857667|gb|ABY96074.1| protein of unknown function DUF140 [Pseudomonas putida GB-1] Length = 377 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 188/364 (51%), Gaps = 7/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + ++ + + DLS + +DT GA L+ + Sbjct: 20 LRITGDWTLAHYANLKRESEQL--RTQYAADTVADLSQLGRLDTAGASLLAELLGSERLS 77 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 Q + L + P + N L IG+ + DS Sbjct: 78 RCTQDLPEASRALL---KNVYCSVQDYCIPVKEPERNVLLMLLERIGRAVGTLWQDSMQL 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 135 LGFVGVILETLLRRALQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 193 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL+ISLPLLT +A +IG ++V DI A+F S S + Sbjct: 253 LNPMELLVVPRVLALLISLPLLTFVAMICGMIGGAVVCALTLDISPAMFLSLLQSDIGVQ 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 372 Query: 369 FAIG 372 +G Sbjct: 373 MEMG 376 >gi|206575650|ref|YP_002235755.1| putative ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206570494|gb|ACI12140.1| putative ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 382 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 187/364 (51%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W + + V + + +AI DLS + +DT GA L++ M + Sbjct: 22 ISASGDWVLAHYAYLEPAVSALQPQLLS--NAIFDLSQLGTLDTAGATLLVKLMGEKKVL 79 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + T + L+ P L +IGK + F + + Sbjct: 80 ELERIAPTLPIERRVLLQTVRSAIQNYVTPPAQHQPGIVTELLANIGKSVESFWQNLVAL 139 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + ++ SL+ + +G++ VP++ L++F+ GAVIA G+ Sbjct: 140 IGFIGLTMEALFATLLRPAHWRV--TSLVANLQQIGLNAVPIIALLTFMVGAVIAFLGST 197 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 LS FGA IF++ L++ LRE VLL A+++AGR+ SA A+IG MK NEEIDAI+TMG Sbjct: 198 VLSTFGASIFTVQLVAFSFLREFAVLLAAILMAGRTASAFTAQIGLMKANEEIDAIQTMG 257 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+++LP++T + I+G +V DI +F + + Sbjct: 258 LNPVELLVLPRVLALLVALPMMTFIGMICGILGGIVVCALTLDISPTMFLTIMQNNVGFE 317 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + + G+IKAP A I I+ EGF V + S+G+ T VV SI +VI++D++ A+F+ Sbjct: 318 HFWVGMIKAPVFAFLIAIIGCLEGFKVSGSAESVGEHTTASVVHSIFVVILLDAVAALFF 377 Query: 369 FAIG 372 +G Sbjct: 378 MEMG 381 >gi|26986887|ref|NP_742312.1| hypothetical protein PP_0142 [Pseudomonas putida KT2440] gi|24981490|gb|AAN65776.1|AE016203_9 ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 377 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 7/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + +S + DLS + +DT GA L+ + Sbjct: 20 LRITGDWTLAHYANLKRESERL--RSHCPADTVADLSQLGRLDTAGASLLAELLGSERLS 77 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + L + P + N L IG+ + DS Sbjct: 78 HCTHALPEASQALL---KNVYCSVQDYCIPVKEPERNVLLLLLERIGRAVGTLWQDSMQL 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 135 LGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 193 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 253 LNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGVQ 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 372 Query: 369 FAIG 372 +G Sbjct: 373 MEMG 376 >gi|87200858|ref|YP_498115.1| hypothetical protein Saro_2845 [Novosphingobium aromaticivorans DSM 12444] gi|87136539|gb|ABD27281.1| protein of unknown function DUF140 [Novosphingobium aromaticivorans DSM 12444] Length = 372 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 117/370 (31%), Positives = 192/370 (51%), Gaps = 13/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + F+G + + + I A +DLSA+T +DT+GA + Sbjct: 14 QGAGATLAFSGPMTVSSLGLTDQRL-----RHITDPVARIDLSAVTAMDTVGAWTVWRLS 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ S ++L IS + P F+ + +G ++ Sbjct: 69 RDTGA--EIVACSEEAQKLVDAISKADSNAHSIEPP----RLPLFQRVPEKVGDAMIGLG 122 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + LG VI G +F+ +L+ QM VGV+ + ++ L+SF+ G VI Sbjct: 123 LGAVQVLGFLGQVILAIGTLVRHPSRFRM--KALVHQMELVGVNALAIIGLMSFLVGIVI 180 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGA QL QFGAEI++++L+ L LRE+GVL+TA+M+AGRSGSA A++G+MK+ EE+D Sbjct: 181 AQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 240 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PRI A ++ +PLL + F IIG + + IPF F +R Sbjct: 241 AMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARIQ 300 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L +++ G+ KAP + + +G V ++ +G + T VV +I +VI++D+ Sbjct: 301 EVVPLHDVWVGITKAPVFGLIVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLDA 360 Query: 363 LFAIFYFAIG 372 FA+F+ IG Sbjct: 361 FFAVFFTEIG 370 >gi|188993114|ref|YP_001905124.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. B100] gi|167734874|emb|CAP53086.1| ABC transporter permease [Xanthomonas campestris pv. campestris] Length = 370 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 119/364 (32%), Positives = 190/364 (52%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + L I + ++ K + F +G+ Sbjct: 74 EDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQGILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + G +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIGRLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|241661797|ref|YP_002980157.1| hypothetical protein Rpic12D_0175 [Ralstonia pickettii 12D] gi|240863824|gb|ACS61485.1| protein of unknown function DUF140 [Ralstonia pickettii 12D] Length = 374 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 97/371 (26%), Positives = 180/371 (48%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ ++ N +G+ ++ F Sbjct: 75 GNQWP--EHLDARPDQRRMLDRVAKLD-------PGGWKQRLAPRMNPVAILGEGMLDFF 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + ++G ++ + G F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHASNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|187927276|ref|YP_001897763.1| hypothetical protein Rpic_0168 [Ralstonia pickettii 12J] gi|309780024|ref|ZP_07674777.1| competence protein ComM [Ralstonia sp. 5_7_47FAA] gi|187724166|gb|ACD25331.1| protein of unknown function DUF140 [Ralstonia pickettii 12J] gi|308921194|gb|EFP66838.1| competence protein ComM [Ralstonia sp. 5_7_47FAA] Length = 374 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 97/371 (26%), Positives = 180/371 (48%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAFLSGDWTTLALAERAGVRSARQQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ ++ N +G+ ++ F Sbjct: 75 GNQWP--EHLDARPDQRRMLDRVAKLD-------PGGWKQRLAPRMNPVAILGEGMLDFF 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + ++G ++ + G F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHAGNGIAMVGQLVFDLGRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|77456265|ref|YP_345770.1| hypothetical protein Pfl01_0037 [Pseudomonas fluorescens Pf0-1] gi|77380268|gb|ABA71781.1| putative ABC transport system, permease [Pseudomonas fluorescens Pf0-1] Length = 382 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 118/367 (32%), Positives = 194/367 (52%), Gaps = 5/367 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G+W +E+ + +N +++ +DL+ + +DT GA L++ + Sbjct: 19 ARLRVTGDWTLAHYAEL-KQLSETLNGQYDANTP-IDLNGLGALDTAGASLLVELLGSER 76 Query: 67 GKIKLQGVSTHIEQL-FSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + I +L+ +R P + + L IG+ + D+ Sbjct: 77 LGKSAEHPDCTISSADRALLQTVYRSLTDFCVPIKEPEISVSVQLLTRIGRAVDTVWQDT 136 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +GL++ +++ +I + G+ P+V L++F+ GAV+A Sbjct: 137 LQLLGFVGLILETIARSLFRPKRWRI--TPMIAHIEQTGLDAAPIVALLTFLVGAVVAFL 194 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA L+ FGA +F++DL+ LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDAIR Sbjct: 195 GATVLASFGASVFTVDLVGFAFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIR 254 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD + +L+ PR+ AL+++LP+LT LA I+G ++V DI A+F S S Sbjct: 255 TLGLDPMELLVVPRVLALLVALPMLTFLAMICGIVGGAVVCAVSLDISPAMFLSLLQSDI 314 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GL+KAP A I + EGF V + S+G T+ VVQSI +VI++D++ A Sbjct: 315 GIQHFLVGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAA 374 Query: 366 IFYFAIG 372 +F+ +G Sbjct: 375 LFFMEMG 381 >gi|307945713|ref|ZP_07661049.1| ABC transporter permease protein [Roseibium sp. TrichSKD4] gi|307771586|gb|EFO30811.1| ABC transporter permease protein [Roseibium sp. TrichSKD4] Length = 382 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 133/366 (36%), Positives = 208/366 (56%), Gaps = 6/366 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W ++E V + +D SAI +DT GA L+ Sbjct: 23 VLCLSGDWTISSLAEAERLVESIMLDKY--RVTCLDTSAIDNLDTSGAWLVHRLRGSLEY 80 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + + E F+L R KP++S S GK++V D+ + Sbjct: 81 QGRRVELIGLTENRFNLFCQIERHHPPEYKPEKSKV--SLVGFLEATGKQVVNVGRDAIA 138 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 HILG + + +G ++ Q + VP+V L+SF+ GA+I+QQG Sbjct: 139 MLHILGSLGVVLSTVLLQPKRLRGI--AVAVQFDRTCIGAVPIVALMSFLIGAIISQQGG 196 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 F L QFGA+I+ +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ EE+DA+ + Sbjct: 197 FYLRQFGADIYVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALHVI 256 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL +L+ PRI AL+I+LP+LT +A+ +A++GA + W Y DIP A + ++ + T+ Sbjct: 257 GLSVTEVLVLPRILALMIALPVLTFIADMAALVGAGLTTWVYLDIPPAAYLTQLQAAITM 316 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ G++KAPFMA IG++A EG VG + SLG+ T VV++I +VI++D +FAIF Sbjct: 317 KTLWVGIVKAPFMALIIGLIACVEGLKVGGSAESLGRHTTMSVVKAIFLVIVVDGVFAIF 376 Query: 368 YFAIGI 373 + +I + Sbjct: 377 FASINV 382 >gi|116252407|ref|YP_768245.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257055|emb|CAK08149.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 389 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 156/371 (42%), Positives = 225/371 (60%), Gaps = 5/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ R GNW+S I + D + K ++ VDLS I+EIDT G L+ Sbjct: 23 ADGSGQRVRLQGNWRSAYIHLVLRDFEKLLQK--KTGDLSVDLSDISEIDTAGIWLLCRL 80 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + + ++ + K + P+++ + + IGK + Sbjct: 81 KKQEEAGGRTVRFEGTNSHIDEMLEMFSEEPAKVE-PEQTEKVSLAARIFAPIGKMTYEV 139 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 140 WDNFAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 197 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI Sbjct: 198 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 257 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA+ V W Y I FA F SR Sbjct: 258 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLGGAAAVAWGYSGITFANFLSRL 317 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 318 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTAAVVKAIFVVILMD 377 Query: 362 SLFAIFYFAIG 372 LFA+FY AI Sbjct: 378 GLFAMFYAAID 388 >gi|90422963|ref|YP_531333.1| hypothetical protein RPC_1452 [Rhodopseudomonas palustris BisB18] gi|90104977|gb|ABD87014.1| protein of unknown function DUF140 [Rhodopseudomonas palustris BisB18] Length = 377 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 128/373 (34%), Positives = 199/373 (53%), Gaps = 5/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ AG+W +P + V A S + +D+SA+ ++DT GA LI Sbjct: 10 IARGNGLALCAAGSWTAPFAPVLERIVAEAEALSGTRPNISIDVSAVAKLDTFGAWLIER 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ SL+ R K + S + +G+ + Sbjct: 70 LRRSLTQGDAEATIAGLSANYSSLVDEVRRVKDPEPSKRGGI---SLRAPVERLGRSVAG 126 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F++ + G V++ F+ L S + + V VP+V+LI+F+ G Sbjct: 127 FLDTIVGLVAMTGAVMAGMLRVVMHPGSFR--LTSTVHHLEQVCWRAVPIVMLITFLIGC 184 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++AQQG F +FGA++F +D++ +L LRE+GVLL A+M+AGRSGSA AE+GSMK+ EE Sbjct: 185 IVAQQGIFHFRKFGADVFVVDMLGVLVLRELGVLLVAIMVAGRSGSAYTAELGSMKMREE 244 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D + +LI PR+ AL++++P+LT L +A+ G +V W Y + F R Sbjct: 245 IDALRTMGFDPIDVLIMPRMMALVLAMPILTFLGVVAALYGGGLVAWLYGGVDPDAFLLR 304 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + G+IKAP MA IGIVA EG AV + SLG+ T VV+ I VI++ Sbjct: 305 LRDAISIDHFTVGMIKAPVMAIVIGIVACVEGLAVAGSAESLGRHTTASVVKGIFFVIVM 364 Query: 361 DSLFAIFYFAIGI 373 D +FAIF+ +IG+ Sbjct: 365 DGVFAIFFASIGM 377 >gi|27381176|ref|NP_772705.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354343|dbj|BAC51330.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 131/374 (35%), Positives = 205/374 (54%), Gaps = 10/374 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 R G+W + ++ + +S + +D+S ++ +DT+GA ++ Sbjct: 12 SGDGLKLRPQGSWTAANVAMLETLSRSVGADVDRSRAVTLDMSGVSALDTLGAWVLEKLS 71 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + GV+ H L + +R +GK V Sbjct: 72 RRAATSGRSAEFVGVADHFSGLMDEVREVNRHTPAPAAAPNPLLLR-----LGDLGKSTV 126 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 D +LG + + L SL+ Q+Y +G +P+V LI+F+ G Sbjct: 127 GAREDITIFLQMLGALFMAIFGVLRRPRSLR--LTSLVYQLYRIGWQAIPIVALITFLIG 184 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A+IAQQG F +FGAE +++D++ IL LRE+GVL+ A+M+AGRSGSA AE+GSMK+ E Sbjct: 185 AIIAQQGFFHFRRFGAESYTVDMVGILVLRELGVLIVAIMVAGRSGSAYTAELGSMKMRE 244 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ TMGLD V +LI PR+ AL+I+LP+L + + +A+ G +V Y D+ A++ + Sbjct: 245 EIDALSTMGLDPVGVLILPRVAALVIALPILAFIGSIAALYGGGLVAQFYGDMGPAIYIA 304 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R H ++ + G++KAPFMA IGIVA EG V + SLG++ TT VV+SI +VI+ Sbjct: 305 RLHEAISVTHFEVGILKAPFMALVIGIVACSEGLRVKGSAESLGRQTTTSVVKSIFLVIV 364 Query: 360 IDSLFAIFYFAIGI 373 +D LFAIF+ +IG+ Sbjct: 365 LDGLFAIFFASIGM 378 >gi|21230110|ref|NP_636027.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769899|ref|YP_244661.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. 8004] gi|21111638|gb|AAM39951.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575231|gb|AAY50641.1| ABC transporter permease [Xanthomonas campestris pv. campestris str. 8004] Length = 370 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 189/364 (51%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W A+ + +++ +D I ++D+ G ++ F + K Sbjct: 19 VRLAGSWVLATALPQAE-----LLQAVPDGVRRIDARGIGQLDSAGVLQLLRFASRMGLK 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + L I + ++ K + F +G+ Sbjct: 74 EDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQGILEL 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA G+ Sbjct: 128 NSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAFLGST 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAIRT+G Sbjct: 186 ILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAIRTLG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T L Sbjct: 246 LDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLR 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ A+++ Sbjct: 306 HFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWF 365 Query: 369 FAIG 372 +G Sbjct: 366 MKMG 369 >gi|120609009|ref|YP_968687.1| hypothetical protein Aave_0306 [Acidovorax citrulli AAC00-1] gi|120587473|gb|ABM30913.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1] Length = 375 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 90/370 (24%), Positives = 172/370 (46%), Gaps = 12/370 (3%) Query: 6 ITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V G W + ++ +V + ++ DL ++ +D +GA+L+ Sbjct: 16 GPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVDWLDHVGAQLLWNHWG 75 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + + + ++ P +G K++ + Sbjct: 76 RVWP--ERIALDDAQRDMLDRVAEFTVIDRPPVPPW------RLVEEVDRLGVKVLHALG 127 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++G ++ + G + + + +Y +G + +P+ ++ F+ G V+A Sbjct: 128 HGRHLLELVGQLVIDLGSALRAPRRAP--WRDVSGHLYRMGATALPITAIVGFLIGVVLA 185 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 186 YLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDA 245 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ L+ PR AL I++PL+ + A+ G + D+ A F + Sbjct: 246 MRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFVQALPN 305 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +N+ + K+ I ++ G V ++ SLG+ T VV +I++VII+D+L Sbjct: 306 AVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDAL 365 Query: 364 FAIFYFAIGI 373 FAI + +GI Sbjct: 366 FAIAFKNLGI 375 >gi|261855956|ref|YP_003263239.1| hypothetical protein Hneap_1358 [Halothiobacillus neapolitanus c2] gi|261836425|gb|ACX96192.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus c2] Length = 413 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 101/368 (27%), Positives = 193/368 (52%), Gaps = 8/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDL-SAITEIDTIGAELIMYFMEK 64 +TV +G W + + ++ + ++D + L S ++ D GA ++ ++ Sbjct: 52 VTVLVLSGTWTIHSLQHVPTLDTLSGAPTKKADKPCIVLRSEMSAFDGAGALVLARWIRT 111 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + + SL+ + + + + IG+ V+ ++ Sbjct: 112 WRADGFEVDLGEFPPRETSLLQLLDDRLVDTEPAPVKKPK-----MIARIGQFTVEQWHE 166 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + S LG ++ + ++ + ++I ++ GV + +V L+SF+ G V+A Sbjct: 167 TRSFLAFLGELVWRGAPLLLTFWRIR--WRAVISEIDAAGVRALGIVGLLSFMIGMVMAY 224 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L +GA + +DL+ I+ LRE+G LL A+++AGR+GS+ A++G+M+I EEIDA+ Sbjct: 225 QGGATLQNYGANVLIVDLVGIITLREMGPLLAAIIVAGRTGSSYTAQLGTMRITEEIDAL 284 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G+ ILI P++ ALII+LPLL+I ++ ++G ++V + + F+V+F R Sbjct: 285 RAIGVPPFEILIFPKVLALIITLPLLSIFSDLMGLLGGAVVANYGFGVSFSVYFDRMPEA 344 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +L ++ GL+K P A I ++ +G V + +G T VVQ+I +VI+ID+LF Sbjct: 345 VSLTTLWLGLLKTPVFAIVIALIGCMQGLRVRGSAAEVGHATTVSVVQAIFMVIVIDALF 404 Query: 365 AIFYFAIG 372 ++ Y +G Sbjct: 405 SVLYNVMG 412 >gi|319956950|ref|YP_004168213.1| hypothetical protein Nitsa_1211 [Nitratifractor salsuginis DSM 16511] gi|319419354|gb|ADV46464.1| protein of unknown function DUF140 [Nitratifractor salsuginis DSM 16511] Length = 371 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 106/369 (28%), Positives = 175/369 (47%), Gaps = 16/369 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63 T+ G+W + I ++ ++ +D + D+ G L++ M+ Sbjct: 15 TLIECQGDWTLDQARLIEKELRRL--PLPETPRCRIDFGKVQRFDSAGILLLLELRERMK 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K ++ G+ E++ LI + ++ + L + IGK V+ + Sbjct: 73 KAGKACEITGLDEKKEKMLHLIERGYGEE---------PLPKRREGLLWRIGKATVEELK 123 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 H LG + + F+ + + + GV+ + ++ L SF+ G VIA Sbjct: 124 VVRDFFHFLGELSVSFLRLLFKPSNFRM--RETVYHIQHSGVNALFIIGLTSFLVGLVIA 181 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL QFGA+I+ +D + I RE+G ++TA++IAGRS S+ AEIG+MKI EEI A Sbjct: 182 YESLVQLVQFGADIYVVDGIGIAITRELGPMITAIVIAGRSASSYAAEIGTMKITEEIAA 241 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++T+G D L+ PRI A++I+LPLL ++ I+G I D+ F F R Sbjct: 242 MQTLGFDPFYFLVIPRIVAMMIALPLLIFFSDVIGILGGMIATKVQVDLSFTFFIERLQE 301 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + G++K PF A I GF V + S+G + T VV +I VI D+L Sbjct: 302 VLAAKHYILGIVKGPFFALIIAATGCFHGFRVTGDTESIGIETTASVVHAIFFVIACDAL 361 Query: 364 FAIFYFAIG 372 FA+ Y +G Sbjct: 362 FAVIYTQLG 370 >gi|118588764|ref|ZP_01546172.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614] gi|118438750|gb|EAV45383.1| hypothetical protein SIAM614_18699 [Stappia aggregata IAM 12614] Length = 382 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 132/365 (36%), Positives = 205/365 (56%), Gaps = 6/365 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W I++ ++ + +D+S I +DT GA LI + + Sbjct: 24 LALSGDWTVSTIADAERELNGLTLD--KKRLTCIDVSRIEHLDTSGAWLIHRTRGRLEFE 81 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + G+S +L + KP F S G+++V +D+ + Sbjct: 82 GRKVGLSGVSPVRKTLFEEIENHHPPSWKPDPGGF--SIAGFLEATGRQMVDVYHDALAM 139 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 HILG + + + S+ Q + VP+V L+SF+ GA+I+QQG F Sbjct: 140 LHILGSLGLVLSTVLLQPKRLRSI--SIAVQFDRSCIGAVPIVALMSFLIGAIISQQGGF 197 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L QFGA+IF +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ EE+DA+ +G Sbjct: 198 YLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVDALHVIG 257 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L +L+ PRI AL+I+LP+LT +++ +A+ G+ +V W Y DIP A F ++ + T+ Sbjct: 258 LSVTEVLVLPRILALMIALPILTFISDLAALFGSGMVTWAYLDIPPAAFLTQLQAAITIN 317 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL+KAPFMA +G++A EG V S SLG+ T VV++I +VI++D FAIF+ Sbjct: 318 TLVVGLVKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMSVVKAIFLVIVVDGFFAIFF 377 Query: 369 FAIGI 373 AIG+ Sbjct: 378 AAIGV 382 >gi|85707661|ref|ZP_01038727.1| ABC-type transport system permease component [Erythrobacter sp. NAP1] gi|85689195|gb|EAQ29198.1| ABC-type transport system permease component [Erythrobacter sp. NAP1] Length = 370 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 115/370 (31%), Positives = 190/370 (51%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G T+ +G I ++ ++ + VDLS + E+DT+GA ++ F Sbjct: 13 EGGGTMLALSGPLLVSTIGKLERELSRL-----GHEVGRVDLSDVEEMDTVGAWVVCRF- 66 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 H + G + ++L + + ++ + +G+K+ Sbjct: 67 -ATHQSAAITGTTPSAKRLLEAVEAA-----SSDVEITPDRTPVWERVPLALGEKVYAAR 120 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + G ++ G F L + +RQM VGV+ +P++ L+SF+ G VI Sbjct: 121 SGVYGVVGFFGQILIGFGSLLRHPSTFP--LKATVRQMEMVGVAALPIIGLMSFLIGIVI 178 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGA QL+QFGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A+IG+MK+ EE+D Sbjct: 179 AQQGAVQLAQFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEVD 238 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PRI A + +L A+ I+G ++V IPF F R Sbjct: 239 AMRTIGISPIERLVIPRILACTFMMVVLGFYASIVGIVGGAVVGHLSLGIPFFTFLERIQ 298 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L +++ GL+KAP + + G V +S +G + T VV +I VI++D+ Sbjct: 299 EVVPLHDVWVGLVKAPVFGLIVALAGCYHGMQVKGNSEQVGIRTTMAVVSAIFAVIVLDA 358 Query: 363 LFAIFYFAIG 372 FA+F+ IG Sbjct: 359 FFAVFFTEIG 368 >gi|222086200|ref|YP_002544732.1| ABC transporter [Agrobacterium radiobacter K84] gi|221723648|gb|ACM26804.1| ABC transporter [Agrobacterium radiobacter K84] Length = 386 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 151/370 (40%), Positives = 223/370 (60%), Gaps = 4/370 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +R GNW+S + + + +S ++DLS ++++DT GA LI Sbjct: 20 DGNGHRYRLEGNWRSANVHGVLRRIDELTTRS-AGGRVVIDLSDLSDVDTAGALLIRRLK 78 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 E + + L+ + +KP+ + + + IG+ + + Sbjct: 79 ESQEAHGASVSIEGSNSHIDELL-TAFTEDPDAEKPEPRQKKSWTERIFAPIGETVYEVW 137 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + +ILG + S++ Q+ ++GV VP+++L+S++ GA+I Sbjct: 138 GNLVAAMYILGSAVRGAQLKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSYLIGAII 195 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+D Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVD 255 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MGL+ + +LI PR+ AL ++LPLLTILANF+++ GA+ V W Y I FA F +R H Sbjct: 256 ALKVMGLNPIGVLIFPRLVALTVALPLLTILANFASLFGAATVTWAYSGITFATFIARLH 315 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +L+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV+SI +VI++D Sbjct: 316 EAISLSTVISGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKSIFVVILMDG 375 Query: 363 LFAIFYFAIG 372 LFA+FY AI Sbjct: 376 LFAMFYAAID 385 >gi|218886600|ref|YP_002435921.1| hypothetical protein DvMF_1505 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757554|gb|ACL08453.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 430 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 121/374 (32%), Positives = 200/374 (53%), Gaps = 11/374 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVM-------AINKSIQSDSAIVDLSAITEIDTIGAELIM 59 V F+G W I + ++ A + + +DL+ +T +DT GA+L+ Sbjct: 61 LVLTFSGVWDVASIGRMTARLLRRCAEVGNACSVQGDAPVVHLDLAEVTRLDTAGAQLLC 120 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 V H+ + + I R+ + IG IV Sbjct: 121 RAA--ASMATAGARVVWHVSDHGQSMLLDRVRAIDISAVPRARRISPVVGALNAIGGSIV 178 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + + LG+ + + A ++ + +S++ M G+ VP+V L++F+ G Sbjct: 179 EELEQARAIIGFLGMFLVSLAAAVARPWRLR--WVSIVHHMEQTGIQAVPIVALLTFLIG 236 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V A G+ Q ++FGA++F ++L+ + LRE+GVLLTA+++AGRSGS+ A+IG+M NE Sbjct: 237 LVTAYMGSEQFTRFGAQVFVVNLIEVSTLRELGVLLTALIVAGRSGSSFTAQIGAMVANE 296 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R+MGLD + +L+ PR+ AL++ LP+LT +A+F ++G I W I F Sbjct: 297 EVDAMRSMGLDPMEVLVIPRVVALVLMLPVLTFIADFMGVLGGGIASWLSLGISPGAFAV 356 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 RF LAN TGL+KAPF A IGIV +GF V + S+G+ T VV+SI +VI+ Sbjct: 357 RFQEITRLANFVTGLVKAPFFALIIGIVGCFQGFRVTGSAESVGRLTTQAVVESIFLVIV 416 Query: 360 IDSLFAIFYFAIGI 373 ++ FAI + ++G+ Sbjct: 417 ANAGFAILFMSLGV 430 >gi|326315184|ref|YP_004232856.1| hypothetical protein Acav_0366 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372020|gb|ADX44289.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 375 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 12/370 (3%) Query: 6 ITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V G W + E+ + + K+ + DL + +D +GA+L+ Sbjct: 16 GPVAALLGRWGAAELGTRPAWKALSAQLAKTPPAAGLGWDLRGVEWLDHVGAQLLWNHWG 75 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + + ++ + + P+ + +G K++ + Sbjct: 76 REWPERLSVDGAQ-----RDMLERVAEYTVTRRPPESPWR---LAEEVDRLGVKVLSALG 127 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++G ++ + + + + +Y +G + +P+ ++ F+ G V+A Sbjct: 128 HGRHLLELVGQLMIDLVRVVRAPRRAP--WRDISGHLYRMGATALPITAIVGFLIGVVLA 185 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 186 YLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDA 245 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ L+ PR AL I++PL+ + A+ G + ++ A F + Sbjct: 246 MRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMNVSPAYFVQALPN 305 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +N+ + K+ I ++ G V ++ SLG+ T VV +I++VII+D+L Sbjct: 306 AVGFSNLVLAMGKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDAL 365 Query: 364 FAIFYFAIGI 373 FAI + +GI Sbjct: 366 FAIAFKNLGI 375 >gi|86748498|ref|YP_484994.1| hypothetical protein RPB_1373 [Rhodopseudomonas palustris HaA2] gi|86571526|gb|ABD06083.1| Protein of unknown function DUF140 [Rhodopseudomonas palustris HaA2] Length = 378 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 204/373 (54%), Gaps = 4/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ + G W + + + ++ + + +D++ + EIDTIGA L+ Sbjct: 10 VTQGDVLRLHPGGAWIAMHTAVLERLFDGVASQVAAAKALEIDMTDVVEIDTIGAWLLEK 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + ++ LI + + KP+ N IG+ Sbjct: 70 VSRDAAQAGRTAQFVGVADRYAGLIEEVRQVNRRGPKPR--PSVNPIIARLDQIGRSAWS 127 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D +LG + + L SL Q+Y VG +P+V+LI+F+ GA Sbjct: 128 ATQDISVFLAMLGALGVALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIVVLITFLIGA 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EE Sbjct: 186 IIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMGLD V +LI PRI AL+I+LP+LT + + +A+ G + W Y + AV+ +R Sbjct: 246 IDALTTMGLDPVEVLILPRIIALVIALPILTFIGSMAALYGGLLTAWFYGGMQPAVYIAR 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI++ Sbjct: 306 LHEAVSLNSFEVGIWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVL 365 Query: 361 DSLFAIFYFAIGI 373 D LFA+F+ +IG+ Sbjct: 366 DGLFAVFFASIGM 378 >gi|146341950|ref|YP_001206998.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146194756|emb|CAL78781.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 377 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 135/371 (36%), Positives = 202/371 (54%), Gaps = 5/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E R G W +P + V A + +S + +D+S ++++DT GA LI Sbjct: 12 EGNALALRATGAWTAPFAPALERLVADAEKLAGKSGNVSIDVSQVSKLDTFGAWLIERLR 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + SL+ R + P + + IG+ + + Sbjct: 72 RSFTTGTVEARIDGLSANYASLVDEVRRVSL---APGDDATNVTITGMLGQIGRSVAGIV 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +LG VI +G F+ L S I + V VP+++LI+F+ G +I Sbjct: 129 GTVAALIDMLGAVIVASGRVLVHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLIGCII 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA AE+GSMK+ EEID Sbjct: 187 AQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMREEID 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G +V W Y + F R Sbjct: 247 ALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLR 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + GL+KAP MA IGIVA EG AV + SLG+ T+ VV+ I VI++D Sbjct: 307 DAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVEGSAESLGRHTTSSVVKGIFFVIVMDG 366 Query: 363 LFAIFYFAIGI 373 +FAIF+ A+G+ Sbjct: 367 VFAIFFAAVGM 377 >gi|325982943|ref|YP_004295345.1| hypothetical protein NAL212_2362 [Nitrosomonas sp. AL212] gi|325532462|gb|ADZ27183.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212] Length = 370 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 85/372 (22%), Positives = 176/372 (47%), Gaps = 11/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++G G++ + + + +++ ++ + DL+ I +IDT G L+ Sbjct: 9 TKDGSPHIILTGDYTLATLESLLKPLEDELSREARNQNLYWDLTGIGQIDTAGTILLWRV 68 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + E++F + Q + +GK ++ Sbjct: 69 WKTKRPDRLQ--LRPEHEKMFQRLERLPTH-------QSGIKHRDLLWPITTLGKLVLVL 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S ++G ++ + + +Y G + + L+ F+ G V Sbjct: 120 WQHSVGLITLIGQLMLDVIYLIRHPVYIP--WREISANLYRTGAQALGITALVGFLIGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ + QL FGA+IF I+++ I +RE+G +L A+++AGRSGSA+ A++G M++ +E+ Sbjct: 178 LSYLSSKQLQLFGADIFIINILGISIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTQEL 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ + LI P++ L I++PLL + + A++G + + + F + Sbjct: 238 DALTVMGISHSQRLILPKVLGLGIAMPLLVMWTSAVALLGGMVAAEIQLGLHYHYFITAL 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + N++ GL K I ++A G + ++ SLG+ T VV +I++VIIID Sbjct: 298 PDSVPVGNLWLGLGKGIVCGMVIALIACHFGLKIKPNTESLGEGTTASVVTAITMVIIID 357 Query: 362 SLFAIFYFAIGI 373 ++FA+ + +G+ Sbjct: 358 AIFAVLFSDVGL 369 >gi|39937298|ref|NP_949574.1| hypothetical protein RPA4238 [Rhodopseudomonas palustris CGA009] gi|39651156|emb|CAE29679.1| putative permease of ABC transporter [Rhodopseudomonas palustris CGA009] Length = 378 Score = 265 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + G W + + + + S +D++ I EIDTIGA ++ Sbjct: 11 ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 70 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + +G+ST +L + +R+ P N IG+ Sbjct: 71 SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 125 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 D +LG + + + L SL Q+Y VG +P+++LI+F+ Sbjct: 126 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 183 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 184 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 243 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF Sbjct: 244 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 303 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI Sbjct: 304 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 363 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFA+F+ +IG+ Sbjct: 364 VLDGLFAVFFASIGM 378 >gi|319783795|ref|YP_004143271.1| hypothetical protein Mesci_4108 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169683|gb|ADV13221.1| protein of unknown function DUF140 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 395 Score = 265 bits (678), Expect = 8e-69, Method: Composition-based stats. Identities = 147/369 (39%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G+ F+G W + ++ + D + I K + +D+S I ++DT GA LI + Sbjct: 28 EDGVLGCAFSGIWTTRTVA-LVDADMRKIEKRSGFKTLALDVSKIEKMDTAGAWLIDRLV 86 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + K + E L+ + + N +G+++ + Sbjct: 87 SAFEKKGVEIQMQGQSEIASILLEAVGEAVRREPESGPVRPPNIVIRALEAVGRRVYEMR 146 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +D + +ILG I + ++ Q+ +GV +PVV+L+S + GA++ Sbjct: 147 DDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIVGAIV 204 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ EE+D Sbjct: 205 AQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMREEVD 264 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G + W Y DIP A F R Sbjct: 265 ALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGILAAWLYSDIPPAAFIDRLR 324 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VII+D Sbjct: 325 VAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDG 384 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 385 LFAMFYAAI 393 >gi|148256837|ref|YP_001241422.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146409010|gb|ABQ37516.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. BTAi1] Length = 377 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 196/371 (52%), Gaps = 5/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E R G W +P + V A + + +D+S ++ +DT GA LI Sbjct: 12 EGSALSLRATGAWTAPFAPSLERLVADAEKLAGKKIDVSIDVSEVSRLDTFGAWLIERLR 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + SL+ R P + + IG+ + Sbjct: 72 RSFTTGTAEARIDGLSANYASLVDEVRRVSA---APDGDATAVTITGMLGQIGRSVAGIF 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +LG VI +G F+ L S I + V VP+++LI+F+ G +I Sbjct: 129 GTVAALIDMLGAVIVASGRVFIHPRSFR--LTSTIHHLEQVCWRAVPIIVLITFLIGCII 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGA+IF +D++ +L LREIGVLL A+MIAGRSGSA AE+GSMK+ EEID Sbjct: 187 AQQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMIAGRSGSAYTAELGSMKMREEID 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RTMG D + +LI PR+ AL+I+LP+L+ L + +A+ G +V W Y + F R Sbjct: 247 ALRTMGFDPIEVLILPRMLALVIALPILSFLGDIAALYGGGLVAWFYGGVDPEAFLLRLR 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ + GL+KAP MA IGIVA EG AV + SLG+ T+ VV+ I VI++D Sbjct: 307 EAISIDHFTVGLLKAPVMAAVIGIVACVEGLAVQGSAESLGRHTTSSVVKGIFFVIVMDG 366 Query: 363 LFAIFYFAIGI 373 +FAIF+ +G+ Sbjct: 367 VFAIFFATVGM 377 >gi|192293078|ref|YP_001993683.1| hypothetical protein Rpal_4717 [Rhodopseudomonas palustris TIE-1] gi|192286827|gb|ACF03208.1| protein of unknown function DUF140 [Rhodopseudomonas palustris TIE-1] Length = 382 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 10/375 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + G W + + + + S +D++ I EIDTIGA ++ Sbjct: 15 ADGDTLELKPKGAWTATNSKFMEQLSQDVAPQIAAAKSLTIDMAEIGEIDTIGAWVLEKL 74 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + +G+ST +L + +R+ P N IG+ Sbjct: 75 SRSAAQAGRTAQFKGISTSYAELIDEVRQLNRRG-----PTPHPKPNPIIAKLDEIGRSA 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 D +LG + + + L SL Q+Y VG +P+++LI+F+ Sbjct: 130 WSATTDMAVFLEMLGALGAALLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLI 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA+IAQQG F +FGAE + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ Sbjct: 188 GAIIAQQGIFHFRKFGAESYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMR 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF Sbjct: 248 EEIDALSTMGLDPVEVLILPRIIALVIALPILAFVGSMAALYGGLLTAWFYGGMQPSVFI 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R H +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI Sbjct: 308 ARLHEAVSLNSFEVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVI 367 Query: 359 IIDSLFAIFYFAIGI 373 ++D LFA+F+ +IG+ Sbjct: 368 VLDGLFAVFFASIGM 382 >gi|325923308|ref|ZP_08184981.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325546235|gb|EGD17416.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] Length = 370 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 118/368 (32%), Positives = 189/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R AG+W A+ + +++ +D I ++D+ G ++ F + Sbjct: 15 DHAQVRLAGSWVLATALPQAE-----LLQAVPDGIRRIDARGIAQLDSAGVLQLLRFASR 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L I + ++ K + F +G+ Sbjct: 70 MGLKEDAIDFRDEHQALVCTIEELNDERPKPK------RDYGFVAALDRLGRTTHGVGQG 123 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +F+ L S + M VG+ VP+V+L+S++ GAVIA Sbjct: 124 ILELNSFLGENLVKIARLIHEPRRFR--LTSTVHHMEQVGLDAVPLVVLLSYLVGAVIAF 181 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EE+DAI Sbjct: 182 LGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDAI 241 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD + +L+ PR+ ALI +LPLLT +A + + G V DIP ++ +R H T Sbjct: 242 RTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDT 301 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VII+D++ Sbjct: 302 IQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIA 361 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 362 ALWFMKMG 369 >gi|316935758|ref|YP_004110740.1| hypothetical protein Rpdx1_4456 [Rhodopseudomonas palustris DX-1] gi|315603472|gb|ADU46007.1| protein of unknown function DUF140 [Rhodopseudomonas palustris DX-1] Length = 382 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 134/371 (36%), Positives = 196/371 (52%), Gaps = 4/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G W + + A + + S +D++AI EIDTIGA ++ Sbjct: 16 DGDTLELEPTGAWTATNSKIMEQLSAGAAQQIASAKSLTIDMAAIGEIDTIGAWVLEKLS 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + LI + + P N IG+ Sbjct: 76 RSAAEAGSPAQFKGIADSYAELIDEVRQLNRRGPTPH--PKPNPIIAKLDEIGRSAWSAT 133 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D +LG + + L SL Q+Y VG +P+++LI+F+ GA+I Sbjct: 134 ADIAVFLQMLGALGVAVLGVLRRPRSLR--LTSLTYQVYRVGWQAIPIMVLITFLIGAII 191 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGA+ + +D++ IL LREIGVL+ A+M+AGRSGSA AE+GSMK+ EEID Sbjct: 192 AQQGIFHFRKFGADSYVVDMVGILVLREIGVLIVAIMVAGRSGSAYTAELGSMKMREEID 251 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TMGLD V +LI PRI AL+I+LP+L + + +A+ G + W Y + +VF +R H Sbjct: 252 ALSTMGLDPVEVLILPRIIALVIALPILAFIGSMAALYGGLLTAWFYGGMQPSVFIARLH 311 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +L + G+ KAPFMA IGIVA EG V + SLG + TT VV+SI +VI++D Sbjct: 312 EAVSLNSFQVGMWKAPFMALVIGIVACSEGLRVKGSAESLGLQTTTSVVKSIFLVIVLDG 371 Query: 363 LFAIFYFAIGI 373 LFA+F+ +IG+ Sbjct: 372 LFAVFFASIGM 382 >gi|70733612|ref|YP_257252.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68347911|gb|AAY95517.1| ABC transporter, permease protein, putative [Pseudomonas fluorescens Pf-5] Length = 382 Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats. Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 5/367 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G+W S++ + S +DL+ + +DT GA L++ + Sbjct: 19 AQLRIGGDWTLAHYSDLKRLSQSLDGRY--DSSTHIDLNGLGALDTAGASLLVELLGAER 76 Query: 67 GKIKLQGVS-THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + T +L+ + P + + L IG + D+ Sbjct: 77 LGQSAEHPDCTLSAADRALLHTVYTSLNDFCVPVKEPEISVSVQLLSRIGSAVYTVWQDT 136 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +GL++ +++ ++ + G+ P+V L++F+ GAV+A Sbjct: 137 LKVLGFIGLILETLARGLLRPKRWRI--TPVVAHIEQTGLDAAPIVALLTFLVGAVVAFL 194 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 GA L+ FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDAIR Sbjct: 195 GATVLANFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIR 254 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+GLD V +L+ PR+ AL++SLP+LT LA S I+G ++V DI A+F S HS Sbjct: 255 TLGLDPVELLVLPRVLALLVSLPMLTFLAMLSGIVGGAVVCALSLDISPAMFLSLLHSDI 314 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GL+KAP A I + EGF V + S+G T+ VVQSI +VI+ID++ A Sbjct: 315 GVKHFLLGLVKAPIFAFLIAAIGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVIDAVAA 374 Query: 366 IFYFAIG 372 +F+ +G Sbjct: 375 LFFMEMG 381 >gi|307297001|ref|ZP_07576817.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum L-1] gi|306877527|gb|EFN08755.1| protein of unknown function DUF140 [Sphingobium chlorophenolicum L-1] Length = 376 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 114/370 (30%), Positives = 195/370 (52%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G TV R +GN + ++ + + I+ +DLS + +DTIGA ++ + Sbjct: 19 REGRTVIRLSGNLSIACLHDLPNRLDA-----IEGPVDTIDLSGVDHMDTIGAWVLHRTI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + G E+L + + R ++ + IG+ +V Sbjct: 74 KRLDCK--ITGDKCDAERLITTVGSVDE-----PVNIRPDHEPPWQRVVGQIGEAVVNSG 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + T +F+ +++++ VGVS + ++ L+SF+ G VI Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFRIN--AVVQRFEVVGVSALGIIGLMSFLIGIVI 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EE+D Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PR A+++ +PLL+ A+ AIIG + DIP F R Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLSFYASIVAIIGGGFLCAVSLDIPPITFVQRLR 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI++D+ Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVLDA 364 Query: 363 LFAIFYFAIG 372 FA+F+ +G Sbjct: 365 FFAVFFTWVG 374 >gi|217969575|ref|YP_002354809.1| hypothetical protein Tmz1t_1154 [Thauera sp. MZ1T] gi|217506902|gb|ACK53913.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 385 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 113/373 (30%), Positives = 197/373 (52%), Gaps = 5/373 (1%) Query: 1 MSENGIT-VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 ++ +G+ V R G+W + + + + V+L+ + +DT GA L+ Sbjct: 16 LAGDGVAAVLRLRGDWTLAHHAALRRQADAL--RGRIDAATRVELAELGTLDTAGARLLH 73 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + L + +L+ ++ + + ++ HIG ++ Sbjct: 74 GLLGGERVAALLADEGALSRERRALLKAVADAIEGREERPAADEGYALGDVLAHIGHTML 133 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F + +GL++ +++ +L+ + G+ VP++ L++F+ G Sbjct: 134 VFWRHVSALTGFIGLILETALRVSVQPRRWRV--TALVANLERTGLDAVPIIALLTFLVG 191 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L FGA IF++DL++ LRE GVLLTA+++AGR+ S+ A+IGSM+ NE Sbjct: 192 AVVAFLGATVLQNFGASIFTVDLVAYSFLREFGVLLTAIIVAGRTASSFTAQIGSMRANE 251 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDAIR +GLD V +L+ PR++AL+++LP+LT +A + I+G +V DI +F S Sbjct: 252 EIDAIRVLGLDPVELLVLPRVYALLVALPILTFVAMIAGIVGGMLVSAMTLDISPVLFLS 311 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R L + + G+ KAP A I ++ EGF V + S+G+ T+ VVQSI +VI+ Sbjct: 312 RIEDNVGLIHFWVGMAKAPIFAFLIAVIGCLEGFRVQGSAQSVGEHTTSAVVQSIFVVIV 371 Query: 360 IDSLFAIFYFAIG 372 +D++ A+F +G Sbjct: 372 VDAIAALFCMEMG 384 >gi|330806719|ref|YP_004351181.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374827|gb|AEA66177.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 382 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 116/363 (31%), Positives = 193/363 (53%), Gaps = 7/363 (1%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--EKYHGK 68 G+W +++ + ++ ++ +DL+ + +DT GA L++ + E+ Sbjct: 23 VGGDWTLAHYAQL-KRLSESLRGQYDENTL-IDLNGLGALDTAGASLLVELLGSERLGKT 80 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + S + +L+ + P + L IG+ + K D+ Sbjct: 81 TEHPDCSLPAAE-RALLQTVYCSLTDFCVPVKEPQVGVLTQLLTRIGRAVEKVWQDTLQL 139 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL++ +++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 140 LGFVGLILETLARNLLRPRRWRM--TPMVVHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 197 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 198 VLADFGASIFTVDLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 257 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD V +L+ PR+ AL+++LP+LT LA S IIG +V I A+F + S + Sbjct: 258 LDPVELLVIPRVLALLVALPMLTFLAMLSGIIGGGVVCALSLGISPAMFLTLLQSDIGVQ 317 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G++KAP A I V EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 318 HFLVGMVKAPIFAFLIAAVGCLEGFKVSGSAESVGAHTTSSVVQSIFVVIVLDAVAALFF 377 Query: 369 FAI 371 + Sbjct: 378 MEM 380 >gi|313496513|gb|ADR57879.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 374 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 7/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + ++ A DLS + +DT GA L+ + Sbjct: 17 LRITGDWTLAHYASLKRESERLRSQCPADTVA--DLSQLGRLDTAGASLLAELLGSERLS 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + L + P + N L IG+ + DS Sbjct: 75 RCTHALPEASQALL---KNVYCSVQDYCIPVKEPERNVLLLLLERIGRAVGTLWQDSMQL 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 132 LGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 190 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 250 LNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGVQ 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 310 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 369 Query: 369 FAIG 372 +G Sbjct: 370 MEMG 373 >gi|148545417|ref|YP_001265519.1| hypothetical protein Pput_0160 [Pseudomonas putida F1] gi|148509475|gb|ABQ76335.1| protein of unknown function DUF140 [Pseudomonas putida F1] Length = 377 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 188/364 (51%), Gaps = 7/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W + + + ++ + + I DLS + +DT GA L+ + Sbjct: 20 LRITGDWTLAHYANLKRESERL--RTQCAANTIADLSQLGRLDTAGASLLAELLGSERLS 77 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + L + P + N L IG + DS Sbjct: 78 RCTHALPEASQALL---KNVYCSVQDYCIPVKEPERNVLLLLLERIGCAVGTLWQDSMQL 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 135 LGFVGVILETLLRRAFQPHRWR--FTPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 193 VLADFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL+ISLPLLT +A I+G ++V DI A+F S S + Sbjct: 253 LNPMELLVVPRVLALLISLPLLTFVAMICGIVGGAVVCALTLDISPAMFLSLLQSDIGVQ 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 313 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 372 Query: 369 FAIG 372 +G Sbjct: 373 MEMG 376 >gi|114570554|ref|YP_757234.1| hypothetical protein Mmar10_2004 [Maricaulis maris MCS10] gi|114341016|gb|ABI66296.1| protein of unknown function DUF140 [Maricaulis maris MCS10] Length = 384 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 185/371 (49%), Gaps = 5/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E T+ G+W I D+ + A+ S S +VD+S + +DT GA L+ Sbjct: 19 EGERTILEPHGDWVIDTIGR-HDNAIRAVEASADPCSIVVDVSHLGRVDTAGAYLLGRAT 77 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K + LI + + F F +G I Sbjct: 78 RKCPTPDADFHFVGQHRTVRRLIEEVRMRTQVCGPDEVPTF--GFIKALARLGAGIEVAY 135 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ G ++ ++F+ L + M VGV+ +P+V ++F GAV+ Sbjct: 136 QEAVDTFAFFGKTLTTGLSCFIQPWRFR--LTPTVWAMEEVGVNALPIVATLTFFIGAVV 193 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L FGA +F++DL+ + LRE GVL+TA+M+A RS SA A IG+MK+ +EID Sbjct: 194 AYMGATLLQSFGASVFTVDLVGLAVLREFGVLITAIMLAARSDSAFTASIGAMKMQQEID 253 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +GLD L+ PR+ A ++ PLLT A + I G +V W DI A+FF+R H Sbjct: 254 AMRVLGLDPYEALVLPRVVACVLMAPLLTFGAMVAGIFGGMLVAWTAQDISPALFFTRLH 313 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S +++ + G+ KAP + I+ ++G V SLG++VT VVQSI +I++++ Sbjct: 314 SEIDISHFWVGMSKAPVFGMVVAIIGCRQGMQVQGDVESLGRRVTASVVQSIFAIIVLEA 373 Query: 363 LFAIFYFAIGI 373 LFA+ Y + I Sbjct: 374 LFAMMYLELEI 384 >gi|13470959|ref|NP_102528.1| permease of ABC transporter [Mesorhizobium loti MAFF303099] gi|14021702|dbj|BAB48314.1| permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 395 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 149/369 (40%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G+ F+G W + ++ + D + I K + +DLS I +IDT GA LI + Sbjct: 28 EAGVLGCAFSGIWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRLV 86 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + K + E L+ + + + N +G+++ + Sbjct: 87 SAFEKKNVEVRLQGQSEIASILLDAVGEAVRREPESGPARPPNIIIRALEAVGRRVYEMR 146 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +D + +ILG I + ++ Q+ +GV +PVV+L+S + GA++ Sbjct: 147 DDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIVGAIV 204 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ EE+D Sbjct: 205 AQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMREEVD 264 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G + W Y DIP A F R Sbjct: 265 ALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFIDRLR 324 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VII+D Sbjct: 325 VAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDG 384 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 385 LFAMFYAAI 393 >gi|78777725|ref|YP_394040.1| hypothetical protein Suden_1528 [Sulfurimonas denitrificans DSM 1251] gi|78498265|gb|ABB44805.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 373 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 188/371 (50%), Gaps = 8/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +F G + + ++ + ++ ++DL ++ +D+ G+ + Sbjct: 11 SDNKLSLKFKGELTLYNLMKYKKEIDKIAFS--KENAVVIDLLELSFLDSAGSIFLNNLQ 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K ++ H + ++ +KI + +N IG+K K Sbjct: 69 KELELKELKVDITCHNRDVLDMLELIRVQKITL----KKIAKKKKRNRVEKIGEKSYKAY 124 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 S +G + S+ + S + + +M + + ++ L SF+ G V+ Sbjct: 125 LGILSFMAFMGELFSHKLRYLISFKNIRH--KEIAFEMNECAIKALGIISLTSFLIGVVV 182 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q A+QL +GA IF +D++ + LRE+ L+TA++IAGRSGSA A+IG+MKI +E+D Sbjct: 183 AYQSAYQLKLYGANIFIVDMLGLSILRELSPLITAIVIAGRSGSAFTAQIGAMKITQELD 242 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG D R L+ P+I AL+I++PLL +++ AIIG IV +I +F RF+ Sbjct: 243 AMQTMGFDPYRFLVVPKIIALMITMPLLIFVSDIMAIIGGMIVANLDLNITVDMFLDRFN 302 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + G+ K PF A I +A+ +G V + S+G T VV+SI VII D+ Sbjct: 303 EVINIKHFIVGISKGPFFAFLIATIAIYQGLLVKDDTQSIGLNTTKSVVESIFAVIICDA 362 Query: 363 LFAIFYFAIGI 373 +F+I + +GI Sbjct: 363 IFSIAFTNLGI 373 >gi|254502466|ref|ZP_05114617.1| conserved domain protein [Labrenzia alexandrii DFL-11] gi|222438537|gb|EEE45216.1| conserved domain protein [Labrenzia alexandrii DFL-11] Length = 382 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 131/371 (35%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G +G+W +++ + + +D+S + +DT GA LI Sbjct: 18 SEGHQSLILSGDWTVSTLADADQQISKL--NVAKDKLTCIDVSEVDHLDTSGAWLIHRTR 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + ++ SL + +P RS F + G+++V+ Sbjct: 76 GQLEFSGRKVQLTGVTPVRESLFHEIEKHHPPRWQPDRSGF--TIVGFLEATGRQMVEVY 133 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D+ + HILG + + + ++ Q + VP+V L+SF+ GA+I Sbjct: 134 KDTLAMLHILGSLGIVLSTVLLQPKRLRSI--AIAVQFDRSCIGAVPIVALMSFLIGAII 191 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 +QQG F L QFGA+IF +DL IL LREIGV+LTA+M+AGRSGSA AE+G+M++ EE+D Sbjct: 192 SQQGGFYLRQFGADIFVVDLAGILVLREIGVILTAIMVAGRSGSAFTAELGAMRMQEEVD 251 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL +L+ PRI AL+I+LP+LT +A+ SA+ GA ++ W Y DIP A F ++ Sbjct: 252 ALHVIGLSVTEVLVLPRILALMIALPILTFVADISALFGAGLITWAYLDIPPAAFLTQLQ 311 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S T+ G+IKAPFMA +G++A EG V S SLG+ T VV++I +VI++D Sbjct: 312 SAITVNTFVVGIIKAPFMALIVGLIACVEGLKVEGSSESLGRHTTMAVVKAIFLVIVVDG 371 Query: 363 LFAIFYFAIGI 373 +FA+F+ AIG+ Sbjct: 372 MFAMFFAAIGV 382 >gi|171322064|ref|ZP_02910936.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] gi|171092626|gb|EDT37930.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] Length = 427 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + Sbjct: 72 TVRLYGQWTALALARNRGAVARRVAGIATGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 131 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 +S +F I + + G + F Sbjct: 132 DG--VALSPTQRTIFERIERLDS-------QREAPERVVHFGPITRFGFMLFAFAEHLQG 182 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 183 GIAMFGLVILDALSVLRRPNTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 240 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 241 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 300 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 301 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 360 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 361 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 420 Query: 368 YFAIGI 373 + +G+ Sbjct: 421 FQNVGL 426 >gi|104779408|ref|YP_605906.1| ABC transporter permease [Pseudomonas entomophila L48] gi|95108395|emb|CAK13089.1| putative ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 374 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 118/366 (32%), Positives = 188/366 (51%), Gaps = 7/366 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 T AG+W + + + ++ D VDLS + +DT GA L+ + Sbjct: 15 TRLHIAGDWTLAHYASLKRECERLGSQY--GDDTQVDLSQLGRLDTAGASLLAELLGSER 72 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + L + P + L IG+ + + D+ Sbjct: 73 LSHCTDDLPDASRALL---KNVYCSVQDYCIPVKQPEQPVLLLLLARIGRAVDQLWQDTR 129 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +GL++ ++++ ++ + G+ P+V L++F+ GAV+A G Sbjct: 130 QVLGFIGLILETLLLRLFQPHRWRV--TPVVAHLEQTGLDAAPIVALLTFLVGAVVAFLG 187 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA IF++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT Sbjct: 188 ATVLAAFGATIFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRT 247 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ + +L+ PR+ AL+I+LPLLT LA ++G ++V DI A+F S S Sbjct: 248 LGLNPIELLVVPRVLALLIALPLLTFLAMLCGLVGGAVVCALTLDISPAMFLSLLQSDIG 307 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+ Sbjct: 308 VQHFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAAL 367 Query: 367 FYFAIG 372 F+ +G Sbjct: 368 FFMEMG 373 >gi|296284592|ref|ZP_06862590.1| putative ABC transport system permease protein [Citromicrobium bathyomarinum JL354] Length = 370 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 116/370 (31%), Positives = 191/370 (51%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G TV R G + I+ + + + D A ++EIDT+GA Sbjct: 13 DGGRTVLRLKGPYLLSTIANVDRGLRKLDDDIDVIDLA-----EVSEIDTVGAWFACTLA 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+ S ++L + + + + + +G+K+ + Sbjct: 68 RNHSASIE--NASERADRLLTAVGESANSSDVS-----APRLPLLTRAPEAMGEKVFEAG 120 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 S G +++ +F+ +++ Q VGV+ +P++ L+SF+ G VI Sbjct: 121 RGIVSVVGFFGQILAGAASLIRHPRRFRH--RAMVHQFESVGVNALPIIGLMSFLIGIVI 178 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGA QL FGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A+IG+MK+ EEID Sbjct: 179 AQQGAVQLQAFGAEALTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQIGTMKLTEEID 238 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ V +L+ PR+ A + + LL A+ AIIG ++V IPF F R H Sbjct: 239 AMRTIGISPVEVLVIPRLVACVFMMILLGFYASCMAIIGGAVVSDVMLGIPFWTFLMRIH 298 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +++ G+IKAP +G+ +G V +S +G + T VVQ+I VI++D+ Sbjct: 299 EVVPAHDVWVGMIKAPVFGLIVGMSGCYQGMQVRGNSEEVGLRTTKAVVQAIFTVIVLDA 358 Query: 363 LFAIFYFAIG 372 FA+F+ IG Sbjct: 359 FFAVFFTGIG 368 >gi|325273982|ref|ZP_08140141.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51] gi|324100871|gb|EGB98558.1| hypothetical protein G1E_12667 [Pseudomonas sp. TJI-51] Length = 374 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 7/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R AG+W + + D + A DLS + +DT GA L+ + Sbjct: 17 LRIAGDWTLAHYASLKRDSERLRAQYTPDTVA--DLSQLGRLDTAGASLLAELLGTERLS 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + L ++ P + N L IG + DS Sbjct: 75 RCTHDLPEASRALL---KNVYQSVQDYCIPVKEPERNVLLLLLERIGCAVGTLWQDSMQL 131 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G+++ ++++ ++ + G+ P+V L++F+ GAV+A GA Sbjct: 132 LGFIGVILETLLRRALQPHRWRI--TPVVAHIEQTGLDAAPIVALLTFLVGAVVAFLGAT 189 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA +F++DL++ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIRT+G Sbjct: 190 VLADFGATVFTVDLVAFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRTLG 249 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ + +L+ PR+ AL+I+LPLLT +A I+G ++V I A+F S S + Sbjct: 250 LNPMELLVVPRVLALLITLPLLTFVAMLCGIVGGAVVCALSLGISPAMFLSLLQSDIGVQ 309 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL KAPF A I + EGF V + S+G T+ VVQSI +VI++D++ A+F+ Sbjct: 310 HFLVGLAKAPFFAFLIAAIGCLEGFKVSGSAESVGAHTTSAVVQSIFVVIVLDAVAALFF 369 Query: 369 FAIG 372 +G Sbjct: 370 MEMG 373 >gi|299068161|emb|CBJ39380.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum CMR15] Length = 374 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ + + L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRTGLNTANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +L ++ ++ N +G ++ F Sbjct: 75 GNRWP--ELLDARPDQRRMIDRVARLD-------PGGWKKRIAPRINPVAVLGNAMLDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 EHLRIGVAMVGQLVFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I + A G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALAACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|332187454|ref|ZP_08389192.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17] gi|332012615|gb|EGI54682.1| hypothetical protein SUS17_2546 [Sphingomonas sp. S17] Length = 368 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 112/364 (30%), Positives = 186/364 (51%), Gaps = 14/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 RF GN + ++ + + +DLS + IDT+GA L+ F + Sbjct: 17 LRFTGNLSLATLGDLPERLDREEASVQ-----RIDLSQVDRIDTVGAWLVHRFAARNDAA 71 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 I+ G+ + L + + +P + F + +G ++ Sbjct: 72 IE--GLDENQRNLVDKVVEADQPVAMRPQP-----ISPFARVAGEVGDAVITAFKTLYGL 124 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +F+ +++ + VGVS + ++ L+SF+ G VIAQQGA Sbjct: 125 LGFMGATVIAGFAVLRHPRRFR--FNAVVHEFETVGVSALAIIGLMSFLIGIVIAQQGAV 182 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAE+F+I+L+ L LRE+GVL+TA+M+AGRSGSA A++G+MK+ EEIDA+R +G Sbjct: 183 QLRQFGAEVFTINLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEIDAMRVIG 242 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR A + +PLL ++ A+IG + IP F +R + Sbjct: 243 VSPMEALVLPRTIAAVTLMPLLGFYSSLIAMIGGCFLAAVSLGIPPVTFIARIREVVPIT 302 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +++ GLIKAP I I +G V + +G + T VVQ+I +VI++D+ FA+F+ Sbjct: 303 DLYVGLIKAPVFGAIIAIAGCFQGMQVKSDAEQVGLRTTAAVVQAIFLVIVLDAFFAVFF 362 Query: 369 FAIG 372 +G Sbjct: 363 TWLG 366 >gi|313682999|ref|YP_004060737.1| hypothetical protein Sulku_1877 [Sulfuricurvum kujiense DSM 16994] gi|313155859|gb|ADR34537.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM 16994] Length = 373 Score = 262 bits (671), Expect = 5e-68, Method: Composition-based stats. Identities = 109/371 (29%), Positives = 178/371 (47%), Gaps = 18/371 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + +G+W +S+ A ++ I S+ D+S ITEID+ G L Sbjct: 16 DAHMQILCSGSWTIEHLSDAARELEALIPLSL----VTWDMSGITEIDSSGIALWQLTNR 71 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 E+ + + +LF L+ KP R + + Y +GK+ + Sbjct: 72 TFEERGHTCETVNEREDLSRLFRLL---------YSKPFRDVPIPAVPSSLYRLGKETYE 122 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + LG + S+ + G +P++ L +F+ G Sbjct: 123 IFRGIGTFLAFLGEAFILFFYTLRHPRLIRY--RSIGVHILETGARALPIIALSAFLIGV 180 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q QL +FGA+IF +D++ I RE+ L+TA+++AGRSGSA A+IG+MK+ +E Sbjct: 181 VVAYQSVVQLQKFGADIFIVDMIGISLTRELAPLITAIVVAGRSGSAFTAQIGTMKMTQE 240 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RTMG D L+ PR+ AL+I +PLL A+ I G ++ + + F+ F R Sbjct: 241 IDAMRTMGFDPFTFLVWPRVIALMIIMPLLIFFADMVGIFGGMVIAQVHSHLSFSEFIHR 300 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + GLIK PF A I V+ GF V +++ S+G+ T VV +I +VI Sbjct: 301 LQGALALKHYLIGLIKGPFFAFLIAFVSTYRGFQVSMNTESIGQYTTKSVVNAIFLVIAC 360 Query: 361 DSLFAIFYFAI 371 D++F++ + Sbjct: 361 DAIFSVLLTEL 371 >gi|238759499|ref|ZP_04620662.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236] gi|238702274|gb|EEP94828.1| ABC transporter, permease protein [Yersinia aldovae ATCC 35236] Length = 381 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 116/364 (31%), Positives = 183/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G W + V + SA+ D S + +DT GA L+ + + Sbjct: 21 VYIRGEWVLAHYRFLEPKVAQL--RVDLPASAMFDFSQLGGLDTAGATLLATLLGELRVS 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + ++ L+ + + L IG+ + D S Sbjct: 79 NLRELAPRLPDERRVLLETVSQVLPNLVPQLTVKPQPFWIGLLVPIGQSVDNLWQDFKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFVGLTLEALLGTVFRPARWRV--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F + ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLTIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HLLVGISKAPIFAFLIAIIGCLEGFKVSGSAESVGMHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|254247077|ref|ZP_04940398.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184] gi|124871853|gb|EAY63569.1| hypothetical protein BCPG_01856 [Burkholderia cenocepacia PC184] Length = 425 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + Sbjct: 70 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 129 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R ++ L G I F Sbjct: 130 AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 180 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + + +Y G +P+ L++F+ G V++ A Sbjct: 181 GIAMFGRVILDALSVLRRPKTMP--WKEISANIYSAGAQALPITALVAFLIGIVLSYLSA 238 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 239 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 298 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 299 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 358 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418 Query: 368 YFAIGI 373 + +G+ Sbjct: 419 FQNVGL 424 >gi|17545032|ref|NP_518434.1| hypothetical protein RSc0313 [Ralstonia solanacearum GMI1000] gi|17427322|emb|CAD13841.1| putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein [Ralstonia solanacearum GMI1000] Length = 374 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ + + L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLNTANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +L ++ ++ N +G ++ F Sbjct: 75 GNRWP--ELLDARPDQRRMIDRVARLD-------PGGWKKRIAPRINPVTVLGNAMLDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 RHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALGGGILAARFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I + A G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALTACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|239813318|ref|YP_002942228.1| hypothetical protein Vapar_0299 [Variovorax paradoxus S110] gi|239799895|gb|ACS16962.1| protein of unknown function DUF140 [Variovorax paradoxus S110] Length = 388 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 96/372 (25%), Positives = 181/372 (48%), Gaps = 13/372 (3%) Query: 3 ENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++G + +G W + +S + + + +D DL I ++D IGA+L+ Sbjct: 25 QDGRSWTVASGRWTTLAMSSRSAWQALSKDLAGAPPADGRAWDLRPIEQLDHIGAQLLWD 84 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 +S + + ++ + P + F H G + ++ Sbjct: 85 HWRHRWPATLE--LSPQHKAVLDQVAQFTVGTPEEPPPTLAERLRHF----SHTGARGLE 138 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D ++G + + + + +G +Y G + + + L+ + G Sbjct: 139 VARD---FVGLIGQLALDACTLLRAPH--RGPWRDFSGHLYQFGATALHITALVGLLIGV 193 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A + QL Q+GAE F ++++ + +RE+G +L AV+IAGRSGSAI A+IG M++ EE Sbjct: 194 VLAYLISQQLRQYGAEAFVVNILGLSLIRELGPVLAAVLIAGRSGSAITAQIGVMRVTEE 253 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ L+ PR+ AL I++PL+++ + +A++G + DI A F S Sbjct: 254 LDAMRVMGIPHGFRLVMPRVMALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFLSA 313 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++N++ L K+ I ++ G V ++ SLG+ T+ VV SI+ VI++ Sbjct: 314 LPRAVPISNLWLALAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVILV 373 Query: 361 DSLFAIFYFAIG 372 D+LFA+ + +G Sbjct: 374 DALFAVLFKGVG 385 >gi|116051201|ref|YP_789968.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218890596|ref|YP_002439460.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254236173|ref|ZP_04929496.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719] gi|254241899|ref|ZP_04935221.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192] gi|115586422|gb|ABJ12437.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126168104|gb|EAZ53615.1| hypothetical protein PACG_02138 [Pseudomonas aeruginosa C3719] gi|126195277|gb|EAZ59340.1| hypothetical protein PA2G_02620 [Pseudomonas aeruginosa 2192] gi|218770819|emb|CAW26584.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 381 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 114/366 (31%), Positives = 185/366 (50%), Gaps = 4/366 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G+W + + +V +S + +A DLS + +DT GA L+ + Sbjct: 19 ARVRAIGDWTLAHYTALEREVTRL--RSEVAGNASFDLSQLGALDTAGAALLAELLGAER 76 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + +L+ +P++ + L IG + F Sbjct: 77 LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 136 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +GL + ++ L+ + G+ VP++ L++F+ GAVIA G Sbjct: 137 ALLGFIGLTLETLFRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 194 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR Sbjct: 195 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 254 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S Sbjct: 255 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIG 314 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+ Sbjct: 315 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 374 Query: 367 FYFAIG 372 F+ +G Sbjct: 375 FFMEMG 380 >gi|260752530|ref|YP_003225423.1| hypothetical protein Za10_0287 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856391|ref|YP_162753.2| hypothetical protein ZMO1018 [Zymomonas mobilis subsp. mobilis ZM4] gi|258551893|gb|ACV74839.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775390|gb|AAV89642.2| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ZM4] Length = 366 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 187/364 (51%), Gaps = 15/364 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G + +++ + SD ++DLS + +DT GA L+ + + + Sbjct: 16 LALQGVLTLAHLDSLSNTL------QTLSDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 +K G ++ + + IS R K + +GK V Sbjct: 70 VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G ++ + + + L ++I QM VGV+ + +V L+S + G VIAQQGA Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAEI+SI+L+ L RE+GVL+TA+M+AGRSGSA A+IGSM + EEIDA+R +G Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR A II +PLL A +A+IG ++ W DIP FF+R Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL+KAP I I +G V ++ LG T VV SI +VI++D+ FA+F+ Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360 Query: 369 FAIG 372 IG Sbjct: 361 SEIG 364 >gi|260463968|ref|ZP_05812164.1| protein of unknown function DUF140 [Mesorhizobium opportunistum WSM2075] gi|259030343|gb|EEW31623.1| protein of unknown function DUF140 [Mesorhizobium opportunistum WSM2075] Length = 395 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 149/369 (40%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G+ F+G W + ++ + D + I K + +DLS I +IDT GA LI + Sbjct: 28 EGGVLGCAFSGVWTTRTVA-LIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAWLIDRLV 86 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + K + E L+ + + + N +G+++ + Sbjct: 87 SVFEKKNVEVQLQGRSEIASILLDAVGEAVRREPESGPARPPNIVLRALEAVGRRVYEMR 146 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +D + +ILG I + ++ Q+ +GV +PVV+L+S + GA++ Sbjct: 147 DDFLASMNILGATIRGAQMKLGRGHAVNP--AAIFNQIDRMGVGAIPVVVLMSAIVGAIV 204 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGA+QLS FGA+IF +DL+ +L LRE+GVL+TA+MIAGRSGSAI AEIGSMK+ EE+D Sbjct: 205 AQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAIMIAGRSGSAITAEIGSMKMREEVD 264 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +GL+ + +L+ PR+ AL+I+LP LTI+ANF+A+ G W Y DIP A F R Sbjct: 265 ALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIAAAWLYSDIPPAAFLDRLR 324 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L+ IF GLIKAPFMA IG +A EG VG + SLG+ VT VV+SI +VII+D Sbjct: 325 VAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDG 384 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 385 LFAMFYAAI 393 >gi|83748501|ref|ZP_00945522.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207742154|ref|YP_002258546.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|83724805|gb|EAP71962.1| ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206593542|emb|CAQ60469.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] Length = 374 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 176/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ ++ N +G ++ F Sbjct: 75 GNRWP--EHLDARADQRRMIDRVARLD-------PGGWKKRIAPRINPVTVLGGAMIDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHLRIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|103485974|ref|YP_615535.1| hypothetical protein Sala_0481 [Sphingopyxis alaskensis RB2256] gi|98976051|gb|ABF52202.1| protein of unknown function DUF140 [Sphingopyxis alaskensis RB2256] Length = 368 Score = 262 bits (670), Expect = 6e-68, Method: Composition-based stats. Identities = 112/368 (30%), Positives = 191/368 (51%), Gaps = 15/368 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 RF G + ++ + A +DLSAI IDT+GA ++ Sbjct: 14 DGVEVRFTGRLTLARLGDLPARLDAL------GPIATLDLSAIDRIDTVGAWIVTRTAAD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + + G S ++L ++ K++ ++ + IG V N+ Sbjct: 68 HDAR--ITGASADAQRLLDALAS-----DKSEYRVHRDRRPAWVRMLEQIGTASVAVWNE 120 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G +I + + + +++ + VGV +P++ L+SF+ G VIAQ Sbjct: 121 LLGIVGFFGAMIVAIFNQIRARRRLR--WNAIVTRFQTVGVDALPIIGLMSFLIGIVIAQ 178 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QGA QL QFG E+F+I+L+ +RE+G+L+TA+M+AGRSGSA A+IG+MK+ EE+DA+ Sbjct: 179 QGAVQLEQFGLEVFTINLVGRASIRELGLLMTAIMVAGRSGSAFAAQIGTMKLTEEVDAM 238 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+G+ + ++ PR+ A I++PLL A+ AI G + W DIP + R Sbjct: 239 RTIGVSPMEAIVLPRVAASTITMPLLGFYASLCAIAGGGLFCWVGLDIPPLTYIQRLREI 298 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + + LIKAP IG+ EG V ++ +G++ T+ VV +I +VI++D+ F Sbjct: 299 IPMTDFWIMLIKAPVFGILIGVTGCYEGMQVRQNAEEVGQRTTSAVVAAIFLVIVLDAFF 358 Query: 365 AIFYFAIG 372 A+F+ ++G Sbjct: 359 AVFFSSLG 366 >gi|327478710|gb|AEA82020.1| ABC transporter permease [Pseudomonas stutzeri DSM 4166] Length = 385 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 111/363 (30%), Positives = 188/363 (51%), Gaps = 5/363 (1%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G+W + + +V ++ + + ++LS + +DT GA L++ + Sbjct: 27 RIVGDWTLAHYAALRREVQRL--RARIDERSQIELSGLGALDTAGAGLLVELLGPERIAA 84 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + +L+ + S F + HIG+ + + Sbjct: 85 IEAWAPQLPAERLALLRTVATA-LDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQRALL 143 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +GL + +++ L SL + G+ VP+V L++F+ GAV+A GA Sbjct: 144 GFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFLGATV 201 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+ FGA I++++L+ LRE GVLL A+++AGRS SA A+IGSMK NEE+DAIRT+GL Sbjct: 202 LADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEVDAIRTLGL 261 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + +L+ PR+ A++I+LP+LT + S I G +V DI +FF+ +++ Sbjct: 262 SPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDIAVSH 321 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GL KAP A I ++ EGF V + S+G+ T+ VVQ+I +VI++D++ A+F+ Sbjct: 322 FLVGLGKAPVFAFVIAVIGCLEGFKVSGSAQSVGEHTTSSVVQAIFMVILLDAIAALFFM 381 Query: 370 AIG 372 +G Sbjct: 382 EMG 384 >gi|241761770|ref|ZP_04759856.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373684|gb|EER63244.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 366 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 123/364 (33%), Positives = 188/364 (51%), Gaps = 15/364 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G + +++ + M SD ++DLS + +DT GA L+ + + + Sbjct: 16 LALQGVLTLAHLDSLSNTLQML------SDVKVIDLSNLHRMDTAGAWLVHKLAQDNNAE 69 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 +K G ++ + + IS R K + +GK V Sbjct: 70 VK--GTNSAVAHILDQISHYDRPLPPEPKA-----VSPLIYTLTGVGKNTVHVWYTIVGL 122 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G ++ + + + L ++I QM VGV+ + +V L+S + G VIAQQGA Sbjct: 123 VNFFGALLVSIWHTICHPSRLR--LTAIICQMETVGVNALAIVGLMSILVGVVIAQQGAV 180 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL QFGAEI+SI+L+ L RE+GVL+TA+M+AGRSGSA A+IGSM + EEIDA+R +G Sbjct: 181 QLRQFGAEIYSINLVGRLSFRELGVLMTAIMVAGRSGSAFAAQIGSMNLAEEIDAMRIIG 240 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR A II +PLL A +A+IG ++ W DIP FF+R Sbjct: 241 VSPMESLVLPRFLASIIMMPLLGFYATIAAVIGGGLLCWTVLDIPPTTFFTRLREVIPYT 300 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL+KAP I I +G V ++ LG T VV SI +VI++D+ FA+F+ Sbjct: 301 DVAVGLVKAPIFGALIAIAGCFQGTQVKGNAEQLGYCTTKAVVHSIFLVIVLDAFFAVFF 360 Query: 369 FAIG 372 IG Sbjct: 361 SEIG 364 >gi|152984282|ref|YP_001347296.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959440|gb|ABR81465.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 381 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 114/366 (31%), Positives = 184/366 (50%), Gaps = 4/366 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G+W + + +V +S + A DLS + +DT GA L+ + Sbjct: 19 ARVRAIGDWTLAHYTALEREVTRL--RSQVAGDASFDLSQLGALDTAGAALLAELLGAER 76 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + +L+ +P++ + L IG + F Sbjct: 77 LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 136 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +GL + ++ L+ + G+ VP++ L++F+ GAVIA G Sbjct: 137 ALLGFIGLTLETLLRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 194 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR Sbjct: 195 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 254 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S Sbjct: 255 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWSLDIPPAMFLSIMEDGIG 314 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+ Sbjct: 315 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 374 Query: 367 FYFAIG 372 F+ +G Sbjct: 375 FFMEMG 380 >gi|294010007|ref|YP_003543467.1| ABC-type transport system permease component LinK [Sphingobium japonicum UT26S] gi|292673337|dbj|BAI94855.1| ABC-type transport system permease component LinK [Sphingobium japonicum UT26S] Length = 376 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 114/370 (30%), Positives = 193/370 (52%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G TV R +GN + ++ D + I+ +DLS + +DTIGA ++ + Sbjct: 19 REGRTVIRLSGNLSIACLHDLPDRLDA-----IEGPVDTIDLSDVGHMDTIGAWVLHRAI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ + G E+L + + R ++ + IG+ +V Sbjct: 74 KRLDCG--ITGDKCDAERLIATVGSVDE-----PVNIRPDHEPPWQRVVGQIGEAVVNSG 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + T +F+ +++++ VGVS + ++ L+SF+ G VI Sbjct: 127 TTLLGLLGFFGGTLVATWNVIRHPGRFRIN--AVVQRFEVVGVSALGIIGLMSFLIGIVI 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EE+D Sbjct: 185 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PR A+++ +PLL ++ AIIG + DIP F R Sbjct: 245 AMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVSLDIPPITFVQRLR 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI+ID+ Sbjct: 305 EVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 364 Query: 363 LFAIFYFAIG 372 FA+F+ +G Sbjct: 365 FFAVFFTWVG 374 >gi|29654061|ref|NP_819753.1| ABC transporter permease [Coxiella burnetii RSA 493] gi|161830426|ref|YP_001596961.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165924016|ref|ZP_02219848.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212212807|ref|YP_002303743.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] gi|29541327|gb|AAO90267.1| ABC transporter permease protein [Coxiella burnetii RSA 493] gi|161762293|gb|ABX77935.1| ABC transporter, permease protein [Coxiella burnetii RSA 331] gi|165916539|gb|EDR35143.1| ABC transporter, permease protein [Coxiella burnetii RSA 334] gi|212011217|gb|ACJ18598.1| ABC transporter permease protein [Coxiella burnetii CbuG_Q212] Length = 377 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 114/368 (30%), Positives = 189/368 (51%), Gaps = 13/368 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKY 65 G+W +S + D + + K S+ I+ IT++D+ GA L ++ ++ Sbjct: 20 LFCLGDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKITKMDSAGALLFYTLINHLKSL 77 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 I++ G+S + + L LI + + ++ + Y +G+ V Sbjct: 78 GKAIEITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVL 131 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G V + G+ + +++R + G +P+V L+SF+ G V+ Q Sbjct: 132 IDFLTFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQ 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+ + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F+ Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369 Query: 366 IFYFAIGI 373 + + GI Sbjct: 370 VIFSLRGI 377 >gi|116690919|ref|YP_836542.1| hypothetical protein Bcen2424_2901 [Burkholderia cenocepacia HI2424] gi|116649008|gb|ABK09649.1| protein of unknown function DUF140 [Burkholderia cenocepacia HI2424] Length = 447 Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + Sbjct: 92 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 151 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R ++ L G I F Sbjct: 152 AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 380 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 381 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 440 Query: 368 YFAIGI 373 + +G+ Sbjct: 441 FQNVGL 446 >gi|154706662|ref|YP_001424136.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] gi|154355948|gb|ABS77410.1| ABC transporter permease protein [Coxiella burnetii Dugway 5J108-111] Length = 377 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 13/368 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKY 65 G+W +S + D + + S+ I+ IT++D+ GA L ++ ++ Sbjct: 20 LFCLGDWTVSHLSPLEDQLP--LCAEKLSEKVIIHADKITKMDSAGALLFYTLINHLKSL 77 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 I++ G+S + + L LI + + ++ + Y +G+ V Sbjct: 78 GKAIEITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVL 131 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G V + G+ + +++R + G +P+V L+SF+ G V+ Q Sbjct: 132 IDFLTFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQ 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+ + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F+ Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369 Query: 366 IFYFAIGI 373 + + GI Sbjct: 370 VIFSLRGI 377 >gi|300692713|ref|YP_003753708.1| abc-type transport system, permease abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum PSI07] gi|299079773|emb|CBJ52450.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum PSI07] Length = 374 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ +++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLNNANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ ++ N +G + F Sbjct: 75 GNRWP--ERLDARPDQRRMIDRVARLD-------PGGWKKRIAPRINPVMVLGGAMFDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 GHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|146277759|ref|YP_001167918.1| hypothetical protein Rsph17025_1720 [Rhodobacter sphaeroides ATCC 17025] gi|145556000|gb|ABP70613.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17025] Length = 366 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 195/364 (53%), Gaps = 9/364 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 + +G ++ ++ A +D+ A+ +DT GA I+ ++ Sbjct: 12 QISGRLTIETLARTRHNLASA------EREGRLDMGAVEALDTAGAWAILSAQKRAEAGG 65 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + + E L++ + +P+R + +G+++ + S Sbjct: 66 RPFEIVNLSEAHRHLLATVADA-MPEPEPRRRTIPGRPGDGLAQLGQEVAGGLRGSLDSM 124 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 G V+++ G + + L L+ M G + VP+V L+ F+ G V+A QG+ Q Sbjct: 125 AFFGQVVAHLGGLLIHPRRLR--LTPLVHHMQEAGWNAVPIVTLMGFLIGIVLAFQGSTQ 182 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L FGAE++ +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EEIDA+R +GL Sbjct: 183 LKAFGAEVYVVDLVAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAMRVLGL 242 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + L+ PR+ AL+I LP+L +A+ + ++G +++ W I +F ++ + + + Sbjct: 243 DPIDRLVLPRLIALVILLPVLGFIASMAGLVGGALMAWIDLGITPGMFRTQLLADTDVNH 302 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF++F+ Sbjct: 303 AIIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSVFFA 362 Query: 370 AIGI 373 G+ Sbjct: 363 VWGL 366 >gi|182681137|ref|YP_001829297.1| hypothetical protein XfasM23_0579 [Xylella fastidiosa M23] gi|182631247|gb|ACB92023.1| protein of unknown function DUF140 [Xylella fastidiosa M23] gi|307579585|gb|ADN63554.1| ABC transporter permease [Xylella fastidiosa subsp. fastidiosa GB514] Length = 396 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 118/368 (32%), Positives = 188/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 +G+W + + +S + ++ I ++D+ GA ++ F + Sbjct: 41 DRGQIHLSGSWVLANLL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFTTR 95 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L S I + K + F +G +VK + Sbjct: 96 TGLKNEAIEFREEHRPLISTIEILDDEHPKPE------RDYGFLAALERLGIAVVKTRRN 149 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + + +F+ S + M VG+ VP+V+++S++ GAVIA Sbjct: 150 IIDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 207 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI Sbjct: 208 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 267 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +T+GLD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T Sbjct: 268 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 327 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L Sbjct: 328 MQLRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 387 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 388 ALWFMRMG 395 >gi|94496554|ref|ZP_01303130.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58] gi|94423914|gb|EAT08939.1| hypothetical protein SKA58_17657 [Sphingomonas sp. SKA58] Length = 369 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G TV R +GN + ++ + +Q VD+S + IDTIGA + Sbjct: 12 RDGGTVIRLSGNLAIACLHDLPARLDA-----VQGPINAVDVSQVDHIDTIGAWTVHSAA 66 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ + + G + ++L + + + IG ++ Sbjct: 67 KRLNAP--ITGANEDAQRLIEAVGTLDEPFSLRP-----DKVSPLTRVVGQIGDAVISAG 119 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + +F+ +++++ VGVS + ++ L+SF+ G VI Sbjct: 120 TTLMGLLGFFGASLVAAWGLIRHPSRFRVN--AVVQRFEVVGVSALGIIGLMSFLIGIVI 177 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA A++G+MK+ EEID Sbjct: 178 AQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEID 237 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+G+ + L+ PR A+++ +PLL A+ A+IG + DIP F R Sbjct: 238 AMRTIGVSPMEALVMPRTLAVVVMMPLLGFYASIVAVIGGGFLCAVALDIPPITFVQRLR 297 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GLIKAP I + +G V ++ +G + T VVQ+I +VI+ID+ Sbjct: 298 EVVPITDLWVGLIKAPVFGIIIALSGCYQGMQVKANAEEVGLRTTAAVVQAIFLVIVIDA 357 Query: 363 LFAIFYFAIG 372 FA+F+ +G Sbjct: 358 FFAVFFTWVG 367 >gi|71274907|ref|ZP_00651195.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71898795|ref|ZP_00680963.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71901849|ref|ZP_00683912.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|170729829|ref|YP_001775262.1| ABC transporter permease [Xylella fastidiosa M12] gi|71164639|gb|EAO14353.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71728377|gb|EAO30545.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71731381|gb|EAO33444.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|167964622|gb|ACA11632.1| ABC transporter permease [Xylella fastidiosa M12] Length = 372 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 117/368 (31%), Positives = 187/368 (50%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 +G+W + + +S + ++ I ++D+ GA ++ F + Sbjct: 17 DRGQIHLSGSWVLANVL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFATR 71 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L S I + K + F +G +VK + Sbjct: 72 TGLKNEAIEFREEHRPLISTIEILDDEHPKPE------RDYGFLAALERLGIAVVKTRRN 125 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + + +F+ S + M VG+ VP+V+++S++ GAVIA Sbjct: 126 IIDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 183 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI Sbjct: 184 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 243 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +T+GLD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T Sbjct: 244 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 303 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L Sbjct: 304 MQFRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 363 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 364 ALWFMRMG 371 >gi|149187032|ref|ZP_01865339.1| ABC-type transport system permease component [Erythrobacter sp. SD-21] gi|148829321|gb|EDL47765.1| ABC-type transport system permease component [Erythrobacter sp. SD-21] Length = 369 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 118/369 (31%), Positives = 205/369 (55%), Gaps = 14/369 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G +V +G + + + +D+ + + A +DLS ++EIDT+GA L Sbjct: 13 EGGSVLALSGPYLVSTVGAVDEDL-----RGLDEPLARIDLSEVSEIDTVGAWLACQLAS 67 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ ++ G S +L ++ + +++ + + + +G+K+ + Sbjct: 68 RHGA--EITGASERATRLLGALT-----GMDSEQALSAPRLPVWSRVPEAMGEKMFNARS 120 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + LG + + G + +F+ +L+ Q+ VGVS +P++ L+SF+ G VIA Sbjct: 121 GAIGVISFLGAALISAGNLIRNPRRFRTV--ALVHQVELVGVSALPIIGLMSFLIGIVIA 178 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQGA QL+ FGAE +++L+ + LRE+GVL+TA+M+AGRSGSA A++G+MK+ EE+DA Sbjct: 179 QQGAVQLAAFGAETLTVNLVGRITLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVDA 238 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+G+ + L+ PRI + ++ +PLL A+ AIIG ++V IPF F SR Sbjct: 239 MRTIGISPMEALVIPRILSAVLMMPLLGFYASCMAIIGGAVVGDLMLGIPFWTFLSRIQE 298 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++ GLIKAP +G+ G V +S +GK+ T VV +I VI++D+ Sbjct: 299 VVPTYDVWVGLIKAPVFGLIVGLAGCYNGMQVEGNSEEVGKRTTLSVVAAIFAVIVLDAF 358 Query: 364 FAIFYFAIG 372 FA+F+ +G Sbjct: 359 FAVFFTELG 367 >gi|300705335|ref|YP_003746938.1| ABC transporter permease [Ralstonia solanacearum CFBP2957] gi|299072999|emb|CBJ44356.1| putative abc-type transport system, permease component abc transporter protein (resistance to organic solvents) [Ralstonia solanacearum CFBP2957] Length = 374 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 176/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRGARRQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ ++ N +G ++ F Sbjct: 75 GNRWP--EHLDARADQRRMIDRVARLD-------PGGWKKHIAPRINPVTVLGGAMLDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 DHLQIGVAMVGQLMFDLLRFVRAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI+IVI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITIVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|15837904|ref|NP_298592.1| hypothetical protein XF1303 [Xylella fastidiosa 9a5c] gi|9106294|gb|AAF84112.1|AE003963_9 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 396 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 118/368 (32%), Positives = 187/368 (50%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 +G+W + + +S + ++ I ++D+ GA ++ F + Sbjct: 41 DRGQIHLSGSWVLANVL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFATR 95 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K G L S I + K + F +G +VK + Sbjct: 96 TGLKNDAIGFREEHRPLISTIEILDDEYPKPE------RDYGFLAALERLGIAVVKTRRN 149 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + + +F+ S + M VG+ VP+V+++S++ GAVIA Sbjct: 150 IVDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 207 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI Sbjct: 208 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 267 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +T+GLD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T Sbjct: 268 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 327 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L Sbjct: 328 MQFRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 387 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 388 ALWFMRMG 395 >gi|300312192|ref|YP_003776284.1| organic solvents resistance ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074977|gb|ADJ64376.1| ABC-type transport system involved in resistance to organic solvents, permease component protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 108/365 (29%), Positives = 193/365 (52%), Gaps = 4/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G+W ++ + A + + +++ SA++ DT+GA+L++ + Sbjct: 19 VLHVEGDWTLRNYRALSRQIAQA--RPALGEQTVLEFSALSAFDTVGAKLLVDLLGVPAA 76 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + Q ST +L++ K ++ +G + + Sbjct: 77 LRQTQADSTLAPAWRALLAVVAEAKAIAMPKPAPPRQAWITDMLERVGAATLSLRACALG 136 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +GL + +++ +++ Q+ G+ VP+V L++F+ GAV+A GA Sbjct: 137 LLGFMGLCLQTLLSSFWRPSRWRV--TAVVAQIEQTGLDAVPIVSLLTFMVGAVVAFLGA 194 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ FGA I+++DL++ LRE VLLTA+++AGR+ S+ A+IGSMK NEEIDAIR + Sbjct: 195 TVLANFGASIYTVDLVAFSFLREFAVLLTAILMAGRTASSFTAQIGSMKANEEIDAIRAL 254 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD +++L+ PR+ AL++++P LT +A S + G ++V DI +F S + Sbjct: 255 GLDPIKLLVLPRLIALLVAMPALTFIAMLSGLFGGAMVCALSLDISPTMFLSLLQQDVGI 314 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G++KAP A + ++ EGF V + S+G+ T+ VVQSI +VI++D+L A+F Sbjct: 315 RHFILGMVKAPLFAFVVAVIGCNEGFKVSGSAQSVGQHTTSSVVQSIFVVILLDALAALF 374 Query: 368 YFAIG 372 + +G Sbjct: 375 FMEMG 379 >gi|28198464|ref|NP_778778.1| ABC transporter permease [Xylella fastidiosa Temecula1] gi|28056548|gb|AAO28427.1| ABC transporter permease [Xylella fastidiosa Temecula1] Length = 372 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 118/368 (32%), Positives = 188/368 (51%), Gaps = 13/368 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 +G+W + + +S + ++ I ++D+ GA ++ F + Sbjct: 17 DRGQIHLSGSWVLANLL-----TASELLQSYSNSIQHINARNIDQLDSAGALQLLRFTTR 71 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + L S I + K + F +G +VK + Sbjct: 72 TGLKNEAIEFREEHRPLISTIEILDDEHPKPE------RDYGFLAALERLGIAVVKTRRN 125 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + + +F+ S + M VG+ VP+V+++S++ GAVIA Sbjct: 126 IIDVCSFLGENLVKIAQLAREPRRFRI--TSTVHHMEQVGLDAVPLVVVLSYLVGAVIAF 183 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G+ L FGAEIF ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI Sbjct: 184 LGSTILRNFGAEIFVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEIDAI 243 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +T+GLD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ SR H T Sbjct: 244 QTLGLDPIDLLVIPRLIALLVMLPLLTFIAMIAGLAGGITVGAFDLGIPPQMYLSRMHET 303 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + G+ KAP A IG++ EG V + S+GK T+ VVQ+IS+VIIID+L Sbjct: 304 MQLRHFIIGMSKAPLFALIIGLIGCLEGLKVTGTAQSVGKHTTSSVVQTISLVIIIDALA 363 Query: 365 AIFYFAIG 372 A+++ +G Sbjct: 364 ALWFMRMG 371 >gi|301062341|ref|ZP_07203004.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300443545|gb|EFK07647.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 390 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 175/373 (46%), Gaps = 6/373 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SE +F G+W ++ ++ D ++ D+ + Sbjct: 24 LSEQKTLQIKFQGDWILENKRPSISALIKQMDSEAAVRQITFDTLGLSRWDSALLICLTK 83 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 +EK K E F L+ + + N + + +G + V Sbjct: 84 IIEKASQKDIPLDGKGLPEGAFKLLDLASTV----PEKKGVHKKNGRPSFLFQVGSESVA 139 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F N +G + +F +F+ L+R + G+ +P+V LIS + G Sbjct: 140 FFNSFLEALGFVGEAFNAFSKFLTGKARFRR--SDLMRIIQDCGIEALPIVSLISLLVGL 197 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA QL+ FGA+I+ +L+ I +R +G ++ +++AGR+G+A A++G+M++NEE Sbjct: 198 ILAFVGAVQLTMFGAQIYVANLVGIAMVRVMGAVMAGIIMAGRTGAAFAAQLGTMQVNEE 257 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA +TMG+ + L+ PR+ AL + +PLL + A+ I+G IV D+ ++++ Sbjct: 258 IDAFKTMGISPMEFLVLPRMLALTLMMPLLCLYADLMGILGGFIVGVGMLDLNMMEYYNQ 317 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + TL++++ G++++ + + G G ++++G T+ VV I +I+ Sbjct: 318 TKAAVTLSDLWIGIVQSAVFGMLVALAGCLRGMQCGRSASAVGDATTSAVVTGIVSIIVA 377 Query: 361 DSLFAIFYFAIGI 373 ++ + +GI Sbjct: 378 TAVITVITNMMGI 390 >gi|120554124|ref|YP_958475.1| hypothetical protein Maqu_1197 [Marinobacter aquaeolei VT8] gi|120323973|gb|ABM18288.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8] Length = 382 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 113/373 (30%), Positives = 190/373 (50%), Gaps = 12/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G +F+G+W S + ++ + D S + +DT GA L++ Sbjct: 19 AEFGGHTLKFSGDWTLSHYSVLNRQTTAL---KPRAAACNPDFSGLGRLDTAGASLMVKL 75 Query: 62 ME--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + ++ + L ++ NQ N IGKK+ Sbjct: 76 LGSDALISALQRAELPDEQRALIQAVAEAM-----NQPSAAVATVNPVVAFLAEIGKKVT 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 A +G + +++ + ++ G++ +P+V L++F+ G Sbjct: 131 TLGQLVWLLAGFIGQTLGTLFYILPRPTRWRI--TPFVAALHDTGLNALPIVALLTFLVG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A GA L FGA I+++DL++ LRE GVLL A+++AGR+ SA A+IG+MK+NE Sbjct: 189 AVVAFLGATVLEDFGATIYTVDLVAFSFLREFGVLLAAILLAGRTASAFTAQIGAMKVNE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAIRT+GL+ V +L+ PR+ A++ SLP+LT + S ++G ++V DIP + F + Sbjct: 249 ELDAIRTLGLNPVELLVVPRVLAMMFSLPILTFIGMISGMVGGAVVCAVALDIPPSQFIA 308 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L + GL KAP A I ++ EGF V + S+G+ T+ VVQSI +VI+ Sbjct: 309 IVERDIALKHFLVGLGKAPVFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVIL 368 Query: 360 IDSLFAIFYFAIG 372 +DS+ A+F+ +G Sbjct: 369 LDSVAALFFMEMG 381 >gi|152980330|ref|YP_001354931.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280407|gb|ABR88817.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 374 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 13/371 (3%) Query: 4 NGITVFRFAGNWKSPEI--SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N AG+W+ + D + + + D DLS I +D IGA+L+ Sbjct: 14 NDQATVIAAGSWQVRALIDPGAMDKLTATLRGVRKVDETRWDLSGIEALDYIGAQLLWNA 73 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 K ++ E F + T ++K R + ++++ ++ Sbjct: 74 WGKKRPPQLT--LAPQHESFFQRLEQTGTLQVKRPPQHRWYTFSAYLQFK-------LRM 124 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + ++G ++ + G F +G + +++ G + + L+ F+ G V Sbjct: 125 ADHMLGFITLIGQLVMDMGRFIRQPQ--RGPWKEISANIFHTGYQALGITALVGFLIGVV 182 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL QFG +IF ++++ + +RE+G LL A+++AGRSGS+I A++G M++ EE+ Sbjct: 183 LSYLSAQQLHQFGGDIFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEEL 242 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MGL LI P++ AL IS+PLL + + A+IG + F F Sbjct: 243 DAMLVMGLPHGYRLIMPKVIALAISMPLLVVWTDAMALIGGMAAANVELGLSFKYFLREL 302 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 LAN + GL K I +VA G + ++ SLG+ T VV +I++VI+ D Sbjct: 303 PDAVPLANYWIGLGKGVVFGSLIALVACHFGLRIKPNTESLGEGTTISVVTAITVVILAD 362 Query: 362 SLFAIFYFAIG 372 ++FAI + +G Sbjct: 363 AVFAIVFSGVG 373 >gi|254470335|ref|ZP_05083739.1| ABC transporter permease protein [Pseudovibrio sp. JE062] gi|211960646|gb|EEA95842.1| ABC transporter permease protein [Pseudovibrio sp. JE062] Length = 382 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 136/372 (36%), Positives = 209/372 (56%), Gaps = 6/372 (1%) Query: 2 SENGITVF-RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +E+G + +G W + ++++ + S+ VDL A++ +DT GA L+ Sbjct: 15 AEDGALLLLTASGAWGIRQ-GATCENLINQVAASLTHSVICVDLKAVSFLDTAGAWLLQR 73 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 F + + + E+ L+ R+++ N + S NSF N +G+ + Sbjct: 74 FQMEQAEQGREVKFLYEDERFDILLKEVDRQEVDNPTEEHSG--NSFLNYLEAVGEATRQ 131 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D+ +LG + + + + S+ Q + VP+V L+SF+ G Sbjct: 132 LGRDTRDILAMLGSLTATITAAATHPSRLRPI--SIGVQFQRSCMGAVPIVCLMSFLIGG 189 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +IAQQG F L QFGAEIF +DL IL LREIGV+LTA+M+AGRSGSA AE+GSMK+ EE Sbjct: 190 IIAQQGGFYLKQFGAEIFVVDLSGILVLREIGVILTAIMVAGRSGSAYTAELGSMKMQEE 249 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++ GL +LI PR+ AL+I+LP+L LAN +A+ GA + W Y I F ++ Sbjct: 250 IDALQVTGLRVTEVLILPRLVALMIALPILVFLANIAALFGAGLTCWWYLGIVPHSFIAQ 309 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + T+ + G++KAPFMA IG++A EG V S SLG+ T VV+SI +VI++ Sbjct: 310 LQAAVTVDTLMVGIVKAPFMALIIGLIACMEGMKVEGSSESLGRHTTVSVVKSIFMVIVV 369 Query: 361 DSLFAIFYFAIG 372 D +FA+F+ +IG Sbjct: 370 DGVFAVFFASIG 381 >gi|153209306|ref|ZP_01947341.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212219048|ref|YP_002305835.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] gi|120575422|gb|EAX32046.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat Q177'] gi|212013310|gb|ACJ20690.1| ABC transporter permease protein [Coxiella burnetii CbuK_Q154] Length = 377 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 13/368 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IMYFMEKY 65 G+W +S + D + + K S+ I+ I ++D+ GA L ++ ++ Sbjct: 20 LFCLGDWTVSHLSPLEDQLPLYAEKL--SEKVIIHADKIIKMDSAGALLFYTLINHLKSL 77 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 I++ G+S + + L LI + + ++ + Y +G+ V Sbjct: 78 GKAIEITGLSENAQSLLKLIGNESKFLRQPLPSSKTP------GVVYLLGEWAVTKWRVL 131 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G V + G+ + +++R + G +P+V L+SF+ G V+ Q Sbjct: 132 IDFLTFVGEVATTAGQGILKPQ--RIQWRAILRAIEETGYQALPIVALLSFLVGVVLTYQ 189 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL + A+IF +D+ LRE G L+TA++ AGR+ +A A+IG+MK+NEEIDA+ Sbjct: 190 IALQLDSYNADIFVVDITGAAILREFGPLITAIIAAGRTSTAFTAQIGTMKVNEEIDALN 249 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG+ + L+ P+I ALIISL LLT+ A+ G+ I+ DI + F RFH Sbjct: 250 TMGVVPIEHLVLPKIIALIISLTLLTVWADIFGTFGSMIMAKSQLDIGYLAFLDRFHHAI 309 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GLIKAP I V +GF VG ++S+G+K T VQSI ++II D++F+ Sbjct: 310 AVRHYIAGLIKAPVFGLIIATVGCFQGFQVGASADSVGQKTTQSAVQSIFLIIIADAIFS 369 Query: 366 IFYFAIGI 373 + + GI Sbjct: 370 VIFSLRGI 377 >gi|84516868|ref|ZP_01004226.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] gi|84509336|gb|EAQ05795.1| ABC transporter, inner membrane subunit [Loktanella vestfoldensis SKA53] Length = 380 Score = 259 bits (663), Expect = 4e-67, Method: Composition-based stats. Identities = 123/373 (32%), Positives = 198/373 (53%), Gaps = 13/373 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + DV+ + +VD++ ++ +DT GA ++ Sbjct: 19 DSDGARLSVQGRLTIDSFEHLDRDVIAQQASRAE----VVDIAQLSHMDTAGAWFLLDLA 74 Query: 63 EK--YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + + G S L + K KP + +G+++ Sbjct: 75 GRTSAGAASVITGASDAQTLLIEAVRTNLPPKAAGAKPAV-----RLVDHFETLGRRVAL 129 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + LG VI+ + L S++ VG+ VP+V L++F+ G Sbjct: 130 AGSHALEMLSFLGQVIAAMARVIRHPRALR--LTSVVHHCQQVGLQAVPIVALMAFLIGV 187 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG+ QL QFGAE+F +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EE Sbjct: 188 VLAFQGSAQLRQFGAEVFVVDLIAISILRELGILLTAIIVAGRSGSAFTAAIGSMKMREE 247 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RT+GLD V IL+ PR+ AL++ LP L ++AN S + G +++ W D+ AVF +R Sbjct: 248 IDAMRTLGLDPVAILVVPRVLALVLMLPALGLIANVSGLFGGALMSWIELDVSPAVFQAR 307 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S + + G+IKAP A IGI+ +G VG + SLG++ + VV +I +VI+ Sbjct: 308 LVSNTDVWHFNVGMIKAPVFALIIGIIGCYQGMKVGGDAESLGRQTSASVVMAIFMVIVA 367 Query: 361 DSLFAIFYFAIGI 373 D+LF+IF+ +G+ Sbjct: 368 DALFSIFFAIVGV 380 >gi|222823161|ref|YP_002574734.1| ABC transporter permease (DUF140 domain protein) [Campylobacter lari RM2100] gi|222538382|gb|ACM63483.1| putative ABC transporter, permease protein (DUF140 domain protein) [Campylobacter lari RM2100] Length = 370 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 16/369 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFME 63 +F G W + ++ + I D + + IDT G + ++ Sbjct: 14 CIFSVFGIWDKTSVGKLEK------LDFPTQKNIIFDFTNLDFIDTAGIRYFLALENELK 67 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + ++ + + +LF L ++ + + + + K+ ++GKK+V+ Sbjct: 68 QKGFELSRVNLKSEHAKLFELCQKHYKSFCDSYEDK-----KTIKDFFENLGKKVVESFT 122 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +GL+I+ K + + + + ++ +P+++L S + G V+A Sbjct: 123 LLVQFLNFIGLIIATCFNTLFHLKKLR--FRAFLYHVENSAINALPIIMLTSLLVGVVLA 180 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A+QL+QFGA I+ +DLM I RE+ L++A++IAGRS S+ A+IG MK+ +EIDA Sbjct: 181 YQAAYQLAQFGANIYIVDLMGISATRELAPLISAIVIAGRSASSYTAQIGVMKLTDEIDA 240 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TMG +I PR+ AL +++PL+ I+A+ +IIG IV W +I + F SRF Sbjct: 241 MKTMGFKESEFIILPRVLALALAMPLVVIVADILSIIGGIIVAWFSLEISASEFMSRFKE 300 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L +I GLIKAP I +A GF V + S+G T VV +I VI D++ Sbjct: 301 AVELKHIIIGLIKAPIFGFLIASIACFRGFFVQKTTESIGVYTTKSVVNAIFWVIAFDAI 360 Query: 364 FAIFYFAIG 372 F++F G Sbjct: 361 FSVFLTKAG 369 >gi|159044594|ref|YP_001533388.1| hypothetical protein Dshi_2050 [Dinoroseobacter shibae DFL 12] gi|157912354|gb|ABV93787.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 384 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 126/374 (33%), Positives = 209/374 (55%), Gaps = 15/374 (4%) Query: 1 MSENGITVF-RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S++ V +G+ ++++ + + S +DLS I IDT GA L+ Sbjct: 25 LSQDEAGVAGALSGDLTIYGVADLQRQLAAR-----PAGSLTLDLSGIGRIDTAGAWLLA 79 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++L G + +L + + K + + P+R+ + + +G+++V Sbjct: 80 ELAR--GEGVRLVGAPDKVARLIANV-----AKAEPEHPERTETPPTLTDRLERLGRQVV 132 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +LGLV++ G +F+ +L+ VG+ VP+V L++F+ G Sbjct: 133 EGTKFLGGLTGMLGLVLARFGRALRHPREFRM--TALVHHCEEVGLRAVPIVALMAFLIG 190 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QGA QL QFGAE+F +DL+SI LRE+G+LLTA+++AGR+ S+ A IGSMK+ E Sbjct: 191 IVLAFQGASQLRQFGAEVFVVDLISISILRELGILLTAIIVAGRTASSFTAAIGSMKMRE 250 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+RT+GLD +L PR+ AL+I LP+L ++AN S ++G +++ W I A+F + Sbjct: 251 EIDAMRTLGLDPAMLLFLPRVLALLIMLPILGLIANLSGLLGGALMSWIELGISPAMFQT 310 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + + GL+KAPF A IG+V G V ++ SLG+ + VV +I VI+ Sbjct: 311 RLIEGTDINHAVVGLVKAPFFAILIGVVGCHAGMQVEGNAESLGRMTSGAVVTAIFAVIV 370 Query: 360 IDSLFAIFYFAIGI 373 D+ F+IF+ +GI Sbjct: 371 TDAAFSIFFAQMGI 384 >gi|107102741|ref|ZP_01366659.1| hypothetical protein PaerPA_01003808 [Pseudomonas aeruginosa PACS2] Length = 372 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 114/366 (31%), Positives = 185/366 (50%), Gaps = 4/366 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G+W + + +V +S + +A DLS + +DT GA L+ + Sbjct: 10 ARVRAIGDWTLAHYTALEREVTRL--RSEVAANASFDLSQLGALDTAGAALLAELLGAER 67 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + +L+ +P++ + L IG + F Sbjct: 68 LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 127 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +GL + ++ L+ + G+ VP++ L++F+ GAVIA G Sbjct: 128 ALLGFIGLTLETLFRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 185 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR Sbjct: 186 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 245 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S Sbjct: 246 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIG 305 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+ Sbjct: 306 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 365 Query: 367 FYFAIG 372 F+ +G Sbjct: 366 FFMEMG 371 >gi|170748370|ref|YP_001754630.1| hypothetical protein Mrad2831_1952 [Methylobacterium radiotolerans JCM 2831] gi|170654892|gb|ACB23947.1| protein of unknown function DUF140 [Methylobacterium radiotolerans JCM 2831] Length = 384 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 134/371 (36%), Positives = 210/371 (56%), Gaps = 8/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G G W + + + + I + ++ VDLS I +DT+GA ++ Sbjct: 21 SADGR--LALDGRWTADQ-APTVEAAAARIAAAGRAGPVAVDLSGIERLDTLGAWVLERT 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + L+ ++ P+ + L G++ V+ Sbjct: 78 RAEIEQAGSALTYLGARPEHRILLGEVRLREPDAPPPR---RHGPVVGLLDATGRRTVQG 134 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + LG +I+ G F+G +LI Q+ V ++G P+++LISF+ G + Sbjct: 135 GHEFVTALAFLGELIAACGRVALRPGTFRGN--ALINQIQQVALNGTPIIVLISFLVGGI 192 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSAI AEIGSM++ EE+ Sbjct: 193 VAQQGIFQLQRFGAQTFVVNLIGLLILREMGVLLTSIMVAGRSGSAITAEIGSMRMREEV 252 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MGLD V ILI PR+ AL+I LP+LT++ + +A+ G + Y + F R Sbjct: 253 DALRVMGLDPVEILIVPRVLALMIGLPMLTLIGDLAALAGGGLTAMLYGGLTLDQFLVRL 312 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + ++ GLIKAPFMA IG++A EGFAV + SLG+ VT VV+SI +VI++D Sbjct: 313 QAAVGVHHVMVGLIKAPFMALTIGVIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVLD 372 Query: 362 SLFAIFYFAIG 372 LFA+F+ AI Sbjct: 373 GLFAVFFAAID 383 >gi|220924819|ref|YP_002500121.1| hypothetical protein Mnod_4961 [Methylobacterium nodulans ORS 2060] gi|219949426|gb|ACL59818.1| protein of unknown function DUF140 [Methylobacterium nodulans ORS 2060] Length = 386 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 124/370 (33%), Positives = 204/370 (55%), Gaps = 4/370 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + R +G W + + + + +DLS ++ +DT+GA ++ Sbjct: 21 SDGVQARLSGRWTADQAPAVEAAAAGIAASPAGAGRIQIDLSGLSRLDTLGAWVLERTRS 80 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + + + L+ ++ + +R +L +G + + Sbjct: 81 EIAAAGRAVEYAGARPEHRILLREVAYREPETAPARRRGLGP--VDLLAGLGAGMRQLGA 138 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + S LG V++ A F+ + + QM + + G P+++LI+F+ G ++ Sbjct: 139 EGLSWLGFLGEVVAACLRVLARPRSFRR--AAFVNQMEQIALRGTPIIMLIAFLVGCIVT 196 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA AEIGSM++ EE+DA Sbjct: 197 QQGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDA 256 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MGLD + ILI PRI AL+++LP+L LA+ +A+ G ++ Y ++ F +R + Sbjct: 257 LRVMGLDPIEILIVPRILALMMALPMLGFLADLAALAGGALTSLAYGNLSLDAFLARLQN 316 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + GLIKAPFMA IGI+A EGF V + SLG+ VT VV+SI +VI++D + Sbjct: 317 AVSYRHALVGLIKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGV 376 Query: 364 FAIFYFAIGI 373 FAIF+ AI + Sbjct: 377 FAIFFAAIDL 386 >gi|157736379|ref|YP_001489062.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] gi|157698233|gb|ABV66393.1| ABC transporter, permease protein [Arcobacter butzleri RM4018] Length = 370 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 107/365 (29%), Positives = 182/365 (49%), Gaps = 12/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 W + I + + ++ +D + + E D+ ++ F+ + K Sbjct: 18 LTLLNIWNKQTLPNIIKKIE--LLNFSKNSKLNIDFANLKECDSSAIIYLISFLNTFEEK 75 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + E++F ++ K+ ++ + FF +GKK +S Sbjct: 76 NITILNNKNHEKIFDFYKKHYQTKVLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G V + K + ++++ + + +V + SF+ G VIA QG+ Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL +FGA IF ++++SI REI L+TA++IAGRS S+ AEIG+MKI EEIDA++TM Sbjct: 186 QLEKFGANIFIVEMISITIFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L PRI+AL ISLPLL A+ + G ++ D+ F F +R H+ L Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFADIIGVFGGMVIASSSLDVTFIEFINRLHNEVPLK 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ G+ KA F AI I+ GF V ++ S+GK T VV +I +VI+ID++F++ + Sbjct: 306 HLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSIGKFTTMSVVNAIFVVILIDAVFSVIF 365 Query: 369 FAIGI 373 +GI Sbjct: 366 TQMGI 370 >gi|254292866|ref|YP_003058889.1| hypothetical protein Hbal_0490 [Hirschia baltica ATCC 49814] gi|254041397|gb|ACT58192.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814] Length = 380 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 111/370 (30%), Positives = 197/370 (53%), Gaps = 6/370 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G W + + I + +K + S +D+S + + DT GA ++ + + Sbjct: 16 GDPVMVLEGAWTAFTVGAIDKPLRQLTSKDV-SKDVSLDVSQLEDFDTAGAYVVDRTLRQ 74 Query: 65 YHGK-IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 L + + SL++ + K + +++ + F L +G V + Sbjct: 75 LGAPSGSLAKIVGDTHSVISLLTAVN--AAKPEPVKKAKDRHGFTQLLDRVGHGTVDALK 132 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +G + + K + S++ M G++ +P+V ++SF G VIA Sbjct: 133 EGWGILEFIGEAFTTVFFLLLNPKKIR--WTSVVAIMEEAGLNALPIVSMLSFFIGIVIA 190 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G L FGA++F+++++ L LRE G++LTA+++AGR+ S+ AEIG+MK+ EE+DA Sbjct: 191 FLGVNLLQSFGAQVFTVEMVGFLMLREFGLVLTAILLAGRTDSSFTAEIGAMKMREEVDA 250 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MGL+ + +L++PR+ AL++ P L+ A S ++G +V+W DI A+F R Sbjct: 251 MRVMGLNPMEVLVAPRLIALLVMTPFLSFFAMISGLVGGLLVMWGVMDISPAMFIQRIQD 310 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T N + G++KAP A I +V ++G V SLG++ T+ VVQ+I +VI+ID++ Sbjct: 311 TVPGQNFWVGIVKAPVFATVIALVGCRQGLLVSGDVQSLGQRTTSSVVQAIFLVIVIDAI 370 Query: 364 FAIFYFAIGI 373 FAI Y +G+ Sbjct: 371 FAILYMEMGL 380 >gi|78067712|ref|YP_370481.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] gi|77968457|gb|ABB09837.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] Length = 374 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 100/366 (27%), Positives = 171/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + Sbjct: 19 TVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 V+ ++ R + + P+R ++ L G+ I F Sbjct: 79 PGVALSVTQ-----RTIFERIERLDSEREAPERVVRFDPVTRL----GQAIFGFGEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL I++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|206559095|ref|YP_002229855.1| hypothetical protein BCAL0697 [Burkholderia cenocepacia J2315] gi|198035132|emb|CAR51006.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 374 Score = 258 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + Sbjct: 19 TVRLTGQWTALALARNRGAVARRVASIATGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R + L G+ I F Sbjct: 79 AGVALSATQ-----RTIFERIERLDSEREAPERVVRVDPVTRL----GQAIFSFGEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPQTMP--WRETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ L+ PR+ AL +++PLL + N A+ G +I I F + Sbjct: 248 GIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGAIAAKFVLGIDVNYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|77463402|ref|YP_352906.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77387820|gb|ABA79005.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 366 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 108/363 (29%), Positives = 191/363 (52%), Gaps = 9/363 (2%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 G + E + +D++A+ +DT GA ++ ++ + Sbjct: 13 LRGRLTIETLPETQRSLGSVGAGE------QIDMAAVEALDTAGAWALLQAQKRAEAAGQ 66 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 + E L+ + + +R + ++G+++ + + S + Sbjct: 67 ALEIVNLSESHRHLLETV-AAAMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLTSVG 125 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 G V+++ G + K L L+ M G + VP+V L+ F+ G V+A QG+ QL Sbjct: 126 FFGEVVTHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQL 183 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 FGAE++ +DL++I LRE+G+LLTA+++AGRS SA A IGSMK+ EEIDA+R +GLD Sbjct: 184 KSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVLGLD 243 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ PR+ AL+I LP L +A+ + ++G ++ W I +F ++ + +++ Sbjct: 244 PIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDVSHA 303 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF+IF+ Sbjct: 304 IIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIFFAV 363 Query: 371 IGI 373 G+ Sbjct: 364 WGL 366 >gi|91786141|ref|YP_547093.1| hypothetical protein Bpro_0230 [Polaromonas sp. JS666] gi|91695366|gb|ABE42195.1| protein of unknown function DUF140 [Polaromonas sp. JS666] Length = 383 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 88/363 (24%), Positives = 174/363 (47%), Gaps = 11/363 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 G ++ + + + ++ + DLS + ++D +GA+++ + Sbjct: 32 LTGRLVWDTLTAQLEILRRHAAPAGEASTVRWDLSGLEKLDHLGAQVLWNHWGRDW---- 87 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 Q+ K + +K+L +G + + ++ S Sbjct: 88 -----PAQLQVEPSQRAVLETVAKFAVVPPKPRGSDWKDLLVLLGNRALDLVDHSKGLVR 142 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 ++G ++ + + L +Y++G + +P+ L+ F+ G V+A + QL Sbjct: 143 LVGQLLLDIIRLVRHPKEGP--WRDLSGHLYHIGATALPITALVGFLIGVVLAYLISQQL 200 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 QFGA+ + ++++ I +RE+G +L A++IAGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 201 RQFGADAYIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVMRVTEELDAMRVMGIA 260 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 L+ PR AL + +PL+++ +A++G + + + F + AN+ Sbjct: 261 RGFRLVMPRALALAVVMPLISVWTTIAALLGGMLAADISMGVTPSYFINSLPRAVDAANL 320 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ I +V G V ++ SLG+ T VV SI++VI++D+LFA+ + + Sbjct: 321 TLATGKSVVFGVLIAMVGCHYGLRVKPNTESLGQGTTASVVTSITVVILVDALFAVVFKS 380 Query: 371 IGI 373 +GI Sbjct: 381 VGI 383 >gi|260219765|emb|CBA26623.1| hypothetical protein Csp_H39530 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 387 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 91/378 (24%), Positives = 181/378 (47%), Gaps = 16/378 (4%) Query: 1 MSEN-GITVFRFAGNWKSPEISE--IADDVVMAINKSIQ--SDSAIVDLSAITEIDTIGA 55 ++++ G W + +S + + A+ + + DL ID GA Sbjct: 21 LAQDPEGPRVILRGRWTADALSAKHVWQPLEKALQGVPGNGAPAVAWDLREAQRIDHTGA 80 Query: 56 ELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 +++ + Q L + K P + L +G Sbjct: 81 QVLWNAWGRQWPAKL---------QAEPLQKALLDRVAKFTVPTPPVERLDWHALLVSLG 131 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +K+ + + ++G ++ + + + + +Y +G + +P+ L+ Sbjct: 132 RKLARVESHLGGMVRLIGQLMLDVLQLLRHPLQGP--WRDVSGHLYRIGATALPITALVG 189 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F+ G V+A + QL Q+GA+ F ++++ + +RE+G +L A+++AGRSGSAI A+IG M Sbjct: 190 FLIGVVLAYLMSKQLRQYGADSFIVNILGMSLIRELGPVLAAILVAGRSGSAITAQIGVM 249 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ EE+DA+R MG+ L+ PR A+ I++PL+ + +A++G + + A Sbjct: 250 RVTEELDAMRVMGIPKGFRLVMPRTLAMAIAMPLVAVWTTMAALLGGMLASDLSMGLTPA 309 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 FF+ T ++N++ L+K+ I ++A G V + SLG+ T VV SI+ Sbjct: 310 YFFTALPKTVEISNLWLSLVKSCVFGVLISLLACHHGLRVKPDTQSLGEGTTASVVSSIT 369 Query: 356 IVIIIDSLFAIFYFAIGI 373 +VI++D+LFA+ + ++G+ Sbjct: 370 MVILVDALFAVIFKSVGL 387 >gi|238028752|ref|YP_002912983.1| hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1] gi|237877946|gb|ACR30279.1| Hypothetical protein bglu_1g32160 [Burkholderia glumae BGR1] Length = 390 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 102/386 (26%), Positives = 178/386 (46%), Gaps = 27/386 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI----------------VDLSAI 47 +G + R +G W + ++ VV K + A DLSAI Sbjct: 15 DGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPAAADGPARRWDLSAI 74 Query: 48 TEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 +D +G + + H ++ + +F I + + R Sbjct: 75 ERLDHVGGQALWRVWG--HRLPDGVVLTDNQRIVFERIERLDEAREAPEPVVR------- 125 Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + +G + +F + G VI + G + +Y G Sbjct: 126 HDPVTRLGLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMP--WTEISANVYNAGAKA 183 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 +P+ L++F+ G V++ A QL QFGA + ++++ + +RE+G +L+A+++AGRSGSA Sbjct: 184 LPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSA 243 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A+IG M++ EE+DA+R MG+ ++ PR+ AL +++PLL + N A+ G ++ Sbjct: 244 ITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAAK 303 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I F F +AN++ GL K I +V GF + +S SLG+ T Sbjct: 304 FALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGTT 363 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIGI 373 T VV SI++VI+ D++FAI + +G+ Sbjct: 364 TSVVSSITVVILADAVFAILFQNVGL 389 >gi|146280488|ref|YP_001170641.1| ABC transporter permease [Pseudomonas stutzeri A1501] gi|145568693|gb|ABP77799.1| probable permease of ABC transporter [Pseudomonas stutzeri A1501] Length = 362 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 112/363 (30%), Positives = 187/363 (51%), Gaps = 5/363 (1%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G+W + + +V ++ + + ++LS + +DT GA L+ + Sbjct: 4 RIVGDWTLAHYAALRREVQRL--RARIDERSQIELSGLGALDTAGAGLLAELLGPERIAA 61 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 + +L+ + S F + HIG+ + + Sbjct: 62 IEAWAPQLPAERLALLRTVATA-LDQPDAAESPRGYEFGYVLAHIGRTVAAVWKQQRALL 120 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 +GL + +++ L SL + G+ VP+V L++F+ GAV+A GA Sbjct: 121 GFIGLTLQTLLLTLPRPRRWR--LTSLAVHIEQTGLDAVPIVALLTFLVGAVVAFLGATV 178 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+ FGA I++++L+ LRE GVLL A+++AGRS SA A+IGSMK NEEIDAIRT+GL Sbjct: 179 LADFGATIYTVNLVGFSFLREFGVLLAAILLAGRSASAFAAQIGSMKSNEEIDAIRTLGL 238 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + +L+ PR+ A++I+LP+LT + S I G +V DI +FF+ +++ Sbjct: 239 SPIELLVLPRVLAMLITLPILTFVGMLSGIAGGLVVCVLALDISPTMFFNIMARDIAVSH 298 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 GL KAP A I ++ EGF V + S+G+ T+ VVQ+I +VI++D++ A+F+ Sbjct: 299 FLVGLGKAPVFAFVIAVIGCLEGFKVTGSAQSVGEHTTSSVVQAIFMVILLDAIAALFFM 358 Query: 370 AIG 372 +G Sbjct: 359 EMG 361 >gi|190892035|ref|YP_001978577.1| probable ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190697314|gb|ACE91399.1| probable ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 389 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 153/370 (41%), Positives = 227/370 (61%), Gaps = 5/370 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ R +GNW+S + + D +++ ++ + VDLS IT+IDT G L+ Sbjct: 23 SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KTGNLTVDLSEITDIDTAGIWLLCRL 80 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + + +++ ++ +P+ + + IGK Sbjct: 81 KKEEEAAGRTVRFEGTNPHIDEMLAM-FSEEPAKPEPEPKEKVSLAARILAPIGKMTYDV 139 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 140 WDNLAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 197 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI Sbjct: 198 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 257 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F +R Sbjct: 258 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARL 317 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 318 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMD 377 Query: 362 SLFAIFYFAI 371 LFA+FY AI Sbjct: 378 GLFAMFYAAI 387 >gi|239831972|ref|ZP_04680301.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239824239|gb|EEQ95807.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 391 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 150/368 (40%), Positives = 214/368 (58%), Gaps = 3/368 (0%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ R G W S + + DD V + + + ++ I+D+S ++ +DT GA LI + Sbjct: 25 DGVRHIRMNGRWVSQSV-NLVDDKVRRLENADKREATIIDISGVSGLDTAGAWLIERLRQ 83 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + + + L+ + + R + +G +V + Sbjct: 84 RLVAQQVEVQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFLISFLAALGGGVVSLGS 143 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D HILG I +++ QM +GV +P++IL+S + GA+IA Sbjct: 144 DFKMAMHILGATIRGAQ--LKYGRGSGIPFAAIVTQMDRMGVGAIPIIILMSTIVGAIIA 201 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE DA Sbjct: 202 QQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETDA 261 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + +GL+ V +L+ PR+ AL+I LPLLTI+++ +A+IGA V W Y +I F SR H Sbjct: 262 LTVIGLNPVGVLVFPRLVALVIVLPLLTIVSDLAALIGAGGVAWFYSNISPDAFISRLHD 321 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D L Sbjct: 322 AVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDGL 381 Query: 364 FAIFYFAI 371 FA+FY AI Sbjct: 382 FAMFYAAI 389 >gi|295690462|ref|YP_003594155.1| hypothetical protein Cseg_3097 [Caulobacter segnis ATCC 21756] gi|295432365|gb|ADG11537.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 386 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 107/371 (28%), Positives = 195/371 (52%), Gaps = 11/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G +G+W + + + + A++ D+ DL+ + DT GA I+ Sbjct: 27 QDGRPTAVLSGDWTARGLFDAGLRLAEALDGV---DNPTFDLTGVNRCDTAGAYAILRAA 83 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + + +L L++ + K + + + F+ L IG+ + Sbjct: 84 DE-RLKPEDVKARHGVVRLLQLVAAAIQV-----KSEPAVRPSGFRALLERIGRGVFGLF 137 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +D+ S LG +++ G + + ++ G+ +P+V +F GAV+ Sbjct: 138 SDAFSTMAFLGHLLTAVGRSIVDPRRIR--WAPIVALCERAGLDAMPIVATTTFFIGAVV 195 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L+ FGA+++S++L+ I +RE +L+TA+++AGRS S+ AEIGSMK+N+EID Sbjct: 196 ALLGANMLTDFGAQVYSVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEID 255 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MG+D L+ PR AL++++P+LT +A + + G +V+W D+ F R Sbjct: 256 AMQVMGVDPYEALVLPRFAALLLTIPILTFVATIAGLAGGILVVWIVLDLSPNFFLQRIV 315 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + GL KAP MA I + ++G VG +LG++VT VV +I +I+ID+ Sbjct: 316 DYVGPTHFWIGLSKAPVMAAVIAAIGCRQGMEVGQDVEALGRRVTAAVVHAIFAIILIDA 375 Query: 363 LFAIFYFAIGI 373 +FA+ Y + I Sbjct: 376 VFALIYMELDI 386 >gi|297538919|ref|YP_003674688.1| hypothetical protein M301_1733 [Methylotenera sp. 301] gi|297258266|gb|ADI30111.1| protein of unknown function DUF140 [Methylotenera sp. 301] Length = 378 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 5/365 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G W + + I + + + + + D S + +D GA ++ + Sbjct: 19 LTLSGAWVASTLHNIVEKI--HAIPTTIELNIVADGSGVEALDMSGAWVMQSLFSLLKAQ 76 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + + + + PQ + L HIG + + ++ Sbjct: 77 GNSITLIGFKPEFVERLKVVTYEFSHHANPQNNIEIKPPT-LLEHIGMATTEALKEAKDL 135 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G V S A + + ++ + G++ VP+V +++F+ G V+A Q A Sbjct: 136 LSFVGEVSSVFLASFADPQRIR--WRPILFNIREAGLNAVPIVGILAFLLGVVVAYQSAD 193 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL +GA IF +DL+ I LRE L+ A++IAGRSGSA A+IG+M + EEIDA+R +G Sbjct: 194 QLRHYGANIFVVDLIGISMLREFAPLIAAIIIAGRSGSAYAAQIGTMSVTEEIDAMRILG 253 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + +L+ P++ L ISLPLLT+ A+ I G + D+ F F R + Sbjct: 254 IAPMEMLVLPKLIGLAISLPLLTVWADMLGIFGGMLTASAQLDVSFVDFVGRLVKAVEMT 313 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 GL KA A I ++ +GF ++++G++ T VVQSI +VI+ D+LF++ + Sbjct: 314 TYTVGLGKAFVFAIIITMIGCFQGFRTKGGADNVGRQTTRSVVQSIFLVIVADALFSVLF 373 Query: 369 FAIGI 373 + I Sbjct: 374 SILKI 378 >gi|256828281|ref|YP_003157009.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] gi|256577457|gb|ACU88593.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] Length = 380 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 104/363 (28%), Positives = 176/363 (48%), Gaps = 14/363 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65 G EI D + DLS +T +D GA +I+ K Sbjct: 24 LSLRGIIDLRTTPEIMDRLAQL--PLPLPRRIRADLSGVTRMDDCGALVILQLRRMAEKN 81 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +K+ G H+++L + PQ + + G K + N + Sbjct: 82 GCDLKMHGTPGHVQELLDFLRLDD-------PPQSVGIKRAKPDFMTRFGIKTLDVTNQA 134 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G V+ + + L + M VGV +P+V LISF+ G ++A Sbjct: 135 VTHVSFVGEVVVTLLSLLRHPDRLR--LGDTVLYMQRVGVDALPIVGLISFLLGLIMAFM 192 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL QFGA I+ L+++ +RE+G ++TA+++AGRSGSA AEIG+MK++EE+DA+ Sbjct: 193 SAVQLQQFGANIYVASLVALAMVRELGPIMTAILVAGRSGSAFAAEIGTMKVSEEVDALV 252 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMG L++P+I A ++ +PLL + +N AI G ++ D+ + ++ +T Sbjct: 253 TMGFKPAMFLVAPKIIASVLVVPLLAMYSNLFAIAGGLLIGVTTLDLTVNAYMAQTMNTL 312 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ +I GL K+ A I V +G+ V + S+G+ T+ VV I +VI++DS+ A Sbjct: 313 SIFDINWGLFKSAIFAVLIATVGCFKGYQVRGGAASVGQATTSAVVTGIFLVILVDSILA 372 Query: 366 IFY 368 + Sbjct: 373 VIL 375 >gi|238796784|ref|ZP_04640289.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] gi|238719272|gb|EEQ11083.1| ABC transporter, permease protein [Yersinia mollaretii ATCC 43969] Length = 381 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 119/364 (32%), Positives = 186/364 (51%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + +V+ I DL+ + +DT GA L+ + + Sbjct: 21 VAARGDWVLAHYRALEPEVMQLRANLPSG--VIFDLNQLGALDTAGATLLALLLGEARVG 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + E+ L+ R + + L +IG+ +V D S Sbjct: 79 NLRELAPKLPEERRVLLETVSRVLPDLSPEPSTKAPPFWLELLSNIGRSMVNLWEDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFIGLTLEALLGTLFRPARWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|327190640|gb|EGE57728.1| putative ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 383 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 153/370 (41%), Positives = 227/370 (61%), Gaps = 5/370 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ R +GNW+S + + D +++ ++ + VDLS IT+IDT G L+ Sbjct: 17 SDGSGQHVRLSGNWRSAYVHLVLRDFEKLLHQ--KAGNLTVDLSEITDIDTAGIWLLCRL 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + + +++ ++ +P+ + + IGK Sbjct: 75 KKEEEAAGRTVRFEGTNPHIDEMLAM-FSEEPAKPEPEPKEKVSLAARILAPIGKMTYDV 133 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 134 WDNLAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 191 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAE+F +DL+ ILQLREIGVLLT++MIAGRSGSAI AEIGSMK+ EEI Sbjct: 192 IAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTSIMIAGRSGSAITAEIGSMKMREEI 251 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ + +LI PR+ AL I+LPLLT+LANF+++ GA++V W Y I FA F +R Sbjct: 252 DALKVMGLNPIGVLIFPRLVALTIALPLLTVLANFASLAGAAVVAWGYSGITFANFLARL 311 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 H TL+ + +G+IKAPFMA IGIVA EG VG + SLG+ VT VV++I +VI++D Sbjct: 312 HEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVGGSAESLGQHVTASVVKAIFVVILMD 371 Query: 362 SLFAIFYFAI 371 LFA+FY AI Sbjct: 372 GLFAMFYAAI 381 >gi|82703102|ref|YP_412668.1| hypothetical protein Nmul_A1981 [Nitrosospira multiformis ATCC 25196] gi|82411167|gb|ABB75276.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 378 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 90/370 (24%), Positives = 171/370 (46%), Gaps = 12/370 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GI GN + E + +++ + DL+ I +D GA L+ Sbjct: 20 DGIPRVIVEGNCTLTALGERIRPIAAELSEYATAPEIRWDLTQIARMDDAGAVLLWRGWG 79 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + L E+LF + T + + +GK + Sbjct: 80 NQRPRYLLV--RPEHERLFDRLEETWTPPSEAAPDRLWP--------IMVLGKAVFLLWE 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++G ++ + + +Y G + + L+ F+ G V++ Sbjct: 130 HLVGLVILMGQLVLEIKYLAGRPSRIP--WREISANLYRTGAQALGITALVGFLIGVVLS 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL FGA +F ++++ I +RE+G +L A+++AGRSGS++ A++G M++ EE+DA Sbjct: 188 YLSSRQLQIFGAHVFIVNILGISVIRELGPMLAAILVAGRSGSSMTAQLGVMRVTEELDA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+ LI P++ AL +++PL+ + + A+IG V + + F SR Sbjct: 248 LTVMGIPHSLRLILPKVIALGLAMPLVVLWTSAVALIGGMTVAELQLGLGYKFFLSRLPD 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++N++ GL K AI +++ G + ++ SLG+ T VV SI++VIIID++ Sbjct: 308 AVAVSNLWLGLGKGIVCGMAIALISCHFGLRIKSNTESLGEGTTNSVVTSITVVIIIDAI 367 Query: 364 FAIFYFAIGI 373 FA+ + +G+ Sbjct: 368 FAVIFSDVGL 377 >gi|154243867|ref|YP_001409440.1| hypothetical protein Xaut_5005 [Xanthobacter autotrophicus Py2] gi|154162989|gb|ABS70204.1| protein of unknown function DUF140 [Xanthobacter autotrophicus Py2] Length = 344 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 129/346 (37%), Positives = 193/346 (55%), Gaps = 7/346 (2%) Query: 26 DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLI 85 + V+LS IT +DT GA L+ + + + VS+ + L+ Sbjct: 4 RWDAVCAAHADAKVVSVNLSGITRMDTFGAILLERLCGAWEQEGSVPQVSSLDPRYQRLM 63 Query: 86 SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145 R + R + + +G ++V D + +G V+S G Sbjct: 64 QELERSDSRPHPQTRRS-----EGILERLGHEVVNTAKDGLDLLNFIGAVVSAMGRVAVR 118 Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 F+ S + Q+ VG VP+++LI+F+ G++IAQQ F +FGA+IF +D++ + Sbjct: 119 PRSFR--FTSTVAQLDRVGFRAVPIILLITFLVGSIIAQQSIFHFRRFGADIFVVDMVGV 176 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 L LRE+GVL+ ++MIAGRSGSA AE+GSM++ EE+DA++ MGLD + +L+ PRI ALII Sbjct: 177 LVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEVDALKVMGLDPIEVLVVPRILALII 236 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 LPLLT L + +A+IG +V W Y I VF R L G+ KAPFMA AIG Sbjct: 237 GLPLLTFLGSMAALIGGGLVAWFYGGITPNVFIDRLKQAIDLTQFEVGMYKAPFMAAAIG 296 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +VA EG VG + SLG+ T VV++I +VI++D LFA+F+ +I Sbjct: 297 LVACLEGLKVGGSAESLGQHTTASVVKAIFLVIVMDGLFAVFFASI 342 >gi|223040212|ref|ZP_03610491.1| ABC transport system permease [Campylobacter rectus RM3267] gi|222878573|gb|EEF13675.1| ABC transport system permease [Campylobacter rectus RM3267] Length = 378 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 185/371 (49%), Gaps = 9/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G +W ++I A+ S + D +++ + E+D A + + Sbjct: 17 SGGKLAINLKNDWTYKLPAQIWTQ-TAALIGSRKFDKIVLNFKDVKELDYAAALFLKNTL 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +L ++ H +++F+ I+ N K ++ +N IGK + F Sbjct: 76 LNARKNYELVNLTPHAQRIFASINSE-----VNPKIKQIINAKPHENPLSQIGKNLAAFF 130 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 C+ + G + + + ++ G+ V +V L SF+ G V+ Sbjct: 131 AGFCAFLNFTGEFLVKFSKIFMLK---NIRVKEILAYFEDAGIKSVFIVCLTSFLIGIVL 187 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG+ L +FGA I +++M +L LREI L+ A+++AGR S+ A+IG MKI EEID Sbjct: 188 AYQGSNLLERFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEEID 247 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG D + L+ PR+ ALI+++PL+ LA+ + I G +V+ Y +I F + +RF Sbjct: 248 AMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNIGFDSYLARFE 307 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GL KAPF I + GF + ++ S+G T VV +I VI++D+ Sbjct: 308 QEVEIKHLYVGLFKAPFFGVVIAFIGCMRGFQISGNTQSVGTYTTVSVVNAIFGVIMVDA 367 Query: 363 LFAIFYFAIGI 373 LF++ + +GI Sbjct: 368 LFSVIFTHLGI 378 >gi|126462257|ref|YP_001043371.1| hypothetical protein Rsph17029_1489 [Rhodobacter sphaeroides ATCC 17029] gi|126103921|gb|ABN76599.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17029] Length = 366 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 109/363 (30%), Positives = 191/363 (52%), Gaps = 9/363 (2%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 G + E + +D++A+ +DT GA I+ ++ + Sbjct: 13 LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 66 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 + E L+ + + +R + ++G+++ + + S + Sbjct: 67 ALEIVNLSESHRHLLETV-AAAMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLTSVG 125 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 G V+++ G + K L L+ M G + VP+V L+ F+ G V+A QG+ QL Sbjct: 126 FFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQL 183 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 FGAE++ +DL++I LRE+G+LLTA+++AGRS SA A IGSMK+ EEIDA+R +GLD Sbjct: 184 KSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVLGLD 243 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ PR+ AL+I LP L +A+ + ++G ++ W I +F ++ + +++ Sbjct: 244 PIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDVSHA 303 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF+IF+ Sbjct: 304 IIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIFFAV 363 Query: 371 IGI 373 G+ Sbjct: 364 WGL 366 >gi|90417915|ref|ZP_01225827.1| possible permease protein, ABC-type transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337587|gb|EAS51238.1| possible permease protein, ABC-type transporter [Aurantimonas manganoxydans SI85-9A1] Length = 377 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 138/371 (37%), Positives = 213/371 (57%), Gaps = 3/371 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G V R +G+W + + + D V A + +VD + IDT GA L+ + Sbjct: 10 RDGGLVLRASGDWLARTVGSVEDTVAEAGAADL-GRQVVVDCGDVARIDTAGALLLEKLV 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + E+ L + + + N +L G+ V Sbjct: 69 RGLGANGRDVRLEAVSERDQPLFDVVRKALDRERPQPEKRKTNRILDLVAATGRGSVAVK 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ +I+G + + + + ++ Q+ +G+ VP++ L+SF+ GA+I Sbjct: 129 DEIVVALNIIGGAMVGGVQRLTGKTQIRP--AAIFAQVEQMGLRAVPIIFLMSFLIGAII 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL +FG E+++++L +IL LREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID Sbjct: 187 AQQGAFQLRRFGGELYAVNLAAILILREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ + +L+ PR+ AL+I LPLL +AN + ++GA + + Y DI FA F Sbjct: 247 ALHVIGLNPIGVLVFPRLVALVIVLPLLAFIANLAGLLGAMLTLNIYSDISFASFGQGVQ 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + +F+G+IKAPFMA IG++A EG VG + SLG +VT VV+SI +VI++D Sbjct: 307 YSVDMFTVFSGVIKAPFMAVMIGLIASAEGMKVGGSAESLGLRVTASVVKSIFLVILMDG 366 Query: 363 LFAIFYFAIGI 373 LFAIFY +IG+ Sbjct: 367 LFAIFYASIGL 377 >gi|326388333|ref|ZP_08209929.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM 19370] gi|326207065|gb|EGD57886.1| hypothetical protein Y88_3216 [Novosphingobium nitrogenifigens DSM 19370] Length = 370 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 108/371 (29%), Positives = 190/371 (51%), Gaps = 13/371 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S F+G + + + + I++ A +DL+ + +DT+GA Sbjct: 11 SGENGDTLVFSGPMTVATLGGLDARL-----REIETPIARIDLADVPMMDTVGAWTCWRL 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ E+L + +P ++ + + +G + Sbjct: 66 SRDTGA--EIVHPCEAAERLIGALEKVD----DGGEPTQAGGLPVWLRVPAKVGDTVFGL 119 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G ++ T +F+ +L+ QM VGV+ + +V L+SF+ G V Sbjct: 120 AAGAVEVLGFFGQMLLATWGLLRHPGRFR--FNALVHQMELVGVNALAIVGLMSFLVGIV 177 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA QL QFGAE+++++L+ L LRE+G+L+TA+M+AGRSGSA A++G+MK+NEEI Sbjct: 178 IAQQGAVQLRQFGAEVYTVNLVGRLTLRELGILMTAIMVAGRSGSAFAAQLGTMKLNEEI 237 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RT+G+ + L+ PRI A ++ LP+L + + IIG + + DIPF F +R Sbjct: 238 DAMRTIGVSPMEALVLPRILATVLMLPVLGVYSAVVGIIGGAFLSSLTLDIPFFSFLARI 297 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +++ GL K P + + +G V ++ +G + T+ VV +I VI++D Sbjct: 298 REVVPVHDVWVGLFKGPVFGLIVSVAGCYQGMQVKANAEEVGLRTTSAVVMAIFTVIVLD 357 Query: 362 SLFAIFYFAIG 372 + FA+F+ +G Sbjct: 358 AFFAVFFTEVG 368 >gi|296445994|ref|ZP_06887944.1| protein of unknown function DUF140 [Methylosinus trichosporium OB3b] gi|296256512|gb|EFH03589.1| protein of unknown function DUF140 [Methylosinus trichosporium OB3b] Length = 382 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 129/369 (34%), Positives = 206/369 (55%), Gaps = 5/369 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + F AG+W +I + + A+VDL ++ +DT GA +I + Sbjct: 17 DGAAVSFALAGDWVLAAAMDIERAAEKMVADGRGATRAVVDLVHVSRLDTAGAWVIGRAL 76 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ V + L+ H ++ + + ++ +G+ +V Sbjct: 77 DELARAGVEASVEGARPEHELLLREAHFRRFET---DSRPRSSLCIDILADLGRSVVTAG 133 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D+ + A LG ++ TG A + +F+ S + + G+ VP++ LI+ + GA++ Sbjct: 134 RDAFAGAVFLGEFVAVTGRAVAIARRFR--FTSFVYHLENFGLRSVPIIALINLLVGAIV 191 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG FQL +FGA +++DL+ +L LRE+GVLL+++MIAGRSGSAI AE+GSMK+ EEID Sbjct: 192 AQQGIFQLRRFGASTYAVDLIGVLVLRELGVLLSSIMIAGRSGSAITAELGSMKMREEID 251 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MGL + L++PRI AL++++PLL +A+ SA+ G +V W Y I + Sbjct: 252 ALRVMGLSPMDALVTPRILALVVAMPLLAFIADMSALFGGLLVCWGYEGISPVAYLEWLQ 311 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + G+IKAPFMA IGIV+ EG + + SLG+ VT VV+SI +VI++D Sbjct: 312 AAIGRNTFMVGIIKAPFMAFTIGIVSAMEGMSTKGSAESLGRHVTAAVVKSIFMVIVLDG 371 Query: 363 LFAIFYFAI 371 LFAIF+ +I Sbjct: 372 LFAIFFASI 380 >gi|311232876|gb|ADP85730.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1] Length = 401 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 197/371 (53%), Gaps = 8/371 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + RF+G W + + + + DL+ + +DT GA +I F Sbjct: 38 GNTGILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF-- 94 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ QG++ + + + R I + ++ IG IV+ Sbjct: 95 --RTALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEET 152 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G+++ + ++F+ +SL M GV VP+V L+SF+ G V Sbjct: 153 EQAVGILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVT 210 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ Sbjct: 211 AYMGAEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVS 270 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 271 AMRALGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFH 330 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++ Sbjct: 331 EIVHLRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNA 390 Query: 363 LFAIFYFAIGI 373 LFAI + ++G+ Sbjct: 391 LFAILFTSLGV 401 >gi|94263506|ref|ZP_01287318.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456144|gb|EAT06287.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 379 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 95/372 (25%), Positives = 176/372 (47%), Gaps = 11/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +GI G ++ I + ++ + K+ ++D+ + +D G L+++F Sbjct: 19 SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + V + + + + +G+ V Sbjct: 77 SRLMQDSNRPVEVRGLRPDFRHIQEQIDCFDYRPKP------LQRRLSAVEELGRAAVNL 130 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +G +S+ A + ++ M VG V ++ L+ F+ G + Sbjct: 131 GRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLIGVI 188 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IA Q A L FGAE+F L+ + +RE+G L+TA+++AGRSGSA AEIG+MK NEEI Sbjct: 189 IAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTNEEI 248 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 +A++TMGL+ VR L+ PR+ A ++ PLL + + IG ++V+ D + + Sbjct: 249 NALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYVHQL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +A+ G++K + + V G G ++++G+ T+ VV +I ++I+ D Sbjct: 308 STSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILIILAD 367 Query: 362 SLFAIFYFAIGI 373 +FA+ Y+ +GI Sbjct: 368 GIFAVVYYMLGI 379 >gi|255322244|ref|ZP_05363390.1| ABC transport system permease [Campylobacter showae RM3277] gi|255300617|gb|EET79888.1| ABC transport system permease [Campylobacter showae RM3277] Length = 378 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 108/371 (29%), Positives = 183/371 (49%), Gaps = 9/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G NW ++I A+ S + + +++ I E+D A Sbjct: 17 SGGKLTINLKNNWNYKLPAQIWTQ-TAALIGSKKFNKIVLNFKEIKELDYAAALFFKNTF 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 +L ++ H +++F+ I+ N K ++ +N IGK + F Sbjct: 76 LNACKNYELVNLTPHAQKIFASINSE-----INPKIKQIIDAKPHENPFSQIGKNLTAFF 130 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 C+ + G + + + ++ G+ V +V L SF+ G V+ Sbjct: 131 AGFCAFLNFTGEFLVKFSKIFMLK---NIRVKEILAYFEDAGIKSVFIVCLTSFLIGIVL 187 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG+ L FGA I +++M +L LREI L+ A+++AGR S+ A+IG MKI EEID Sbjct: 188 AYQGSNLLESFGATIIIVEMMGLLTLREIAPLIAAIIVAGRLASSFTAQIGVMKITEEID 247 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG D + L+ PR+ ALI+++PL+ LA+ + I G +V+ Y +I F + +RF Sbjct: 248 AMKTMGFDPFKFLVLPRVIALIVAMPLIVFLADVAGIFGEMVVMENYLNISFDSYLARFS 307 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +++ GL KAPF I + GF +G ++ S+G T VV +I VI++D+ Sbjct: 308 QEVDIKHLYVGLFKAPFFGIVIAFIGCMRGFQIGGNTQSVGTYTTVSVVNAIFGVIMVDA 367 Query: 363 LFAIFYFAIGI 373 LF+I + +GI Sbjct: 368 LFSIIFTQLGI 378 >gi|256061111|ref|ZP_05451265.1| hypothetical protein Bneo5_12197 [Brucella neotomae 5K33] gi|261325112|ref|ZP_05964309.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261301092|gb|EEY04589.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 391 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LP LTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPPLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|153009437|ref|YP_001370652.1| hypothetical protein Oant_2107 [Ochrobactrum anthropi ATCC 49188] gi|151561325|gb|ABS14823.1| protein of unknown function DUF140 [Ochrobactrum anthropi ATCC 49188] Length = 391 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 151/369 (40%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G R +G W S + + DD + ++ K+ + + I+D+S ++ +DT GA LI Sbjct: 24 QDGARHIRLSGRWVSQSV-NLVDDKMRSLEKTDEHKATIIDVSGVSGLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + + L+ + + R F + +G ++ Sbjct: 83 QRLVAKSADAQLEGVRQSWLPLMEEVGQAVERTLDIPRQKKPFFFISFLAALGGGVISMG 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P++IL+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGSGIPI--AAIVTQMDRMGVGAIPIIILMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTI+++ +A+IGA V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVVLPLLTIISDLAALIGAGGVAWFYSNISPDAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|221069470|ref|ZP_03545575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220714493|gb|EED69861.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 375 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 10/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G G W + E+ + +A DL + +D IGA+L+ Sbjct: 14 SRDGQQWAVPVGRWSAAELGDRHIWRRLAPQIRAVPKGVAWDLQQMVWLDHIGAQLLWEQ 73 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + L + S R ++ P+ + + +G+ ++ Sbjct: 74 WGRTWPARLLTTKNQR--------SMLERVARFSEVPEAKPEPSGWMCEVNRLGQMVIDA 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + ++G ++ + + F+G + +Y G + +P+ L+ F+ G V Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--FRGPWRDISGHLYATGATALPITALVGFLIGVV 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A A QL QFGAE F ++++ I +RE+G LL A+++AGRSGSAI A+IG M++ EE+ Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+ L+ PR AL +S+PL+ + +A+ G + DI + F Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFIQSL 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + N+ + K+ I ++ G V ++ SLG+ T VV SI++VII+D Sbjct: 304 PAAVKIGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363 Query: 362 SLFAIFYFAIG 372 ++FAI + +G Sbjct: 364 AIFAILFRNVG 374 >gi|188580085|ref|YP_001923530.1| hypothetical protein Mpop_0817 [Methylobacterium populi BJ001] gi|179343583|gb|ACB78995.1| protein of unknown function DUF140 [Methylobacterium populi BJ001] Length = 382 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 136/373 (36%), Positives = 205/373 (54%), Gaps = 12/373 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G G W + + + I + +VDLS + +DT+GA ++ Sbjct: 18 DAGDGRVILHGRWTADQ-GPAVESASARIAAQGRRQPVLVDLSGLARLDTLGAWVLERTR 76 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E G++ G L + + +P N L G+++ Sbjct: 77 AEIEAAGGRLAYAGARPEHRILLGEMGL------REPEPAPRDARNPVVRLLDGTGRRVA 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + N+ S LG V++ G F+ +L+ Q+ V + GVP+++LISF+ G Sbjct: 131 RGGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLVG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ E Sbjct: 189 GIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMRE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F + Sbjct: 249 EVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTVDAFLA 308 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI+ Sbjct: 309 RLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIV 368 Query: 360 IDSLFAIFYFAIG 372 +D LFA+F+ AI Sbjct: 369 LDGLFAVFFAAID 381 >gi|254714105|ref|ZP_05175916.1| Sulfate transporter/antisigma-factor [Brucella ceti M644/93/1] gi|254716838|ref|ZP_05178649.1| Sulfate transporter/antisigma-factor [Brucella ceti M13/05/1] gi|261218640|ref|ZP_05932921.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261321862|ref|ZP_05961059.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260923729|gb|EEX90297.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294552|gb|EEX98048.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 391 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++GI V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGIRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+G LLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGGLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|225627497|ref|ZP_03785534.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo] gi|260168729|ref|ZP_05755540.1| Sulfate transporter/antisigma-factor [Brucella sp. F5/99] gi|261758207|ref|ZP_06001916.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99] gi|225617502|gb|EEH14547.1| toulene ABC transporter permease protein [Brucella ceti str. Cudo] gi|261738191|gb|EEY26187.1| sulfate transporter/antisigma-factor [Brucella sp. F5/99] Length = 391 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRTGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|170734244|ref|YP_001766191.1| hypothetical protein Bcenmc03_2910 [Burkholderia cenocepacia MC0-3] gi|169817486|gb|ACA92069.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3] Length = 374 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + Sbjct: 19 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R ++ L G I F Sbjct: 79 AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKLVLGIDINYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|94263144|ref|ZP_01286962.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456515|gb|EAT06629.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 379 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 11/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +GI G ++ I + ++ + K+ ++D+ + +D G L+++F Sbjct: 19 SADGILHAVVRGRMEAGSIGPLWQELASKLKKTRAG--LVLDVEKVDYLDMSGQALLLHF 76 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + R ++ QR + +G+ V Sbjct: 77 SRLMQDGNLPVEIRGLHPDFRHIQEQISRFDCHSKPAQRR------LSAVEELGRAAVNL 130 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D +G +S+ A + ++ M VG V ++ L+ F+ G + Sbjct: 131 GRDIGQFFSFVGEFVSSLAYCLAHPGTVR--WKDVLSHMENVGGRAVFIIALMGFLIGVI 188 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IA Q A L FGAE+F L+ + +RE+G L+TA+++AGRSGSA AEIG+MK NEEI Sbjct: 189 IAFQTAITLKTFGAEMFVAKLLGLSMVRELGPLVTAIILAGRSGSAFAAEIGTMKTNEEI 248 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 +A++TMGL+ VR L+ PR+ A ++ PLL + + IG ++V+ D + + Sbjct: 249 NALQTMGLNPVRFLVVPRMLATMLVTPLLCVFFLLFSFIGGALVM-LSMDFTLNSYVHQL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +A+ G++K + + V G G ++++G+ T+ VV +I ++I+ D Sbjct: 308 STSVGMADFLGGMVKVLVFSILVAWVGCVRGLQTGSGASAVGRSTTSAVVSAIILIILAD 367 Query: 362 SLFAIFYFAIGI 373 +FA+ Y+ +GI Sbjct: 368 GIFAVVYYMLGI 379 >gi|194364302|ref|YP_002026912.1| hypothetical protein Smal_0524 [Stenotrophomonas maltophilia R551-3] gi|194347106|gb|ACF50229.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia R551-3] Length = 373 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 111/365 (30%), Positives = 188/365 (51%), Gaps = 13/365 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G W A+ + + + +D + I ++D+ G ++ + Sbjct: 21 LIRLSGTWTLKTALAAAEVL-----RDVPDTLTGIDATGIEKMDSAGVLQVLRVAHRADL 75 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + L I + K + +G + ++ + Sbjct: 76 GEDALQFRPDHQALVCTIEEVADDRPKPK------RDFGVLAALERLGVSVHATGHNIKA 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA G+ Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA+RT+ Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + +L+ PR++AL+++LPLLT +A + + G V DIP ++ +R H T + Sbjct: 248 GLDPIDLLVLPRLFALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHDTMEV 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ A++ Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367 Query: 368 YFAIG 372 + + Sbjct: 368 FMHMD 372 >gi|268678744|ref|YP_003303175.1| hypothetical protein Sdel_0102 [Sulfurospirillum deleyianum DSM 6946] gi|268616775|gb|ACZ11140.1| protein of unknown function DUF140 [Sulfurospirillum deleyianum DSM 6946] Length = 376 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 13/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G +V G W + + K S D S+I DT G L+++ Sbjct: 12 NSEGFSVI-VRGKWVKESVPLLQSAFTSLTCK--PHASYTFDFSSIETFDTHGIMLLLHH 68 Query: 62 MEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++K + ++ G S + LFS+ + ++ K + + ++G+ + Sbjct: 69 IKKLEKEYCIVQTTGASDAFKTLFSICQTHYPHEVPRPKKE-----RMVLSFLENVGRTM 123 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ S G + G + L + + + G +P+++L SF+ Sbjct: 124 MEGYKTLASFFSFTGELSHAIGALFFKPANIR--LKATLYHIEQSGAGAIPIILLTSFLI 181 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G VIA QGA QL +FGA IF +++++I +RE+ LLTA+++AGRS S+ A+IG MK+ Sbjct: 182 GVVIAYQGASQLEKFGANIFIVEMITISAVRELAPLLTAIVVAGRSASSYTAQIGVMKLT 241 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+ +MG L+ PR++ALIISLPLL A+ + G ++ D+ F F Sbjct: 242 DEIDAMSSMGFSPWNFLVLPRLFALIISLPLLVFFADVVSTFGGMVIASTRLDVSFVEFI 301 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 R T L ++ GL+KAP C I + GF + ++ S+GK T VV +I VI Sbjct: 302 DRIKETVALKHLVIGLVKAPIFGCIIATIGCFRGFQITSNTESVGKYTTISVVNAIFWVI 361 Query: 359 IIDSLFAIFYFAI 371 +D+L ++F + Sbjct: 362 AMDALISVFLTEL 374 >gi|160895814|ref|YP_001561396.1| hypothetical protein Daci_0365 [Delftia acidovorans SPH-1] gi|160361398|gb|ABX33011.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1] Length = 376 Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats. Identities = 92/372 (24%), Positives = 179/372 (48%), Gaps = 11/372 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +N G+W + E+ A + A + D +L + +D +GA+L+ Sbjct: 15 DNDGQWALLTGSWGAAELGRRAQWRKLRAQLADAKGDDLGWNLEGLDWLDHVGAQLLWNH 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + + + + R +++P + +G ++ Sbjct: 75 WGRR--------LPARLAASDAQRAMLERVGRFSKEPAPPPPRLNLLERIDSLGCLVINA 126 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++G ++ + F + + +G + +Y +G + +P+ L+ F+ G V Sbjct: 127 CGHFAQMTRLIGQLLIDLLRFARAPH--RGPWRDISGHLYSMGATALPITALVGFLIGVV 184 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A A QL QFGAE F ++++ I +RE+G LL A+++AGR+GSAI A+IG M++ EE+ Sbjct: 185 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRTGSAITAQIGVMRVTEEL 244 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+ L+ PR AL I++PL+++ +A+ G + + A F Sbjct: 245 DAMQVMGIPHGFRLVLPRALALAIAMPLVSLWTTLAALAGGMLAADLTMGVTGAYFAEAL 304 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + N++ + K+ I ++ G V ++ SLGK T VV +I++VI++D Sbjct: 305 PAAVKIGNLWIAMGKSVVFGALIALIGCHWGLRVEPNTQSLGKGTTASVVTAITMVIVVD 364 Query: 362 SLFAIFYFAIGI 373 ++FAI + +GI Sbjct: 365 AIFAILFKDVGI 376 >gi|300917987|ref|ZP_07134613.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300414813|gb|EFJ98123.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 381 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 180/364 (49%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + V + DL+ + +DT GA L+ + + Sbjct: 21 VYIRGDWVLAHYCVLEPRVAQLRANMPSGG--VFDLNQLGALDTAGATLLALLLGEDRVA 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + E+ L+ + + + G+ + D S Sbjct: 79 NLRELAPKLPEERRILLETVSHVLPDLTPELSEKPTRFWLEMLANTGRSVDNLWQDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFIGLALETLLGTLFRPSRWRI--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|46579026|ref|YP_009834.1| STAS domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448439|gb|AAS95093.1| STAS domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 406 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 197/371 (53%), Gaps = 8/371 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + RF+G W + + + + DL+ + +DT GA +I F Sbjct: 43 GNTGILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF-- 99 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ QG++ + + + R I + ++ IG IV+ Sbjct: 100 --RTALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEET 157 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G+++ + ++F+ +SL M GV VP+V L+SF+ G V Sbjct: 158 EQAVGILAFMGMLVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVT 215 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ Sbjct: 216 AYMGAEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVS 275 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 276 AMRALGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFH 335 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++ Sbjct: 336 EIVHLRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNA 395 Query: 363 LFAIFYFAIGI 373 LFAI + ++G+ Sbjct: 396 LFAILFTSLGV 406 >gi|238789963|ref|ZP_04633742.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] gi|238721911|gb|EEQ13572.1| ABC transporter, permease protein [Yersinia frederiksenii ATCC 33641] Length = 381 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W S + +V + I DL+ + +DT GA L+ + Sbjct: 21 VSVKGDWVLAHYSVLEPEVTQLRANLPHA--VIFDLNQLGALDTAGATLLALLLGDERIN 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + ++ L+ + + + L + G+ + D S Sbjct: 79 KLRELAPKLPQERRVLLETVSHVLPGLEPESSEKPPSFWLELLANTGRSMDNLWQDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFVGLTLEALFGTVFRPSRWRV--TSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V +I +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLNISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|298530599|ref|ZP_07018001.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] gi|298509973|gb|EFI33877.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] Length = 379 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 176/370 (47%), Gaps = 11/370 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 GI G ++ I + ++ + K+ ++D+ + +D G L+++F Sbjct: 21 EGILHAVVRGRMEAGSIGPLWKELASKLKKNRAG--LVLDVEKVDYMDMSGQALLLHFSR 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + V +L + + + QR + +G+ V Sbjct: 79 QMQDRNLSVEVRGLRPELREIQEEIDCFDCRPRPMQRK------LSALEELGRAAVNLGR 132 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D+ +G +S+ + ++ M VG V ++ L+ F+ G +IA Sbjct: 133 DTRQFFSFVGEFVSSFAYSLTHPGTVR--WKDVLSHMEAVGGRAVFIIALMGFLIGVIIA 190 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A L FGAEIF L+ + +RE+G L+T++++AGRSGSA AEIG+MK NEEI+A Sbjct: 191 FQTAITLRAFGAEIFVAKLLGLSIVRELGPLVTSIILAGRSGSAFAAEIGTMKTNEEINA 250 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TMGL VR L+ PR+ A ++ PLL I + IG ++V+ D + + + Sbjct: 251 LQTMGLSPVRFLVVPRMLAAMLVTPLLCIFFLLFSFIGGALVM-LSMDFTLTTYIHQLKT 309 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + + ++K + + + G G ++++G+ T+ VV +I ++I+ D + Sbjct: 310 SVGMTDFLGSMVKVFVFSILVAWIGCVRGLQTGSGASAVGRSTTSAVVSAIVLIILADGI 369 Query: 364 FAIFYFAIGI 373 FA+ Y+ +GI Sbjct: 370 FAVVYYMLGI 379 >gi|238791990|ref|ZP_04635626.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909] gi|238728621|gb|EEQ20139.1| ABC transporter, permease protein [Yersinia intermedia ATCC 29909] Length = 381 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 180/364 (49%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + V + DL+ + +DT GA L+ + + Sbjct: 21 VYIRGDWVLAHYCVLEPRVAQLRANMPSGG--VFDLNQLGALDTAGATLLALLLGEDRVA 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + E+ L+ + + + G+ + D S Sbjct: 79 NLRELAPKLPEERRILLETVSHVLPDLTPELSEKPARFWLEMLANTGRSVDNLWQDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFIGLALETLLGTLFRPSRWRI--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|120603385|ref|YP_967785.1| hypothetical protein Dvul_2342 [Desulfovibrio vulgaris DP4] gi|120563614|gb|ABM29358.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4] Length = 406 Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats. Identities = 118/371 (31%), Positives = 196/371 (52%), Gaps = 8/371 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + RF+G W + + + + DL+ + +DT GA +I F Sbjct: 43 GNTGILRFSGAWDVATAARARGQL-QHLAIPAECGDLTFDLTGVLRLDTAGALVITTF-- 99 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHR-KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ QG++ + + + R I + ++ IG IV+ Sbjct: 100 --RTALEKQGIAPLLHCAPAHNALIDRVAAIDMSEAPTVRHASALARTLNAIGASIVEET 157 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G+ + + ++F+ +SL M GV VP+V L+SF+ G V Sbjct: 158 EQAVGILAFMGMFVISLVGLVLRPWRFR--WVSLCSHMEQTGVQAVPIVALLSFLIGLVT 215 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA Q ++FGA++F I+L+ I LRE+GVLLTA+++AGRSGS+ A+IG+M NEE+ Sbjct: 216 AYMGAEQFARFGAQVFVINLLEISTLREMGVLLTALVVAGRSGSSFTAQIGAMVANEEVS 275 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +GLD + +L+ PR+ AL++ LP+L +A+ I+G + W I A F +RFH Sbjct: 276 AMRALGLDPIEVLVVPRVLALVVMLPILAFIADIMGILGGGVAAWGTLGIDPANFTARFH 335 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L N G+IKAPF A I +V +GF V + S+G+ T VV++I +VI++++ Sbjct: 336 EIVQLRNFVVGMIKAPFFALVIALVGCFQGFRVTGSAESVGRLTTQAVVEAIFMVIVLNA 395 Query: 363 LFAIFYFAIGI 373 LFAI + ++G+ Sbjct: 396 LFAILFTSLGV 406 >gi|17987248|ref|NP_539882.1| toluene tolerance protein Ttg2B [Brucella melitensis bv. 1 str. 16M] gi|17982923|gb|AAL52146.1| toluene tolerance protein ttg2b [Brucella melitensis bv. 1 str. 16M] Length = 390 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 QDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 81 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 82 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 141 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 142 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 199 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 200 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 259 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 260 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 319 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 320 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 379 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 380 LFAMFYAAI 388 >gi|189024185|ref|YP_001934953.1| Sulfate transporter/antisigma-factor [Brucella abortus S19] gi|189019757|gb|ACD72479.1| Sulfate transporter/antisigma-factor [Brucella abortus S19] Length = 390 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 23 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 81 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 82 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 141 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 142 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 199 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 200 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 259 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 260 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 319 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 320 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 379 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 380 LFAMFYAAI 388 >gi|134096148|ref|YP_001101223.1| putative transmembrane protein [Herminiimonas arsenicoxydans] gi|133740051|emb|CAL63102.1| Conserved hypothetical protein, putative ABC transporter [Herminiimonas arsenicoxydans] Length = 374 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 13/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIA--DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 N AG+W+ ++ + + + ++++ DLS IT +D IGA+L+ Sbjct: 14 NDNATATAAGSWQVRALAAPETMAAITAVLQTAGKAETVHWDLSQITALDYIGAQLLWNA 73 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 K ++ F + T + K + + S L + Sbjct: 74 WGKKRPAQLT--LAPQHADFFLRLEQTGPLEWKKPPQKYWYSLTSLLQLKH-------NI 124 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ ++G + + G F +G + +++ G + + L+ F+ G V Sbjct: 125 LDHLLGFISLIGQLTMDIGRFAREPQ--RGPWKEISANIFHAGYQALGITALVGFLIGVV 182 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL QFG ++F ++++ + +RE+G LL A+++AGRSGS+I A++G M++ EE+ Sbjct: 183 LSYLSAQQLHQFGGDVFLVNILGMSVIRELGPLLAAILVAGRSGSSITAQLGVMRVTEEL 242 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MGL L+ P++ AL I++PLL + + A+IG + + F Sbjct: 243 DAMLVMGLPHGYRLVMPKVIALAIAMPLLVVWTDAMALIGGMAAANLELGLSYKYFIREL 302 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 LAN + GL K I +VA G + ++ SLG T VV +I+IVI+ D Sbjct: 303 PDAVPLANYWIGLGKGVVFGALIALVACHFGLRIKPNTESLGAGTTISVVSAITIVILAD 362 Query: 362 SLFAIFYFAIG 372 +LFAI + +G Sbjct: 363 ALFAIIFSKVG 373 >gi|254689249|ref|ZP_05152503.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 6 str. 870] gi|260754755|ref|ZP_05867103.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260674863|gb|EEX61684.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] Length = 391 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKYVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|317181149|dbj|BAJ58935.1| hypothetical protein HPF32_1353 [Helicobacter pylori F32] Length = 377 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + S Y + +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKESKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|238751983|ref|ZP_04613468.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380] gi|238709817|gb|EEQ02050.1| ABC transporter, permease protein [Yersinia rohdei ATCC 43380] Length = 381 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W E+ V + DL+ + +DT GA L+ + + Sbjct: 21 VSAKGDWVLVHYRELEPQVAQLRANLPHG--VVFDLNQLGALDTAGAALLAVLLGEERIS 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + ++ L+ + + + L G+ + D S Sbjct: 79 HLRELAPNLPQERRVLLETVSQVLPNIEPESTEKPPAFWLELLAGTGRTVDNLWQDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFVGLTLETLLGTLFRPSRWRV--TSLIANVQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V +I +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMVCGIFGGMVVCALELNISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G+ TT VVQSI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGEHTTTSVVQSIFVVILLDAIAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|163843287|ref|YP_001627691.1| hypothetical protein BSUIS_A1062 [Brucella suis ATCC 23445] gi|163674010|gb|ABY38121.1| protein of unknown function DUF140 [Brucella suis ATCC 23445] Length = 391 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY I Sbjct: 381 LFAMFYATI 389 >gi|225852524|ref|YP_002732757.1| hypothetical protein BMEA_A1060 [Brucella melitensis ATCC 23457] gi|256044678|ref|ZP_05447582.1| hypothetical protein Bmelb1R_09298 [Brucella melitensis bv. 1 str. Rev.1] gi|256113572|ref|ZP_05454392.1| hypothetical protein Bmelb3E_12477 [Brucella melitensis bv. 3 str. Ether] gi|256263986|ref|ZP_05466518.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2 str. 63/9] gi|260564024|ref|ZP_05834510.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1 str. 16M] gi|265991102|ref|ZP_06103659.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994939|ref|ZP_06107496.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|225640889|gb|ACO00803.1| protein of unknown function DUF140 [Brucella melitensis ATCC 23457] gi|260154040|gb|EEW89132.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 1 str. 16M] gi|262766052|gb|EEZ11841.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263001886|gb|EEZ14461.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094130|gb|EEZ18052.1| sulfate transporter/antisigma-factor [Brucella melitensis bv. 2 str. 63/9] gi|326409040|gb|ADZ66105.1| conserved hypothetical protein [Brucella melitensis M28] gi|326538749|gb|ADZ86964.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 391 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGPWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|23501899|ref|NP_698026.1| toulene ABC transporter permease [Brucella suis 1330] gi|62289942|ref|YP_221735.1| toulene ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82699870|ref|YP_414444.1| sulfate transporter [Brucella melitensis biovar Abortus 2308] gi|237815443|ref|ZP_04594441.1| toulene ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|254697384|ref|ZP_05159212.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 2 str. 86/8/59] gi|254706786|ref|ZP_05168614.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis M163/99/10] gi|254730282|ref|ZP_05188860.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 4 str. 292] gi|256031600|ref|ZP_05445214.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis M292/94/1] gi|256159738|ref|ZP_05457485.1| Sulfate transporter/antisigma-factor [Brucella ceti M490/95/1] gi|256255000|ref|ZP_05460536.1| Sulfate transporter/antisigma-factor [Brucella ceti B1/94] gi|256257499|ref|ZP_05463035.1| Sulfate transporter/antisigma-factor [Brucella abortus bv. 9 str. C68] gi|256369443|ref|YP_003106951.1| toluene ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260545309|ref|ZP_05821050.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038] gi|260757978|ref|ZP_05870326.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761801|ref|ZP_05874144.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883775|ref|ZP_05895389.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261222188|ref|ZP_05936469.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261314254|ref|ZP_05953451.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|265988688|ref|ZP_06101245.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265998152|ref|ZP_06110709.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|297248343|ref|ZP_06932061.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196] gi|23347840|gb|AAN29941.1| toulene ABC transporter, permease protein, putative [Brucella suis 1330] gi|62196074|gb|AAX74374.1| hypothetical toulene ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82615971|emb|CAJ10994.1| Sulfate transporter/antisigma-factor antagonist STAS:Protein of unknown function DUF140 [Brucella melitensis biovar Abortus 2308] gi|237790280|gb|EEP64490.1| toulene ABC transporter, permease protein [Brucella abortus str. 2308 A] gi|255999603|gb|ACU48002.1| toluene ABC transporter, permease protein, putative [Brucella microti CCM 4915] gi|260096716|gb|EEW80591.1| sulfate transporter/antisigma-factor [Brucella abortus NCTC 8038] gi|260668296|gb|EEX55236.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260672233|gb|EEX59054.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260873303|gb|EEX80372.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260920772|gb|EEX87425.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261303280|gb|EEY06777.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|262552620|gb|EEZ08610.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264660885|gb|EEZ31146.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|297175512|gb|EFH34859.1| ABC transport system permease [Brucella abortus bv. 5 str. B3196] Length = 391 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|294852390|ref|ZP_06793063.1| ABC transport system permease [Brucella sp. NVSL 07-0026] gi|294820979|gb|EFG37978.1| ABC transport system permease [Brucella sp. NVSL 07-0026] Length = 391 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 153/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+++L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIIVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|306840506|ref|ZP_07473265.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2] gi|306843893|ref|ZP_07476488.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1] gi|306275648|gb|EFM57372.1| Sulfate transporter/antisigma-factor [Brucella sp. BO1] gi|306289521|gb|EFM60739.1| Sulfate transporter/antisigma-factor [Brucella sp. BO2] Length = 391 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 152/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G V +G+W S + ++ DD + I ++ + +D+S I+ +DT GA LI Sbjct: 24 QDGARVIHLSGHWISQSV-QLVDDKMRGIEQAGGDKATTIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 +FA+FY AI Sbjct: 381 MFAMFYAAI 389 >gi|330861182|emb|CBX71439.1| hypothetical protein YEW_CA08640 [Yersinia enterocolitica W22703] Length = 381 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + V ++ Q S + DL+ + +DT GA L+ + Sbjct: 21 VSIKGDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERIN 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + E+ +L+ R + + + G+ + D S Sbjct: 79 HLRELAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFVGLTLEALFSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|161618971|ref|YP_001592858.1| hypothetical protein BCAN_A1034 [Brucella canis ATCC 23365] gi|254704312|ref|ZP_05166140.1| hypothetical protein Bsuib36_10354 [Brucella suis bv. 3 str. 686] gi|260566441|ref|ZP_05836911.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40] gi|261754981|ref|ZP_05998690.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|161335782|gb|ABX62087.1| protein of unknown function DUF140 [Brucella canis ATCC 23365] gi|260155959|gb|EEW91039.1| sulfate transporter/antisigma-factor [Brucella suis bv. 4 str. 40] gi|261744734|gb|EEY32660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 391 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F S H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISHLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|328543112|ref|YP_004303221.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] gi|326412858|gb|ADZ69921.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] Length = 381 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 202/371 (54%), Gaps = 6/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +G+W + + + + + +DLS I+ +DT GA L+ Sbjct: 17 DGDRLAVALSGDWTIHTAMDAEAAL--GVIDTSDVGTVRIDLSGISVLDTSGAWLLHRMR 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ + L+S P+ + S ++ G+ +V Sbjct: 75 GRIEFAGVRVILTGVAPKYELLLSEVDAHHPPPWSPE--RYRYSIVSVLETTGRHVVDAG 132 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D + HILG + + +G S+ Q + VP++ L+SF+ GA+I Sbjct: 133 KDLVAMMHILGSLSVVVAGVLFRPGRLRGI--SIAVQFDKSCIGAVPIIALMSFLIGAII 190 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F L QFGA++F +DL +L LREIGVLLTA+M+AGRSGSA AE+GSMK+ EEID Sbjct: 191 AQQGGFYLRQFGADLFVVDLAGVLVLREIGVLLTAIMVAGRSGSAFTAELGSMKMQEEID 250 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL +LI PR+ AL++++P+LT +++ +A+ G+ +V W Y IP A + +R Sbjct: 251 ALHVIGLSVTEVLILPRLLALMVAMPVLTFVSDIAALFGSGLVTWSYLGIPPAAYMARLE 310 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + G++KAPFMA IG++A EG VG ++SLG+ T VV++I +VI++D Sbjct: 311 EAISFQTFLVGMVKAPFMALIIGLIACVEGLKVGGSADSLGRHTTMSVVKAIFLVIVVDG 370 Query: 363 LFAIFYFAIGI 373 LFAIF+ AI + Sbjct: 371 LFAIFFAAIDV 381 >gi|317178170|dbj|BAJ55959.1| hypothetical protein HPF16_1362 [Helicobacter pylori F16] Length = 377 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKEGKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|254701770|ref|ZP_05163598.1| Sulfate transporter/antisigma-factor [Brucella suis bv. 5 str. 513] gi|261752323|ref|ZP_05996032.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261742076|gb|EEY30002.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 391 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSCLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|254693733|ref|ZP_05155561.1| hypothetical protein Babob3T_03544 [Brucella abortus bv. 3 str. Tulya] gi|261214007|ref|ZP_05928288.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260915614|gb|EEX82475.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 391 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLAALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|94309017|ref|YP_582227.1| hypothetical protein Rmet_0072 [Cupriavidus metallidurans CH34] gi|93352869|gb|ABF06958.1| ABC transporter, inner membrane subunit [Cupriavidus metallidurans CH34] Length = 376 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 14/368 (3%) Query: 9 FRFAGNWKSPEISEIADDV---VMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G W + ++ + S A L IT +D IGA+LI + Sbjct: 20 VQLQGEWTAVALAGCHEARGLRAQLHELSEAPRHAEWSLDGITRLDHIGAQLIWQAWNGH 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 L + + N +G ++ F+ Sbjct: 80 M---------PDNVSLNDGQKRVFARIAGLRTEGWKKHMVERFNPVTIVGASVLSFLAQL 130 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG ++ + F + +G + +Y VG + + L++F+ G V++ Sbjct: 131 GVGVTMLGQLVFDLLRFLRAPQ--RGPWREISANIYNVGYKALGITALVAFLIGIVLSYL 188 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA F ++++ + +RE+G +L A++IAGRSGSAI A+IG M++ EE+DA+ Sbjct: 189 SANQLRIFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEELDAMS 248 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ L+ PR+ AL IS+PLL + A+ G + DI + F + Sbjct: 249 VMGISHGFRLVMPRVIALAISMPLLVAWTDLLALFGGMVAARLQLDISYVYFLRQLPDAV 308 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN++ GL K I + A G V ++ SLG+ T VV SI++VII D++FA Sbjct: 309 PVANLWFGLCKGVVFGMLIALTACHFGLRVKPNTQSLGQGTTASVVTSITVVIIADAVFA 368 Query: 366 IFYFAIGI 373 I + IGI Sbjct: 369 ILFKDIGI 376 >gi|153951693|ref|YP_001398923.1| ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152939139|gb|ABS43880.1| putative ABC transporter, permease protein [Campylobacter jejuni subsp. doylei 269.97] Length = 369 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 187/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + EIDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKEIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLNKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL+KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSAGI 369 >gi|221639257|ref|YP_002525519.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221160038|gb|ACM01018.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 356 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 109/363 (30%), Positives = 191/363 (52%), Gaps = 9/363 (2%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 G + E + +D++A+ +DT GA I+ ++ + Sbjct: 3 LRGRLTIETLPETQRSLGSV------GAGGQIDMAAVEALDTAGAWAILQAQKRAEAAGQ 56 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 + E L+ + + +R + ++G+++ + + S + Sbjct: 57 ALEIVNLSESHRHLLETV-AAAMPEPERRRRTIPGRPDDGLANLGQEVAQGLRGSLTSVG 115 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 G V+++ G + K L L+ M G + VP+V L+ F+ G V+A QG+ QL Sbjct: 116 FFGEVVAHLGALVLHPTRLK--LTPLVHHMQEAGWNAVPIVSLMGFLIGIVLAFQGSTQL 173 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 FGAE++ +DL++I LRE+G+LLTA+++AGRS SA A IGSMK+ EEIDA+R +GLD Sbjct: 174 KSFGAEVYVVDLVAISILRELGILLTAIIVAGRSASAFTAAIGSMKMREEIDAMRVLGLD 233 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ PR+ AL+I LP L +A+ + ++G ++ W I +F ++ + +++ Sbjct: 234 PIDRLVLPRLIALVILLPALGFIASLAGLVGGGLMAWIDLGITPGMFRTQLLADTDVSHA 293 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 GL+KAPF A I ++ +G V ++ SLG + VVQ+I +VI++D+LF+IF+ Sbjct: 294 IIGLVKAPFFAVIIAVIGCHQGMQVSGNAESLGSHTSRSVVQAIFLVIVVDALFSIFFAV 353 Query: 371 IGI 373 G+ Sbjct: 354 WGL 356 >gi|123441584|ref|YP_001005570.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088545|emb|CAL11339.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 381 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W + V ++ Q S + DL+ + +DT GA L+ + Sbjct: 21 VSIKGDWVLAHYRVLEPVVTQ--FRASQPQSVVFDLTQLGALDTAGATLLALLLGDERIN 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + E+ +L+ R + + + G+ + D S Sbjct: 79 HLRELAPKLPEERRTLLETVSRVLPDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSL 138 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA Sbjct: 139 LGFVGLTLEALFSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGAT 196 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+G Sbjct: 197 VLTTFGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLG 256 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L+ V +L+ PR+ AL+ISLP+LT + I G +V DI +F S ++ L Sbjct: 257 LNPVELLVLPRVLALLISLPMLTFIGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQ 316 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ Sbjct: 317 HFLVGISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFF 376 Query: 369 FAIG 372 +G Sbjct: 377 MEMG 380 >gi|238764189|ref|ZP_04625142.1| ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] gi|238697602|gb|EEP90366.1| ABC transporter, permease protein [Yersinia kristensenii ATCC 33638] Length = 381 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 4/360 (1%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G+W ++ V ++ S + DL+ + +DT GA L+ + + Sbjct: 25 GDWVLAHYRDLEPVVAQ--FRTNPPPSVVFDLNQLGALDTAGATLLALLLGESRINNLRD 82 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 E+ L+ R + L + G+ + D S + Sbjct: 83 LAPKLPEERRILLETVSRVLPDLTAASSEKLPPFWLELLANTGRSVDNLWQDIKSLLGFV 142 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 GL + +++ SLI + +G++ VP+++L++F+ GAVIA GA L+ Sbjct: 143 GLTLEALFSTIFRPSRWRM--TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTT 200 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA IF++DL+ LRE VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V Sbjct: 201 FGAGIFTVDLVVFSFLREFAVLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPV 260 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 +L+ PR+ AL++SLP+LT + I G +V DI +F S ++ L + Sbjct: 261 ELLVLPRVLALLVSLPMLTFIGMVCGIFGGMVVCALTLDISPTMFLSIMQNSNGLQHFLV 320 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ KAP A I I+ EGF V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 321 GISKAPIFAFLIAIIGCLEGFKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 380 >gi|240137395|ref|YP_002961866.1| putative ABC transporter, permease [Methylobacterium extorquens AM1] gi|240007363|gb|ACS38589.1| Putative ABC transporter, permease [Methylobacterium extorquens AM1] Length = 382 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 135/373 (36%), Positives = 205/373 (54%), Gaps = 12/373 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G G W + + + I ++ +VDLS + +DT+GA ++ Sbjct: 18 DAGGGRVILHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTR 76 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E G++ G L + + +P N G+++ Sbjct: 77 AEIEAAGGRLAYAGARPEHRILLGEMGL------REPEPVPQDTRNPALRFLDTTGQRVA 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + N+ S LG V++ G F+ +L+ Q+ V + GVP+++LISF+ G Sbjct: 131 RGGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLVG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ E Sbjct: 189 GIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMRE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F + Sbjct: 249 EVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLA 308 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI+ Sbjct: 309 RLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIV 368 Query: 360 IDSLFAIFYFAIG 372 +D LFA+F+ AI Sbjct: 369 LDGLFAVFFAAID 381 >gi|198282934|ref|YP_002219255.1| hypothetical protein Lferr_0798 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665617|ref|YP_002425137.1| ABC transporter, permease protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247455|gb|ACH83048.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517830|gb|ACK78416.1| ABC transporter, permease protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 378 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 172/371 (46%), Gaps = 17/371 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G R +G W + A+ S DLSA+ +D+ GA L+ Sbjct: 23 DDG--TLRLSGRWTLRRLGGRFAAQEAALRNI--SPEVCWDLSAVEVLDSAGALLLWRAW 78 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + L +Q S+ + + +P+ + +G +++ Sbjct: 79 GNH-----LPNNIRMADQHHSIFARLADIQPVAARPRHPWH------FLDQLGAFLIETG 127 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D ++G ++ G F + + G + +P++ LI F+ G VI Sbjct: 128 RDLWGLFLLMGALLLEFGRGLRHPRSFP--WREISATIVNTGPNSLPILTLIGFLIGVVI 185 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q A L+Q+GA I+ I++ + LRE G L+TA++++GRSGSA A+IG M + EE+D Sbjct: 186 SFQSASTLAQYGANIYIINIAGLSILREFGPLITAIILSGRSGSAFTAQIGGMCVTEELD 245 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT G+ +R LI P++ L + +PLL + + + GA +V I F + Sbjct: 246 ALRTFGIPPIRRLILPKVIGLALVMPLLVLWTDMVGLYGAMLVAKLELGISNRFFIQQMP 305 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 N++ G++K I +A G V ++ SL ++ T VV SI+++I+ID+ Sbjct: 306 VVVPSFNLWLGVVKGALFGILIAWIAGFHGLKVKPNTTSLSRETTNSVVMSITVMILIDA 365 Query: 363 LFAIFYFAIGI 373 + A+ + GI Sbjct: 366 ILALVFANTGI 376 >gi|218528881|ref|YP_002419697.1| hypothetical protein Mchl_0851 [Methylobacterium chloromethanicum CM4] gi|218521184|gb|ACK81769.1| protein of unknown function DUF140 [Methylobacterium chloromethanicum CM4] Length = 381 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 204/372 (54%), Gaps = 12/372 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62 + G W + + + I ++ +VDLS + +DT+GA ++ Sbjct: 18 DAGGRVILHGRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERTRA 76 Query: 63 --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 E G++ G L + + +P N G+++ + Sbjct: 77 EIEAAGGRLAYAGARPEHRILLGEMGL------REPEPVPQDTRNPVLRFLDTTGQRVAR 130 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 N+ S LG V++ G F+ +L+ Q+ V + GVP+++LISF+ G Sbjct: 131 GGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLVGG 188 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ EE Sbjct: 189 IVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMREE 248 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F +R Sbjct: 249 VDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFLAR 308 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI++ Sbjct: 309 LQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVIVL 368 Query: 361 DSLFAIFYFAIG 372 D LFA+F+ AI Sbjct: 369 DGLFAVFFAAID 380 >gi|254719095|ref|ZP_05180906.1| Sulfate transporter/antisigma-factor [Brucella sp. 83/13] gi|265984086|ref|ZP_06096821.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306838379|ref|ZP_07471224.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653] gi|264662678|gb|EEZ32939.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306406519|gb|EFM62753.1| Sulfate transporter/antisigma-factor [Brucella sp. NF 2653] Length = 391 Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 153/369 (41%), Positives = 216/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FG EIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGTEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|317182671|dbj|BAJ60455.1| hypothetical protein HPF57_1381 [Helicobacter pylori F57] Length = 377 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|16126557|ref|NP_421121.1| ABC transporter permease [Caulobacter crescentus CB15] gi|221235339|ref|YP_002517776.1| ABC transporter permease protein [Caulobacter crescentus NA1000] gi|13423841|gb|AAK24289.1| ABC transporter, permease protein, putative [Caulobacter crescentus CB15] gi|220964512|gb|ACL95868.1| ABC transporter permease protein [Caulobacter crescentus NA1000] Length = 371 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 110/371 (29%), Positives = 187/371 (50%), Gaps = 11/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G V AG+W + + + + A+ DL+ + DT GA I+ Sbjct: 12 QDGGLVAVLAGDWTARGLFDAGPRLTEALEDR---RDLRFDLTGVNRCDTAGAYAILRAA 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K + +L L+ + + PQR+ F L IG+ + Sbjct: 69 GD-RLKSDRIIARKQVLRLLELVGAAIKVE-----PQRAARPTGFYALLERIGRGVFGLF 122 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D LG ++ G S ++ + ++ G+ +P++ +F GAV+ Sbjct: 123 ADGYGTLVFLGHLLVALGRSIVSPHRIR--WAPIVALCERAGLDAMPIIATTTFFIGAVV 180 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L+ FGA++++++L+ I +RE +L+TA+++AGRS S+ AEIGSMK+N+EID Sbjct: 181 ALLGANMLTDFGAQVYAVELIGISVMREFNILITAILLAGRSASSFAAEIGSMKMNQEID 240 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MG+D L+ PR AL++++PLLT +A + + G +V+W D+ F R Sbjct: 241 AMQVMGVDPYEALVLPRFAALLLTIPLLTFVATIAGLAGGILVVWSVLDLSPTFFLQRIV 300 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + GL KAP MA I + ++G VG SLG++VT VV +I +I+ID+ Sbjct: 301 DYVGATHFWIGLSKAPVMAMVIAAIGCRQGMEVGKDIESLGRRVTAAVVHAIFAIILIDA 360 Query: 363 LFAIFYFAIGI 373 +FA+ Y + I Sbjct: 361 VFALIYMELDI 371 >gi|317014880|gb|ADU82316.1| hypothetical protein HPGAM_07715 [Helicobacter pylori Gambia94/24] Length = 377 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGPLKVDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKYEL---MITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|217978940|ref|YP_002363087.1| protein of unknown function DUF140 [Methylocella silvestris BL2] gi|217504316|gb|ACK51725.1| protein of unknown function DUF140 [Methylocella silvestris BL2] Length = 379 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 6/370 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE G+ + AG+W ++I + + + AI DL+ + +DT GA LI Sbjct: 14 SEEGVR-LKLAGHWTLDACADIEEGAQALVGAGAGAKHAIFDLAGVQRMDTAGAWLIDGA 72 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ K + ++ L+ H + + ++ F+ L +G+ +V Sbjct: 73 RQQLDAKGVSADFAGGRPEIDILLKEAHFRSFEQPPGRKGFY---IVTLLADVGESVVAS 129 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D LG V+++ G+ F+G +L+ Q+ + + GVP+++LI+F+ GA+ Sbjct: 130 GRDIYRGVEFLGEVVASIGKSVIQPAHFRG--TALVAQIETIALRGVPIIVLINFLVGAI 187 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +AQQG FQL +FGA I +DL+ IL LRE+GVLLTA+MI+GRSGSAI AE+GSMK+ EEI Sbjct: 188 VAQQGIFQLRRFGATILVVDLIGILILRELGVLLTAIMISGRSGSAITAELGSMKMREEI 247 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MGL + +LI+PRI ALI+SLPLLT LA+ +A+ G +V W Y I F + Sbjct: 248 DALVVMGLRPIDVLIAPRILALILSLPLLTFLADMAALAGGILVSWLYGGITPKSFIALL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +GLIKAPFM IG++A EG AV + SLG++VT VV+SI +VI++D Sbjct: 308 PEAIALRTFLSGLIKAPFMGLIIGLIACMEGLAVAGSAESLGRQVTASVVKSIFMVIVVD 367 Query: 362 SLFAIFYFAI 371 LFA+F+ I Sbjct: 368 GLFAVFFATI 377 >gi|315585855|gb|ADU40236.1| ABC superfamily ATP binding cassette transporter permease protein [Helicobacter pylori 35A] Length = 377 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|308062730|gb|ADO04618.1| putative ABC transport system permease protein [Helicobacter pylori Cuz20] Length = 377 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 107/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + S Y + +GK IVK Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKRYEL---MITKLGKSIVKTY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|264676422|ref|YP_003276328.1| inner membrane ABC-transporter component [Comamonas testosteroni CNB-2] gi|299533747|ref|ZP_07047119.1| putative ABC transporter, permease protein [Comamonas testosteroni S44] gi|262206934|gb|ACY31032.1| putative inner membrane ABC-transporter component [Comamonas testosteroni CNB-2] gi|298718296|gb|EFI59281.1| putative ABC transporter, permease protein [Comamonas testosteroni S44] Length = 375 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 10/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G AG W + E+ + +A A DL + D IGA+L+ Sbjct: 14 SREGQQWAVPAGRWSAAELGDRHIWRRLAPQIRAVPKGAAWDLQQMVWFDHIGAQLLWEQ 73 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 K L + S R ++ P+ + + +G+ ++ Sbjct: 74 WGKAWPAQLLTTKTQR--------SMLERVARFSEVPESKPEPSGWMCEVNRLGQMVIDA 125 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + ++G ++ + + +G + +Y G + +P+ L+ F+ G V Sbjct: 126 CGHFSNLIQLVGQLLLDCLRLLRNP--LRGPWRDISGHLYATGATALPITALVGFLIGVV 183 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A A QL QFGAE F ++++ I +RE+G LL A+++AGRSGSAI A+IG M++ EE+ Sbjct: 184 LAYLMALQLRQFGAESFIVNILGISLIRELGPLLAAILVAGRSGSAITAQIGVMRVTEEL 243 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+ L+ PR AL +S+PL+ + +A+ G + DI + F Sbjct: 244 DAMQVMGISQGYRLVLPRALALAVSMPLVALWTILAALAGGMVAADLTMDITPSYFVQSL 303 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + N+ + K+ I ++ G V ++ SLG+ T VV SI++VII+D Sbjct: 304 PAAVKVGNLVLAMGKSVVFGVLIALIGCHWGLKVEPNTQSLGRGTTAAVVSSITMVIIVD 363 Query: 362 SLFAIFYFAIG 372 ++FAI + +G Sbjct: 364 AIFAILFRNVG 374 >gi|261840140|gb|ACX99905.1| hypothetical protein HPKB_1368 [Helicobacter pylori 52] Length = 377 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +P+ IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPISILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|34558310|ref|NP_908125.1| toluene ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34484029|emb|CAE11025.1| conserved hypothetical protein-ABC-type toluene export system, permease component [Wolinella succinogenes] Length = 366 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 102/368 (27%), Positives = 182/368 (49%), Gaps = 16/368 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---ME 63 G W E+ + +A + S V L ++ +D A L++ ++ Sbjct: 10 LRLILRGQWDYELPKELISRLFLACKRD--SVRVSVSLLGVSSLDYSAATLLLELSMAVK 67 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + G+ +GV I + ++ + R S +G+KI + + Sbjct: 68 RRGGEWAWEGVPPAIAPILGIVKESKRDLPAPPPSLSS---------LLRLGEKIKESLK 118 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 A LG + G S + L + + + G+ VP++ L SF+ G V+A Sbjct: 119 GLGRFASFLGETLFAMGRSLKESRLIR--LKATLYHIEESGIKAVPIIALTSFLVGIVMA 176 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QGA QL +FGA I +++ +L LRE+G ++ A+++AGRS S+ A+IG MKI EEIDA Sbjct: 177 YQGAIQLEKFGASIIVVEMTGMLTLRELGPVIAAIVVAGRSASSYAAQIGVMKITEEIDA 236 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TM + L+ PR+ AL++ +PL+ L+N + ++G ++I Y I + + RF+ Sbjct: 237 MKTMNFNPYAFLVIPRVIALVVVMPLVIFLSNVAGLLGEMLIIKSYLGIGYLQYIERFYE 296 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + +++ GLIKAPF I ++ GF + + S+G+ T VV +I VI ++++ Sbjct: 297 MVEIRHLWVGLIKAPFYGAIIALIGCFRGFQITGSTESVGRYTTISVVNAIFWVIALNAM 356 Query: 364 FAIFYFAI 371 F+I + Sbjct: 357 FSIIFTEY 364 >gi|304391808|ref|ZP_07373750.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] gi|303296037|gb|EFL90395.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130] Length = 385 Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats. Identities = 133/370 (35%), Positives = 211/370 (57%), Gaps = 7/370 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ V +G W I E+ DD+ S +++ +A T++DT GA LI Sbjct: 21 NTDGVLV-TASGPWTIAFIEEVDDDIRA--FSIEGSAKLVLNTTAATQLDTSGAWLIERL 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + L+ HR++ + S++ +G+ ++F Sbjct: 78 RQRVEEAGIAFSHEDDEPRRQQLVDVIHRRE--RPETDAPTQTKSWRGPIVRLGEIGIEF 135 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D + +ILG + S + S++ Q+ +G VPVV ++SF+ GA+ Sbjct: 136 GRDLMTALYILGSSVRGPSSNGGSGRGLRVM--SILNQIDQMGWRAVPVVFVMSFLIGAI 193 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGA+Q+ +G E+ +I L+ IL RE+GVLLT++M+AGRSGSAI AEIG+MK+ EEI Sbjct: 194 IAQQGAYQMQAYGEELLAISLVGILHFREVGVLLTSIMVAGRSGSAITAEIGTMKMREEI 253 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL+ V +L+ PR+ A++I LP+LT+L+N + I+GA +V+ Y I + F + Sbjct: 254 DALQVMGLNPVGVLLFPRLLAIMICLPILTLLSNIAGIMGAMVVMDIYVGITPSQFITTL 313 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ GL KAP MA IG+VA EG VG S SLG++ T VV+SI +VI++D Sbjct: 314 TEDISPRHLAVGLAKAPVMALIIGLVAAVEGLKVGGSSESLGQRTTAAVVKSIFLVIVVD 373 Query: 362 SLFAIFYFAI 371 LF IF+ A+ Sbjct: 374 GLFTIFFSAM 383 >gi|113866165|ref|YP_724654.1| putative uncharacterized transport protein [Ralstonia eutropha H16] gi|113524941|emb|CAJ91286.1| putative uncharacterized transport protein [Ralstonia eutropha H16] Length = 378 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 167/373 (44%), Gaps = 14/373 (3%) Query: 4 NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMY 60 +G G+W + ++ A + +++ Q+ DSA L+ + +D IG +L+ Sbjct: 17 DGTVSVALRGDWTALALAGCHQARQLRAQLHELAQAPDSAQWSLAGVERLDHIGGQLLWQ 76 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 G + Q N G ++ Sbjct: 77 AWN---------GALPQRLDASEGQRRVFERIAAVQNEGWKKHMVDRFNPITLFGANVLS 127 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F S +LG + + F +G + +Y VG + + L+ F+ G Sbjct: 128 FGAQLRSGITMLGQLAFDLLRFAGVPQ--RGPWREISANIYNVGYKALGITALVGFLIGI 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ A QL FGA F ++++ + +RE+G +L A++IAGRSGSAI A+IG M++ EE Sbjct: 186 VLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ LI PR+ AL I++PLL + A+ G + I F Sbjct: 246 LDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLRE 305 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +AN++ GL K I + A G + ++ SLG+ T VV +I+IVI+ Sbjct: 306 LPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVILA 365 Query: 361 DSLFAIFYFAIGI 373 D++FA+ + +G+ Sbjct: 366 DAVFAVLFKDVGL 378 >gi|115353001|ref|YP_774840.1| hypothetical protein Bamb_2950 [Burkholderia ambifaria AMMD] gi|115282989|gb|ABI88506.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD] Length = 374 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + Sbjct: 19 TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALWRVWGR--- 75 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 KL ++ R + + P+R + L G + F Sbjct: 76 --KLPDGVALSPTQRTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|261838741|gb|ACX98507.1| ABC transport system permease [Helicobacter pylori 51] Length = 377 Score = 252 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGADSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|188590871|ref|YP_001795471.1| hypothetical protein RALTA_A0076 [Cupriavidus taiwanensis LMG 19424] gi|170937765|emb|CAP62749.1| conserved hypothetical protein, DUF140; putative TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 376 Score = 252 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 96/373 (25%), Positives = 168/373 (45%), Gaps = 14/373 (3%) Query: 4 NGITVFRFAGNWKSPEIS--EIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMY 60 +G + G+W + ++ A + +++ Q+ A L+ + +D IG +L+ Sbjct: 15 DGTVSVQLRGDWTALALAGCHQARQLRAQLHELAQAPDHAQWSLAGVERLDHIGGQLLWQ 74 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 G + + Q N +G ++ Sbjct: 75 AWN---------GALPQRLEASEGQRRVFARIAAVQDEGWKKHMVDRFNPVTLLGANVMS 125 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + +LG + + F +G + +Y VG + + L+ F+ G Sbjct: 126 FGVQLGNGITMLGQLAFDLLRFARMPQ--RGPWREISANIYNVGYKALGITALVGFLIGI 183 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ A QL FGA F ++++ + +RE+G +L A++IAGRSGSAI A+IG M++ EE Sbjct: 184 VLSYLSANQLRTFGASTFIVNILGMAVIRELGPVLAAILIAGRSGSAITAQIGVMRVTEE 243 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ LI PR+ AL I++PLL + A+ G + I F Sbjct: 244 LDAMRVMGISHGFRLIMPRVIALAIAMPLLVAWTDVMALAGGMLAARMQLGISATFFLRE 303 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +AN++ GL K I + A G + ++ SLG+ T VV +I+IVI+ Sbjct: 304 LPDAVPVANLWLGLGKGVVFGILIALTACHFGLRIKPNTQSLGEGTTASVVTAITIVILA 363 Query: 361 DSLFAIFYFAIGI 373 D++FAI + +G+ Sbjct: 364 DAVFAILFKDVGL 376 >gi|308185234|ref|YP_003929367.1| putative ABC transport system permease protein [Helicobacter pylori SJM180] gi|308061154|gb|ADO03050.1| putative ABC transport system permease protein [Helicobacter pylori SJM180] Length = 377 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + S Y L +GK +V+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKASKQYEL---LITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|188528238|ref|YP_001910925.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470] gi|188144478|gb|ACD48895.1| hypothetical protein HPSH_07510 [Helicobacter pylori Shi470] gi|308064225|gb|ADO06112.1| putative ABC transport system permease protein [Helicobacter pylori Sat464] Length = 377 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKRYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|311694463|gb|ADP97336.1| ABC transporter, permease protein [marine bacterium HP15] Length = 388 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 105/365 (28%), Positives = 186/365 (50%), Gaps = 5/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+W ++ ++ + ++LS +T IDT GA + + Sbjct: 28 TLSVNGDWLLSHYRSLSSLASSMSSRDLI--KLSINLSGLTRIDTAGASQLASLIGPERL 85 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 S + +LI+ +KNQ + + G+K+ Sbjct: 86 LEAASADSELPRETSALIAAVCEA-MKNQPEADRRSPSLVWSFVTGTGQKVESIFRLLWI 144 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + ++++ + ++ G++ +P+V L++F+ GAV+A GA Sbjct: 145 LVGFIGQTLGTLAWNLPRPWRWRM--TPFVAAVHDTGLNALPIVALLTFLVGAVVAFLGA 202 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGA I++++L++ LRE GVLL A+++AGR+ SA A IG+MK+NEE+DAIRT+ Sbjct: 203 TVLDDFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASAFTAHIGAMKVNEELDAIRTL 262 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ + +L+ PR+ A+++SLP+LT + S ++G ++V DI F + L Sbjct: 263 GLNPIELLVLPRVMAMMVSLPILTFVGMISGMVGGAMVCALVLDITPTQFMAIVERDIAL 322 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G++KAP A I ++ EGF V + S+G+ T+ VVQSI +VI++DS+ A+F Sbjct: 323 QHFVVGIVKAPIFAFLIAVIGCLEGFKVAGSAQSVGEHTTSSVVQSIFMVILLDSIAALF 382 Query: 368 YFAIG 372 + +G Sbjct: 383 FMEMG 387 >gi|317179642|dbj|BAJ57430.1| hypothetical protein HPF30_1333 [Helicobacter pylori F30] Length = 377 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 KERSLDIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|119897565|ref|YP_932778.1| putative ABC transporter permease [Azoarcus sp. BH72] gi|119669978|emb|CAL93891.1| putative ABC transporter permease protein [Azoarcus sp. BH72] Length = 380 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 124/372 (33%), Positives = 199/372 (53%), Gaps = 5/372 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ G V R +G+W IAD V VD S + +DT GA L++ Sbjct: 13 LAAAGGGVLRLSGDWTLAHYRSIADTVSALRANVQHG--TAVDASGLGALDTAGASLLVQ 70 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + + G L + +L+ +P+ + ++ ++ HIG + Sbjct: 71 LLG-HDGLQALSTDPALAPERRALLRAVADALATPPEPEPADTGSALGDVLEHIGIAMGV 129 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + +GL + + A +++ L +L + + VP+V L++F+ GA Sbjct: 130 FWRHAVGLLGFIGLTLESAFRIIAQPARWR--LTALAANLEKTALDAVPIVALLTFLVGA 187 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A GA L+ FGA IF++DL++ LRE GVLLTA+++AGR+ SA A+IGSMK NEE Sbjct: 188 VVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILVAGRTASAFTAQIGSMKANEE 247 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIR +GLD V +L+ PR++AL+++LP+LT +A S I+G +V DI +F S Sbjct: 248 IDAIRVLGLDPVELLVLPRVYALLLALPMLTFVAMLSGIVGGMLVCALTLDISPVMFLSI 307 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + L + G+ KAP A I ++ EGF V + S+G+ T+ VVQSI +VI++ Sbjct: 308 FENDVGLRHFIVGIAKAPIFAFLIAVIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVIVV 367 Query: 361 DSLFAIFYFAIG 372 D++ A+ +G Sbjct: 368 DAVAALLCMELG 379 >gi|163850324|ref|YP_001638367.1| hypothetical protein Mext_0891 [Methylobacterium extorquens PA1] gi|254559575|ref|YP_003066670.1| ABC transporter permease [Methylobacterium extorquens DM4] gi|163661929|gb|ABY29296.1| protein of unknown function DUF140 [Methylobacterium extorquens PA1] gi|254266853|emb|CAX22652.1| Putative ABC transporter, permease [Methylobacterium extorquens DM4] Length = 382 Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats. Identities = 135/374 (36%), Positives = 206/374 (55%), Gaps = 14/374 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G + G W + + + I ++ +VDLS + +DT+GA ++ Sbjct: 19 AAGGRVILH--GRWTADQ-GPAVESASARIAAQGRTQPVLVDLSGLARLDTLGAWVLERT 75 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 E G++ G L + + +P N G+++ Sbjct: 76 RAEIEAAGGRLAYAGARPEHRILLGEMGL------REPEPVPQDTRNPALRFLDTTGQRV 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + N+ S LG V++ G F+ +L+ Q+ V + GVP+++LISF+ Sbjct: 130 ARGGNEILSGIAFLGEVVAAGGRVARRPQTFRM--AALVNQLEQVALRGVPIIVLISFLV 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++AQQG FQL +FGA+ F ++L+ +L LRE+GVLLT++M+AGRSGSA AEIGSM++ Sbjct: 188 GGIVAQQGIFQLQRFGAQSFVVNLIGLLILRELGVLLTSIMVAGRSGSAFTAEIGSMRMR 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+R MGLD + ILI PRI AL+I LP+L L + +A+ G + Y + F Sbjct: 248 EEVDALRVMGLDPIEILILPRILALVIGLPILAFLGSLAALAGGGLTAAIYGGMTTDAFL 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +R + + + GLIKAPFMA IGI+A EGFAV + SLG+ VT VV+SI +VI Sbjct: 308 ARLQAAVSFHHFAVGLIKAPFMALTIGIIATIEGFAVEGSAESLGRHVTASVVKSIFMVI 367 Query: 359 IIDSLFAIFYFAIG 372 ++D LFA+F+ AI Sbjct: 368 VLDGLFAVFFAAID 381 >gi|283957032|ref|ZP_06374504.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 1336] gi|283791533|gb|EFC30330.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 1336] Length = 369 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 186/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL+KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSAGI 369 >gi|285019443|ref|YP_003377154.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283474661|emb|CBA17160.1| probable abc transporter permease protein [Xanthomonas albilineans] Length = 405 Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 117/366 (31%), Positives = 193/366 (52%), Gaps = 13/366 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + R G+W V + +S+ + + +D S I ++D+ G ++ + + Sbjct: 52 SRVRLTGSWTLSTAL-----VASEVLRSMPAGTTGIDASGIAQLDSAGVLQLIRYATRNG 106 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + L S I + K + F +G + + + Sbjct: 107 IAQESLDFRQDHRALVSTIEDVADDRPKRK------RDYGFAAALERLGYTVHRNGKEIV 160 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + LG + + +F+ L S + M VG+ VP+V L+S++ GAVIA G Sbjct: 161 ALVGFLGETLVKLMRLMHAPRRFR--LTSTVHHMEQVGLDAVPLVALLSYLVGAVIAFLG 218 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + L FGAEI+ ++L+SI LRE VLLTA+++AGR+ SA A+IG+MK EEIDAI+T Sbjct: 219 STVLRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAIQT 278 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL++ LPLLT +A + + G V IP ++ +R H T Sbjct: 279 LGLDPMDLLVIPRLLALLLMLPLLTFVAMIAGLAGGVTVGAFDLGIPPQMYLARMHDTIQ 338 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++ GL KAP A AIG++ EG V + S+G++ T+ VVQ+IS+VIIID++ A+ Sbjct: 339 IRHMLVGLAKAPIFAIAIGLIGCLEGLRVEGTAQSVGERTTSSVVQTISLVIIIDAIAAL 398 Query: 367 FYFAIG 372 ++ +G Sbjct: 399 WFMKMG 404 >gi|182680400|ref|YP_001834546.1| hypothetical protein Bind_3500 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636283|gb|ACB97057.1| protein of unknown function DUF140 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats. Identities = 122/371 (32%), Positives = 205/371 (55%), Gaps = 6/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G+W + + + ++ + + + + VD+ + EIDT GA L+ + Sbjct: 12 RGETLNVIATGSWIGAHAAAL-EPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLI 70 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + + K ++ ++ L++ + + G+ + Sbjct: 71 QSWKAEGKETTITGLSDRFGDLVAEVDHVSRSMSQAAAKRTS---LDSLRAFGRAAMDLW 127 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D+ + +LG +++ K + SL+ Q+ VG+ VP+++LI+F+ G +I Sbjct: 128 LDTRNFLVVLGRLVAVFLVVLRHPKKMR--FTSLVAQLDRVGLQAVPIILLITFLIGGII 185 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQG F +FGA+ + +DL++ L LRE+GVL+ A+M+AGRSGS+ AEIGSMK+ EEID Sbjct: 186 AQQGLFNFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKMREEID 245 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RTMGLD V +L+ PR+ AL+++LP+LT L +A+ G +V W Y + +F R Sbjct: 246 ALRTMGLDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIR 305 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 A+L GLIKAPFMA IG++A EG AV + SLG + T+ VV+SI ++I++D Sbjct: 306 DAASLTQFEVGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDG 365 Query: 363 LFAIFYFAIGI 373 + +F+ A G+ Sbjct: 366 ILDLFFAATGM 376 >gi|114707109|ref|ZP_01440007.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506] gi|114537305|gb|EAU40431.1| permease of ABC transporter [Fulvimarina pelagi HTCC2506] Length = 394 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 139/371 (37%), Positives = 220/371 (59%), Gaps = 3/371 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G V AG+W + I I D+ + +D +DLS + +IDT GA ++ Sbjct: 27 RGGTLVLEAAGDWLARTIGSIESDLERTARADLGAD-VAMDLSRVGQIDTAGAFVLERLK 85 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K + V E+ +L + + + ++ N +G ++ Sbjct: 86 RDLRAKREHVEVEGLAERNTALFAAVGSAMDRERPVRQRERSKILTNAVIAVGSFVIGIK 145 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ + +++G + G + + + ++ Q+ +GV +P+++LI+F+ G +I Sbjct: 146 DELVNGLNLIGGAMYGAGSRISGRTQSRP--AAIFNQIDQMGVKAIPIIVLITFLVGGII 203 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL ++G E+++++L+SIL LREIGVLL A+MIAGRSGSAI AEIGSMK+ EE+D Sbjct: 204 AQQGAFQLRRYGGEVYAVNLISILVLREIGVLLAAIMIAGRSGSAICAEIGSMKMREEVD 263 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ + +L+ PR+ AL I+LPLLT++AN +A++G +I + Y DI F F Sbjct: 264 ALHVIGLNPIGVLVFPRLVALSIALPLLTVIANLAALVGGAITLRIYSDISFLNFLQGLQ 323 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L +F+GL+KAPFMA IG+VA EG VG + SLG +VT VV+SI +VI++D Sbjct: 324 QSIDLFTVFSGLLKAPFMAILIGLVAANEGMKVGGSAESLGLRVTAAVVKSIFLVIVMDG 383 Query: 363 LFAIFYFAIGI 373 LFAIFY +IG+ Sbjct: 384 LFAIFYASIGL 394 >gi|307638119|gb|ADN80569.1| organic solvent resistant ABC transporter [Helicobacter pylori 908] gi|325996719|gb|ADZ52124.1| putative ABC transport system, permease protein [Helicobacter pylori 2018] Length = 377 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKYEL---MITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|172061853|ref|YP_001809505.1| hypothetical protein BamMC406_2812 [Burkholderia ambifaria MC40-6] gi|171994370|gb|ACB65289.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6] Length = 374 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V + + DLS I +D +G + + + Sbjct: 19 TVRLYGQWTALALARNRGAVARRVAGIASGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R + L G + F Sbjct: 79 DGVALSTTQ-----RTIFERIERLDSQREAPERVVHFGPITRL----GFMLFAFAEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + GLVI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGLVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQTFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDINYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIM 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|160872209|ref|ZP_02062341.1| ABC transporter, permease [Rickettsiella grylli] gi|159121008|gb|EDP46346.1| ABC transporter, permease [Rickettsiella grylli] Length = 375 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 112/376 (29%), Positives = 194/376 (51%), Gaps = 13/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S+ G G W I + D +N+ I+S I++ + IT++D+ GA + Sbjct: 10 LSKQGNHQIDCQGAWTLSGIRKKNLDQSFQKLNRHIESP-LILNAAFITQMDSSGAWQLY 68 Query: 60 YFMEKY--HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + ++ K+ L G+++ + LF +I + + + +GKK Sbjct: 69 QWKKQLAKKRKVHLIGLNSKHQALFGMIETAAEQIKPLPREKT-------FRGLGLLGKK 121 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ N+ S +G + + + +++ + G+ + ++ L+SF+ Sbjct: 122 SIEQWNELKSYLAFIGKNFISACHAFLHPRQLRV--RAILGIIENTGLDALGIIALLSFM 179 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ Q FQL FGA F IDL+ + LRE LLTA+M+AGRSGSA A++G MKI Sbjct: 180 IGIVLTYQMGFQLKNFGATRFIIDLLGLAILREFSPLLTAIMVAGRSGSAFTAQLGMMKI 239 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ TMG+ ++LI PR+W L+++LPLLT+ A+ ++G + +I + F Sbjct: 240 KEEIDALNTMGVLPRQLLILPRLWGLLLALPLLTVWADIFGLLGGMAMTHNMMNISYLDF 299 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 RF +L+++ G+ KAP A I A +G V ++S+G++ T VVQ I + Sbjct: 300 LHRFPKVVSLSSLIIGVGKAPVFALIIASTACFQGLRVSGSADSVGRQTTRSVVQGIFFI 359 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D+LF+I + + I Sbjct: 360 IVADALFSILFSTLNI 375 >gi|86149247|ref|ZP_01067478.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596442|ref|ZP_01099679.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218563235|ref|YP_002345015.1| putative ABC transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840029|gb|EAQ57287.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191283|gb|EAQ95255.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360942|emb|CAL35743.1| putative ABC transport system permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926840|gb|ADC29192.1| putative ABC transport system permease [Campylobacter jejuni subsp. jejuni IA3902] gi|315929480|gb|EFV08676.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 369 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSHQN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG ++ PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSTGI 369 >gi|15598407|ref|NP_251901.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9949331|gb|AAG06599.1|AE004744_14 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 381 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 112/366 (30%), Positives = 183/366 (50%), Gaps = 4/366 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G+W + + +V +S + + DLS + +DT GA L+ + Sbjct: 19 ARVRAIGDWTLAHYTALEREVTRL--RSEVAANVSFDLSQLGALDTAGAALLAELLGAER 76 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + +L+ +P++ + L IG + F Sbjct: 77 LADLAELEPGLPRERQALLKTVGHALHDFCEPEKPKPPTTAIELLARIGCAMETFWLHLK 136 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +GL + ++ L+ + G+ VP++ L++F+ GAVIA G Sbjct: 137 ALLGFIGLTLETLFRSLVRPASWRV--TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLG 194 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA I++++L+ LRE VLLTA+++AGR+ SA A+IGSMK NEEIDAIR Sbjct: 195 ATVLANFGATIYTVNLVVFSFLREFAVLLTAILMAGRTASAFTAQIGSMKANEEIDAIRA 254 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ + +L+ PR+ AL++SLP+LT + I+G V DIP A+F S Sbjct: 255 LGLNPIELLVLPRVLALLVSLPMLTFVGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIG 314 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + G+ KAP A I ++ EGF V + S+G+ TT VV SI +VI++D+L A+ Sbjct: 315 VQHFLVGISKAPLFAFLIAVIGCLEGFKVSGSAQSVGEHTTTSVVHSIFVVILLDALAAL 374 Query: 367 FYFAIG 372 + +G Sbjct: 375 LFMEMG 380 >gi|254458263|ref|ZP_05071689.1| stas domain protein [Campylobacterales bacterium GD 1] gi|207085099|gb|EDZ62385.1| stas domain protein [Campylobacterales bacterium GD 1] Length = 357 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 102/365 (27%), Positives = 174/365 (47%), Gaps = 8/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +F+G + ++ + + + DL + DT + I + K K Sbjct: 1 MKFSGEFTLYTVTSYQNKIDEIDFSQV--RKVDFDLEDVVYFDTAASIFINSLIHKLTQK 58 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + T + + + + K +Q N IG+ + + + Sbjct: 59 NITSNIITTNKDILDTLELVLKSKKTSQAIPEETRP----NFLNIIGENTYLYYSGFVAF 114 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + + ++ + + ++ L SF+ G V+A Q A+ Sbjct: 115 MAFIGQLFATKINTLKTIKNIR--FKEIAFEINESAIKALGIISLTSFLIGLVVAYQSAY 172 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL +GA IF +D++ I LRE+ L+TA++IAGRSGSA A+IG+MKI EE+DA+RTMG Sbjct: 173 QLKIYGANIFIVDMLGISMLRELAPLMTAIVIAGRSGSAFTAQIGAMKITEELDAMRTMG 232 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D L+ PRI AL+I++P+L +A+ ++ G +V DI +F RF+ Sbjct: 233 FDPYIFLVLPRIIALMIAMPILIFVADIMSVFGGLLVAVIDLDISPQLFIDRFNDVVAAK 292 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + F G+ K PF A I + + G V + S+G T VV+SI VII D++F+I + Sbjct: 293 HFFIGIGKGPFFAFIIASIGVYRGLEVKDDTQSIGFNTTKSVVESIFAVIICDAIFSILF 352 Query: 369 FAIGI 373 +GI Sbjct: 353 TNLGI 357 >gi|159184854|ref|NP_354638.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|159140135|gb|AAK87423.2| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 386 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 157/370 (42%), Positives = 223/370 (60%), Gaps = 6/370 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G + + +G+W++ +S I + + I KS + +DLSA+ IDT GA +I Sbjct: 22 SGGGSRYVLSGSWRNSNLSGIFESLDR-IEKSKPASPVDIDLSAVEAIDTTGAWIIQRLR 80 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ + + + ++ + + + IG+ +V+ Sbjct: 81 KDLEASGATVTLTGNDRIEDVIGQLPDKAEMDVEPVA---REGLVERIFAPIGQAVVQNG 137 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D + +ILG + +++ Q+ ++GV VP+++L+SF+ GA+I Sbjct: 138 ADFLAGMYILGSAVRGAQMKLGRGRGVSP--AAIVNQIDHMGVRAVPIIMLMSFLIGAII 195 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 255 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV Y I F VF SR H Sbjct: 256 ALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVALAYSGITFEVFLSRLH 315 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + I G+IKAPFMA IGIVA EG VG + SLGK VT+ VV+SI +VI++D Sbjct: 316 GAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDG 375 Query: 363 LFAIFYFAIG 372 LFAIFY AI Sbjct: 376 LFAIFYAAID 385 >gi|254487283|ref|ZP_05100488.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101] gi|214044152|gb|EEB84790.1| ABC transporter, inner membrane subunit [Roseobacter sp. GAI101] Length = 369 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 129/369 (34%), Positives = 205/369 (55%), Gaps = 8/369 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 T +G+ + + D + + + ++D+S +T IDT GA L++Y ++ Sbjct: 9 DGTRLVVSGDLRIAAV----DALDRSALLKKAAGVTVIDISGLTRIDTAGAWLLVYAQDR 64 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K ++ + LI + + + +G+ + Sbjct: 65 LAAPGKRVEITGTSDAQAQLIDVVRASMPPADIAE--PKPKTLADQVETLGRMVTSGARK 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG V++ +F+ L SL+ VG++ VP+V L+SF+ G V+A Sbjct: 123 TVELTSFLGQVVATMAGTLIHPRRFR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVLAF 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QGA QL QFGAE+F +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EEIDA+ Sbjct: 181 QGAVQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEIDAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+GLD V IL+ PR+ AL++ LP L +LA+ S ++G +++ W + AVF SR Sbjct: 241 RTIGLDPVTILVVPRVLALMLMLPALGLLADISGLVGGAVMSWIELGVSPAVFQSRLVGN 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + G+IKAPF A IGI+ EG VG + SLG+ +T VV SI +VI++D++F Sbjct: 301 TDVWHFGVGMIKAPFFALIIGIIGCYEGMKVGGDAESLGRLTSTSVVLSIFMVIVMDAMF 360 Query: 365 AIFYFAIGI 373 +IF+ +G+ Sbjct: 361 SIFFAIVGV 369 >gi|308183565|ref|YP_003927692.1| putative ABC transport system permease protein [Helicobacter pylori PeCan4] gi|308065750|gb|ADO07642.1| putative ABC transport system permease protein [Helicobacter pylori PeCan4] Length = 377 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|297380678|gb|ADI35565.1| conserved hypothetical protein [Helicobacter pylori v225d] Length = 377 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S VD S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGSLKVDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKRYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|254710104|ref|ZP_05171915.1| Sulfate transporter/antisigma-factor [Brucella pinnipedialis B2/94] gi|261317653|ref|ZP_05956850.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261296876|gb|EEY00373.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] Length = 391 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 3/369 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G+ V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI Sbjct: 24 QDGMRVIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLR 82 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ K + E L+ + R+ F +G ++ Sbjct: 83 QRLAAKHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMF 142 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ND HILG I +++ QM +GV +P+V+L+S + GA+I Sbjct: 143 NDFKMAMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIVVLMSTIVGAII 200 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEIGSMK+ EE D Sbjct: 201 AQQGAFQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEIGSMKMREETD 260 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H Sbjct: 261 ALTVIGLNAVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLH 320 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D Sbjct: 321 DAVALNTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDG 380 Query: 363 LFAIFYFAI 371 LFA+FY AI Sbjct: 381 LFAMFYAAI 389 >gi|163793381|ref|ZP_02187356.1| ABC transporter, inner membrane subunit [alpha proteobacterium BAL199] gi|159181183|gb|EDP65698.1| ABC transporter, inner membrane subunit [alpha proteobacterium BAL199] Length = 391 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 211/375 (56%), Gaps = 12/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G V R G W + + +++ + S VD ++++ +D+ GA +I Sbjct: 26 TRDGTLVVRLRGPWTLQTALSVDAAIRALADRA--AASVTVDATSLSRLDSAGAWVIQRT 83 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 ++ +++ G+ ++ + + + P +S N +G++ Sbjct: 84 VAQFDRRGVPVEIVGLDEGLQAILDKAAEHDQSADIAPAPT-----SSLLNFLERLGRRS 138 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V+ ++ + +LG+V+ +G +G +++ Q+ GV+ +P+V L+ F+ Sbjct: 139 VEGLHTGRNLLGLLGVVVVASGRIVVRPMTLRG--TAVVAQIEATGVTALPIVGLLCFLV 196 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+A GA QL++FGA +++L+ I LREIG+LLTA+++AGRSGSA A+IG+MK+N Sbjct: 197 GVVLAYMGALQLTRFGAANLTVNLVGISVLREIGILLTAIIVAGRSGSAFAAQIGTMKVN 256 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA+ TMGL + +L+ PR+ ALII LP LT+ A+ + ++G ++V D+ F Sbjct: 257 QEIDALETMGLSVIDVLVLPRVIALIIVLPALTVFADVAGLVGGAMVCMFQLDMTIGQFL 316 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + T+ + TGLIKAP A AI +V G V + S+G++ T VV+SI +VI Sbjct: 317 TQLSAGVTVWSFATGLIKAPVFALAIALVGCHSGLGVSGSAESVGRQTTRAVVESIFLVI 376 Query: 359 IIDSLFAIFYFAIGI 373 I++++FAI + IGI Sbjct: 377 ILNAIFAIAFAKIGI 391 >gi|317010161|gb|ADU80741.1| putative ABC transport system permease protein [Helicobacter pylori India7] Length = 377 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESEKAGKKYEL---MITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL + GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQEMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAINYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|86152328|ref|ZP_01070539.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|121613751|ref|YP_001001289.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|167006183|ref|ZP_02271941.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315125046|ref|YP_004067050.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840817|gb|EAQ58068.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|87249848|gb|EAQ72807.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|315018768|gb|ADT66861.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 369 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKEGLNSSFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSAGI 369 >gi|319788025|ref|YP_004147500.1| hypothetical protein Psesu_2437 [Pseudoxanthomonas suwonensis 11-1] gi|317466537|gb|ADV28269.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis 11-1] Length = 371 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 119/364 (32%), Positives = 184/364 (50%), Gaps = 13/364 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W E+A + + I D A VD S + ID+ G + F + Sbjct: 20 VRLQGDWILDHALEMAARL-----REIPGDVASVDASGVGRIDSAGMMQLARFARRRELA 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 S L LI + + + F +G+ + Sbjct: 75 DDALHFSESHLPLVQLIEDVPDDRPRRK------RDYGFAAALERLGRATHTVGRNIVEL 128 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + + L + + M VG+ +P+V L+S++ GAVIA G+ Sbjct: 129 LGFTGENLVKLLRLLRQPRR--FRLTATVSHMEQVGLDALPLVALLSYLVGAVIAFLGST 186 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGAEIF ++L+SI LRE VLLTA+++AGR+ SA A+IGSMK EEIDAIRT+G Sbjct: 187 ILADFGAEIFVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGSMKAREEIDAIRTLG 246 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + +L+ PR+ AL++ LPLLT +A + + G V +IP ++ +R T + Sbjct: 247 LDPIELLVIPRLVALLVMLPLLTFVAMMAGLAGGVTVGAFDLEIPPQMYLARMEETMQVR 306 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+L A+++ Sbjct: 307 HFLVGMSKAPVFAMVIGLIGCLEGMRVQGSAQSVGERTTSSVVQTISLVIIIDALAALWF 366 Query: 369 FAIG 372 +G Sbjct: 367 MNMG 370 >gi|88810292|ref|ZP_01125549.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231] gi|88791922|gb|EAR23032.1| hypothetical protein NB231_14468 [Nitrococcus mobilis Nb-231] Length = 364 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 92/366 (25%), Positives = 181/366 (49%), Gaps = 12/366 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+W ++ + + N + S ++L I+ +DT GA ++ + Sbjct: 10 VICSGDWSVERLAAVERQIRR--NAPMTSGEWRINLGEISTLDTAGAVMVQRLCRRLRTA 67 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + +++ + + S N +G+++ Sbjct: 68 GASVQLEDVSAERHAVLKLVASEMEVTPRRPYS-------NPLERLGRRVTDGCFGITEY 120 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +++ ++ + + ++ GV +P++ L++F+ G V+A Q Sbjct: 121 LAFIGRLTADSLPRMLRPHRLR--WHEIAVELERAGVMAIPIIGLLAFLIGIVMAYQSGD 178 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +GA IF +DL+ ++ LRE+G L+TAV++AGR+G++ A+IG+M + EE+DA+RTMG Sbjct: 179 ILQTYGANIFLVDLLGVIILREMGPLMTAVIVAGRTGASYTAQIGTMHLTEEVDALRTMG 238 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + +L+ P+ AL+I+LPLLT+ A+ ++G +V Y + F VF R + Sbjct: 239 VTPFEMLVLPKFLALLIALPLLTVWADAIGLLGGMLVSSLLYGVDFDVFLRRLPTAVPPN 298 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI-F 367 + G+ KAP A I + +GF + ++ +G+ T VVQ I VI+ D++F+I Sbjct: 299 MFWVGIAKAPVFAALIASIGCYQGFRIRYSADEVGRYTTISVVQGIFWVIVADAVFSIVL 358 Query: 368 YFAIGI 373 + +G+ Sbjct: 359 FSWLGL 364 >gi|57238657|ref|YP_179788.1| ABC transporter, permease protein, putative [Campylobacter jejuni RM1221] gi|57167461|gb|AAW36240.1| ABC transporter, permease protein, putative [Campylobacter jejuni RM1221] gi|315059096|gb|ADT73425.1| Putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni S3] Length = 369 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ ALI+++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALIVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVVLTSAGI 369 >gi|27381005|ref|NP_772534.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354171|dbj|BAC51159.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 127/370 (34%), Positives = 191/370 (51%), Gaps = 5/370 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G W + + V A + S +D+S + ++DT GA LI Sbjct: 3 GNALALCATGTWTASFAPVLERMVADAEKLAGSPQSIFIDVSEVAKLDTFGAWLIERLRR 62 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ SL+ R + P + + IG+ + Sbjct: 63 SLTQGTVEAQIAGLSANYSSLVDEVRRVRAT---PVVDAGTITITGMLDQIGRAVAGVAG 119 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V++ G F+ L S + M V VP+++LI+F+ G +IA Sbjct: 120 TVAGLIDMLGAVLAAGGRVLIHPRSFR--LTSTVHHMEQVCWRAVPIIVLITFLIGCIIA 177 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QQG F +FGA+IF +D++ +L LREIGVLL A+M+AGRSGSA AE+GSMK+ EEIDA Sbjct: 178 QQGIFHFRRFGADIFVVDMLGVLVLREIGVLLVAIMVAGRSGSAYTAELGSMKMREEIDA 237 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RTMG D + +L+ PR+ AL+++LP+L L +A+ G +V W Y + F R Sbjct: 238 LRTMGFDPIEVLVLPRMLALVLALPILAFLGAMAALYGGGLVAWLYGGVDPEAFLLRLRD 297 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ + G++KAP MA IGIVA EG AV + SLG+ T VV+ I VI++D + Sbjct: 298 AISIDHFIVGIVKAPVMAAVIGIVACVEGLAVQGSAESLGQHTTASVVKGIFFVIVMDGV 357 Query: 364 FAIFYFAIGI 373 FAIF+ +IG+ Sbjct: 358 FAIFFASIGM 367 >gi|109948194|ref|YP_665422.1| putative ABC transport system permease protein [Helicobacter acinonychis str. Sheeba] gi|109715415|emb|CAK00423.1| putative ABC transport system permease protein [Helicobacter acinonychis str. Sheeba] Length = 377 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W + D++ ++ +D S ++D + + + Sbjct: 14 DGSGSVLILGGDWDFRTSVFLLDELKKTLSNH--QGRLKMDFSRCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS ++ K + + Y +GK IV+ Sbjct: 72 KERSLNIELCNVSESNACALKVVRDWLEKDGNIESQKTIKKYELV---VTKMGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F L+ + G +PV IL F+ G I Sbjct: 129 NTFLNALNFCGMILFYFIKGVFNPKRF--CFTPLVYHINESGFKVLPVSILTVFIVGFAI 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 QGA QL G + ++++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 TLQGALQLQDMGVPLTTVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ ALII LPL+ +A+ AI+G+ + D+ F+ + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALIIVLPLMVFIADAIAILGSMCAVKYQLDLTFSSYVDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ST T + + G+IKAPF AI +V GF V + S+G+ T VV ++ +I +++ Sbjct: 307 STVTWNHFWVGIIKAPFWGFAIAVVGCMRGFEVRGDTESVGRLTTISVVNALFWIIFLNA 366 Query: 363 LFAIFYFAIGI 373 F+I + +GI Sbjct: 367 TFSIVFSRLGI 377 >gi|238754554|ref|ZP_04615908.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473] gi|238707185|gb|EEP99548.1| ABC transporter, permease protein [Yersinia ruckeri ATCC 29473] Length = 343 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 174/336 (51%), Gaps = 2/336 (0%) Query: 37 SDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 S DLS + +DT GA L+ + + ++ L+ + Sbjct: 9 PASITFDLSQLGRLDTAGATLLATLLGGERISHLRELAPLLPDERRILLETVSQVLPNLA 68 Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + L IG+ + D S GL + +++ SL Sbjct: 69 SQPTVKPPPFWIGLLVPIGQSVDNLWQDFKSLLGFTGLTLEALFGTVFRPSRWRM--TSL 126 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 I + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE VLLT Sbjct: 127 IANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFAVLLT 186 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT + Sbjct: 187 AILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTFIGMV 246 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 I G +V +I +F S ++ L + G+ KAP A I I+ EGF V Sbjct: 247 CGIFGGMVVCALALNISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEGFKVS 306 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 307 GSAESVGIHTTTSVVHSIFVVILLDAVAALFFMEMG 342 >gi|15646075|ref|NP_208257.1| hypothetical protein HP1466 [Helicobacter pylori 26695] gi|2314643|gb|AAD08507.1| conserved hypothetical integral membrane protein [Helicobacter pylori 26695] Length = 377 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSIIFSKLNI 377 >gi|304319773|ref|YP_003853416.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis HTCC2503] gi|303298676|gb|ADM08275.1| hypothetical protein PB2503_00972 [Parvularcula bermudensis HTCC2503] Length = 380 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 195/362 (53%), Gaps = 3/362 (0%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G W D + A+N + D A +DLS I +DT GA ++ + G+ + Q Sbjct: 21 GEWTLRGGLTKIDSKIRALNFGPREDLAEIDLSQIEALDTAGALMLQRLRHRCMGEGRPQ 80 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQK-PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131 ++T R SF L +G+ + N+ + Sbjct: 81 AIATLTGMTDPQHELMERMAAHIADCEGDPPRRKSFILLLNRVGQGTIAVGNEGLAILSF 140 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G V++ S +F+ L + + M G++ +V L+SF+ GAV+A GA LS Sbjct: 141 VGSVVARLAGTIMSPARFR--LTATVAHMEEAGLNSTLIVGLMSFLIGAVVAFMGARVLS 198 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGAE+FS++L+ I LRE GVLLTA++IAGRSGSA A IGSMK+ EEIDA+R +G+ Sbjct: 199 EFGAEVFSVELVGISVLREFGVLLTAILIAGRSGSAFTASIGSMKLREEIDAMRALGISP 258 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + LI PR AL+++LP+L LA F ++G +V W DIP +F R T+ N+F Sbjct: 259 LDALILPRTIALVLTLPVLAFLAGFLGLLGGGVVGWLALDIPPQLFIGRLQEIVTVENLF 318 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GL+KAPF A I +V G +V + LG++ T VVQS+ +VI++D+LFA+ + + Sbjct: 319 VGLVKAPFFAFVIAVVGCYHGMSVENSAEELGRRTTMAVVQSLFLVILLDALFAMLFLEL 378 Query: 372 GI 373 I Sbjct: 379 DI 380 >gi|325998313|gb|ADZ50521.1| hypothetical protein hp2017_1400 [Helicobacter pylori 2017] Length = 377 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ KK + + Y + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLVKKNDLESKKAGKKYEL---MITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|108563874|ref|YP_628190.1| hypothetical protein HPAG1_1449 [Helicobacter pylori HPAG1] gi|107837647|gb|ABF85516.1| ABC transport system permease [Helicobacter pylori HPAG1] Length = 377 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLETKKAGKHYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|15612424|ref|NP_224077.1| hypothetical protein jhp1359 [Helicobacter pylori J99] gi|4155971|gb|AAD06935.1| putative [Helicobacter pylori J99] Length = 377 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S +ID + + + Sbjct: 14 DGANSVLILRGDWDFRTSVFRLDELKKNLLDH--QGSLKMDFSGCQKIDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK +V+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEDDLESKKAGKKYEL---MITKLGKSLVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F ++ L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CIIPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|319791003|ref|YP_004152643.1| hypothetical protein Varpa_0310 [Variovorax paradoxus EPS] gi|315593466|gb|ADU34532.1| protein of unknown function DUF140 [Variovorax paradoxus EPS] Length = 388 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 92/372 (24%), Positives = 177/372 (47%), Gaps = 13/372 (3%) Query: 3 ENGITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + G G W + +S + + ++ + +D DL I ++D IGA+L+ Sbjct: 25 QEGRQWTVATGRWTALGMSSLPAWQALSKSLAAAPPADDRAWDLRPIEQLDHIGAQLLWE 84 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 Q +++ + + + + ++ + +V Sbjct: 85 HWRHEWPATL-----EMEAQHKAVLDQVAQYTVATPVEPPKTLADRIRTFSHNGPRAMVV 139 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + ++G + + G + ++ +Y G + + + L+ + G Sbjct: 140 ----ARDFIGLIGQLAIDVGTLIRAPHRAP--WRDFSGHLYQFGATALHITALVGLLIGV 193 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A + QL +GAE F ++++ + +RE+G +L AV+IAGRSGSAI A+IG M++ EE Sbjct: 194 VLAYLISQQLRNYGAEAFVVNILGLSLVRELGPVLAAVLIAGRSGSAITAQIGVMRVTEE 253 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ L+ PR+ AL I++PL+++ + +A++G + DI A F S Sbjct: 254 LDAMRVMGIPHGFRLVMPRVLALAIAMPLISLWTSMAALLGGMLAADAALDISPAYFLSA 313 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +AN++ + K+ I ++ G V ++ SLG+ T+ VV SI+ VI++ Sbjct: 314 LPRAVPIANLWLAMAKSAVFGILIALIGCYFGMKVKPNTESLGRGTTSSVVTSITAVILV 373 Query: 361 DSLFAIFYFAIG 372 D+LFA+ + IG Sbjct: 374 DALFAVLFKGIG 385 >gi|283953736|ref|ZP_06371267.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 414] gi|283794777|gb|EFC33515.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 414] Length = 369 Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 111/364 (30%), Positives = 185/364 (50%), Gaps = 13/364 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69 G W I ++ + IQS I D + +IDT G + ++ + KI Sbjct: 16 GIWDKASIYKLK---IKDFLTLIQSKEVIFDFKDLEKIDTAGVRFFLALENDLKNKNIKI 72 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 QG+++ LF L +++ K +K ++ F ++GK ++ + Sbjct: 73 TKQGLNSRFLTLFELCEKNYQRLNKTKKSHKN-----FSEYFINLGKLSLELLKILREFI 127 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 + G ++ + F+ L++ + + +P+VIL + + G V+A Q A+Q Sbjct: 128 NFTGAFFTSLFLCLKNPKNFR--LIAFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 185 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ TMG Sbjct: 186 LAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGF 245 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 +I PR+ AL++++PL+ +++ +I+G ++ DI FA F RF + + Sbjct: 246 RSFEFIIIPRVMALVVAMPLIVAISDAISIVGGMMIAKLNLDISFAEFLRRFREAVDIKH 305 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I GL+KAP IG++A GF V + S+G T VV +I VI D+LF++ Sbjct: 306 ILIGLVKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 365 Query: 370 AIGI 373 + GI Sbjct: 366 SAGI 369 >gi|220934666|ref|YP_002513565.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] gi|219995976|gb|ACL72578.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] Length = 375 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 100/368 (27%), Positives = 180/368 (48%), Gaps = 8/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R AG +S + + + + K VD S + D G L++ + + Sbjct: 16 GVVLRLAGRLDVHTVSTVWGEALAGL-KVRSGRPVRVDTSGVDYCDGAGVALVVDLLRQP 74 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G+ E++ ++ + + + L H+ + Sbjct: 75 RDPGAEVGLGETPEEVRRMLVPFDVRDFSGE----AVPPQRGPGLKQHLANGMHDLGRYL 130 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 Q +G + + + + G + +P+V+LI+F+ G ++A Q Sbjct: 131 YLQVAFVGEATAAMFHAARHPRQVR--WRDALNLAQEAGANALPIVMLIAFLMGVILAFQ 188 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A + QFGAEIF +L+++ LRE+ L+TA+++AGRSG+A AEIG+MK+NEEI+A+ Sbjct: 189 SAVAMRQFGAEIFVANLVALSLLRELAPLMTAILLAGRSGAAFAAEIGTMKVNEEINALT 248 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMGLD VR L+ R+ A + +PLLT++AN ++G ++V+ + DIPF +F++ S Sbjct: 249 TMGLDPVRFLVVTRVLAAVAVMPLLTLVANLVGLVGGAVVMKGF-DIPFVTYFNQVTSAV 307 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 TL+++ GL KA + V G + ++G T VV +I ++++ D +FA Sbjct: 308 TLSDLLGGLFKATVFGLLVAGVGCLRGLETRSGAAAVGISTTRAVVSAIILIVVADGVFA 367 Query: 366 IFYFAIGI 373 + ++ + I Sbjct: 368 VVFYHLDI 375 >gi|325293034|ref|YP_004278898.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325060887|gb|ADY64578.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 386 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 163/370 (44%), Positives = 224/370 (60%), Gaps = 6/370 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G + +G+W++ +S I + I KS + +DLS++ IDT GA +I Sbjct: 22 SGGGQRYALSGSWRNSNLSGIFARLEN-IEKSGPAGPVEIDLSSVEAIDTTGAWVIRRLR 80 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 E K ++ + E++ LI K +P + IG+ +V+ Sbjct: 81 EDMEAKGVTVTLTGN-ERIEDLIGQLPDKAAMEGEP--VAKVGLAERFFSPIGQAVVQNG 137 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 D + +ILG + +++ Q+ ++GV VP+++L+SF+ GA+I Sbjct: 138 ADFLAGMYILGSAVRGAQMKLGRGRGVSP--AAIVNQIDHMGVRAVPIIMLMSFLIGAII 195 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EEID Sbjct: 196 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEID 255 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +GL+ V +L+ PR+ AL I+LPLLTILANF+A+ GA+IV Y I F VF SR H Sbjct: 256 ALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALFGAAIVTLLYSGITFEVFLSRLH 315 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + I G+IKAPFMA IGIVA EG VG + SLGK VT+ VV+SI +VI++D Sbjct: 316 GAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAESLGKHVTSSVVKSIFVVILVDG 375 Query: 363 LFAIFYFAIG 372 LFAIFY AI Sbjct: 376 LFAIFYAAID 385 >gi|241767246|ref|ZP_04764987.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241362094|gb|EER58209.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 373 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 89/364 (24%), Positives = 172/364 (47%), Gaps = 12/364 (3%) Query: 11 FAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 G W + E+ + + + A + + + DL + +D +GA+L+ + Sbjct: 21 LLGRWGAAELGQRSQWRALSAQLRDNTAPAGGWDLRGLDWLDHVGAQLLWDHWGQAW--- 77 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 +L + P + H+G ++ ++ + Sbjct: 78 ------PGRLELTDPQRAMLERVGAFTAPPPPAEPWRLADQADHLGVLVLHGLDHARHVV 131 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G + + + ++ + +Y +G + +P+ L+ F+ G V+A + Q Sbjct: 132 QLIGQLALDLLRLVRAPHRAP--WRDMSGHVYRMGATALPITALVGFLIGVVLAYLMSLQ 189 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L Q+GAE F ++++ I +RE+G +L A+++AGRSGS+I A+IG M++ EE+DA+R MG+ Sbjct: 190 LRQYGAESFIVNILGISLIRELGPMLAAILVAGRSGSSITAQIGVMRVTEELDAMRVMGI 249 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 L+ PR AL +++PL+++ +A+ G + I A F + + N Sbjct: 250 PHGFRLVMPRTLALALAMPLISVWTTLAALAGGMLAADVSMGISPAYFVEALPAAVKIGN 309 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + K+ I ++ G V ++ SLG+ T VV SI++VII+D+LFA+ + Sbjct: 310 LGLATAKSVVFGALIALIGCHWGLRVKPNTQSLGEGTTASVVTSITMVIIVDALFAVAFK 369 Query: 370 AIGI 373 IGI Sbjct: 370 NIGI 373 >gi|157415866|ref|YP_001483122.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81116] gi|157386830|gb|ABV53145.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni 81116] gi|307748503|gb|ADN91773.1| ABC transporter, permease protein, putative [Campylobacter jejuni subsp. jejuni M1] gi|315931385|gb|EFV10354.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 369 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LIKFTNFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL++++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVVLTSAGI 369 >gi|210135633|ref|YP_002302072.1| ABC transporter permease protein [Helicobacter pylori P12] gi|210133601|gb|ACJ08592.1| ABC transporter permease protein [Helicobacter pylori P12] Length = 377 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|146305413|ref|YP_001185878.1| hypothetical protein Pmen_0373 [Pseudomonas mendocina ymp] gi|145573614|gb|ABP83146.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp] Length = 379 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 122/371 (32%), Positives = 203/371 (54%), Gaps = 5/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + + R G+W S + V+ + VDL + +DT GA L++ Sbjct: 13 STDAASGLRIGGDWTLAHYSRLEPQVLALRERL--HGQESVDLDELAALDTAGAALLVEL 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + Q + E+ +L+ +Q+ Q+ ++ + + HIG+ + Sbjct: 71 LGSERLRQLAQQDNLSTER-RALLLAVADAMAGSQQVQQHATPSALREVLGHIGEAVETT 129 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +GL +S +++ L SL + G++ VP+V L++F+ GAV Sbjct: 130 WCHGRELLGFMGLTLSGMLTILLRPARWR--LTSLAAHLEQCGLNAVPIVALLTFLVGAV 187 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L+ FGA I++++L++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEI Sbjct: 188 VAFLGATILADFGASIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEI 247 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DAIRT+GL + +L+ PR++A++I+LP+LT +A S I+G ++V DIP ++ S Sbjct: 248 DAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGAVVCAVSLDIPLTMYMSIL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + L + GL+KAP A I ++ EGF V + S+G+ T+ VVQSI +VI++D Sbjct: 308 QDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVILLD 367 Query: 362 SLFAIFYFAIG 372 +L A+F +G Sbjct: 368 ALAALFLMEMG 378 >gi|82702739|ref|YP_412305.1| hypothetical protein Nmul_A1612 [Nitrosospira multiformis ATCC 25196] gi|82410804|gb|ABB74913.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 384 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 111/366 (30%), Positives = 191/366 (52%), Gaps = 5/366 (1%) Query: 9 FRFAGNWKSPEISEIADD--VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 GNW + + + ++ ++ + + VDL + +DT GA + + Sbjct: 21 LNVRGNWTLENYAALGEQIALLRHRSRGLAAAGRNVDLGGLAALDTAGAARLYELLG-AE 79 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +L + +L+ + K + +F + H G + F Sbjct: 80 LAGELAASDALSRERSALLLMVAKAMEAAGKVSQRRQRGAFIEIFGHAGVALEIFRQQIL 139 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + +++ L S++ Q++ G++ VP++ L++F+ GAVIA G Sbjct: 140 ALLGFMGFTLDALARGLLHPKRWR--LTSIVAQIHETGLNAVPIIALLNFMVGAVIAFLG 197 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L+ FGA I++++L++ LRE+GVLLTA+++AGR+ S A++GSMKINEEIDA R Sbjct: 198 ATVLANFGASIYTVNLVTFAFLRELGVLLTAILMAGRTASTFTAQLGSMKINEEIDATRV 257 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ V +L+ PR+ AL +SLP+LT + S I+G ++V DI A+F + F Sbjct: 258 LGLNPVNLLVLPRVLALFVSLPILTFVGMISGILGGALVCALQLDISLAMFLTIFQDQIE 317 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + G+ KAP A IG++ EG V + S+G+ T VV SI +VI +D++ A+ Sbjct: 318 LRHFLVGMSKAPVFAFVIGVIGCLEGLKVSGSALSVGQHTTASVVHSIFVVIFLDAMAAL 377 Query: 367 FYFAIG 372 F+ +G Sbjct: 378 FFMEMG 383 >gi|208435334|ref|YP_002267000.1| ABC transport system permease [Helicobacter pylori G27] gi|208433263|gb|ACI28134.1| ABC transport system permease [Helicobacter pylori G27] Length = 377 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y + +GK IV+ Sbjct: 72 KERSLSIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---MITKLGKSIVETC 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSILFSKLNI 377 >gi|148925785|ref|ZP_01809473.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845795|gb|EDK22886.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 369 Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 184/369 (49%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI + +++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKESLNSRFQILFELCEKNYQRLGKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG ++ PR+ AL+I++PL+ +++ +IIG +V DI FA F RF Sbjct: 241 NTMGFRSFEFIVIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVILTSTGI 369 >gi|119385048|ref|YP_916104.1| hypothetical protein Pden_2317 [Paracoccus denitrificans PD1222] gi|119374815|gb|ABL70408.1| protein of unknown function DUF140 [Paracoccus denitrificans PD1222] Length = 364 Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats. Identities = 122/366 (33%), Positives = 198/366 (54%), Gaps = 19/366 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V R AG + + ++ + ++ ++LS +T +DT A + + Sbjct: 18 VLRLAGEFTVWTLGQLPPE---------AGTASRLELSGLTRLDTAAAWYLT---GRERE 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 L G++ QL + Q S ++ + G+++V + Sbjct: 66 GASLDGLTGTQAQLLDTVRQAL-----PQPEAESAGPAGWRLMLEQTGRRMVAALVFLRE 120 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 A LG ++ F+ SL+ G+ VP+V L+SF+ G V+A QGA Sbjct: 121 IAEYLGRFLAALARGIRHPGDFR--FTSLVYHCQETGLRAVPIVALMSFLIGIVLAFQGA 178 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGAE+F IDL++I LRE+G+LLTA+++AGR+ SA+ A IGSMK+NEEIDA+RT+ Sbjct: 179 VQLRQFGAEVFVIDLIAISILRELGILLTAIIVAGRTASALTASIGSMKMNEEIDAMRTL 238 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD +LI PR+ ALII+LP+L ++AN + ++G +++ W I ++F R + ++ Sbjct: 239 GLDPDMVLILPRVLALIITLPILGLIANIAGLVGGALMSWIELGISPSMFRYRLLADTSV 298 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ G VG + SLG + + VV +I VI+ D+LF+IF Sbjct: 299 DHVIVGLSKAPVFALIIGVIGCHAGMKVGKDAESLGAETSRAVVNAIFAVIVADALFSIF 358 Query: 368 YFAIGI 373 + +G+ Sbjct: 359 FSEVGL 364 >gi|217033903|ref|ZP_03439327.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10] gi|216943666|gb|EEC23111.1| hypothetical protein HP9810_870g35 [Helicobacter pylori 98-10] Length = 377 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 178/371 (47%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y L +GK IVK Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKEAGKHYEL---LITKLGKSIVKTY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSAFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIIFSKLNI 377 >gi|207091861|ref|ZP_03239648.1| hypothetical protein HpylHP_01931 [Helicobacter pylori HPKX_438_AG0C1] Length = 377 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGADSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|312797432|ref|YP_004030354.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] gi|312169207|emb|CBW76210.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 390 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 16/370 (4%) Query: 9 FRFAGNWKSPEISEIADD-----VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 R G W + ++ + + + + DLS I +D +GA+ + Sbjct: 31 IRLGGQWTALSLALDQRRGGIAAKLRTLRDAAARADTLWDLSPIQRLDHVGAQALWQIWG 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ ++ ++F I+ + + + + +G + F Sbjct: 91 RHLPCGLS--LTDTQREIFERIALLDATREPAEP-------AAAIDPITRLGLAVFGFAG 141 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG ++ + G + + +Y G +P+ L++F+ G V++ Sbjct: 142 HLRDGITLLGGLVIDCGRLLRDPRRIP--WSEISANVYAAGAQALPITALVAFLIGIVLS 199 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L A+++AGRSGSAI A++G M++ EE+DA Sbjct: 200 YLSAQQLRLFGANAYIVNILGLSIIRELGPVLAAILVAGRSGSAITAQLGVMRVTEELDA 259 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL I + A+ G + +I + F S Sbjct: 260 MRVMGISHGLRLILPRVIALGVAMPLLVIWTDAIALAGGMLAAQLVLNIDMSFFIRSLPS 319 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I +V G + +S SLG+ TT VV SI++V++ D++ Sbjct: 320 VVPVANLYLGLGKGVAFGMLIALVGCHFGLRIKPNSQSLGEGTTTSVVSSITVVMLADAV 379 Query: 364 FAIFYFAIGI 373 FAI + IG+ Sbjct: 380 FAIMFQRIGL 389 >gi|302039183|ref|YP_003799505.1| putative ABC transporter permease [Candidatus Nitrospira defluvii] gi|300607247|emb|CBK43580.1| putative ABC-type transport system, permease component [Candidatus Nitrospira defluvii] Length = 373 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 112/368 (30%), Positives = 181/368 (49%), Gaps = 15/368 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62 R G W P+++ + + + + + S I DT GA ++ + Sbjct: 15 GRTLRCRGAWTMPDVAPVERALRRM--TWPARSALVFEASGIEAFDTGGAVVLYRALMEA 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ +QG+ QL SL+S + P+++ I + Sbjct: 73 RRQGCEVSIQGLRPDYAQLMSLVSSHWAAMVAEVAPRQNGS--------ERFRASIRNRV 124 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 LG + AS + + S + + GV +P+ L++F+ G VI Sbjct: 125 AQGAGALEFLGESATALVRLVASPRRLR--WRSCLNSLRLDGVHALPITGLLTFLIGVVI 182 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL +FG IF +DL+ I LREI L+ A++IAGRSGSA A+IG+MK+ EE+D Sbjct: 183 AYQGAEQLRKFGTNIFIVDLVGISLLREIAPLIAAILIAGRSGSAYAAQIGTMKVTEELD 242 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++T GL + +L+ PR+ AL+++LPLLT A+ + G ++ ++ F F SRF Sbjct: 243 ALQTFGLSPIELLVLPRVLALVVALPLLTAYADVLGVFGGMLIASNQLNVSFTAFLSRFE 302 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L ++ GL KAPF A I +V +GF + + +G+ T VVQSI +VII D+ Sbjct: 303 EAVALRHMLIGLGKAPFFAVIIALVGCYQGFQIRGGVDDVGRHTTISVVQSIFLVIIFDA 362 Query: 363 LFAIFYFA 370 + +I Sbjct: 363 ICSILLNW 370 >gi|15965586|ref|NP_385939.1| hypothetical protein SMc00174 [Sinorhizobium meliloti 1021] gi|307302706|ref|ZP_07582462.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C] gi|307318554|ref|ZP_07597988.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83] gi|15074767|emb|CAC46412.1| Probable ABC transporter [Sinorhizobium meliloti 1021] gi|306895894|gb|EFN26646.1| protein of unknown function DUF140 [Sinorhizobium meliloti AK83] gi|306903070|gb|EFN33661.1| protein of unknown function DUF140 [Sinorhizobium meliloti BL225C] Length = 379 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 152/371 (40%), Positives = 216/371 (58%), Gaps = 10/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + F+G+W+ +A + + + D S IT +DT GA +I F Sbjct: 18 AAGNGRRYVFSGDWRHETAEAMAAKLKRL--EKPAGGQSEFDFSGITRMDTAGAWIIRRF 75 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 M +++ G + E + +L R + + F+ L +G+ V Sbjct: 76 MNGTADEVRFTGGERYAELVRALPKQLRR------PEESATRMPLFQRLFTPVGELTVSI 129 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ + ILG + +++ Q+ +GV P++ L+SF+ GA+ Sbjct: 130 WTDTVAAMFILGSAVRGAQMKLGRHAGVSP--AAIVHQIDRMGVMATPIITLMSFLIGAI 187 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+ Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL V +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y DI F +R Sbjct: 248 DALKVMGLSPVGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWTYSDITIPTFLARL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ G+IKAPFMA IG+VA EG VG + SLG++VT+ VV+SI +VI+ID Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367 Query: 362 SLFAIFYFAIG 372 LFA+FY AI Sbjct: 368 GLFAMFYAAID 378 >gi|298735565|ref|YP_003728086.1| putative ABC transport system permease protein [Helicobacter pylori B8] gi|298354750|emb|CBI65622.1| putative ABC transport system permease protein [Helicobacter pylori B8] Length = 377 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F+ + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|328954405|ref|YP_004371739.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328454729|gb|AEB10558.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 418 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 96/368 (26%), Positives = 181/368 (49%), Gaps = 6/368 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G +G + +++ + ++ + + Q S +DL + +D+ GA ++ E Sbjct: 57 DGGQKLLISGRLELFDLAIFSREI-QPLLQQPQLSSVGLDLGGLEYLDSAGALAVLQLAE 115 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K + + + ++ ++ + + + +G+ + F Sbjct: 116 KLKSQGIICTLDNISPKIKKILDLIDIQALTHPP---LITVGKRFGWISQVGEASLAFWR 172 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D G ++ + C + + ++ M GV G+P+V LI + G +IA Sbjct: 173 DIIEVIAFFGELLLDLASVCLRPRRVR--WEYVMFYMKRAGVDGLPIVSLIGLLLGLIIA 230 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL QFGA I+ L+ + +RE+G ++TA+++AGRSGSA AEIGSMK++EE+DA Sbjct: 231 FMSSLQLQQFGANIYVASLLGVAMVRELGPIMTAILVAGRSGSAFAAEIGSMKVSEEVDA 290 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG + +R+L +P++ A ++ +PLLTI A+ IIG IV D+ + Sbjct: 291 LTVMGFNPMRMLTTPKVIASLVVVPLLTIYADLLGIIGGLIVGVTMLDLTVYSYIQETRR 350 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 TL + + IK+ A I + + GF V ++++G T+ VV +I ++I++DS+ Sbjct: 351 ILTLFDFTSSFIKSVVFAFLIAAIGCQRGFQVRGGASAVGSATTSAVVAAIFLIIVVDSI 410 Query: 364 FAIFYFAI 371 FAI + Sbjct: 411 FAIVLTYV 418 >gi|254779978|ref|YP_003058085.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] gi|254001891|emb|CAX30141.1| ABC-type transport system, permease; putative membrane protein [Helicobacter pylori B38] Length = 377 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKKLLDH--QGPLKMDFSGCQKVDFVFGMFLFDLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + +I K+ + + Y L +GK IV+ Sbjct: 72 KERSLNIELCNVSENNACALKVIKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGTLQLQDMGAPLVSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSIVFSKLNI 377 >gi|126666401|ref|ZP_01737380.1| ABC transporter, permease protein, putative [Marinobacter sp. ELB17] gi|126629202|gb|EAZ99820.1| ABC transporter, permease protein, putative [Marinobacter sp. ELB17] Length = 387 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 110/364 (30%), Positives = 191/364 (52%), Gaps = 4/364 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+W P + V A S + ++L + IDT GA L+ + ++ + Sbjct: 27 ISACGDWTLPYYHALYSSVTAAGQDSDRYQ--TLNLQTLGRIDTAGAALLAELVGPHNLE 84 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 L + + + + + +Q+P + + L +G + + + Sbjct: 85 QWLADNPQAVSRETAALLSAVATAMADQQPLPAPPGFTLSGLVRDVGAWVNELYQLVVTL 144 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G +I+ +++ + + + G++ VP+V L++F+ GAV+A GA Sbjct: 145 IGFIGQIIAALAWTTLHPRRWRM--TAFVAAVQDTGLNAVPIVALLTFLVGAVVAFLGAT 202 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ FGA I++++L++ LRE GVLL A+++AGR+ S+ A+IG+MK+NEE+DA+RT+G Sbjct: 203 VLADFGATIYTVNLVAFSFLREFGVLLAAILLAGRTASSFTAQIGAMKVNEELDALRTLG 262 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 L + +L+ PR+ A+++SLPLLT + S ++G ++V DI F S L Sbjct: 263 LSPIELLVLPRVLAMMVSLPLLTFVGMISGMVGGALVCSMTLDITPTQFISIVSQDVALK 322 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL KAP A I VA EGF V + S+G T+ VVQSI +VI+ DS+ A+F+ Sbjct: 323 HLLVGLSKAPIFAFLIAAVACLEGFKVSGSAQSVGVHTTSSVVQSIFMVILFDSIAALFF 382 Query: 369 FAIG 372 +G Sbjct: 383 MEMG 386 >gi|86152962|ref|ZP_01071167.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843847|gb|EAQ61057.1| ABC transporter, permease [Campylobacter jejuni subsp. jejuni HB93-13] Length = 369 Score = 247 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 110/369 (29%), Positives = 184/369 (49%), Gaps = 13/369 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKITKEGLNSRFQILFELCEKNYQRLGKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LIKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG ++ PR+ AL++++PL+ +++ +IIG ++ DI F F RF Sbjct: 241 NTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMIAKLNLDISFVEFLRRFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +IF GL KAP IG++A GF V + S+G T VV +I VI D+LF Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALF 360 Query: 365 AIFYFAIGI 373 ++ + GI Sbjct: 361 SVVLTSAGI 369 >gi|218780630|ref|YP_002431948.1| hypothetical protein Dalk_2788 [Desulfatibacillum alkenivorans AK-01] gi|218762014|gb|ACL04480.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans AK-01] Length = 377 Score = 247 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 97/366 (26%), Positives = 177/366 (48%), Gaps = 6/366 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ ++ R G +A + AI K + ++DL +T +D GA L+ + Sbjct: 13 NDGKGSILRLHGPLDQDAYFALAGPLRQAIKKGC-AGELVIDLKDVTRLDDFGALLLAHV 71 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + H + + ++ H +++ N + N +G I+ Sbjct: 72 HKAAHAVNSPCSIEAARPSVREVLDLLHFQRLINAPALEKPKHE---NPFVALGGAIIDK 128 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + G V+ + + ++ M VGV VP+V LI+F+ G + Sbjct: 129 VLGAKELIDFTGDVLLCAAIVVRHPFSMR--WDDMLTAMRKVGVDAVPIVGLINFLLGFI 186 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + QL QFGA I+ L++I +RE+G ++TA+++ GRSGSA +EIG+MKI+EE+ Sbjct: 187 MAFMTSVQLKQFGANIYVAPLVAIAMVRELGPIMTAIVVTGRSGSAFASEIGAMKISEEV 246 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMG + V L+ P++ A +I +P+LT+ A I+G +V + D+ + + S Sbjct: 247 DALSTMGFNPVVFLVMPKMTAAMIVMPILTVFACLFGILGGLLVGVVFLDLTLSNYLSET 306 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ + KA A I + GF V S+++G+ T+ VV I ++I+ D Sbjct: 307 IDSLSMYAVNWCFFKAVVFAFLITWIGCLRGFQVKGGSSAVGEATTSSVVSGIFLIILWD 366 Query: 362 SLFAIF 367 +FA Sbjct: 367 CIFAFI 372 >gi|307825468|ref|ZP_07655686.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] gi|307733354|gb|EFO04213.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] Length = 379 Score = 247 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 178/372 (47%), Gaps = 14/372 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G + + G+W + A ++ I+ + + DLS+I +D+ + ++ Sbjct: 20 SDGQSCVKLTGSWNLRSLVT-ATELNRKISSHAANKNIQWDLSSIEVLDSASSLILWKAW 78 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG-KKIVKF 121 K + ++LF + + QK S +L G + F Sbjct: 79 GKKLP--VALQLKPEHQRLFD--------RWQAQKIPEPEPVGSSSSLIIKYGYQLFANF 128 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +LG + + G + +Y GV + + L+ F+ G V Sbjct: 129 WGQLLQLVTLLGQLFLDIGYLLLHPGDIP--WSEISITIYESGVRALGITALVGFLIGIV 186 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FGAEI+ ID++ + +RE+G LL A+++AGRSGSA+ A+IG M++ EE+ Sbjct: 187 LSYLSALQLKIFGAEIYIIDILGLSVIRELGPLLAAILVAGRSGSAMTAQIGIMRVTEEL 246 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ L P++ AL I LPL+ + + A+IG + DI + FF + Sbjct: 247 DALSAMGISHSLRLTLPKVMALTIVLPLIGVWTSALALIGGMVSAQNTLDISYQQFFLKL 306 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L N+F GL K+ I ++A GF + ++ SLG + T VV +I++VI++D Sbjct: 307 PDVVPLTNVFIGLGKSAVFGLMIALIACHFGFRIKPNTESLGNETTNSVVAAITVVIMVD 366 Query: 362 SLFAIFYFAIGI 373 ++FAI + +G+ Sbjct: 367 AVFAILFMNVGM 378 >gi|317013234|gb|ADU83842.1| putative ABC transport system permease protein [Helicobacter pylori Lithuania75] Length = 377 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 14 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 RERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 STFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 VFSIVFSKLNI 377 >gi|186474974|ref|YP_001856444.1| hypothetical protein Bphy_0205 [Burkholderia phymatum STM815] gi|184191433|gb|ACC69398.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 379 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 175/370 (47%), Gaps = 14/370 (3%) Query: 8 VFRFAGNWKSPEISEIA----DDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + R +G W + ++ + ++ A DLS + +D +G + + Sbjct: 19 IVRLSGQWTALALARDRLHGQALPRLRELVDSRAHVAQWDLSNVERMDHVGGQALWRVWG 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 Y L ++ +F I+ + + +R + +G I F+ Sbjct: 79 -YKLPRDLVALNDTQRDIFDRIALLDTVRENPEPVRR-------FDPFTQLGLGIFSFVE 130 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + G VI + + + +Y G +P+ L++F+ G V++ Sbjct: 131 HVYGGVAMFGRVILDLLSIARNPKLAP--WKEISANVYSAGTQALPITALVAFLIGIVLS 188 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA F ++++ + LRE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 189 YLSAQQLRLFGANQFIVNILGMSVLRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 248 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N +++G ++ I + F Sbjct: 249 MRVMGIPHGLRLILPRVIALSLAMPLLVMWTNIISLLGGALAAKLVLQIDVSYFVRALPG 308 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 309 VVPVANLWIGLGKGMVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVSSITIVILADAV 368 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 369 FAILFQNVGL 378 >gi|330501346|ref|YP_004378215.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01] gi|328915632|gb|AEB56463.1| hypothetical protein MDS_0432 [Pseudomonas mendocina NK-01] Length = 381 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 120/371 (32%), Positives = 202/371 (54%), Gaps = 5/371 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + + R G+W S++ V+ + VDL + +DT GA L++ Sbjct: 15 STDAASGLRLGGDWTLAHYSQLEPQVLALRERL--HGKESVDLGDLAALDTAGAALLVEL 72 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + +Q E+ +L+ + Q + + + + HIG+ + Sbjct: 73 FGSERLRQLIQQA-ELDERRRALLLTVADAMAGSAPAQAASEPSVLREVLGHIGEVVEGM 131 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +GL +++ +++ L SL + G++ VP+V L++F+ GAV Sbjct: 132 WHQGRALLGFMGLTLTSMLAILVRPMRWR--LTSLAAHLEQCGLNAVPIVALLTFLVGAV 189 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA L+ FGA I++++L++ LRE GVLLTA+++AGR+ SA A+IGSMK NEEI Sbjct: 190 VAFLGATILADFGATIYTVNLVAFSFLREFGVLLTAILMAGRTASAFTAQIGSMKANEEI 249 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DAIRT+GL + +L+ PR++A++I+LP+LT +A S I+G +V DIP ++ S Sbjct: 250 DAIRTLGLSPIELLVLPRVFAMLIALPILTFIAMLSGIVGGGLVCAVSLDIPVTMYLSIL 309 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + L + GL+KAP A I ++ EGF V + S+G+ T+ VVQSI +VI++D Sbjct: 310 QDSDLLRHFLVGLLKAPIFAFLIALIGCLEGFKVSGSAQSVGEHTTSAVVQSIFVVILLD 369 Query: 362 SLFAIFYFAIG 372 +L A+F +G Sbjct: 370 ALAALFLMEMG 380 >gi|163759630|ref|ZP_02166715.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] gi|162283227|gb|EDQ33513.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica DFL-43] Length = 428 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 148/370 (40%), Positives = 221/370 (59%), Gaps = 4/370 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G G+W+ I+ + +++ + K I ++DLS ++ DT GA L+ M Sbjct: 62 SGGRQRLALWGDWRHAAIAGVYGELLS-VQKKISGADLVIDLSDLSNFDTAGAWLVRKTM 120 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 G+ + + + L+S + + F+ + +G+ + + Sbjct: 121 VVAKGQGASVEIEGASKPVSGLLSAIPD-PADRAEVAATERAPLFQRIFAPVGRALYELF 179 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 +D + +ILG + +++ Q+ ++GV VP+++L+SF+ GA+I Sbjct: 180 DDLIASMYILGSAVRGAQLKL--DRSAGISPAAIVTQIDHMGVRAVPIIMLMSFLIGAII 237 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 AQQGAFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+D Sbjct: 238 AQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVD 297 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +GL+ V +L+ PR+ AL ++LPLLT++ANF+A+ GA+ V W Y I VF SR Sbjct: 298 ALKVIGLNPVGVLVFPRLVALTVALPLLTVVANFAALAGAAAVAWSYSGITPDVFTSRLR 357 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + +G+IKAPFMA IGIVA EG VG + SLG++VT VV+SI +VI++D Sbjct: 358 EAIDMTTVASGMIKAPFMALIIGIVASVEGMKVGGSAESLGRRVTASVVKSIFVVILVDG 417 Query: 363 LFAIFYFAIG 372 LFAIFY AI Sbjct: 418 LFAIFYAAID 427 >gi|237747194|ref|ZP_04577674.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] gi|229378545|gb|EEO28636.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] Length = 374 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 178/370 (48%), Gaps = 13/370 (3%) Query: 5 GITVFRFAGNWKSPEISE--IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G T GNW+ ++ + + + + + S DL+ I E+D IGA+L+ Sbjct: 15 GNTCVIARGNWRVESLAASGVINRIRSTVRSFSKKGSVSWDLTQILELDYIGAQLLWDNW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K + L ++ +LFS + ++ +KP + + Sbjct: 75 NKTRPRELLV--TSEQNKLFSRLESAGNLQLPAEKPAHWQLFGRIRKFPQ-------AAA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y+ G + + ++ F+ G V+ Sbjct: 126 EHFSGIVGLVGQLMIDLARFAKAPH--RGPWTEISANIYHAGAQALGITAIVGFLIGVVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FG ++F ++L+ + +RE+G LL A+++AGRSGS++ A++G M++ EE+ Sbjct: 184 SYLSAQQLHMFGGDVFLVNLLGMSVIRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELS 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MG+ LI P++ AL I +PLL I + A++G + + F S Sbjct: 244 AMQVMGMSHGFRLIMPKVIALSIVMPLLIIWTDIVALLGGMLAASFEIGLSIPYFLSALP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +AN + G+ K I ++A G + ++ SLG+ T VV SI+IVI+ D+ Sbjct: 304 NAVPMANFWIGIGKGIVFGILIALIACYYGMKIKPNTESLGQGTTNSVVTSITIVILADA 363 Query: 363 LFAIFYFAIG 372 +FA+ +G Sbjct: 364 IFAVVLQGVG 373 >gi|121603099|ref|YP_980428.1| hypothetical protein Pnap_0182 [Polaromonas naphthalenivorans CJ2] gi|120592068|gb|ABM35507.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans CJ2] Length = 382 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 89/372 (23%), Positives = 180/372 (48%), Gaps = 20/372 (5%) Query: 11 FAGNWKSPEIS--EIADDVVMAI-------NKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G W + ++ + D + + S + LS + ++D +GA+++ Sbjct: 22 LQGAWTAANLTQKPLWDALAAQLKALRAQTASSASPAALRWSLSPLEKLDYLGAQVLWSA 81 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + + + + + +P S+ +G++++ Sbjct: 82 WNHHWPAGLQ--IEPEQRAMLETVEKFTVRPLPPPRP-------SWLEPVLMLGERLLSL 132 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +LG ++ + G + L +Y G + +P+ L+ F+ G V Sbjct: 133 LSHAKGMLRLLGQLLLDMGRLVRHPQQGP--WRDLSGHLYNFGATALPITALVGFLIGVV 190 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + QL QFGA+ F ++++ I +RE+G +L A++IAGRSGSAI A+IG M++ EE+ Sbjct: 191 LAYLISQQLRQFGADAFIVNILGISLIRELGPVLAAILIAGRSGSAITAQIGVMRVTEEL 250 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R MG+ L+ PR AL + +PL+++ +A++G + + + FF+ Sbjct: 251 DAMRVMGIARGFRLVMPRAMALALVMPLISVWTTIAALLGGMLAADISMGVTPSFFFNAL 310 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++N+ K+ I ++ G V ++ SLG+ T VV SI++VI++D Sbjct: 311 PAAVKVSNLVLATAKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSITVVILVD 370 Query: 362 SLFAIFYFAIGI 373 +LFA+ + ++GI Sbjct: 371 ALFAVLFKSVGI 382 >gi|28974221|gb|AAO64222.1| putative ABC transport system permease protein Cf0016 [Campylobacter fetus] Length = 367 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 107/369 (28%), Positives = 179/369 (48%), Gaps = 20/369 (5%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 V + G + + ++ +DL + ID A K Sbjct: 19 DNAVLKLDGEFDYTMDKKSLKELRSL-------KVDTLDLKNLIRIDYSAATFFA----K 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 ++ KL + +++F+L+S + ++ K ++S NL IGK I+ N+ Sbjct: 68 HYNCPKLINSNDKFDKIFALVSDKYILNLQIIKFKKS-------NLIEQIGKNIINLKNE 120 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S LG + N + + + + L Y G+S V +V L SF+ G V+A Sbjct: 121 LVSFCIFLGEFLFNLTKSLLNPFTVR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAY 178 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QGA L FGA I+ +D+M I+ LRE+G L+ A+++AGRS S+ A+IG MKI +E++A+ Sbjct: 179 QGATMLENFGASIYVVDIMGIMTLREVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAM 238 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +TMG + R ++ P + +I + G +V Y D+ F+ + RF S+ Sbjct: 239 KTMGFEPFRFIVMPACFGSYFGYAFYSIFSKRGKYFGQMMVCNWYLDLSFSDYLERFRSS 298 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + + GL KAPF I ++ K GF V +NS+G+ T VV +I +I +D++F Sbjct: 299 IALRHFWVGLFKAPFFGAVIALIGCKRGFEVSGSTNSVGELTTRSVVNAIFWIIALDAIF 358 Query: 365 AIFYFAIGI 373 +I Y + I Sbjct: 359 SIIYTELKI 367 >gi|317011599|gb|ADU85346.1| putative ABC transport system permease protein [Helicobacter pylori SouthAfrica7] Length = 377 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + +D SA ++D + + + Sbjct: 14 DGADSVLILRGDWDFKTSVFRLDELKKILLDH--QGPLKMDFSACQKVDFVFGMFLFDLV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 72 KGRSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---LITKLGKSIVETY 128 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 129 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 186 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QGA QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 187 ALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 246 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F + RFH Sbjct: 247 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFH 306 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 307 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 366 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 367 IFSIVFSKLNI 377 >gi|116749843|ref|YP_846530.1| hypothetical protein Sfum_2414 [Syntrophobacter fumaroxidans MPOB] gi|116698907|gb|ABK18095.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 384 Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 164/374 (43%), Gaps = 12/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + GNW+ + D ++ + D + E D+ ++ + Sbjct: 20 REDVLLVGLRGNWRIADEPIPVDAIIREFESDPRIRILAFDTGELGEWDSSLLTFLIKVI 79 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + + G+ + +L SL S ++ + +G + + Sbjct: 80 DTGVRRGLEADRTGLPEGVGRLLSLASAVPEATDARRQEAKQP-------FLTRVGTQAI 132 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 LG + + + L+ + G +P+V LIS + G Sbjct: 133 SLAAAVGQMMEFLGEAAIAFFQLVRGRARLRRV--DLMTLIQDCGADALPIVSLISVLVG 190 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++A GA QL FGA+I+ DL+ + RE+G ++TAV++AGR+G+A A++G+M++NE Sbjct: 191 LILAFVGAVQLRMFGAQIYVADLVGLGMAREMGAMMTAVIMAGRTGAAFAAQLGTMQVNE 250 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA++T+G+ + L+ PR+ AL++ +P L + A+ I+G IV + ++ Sbjct: 251 EIDALQTLGVSPMEFLVLPRMLALVLMMPFLCLYADLMGILGGGIVGVGMLGLSPLEYYH 310 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L + GLIK I + G G S ++G T+ VV I +++ Sbjct: 311 ETVQAVGLMDFGAGLIKGAVFGVLIALSGCLRGMQCGRSSAAVGLATTSAVVTGIVAIVV 370 Query: 360 IDSLFAIFYFAIGI 373 D++ + Y +GI Sbjct: 371 SDAILTVIYDRLGI 384 >gi|305432464|ref|ZP_07401626.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter coli JV20] gi|304444503|gb|EFM37154.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter coli JV20] Length = 371 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 109/362 (30%), Positives = 179/362 (49%), Gaps = 13/362 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69 G W +S+I + + I + I D S + EID G + ++K I Sbjct: 18 GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLALEHDLKKNDILI 74 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 QG++T + LF L +++ + Q+ + + F + +G + Sbjct: 75 LKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILSFDLLKILQKFI 129 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 + G ++ + F+ +S + + +P+VIL + + G V+A Q A+Q Sbjct: 130 NFTGAFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 187 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG MKI +EI+A+ TMG Sbjct: 188 LAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEINAMNTMGF 247 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 +I PR+ AL+I++PL+ L++ +I+G +V DI F F RF + + Sbjct: 248 RSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFLRRFREAVEMKH 307 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I GL KAP IG++A GF V + S+G T VV +I VI D+LF++ Sbjct: 308 IIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 367 Query: 370 AI 371 + Sbjct: 368 IM 369 >gi|223936767|ref|ZP_03628677.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894618|gb|EEF61069.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 384 Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats. Identities = 96/374 (25%), Positives = 177/374 (47%), Gaps = 12/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G +G+WKS E+ V ++ + D+S +T + L+M Sbjct: 20 ETGKLQVVASGDWKSGEVFPDVGGVSNKLDVDESIRALSFDVSKVTSWSSGLIGLVMRCR 79 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E + G+ +++L L + + + + + IG ++ Sbjct: 80 ELAMERKIAFDQSGLPQSVQRLIVLALAV-------PEKKDARSLQTRPGIFEKIGLGVL 132 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +G +++ + M G +P+V LI+F+ G Sbjct: 133 GLRRSGEETLKFIGDCTIAFLALAKRKARYR--WTEVWLIMQQCGPDALPIVALINFLVG 190 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A++A GA QLS+FGA I+ DL+ I +RE+GV++ AV++ GR+G+A A++G+MK+N+ Sbjct: 191 AILAFVGAVQLSKFGAAIYVADLVGIATMREMGVIMMAVIMCGRTGAAFAAQLGTMKVNQ 250 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA +T+G+ + L+ PRI L + P+L I A+ AI+G +V + FA ++ Sbjct: 251 EIDAYKTLGISPIEFLVMPRIMCLWLMFPVLCIFADLMAIVGGGVVALAMLNFSFAEYWQ 310 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + TL + F G++K+ + + + G G + ++G T+ VV I++++I Sbjct: 311 ETVAAVTLTHFFIGIVKSFVFGVLVAMTSCLRGIQCGNDAAAVGLATTSAVVTGITVIVI 370 Query: 360 IDSLFAIFYFAIGI 373 D++FA+ GI Sbjct: 371 ADAIFAVILNVFGI 384 >gi|222148407|ref|YP_002549364.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221735395|gb|ACM36358.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 376 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 149/365 (40%), Positives = 224/365 (61%), Gaps = 11/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--FMEKYH 66 R +G+W++ + + ++ + + +D++ I+ +DT GA +I Sbjct: 19 LRLSGSWRNTTVDTVIPKLLEL--RETLNGHVEIDITGISSLDTSGAWIIRRIELAASKQ 76 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 G +++ G S + +L S + + + F+ + +GK V D Sbjct: 77 GDVQIVGGSDAMRELISAL-----PEQPPLPEKVVDRRPFFQRVLEPVGKMSVSLFEDVL 131 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +++LG + T + S++ Q+ ++G+ VP+++L+SF+ GA+IAQQG Sbjct: 132 AMSYVLGSAVRGTQSKERRGGRASI--ASIVNQLDHMGLRAVPIILLMSFLIGAIIAQQG 189 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 AFQL FGAE+F +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+DA++ Sbjct: 190 AFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEVDALKV 249 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL+ + +L+ PRI AL+I+LPLLT++ANF+A+ GA++V + Y I F VF +R H Sbjct: 250 IGLNPIGVLVLPRIVALVIALPLLTVIANFAALYGAAVVSFAYSGITFQVFVTRLHDAVD 309 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 A GLIKAPFMA IGIVA EG VG + SLG+ VT VV+SI +VI++D LFA+ Sbjct: 310 YATFAAGLIKAPFMAVVIGIVAAVEGMKVGGSAESLGQHVTASVVKSIFVVILMDGLFAV 369 Query: 367 FYFAI 371 FY AI Sbjct: 370 FYAAI 374 >gi|56479165|ref|YP_160754.1| ABC transporter permease [Aromatoleum aromaticum EbN1] gi|56315208|emb|CAI09853.1| Possible ABC transport permease [Aromatoleum aromaticum EbN1] Length = 374 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 94/371 (25%), Positives = 176/371 (47%), Gaps = 12/371 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 R G+W ++ AD+ + ++ +A L +T +D+ GA L+ + Sbjct: 14 SGARPECRLEGDWTLRALAPRADEFRRLLARA--GPAASWKLDGVTRLDSFGATLLWHAW 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + L + R + +P + + +G ++ F Sbjct: 72 REQW--------PQDLSADDELRAVIGRIEATAAEPLPEARAFTLTDAIVVLGAGLLGFA 123 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G + + + L + +Y VG PV L+ F+ G V+ Sbjct: 124 NHLAAFVQLAGQLCLDIAYLLRHPRDWP--LREISANLYKVGARATPVAALVGFLIGVVL 181 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA+I+ ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ +E+D Sbjct: 182 SYLSALQLQAFGADIYIVNILGLGIVRELGPVLVSVLVAGRSGSAMTAQLGVMRVTDELD 241 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ MG+ L+ P++ AL +++PLL + + A+ G + W D+ F F Sbjct: 242 ALSAMGISRTVRLVLPKVVALTVAMPLLVLWTSAVALFGGMVSAWVQLDLGFGFFLDTLP 301 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ GL K +I +VA G V ++ SL T VV +I++VI+ID+ Sbjct: 302 RVVPVANLYIGLAKGAVFGLSIALVACHFGLRVRPNTESLSANTTASVVSAITVVILIDA 361 Query: 363 LFAIFYFAIGI 373 +FAI +IG+ Sbjct: 362 VFAIATRSIGV 372 >gi|298292077|ref|YP_003694016.1| hypothetical protein Snov_2101 [Starkeya novella DSM 506] gi|296928588|gb|ADH89397.1| protein of unknown function DUF140 [Starkeya novella DSM 506] Length = 382 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 123/369 (33%), Positives = 195/369 (52%), Gaps = 6/369 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAIN--KSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 VF G W + + + V A+ K ++A +DLS + DT+GA ++ + Sbjct: 18 LVFVGNGRWVAGQGRALEGGVDTALAELKVGAVETARLDLSGVRGFDTVGAVMVDRLLRA 77 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + L+ + + N+ +G+ +V D Sbjct: 78 LEVAGVRFQIVGLERRFRPLLDEIVKGSHDVPPRRH--HVNAVIGGIQLVGQTVVNTGRD 135 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G V++ F+G S++ + G+ VP++ LI+F+ G +IAQ Sbjct: 136 SLVFLSFIGAVVAALLRVIVRPQTFRG--TSMVYHLERTGLRAVPIIALITFLIGCIIAQ 193 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG F +FGA + +D++ IL LRE+GVL+ ++M+AGRSGSA AE+GSM++ EE+DA+ Sbjct: 194 QGIFHFRKFGATTYVVDMVGILTLRELGVLIVSIMVAGRSGSAFTAELGSMRMREEVDAL 253 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG D +L+ PR+ ALII++PLLT + N A+ G +V W Y I +F +R Sbjct: 254 RVMGFDPNEVLVLPRLVALIIAVPLLTFIGNMCALFGGGLVAWLYGGISPEIFLNRLQEA 313 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L G+IKAPFMA +G++A EG VG + SLG T VV++I +VI++D LF Sbjct: 314 IALNTFEVGMIKAPFMAAIVGLIACMEGMRVGGSAESLGAHTTAAVVKAIFLVIVVDGLF 373 Query: 365 AIFYFAIGI 373 A+F+ AI + Sbjct: 374 AMFFAAIDM 382 >gi|57168794|ref|ZP_00367925.1| conserved hypothetical integral membrane protein [Campylobacter coli RM2228] gi|57019841|gb|EAL56524.1| conserved hypothetical integral membrane protein [Campylobacter coli RM2228] Length = 371 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 109/362 (30%), Positives = 179/362 (49%), Gaps = 13/362 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKYHGKI 69 G W +S+I + + I + I D S + EID G + ++K I Sbjct: 18 GIWDKTSVSKIK---IKDLLSQISQTNCIFDFSQLNEIDMAGVRFFLALEHDLKKNDILI 74 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQA 129 QG++T + LF L +++ + Q+ + + F + +G + Sbjct: 75 LKQGLNTRFKSLFELCEKNYQRINEKQEKKFN-----FTDFFISLGILSFDLLKILQKFI 129 Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 + G ++ + F+ +S + + +P+VIL + + G V+A Q A+Q Sbjct: 130 NFTGTFFTSLFLCIKNPKNFR--FISFLYHIENSAFKALPIVILTALLVGVVLAYQAAYQ 187 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L+QFGA IF +DL+ I RE+ L+ A++IAGRS S+ A+IG MKI +EI+A+ TMG Sbjct: 188 LAQFGANIFIVDLVGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEINAMNTMGF 247 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 +I PR+ AL+I++PL+ L++ +I+G +V DI F F RF + + Sbjct: 248 RSFEFIIIPRVMALVIAMPLIVALSDAISILGGMVVAKINLDISFGEFLRRFREAVEMKH 307 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I GL KAP IG++A GF V + S+G T VV +I VI D+LF++ Sbjct: 308 IIIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLT 367 Query: 370 AI 371 + Sbjct: 368 IM 369 >gi|312115045|ref|YP_004012641.1| hypothetical protein Rvan_2318 [Rhodomicrobium vannielii ATCC 17100] gi|311220174|gb|ADP71542.1| protein of unknown function DUF140 [Rhodomicrobium vannielii ATCC 17100] Length = 385 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 118/372 (31%), Positives = 189/372 (50%), Gaps = 10/372 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G +G+W + + V + +D+ + +DT GA ++ Sbjct: 21 ERGTRRLIVSGDWTLAALGDAQAAVDDFEAPHGAAHE--IDIGDVRRLDTAGALTLVGLR 78 Query: 63 --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + L I+ + P+ + Sbjct: 79 DGKAAAKTADFFRARPEHRILLDEIARAAPAAFEPPPPRAGAAVEILRRFLS----AATS 134 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 D+ LG + G +F+ + Q+ G+S VP++ L+SF+ G Sbjct: 135 IGRDAIRLTMFLGETTAALGRVVVHPGRFRI--KAFTHQLQQTGLSAVPIIALVSFLIGG 192 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QQ AFQL +FGAE SID++ IL LRE+GV+L AVM+AGRS SA A+IG+MK+ EE Sbjct: 193 VVMQQSAFQLQKFGAETMSIDMLGILALRELGVILAAVMVAGRSASAFTAQIGTMKMREE 252 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+RT+G+D + L+ PR+ AL+I+LPLL LA+ A+ G +++ Y + ++ R Sbjct: 253 IDAMRTLGIDPIETLVLPRVLALMIALPLLVFLADMMALAGGAVMAKLYLSLDTDMYLQR 312 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +S+ +++ GLIKAPF A IG+V EG + + S+G +VTT VV++I +V+++ Sbjct: 313 LNSSVQAKHLYVGLIKAPFAALVIGLVGCLEGLSAQGSAESVGTQVTTAVVKAIFLVLVL 372 Query: 361 DSLFAIFYFAIG 372 D++FAIF A G Sbjct: 373 DAVFAIFLSAAG 384 >gi|270159818|ref|ZP_06188474.1| putative ABC transporter permease [Legionella longbeachae D-4968] gi|289165424|ref|YP_003455562.1| ABC transporter permease protein [Legionella longbeachae NSW150] gi|269988157|gb|EEZ94412.1| putative ABC transporter permease [Legionella longbeachae D-4968] gi|288858597|emb|CBJ12478.1| putative ABC transporter permease protein [Legionella longbeachae NSW150] Length = 375 Score = 245 bits (626), Expect = 8e-63, Method: Composition-based stats. Identities = 102/370 (27%), Positives = 181/370 (48%), Gaps = 14/370 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62 + G W +I + ++ ++ + I+ D+ GA ++ + Sbjct: 14 RIRYHCTGIWSVLQIDSLVKRFSA--DELPETKKVTISGEGISHFDSAGALALIKCIDKL 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 E+ +++L + +QL LI + +NL Y +GK+ Sbjct: 72 EQRENQVELTDFTETQQQLLELIKSKKDILDYHIP------SAPKENLFYQLGKESENKF 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G + + E + +F L S+I +Y GV+ +P++ L+SF+ G V+ Sbjct: 126 RQVDGLLVLVGDLTTKIIEAFGNWRRF--QLPSIISNIYTTGVTALPILALLSFLIGVVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL +GA F L + RE L+TA+++AGR+ SA A+IGSMK+NEE+D Sbjct: 184 AYQMGLQLQTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAFTAQIGSMKLNEEVD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TMGL +L+ P++ L+I+ PLL ++ +I+G+ I+ I F F R Sbjct: 244 ALLTMGLSPTELLVLPKVIGLLIAFPLLIFWSDLFSILGSMIMSNNMLGINFTDFLQRLR 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVIIID 361 T L+ + GL KAP A I +V +GF V + ++G + T VVQ++ ++II D Sbjct: 304 DTVGLSQLNLGLYKAPAFALLIALVGCFQGFKVEAGTEKNIGSQTTKSVVQALFLIIIAD 363 Query: 362 SLFAIFYFAI 371 +++++ Y + Sbjct: 364 AIYSVIYSRM 373 >gi|217031805|ref|ZP_03437308.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128] gi|216946457|gb|EEC25059.1| hypothetical protein HPB128_199g13 [Helicobacter pylori B128] Length = 367 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 7/371 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +V G+W D++ + S +D S ++D + + + Sbjct: 4 DGANSVLILRGDWDFKTSVFRLDELKKNLLDH--QGSLKMDFSGCQKVDFVFGMFLFDLI 61 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 ++ I+L VS + ++ K+ + + Y L +GK IV+ Sbjct: 62 KERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKKYEL---LITKLGKSIVETY 118 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N + + G+++ + + +F + L+ + G +PV IL F+ G + Sbjct: 119 NTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLPVSILTVFIVGFAV 176 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG QL GA + S+++ + L LREIG + +++AGRS S+ A+IG MKI EE+D Sbjct: 177 ALQGVLQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMKITEELD 236 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG + L+ PR+ AL+I LPLL +A+ AI+G I D+ F+ + RFH Sbjct: 237 AMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFSSYIDRFH 296 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 T + G++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ Sbjct: 297 DTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDA 356 Query: 363 LFAIFYFAIGI 373 +F+I + + I Sbjct: 357 VFSIVFSKLNI 367 >gi|114764121|ref|ZP_01443360.1| ABC transporter, inner membrane subunit [Pelagibaca bermudensis HTCC2601] gi|114543479|gb|EAU46494.1| ABC transporter, inner membrane subunit [Roseovarius sp. HTCC2601] Length = 377 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 9/374 (2%) Query: 1 MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +SE G V +G +S + S +VDL+ + IDT GA L++ Sbjct: 12 LSETGAEAVLSLSGALSIRTVSVLRQRFAALGF----DRSLVVDLAGVERIDTAGAWLLV 67 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + G+ + L+ + + + + R + L IG+ +V Sbjct: 68 DLEARAQAAGGSFGLRNVSDTTALLLDNVRQARPE--REDRPAAARGIQALLEQIGRAVV 125 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LGL ++ G +F+ L +L+ VG+ VP+V L+SF+ G Sbjct: 126 GGLRYFADLTGFLGLFLARLGRVLRHPSQFR--LTALVAHCEDVGLRAVPIVALMSFLIG 183 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG+ QL QFGAE+F +DL++I LRE+G+LLTA+++AGR+ SA A IGSMK+ E Sbjct: 184 VVLAFQGSEQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRTASAFTAAIGSMKMRE 243 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+RT+GLD +L PRI AL++ LP+L ++A+F + G +++ W I ++F + Sbjct: 244 EIDAMRTLGLDPGVMLFVPRILALLLMLPILGLIADFMGLFGGALMAWLELGISPSMFVT 303 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + ++ GL+KAP A IG+V G V ++ SLG+ + VV +I VI+ Sbjct: 304 RLIEGTGVGHLLVGLVKAPAFALIIGVVGCHAGMQVKGNAESLGRMTSGAVVAAIFAVIL 363 Query: 360 IDSLFAIFYFAIGI 373 D+LF++F+ +GI Sbjct: 364 ADALFSVFFAKVGI 377 >gi|182416429|ref|YP_001821495.1| hypothetical protein Oter_4625 [Opitutus terrae PB90-1] gi|177843643|gb|ACB77895.1| protein of unknown function DUF140 [Opitutus terrae PB90-1] Length = 376 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 18/374 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60 + + G+W+ + DVV S + + + A+ D+ + Sbjct: 18 DGNVLEVELGGSWRITDRRPAWMDVVS----SHRPAKLRLHVDAVERWDSSLLLFLFEIG 73 Query: 61 -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + ++ L + ++ +H + + + N +G + Sbjct: 74 EWCRANQVACDTTVLPPRVQTLLTQLASSHATSVPHDRS---------VNFLAVVGNATM 124 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + G + + KF+ + +M G +P+V LI+F+ G Sbjct: 125 ELSRKTQDFVQFFGECVLGAVKLLKRPDKFR--WRDCLEEMQQCGAMALPIVSLIAFLVG 182 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +A GA L Q+G +I+ DL+ + +RE+G ++TAV++AGR+G+A A++G+MK NE Sbjct: 183 VTLAYIGALVLRQYGGDIYVADLIGMAMVREMGAVMTAVVLAGRTGAAFAAQLGNMKANE 242 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ T+G+ V+ L+ PR+ AL + +PLL + AN I+G V DI + ++ Sbjct: 243 EIDALETLGISPVQFLVMPRLLALGVMMPLLALYANALGILGGMAVSAGVLDISPSAYWV 302 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + TL ++ +G IKA +G+ G + +G+ T+ VV SI ++++ Sbjct: 303 EMGTIVTLRDVASGFIKAIAFGGIVGLSGCLRGLQAERSAAGVGRAATSAVVTSILLLVV 362 Query: 360 IDSLFAIFYFAIGI 373 D++FA+ + IG+ Sbjct: 363 ADAIFAVLFNVIGL 376 >gi|148560485|ref|YP_001258960.1| putative toulene ABC transporter permease [Brucella ovis ATCC 25840] gi|148371742|gb|ABQ61721.1| putative toulene ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 365 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 151/364 (41%), Positives = 212/364 (58%), Gaps = 3/364 (0%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W S + + DD + I ++ + I+D+S I+ +DT GA LI ++ Sbjct: 3 VIHLSGHWISQSVH-LVDDKMRGIEQAGGDKATIIDISGISNLDTAGAWLIERLRQRLAA 61 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 K + E L+ + R+ F +G ++ ND Sbjct: 62 KHVDVRLKGVHEAWLPLMEEVGNAVERTLDIPRTKSPFFFIAFLNVLGGAVISMFNDFKM 121 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 HILG I +++ QM +GV +P+++L+S + GA+IAQQGA Sbjct: 122 AMHILGATIRGAQLKYGRGNGIPI--AAIVTQMDRMGVGAIPIIVLMSTIVGAIIAQQGA 179 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 FQL FGAEIF +DL+ IL LRE+GVLLTA+MIAGRSGSAI AEI SMK+ EE DA+ + Sbjct: 180 FQLRYFGAEIFVVDLVGILVLRELGVLLTAIMIAGRSGSAITAEISSMKMREETDALTVI 239 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ V +L+ PR+ AL++ LPLLTIL++ SA++GA+ V W Y +I F SR H L Sbjct: 240 GLNPVGVLVFPRLVALVVILPLLTILSDLSALVGAAGVSWLYSNISPEAFISRLHDAVAL 299 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 F GLIKAPFMA IGI+A EG VG + SLG++VT VV++I +VI++D LFA+F Sbjct: 300 NTYFAGLIKAPFMAMIIGILASVEGMKVGGSAESLGRRVTASVVKAIFVVIVVDGLFAMF 359 Query: 368 YFAI 371 Y AI Sbjct: 360 YAAI 363 >gi|254496222|ref|ZP_05109116.1| ABC transporter, permease [Legionella drancourtii LLAP12] gi|254354527|gb|EET13168.1| ABC transporter, permease [Legionella drancourtii LLAP12] Length = 375 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 99/373 (26%), Positives = 181/373 (48%), Gaps = 14/373 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60 + + F G W ++ + + + ++ V+ I+ +D+ GA ++ Sbjct: 11 DEELAQFNCTGRWSVMDVGSLLKKITA--STLPKTQKIKVNGEGISHLDSAGALALIKCV 68 Query: 61 -FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 +++ ++ L G S +QL LI +N Y +GK+ Sbjct: 69 NALKQRDNEVALVGFSKIQQQLLDLIQEKQGILDYQIP------SPPKENFLYKLGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + ++G + + + + +F S++ + G+ +P++ L+SF+ G Sbjct: 123 TKLAQVDGLIILIGDLATKLFDAFGNWRRF--QWPSIMSNIDATGIKALPILALLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL+ +GA F L + RE L+TA+++AGR+ SA A++GSMK+NE Sbjct: 181 VVLAYQMGLQLTTYGANSFIAYLSGMAIFREFAPLITAIIVAGRTSSAYTAQLGSMKVNE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ TMGL +L+ P++ L+I+ PLL A+ +I+G+ I+ I F F Sbjct: 241 EIDALLTMGLSPTELLVLPKVLGLLIAFPLLIFWADIFSILGSMIMANNMLGIGFLDFLQ 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN-SLGKKVTTCVVQSISIVI 358 R + ++ GL KAP A I +V +GF V + ++G + T VVQS+ ++I Sbjct: 301 RLRDSVGISQFKLGLYKAPAFALLIALVGCFQGFRVEAGTEKNIGSQTTKSVVQSLFLII 360 Query: 359 IIDSLFAIFYFAI 371 I D++++I Y + Sbjct: 361 IADAIYSIIYSWM 373 >gi|307720548|ref|YP_003891688.1| hypothetical protein Saut_0627 [Sulfurimonas autotrophica DSM 16294] gi|306978641|gb|ADN08676.1| protein of unknown function DUF140 [Sulfurimonas autotrophica DSM 16294] Length = 368 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 106/369 (28%), Positives = 180/369 (48%), Gaps = 13/369 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 F+G +++ + + NK S I++L+ +DT A + E+ Sbjct: 13 DGLSLDFSGELTLYNLTQAQNLIE--TNKLSNSQKIIINLANAQYLDTAFALFLTDIQEE 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 Y+ +I+ + L ++ N + ++ + GK + Sbjct: 71 YNAEIECNNKNFLHT--LELTREHKKRLDSNDDIHKK-------SIFEYFGKIFYESYLS 121 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G + + + S + + ++ V + +V L SF+ G V A Sbjct: 122 FISFMEFIGKIFISFLLYFKSIKNIRI--KEIAFEINESAVRALGIVALTSFLIGLVTAY 179 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL ++G IF +D+M I RE+ L+TA++IAGRSGSA A+IG+MKI +EIDA+ Sbjct: 180 QAAYQLQRYGGNIFIVDMMGISVFRELAPLITAIVIAGRSGSAYTAQIGAMKITQEIDAM 239 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RTMG D L+ PRI ALII LP+L +++ A++G IV D+ ++F +R Sbjct: 240 RTMGFDPYTFLVLPRIIALIIMLPILIFVSDMMAMLGGIIVADLSLDLIPSLFINRLSEV 299 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + + GL+K PF A I + + G V + S+G T VV+S+ VI+ D++F Sbjct: 300 VAIKHFYVGLVKGPFFAFLIASIGIYRGLMVKDDTQSIGFNTTKSVVESLFAVIVCDAIF 359 Query: 365 AIFYFAIGI 373 +I + +GI Sbjct: 360 SIAFTNLGI 368 >gi|225165545|ref|ZP_03727365.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2] gi|224800218|gb|EEG18628.1| protein of unknown function DUF140 [Opitutaceae bacterium TAV2] Length = 371 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 92/363 (25%), Positives = 172/363 (47%), Gaps = 19/363 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLS-AITEIDTIGAEL---I 58 + + R G W+ + + + ++L+ + +D+ I Sbjct: 24 DGDLLRIRLGGRWRVTA----PRPSLAGVIGDRKPRRIRIELAPNLERLDSALLLFTHEI 79 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + E++ +S + L + ++ + + + + NL IG+ Sbjct: 80 RSWCEQHKTDYDTSALSPEVAALCNKLATATQAEPAH---------DRRTNLLTSIGEAT 130 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++ ++ + LG + + KF+ +M G +P+V LISF+ Sbjct: 131 IETVDRATGIMSFLGECLLSFFHLARRPRKFR--WGDCSEEMQQCGAMALPIVGLISFLV 188 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A Q A + QFGA+I+ D ++++ RE+G ++T +++AGR+G+A A IG+MK N Sbjct: 189 GVIMAYQSAVLMRQFGADIYVADAVALVMAREMGAMMTGIILAGRTGAAFAATIGNMKAN 248 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ T G+ V L+ PR+ AL + +PLLT+ AN I+G V DIP ++ Sbjct: 249 EEIDALSTFGIRPVDFLVLPRLVALALMMPLLTLYANALGIVGGMGVAMGVLDIPPITYW 308 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + L++I TGLIKA +G+ G ++ +G+ T+ VV + ++I Sbjct: 309 NQTVNALDLSDISTGLIKASCFGILVGLSGCHRGMNADRSASGVGRAATSAVVIGMLLII 368 Query: 359 IID 361 I D Sbjct: 369 IAD 371 >gi|197105491|ref|YP_002130868.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1] gi|196478911|gb|ACG78439.1| ABC transporter, permease protein [Phenylobacterium zucineum HLK1] Length = 375 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 111/371 (29%), Positives = 186/371 (50%), Gaps = 11/371 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+W + + + A++ + +DLS + +DT GA ++ Sbjct: 14 DRPTVALTGDWTARALGGAGTALAEALDGLT---NIAIDLSGVRRLDTAGAYAVVRAAGP 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 K + +L ++ R +P F +L +GK +V F +D Sbjct: 71 AFDASK-VEARPEVRRLLEVVDEAARI-----QPAVRQEPKGFHDLTIRVGKGVVGFGHD 124 Query: 125 SCSQAHILGLVISNTGEFCASSY--KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 LG ++ + K +L+ M G+ +PVV + +F GAV+ Sbjct: 125 FIDTMGFLGHLLVVLARSLVLLFVNPRKIRWPALVSIMERAGLDAIPVVAVATFFIGAVV 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A GA L QFGAE+F+++L+ I +RE +++TAV++AGRS S+ AEIGSMK+++EID Sbjct: 185 AFIGADMLQQFGAEVFAVELIGISMMREFNIVITAVLLAGRSASSFAAEIGSMKMSQEID 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MG+D L+ PR AL+I++PLLT +A + ++G +V W + A F R Sbjct: 245 AMKVMGIDPFEALVFPRFAALLITIPLLTFVATLAGLLGGIVVTWSVLGLGPAFFLQRIV 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + + L KAP MA I + ++G G SLG++VT VV +I +I+ID+ Sbjct: 305 DNVGVDHFWIALSKAPVMAGVIAGIGCRQGLETGGDVESLGRRVTAAVVHAIFAIIVIDA 364 Query: 363 LFAIFYFAIGI 373 +FA+ Y +G+ Sbjct: 365 IFAMIYMELGL 375 >gi|170743041|ref|YP_001771696.1| hypothetical protein M446_4933 [Methylobacterium sp. 4-46] gi|168197315|gb|ACA19262.1| protein of unknown function DUF140 [Methylobacterium sp. 4-46] Length = 394 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 123/369 (33%), Positives = 200/369 (54%), Gaps = 4/369 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 R G+W + + + VDLS + +DT+GA ++ + Sbjct: 30 DGVQARLTGSWTADQAPAVEAAAAAIAAPGEPGPRVQVDLSGLVRLDTLGAFVLERTRSE 89 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + + L+ ++ + +G + + + Sbjct: 90 IEAAGRAVDYAGARPEHRILLREVAYRRDTPP--PPRRRRLGLLDGLEALGAGLRRLGAE 147 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S LG V++ A +F+ S + QM + G P+++LI+F+ G ++ Q Sbjct: 148 GLSWLGFLGEVVAACLRVLARPRRFRA--ASFVNQMEQIAYRGTPIIMLIAFLVGCIVTQ 205 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG QL +FGA+ F ++++ IL LRE+GVLLTA+M+AGRSGSA AEIGSM++ EE+DA+ Sbjct: 206 QGIIQLQRFGAQSFVVNMIGILTLRELGVLLTAIMVAGRSGSAFTAEIGSMRMREEVDAL 265 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MGLD + ILI PRI AL+++LP+L LA+ +A++G ++ Y ++ F F +R + Sbjct: 266 RVMGLDPIEILIVPRILALMLALPMLGFLADVAALLGGALTSMAYGNLSFDAFLARLQAV 325 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ + G++KAPFMA IGI+A EGF V + SLG+ VT VV+SI +VI++D +F Sbjct: 326 ISVRHGLVGMLKAPFMALIIGIIATSEGFRVEGSAESLGRHVTASVVKSIFMVIVLDGVF 385 Query: 365 AIFYFAIGI 373 AIF+ AI + Sbjct: 386 AIFFAAIDL 394 >gi|255019625|ref|ZP_05291705.1| ABC-type transport system involved in resistance to organic solvents, permease component [Acidithiobacillus caldus ATCC 51756] gi|254970928|gb|EET28410.1| ABC-type transport system involved in resistance to organic solvents, permease component [Acidithiobacillus caldus ATCC 51756] Length = 380 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 102/365 (27%), Positives = 171/365 (46%), Gaps = 13/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G W ++ D V + ++ + DL AI +D++GA +I Sbjct: 26 LTLRGRWTLRRLTGAMDRVREQLAQAGRGRP--WDLRAIERLDSVGALVIWRAWG----- 78 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 GV +L + R+ + Q P +G I+ + D Sbjct: 79 ----GVLPADARLSAEQEAVFRRFAQMQTPTAPRRPWGLWARLDALGAHILGVLVDLWGL 134 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG +++ F + + G +P++ LI F+ G VI+ Q A Sbjct: 135 FLLLGALLTELWRALRHPRHFP--WREISATVVRTGPDSLPILSLIGFLIGIVISFQSAP 192 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ +GA I+ I + + LRE G L+TAV++AGR+GSA A+IG+M++ EE+DA+RT G Sbjct: 193 TLASYGANIYIISIAGLSILREFGPLITAVILAGRTGSAFTAQIGAMRVTEELDALRTFG 252 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + V+ LI P++ AL I+LPLL + + AI+GA IV I + F Sbjct: 253 ISPVQRLILPKVIALAITLPLLVVWTDAVAILGAIIVAKLDLGISASFFLREMPIMVPDF 312 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N + G+ K I V+ G V +++SL ++ T VV ++++VI+ID++ A+ + Sbjct: 313 NFWLGIGKGILFGILIAWVSGYHGLKVQPNTDSLSRETTDSVVLTLTLVIVIDAVLAMVF 372 Query: 369 FAIGI 373 GI Sbjct: 373 ANTGI 377 >gi|91776717|ref|YP_546473.1| hypothetical protein Mfla_2365 [Methylobacillus flagellatus KT] gi|91710704|gb|ABE50632.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT] Length = 373 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 96/370 (25%), Positives = 175/370 (47%), Gaps = 11/370 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-FME 63 G G W + ++ A+ + A DL+ + ++DT GA ++ + Sbjct: 14 GGKRIVLNGQWSLRALDNDFAELRRALKPYFSDEKAQWDLTQVEQLDTAGAAVLWNGWQG 73 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K G++ ++ LF ++ + + P+ + L GK + + Sbjct: 74 KMEGRVT---LTDEQVALFDTLASIETTTVAEKPPRFD-----WLKLVAGFGKLTIFISS 125 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++GL++ G F +Y GV+ +PV L+ F+ G ++ Sbjct: 126 HVVDFVKLIGLLVLELGYLLRRPQDFP--WREFSANIYKSGVTALPVTALLGFMIGIAMS 183 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA+IF ++++ + +RE+G +L AV++AGRSGS++ A+IG M++ EEIDA Sbjct: 184 YLMATQLRTFGADIFIVNILGLAVIRELGPILMAVLVAGRSGSSMAAQIGVMRVTEEIDA 243 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + TMG+ + ++ P++ L + P L I + A++G ++ + F FF + Sbjct: 244 LATMGISRILRVVLPKVLGLTVIAPFLVIWTSCWALLGGALSANIELGLGFRFFFDYLAA 303 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 NI GLIK + ++A G + ++ SL + T+ VV +I+ VI+ID+ Sbjct: 304 VVQPVNITLGLIKGVMFGFIVAVMACHFGLRIKPNTESLSRSTTSSVVTAITCVILIDAA 363 Query: 364 FAIFYFAIGI 373 FAI IG+ Sbjct: 364 FAIITSGIGV 373 >gi|329905881|ref|ZP_08274264.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480] gi|327547452|gb|EGF32273.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480] Length = 372 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 175/368 (47%), Gaps = 15/368 (4%) Query: 7 TVFRFAGNWKSPEISE--IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 +V +G W+ +++ + + A+ + + DL+ IT ID IGA+ + K Sbjct: 17 SVIVASGAWQVHALADAGVIGQLDAALARLTKPTG--WDLTQITAIDHIGAQWLWNVWGK 74 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + +S ++ F + + + R +G + Sbjct: 75 TRPPGLV--LSDRQDEFFQRLEQAGPLTLPEVQKPRWKQ-------LIRLGARTQSLTGH 125 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG ++ + F + +G + +Y G + + L+ + G V++ Sbjct: 126 LIDVVGLLGQLMFDLRRFALNPR--RGPWKEISSNIYRTGYQALGITALVGMLIGVVLSY 183 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FG +I+ ++++ + +RE+G LL A+++AGRSGS+I A++G M++NEE+DA+ Sbjct: 184 LSAQQLHSFGGDIYLVNILGMSIIRELGPLLAAILVAGRSGSSITAQLGVMRVNEELDAM 243 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MGL LI P++ AL I++PLL I + A++G + + F + Sbjct: 244 LVMGLPHGFRLIMPKVLALAIAMPLLVIWTDAMALLGGMVAANLELGLSPRYFLHKLPDA 303 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 LAN + G+ K I +VA GF + ++ SLG T+ VV +I++VI+ D++F Sbjct: 304 VPLANYWIGIGKGVVFGGLIALVACHFGFRIKANTESLGAGTTSSVVTAITVVILADAVF 363 Query: 365 AIFYFAIG 372 AI + +G Sbjct: 364 AIVFSGVG 371 >gi|150396764|ref|YP_001327231.1| hypothetical protein Smed_1554 [Sinorhizobium medicae WSM419] gi|150028279|gb|ABR60396.1| protein of unknown function DUF140 [Sinorhizobium medicae WSM419] Length = 379 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 149/371 (40%), Positives = 213/371 (57%), Gaps = 10/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + F+G+W+ ++ + + D S IT +DT GA +I F Sbjct: 18 AAGNGRRYVFSGDWRHETAEAMSAKLKRL--GKPAGGQSEFDFSGITAMDTAGAWIIRRF 75 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 M +++ G + E + +L + F+ L +G+ V Sbjct: 76 MNGTADEVRFAGSDRYAELILALPKQLR------SPEGETARAPLFQRLFAPVGELTVSI 129 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 D+ + +ILG + +++ Q+ +GV P++ L+SF+ GA+ Sbjct: 130 WTDTVAAMYILGSAVRGAQMKLGRHAGVSP--AAIVHQIDRMGVMATPIITLMSFLIGAI 187 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IAQQGAFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI AEIGSMK+ EE+ Sbjct: 188 IAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSMKMREEV 247 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MGL + +L+ PR+ AL I LPLLTI+ANF+A+ GA++V W Y I F +R Sbjct: 248 DALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARL 307 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ G+IKAPFMA IG+VA EG VG + SLG++VT+ VV+SI +VI+ID Sbjct: 308 QEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILID 367 Query: 362 SLFAIFYFAIG 372 LFAIFY AI Sbjct: 368 GLFAIFYAAID 378 >gi|308272474|emb|CBX29078.1| hypothetical protein N47_J00590 [uncultured Desulfobacterium sp.] Length = 381 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 108/368 (29%), Positives = 181/368 (49%), Gaps = 8/368 (2%) Query: 1 MSEN--GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 +SE+ G F G + I ++ ++ S+ S DL ++ D G ++ Sbjct: 14 ISEDKEGFFTIHFHGEMDAQSSPGIIGKLLGEVD-SLSLLSITADLDDVSYFDDFGLLVL 72 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + K V+ + + +++ + ++ N + +G+ + Sbjct: 73 IELQKAAKNKNSSFNVTDNSGKAKNILYLL---ESNFERSVLPAKQNRLQLKITQLGESV 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + I++S +G V + + C + I M GV+ +P++ LISF+ Sbjct: 130 LDNISNSRVFVSFIGSVALSFYQICRHPKSLRIN--DTILHMEKTGVNALPIIALISFLL 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G VIA + QL QFGA ++ L+SI + E+G ++TA++IAGRSGSA AEIG+MKI+ Sbjct: 188 GLVIAFMSSLQLEQFGANLYVASLVSIGMVSELGPIMTAIVIAGRSGSAFAAEIGTMKIS 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE DA+ MG D L PRI A II +PLLT+ A+ AI G +V D+ + + Sbjct: 248 EETDALFVMGFDPTLFLAVPRILASIIVVPLLTLFADIFAIAGGLVVGVFILDLTTSSYL 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + L I G+ K+ A I V GF ++++G T+ VV SI ++I Sbjct: 308 TQTMNVLNLFEICWGISKSIVFAVIISWVGCLRGFQTKGGADAVGNAATSAVVSSIFLII 367 Query: 359 IIDSLFAI 366 +IDS+FAI Sbjct: 368 LIDSMFAI 375 >gi|57505618|ref|ZP_00371545.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis RM3195] gi|57016165|gb|EAL52952.1| conserved hypothetical integral membrane protein [Campylobacter upsaliensis RM3195] Length = 377 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 101/338 (29%), Positives = 165/338 (48%), Gaps = 10/338 (2%) Query: 39 SAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 I+D + ID G + ++K + +S + LF L +++ +K Sbjct: 47 QCILDFHHLEFIDMAGVRFFLALEYELQKRGITSQRVHLSEKFDALFELCEKNYQRILKE 106 Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 K L ++G + + +G + + F+ ++ Sbjct: 107 PKKHFDT-----AELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQCFKKPKTFR--FVA 159 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + + + +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I RE+ L+ Sbjct: 160 FLYHIENSALKALPIVILTALLVGVVLAYQTAFQLAQFGANIFIVDLVGISATRELAPLI 219 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++IAGRS S+ A+IG MKI +EI A+ TMG +I PR+ AL++++PL+ +++ Sbjct: 220 AAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVVALVVAMPLIVAVSD 279 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F +I G +V DI F F RF L ++ GLIKAP IG++A G V Sbjct: 280 FVSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEV 339 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G T VV +I VI D+LF++ +GI Sbjct: 340 KHTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 377 >gi|52842264|ref|YP_096063.1| ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629375|gb|AAU28116.1| ABC transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 374 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 109/374 (29%), Positives = 184/374 (49%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E ++ G+W + + + + S ++ I+ D+ GA + Sbjct: 11 EQKNATYQCCGSWSVLTLDGLPKKF--STSPLPDSQQITINGEKISAFDSAGALALKKCI 68 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +I+L S +Q+ LI + + Y IGK+ Sbjct: 69 DELKKRNNQIELVNFSDSQQQMLELIESKQDILSYQLPAVSK------EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F S Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|54297975|ref|YP_124344.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris] gi|53751760|emb|CAH13182.1| hypothetical protein lpp2030 [Legionella pneumophila str. Paris] Length = 374 Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 108/374 (28%), Positives = 185/374 (49%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E ++ G+W + + +I+ S ++ I+ D+ GA + Sbjct: 11 EQKNATYQCCGSWSVLTLDGLPKKF--SISPLPDSQQITINGEKISVFDSAGALALKKCI 68 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +++L S +Q+ LI + + Y IGK+ Sbjct: 69 DELKKRNNQVELVNFSDSQQQMLELIESKQEILSYQLPAVSK------EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F + Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|114332197|ref|YP_748419.1| hypothetical protein Neut_2236 [Nitrosomonas eutropha C91] gi|114309211|gb|ABI60454.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91] Length = 381 Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 173/372 (46%), Gaps = 12/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G + + G++ ++ V + + DL+ I ++D GA ++ Sbjct: 18 TEAGNSCLQLTGSYTLVSLNPSLPAVARELAQLASQPGLYWDLTNIHQLDYAGAVMLWQI 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + L + EQ+F + Q+ +G+++++F Sbjct: 78 WGEQRPDHLL--LRPEQEQMFQRLEKVVSLPEPTQRKWFLP--------VSLLGQQLLRF 127 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + G ++ + + + +Y G + + ++ F+ G V Sbjct: 128 FDHLAGMISLSGQIVLDIVYLMTHPSRIPV--REISANLYRTGAQALGITAIVGFLIGIV 185 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ + QL GA+I+ ++++ + +RE+G +L A+++AGRSGSA+ A++G M++ EE+ Sbjct: 186 LSYLSSEQLHMLGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVTEEL 245 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ L+ +I L ++LPL+ + + A++G + + + Sbjct: 246 DALTVMGIPHSLRLVLSKIIGLSLALPLIVLWTSSVALLGGLLAADLQVGLSIRYAVTTL 305 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +AN++ GL K AI ++A G + ++ SLG+ T VV SI+ VIIID Sbjct: 306 PDAVPIANLWLGLGKGVVCGMAIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVIIID 365 Query: 362 SLFAIFYFAIGI 373 ++FA+ + +IGI Sbjct: 366 AIFAVAFSSIGI 377 >gi|332162490|ref|YP_004299067.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666720|gb|ADZ43364.1| ABC transporter, membrane permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 354 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 114/340 (33%), Positives = 180/340 (52%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 ++ Q S + DL+ + +DT GA L+ + + E+ +L+ R Sbjct: 16 RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + + + G+ + D S +GL + +++ Sbjct: 76 PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEALFSTIFRPSRWRM- 134 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 135 -TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +V DI +F S ++ L + G+ KAP A I I+ EG Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353 >gi|107023833|ref|YP_622160.1| hypothetical protein Bcen_2286 [Burkholderia cenocepacia AU 1054] gi|105894022|gb|ABF77187.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU 1054] Length = 425 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 33/366 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ V I + DLS I +D +G + + + Sbjct: 92 TVRLTGQWTALSLARNRGAVARRIASIAAGRVSEWDLSGIERLDHVGGQALWRVWGRKLP 151 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R ++ L G I F Sbjct: 152 AGVALSATQ-----RTIFERIERLDSEREAPERIVRFDPVTRL----GLAIFAFGEHLQG 202 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 203 GITMFGRVILDALSVLRRPKTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 260 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 261 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 320 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ + Sbjct: 321 GIPHGLRLILPRVLALGVAMPLLVMWTNIIAL----------------------PGVVPI 358 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 359 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAIL 418 Query: 368 YFAIGI 373 + +G+ Sbjct: 419 FQNVGL 424 >gi|315453380|ref|YP_004073650.1| ABC transport system permease protein (pseudogene) [Helicobacter felis ATCC 49179] gi|315132432|emb|CBY83060.1| putative ABC transport system permease protein (pseudogene) [Helicobacter felis ATCC 49179] Length = 369 Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats. Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 8/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 GNW ++ + + + + VD + +D + L+ + + Sbjct: 12 TLFLRGNWDFKTPAQTLLRLEKLLKNAPPIRA--VDFREVERLDFVFLMLLYDLLGR--K 67 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 K + + + + ++ ++ + S N +G+ IV F N + Sbjct: 68 KPAILNANAYNAHVLEVVQHWVKEDPSILSREHSKPPK--INPLNKLGQSIVDFFNTMLN 125 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G+V+ G L LI ++ G +PV IL FV G IA QGA Sbjct: 126 TFNFCGMVLYFLGRAIIKPKTL--CLTPLIHHIHESGFKVLPVSILTVFVVGFAIALQGA 183 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL Q G + SI++ + L LRE+G + +++AGRS S+ A+IG MKI EE+DA+ TM Sbjct: 184 IQLQQLGFPLMSIEMTAKLALREMGPFILTLVVAGRSASSFTAQIGVMKITEELDAMHTM 243 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL L+ PR+ AL+I +PL+ +A+ A++G + I + F + +R H L Sbjct: 244 GLSPFAWLVLPRVLALVIVMPLMVFIADAFALLGTMVAIKYQLGVTFNHYIARLHENVGL 303 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ F GLIKAPF AI IV GF V + S+G T VV ++ +I +++LF++ Sbjct: 304 SHFFVGLIKAPFWGFAIAIVGCMRGFEVKGDTESIGTLTTISVVNALFWIIFLNALFSVI 363 Query: 368 YFAIGI 373 + + I Sbjct: 364 FSKLNI 369 >gi|323524591|ref|YP_004226744.1| hypothetical protein BC1001_0219 [Burkholderia sp. CCGE1001] gi|323381593|gb|ADX53684.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001] Length = 389 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 + R +G W + ++ + + DLS I +D +G + + Sbjct: 31 IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +L I + +L+ + + +G I F+ Sbjct: 91 RMPPDTELTDTQRDIFERIALLDTVRETAEPVVRF----------DPFTRLGLAIFSFLE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + G V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HLYGGVAMFGRVVLDLLAIARKPAITP--WTEISANVYNAGTKALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ T+ VV SI+IVI+ D++ Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTSSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|318606570|emb|CBY28068.1| ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A [Yersinia enterocolitica subsp. palearctica Y11] Length = 354 Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats. Identities = 114/340 (33%), Positives = 180/340 (52%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 ++ Q S + DL+ + +DT GA L+ + + E+ +L+ R Sbjct: 16 RASQPQSVVFDLTQLGALDTAGATLLALLLGDERINHLRELAPKLPEERRTLLETVSRVL 75 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 + + + G+ + D S +GL + +++ Sbjct: 76 PDLASESSEKPPSFWLEFLANTGRSVDNLWQDIKSLLGFVGLTLEVLFSTIFRPSRWRM- 134 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 SLI + +G++ VP+++L++F+ GAVIA GA L+ FGA IF++DL+ LRE Sbjct: 135 -TSLIANIQQIGLNAVPIIMLLTFLVGAVIAFLGATVLTTFGAGIFTVDLVVFSFLREFA 193 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA AEIG MK NEEIDAI+T+GL+ V +L+ PR+ AL+ISLP+LT Sbjct: 194 VLLTAILMAGRTASAFTAEIGLMKANEEIDAIQTLGLNPVELLVLPRVLALLISLPMLTF 253 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I G +V DI +F S ++ L + G+ KAP A I I+ EG Sbjct: 254 IGMICGIFGGMVVCALALDISPTMFLSIMQNSNGLQHFLVGISKAPIFAFLIAIIGCLEG 313 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G TT VV SI +VI++D++ A+F+ +G Sbjct: 314 FKVTGSAESVGVHTTTSVVHSIFVVILLDAVAALFFMEMG 353 >gi|83720699|ref|YP_440931.1| ABC transporter permease [Burkholderia thailandensis E264] gi|83654524|gb|ABC38587.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 404 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R +G W + ++ +V I + + DLS + +D +G + + + Sbjct: 49 TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALWRVWGRRLP 108 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 L + + + + + G+ + F Sbjct: 109 AGI---------ALTDNQRTVFERIERLDAGREAPEPVVRIDPVTRFGQGLFTFGEHLYG 159 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG +I + + +Y G +P+ L++F+ G V++ A Sbjct: 160 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 217 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 218 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 277 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 278 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 337 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 338 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 397 Query: 368 YFAIGI 373 + +G+ Sbjct: 398 FQNVGL 403 >gi|289208500|ref|YP_003460566.1| hypothetical protein TK90_1322 [Thioalkalivibrio sp. K90mix] gi|288944131|gb|ADC71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix] Length = 382 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 185/370 (50%), Gaps = 16/370 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQS--DSAIVDLSAITEIDTIGAELIMYF---ME 63 + +G + + + + + + +D+ + D GA L+ +E Sbjct: 24 LQLSGRLDVHAVERVWSPLRRRARELAEGTQAAVTLDVGGLEYCDGAGAALLHALERDIE 83 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +++L GV +E+ + + + + L + + + Sbjct: 84 RAGRQVELVGVQGLVEEQLTPYRELETVE--------PARHETRGGLLAQSFEAVSRVGQ 135 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + SQ +G + G + + + R G +P+V LI+F+ G ++A Sbjct: 136 AAYSQFGFIGELTRALGSALLNPRQVR--WGDTFRVAEAAGFQALPIVSLIAFLLGVILA 193 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A + QFG EIF +L+++ RE+G L+ A+++AGRSG+A AEIG+MK+NEE++A Sbjct: 194 FQSAIAMRQFGGEIFVANLVAVSLFRELGPLMMAILLAGRSGAAFAAEIGTMKVNEEVNA 253 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TMGLD VR L+ P++ A I+ PLL + AN ++GA++V+ + IP+ FF++ Sbjct: 254 LKTMGLDPVRFLVLPKVLAGILVAPLLALYANMIGLLGAAVVMQGFG-IPWTAFFNQVTV 312 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +L+++F+GL KA I V G + ++G T+ VV SI ++++ D L Sbjct: 313 ALSLSDLFSGLFKAVIFGLLIAGVGCLRGLQTASGAAAVGISTTSAVVTSIILIVVFDGL 372 Query: 364 FAIFYFAIGI 373 FA+ ++ +G+ Sbjct: 373 FAVLFYHMGV 382 >gi|33594879|ref|NP_882522.1| putative integral membrane protein [Bordetella parapertussis 12822] gi|33564955|emb|CAE39902.1| putative integral membrane protein [Bordetella parapertussis] Length = 378 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 10/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W ++ + + DL + +DTIGA L+ + Sbjct: 23 VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + S ++F + + + P + IG + + + Sbjct: 83 --ERVRWSDGQREVFQTLQRNRGEALPAPAPADRW------GWLRAIGDAVFDAGRNGRA 134 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G ++ + G F +G + Q+Y G + + L+ F+ G V++ A Sbjct: 135 LIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSA 192 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ M Sbjct: 193 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVM 252 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + LI PR+ AL I++PLL + + A++G + + F + +L Sbjct: 253 GISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAISL 312 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N + G+ K I +VA G + ++ SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 313 TNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAVI 372 Query: 368 YFAIGI 373 + +IGI Sbjct: 373 FSSIGI 378 >gi|33599154|ref|NP_886714.1| putative integral membrane protein [Bordetella bronchiseptica RB50] gi|33575200|emb|CAE30663.1| putative integral membrane protein [Bordetella bronchiseptica RB50] Length = 378 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 10/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W ++ + + DL + +DTIGA L+ + Sbjct: 23 VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 82 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + S ++F + + + P + IG + + + Sbjct: 83 --ERVRWSDGQREVFQTLQRNRGEALPAPAPADRW------GWLRAIGDAVFDAGRNGRA 134 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G ++ + G F +G + Q+Y G + + L+ F+ G V++ A Sbjct: 135 LIIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSA 192 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ M Sbjct: 193 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVM 252 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + LI PR+ AL I++PLL + + A++G + + F + +L Sbjct: 253 GISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAISL 312 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N + G+ K I +VA G + ++ SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 313 TNYWIGMFKGVSFGVLIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAVI 372 Query: 368 YFAIGI 373 + +IGI Sbjct: 373 FSSIGI 378 >gi|301057238|ref|ZP_07198367.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300448689|gb|EFK12325.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 352 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 107/360 (29%), Positives = 183/360 (50%), Gaps = 12/360 (3%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQ 72 S + ++ ++ D VDL +T +D G +++ + K HG L+ Sbjct: 2 DSNNAGSLIQELSQHFAENPPGD-LTVDLENVTYLDDFGTLVLVELRKLAAKEHGAFNLE 60 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 I ++ ++F + + SF + + +G+K I D + Sbjct: 61 NTGKKIREMLMFLNF------DSLFQKVSFEKKRRQGIFVRLGEKTFDIILDLKYAISFI 114 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + G A + + M GV G+P+V LISF+ G ++A + QL Q Sbjct: 115 GAITLSLGYHLAHPRALRK--DDTLDYMQKTGVDGLPIVALISFLMGLIMAFMSSVQLEQ 172 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA I+ L+S+ RE+G ++TA+++AGRSGSA AEIG+MKI+EE+DA+ TMG D V Sbjct: 173 FGANIYVASLVSLAMTRELGPIMTAIIVAGRSGSAFAAEIGTMKISEEVDALYTMGFDPV 232 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ P++ A +I +P+LT+ ++ AI G +V D+ + ++ +T L ++F Sbjct: 233 GFLVIPKLIAALIMVPILTLFSDIFAIAGGLLVGVFMLDLTVGAYVAQTINTLALFDVFW 292 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G++K+ A I V GF V + S+G+ T+ VV SI ++I+ DS+F++ G Sbjct: 293 GVLKSGVFALLITWVGCLRGFQVSGGAASVGQATTSAVVSSIFLIILFDSVFSVVLRYTG 352 >gi|296388302|ref|ZP_06877777.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] Length = 343 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 177/340 (52%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 +S + +A DLS + +DT GA L+ + + + +L+ Sbjct: 5 RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPGLPRERQALLKTVGHAL 64 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 +P++ + L IG + F + +GL + ++ Sbjct: 65 HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWRV- 123 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE Sbjct: 124 -TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I+G V DIP A+F S + + G+ KAP A I ++ EG Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342 >gi|313108528|ref|ZP_07794529.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|310881031|gb|EFQ39625.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 343 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 2/340 (0%) Query: 33 KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 +S + +A DLS + +DT GA L+ + + + + +L+ Sbjct: 5 RSEVAGNASFDLSQLGALDTAGAALLAELLGAERLADLAELEPSLPRERQALLKTVGHAL 64 Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 +P++ + L IG + F + +GL + ++ Sbjct: 65 HDFCEPEKPKPPTTAIELLARIGCAMETFWLHLKALLGFIGLTLETLLRSLVRPASWRV- 123 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L+ + G+ VP++ L++F+ GAVIA GA L+ FGA I++++L+ LRE Sbjct: 124 -TPLVANIEKSGLDAVPIIALLTFLVGAVIAFLGATVLANFGATIYTVNLVVFSFLREFA 182 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 VLLTA+++AGR+ SA A+IGSMK NEEIDAIR +GL+ + +L+ PR+ AL++SLP+LT Sbjct: 183 VLLTAILMAGRTASAFTAQIGSMKANEEIDAIRALGLNPIELLVLPRVLALLVSLPMLTF 242 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + I+G V DIP A+F S + + G+ KAP A I ++ EG Sbjct: 243 VGMLCGIVGGMTVCAWTLDIPPAMFLSIMEDGIGVQHFLVGISKAPLFAFLIAVIGCLEG 302 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 F V + S+G+ TT VV SI +VI++D+L A+F+ +G Sbjct: 303 FKVSGSAQSVGEHTTTSVVHSIFVVILLDALAALFFMEMG 342 >gi|54294946|ref|YP_127361.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens] gi|53754778|emb|CAH16265.1| hypothetical protein lpl2025 [Legionella pneumophila str. Lens] Length = 374 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 109/374 (29%), Positives = 183/374 (48%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E ++ G+W + + + S ++ I+ D+ GA + Sbjct: 11 EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +I+L S +Q+ LI + + Y IGK+ Sbjct: 69 DELKKRNNQIELVNFSDSQQQMLELIESKQEILSYQLPAVSK------EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F S Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|154149262|ref|YP_001406165.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381] gi|153805271|gb|ABS52278.1| ABC transport system permease [Campylobacter hominis ATCC BAA-381] Length = 367 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 114/371 (30%), Positives = 177/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQ-SDSAIVDLSAITEIDTIGAELIMYFM 62 NGI F GN+ +IA + + SI+ S+ I++ + D A I + Sbjct: 8 NGILNIFFNGNFDYKLNPKIAHNFKNIVKNSIKNSEKIILNFKDVENFDYFFAVFIKKSL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K + ++ + I+++F + + ++K N IG + Sbjct: 68 IKAN--YEIINENEKIKKIFKTLENADFSENIHKKN-----INFIIKTLNEIGIATIDAK 120 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + +G + L + G+ V +V L +F+ G V+ Sbjct: 121 KNLTNLTSFMGEFFIKFFALTPKKMR----LKEMSNCAKDAGIDAVFIVSLTAFLVGIVL 176 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A G+ L+QFGA I+ ID+M +L LREI L+ A++IAGRS S+ A+IG MKI EEID Sbjct: 177 AYIGSDMLAQFGASIYIIDIMGMLTLREIAPLIAAIVIAGRSASSFTAQIGVMKITEEID 236 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++TMG D L PRI A+II P + LA+ +I IV Y +I FA + RF Sbjct: 237 AMKTMGFDPFYFLCMPRILAMIIITPFVIFLADAVSIFSQMIVCDAYLEISFADYLERFK 296 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ST + + G++KAPF I IV GF V + S+G+ T VV +I VI +D+ Sbjct: 297 STIEIRHFLVGIVKAPFFGAIIAIVGCLRGFEVKNDTQSIGEYTTISVVNAIFWVIALDA 356 Query: 363 LFAIFYFAIGI 373 FA+ + + I Sbjct: 357 FFAVMFSELKI 367 >gi|71906845|ref|YP_284432.1| hypothetical protein Daro_1206 [Dechloromonas aromatica RCB] gi|71846466|gb|AAZ45962.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB] Length = 368 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 94/365 (25%), Positives = 165/365 (45%), Gaps = 13/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G W E+ + + + DLSA+T +D+ A L+ Sbjct: 14 VVLSGAWTLAEMLPMLSFLQAELTNQSHHTR-HWDLSAVTRLDSAAAVLLWRTWGGQWPA 72 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 V + ++ R+ + P+ +L IG + K + + Sbjct: 73 SL--DVDEMHRAVLVRVAELPREMPEQVLPR--------VHLPEFIGVLLFKALANVRGM 122 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G ++ + +Y G +PV L+ F+ G I+ A Sbjct: 123 VALFGQLLLDCAYLFRHPKDVP--WREFTSNVYKAGALALPVTALVGFLIGVTISYLSAL 180 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA++F ++++ I +RE+G +L AV++AGRSGSA+ A+IG M++ EEIDA+ TMG Sbjct: 181 QLKSFGADLFIVNILGISIIRELGPVLVAVLVAGRSGSAMTAQIGVMRVTEEIDALSTMG 240 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + ++ P+++ L +++PLL + + A+ G + D+ F +A Sbjct: 241 ISRSIRVVLPKVFGLTVAMPLLVLWTSAVALFGGMLAALMQLDLSLIYFLENLPRAVPVA 300 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+F GL K +VA G V ++ SL T+ VV +I+ VI++D++FAIF Sbjct: 301 NLFIGLGKGLVFGFVTAVVACHFGLHVKPNTESLSANTTSAVVTAITSVILVDAIFAIFT 360 Query: 369 FAIGI 373 IG+ Sbjct: 361 RQIGV 365 >gi|307610778|emb|CBX00391.1| hypothetical protein LPW_21111 [Legionella pneumophila 130b] Length = 374 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 109/374 (29%), Positives = 183/374 (48%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E ++ G+W + + + S ++ I+ D+ GA + Sbjct: 11 EQKNATYQCCGSWSVLTLEGLPKKFI--TGSLPDSQQITINGEKISAFDSAGALALKKCI 68 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +I+L S +Q+ LI + + Y IGK+ Sbjct: 69 DELKKRNNQIELVNFSDSQQQMLELIESKQDILSYQLPAVSK------EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F S Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|302382565|ref|YP_003818388.1| hypothetical protein Bresu_1453 [Brevundimonas subvibrioides ATCC 15264] gi|302193193|gb|ADL00765.1| protein of unknown function DUF140 [Brevundimonas subvibrioides ATCC 15264] Length = 372 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 106/373 (28%), Positives = 185/373 (49%), Gaps = 12/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G +V R G+W + + A + ++ VDLS + DT GA ++ Sbjct: 11 ATGGGSVLRLTGDWTTMSLGRTAARLSDGLSGRTIQ---SVDLSGLGRFDTAGALALVQA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +++ ++ RK + + S + +G + Sbjct: 68 SG-LTLPKDAWQSRPEAGRIYDMVETLERKSMPAPR-----RQASLTRIFARMGHGVHDA 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG +++ TG + + + Q G+ +P++ + +F GAV Sbjct: 122 AAEFLLSMAFLGRLMAATGNAVRHPGAIR--WPAWVSQAERSGLDAMPIIAVTNFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IA GA L+QFGA +F++DL+ + LRE+ VL+TA+++AGRS S+ AE+GSM++N+E+ Sbjct: 180 IAFLGADLLTQFGAGVFAVDLIGVSILRELAVLITAILLAGRSASSFAAEVGSMRMNQEV 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+D + L+ PR+ A+++ +PLLT + + + G IV W + A F R Sbjct: 240 DAMQVMGVDPFQALVIPRLAAMLVMVPLLTFVGMIAGLFGGLIVTWSQLALGPAFFLQRM 299 Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 T ++ GL KAP A I + ++G AV SLG++VT VVQ+I +I + Sbjct: 300 VDTPDMFTHMLVGLSKAPVFAIVIAAIGCRQGLAVSGDVESLGRRVTAAVVQAIFAIIFL 359 Query: 361 DSLFAIFYFAIGI 373 D++FA+ Y + I Sbjct: 360 DAVFALIYLELDI 372 >gi|148359621|ref|YP_001250828.1| ABC transporter permease [Legionella pneumophila str. Corby] gi|296107663|ref|YP_003619364.1| putative ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] gi|148281394|gb|ABQ55482.1| ABC transporter, permease [Legionella pneumophila str. Corby] gi|295649565|gb|ADG25412.1| putative ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] Length = 374 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 107/374 (28%), Positives = 183/374 (48%), Gaps = 13/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E ++ G+W + + + S ++ I+ D+ GA + Sbjct: 11 EQKNATYQCCGSWSVLTLEGLPKKFI--TGPLPDSQQITINGEKISVFDSAGALALKKCI 68 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 ++K + +++L S +Q+ LI + + Y IGK+ Sbjct: 69 DELKKRNNQVELVNFSDSQQQMLELIESKQDILSYQLPIVSK------EGVLYQIGKESE 122 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ ++G + + E A +F L S++ + G+ +P++ L+SF+ G Sbjct: 123 NKLHQVDGLIILIGDLSTRLFEAFAYWRRF--HLPSIVSVIDSAGLKALPIIGLLSFLIG 180 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q QL +GA IF L + RE G L+TA+++AGR+ S+ A+IGSMKINE Sbjct: 181 VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE 240 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DAI TMGL +L+ P++ L+I PLL A+ +I GA I+ +I F F + Sbjct: 241 EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLT 300 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + L + GL KAP + I +V +GF V ++S+G + T VVQ++ ++II Sbjct: 301 RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII 360 Query: 360 IDSLFAIFYFAIGI 373 D+ F+I Y +G+ Sbjct: 361 ADAAFSIAYSWMGL 374 >gi|33591357|ref|NP_879001.1| putative integral membrane protein [Bordetella pertussis Tohama I] gi|33570999|emb|CAE40477.1| putative integral membrane protein [Bordetella pertussis Tohama I] Length = 376 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 10/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W ++ + + DL + +DTIGA L+ + Sbjct: 21 VCHVSGDWSMQALAAPGEVERRRAALARVDPDQRWDLRGVERLDTIGAHLLWGAWGQQLP 80 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + S ++F + + + P + IG + + + Sbjct: 81 --ERVRWSDGQREVFQTLQRNRGEALPAPAPADRW------GWLRAIGDAVFDAGRNGRA 132 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G ++ + G F +G + Q+Y G + + L+ F+ G V++ A Sbjct: 133 LVIMFGQLVLDLGAFLRRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSA 190 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ M Sbjct: 191 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVM 250 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + LI PR+ AL I++PLL + + A++G + + F + +L Sbjct: 251 GISHGQRLILPRVIALAITMPLLVVWTDAMALLGGMLAAQMQLGVSAQWFLTSLPDAISL 310 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N + G+ K I +VA G + ++ SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 311 TNYWIGMFKGVSFGILIALVACHFGLCIQPNTESLGRGTTTSVVTSITGVILVDALYAVI 370 Query: 368 YFAIGI 373 + +IGI Sbjct: 371 FSSIGI 376 >gi|319761111|ref|YP_004125048.1| hypothetical protein Alide_0383 [Alicycliphilus denitrificans BC] gi|317115672|gb|ADU98160.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] Length = 388 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%) Query: 3 ENGITVFRF--AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++G R G+W + ++ +A L + +D +GA+++ Sbjct: 27 QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 86 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +S ++ ++ + +G +++ Sbjct: 87 HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 137 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + ++G ++ + + + + +Y +G + + L+ F+ G Sbjct: 138 ALGHLADMVELVGQLLLDLLRLVRNPARAP--WRDISGHVYQMGAKALHITALVGFLIGV 195 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 196 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 255 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ L+ PR AL +++PL+ + +A+ G + I A F Sbjct: 256 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 315 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++N++ + K+ I ++ G V ++ SLG+ T VV +I++VI++ Sbjct: 316 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 375 Query: 361 DSLFAIFYFAIG 372 D+LFA+ + +G Sbjct: 376 DALFAVAFKNLG 387 >gi|157165030|ref|YP_001466748.1| MTA/SAH nucleosidase [Campylobacter concisus 13826] gi|112799982|gb|EAT97326.1| ABC transport system permease [Campylobacter concisus 13826] Length = 368 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 103/370 (27%), Positives = 174/370 (47%), Gaps = 14/370 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NG +FAG + + + + D S + ID +++ Sbjct: 13 NGTATIKFAGEFSYKDAKNLQSIFKKIQKLK---GNVKFDFSELKSIDYA---VLILLKN 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 +GK + + S + + K P S N +G+KI + Sbjct: 67 TLNGKKFEIITNDEKIKAMSDLLNDEKIDFKYMPPHNS------LNFFSRLGEKICEGFV 120 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + LG + + + + + GV+ V +V L +F+ G V+A Sbjct: 121 NLLEFGSFLGEFLIKSVRILFNPANLR--FREFSNYIKDGGVNAVFIVSLTAFLIGVVLA 178 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G+ L+ FGA IF +++M +L LRE+ L+ A+++AGRS S+ A+IG+MK+ EEIDA Sbjct: 179 YLGSAMLASFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTEEIDA 238 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TMG + L+ PRI A+++ +P++ +A+ +I+G I+ DI F+ + +RF Sbjct: 239 MKTMGFEPFNFLVLPRIIAMVLCVPVIIFIADSISILGQMIICQTILDISFSDYLNRFRE 298 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L + G+IKAPF I I+ GF V ++ SLG T VV +I VI +D+ Sbjct: 299 MVELRHFAVGMIKAPFFGAVIAIIGCMRGFGVSQNAQSLGAMTTVSVVNAIFWVIALDAF 358 Query: 364 FAIFYFAIGI 373 FAI + + I Sbjct: 359 FAIIFMWLKI 368 >gi|294054794|ref|YP_003548452.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] gi|293614127|gb|ADE54282.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] Length = 366 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 93/369 (25%), Positives = 173/369 (46%), Gaps = 9/369 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQS-DSAIVDLSAITEIDTIGAELIMYFMEK 64 R G+W + ++ A++ S + D + E DT I + Sbjct: 6 GLCVRIYGDWLLGNTRPGSQELESALSVVTTSEQAIRFDAGDLGEWDTGLLIFIRRCYDL 65 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + S E ++++ + P+ + + +G++ + Sbjct: 66 AQERGLEVDFSGLPEGAQNMMALSLAV------PEPAKADGRKVSWLSRVGERSLAVGGG 119 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S G + + F + + GV +P+V+L++ +TG +IA Sbjct: 120 VRSYCDFFGQFLLDLLAFVTGRGQVRR--RDFFLLCQETGVQALPIVMLLNCLTGLIIAF 177 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 G QL +F A+IF DL+ + RE+G ++T V++AGR+G+A A+IGSM++NEE+DA+ Sbjct: 178 IGVIQLQKFAADIFVADLVGLATARELGAVITGVIMAGRTGAAFAAQIGSMQVNEEVDAL 237 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T G+ ++ L+ PR+ AL++ +PLL ++A+ I+G I+ D+ +F++ H Sbjct: 238 TTFGISPMQFLVVPRVVALVLMMPLLGVVADIVGILGGLIIAVSISDVSVIQYFNQVHQA 297 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + F G+ K IGI G G ++S+G T+ VV SI+ +++ D++F Sbjct: 298 VGLNDFFIGIFKCAVFGLIIGIAGCYRGLNCGRDASSVGLATTSAVVTSITWLVVADAIF 357 Query: 365 AIFYFAIGI 373 A+ +GI Sbjct: 358 AVLCHLLGI 366 >gi|254417869|ref|ZP_05031593.1| conserved hypothetical protein [Brevundimonas sp. BAL3] gi|196184046|gb|EDX79022.1| conserved hypothetical protein [Brevundimonas sp. BAL3] Length = 372 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 100/373 (26%), Positives = 186/373 (49%), Gaps = 12/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G R G+W + + + + ++ VD + DT GA ++ Sbjct: 11 AGDGTAKLRLVGDWTTTALGRLPQRLGKDLDGR---KIESVDTRDLGRFDTAGALALVQA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 +++++I RK K +F + IG+ + F Sbjct: 68 SH-CGVPKSAWTERPEAGRIYTMIEALERKSSPPPKQ-----PGAFTSAFAKIGRGVYDF 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ LG ++ E + + + + Q G+ +P+V++ +F GAV Sbjct: 122 GAEAMLSLAFLGRLMEAVVEAAKNPGGIR--WPAWVSQAERAGLDAIPIVMVTNFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G L+ FGA++F++ L+ + RE V++ +V++AGRS SA AEIGSM++N+E+ Sbjct: 180 VAFIGVDLLTDFGAQVFAVQLIGVAMFREFAVVIASVLLAGRSASAFAAEIGSMRMNQEV 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG++ + L+ PR+ AL++ LPLLT + ++G IV W ++ A FF R Sbjct: 240 DAMQVMGVNPFQALVVPRLAALVLMLPLLTFMGMIGGLLGGLIVCWSSLNLGPAFFFQRL 299 Query: 302 HSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ ++ GL+KAP A I + ++G +V SLG++VT VVQ+I +I++ Sbjct: 300 VEDGSMAQHMMVGLVKAPVFALVIAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359 Query: 361 DSLFAIFYFAIGI 373 D++FA+ + + I Sbjct: 360 DAVFALMFLELDI 372 >gi|317153918|ref|YP_004121966.1| hypothetical protein Daes_2214 [Desulfovibrio aespoeensis Aspo-2] gi|316944169|gb|ADU63220.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis Aspo-2] Length = 431 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 14/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ G F G +P + + D+ + + + D S I +D G L++ Sbjct: 67 VTGAGQLRFEIRGRLDAPGTAHVWDEASR-VASAGSGGAVEADCSGIEYMDGSGMALLLK 125 Query: 61 FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 E + G + L ++ QL L P + + + L +G+ Sbjct: 126 LREVVAEAGGTLSLVNLAPRHRQLIDLTG-------DRPLPGWNPADSERRGLAERVGRA 178 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + +G + + ++ +VGV + ++ L+ F+ Sbjct: 179 TRDALTGIREMVEFVGEASVIITRSLLHPSRVR--WKDVLLSCVHVGVDSLFIISLLGFL 236 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G +++ Q A L +FG EIF +++ ++ RE+G L+TA+++A RSGSA AEIG+MKI Sbjct: 237 MGLIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTAILLAARSGSAFAAEIGTMKI 296 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEE+DA+ TMGL +R L+ P++ + + +PL+T+ N ++++G ++V+ P F Sbjct: 297 NEELDALTTMGLSPMRFLVVPKLLSALAMVPLMTLFFNLASLVGGALVM-LSLGFPLVTF 355 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 SR S ++ F G+ KA + + V G ++++G T+ VV I + Sbjct: 356 TSRVFSYVHYSDFFGGMAKALVFSILVAGVGCLRGMQTRSGASAVGLSTTSAVVTGIIFI 415 Query: 358 IIIDSLFAIFYFAIGI 373 D LFA+ ++ + I Sbjct: 416 AFADGLFAVAFYYLKI 431 >gi|121592684|ref|YP_984580.1| hypothetical protein Ajs_0250 [Acidovorax sp. JS42] gi|120604764|gb|ABM40504.1| protein of unknown function DUF140 [Acidovorax sp. JS42] Length = 372 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 168/361 (46%), Gaps = 11/361 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 G+W + ++ +A L + +D +GA+++ + Sbjct: 22 QGDWVAAAFADRRAWRRVAAQLKECGPGVAWSLQGVQRLDHVGAQILWNHWGRAW----- 76 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131 +L + + P + +G ++ ++ + Sbjct: 77 ----PEQLELTENQREMLERVAQYTTPCEPPAPWRLGDQVDRLGVMVLHALDHVRHLVIL 132 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G ++ + + +G + +Y +G + +P+ L+ F+ G V+A + QL Sbjct: 133 VGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVVLAYLMSLQLR 190 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 191 QFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPH 250 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 L+ PR AL +++PL+ + +A+ G + I A F + ++N++ Sbjct: 251 GFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQALPAAVNVSNLW 310 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + K+ I ++ G V ++ SLG+ T VV +I++VII+D+LFA+ + + Sbjct: 311 LAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVDALFAVAFKNV 370 Query: 372 G 372 G Sbjct: 371 G 371 >gi|254450464|ref|ZP_05063901.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus 238] gi|198264870|gb|EDY89140.1| ABC transporter, inner membrane subunit [Octadecabacter antarcticus 238] Length = 376 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 8/371 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + G P +++I + LS +T DT A I Sbjct: 13 STDAAVTMTLRGAMTLPYVTQIVAKFDTL----PMDRTVRAYLSGVTRFDTSAAWAIASL 68 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + + SL+ IG +V Sbjct: 69 RTRLETAGQHLEIRGAGIGHESLLKSVTDAMPVITPA--PVVAGGLIEWVAAIGSSMVDA 126 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + GL +S +F+ L +L+ VG VP+V L++F+ G V Sbjct: 127 VTFVLELIGYFGLFLSRLLRAIRHPKEFR--LTALVHHCQEVGFKAVPIVALMAFLIGVV 184 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A QG+ QL QFGAE+F +DL+++ LRE+G+LLT++++AGR+ SA A IGSMK+ EEI Sbjct: 185 LAFQGSTQLKQFGAEVFIVDLIAVSILRELGILLTSIIVAGRTASAFTAAIGSMKMREEI 244 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R++GLD L PRI AL++ LP+L ++AN + G +I+ W I +F +R Sbjct: 245 DAMRSLGLDPAATLFVPRILALVLMLPILGLIANVMGLFGGAIMAWIDLGISPEMFMTRL 304 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++++ G+IKAP A IG+V G V ++ SLG+ ++ VV +I VI+ D Sbjct: 305 VNGTDVSHLAAGMIKAPVFALIIGVVGCHAGMQVQSNAESLGRMTSSSVVAAIFAVIMAD 364 Query: 362 SLFAIFYFAIG 372 ++F+IF+ IG Sbjct: 365 AVFSIFFAQIG 375 >gi|315639122|ref|ZP_07894289.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter upsaliensis JV21] gi|315480826|gb|EFU71463.1| ABC superfamily ATP binding cassette transporter, ABC protein [Campylobacter upsaliensis JV21] Length = 368 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 101/338 (29%), Positives = 166/338 (49%), Gaps = 10/338 (2%) Query: 39 SAIVDLSAITEIDTIGAELIMYF---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 I+D + ID G + ++K + +S + LF L +++ +K Sbjct: 38 QCILDFHHLEFIDMAGVRFFLALEYELQKRGIVSQRVHLSEKFDALFELCEKNYQRILKE 97 Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 K L ++G + + +G + ++ F+ ++ Sbjct: 98 PKKHFDT-----AELFVNLGVLSLNLLGILKQFICFVGEFFTAFFQYFKKPKAFR--FIA 150 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + + + +P+VIL + + G V+A Q AFQL+QFGA IF +DL+ I RE+ L+ Sbjct: 151 FLYHIENSALKALPIVILTALLVGVVLAYQAAFQLAQFGANIFIVDLVGISATRELAPLI 210 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 A++IAGRS S+ A+IG MKI +EI A+ TMG +I PR+ AL++++PL+ +++ Sbjct: 211 AAIVIAGRSASSYTAQIGVMKITDEIAAMNTMGFSTFHFIIIPRVIALVVAMPLIVAVSD 270 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 F +I G +V DI F F RF L ++ GLIKAP IG++A G V Sbjct: 271 FVSIFGGMMVAHLNLDINFIEFLRRFKEAVDLKHVIIGLIKAPIFGFLIGLIACFRGLEV 330 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+G T VV +I VI D+LF++ +GI Sbjct: 331 KHTTQSIGIYTTKSVVNAIFWVIAFDALFSVILTQMGI 368 >gi|221199880|ref|ZP_03572923.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221207452|ref|ZP_03580461.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221172655|gb|EEE05093.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221180119|gb|EEE12523.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 446 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ VV + DLS I +D +G + + + Sbjct: 91 TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALWRVWGRKLP 150 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R L G + F Sbjct: 151 PGIALTATQ-----RTIFERIERLDSQREAPERVVRVGPITRL----GLMLFAFAEHLHG 201 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439 Query: 368 YFAIGI 373 + +G+ Sbjct: 440 FQNVGL 445 >gi|30248137|ref|NP_840207.1| ABC transporter permease [Nitrosomonas europaea ATCC 19718] gi|30180022|emb|CAD84017.1| possible ABC transport permease [Nitrosomonas europaea ATCC 19718] Length = 386 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 85/375 (22%), Positives = 178/375 (47%), Gaps = 15/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDV---VMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 + G T+ + G++ + V + + + S DL+ ++++D GA ++ Sbjct: 20 TAAGDTLLQLTGSFTLTSLDRSFPTVTKELAKLASQSDASSLHWDLTDVSQLDYAGAVML 79 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + L + E++F + + + + +GK++ Sbjct: 80 WRIWGEQRPAHLL--LRPEQERMFLRLEKSVSLPEQPR--------RILFLPISMLGKQL 129 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 ++F++ + G ++ + + + +Y G + + ++ F+ Sbjct: 130 LRFLDHLTGMITLSGQIVLDLFFLMTHPGRIPA--REISANLYRTGAQALGITAVVGFLI 187 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ + QL FGA+I+ ++++ + +RE+G +L A+++AGRSGSA+ A++G M++ Sbjct: 188 GIVLSYLTSEQLHMFGADIYIVNILGMSIIRELGPMLAAILVAGRSGSAMTAQLGVMRVT 247 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ MG+ L+ P+I L I+LPL+ + + A++G + + Sbjct: 248 EELDALTVMGIPHSMRLVLPKIIGLGIALPLIVLWTSAIALLGGLVAAELQIGLSIHYAL 307 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + T +AN++ GL K I ++A G + ++ SLG+ T VV SI+ VI Sbjct: 308 TALPDTVPIANLWLGLGKGMVCGMTIALIACHFGLRIKPNTESLGEGTTNSVVTSITAVI 367 Query: 359 IIDSLFAIFYFAIGI 373 +ID++FA+ + IGI Sbjct: 368 LIDAIFAVAFSNIGI 382 >gi|124386096|ref|YP_001027344.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|124294116|gb|ABN03385.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] Length = 428 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 71 GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 130 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 L ++ + + S + G+ + F Sbjct: 131 ---------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 181 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG +I + + +Y G +P+ L++F+ G V++ Sbjct: 182 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 239 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 240 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 299 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + PR+ AL +++PLL + N A+ G ++ I F S Sbjct: 300 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 359 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 360 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 419 Query: 366 IFYFAIGI 373 I + +G+ Sbjct: 420 ILFQNVGL 427 >gi|307635079|gb|ADI85448.2| ABC transporter, membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 380 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 86/375 (22%), Positives = 164/375 (43%), Gaps = 14/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60 S +G R G+W + + V + + S + + + D+ ++ Sbjct: 17 SADGTLSLRLEGDWLAGSLPLPPGAVEDELAVAPASR-LLFETGDLGRWDSGLITFLIRV 75 Query: 61 --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + +L +L + + + + + L I ++ Sbjct: 76 QALCAGQGMAFDGGNLPEGARRLLALATAVPEQTLTHGGSRPP--------LLERIADRV 127 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + LG V G A +F+ L+ M G +P+V LISF+ Sbjct: 128 IGMWKSMVEMSAFLGEVTVACGRLLAGRARFRR--SELLAIMQECGAQALPIVSLISFLV 185 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A GA QLS FGA+I+ L+ I +R +G ++T +++AGR+G+A A +G+M++N Sbjct: 186 GLILAFVGAVQLSMFGAQIYVASLVGIGIVRIMGAIMTGIIMAGRTGAAFAARLGTMQVN 245 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ T+G+ V L+ PR+ AL++ +PLL + A+ I+G V D+ + Sbjct: 246 EEIDALATLGISPVEFLVIPRVAALVLMMPLLCLYADLMGILGGLAVGVLMLDLNVTEYI 305 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + L + + GL + + + G G ++S+G T+ VV I ++ Sbjct: 306 TMTKKAVRLKDFWVGLFHSGVFGVLVALAGCLRGIQCGRSASSVGDAATSAVVTGIVSIV 365 Query: 359 IIDSLFAIFYFAIGI 373 + ++ + +GI Sbjct: 366 VATAVITVICNILGI 380 >gi|224371971|ref|YP_002606137.1| ABC-type transporter, permease protein [Desulfobacterium autotrophicum HRM2] gi|223694690|gb|ACN17973.1| ABC-type transporter, permease protein [Desulfobacterium autotrophicum HRM2] Length = 373 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 178/372 (47%), Gaps = 15/372 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY----F 61 T +G+ +S++ + A+ + ++DL + +D+ GA L+ + + Sbjct: 13 GTTVTLSGSLDIAGVSKVWEKAEKAL---FGTGDLVIDLKRVDHMDSAGAALVWFIKTTW 69 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ GKI + G+ +Q+ L + + GK Sbjct: 70 KQRTGGKISVLGLKPAFKQVMDLTETIPDTRD-----GEKKPKKKPPSFVETRGKNFADQ 124 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + S ++G + + + GV+ +P+V LISF+ G V Sbjct: 125 MEKATSFIALVGQITRALIHAFFHPLSVR--WKDALLTAERSGVNALPIVALISFIVGLV 182 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q A + FGAEI+ +L+ I +RE+G L+TA+++AGRSGSA AEIG+MKINEEI Sbjct: 183 MAFQAAMPMKMFGAEIYVANLIGIAMVRELGPLMTAIILAGRSGSAFAAEIGTMKINEEI 242 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ TMGLD VR L+ PRI A + PLLTI +NF I+G SIV P ++S+ Sbjct: 243 DALSTMGLDPVRFLMVPRILAAVFITPLLTIFSNFVGIMGGSIV-LLSMGYPAITYYSQV 301 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S T + GL+K I G ++G T+ VV I+++ + D Sbjct: 302 ISFVTWIDFTGGLVKCFVFGILISAAGCIRGIETQSGPGAVGASTTSAVVTGITLIAVFD 361 Query: 362 SLFAIFYFAIGI 373 +F++ ++ +GI Sbjct: 362 GIFSVLFYCLGI 373 >gi|53802513|ref|YP_112711.1| ABC transporter permease [Methylococcus capsulatus str. Bath] gi|53756274|gb|AAU90565.1| putative ABC transporter, permease protein [Methylococcus capsulatus str. Bath] Length = 406 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 89/371 (23%), Positives = 172/371 (46%), Gaps = 13/371 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G V G+W + + D+ + ++ + DL + +D+ GA ++ Sbjct: 48 EDGTAVVH--GHWNLRGLIAASPDLRERLCRAARRPDLEWDLRGVNVLDSAGAFVLWQAW 105 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + L R+ P + I I Sbjct: 106 GER---------LPERIALRHEQQSAFRRWQTGGIPAVRDGRRPPVPIRRRIIAAIAGLG 156 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + +LG +I + + ++ G + + L+ F+ G V+ Sbjct: 157 SHLLAVLALLGQLILDLAHLARHPADIP--WREISATIHETGGRALGITALVGFLIGVVV 214 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + + QL FGA+++ ++++ + +RE+G LL A+++AGRSGS++ A IG M++ +E+D Sbjct: 215 SYLSSLQLKTFGAQVYIVNILGMSIIRELGPLLAAILVAGRSGSSMTARIGVMRVTQELD 274 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ MG+ LI P++ AL+++LPLL + + A+ G ++ +I + FF + Sbjct: 275 ALAAMGISQSLRLILPKVVALVVALPLLVVWTDVVALAGGAVSAHLELEIGYHQFFQKLP 334 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S +AN GL KA + ++A G + ++ SLG + T VV SI++VI++D+ Sbjct: 335 SAVPVANFAIGLGKAAVFGLFVALIACHYGLRIAPNTESLGNETTNSVVVSITLVILVDA 394 Query: 363 LFAIFYFAIGI 373 +FAI + ++GI Sbjct: 395 VFAILFRSVGI 405 >gi|301060039|ref|ZP_07200913.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300445918|gb|EFK09809.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 376 Score = 239 bits (610), Expect = 6e-61, Method: Composition-based stats. Identities = 94/376 (25%), Positives = 175/376 (46%), Gaps = 12/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL--- 57 ++E+ GNW+ + ++ +++ D + + D+ Sbjct: 10 LTESETLTVHLQGNWQMESGVPSSGALLDQLDQHSSIKRIEFDATELGSWDSSLPIFFFE 69 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 I + K++ G+ + QL L + K + + S H+G + Sbjct: 70 ISKLAVEKKTKVQKDGLPAGVRQLIDLATAV-------PKKEDARQTVSRAGFFGHVGSE 122 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ F + +G +F+ L + Q G VP+V LISF+ Sbjct: 123 VIDFTKSAGELITFIGAAFEAFVRMITGRARFRATDLGIFLQ--EAGAQAVPIVSLISFL 180 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A G QLS FGA+++ DL+ I +RE+G ++T +++AGR+G+A A++G+M++ Sbjct: 181 VGLILAFVGILQLSMFGAQVYVADLVGIAMVREMGAIMTGIIMAGRTGAAYAAQLGTMQV 240 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+ T+ + + L+ PR+ AL + +PLL + A+ I+G ++V Y I V+ Sbjct: 241 NEEIDALETLAIPPMEFLVLPRMVALAVMMPLLVLYADLMGILGGALVAVGMYKIDIIVY 300 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 SR S TL+++F GL + + G G ++++G T+ VV I + Sbjct: 301 LSRTKSAVTLSDLFIGLFMGAVFGVLVALSGCLRGIQCGRSASAVGDATTSAVVTGIVAI 360 Query: 358 IIIDSLFAIFYFAIGI 373 II ++ + +GI Sbjct: 361 IIATAVITVLCSILGI 376 >gi|315498539|ref|YP_004087343.1| hypothetical protein Astex_1526 [Asticcacaulis excentricus CB 48] gi|315416551|gb|ADU13192.1| protein of unknown function DUF140 [Asticcacaulis excentricus CB 48] Length = 377 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 6/367 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V G+W + + + + + A+ + DL DT GA + + Sbjct: 14 GEARVVSLTGDWTAIGLRDAGERLKSALKSASAVRVETDDLKG---FDTAGAYALRTALG 70 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + ++ LI + ++ QK + +G+ N Sbjct: 71 ALGDDALFSH-DPRLSAVYELIRDIQPQVVEAQKKTAQQKAHPIIAELAQLGRNTEDVFN 129 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D +G +I + + + L+ QM G + VV + +F GAVIA Sbjct: 130 DLRDLNVFIGQLIVTAFMSLVTPGRIR--WTPLVAQMQQAGFGALMVVCVTNFFVGAVIA 187 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G QL QFGA +F+++L+ I LRE G ++ AV+IAGRS S+ AEIG+MK+N+EI A Sbjct: 188 FLGILQLQQFGAAVFAVELIGISVLREFGPVIAAVLIAGRSASSFTAEIGAMKMNQEISA 247 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG++ LI PR+ AL++++PL+T + + ++G +V+W F R Sbjct: 248 MRVMGINPFDALIFPRLAALVLTMPLITFAGSMAGLLGGFVVVWAQLGYGPHFFSIRMTE 307 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 N F G+IK P A AI I+ + G V SLG++VT VVQ+I +I+ID++ Sbjct: 308 YVPFVNFFVGMIKVPLFAIAITIIGCRLGMNVTEDVISLGRQVTRAVVQAIFTIILIDAI 367 Query: 364 FAIFYFA 370 A+ + Sbjct: 368 VAMMFNG 374 >gi|302342029|ref|YP_003806558.1| hypothetical protein Deba_0592 [Desulfarculus baarsii DSM 2075] gi|301638642|gb|ADK83964.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075] Length = 380 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 90/364 (24%), Positives = 171/364 (46%), Gaps = 7/364 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G G ++ E + + K + S ++DLS + +DT GA + Sbjct: 19 GGDLHVSLRGRLGVNQLPEFQTAIARVL-KELAPRSVLLDLSRLDYLDTSGAMAV-KIWA 76 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + + +++ +++ + +G+ + Sbjct: 77 AAPPQDLAVRLEAGQSRFRDMLALIDVDQVRKPAINPDKRD---AGMLEGMGQSARRMGE 133 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +G + A + ++ M VGV G+P+V LI + G ++A Sbjct: 134 QIGQLLAFVGQATKSVLMVVARPATLRM--GDVLAYMQQVGVDGLPIVSLIGLLLGMIMA 191 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + QL FGA+++ L+++ +RE+G ++TA+++AGRSGS+ AEIG+MK+NEE+DA Sbjct: 192 FMSSLQLKSFGADVYVATLVAVAMVRELGPIMTAILVAGRSGSSFAAEIGTMKVNEEVDA 251 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG D V L P++ A ++ +PLLT+ + +AI+G IV D+ + + S Sbjct: 252 LTVMGYDPVIFLALPKVIAAVLMVPLLTLFSIAAAIMGGLIVGVAGLDLTPYTYLNESIS 311 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ T + KA I ++ ++GF V + +GK T+ VV ++ ++I+ DS+ Sbjct: 312 SFDAGDLMTSMFKAAVFGLLIAVIGCQKGFTVEGGAAGVGKATTSAVVAALFLIIVTDSV 371 Query: 364 FAIF 367 FAI Sbjct: 372 FAII 375 >gi|257459529|ref|ZP_05624638.1| ABC transport system permease [Campylobacter gracilis RM3268] gi|257442954|gb|EEV18088.1| ABC transport system permease [Campylobacter gracilis RM3268] Length = 367 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 114/372 (30%), Positives = 174/372 (46%), Gaps = 14/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G G W ++ + + LS I+ +D A +I Sbjct: 10 SSGGKNTLSLRGQW---NYKSSRSQLLALKKAVKNLNELELSLSEISNLDYFMALMIKNA 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + ++ L S ++ S + + +R N IG Sbjct: 67 L--AGKRVSLVEDSCKAAKILSFMDDKTIDFSYVPESRR-------LNFLAQIGLYCHLG 117 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I S A LG S F KF+ + + G+ + +V L +F+ G V Sbjct: 118 ILGLLSLASFLGEFFSKLAAFIIHPMKFR--FKETVNFIKDSGIDALFIVSLTAFLIGIV 175 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G+ LS+FGA I+ ID+M L LRE+ L+ A++IAGRS S+ A+IG MKI EEI Sbjct: 176 LAYIGSDMLSKFGASIYIIDIMGALTLREVAPLIAAIVIAGRSASSFTAQIGVMKITEEI 235 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+RTMG D L PRI A+++ +PL+ +A+ +I IV Y DI F+ + RF Sbjct: 236 DAMRTMGFDPFYFLAMPRIIAMVLIMPLVIFIADSVSIFAQMIVCDAYLDIAFSDYLDRF 295 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ L + G+IKAPF I I+ GF V ++ S+G+ T VV +I VI ID Sbjct: 296 KASVELRHFLVGMIKAPFFGAFIAIIGCMRGFEVKGNTQSIGEYTTISVVNAIFWVIAID 355 Query: 362 SLFAIFYFAIGI 373 ++FA+ + IG+ Sbjct: 356 AVFAVLFSEIGL 367 >gi|330822969|ref|YP_004386272.1| hypothetical protein Alide2_0328 [Alicycliphilus denitrificans K601] gi|329308341|gb|AEB82756.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 372 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 170/372 (45%), Gaps = 13/372 (3%) Query: 3 ENGITVFRF--AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++G R G+W + ++ +A L + +D +GA+++ Sbjct: 11 QDGTATPRALPQGDWVAAAFADRRAWRRLAAQLKACGPGHAWSLQGLARLDHVGAQVLWN 70 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +S ++ ++ + +G +++ Sbjct: 71 HWGRAWPA--QVDLSAAQREMLERVARFSTPCAPAPP-------WRLADQIDRLGVLVLR 121 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + ++G ++ + + + + +Y +G + + L+ F+ G Sbjct: 122 ALGHLADMVELVGQLLLDLLRLVRNPARAP--WRDISGHVYQMGAKALHITALVGFLIGV 179 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A + QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE Sbjct: 180 VLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEE 239 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+R MG+ L+ PR AL +++PL+ + +A+ G + I A F Sbjct: 240 LDAMRVMGIAHGFRLVMPRALALGLAMPLIALWTTLAALAGGMLAADLTMGISSAYFLQA 299 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++N++ + K+ I ++ G V ++ SLG+ T VV +I++VI++ Sbjct: 300 LPAAVKVSNLWLAMAKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIVV 359 Query: 361 DSLFAIFYFAIG 372 D+LFA+ + +G Sbjct: 360 DALFAVAFKNLG 371 >gi|329890329|ref|ZP_08268672.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568] gi|328845630|gb|EGF95194.1| hypothetical protein BDIM_20300 [Brevundimonas diminuta ATCC 11568] Length = 372 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 186/373 (49%), Gaps = 12/373 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S++G T R AG+W + + + D + ++ +DL + DT GA + Sbjct: 11 SQDGQTRLRLAGDWSTVAVGRMGDRLKAELDGRS---VTALDLDDLGRFDTAGALAVAQA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 M + V +L+ +++ + +G+ + F Sbjct: 68 MSR-PIPESAWSVRPEAGRLYRMVAKLD-----CMTAEPPRRSAPMTRGFAKVGRGVYDF 121 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ LG +++ + + + Q G+ +P+V++ +F GAV Sbjct: 122 GAEAMLSLAFLGRLMAAVLTTLKHPGRIR--WAAWFSQAERTGLDAIPIVVVTNFFIGAV 179 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G L+QFGA +F++ L+ + RE V++TAV++AGRS S+ AEIGSM++ +E+ Sbjct: 180 VAFIGVDLLTQFGAGVFTVQLIGVAVFREFAVVITAVLLAGRSASSFAAEIGSMRMTQEV 239 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ MG+D + L+ PR+ AL++ LPLLT LA ++G +V W ++ A FF R Sbjct: 240 DAMKVMGVDPFQALVIPRLAALLVMLPLLTFLAMVGGLLGGVLVAWSQLNLGPAFFFQRL 299 Query: 302 HST-ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ GLIKAP A + + ++G +V SLG++VT VVQ+I +I++ Sbjct: 300 VEDGYMPTHMMVGLIKAPVFALVVAAIGCRQGMSVAGDVESLGRRVTAAVVQAIFAIILL 359 Query: 361 DSLFAIFYFAIGI 373 D++FA+ + + I Sbjct: 360 DAVFALIFIELKI 372 >gi|221211088|ref|ZP_03584067.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221168449|gb|EEE00917.1| putative ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 446 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ VV + DLS I +D +G + + + Sbjct: 91 TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALWRVWGRKLP 150 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R L G + F Sbjct: 151 PGIALTATQ-----RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 201 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 202 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 259 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 260 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 319 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 320 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 379 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 380 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 439 Query: 368 YFAIGI 373 + +G+ Sbjct: 440 FQNVGL 445 >gi|167647526|ref|YP_001685189.1| hypothetical protein Caul_3564 [Caulobacter sp. K31] gi|167349956|gb|ABZ72691.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 371 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 113/370 (30%), Positives = 196/370 (52%), Gaps = 11/370 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G +G+W + + + + ++ A++ SD+ +DL ++ DT GA I+ + Sbjct: 13 EGRKTVMLSGDWTARGMVDAGERLITALD---GSDAVDLDLRDLSRCDTAGAYAIIRAAD 69 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ S + +L L+ + + + PQ F+ L IG+ + + Sbjct: 70 GRVSAGHIKANSRTL-RLLQLVGDAIQVEPEAAPPQ-----KGFQALLERIGRGVYGLGD 123 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D LG ++ G A + + ++ G+ +P+V + +F GAV+A Sbjct: 124 DLYGTLGFLGHLLVAIGRCIAKPSRIR--WAPVVALAERSGLDAIPIVAVTTFFIGAVVA 181 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA L+QFGA++F+++L+ I LRE +L+TA+++AGRS S+ AEIGSMK+N+EIDA Sbjct: 182 LLGANLLTQFGAQVFAVELIGISVLREFNILITAILLAGRSASSFAAEIGSMKMNQEIDA 241 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++ MG+D L+ PR AL+I++PLLT +A + + G +V W D+ F R Sbjct: 242 MQVMGVDPYEALVLPRFAALLITIPLLTFIATLAGLAGGMLVTWAVLDLSPTFFLQRMQD 301 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + + + GL KAP MA I + ++G VG SLG++VT VV +I +I ID++ Sbjct: 302 SVGVQHYWIGLSKAPVMAMVIAAIGCRQGMEVGNDVESLGRRVTAAVVHAIFAIIAIDAV 361 Query: 364 FAIFYFAIGI 373 FA+ Y + + Sbjct: 362 FALIYMELDL 371 >gi|121607910|ref|YP_995717.1| hypothetical protein Veis_0920 [Verminephrobacter eiseniae EF01-2] gi|121552550|gb|ABM56699.1| protein of unknown function DUF140 [Verminephrobacter eiseniae EF01-2] Length = 374 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 13/366 (3%) Query: 10 RFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G W + E+ + + K + DL A+ +D +GA+L+ ++ Sbjct: 20 QLYGRWGAAELGNAAQWQALSGQLRKHPAVPTLGWDLRALQWLDHVGAQLLWNHWQRAWP 79 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + S S+++ + P H+G ++ + + Sbjct: 80 QQLACTDSQ-----RSMLARVAQFSTTAPPPAPW----RLAAQVDHLGLLVLHGVEHARH 130 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG ++ + + +G + +Y +G + +P+ L+ F+ G V+A + Sbjct: 131 ILEMLGQLVLDLARLARAPR--RGPWRDVSGHLYRMGATALPITALVGFLIGVVLAYLMS 188 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 189 LQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTEELDAMRVM 248 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ L+ PR AL +++PLL++ +A+ G + I A F + Sbjct: 249 GIAHGFRLVLPRTLALALAMPLLSLWTTLAALAGGMLAADLTMGISPAYFAQALPAAVRP 308 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N+ + K+ I ++ G V + SLG+ T VV +I++VI++D+LFA+ Sbjct: 309 GNLGLAMAKSVVFGAGIALIGCHWGLRVRPDTQSLGEGTTASVVSAITMVIVVDALFAVT 368 Query: 368 YFAIGI 373 + IGI Sbjct: 369 FKTIGI 374 >gi|222109464|ref|YP_002551728.1| hypothetical protein Dtpsy_0244 [Acidovorax ebreus TPSY] gi|221728908|gb|ACM31728.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 372 Score = 237 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 167/361 (46%), Gaps = 11/361 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 G W + ++ +A L + +D +GA+++ + Sbjct: 22 QGEWVAAAFADRRAWRRVAAQLKDCGPGVAWSLQGVQRLDHVGAQILWNHWGRAW----- 76 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHI 131 +L + + P + +G ++ ++ + Sbjct: 77 ----PEQLELTENQREMLERVAQYTTPCEPPAPWRLGDQVDRLGVLVLHALDHVRHLVIL 132 Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G ++ + + +G + +Y +G + +P+ L+ F+ G V+A + QL Sbjct: 133 VGQLVLDVLRLLRNPR--RGPWRDISGHLYRMGATALPITALVGFLIGVVLAYLMSLQLR 190 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 QFGAE F ++++ I +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 191 QFGAEAFIVNILGISLIRELGPMLGAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPH 250 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 L+ PR AL +++PL+ + +A+ G + I A F + ++N++ Sbjct: 251 GFRLVMPRALALALAMPLVALWTTLAALAGGMLAADLTMGISSAYFAQALPAAVNVSNLW 310 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + K+ I ++ G V ++ SLG+ T VV +I++VII+D+LFA+ + + Sbjct: 311 LAMSKSVVFGVFIALIGCHWGLRVKPNTQSLGEGTTASVVSAITMVIIVDALFAVAFKNV 370 Query: 372 G 372 G Sbjct: 371 G 371 >gi|261885878|ref|ZP_06009917.1| MTA/SAH nucleosidase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 354 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 178/337 (52%), Gaps = 13/337 (3%) Query: 28 VMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF 87 ++ + +DL + ID A K++ KL + +++F+L+S Sbjct: 25 KKSLKELRSLKVDTLDLKNLIRIDYSAATFFA----KHYNCPKLINSNDKFDKIFALVSD 80 Query: 88 THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147 + ++ K ++S NL IGK I+ N+ S LG + N + + + Sbjct: 81 KYILNLQIIKFKKS-------NLIEQIGKNIINLKNELVSFCIFLGEFLFNLTKSLLNPF 133 Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + L Y G+S V +V L SF+ G V+A QGA L FGA I+ +D+M I+ Sbjct: 134 TVR--FKELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIYVVDIMGIMT 191 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 LRE+G L+ A+++AGRS S+ A+IG MKI +E++A++TMG + R ++ PR+ ALI+++ Sbjct: 192 LREVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIVMPRVLALILAM 251 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 P + LAN +I G +V Y D+ F+ + RF S+ L + + GL KAPF I ++ Sbjct: 252 PFIVFLANAVSIFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGLFKAPFFGAVIALI 311 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 K GF V NS+G+ T VV I + +D++F Sbjct: 312 GCKRGFEVSGSINSVGELTTRSVVHEIFWISALDAIF 348 >gi|260425314|ref|ZP_05779294.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45] gi|260423254|gb|EEX16504.1| ABC transporter, inner membrane subunit [Citreicella sp. SE45] Length = 366 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 113/367 (30%), Positives = 196/367 (53%), Gaps = 9/367 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ + + DLS + +DT GA L+ Sbjct: 8 TIVLRGDVNLASLASTRAIL------GCEGTIKAFDLSGVGVLDTAGAWLLASCRNAAAL 61 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF-FYNSFKNLHYHIGKKIVKFINDSC 126 + + V L+ K ++ +++ + +G+ + K ++ Sbjct: 62 RGETIAVIGASPAQTLLLETVTDAMADAAKVRQPRGLHHAMGDGLVGLGEAVSKKVSSIA 121 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 LGLV++ G + + L +L+ M+ G++ VP+V+L+ F+ G V++ QG Sbjct: 122 ESLGFLGLVMAQFGWTVLHPSRLR--LTALVHHMHLAGLNAVPIVVLMGFLIGIVLSFQG 179 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL QFGAE++ +DL++I LRE+G+LLTAV++AGRS SA A IGSMK+ EEIDA+R Sbjct: 180 ASQLKQFGAEVYVVDLIAISILRELGILLTAVIVAGRSASAFTATIGSMKMREEIDAMRV 239 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GLD + +L+ PR+ AL+I LPLL +A+ + ++G +++ W I +F ++ + Sbjct: 240 LGLDPIELLVLPRVLALVILLPLLGFIADMAGLVGGALMAWIELGISPGMFRTQLLNNTD 299 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++++ GL KAP A IG+V +G V + SLG + + VV +I +VI++D++F+I Sbjct: 300 VSHLLIGLAKAPVFAVIIGVVGCHQGMQVKGDTESLGNRTSRSVVAAIFLVIVVDAMFSI 359 Query: 367 FYFAIGI 373 F+ GI Sbjct: 360 FFAVWGI 366 >gi|89902676|ref|YP_525147.1| hypothetical protein Rfer_3917 [Rhodoferax ferrireducens T118] gi|89347413|gb|ABD71616.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118] Length = 376 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 175/368 (47%), Gaps = 15/368 (4%) Query: 10 RFAGNWKSPEISEIADDVVMA----INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R +G+W + ++E A+ + + + + DL + +D GA+++ + Sbjct: 20 RLSGDWSAARLAEPANWASLQSGLALGAAGAALEVSWDLRDLQRLDHTGAQVLWNAWGRQ 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + L + + S + P S L +G + I+ Sbjct: 80 WPRQLL--IEPAQRAMLSRVEQ-------YALPPPVARRTSAWQLFLALGALVWLLIDHL 130 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + L KG + ++ +G + +P+ L+ F+ G V+A Sbjct: 131 RDATRL--LGQLLLDTLRLLRAPAKGPWRDVSGHLFSIGATALPITALLGFLIGVVLAYL 188 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + QL QFGA+ F ++++ + +RE+G +L A++IAGRSGS I A+IG M++ EE+DA+R Sbjct: 189 MSLQLRQFGADSFIVNILGLSVIRELGPVLAAILIAGRSGSTITAQIGVMRVTEELDAMR 248 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ L+ PR A+ +++PLLT+ + +A++G + + A FF+ Sbjct: 249 VMGIAKGYRLVLPRAIAMALAMPLLTVWTSLAALLGGMLAADLTMGVTPAYFFAALPRAV 308 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++N+ + K+ I ++ G V ++ SLG+ T VV SI++VI++D++FA Sbjct: 309 EVSNLTLAMGKSVVFGLLIALIGCHYGLRVKPNTESLGQGTTASVVTSIAMVILVDAVFA 368 Query: 366 IFYFAIGI 373 + + IGI Sbjct: 369 LVFKDIGI 376 >gi|322378616|ref|ZP_08053052.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1] gi|322380555|ref|ZP_08054721.1| hypothetical integral membrane protein [Helicobacter suis HS5] gi|321147017|gb|EFX41751.1| hypothetical integral membrane protein [Helicobacter suis HS5] gi|321148923|gb|EFX43387.1| hypothetical protein HSUHS1_0274 [Helicobacter suis HS1] Length = 368 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 8/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+W ++ + + + ++ +D + +D + L+ + + Sbjct: 11 TLVLQGSWDFKTSAKALTHLKTILKDAPPIEA--IDFKGVASLDFVFLMLLYDLLGR--R 66 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 K + S + ++ ++ R K + F N +G+ +V F N + Sbjct: 67 KPEFLNPSAYNAKVLEVVETWIRANPSILKQEHVSRV--FINPLEKLGRGVVSFYNTLLN 124 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G++I G LI ++ G +PV IL FV G IA +GA Sbjct: 125 TFNFCGMIIYYVGLAFIRPKS--VCWTPLIHHIHESGFKVLPVSILTVFVVGFAIALEGA 182 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL + G + SI++ + L LRE+G + A+++AGRS S+ A+IG+MKI EE+DA+ TM Sbjct: 183 VQLQELGFPMMSIEMTAKLALREMGPFILALVVAGRSASSFTAQIGAMKITEELDAMETM 242 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL+ L+ PR+ AL+I++PLL LA+ A++GA I I I FA + +R H L Sbjct: 243 GLNPFAFLVLPRVVALVIAMPLLVFLADAFALLGAMIAIKYQLGIGFAHYVARLHENVGL 302 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ F GLIKAPF AI +V GF V ++ S+G+ T VV S+ +I +D+LF++ Sbjct: 303 SHFFIGLIKAPFWGFAIALVGCMRGFEVKGNTESIGQLTTISVVNSLFWIIFLDALFSVI 362 Query: 368 YFAIGI 373 + + + Sbjct: 363 FSRLDV 368 >gi|187476645|ref|YP_784668.1| membrane protein [Bordetella avium 197N] gi|115421231|emb|CAJ47736.1| putative membrane protein [Bordetella avium 197N] Length = 377 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 10/366 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G+W ++ + DL I +DTIGA L+ + Sbjct: 22 VVYLGGDWSLQALAVRGQVQARRDALAQTHAHTRWDLRGIQRLDTIGANLLWRLWGE--R 79 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ ++F+ ++ + IG+ I ++ Sbjct: 80 LPERVRLTDGQREVFNALAVNPGAVAPAPPVTDR------LSWVRAIGQAIFDAAHNGIM 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG ++ + +G + Q+Y G + + L+ F+ G V++ A Sbjct: 134 LLRMLGQLVLDFIGLLLRPS--RGPWREISAQIYRTGAQALGITALVGFLIGVVLSYLSA 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ M Sbjct: 192 QQLQMFGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMSVM 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + LI PR+ AL I++PLL + + A++G + I F + T+ Sbjct: 252 GISQSQRLILPRVVALAITMPLLVLWTDAMALLGGMLAAQMQLGISAQWFLESLPNAVTI 311 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 N + G++K I +VA G + + SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 312 TNYWIGMVKGVSFGVLIALVACHFGLRIKPDTESLGRGTTTSVVTSITGVILVDALYAVI 371 Query: 368 YFAIGI 373 +GI Sbjct: 372 LSGMGI 377 >gi|190572714|ref|YP_001970559.1| putative ABC transporter permease [Stenotrophomonas maltophilia K279a] gi|190010636|emb|CAQ44245.1| putative permease component of ABC transporter protein [Stenotrophomonas maltophilia K279a] Length = 373 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 110/365 (30%), Positives = 187/365 (51%), Gaps = 13/365 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G W A+ + + + +D + I ++D+ G ++ + Sbjct: 21 LIRLSGTWTLKTALAAAEVL-----RGVPDTLTGIDATGIEKMDSAGVLQVLRVAHRADL 75 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + L I + + + +G + ++ + Sbjct: 76 GEDALQFRPDHQALVCTIEEVADDRPRPK------RDFGVLAALERLGVSVHATGHNIKA 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA G+ Sbjct: 130 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA+RT+ Sbjct: 188 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD + +L+ PR+ AL+++LPLLT +A + + G V DIP ++ +R H T + Sbjct: 248 GLDPIDLLVLPRLLALLVTLPLLTFIAMIAGLAGGITVGAFDLDIPPQMYIARMHETMEV 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ A++ Sbjct: 308 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 367 Query: 368 YFAIG 372 + + Sbjct: 368 FMHMD 372 >gi|254524872|ref|ZP_05136927.1| ABC transporter permease [Stenotrophomonas sp. SKA14] gi|219722463|gb|EED40988.1| ABC transporter permease [Stenotrophomonas sp. SKA14] Length = 370 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 112/365 (30%), Positives = 187/365 (51%), Gaps = 13/365 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G W A+ + + + +D + I ++D+ G ++ + Sbjct: 18 LIRLSGTWTLKTALAAAEVL-----RGVPEKLTGIDATGIEQMDSAGVLQVLRVAHRADL 72 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + L I + K + +G + ++ + Sbjct: 73 GEDALHFRQDHQALVCTIEEVADDRPKPK------RDFGVLAALERLGVSVHATGHNIKA 126 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +F+ L + + QM VG+ VP+V L+S++ GAVIA G+ Sbjct: 127 LCSFLGENLVKAARLVKEPRRFR--LTATVHQMEQVGLDAVPLVALLSYLVGAVIAFLGS 184 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAEI+ ++L++I LRE VLLTA+++AGR+ SA A+IG+MK EEIDA+RT+ Sbjct: 185 TILRDFGAEIYVVELVNIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKAREEIDAMRTL 244 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GLD V +L+ PR+ AL+++LPLLT +A + + G V DIP ++ +R H T + Sbjct: 245 GLDPVDLLVLPRLLALLVTLPLLTFIAMVAGLAGGITVGAFDLDIPPQMYIARMHETMEV 304 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A IG++ EG V + S+G++ T+ VVQ+IS+VIIID+ A++ Sbjct: 305 RHMLVGLSKAPVFALVIGLIGCLEGLKVEGTAQSVGERTTSSVVQTISLVIIIDAFAALW 364 Query: 368 YFAIG 372 + + Sbjct: 365 FMHMD 369 >gi|207727753|ref|YP_002256147.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|206590994|emb|CAQ56606.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] Length = 374 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 95/371 (25%), Positives = 175/371 (47%), Gaps = 12/371 (3%) Query: 4 NGITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G +V +G+W + ++E A ++ ++ L+ + ID GA+L+ Sbjct: 15 DGRSVAYLSGDWTTLALAERAGVRSARRQIRAGLDNANAWCLTEVGRIDHFGAQLLWRAW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ ++ N +G ++ F Sbjct: 75 GNRWP--EHLDARADQRRMIDRVARLD-------PGGWKKRIAPRINPVTVLGGAMLDFA 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + + +G + +Y G + + L+ F+ G V+ Sbjct: 126 GHLRIGVAMVGQLMFDLLRFARAPH--RGPWREISANIYSTGYKALGITALVGFLIGIVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FGA IF ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+D Sbjct: 184 SYLSANQLRVFGASIFIVNILGMAIIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELD 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG+ LI P++ AL I++PLL + A+ G + DI F + Sbjct: 244 AMRVMGISHGFRLILPKVIALAIAMPLLVAWTDLLALAGGILAAKFQLDISPTYFITSLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN++ G+ K I +VA G + ++ SLG+ TT VV SI++VI+ D+ Sbjct: 304 DAVPVANLWLGIGKGVVFGMLIALVACHFGLRIQPNTQSLGEGTTTSVVVSITVVILADA 363 Query: 363 LFAIFYFAIGI 373 +FAI + +GI Sbjct: 364 VFAILFKDVGI 374 >gi|121998618|ref|YP_001003405.1| hypothetical protein Hhal_1839 [Halorhodospira halophila SL1] gi|121590023|gb|ABM62603.1| protein of unknown function DUF140 [Halorhodospira halophila SL1] Length = 376 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 108/365 (29%), Positives = 182/365 (49%), Gaps = 8/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+W ++ + ++ VDLSA+ +DT GA L+ + + Sbjct: 18 VRIRGDWTLAHY----RTLLRQVEQTRLGGEPRVDLSALGRLDTAGATLLARLLGAARVE 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQ-KPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + L+ + + P+ L +G ++ + Sbjct: 74 ALARSTPELSAERRKLLQAVAAASERARTAPEPRGDPYFLGQLTIGLGAQMTHAGHQLAR 133 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 GLVI+ ++++ L ++ RQ+ + + +P+V L++F GAVIA G Sbjct: 134 AIGFTGLVIAAFAAGLLRPWRWR--LAAVSRQLQHTALEALPIVALLTFAVGAVIAVLGV 191 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L +FGA IF++DL++ LRE GV+LTA+++AGRS SA A+IGSMK NEE+DA+R Sbjct: 192 TVLGRFGAGIFTVDLVAYAFLREFGVVLTAILLAGRSASAFTAQIGSMKANEELDAMRAQ 251 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G + +L+ PR+ AL+I++PLL+ +A + G +V D+P +S ++ Sbjct: 252 GFSPIEMLVIPRVVALLIAVPLLSFVAVVCGLAGGGLVTLLNVDVPAGR-IIALYSDISV 310 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL KAP A I I+ EG + S+G T+ VVQSI VII++++ A+ Sbjct: 311 SHYLAGLAKAPIFAFVIAIIGCLEGIKCSASAQSVGTHTTSAVVQSIFWVIILNAVAALI 370 Query: 368 YFAIG 372 Y +G Sbjct: 371 YVELG 375 >gi|217970678|ref|YP_002355912.1| hypothetical protein Tmz1t_2277 [Thauera sp. MZ1T] gi|217508005|gb|ACK55016.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 371 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 97/369 (26%), Positives = 168/369 (45%), Gaps = 12/369 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R AG+W + E + A+ A L A+ +D+ GA L+ Sbjct: 13 GAEGIRLAGDWTLRGLDECLPTLRRALATVP--PDARWSLRAVRRMDSFGALLLWQAWGG 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + I + + + + +GK + F Sbjct: 71 RWPAALE--ADDAQRAIIGRIENASARALPEPPRASA------LDAVALLGKGLFAFAGH 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG ++ + G + LL + ++ VGV +PV L+ F+ G V++ Sbjct: 123 LSGFVALLGRLVLDLGHLLHHPRDWP--LLEISANLHKVGVKAMPVSALVGFLIGVVLSY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FGA+ F ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+ Sbjct: 181 LSALQLRTFGADAFIVNILGMGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDAL 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ L+ P++ AL +++PLL + + A+ G + W I F Sbjct: 241 AAMGVSRSLRLVLPKVVALSLAMPLLVLWTSAIALFGGWVSAWVELGIGLQFFLRALPDA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +AN++ GL K I +VA G V + SL T VV +I++VI++D++F Sbjct: 301 VPVANLYIGLAKGAVFGFLIALVACHFGLRVKPDTESLSANTTASVVAAITVVILVDAVF 360 Query: 365 AIFYFAIGI 373 AI +IG+ Sbjct: 361 AIATRSIGL 369 >gi|167561346|ref|ZP_02354262.1| ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167568578|ref|ZP_02361452.1| ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 374 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 92/366 (25%), Positives = 169/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 19 TVRLYGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVVRLDHVGGQALWRVWGRRLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + L + + + + + + G+ + F Sbjct: 79 EGL---------ALTDNQRTVFERIERLDEGREAPEPVVRIDPITRFGQGLFTFGEHLYG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG ++ + + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIGLLGRLVIDLLSVLRRPRTMP--WTEISANVYAAGAKALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLAIDLNFFVRSLPSVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLWIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|242278699|ref|YP_002990828.1| hypothetical protein Desal_1226 [Desulfovibrio salexigens DSM 2638] gi|242121593|gb|ACS79289.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 371 Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats. Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 8/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + +G + E+ D A+ + +V+ S I +D GA L M Sbjct: 12 GSTMNISGRLDAEGAGEVWDKARAAVA----AGCLVVECSGIEYLDGGGASLFMMMKAGC 67 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + ++ + S + + + +G+ D Sbjct: 68 RDRGSSLVINGLRPEFASFLELFD-LDKAAPPSGQVKRKGGIRGWITSVGQSGQAVAADM 126 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 Q G + + K + VG G+P+++LI F+ G +++ Q Sbjct: 127 REQIEFTGNCVLASLSTATLKNKLR--WPDFWLTCEKVGADGLPIILLIGFLMGLIMSFQ 184 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A L +FGAEIF +++ ++ RE+G ++TA+++AGR+GSA AEIG+MK+NEE+DA+ Sbjct: 185 SAVSLMRFGAEIFVPNMLGLVMFRELGPMVTAILLAGRTGSAFAAEIGTMKVNEELDALN 244 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TMGL+ V L+ PR+ A + PLLT+ NF +++G ++V+ P A + R Sbjct: 245 TMGLNPVSFLVLPRVLATVCMTPLLTLFFNFMSLVGGALVM-LSMGYPLATYCGRVFENV 303 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + G+IKA + + + + G ++++G T+ VV I ++ + D +FA Sbjct: 304 QWMDFSGGMIKAVVFSFLVAGIGCQRGLVTKSGASAVGDSTTSAVVSGIILIAVFDGIFA 363 Query: 366 IFYFAIGI 373 + +F GI Sbjct: 364 VIFFLTGI 371 >gi|303327433|ref|ZP_07357874.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] gi|302862373|gb|EFL85306.1| ABC transporter, permease protein [Desulfovibrio sp. 3_1_syn3] Length = 375 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 152/366 (41%), Gaps = 7/366 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G W E D +A + ++ + + DT ++ ++ Sbjct: 17 LVSVGGRWNMEEPWPEEADAALAGIADQRVRELRLEANGLGRWDTSLLVFLVQMVKAARA 76 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ L + + + S +G + Sbjct: 77 RKLDVDLA-----LPEGLERLLHMAFAVPAQEGAARKKSDATFLSGLGDAALSLPPTVGD 131 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G V + K + + MY GV +P++ + S + G ++A GA Sbjct: 132 FLSFCGEVTLSIWRLFLGRSKMRSQ--DFVAAMYECGVQALPIISVTSMLFGLILAFVGA 189 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL+QFGA+I+ L+ I LR +G ++ V+++GR G+A A IG+M++NEE+DA+ T+ Sbjct: 190 VQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAALIGTMQVNEEVDALATL 249 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ V L+ PR+ AL +PLLT+ A+ ++G +V D+ + + Sbjct: 250 GISPVDFLVLPRVLALTAMVPLLTLYADLMGVLGGYLVGVMMLDLNPMEYINATTQMVPF 309 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ GL+ I + +G G + ++G+ TT VV SI +I+ + + Sbjct: 310 KHVLIGLVYGTVFGVVIAVAGCYQGMRCGRSAQAVGQATTTAVVHSIVGIIVATAAITVI 369 Query: 368 YFAIGI 373 +G+ Sbjct: 370 CNVLGV 375 >gi|167585308|ref|ZP_02377696.1| hypothetical protein BuboB_08232 [Burkholderia ubonensis Bu] Length = 374 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 97/368 (26%), Positives = 173/368 (47%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ V + + DLS I ID +G + + + Sbjct: 17 GPTVRLYGQWTALALARNRGAVARRVAGLAKGRVREWDLSGIERIDHVGGQALWRVWGRK 76 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 +S +F I R++ ++ +R + +G+ + F Sbjct: 77 LPDG--IALSETQRTIFERIERLDRQREAPERIER-------IDPVTRLGRALFTFAEHL 127 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + G V+ + +Y G +P+ L++F+ G V++ Sbjct: 128 QGGIAMFGRVMLDALSVLRRPKTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYL 185 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 186 SAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ L+ PR+ AL +++PLL + N A+ G ++ I F+ F Sbjct: 246 VMGIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKLALGIDFSFFVRSLPGVV 305 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 306 PIANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365 Query: 366 IFYFAIGI 373 + + +G+ Sbjct: 366 MLFQNVGL 373 >gi|163744195|ref|ZP_02151555.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] gi|161381013|gb|EDQ05422.1| ABC transporter, inner membrane subunit [Oceanibulbus indolifex HEL-45] Length = 376 Score = 235 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 130/370 (35%), Positives = 209/370 (56%), Gaps = 13/370 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G+ +++ + D + S ++++D++ + IDT GA +++ Sbjct: 18 GSRLSICGDLDIGKVACLDRDWLH----SEMHGASVIDIAGLARIDTAGAWVLIDLQAHA 73 Query: 66 --HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 G L+G + QL + + P +S + +G+ +V + Sbjct: 74 TVPGGAALEGATQAQAQLIETVRRSMLSDAVAAPPTKS-----VGDRLEILGRTVVLGAH 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + LG V++ G A + + L SL+ VG++ VP+V L+SF+ G V+A Sbjct: 129 KTVALISFLGQVVATMGGILAHPSRLR--LTSLVHHCQEVGLNAVPIVALMSFLIGVVLA 186 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QGA QL QFGAE+F +DL++I LRE+G+LLTA+++AGRSGSA A IGSMK+ EE+DA Sbjct: 187 FQGAAQLRQFGAEVFVVDLIAISVLRELGILLTAIIVAGRSGSAFTAAIGSMKMREEVDA 246 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+GLD V IL+ PR+ AL++ LP L +A+ S ++G +I+ W + AVF R S Sbjct: 247 MRTIGLDPVTILVVPRVLALMLMLPALGFIADISGLLGGAIMSWIDLGVSPAVFQMRLTS 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + G+IKAPF A IGI+ EG VG + SLG+ +T VV SI +VI+ D++ Sbjct: 307 NTDVWHFGVGMIKAPFFALIIGIIGCFEGLKVGGDAESLGRLTSTSVVLSIFMVIVADAM 366 Query: 364 FAIFYFAIGI 373 F+IF+ +G+ Sbjct: 367 FSIFFAIVGV 376 >gi|167617722|ref|ZP_02386353.1| ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257140414|ref|ZP_05588676.1| ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 374 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R +G W + ++ +V I + + DLS + +D +G + + + Sbjct: 19 TVRLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALWRVWGRRLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 L + + + + + G+ + F Sbjct: 79 AGI---------ALTDNQRTVFERIERLDAGREAPEPVVRIDPVTRFGQGLFTFGEHLYG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG +I + + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|118497851|ref|YP_898901.1| ABC transporter membrane protein [Francisella tularensis subsp. novicida U112] gi|194323824|ref|ZP_03057600.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] gi|254373206|ref|ZP_04988695.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. novicida GA99-3549] gi|118423757|gb|ABK90147.1| ABC-type transport system permease protein [Francisella novicida U112] gi|151570933|gb|EDN36587.1| ABC superfamily ATP binding cassette transporter [Francisella novicida GA99-3549] gi|194322188|gb|EDX19670.1| conserved hypothetical protein [Francisella tularensis subsp. novicida FTE] Length = 366 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 7/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FAG +I+ +V + +D++ I +DT GA I+ ++ Sbjct: 9 TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + H ++ +LI + S N Y +GK + + + Sbjct: 66 TKEDLVFDNHKDK--NLIELVANNFPTKVDKENSHKSNIVFTSIYTLGKNTNNLLQEVKA 123 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG ++ ++ F ++ Y + + +V+L+S + G V+ Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + Q+G +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+ Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D ++ L+ PRI ALIISLP+LT++A + IIG I+ I F R S + Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNV 301 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + GL+K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361 Query: 368 YFAIG 372 + Sbjct: 362 LNGVA 366 >gi|208779915|ref|ZP_03247259.1| conserved hypothetical protein [Francisella novicida FTG] gi|254374661|ref|ZP_04990142.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548] gi|151572380|gb|EDN38034.1| hypothetical protein FTDG_00836 [Francisella novicida GA99-3548] gi|208744370|gb|EDZ90670.1| conserved hypothetical protein [Francisella novicida FTG] Length = 366 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 7/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FAG +I+ +V + +D++ I +DT GA I+ ++ Sbjct: 9 TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + H ++ +LI + S N Y +GK + + + Sbjct: 66 TKEDLVFDNHKDK--NLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEVKA 123 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG ++ ++ F ++ Y + + +V+L+S + G V+ Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + Q+G +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+ Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D ++ L+ PRI ALIISLP+LT++A + IIG I+ I F R S + Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADVIAGITPLQFIERLFSNVNV 301 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + GL+K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361 Query: 368 YFAIG 372 + Sbjct: 362 LNGVA 366 >gi|332184385|gb|AEE26639.1| ABC-type transport system permease protein [Francisella cf. novicida 3523] Length = 366 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 109/365 (29%), Positives = 179/365 (49%), Gaps = 7/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FAG +I+ +V + +D++ I +DT GA I+ ++ Sbjct: 9 TIYFAGLLTLKQINP---KLVEKKISRTKVKLKQIDITKIQSLDTAGAYFILRVLKDLGL 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 K +++ ++ +LI + S N Y +GK + + + Sbjct: 66 TKKDLILNSDKDK--NLIELVANNFPTKIDKEYSHKSNIVFTSIYTLGKNTNNLLQEIKA 123 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG ++ +K F ++ Y + + +V+L+S + G V+ Sbjct: 124 SIGFLGAILLGYLTLIRKP--YKSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + Q+G +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+ Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D ++ L+ PRI ALIISLP+LT++A + IIG I+ I F R S + Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIIGGIIIADIIAGITPLQFIERLFSNVNV 301 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + GL+K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361 Query: 368 YFAIG 372 + Sbjct: 362 LNGVA 366 >gi|134297087|ref|YP_001120822.1| hypothetical protein Bcep1808_2996 [Burkholderia vietnamiensis G4] gi|134140244|gb|ABO55987.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4] Length = 374 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 170/366 (46%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ + + + DLS I +D +G + + + Sbjct: 19 TVRLYGQWTALALARNRGAITRRVAGLASARPREWDLSGIERLDHVGGQALWRVWGR--- 75 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 KL + ++ R + + P+R ++ L G I F Sbjct: 76 --KLPAGVELSDTQRTIFERIERLDSQREAPERVVRFDPVTRL----GLAIFTFGEHLQG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A IG M++ EE+DA+R M Sbjct: 188 QQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITARIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ L+ PR+ AL +++PLL + N A+ G ++ I F F + Sbjct: 248 GIPHGLRLVLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLAIDFNYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGVGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|56708309|ref|YP_170205.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670780|ref|YP_667337.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134301737|ref|YP_001121705.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|187931809|ref|YP_001891794.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|224457429|ref|ZP_03665902.1| ABC-type transport system permease protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370792|ref|ZP_04986797.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254875129|ref|ZP_05247839.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56604801|emb|CAG45880.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321113|emb|CAL09263.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134049514|gb|ABO46585.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569035|gb|EDN34689.1| ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|187712718|gb|ACD31015.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|254841128|gb|EET19564.1| ABC transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282159540|gb|ADA78931.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis NE061598] Length = 366 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 7/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FAG +I+ +V + +D++ I +DT GA I+ ++ Sbjct: 9 TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + H ++ +LI + S N Y +GK + + + Sbjct: 66 TKEDLVFDNHKDK--NLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKA 123 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG ++ ++ F ++ Y + + +V+L+S + G V+ Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + Q+G +IF +D++ I RE L TA++IAGRS SA +EIG MK+NEEIDA++T+ Sbjct: 182 NLMMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTI 241 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D ++ L+ PRI ALIISLP+LT++A + II I+ I F R S + Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNV 301 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + GL+K PF A I + +G AV S S+GK TT VV SI ++I++D++FA+ Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTTSVVYSIFLIIVVDAIFAVA 361 Query: 368 YFAIG 372 + Sbjct: 362 LNGVA 366 >gi|167579644|ref|ZP_02372518.1| ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 374 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R +G W + ++ +V I + + DLS + +D +G + + + Sbjct: 19 TARLSGQWTALALARDRGNVARRIARLAKEPVGEWDLSGVDRLDHVGGQALWRVWGRRLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 L + + + + + G+ + F Sbjct: 79 AGI---------ALTDNQRTVFERIERLDAGREAPEPVVRIDPVTRFGQGLFTFGEHLYG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG +I + + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIALLGGLIVDLLSVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + PR+ AL +++PLL + N A+ G ++ I F S + Sbjct: 248 GIPHGLRITLPRVLALGVAMPLLVMWTNIIALTGGALAAKFVLGIDLNFFVRSLPSVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|237749352|ref|ZP_04579832.1| ABC transport system permease [Oxalobacter formigenes OXCC13] gi|229380714|gb|EEO30805.1| ABC transport system permease [Oxalobacter formigenes OXCC13] Length = 374 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 13/370 (3%) Query: 5 GITVFRFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G W+ ++ + + I+ + DL+ I E+D I A+ + Sbjct: 15 DASKVVARGCWRVEVLASAGTINRLKSTIHSYSGKTGIVWDLTRIRELDYISAQFLWESW 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ + F+ + + K+ + + + F+N+ + K Sbjct: 75 GEKRPANLA--LTEEQGRFFARLEQAGQLKLPDTTKPFLWPWQRFRNI-------VHKVS 125 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++G ++ + F + +G + +Y+ G + + ++ F+ G V+ Sbjct: 126 EHFSGMVALVGQLMIDIVNFAKAPR--RGPWTEISANIYHAGAQALGITAVVGFLIGVVL 183 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + A QL FG ++F ++L+ I LRE+G LL A+++AGRSGS++ A++G M++ EE+ Sbjct: 184 SYLSAQQLHMFGGDVFLVNLLGISVLRELGPLLAAILVAGRSGSSMTAQLGVMRVTEELS 243 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MGL LI P++ AL I +PLL I + A++G + + + F + Sbjct: 244 AMQVMGLPQGFRLIMPKVIALSIVMPLLVIWTDVIALLGGMLAGSYEIGLSMSYFLASLP 303 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +AN + G+ K I ++A G + ++ SLG+ T VV SI++VI+ D+ Sbjct: 304 DAVPIANFWIGVGKGYVFGILIALIACYYGLKIKPNTESLGEGTTRSVVTSITVVILADA 363 Query: 363 LFAIFYFAIG 372 +FAI +G Sbjct: 364 IFAIVLQGVG 373 >gi|77920339|ref|YP_358154.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380] gi|77546422|gb|ABA89984.1| ABC-type transport system, permease component [Pelobacter carbinolicus DSM 2380] Length = 386 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 101/375 (26%), Positives = 174/375 (46%), Gaps = 14/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ I FAG + + + ++ + +++ I D G L M Sbjct: 23 NDAEILSLSFAGKLDAAATALLWKPLLE-LAHQTAPRLLLIEADQINYCDGAGIGLFMEL 81 Query: 62 MEKYHGKI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + +L+G+ +L+SL ++ +P L IG++ Sbjct: 82 ARQQQKRQQRFELKGLKEEFARLWSLYRPEDFMDLRGSRPHPC-------CLPEEIGRQA 134 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 A G + S + + M GV+ +P+V LISF+ Sbjct: 135 CLAGQGIVDMARFTGELTSALLHAARHPRSVR--WPEVWLVMEKAGVNSLPIVGLISFLI 192 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A Q + QFG EI+ +L ++ LRE+G L+TA+++AGRS SA AE+G+MKIN Sbjct: 193 GLIMAFQATIPMRQFGVEIYVANLTALSMLRELGPLMTALLLAGRSSSAFAAELGTMKIN 252 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ TMGL + L+ R+ A +I LPLL++ AN +IG ++V P + Sbjct: 253 EEIDALTTMGLAPIPFLVVTRVLATVIILPLLSLFANLMGLIGGAVV-LLSLGYPLVTYT 311 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + L ++ GL+K A + V G ++++G T VV I +++ Sbjct: 312 NQVKAAVNLGDLTGGLVKTLVFALIVAGVGCLYGLKTRSGASAVGDSATRAVVSGIILIV 371 Query: 359 IIDSLFAIFYFAIGI 373 + D LFA+ Y+ +GI Sbjct: 372 VADGLFAVVYYFLGI 386 >gi|241668212|ref|ZP_04755790.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876747|ref|ZP_05249457.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842768|gb|EET21182.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 365 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 107/359 (29%), Positives = 178/359 (49%), Gaps = 7/359 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 F G +I ++ + D +DL+ +T +DT GA +I+ + Sbjct: 9 TIYFEGILTLKQID---SKLIDKKISRSKDDIKQIDLTKVTLLDTAGAYIIIKTAKNLRL 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + ++ +L+ + + + S N N Y +GK +++ + Sbjct: 66 SKENIIFANEKDK--NLVDIVFKNFPSTAEEELSNKSNVVFNSIYTLGKNTNNLLSEVKT 123 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +K F ++ Y + + +VIL+S + G V+ Sbjct: 124 SISFLGAIFLGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPL 181 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L Q+G +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+ Sbjct: 182 NLLMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D ++ L+ PRI AL+ISLP+LT++A + I G I+ I F R S + Sbjct: 242 GEDPMQRLVLPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNV 301 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + GL+K PF A I + +G +V S S+GK TT VV SI ++I++D++FA+ Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360 >gi|239907930|ref|YP_002954671.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797796|dbj|BAH76785.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 384 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 89/376 (23%), Positives = 173/376 (46%), Gaps = 12/376 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE---L 57 ++ G+ F+G+W+ + + V A+ S ++ +T D++ Sbjct: 18 VASGGVVTLTFSGSWRMDQTLPDIEAVRQALAASPAPQKLVLAGEGVTGWDSLFLTQCRA 77 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 I+ + + + +E L +L + ++ + +R+ F ++ Y + Sbjct: 78 IIALARERGVAVDAGALPPGVESLLALAAKVPERQGAARAAKRTPFLERMADMGYGAAQG 137 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + ++ G V + L +Y + + +V LISF+ Sbjct: 138 VRNLLD-------FTGDVTLAAWALVTG--RAVFQRSQLTTLIYQASIDALGIVSLISFL 188 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+M++ Sbjct: 189 VGLILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQV 248 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+RT G + L+ PR+ AL++ +PLL I A+ I+G +V I + Sbjct: 249 NEEIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADLMGIMGGFVVGVFMLKINPIQY 308 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + LAN + GL+ + + + G G + +G+ T VV SI + Sbjct: 309 LTHTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALGVGQATTAAVVTSILAI 368 Query: 358 IIIDSLFAIFYFAIGI 373 +I ++ + IG+ Sbjct: 369 VIATAILTVCCNIIGV 384 >gi|323700846|ref|ZP_08112758.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132] gi|323460778|gb|EGB16643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans ND132] Length = 381 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 93/374 (24%), Positives = 174/374 (46%), Gaps = 14/374 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G V +G + + + + V + S D +T +D G L++ Sbjct: 19 RDGGLVLALSGRLDAAGTTAVWAEAVKGASGS-GFSRLTADCGGVTYMDGSGVALLLKLK 77 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 E + I+L + +L L P++ + L +G Sbjct: 78 ELCAEKKAAIELTNLREEDSRLVDL-------TWDTALPKQRDSERERRGLAEAVGAAGG 130 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + ++ +G S G + ++ VGV + +++LI F+ G Sbjct: 131 ELWHNVREMIAFVGESFSLLGRAAVHPGMVR--WKDVVLACINVGVESMFIIVLIGFLMG 188 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +++ Q A L +FG EIF +++ ++ RE+G L+T++++A RSGSA AEIG+MKINE Sbjct: 189 LIMSFQSAISLQRFGGEIFVPNMLGLVMFREMGPLVTSILLAARSGSAFAAEIGTMKINE 248 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ TMGL +R L+ P++ A + +PL+T+ N ++++G ++V+ P F S Sbjct: 249 ELDALTTMGLSPMRFLVVPKLLATMAMVPLMTMFFNLASLVGGALVM-LSMGYPLVTFTS 307 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 R + + + + G+ K + + V G ++++G T+ VV I ++ Sbjct: 308 RVFANVSATDFWGGMAKGLVFSFLVAGVGCLRGMQTRSGASAVGLSTTSAVVSGIILIAF 367 Query: 360 IDSLFAIFYFAIGI 373 D LFA+ Y+ +GI Sbjct: 368 ADGLFAVAYYYLGI 381 >gi|296134762|ref|YP_003642004.1| protein of unknown function DUF140 [Thiomonas intermedia K12] gi|295794884|gb|ADG29674.1| protein of unknown function DUF140 [Thiomonas intermedia K12] Length = 380 Score = 232 bits (593), Expect = 5e-59, Method: Composition-based stats. Identities = 100/366 (27%), Positives = 185/366 (50%), Gaps = 14/366 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G W + ++ + + + +D SA T +DT GA L++ M ++ Sbjct: 27 RRVCRLQGAWNAQGLAREPNTHL-----PAGTRHVTLDASA-TTLDTPGALLLVRSMAQW 80 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 VS L+ ++ + L IG+ + +++ Sbjct: 81 QSAGATVDVSGLSPPQQQLLDLVRQRALALPP------AARRLGLLGDIGRATLIALDEL 134 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G ++ ++ + +I ++ G+ + ++ L+SF+ G V+A Q Sbjct: 135 RALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVMAYQ 192 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L+ +GA I ++L+SI+ LRE+G LLTA+++AGR+GS+ A+IG+M+I EE+DA+R Sbjct: 193 AGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDALR 252 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +GL +L+ P++ AL+I+LPLL + A+ + G +V Y +P + + +R Sbjct: 253 ALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQVV 312 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + GL+KAP A I +V +G V + ++G+ T VVQ+I +VI+ID+ F+ Sbjct: 313 GLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASFS 372 Query: 366 IFYFAI 371 + Y + Sbjct: 373 VLYNLL 378 >gi|89256086|ref|YP_513448.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314562|ref|YP_763285.1| ABC transporter ATP-binding protein [Francisella tularensis subsp. holarctica OSU18] gi|156502103|ref|YP_001428168.1| ABC transporter membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010771|ref|ZP_02275702.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|254367414|ref|ZP_04983440.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|290954528|ref|ZP_06559149.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|295312044|ref|ZP_06802859.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica URFT1] gi|89143917|emb|CAJ79136.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129461|gb|ABI82648.1| ABC superfamily ATP binding cassette transporter, ABC protein [Francisella tularensis subsp. holarctica OSU18] gi|134253230|gb|EBA52324.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|156252706|gb|ABU61212.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 366 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 7/365 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FAG +I+ +V + +D++ I +DT GA I+ ++ Sbjct: 9 TVYFAGLLTLKQINP---KLVEKKVSRSKVKLNRIDITKIQALDTAGAYFILKVLKDLEL 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + H ++ +LI + S N Y +GK + + + Sbjct: 66 TKEDLIFDNHKDK--NLIELVANNFPTRVDKENSHKSNIVFTSIYTLGKNTNNLLQEIKA 123 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG ++ ++ F ++ Y + + +V+L+S + G V+ Sbjct: 124 SIGFLGAILLGYLTLIRKP--YRSFFSIVLNIAYDSTIKALSIVMLLSLIIGLVLTYLPL 181 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + Q+ +IF +D++ I RE L TA++IAGRS SA +EIG MK+NEEIDA++T+ Sbjct: 182 NLMMQYSTQIFVVDMLGISSFREFAPLFTAIIIAGRSSSAFTSEIGIMKVNEEIDALQTI 241 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D ++ L+ PRI ALIISLP+LT++A + II I+ I F R S + Sbjct: 242 GEDPIQRLVLPRITALIISLPVLTVIAMIANIISGIIIADVIAGITPLQFIERLFSNVNV 301 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + GL+K PF A I + +G AV S S+GK T VV SI ++I+ID++FA+ Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLAVRRDSQSVGKATTNSVVYSIFLIIVIDAIFAVA 361 Query: 368 YFAIG 372 + Sbjct: 362 LNGVA 366 >gi|88706598|ref|ZP_01104301.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter litoralis KT71] gi|88699094|gb|EAQ96210.1| conserved hypothetical protein, membrane (DUF140) [Congregibacter litoralis KT71] Length = 370 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 17/376 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEID---TIGAEL 57 +S +G + +G+W S E+ + + DS VD+S +++ D G Sbjct: 9 LSADGD-QLQISGDWTSAELPALVPLFTTLLE---TRDSPAVDVSEVSDWDPRLEAGLLR 64 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + I+ G QL +L + + F + IG Sbjct: 65 LQRLAQAKARDIRYLGAPDSQTQLMNLATAVAPYEAPAASATGFFSTKQLRRSLADIG-- 122 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +D LG V + + + G + ++ L S + Sbjct: 123 -----DDLLDSLEFLGGVGIALWRTLTGRSGMRR--REFVESLAQAGPQAIGIITLTSIL 175 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A GA QL QFGA +F DL++I LRE+G L+TAV++AGR+G+A A++ +M+ Sbjct: 176 VGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAVVMAGRTGAAYAAQLSTMQT 235 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDAI T+G+D + L++PR+ AL + +PLL + A+ + V+ + + Sbjct: 236 NEEIDAISTLGIDPMEFLVAPRVLALFLMMPLLVVYADALGV-LGGAVVAGGMGVTPLQY 294 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S+ + T + F G+ K A I + G G +S ++G+ T VV ++ + Sbjct: 295 ISQLSAAITPTHFFVGIFKGFVFAALIATAGCRAGMNAGRNSEAVGQATTEAVVTAVVYL 354 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D+ I + I Sbjct: 355 IVADAGINILCQLLDI 370 >gi|167717852|ref|ZP_02401088.1| ABC transporter, permease protein [Burkholderia pseudomallei DM98] Length = 374 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 17 GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 76 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 L + + + S + G+ + F Sbjct: 77 ---------LPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 127 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG +I + + +Y G +P+ L++F+ G V++ Sbjct: 128 YGGIALLGSLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 185 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 186 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + PR+ AL +++PLL + N A+ G ++ I F S Sbjct: 246 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 305 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 306 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365 Query: 366 IFYFAIGI 373 I + +G+ Sbjct: 366 ILFQNVGL 373 >gi|294338723|emb|CAZ87055.1| putative ABC-type transport system, permease component [Thiomonas sp. 3As] Length = 380 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 184/366 (50%), Gaps = 14/366 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G W + ++ + + + +D SA T +DT GA L++ M ++ Sbjct: 27 RRVCRLQGAWNAQGLAREPNTHL-----PAGTRHVTLDASA-TTLDTPGALLLVRSMAQW 80 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 S L+ ++ + L IG+ + +++ Sbjct: 81 QSAGATVDASGLSPPQQQLLDLVRQRALALPP------AARRLGLLGDIGRATLIALDEL 134 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G ++ ++ + +I ++ G+ + ++ L+SF+ G V+A Q Sbjct: 135 RALLAFVGELVWRGAPLLLQPWRVR--WREVIHEIDAAGLRAIGIIGLLSFLIGMVMAYQ 192 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L+ +GA I ++L+SI+ LRE+G LLTA+++AGR+GS+ A+IG+M+I EE+DA+R Sbjct: 193 AGATLATYGANILIVNLVSIITLRELGPLLTAILVAGRTGSSYTAQIGTMRITEEVDALR 252 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +GL +L+ P++ AL+I+LPLL + A+ + G +V Y +P + + +R Sbjct: 253 ALGLSPFEMLVLPKVIALVITLPLLALFADVMGLAGGGVVAAVGYGVPLSEYVARIPQVV 312 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L + GL+KAP A I +V +G V + ++G+ T VVQ+I +VI+ID+ F+ Sbjct: 313 GLKTLVLGLVKAPVFAVVIALVGCMQGLRVAGSAAAVGRATTVSVVQAIFLVIVIDASFS 372 Query: 366 IFYFAI 371 + Y + Sbjct: 373 VLYNLL 378 >gi|167627644|ref|YP_001678144.1| ABC-type transport system permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597645|gb|ABZ87643.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 365 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 107/359 (29%), Positives = 177/359 (49%), Gaps = 7/359 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 F G +I ++ + D DL+ +T +DT GA +I+ + Sbjct: 9 TIYFEGILTLKQID---SKLIDKKISRSKDDIKQFDLTKVTLLDTAGAYIIIKTAKNLSL 65 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + + ++ +L+ + + + S N N Y +GK +++ + Sbjct: 66 SKENIIFANEKDK--NLVDIVFKNFPSTAEEELSSKSNVVFNSIYTLGKNTNNLLSEIKT 123 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + +K F ++ Y + + +VIL+S + G V+ Sbjct: 124 SISFLGAIFLGYITLIRRP--YKAFFSIVLNICYDSTIRALSIVILLSLIIGLVLTYLPL 181 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L Q+G +IF +D++ I RE L TA++IAGRSGSA +EIG MK+NEEIDA++T+ Sbjct: 182 NLLMQYGTQIFVVDMLGISSFREFAPLFTAIIIAGRSGSAFTSEIGIMKVNEEIDALQTI 241 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G D ++ L+ PRI AL+ISLP+LT++A + I G I+ I F R S + Sbjct: 242 GEDPMQRLVLPRITALVISLPVLTVIAMIANIAGGIIIADLIAGITPLQFIERLFSNVNV 301 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + GL+K PF A I + +G +V S S+GK TT VV SI ++I++D++FA+ Sbjct: 302 NHFYIGLLKTPFFALVIAGIGCHQGLSVKRDSQSVGKATTTSVVYSIFLIILVDAIFAV 360 >gi|254176752|ref|ZP_04883409.1| putative ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254202028|ref|ZP_04908392.1| putative ABC transporter, permease protein [Burkholderia mallei FMH] gi|254207359|ref|ZP_04913710.1| putative ABC transporter, permease protein [Burkholderia mallei JHU] gi|147747922|gb|EDK54998.1| putative ABC transporter, permease protein [Burkholderia mallei FMH] gi|147752901|gb|EDK59967.1| putative ABC transporter, permease protein [Burkholderia mallei JHU] gi|160697793|gb|EDP87763.1| putative ABC transporter, permease protein [Burkholderia mallei ATCC 10399] Length = 374 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 17 GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 76 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 L ++ + + S + G+ + F Sbjct: 77 ---------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 127 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG +I + + +Y G +P+ L++F+ G V++ Sbjct: 128 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 185 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 186 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + PR+ AL +++PLL + N A+ G ++ I F S Sbjct: 246 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 305 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 306 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365 Query: 366 IFYFAIGI 373 I + +G+ Sbjct: 366 ILFQNVGL 373 >gi|53718041|ref|YP_107027.1| hypothetical protein BPSL0401 [Burkholderia pseudomallei K96243] gi|76809874|ref|YP_332026.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|126441439|ref|YP_001057484.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126452246|ref|YP_001064733.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134279780|ref|ZP_01766492.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167736870|ref|ZP_02409644.1| ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167813976|ref|ZP_02445656.1| ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167822497|ref|ZP_02453968.1| ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167844078|ref|ZP_02469586.1| ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167892582|ref|ZP_02479984.1| ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167901079|ref|ZP_02488284.1| ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167909299|ref|ZP_02496390.1| ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167917331|ref|ZP_02504422.1| ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|226193717|ref|ZP_03789320.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237810635|ref|YP_002895086.1| putative ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242316672|ref|ZP_04815688.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254181998|ref|ZP_04888595.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254187927|ref|ZP_04894439.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254196514|ref|ZP_04902938.1| putative ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254260256|ref|ZP_04951310.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254295953|ref|ZP_04963410.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|52208455|emb|CAH34389.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76579327|gb|ABA48802.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|126220932|gb|ABN84438.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126225888|gb|ABN89428.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134248980|gb|EBA49062.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|157805700|gb|EDO82870.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157935607|gb|EDO91277.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169653257|gb|EDS85950.1| putative ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184212536|gb|EDU09579.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|225934295|gb|EEH30279.1| putative ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237504399|gb|ACQ96717.1| putative ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242139911|gb|EES26313.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254218945|gb|EET08329.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 374 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 17 GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 76 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 L + + + S + G+ + F Sbjct: 77 ---------LPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 127 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG +I + + +Y G +P+ L++F+ G V++ Sbjct: 128 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 185 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 186 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 245 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + PR+ AL +++PLL + N A+ G ++ I F S Sbjct: 246 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 305 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 306 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 365 Query: 366 IFYFAIGI 373 I + +G+ Sbjct: 366 ILFQNVGL 373 >gi|32266623|ref|NP_860655.1| hypothetical protein HH1124 [Helicobacter hepaticus ATCC 51449] gi|32262674|gb|AAP77721.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 348 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 4/350 (1%) Query: 24 ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFS 83 I +D +++ D + I + ++ G +T ++F Sbjct: 3 KKQREALSEAIISQHKLTIDFKRVSKADFVFCAFIYGLI--VDKDTQIIGTNTRTNEIFQ 60 Query: 84 LISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFC 143 +S + K+ + +F + +GK+I +F + + G+ + Sbjct: 61 TLSSSLPKENEENAINNAFSLKISHMVLIPLGKRIEQFFESFLNFLNFCGMCLWYFFLSL 120 Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 S +FK S+ M G +PV +L +F+ IA QG QL + G + S++++ Sbjct: 121 LSPRRFKC--GSIFYHMNEAGFKALPVALLTAFIVSYAIALQGVLQLEKMGVPLMSVEIV 178 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + L LRE+G + A++IAGRS SA A++G M + EE DA++TM L LI PR+ AL Sbjct: 179 AKLSLRELGPFILAIVIAGRSSSAFSAQLGVMNLTEENDALKTMNLSLFDYLILPRVLAL 238 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 II +PLL LA+ ++ A + + I F + RF+ + + G+IKAPF A Sbjct: 239 IIVMPLLVFLADSVSLFAAMLAVKMQTGINFMQYLERFYEYVGINHFLVGMIKAPFFGAA 298 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 I +V G V + S+G + T VV ++ VI+I+++F++ + I Sbjct: 299 IALVGCFRGLYVKGDTESIGLETTKSVVNALFWVILINAIFSVITTRLDI 348 >gi|237752254|ref|ZP_04582734.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC BAA-430] gi|229376496|gb|EEO26587.1| toluene ABC transporter permease [Helicobacter winghamensis ATCC BAA-430] Length = 373 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 96/357 (26%), Positives = 168/357 (47%), Gaps = 12/357 (3%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75 + + D + + K A D +D G E+++ ++E ++ Sbjct: 28 TLNALYTLLDTLKKSPQKVRIQKDASFD------LDFCGGEVLINWLEHLSECCTIENTL 81 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 + + + K +K + K+ + + + LG + Sbjct: 82 LEHSKTAEIFAILQSKTTLEKKEFTQDVIQAHKDTLEI----LKVWGSRLVITLSFLGEI 137 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + F+ +L Q+ + VP++ L F+ G VIA QG+ QL QFGA Sbjct: 138 VYLLYHSVLNPRDFRI--RALFFQIQEAVIKAVPIISLACFLIGIVIAYQGSLQLRQFGA 195 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + +++ ++L LRE+ ++ A+++AGRS SA AEIG M+ +EIDA+R MG + V L Sbjct: 196 SVLIVEMSAMLTLREMAPIIVAIIVAGRSASAFSAEIGMMRATQEIDAMRVMGFNPVTFL 255 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 I PRI+AL+ +LPL+ +A+ ++G ++ I F RF T + + + G++ Sbjct: 256 IFPRIFALLFALPLVVFVADMFGLLGGMLISQLQLGISSEHFIERFLQTVEMRHFWIGML 315 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 KAPF IG++ GFA + S+G T VV+SI VI D+L ++ + IG Sbjct: 316 KAPFFGLIIGLIGCYHGFATQKDTRSIGVHTTKSVVESIFCVIAFDALCSVLFTQIG 372 >gi|283853770|ref|ZP_06370995.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283570832|gb|EFC18867.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 385 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 88/353 (24%), Positives = 160/353 (45%), Gaps = 12/353 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMY 60 NGI +G W+ V A+ S + +A+T D+ ++ Sbjct: 22 NGILTLTLSGVWRLDRPFPPLAPVKDALATSPAPRKLVFAATAVTGWDSRFLADCRAVLV 81 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + ++++ G+ L L + ++ +K + +G + Sbjct: 82 LARERGVEVEVSGLPEGAASLLDLAAKVPERQGAARKTSHA-------AFLESMGDLGLG 134 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + LG V + +L+ +Y GV +P+V LIS + G Sbjct: 135 FAQGVVNLLEFLGEVTLACLALLRG--RAVFQRSNLVTLIYQAGVEALPIVSLISLLVGL 192 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+M++NEE Sbjct: 193 ILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVNEE 252 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++T G + L+ PR+ AL++ LPLL + A+ I+G IV I + + Sbjct: 253 IDALKTFGFSPTQFLVLPRMIALVLMLPLLCVYADLMGILGGFIVGVFMLHINPIQYLTH 312 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + LAN + GL+ + + + G G + ++G+ T+ VV Sbjct: 313 TWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQAATSAVVTG 365 >gi|254480123|ref|ZP_05093371.1| conserved domain protein [marine gamma proteobacterium HTCC2148] gi|214039685|gb|EEB80344.1| conserved domain protein [marine gamma proteobacterium HTCC2148] Length = 376 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 15/377 (3%) Query: 1 MSEN-GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 ++E+ + V G+W + + + I + +VD S + D++ ++ Sbjct: 11 LTEDREVAVLLLTGDWVQGQSHRDFHVLKDDLLG-ITASELVVDGSQLGLWDSVLMAFLL 69 Query: 60 YFMEKYHGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 + + + + IE+L + + + ++ + S G Sbjct: 70 QSFNQCREDNIVFRTRALPDGIERLLDVATAVPTHVPPSAPNKQWYESFSP-------GS 122 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +++ + +G + + Y G ++ L S Sbjct: 123 LVLELWESTVESLAFIGELGIALWRLALGKANTR--FSDFRTFCYQAGPDAFAIISLTSV 180 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G ++A GA QL QFGAE++ DL+ I LRE+GVL+ A+++AGR+G+A A++G+M+ Sbjct: 181 LVGMILAYLGAVQLQQFGAEVYVADLVVIGMLREMGVLMAAIVMAGRTGAAYAAQLGTMQ 240 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 NEEIDAIRTMG+ + L+ PR+ AL++++PLLT+ AN I ++ + + Sbjct: 241 ANEEIDAIRTMGISPMEFLVVPRMLALVVAMPLLTLYANLL-GIIGGGIVSGGLGVTPLM 299 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + S + L+++ GLIK+ I + + G G S ++G+ T VV +I Sbjct: 300 YISEGETALQLSHLSVGLIKSVVFGVLIAVAGCRSGINSGRSSAAVGQAATQAVVTAIVY 359 Query: 357 VIIIDSLFAIFYFAIGI 373 +I+ D+ I + +GI Sbjct: 360 LIVADAAINILFQQVGI 376 >gi|303247224|ref|ZP_07333498.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302491383|gb|EFL51271.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 368 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 89/354 (25%), Positives = 160/354 (45%), Gaps = 12/354 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE---LIM 59 +G+ F+G W+ S + A+ KS + + + +T+ D+ I+ Sbjct: 4 SDGVLTLTFSGTWRIDRPSPDLSPIRAALGKSPAPKTLAFESAKVTDWDSRFLTQCRAIL 63 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + + L G+ + L L ++ +K + F ++ Sbjct: 64 ALAKAHGVTPDLSGLPAGAKSLLELAEKVPERQGAARKEASTPFLTRVADM-------AF 116 Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G V + +L +Y GV +P+V LIS + G Sbjct: 117 GAWQGVHNLLDFVGDVTLACLALAGG--RAVFQRSNLFALIYQAGVEALPIVSLISLLVG 174 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++A GA QLSQFGA+I+ ++ I +R +G ++T +++AGR+G+A AE+G+M++NE Sbjct: 175 LILAFVGAIQLSQFGAQIYVSTIVGIAMVRVMGAIMTGIIMAGRTGAAYAAELGTMQVNE 234 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+RT G + L+ PR+ AL++ +PLL I A+ I+G IV I + + Sbjct: 235 EIDALRTFGFSPTQFLVLPRMIALVLMMPLLCIYADIMGILGGFIVGVFMLKINPIQYLT 294 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + LAN + GL+ + + + G G + ++G+ T VV S Sbjct: 295 HTWQSVPLANFWIGLVHSTVFGVLVAMAGCYRGMRCGRSALAVGQATTAAVVTS 348 >gi|224437093|ref|ZP_03658074.1| hypothetical protein HcinC1_03955 [Helicobacter cinaedi CCUG 18818] gi|313143563|ref|ZP_07805756.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818] gi|313128594|gb|EFR46211.1| ABC transport system permease [Helicobacter cinaedi CCUG 18818] Length = 367 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 11/370 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G + +F G + + S ++ +D IT++D + I +E Sbjct: 9 SGRMLIKFQG---ACDYSLDKKSKDFLSKLISANERITLDFLEITKVDFVFCAFIYGLLE 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ + ++++F + + K ++ S FY + + GK + Sbjct: 66 --GKDYEILNADSQVKEIFQSMVESLPKLENSKSKSHSMFYGALFDF----GKFCERSYQ 119 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S + G+ C + FK L S++ + G +PV +L +F+ IA Sbjct: 120 SSLDFLNFFGMCSFYFFRSCWNLRHFK--LGSIMYHINESGFKALPVALLTAFIVSYAIA 177 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 QG QL + G + S+++++ L LRE+G + A++IAGRS S+ A+IG M + EE DA Sbjct: 178 LQGVLQLEKMGVPLMSVEIVAKLSLREMGPFILAIVIAGRSSSSFAAQIGVMNLTEENDA 237 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++TM L +I PRI AL+I +PLL LA+ ++ + I + F + RF+ Sbjct: 238 LKTMNLSLFDYIILPRILALVIIMPLLVFLADAVSLFACFLAINMQTGLDFMQYLERFYE 297 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + N + G+IKAPF A+ +V G V + S+G + T VV +I VI+I+++ Sbjct: 298 YVGINNFWVGVIKAPFFGAAVALVGCFRGLYVKGDTESVGIETTKSVVNAIFWVILINAI 357 Query: 364 FAIFYFAIGI 373 F+I + I Sbjct: 358 FSIITTGLNI 367 >gi|67642420|ref|ZP_00441177.1| putative ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|121598966|ref|YP_991583.1| putative ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126450485|ref|YP_001082718.1| putative ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|251768288|ref|ZP_02270158.2| putative ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254357616|ref|ZP_04973890.1| putative ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|121227776|gb|ABM50294.1| putative ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126243355|gb|ABO06448.1| putative ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|148026680|gb|EDK84765.1| putative ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|238523569|gb|EEP87007.1| putative ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|243060282|gb|EES42468.1| putative ABC transporter, permease protein [Burkholderia mallei PRL-20] Length = 366 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 9 GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 68 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 L ++ + + S + G+ + F Sbjct: 69 ---------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 119 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG +I + + +Y G +P+ L++F+ G V++ Sbjct: 120 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 177 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 178 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 237 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + PR+ AL +++PLL + N A+ G ++ I F S Sbjct: 238 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 297 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 298 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 357 Query: 366 IFYFAIGI 373 I + +G+ Sbjct: 358 ILFQNVGL 365 >gi|217419400|ref|ZP_03450906.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|217396704|gb|EEC36720.1| putative ABC transporter, permease protein [Burkholderia pseudomallei 576] Length = 366 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 11/368 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 9 GRTVRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR 68 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 L + + + S + G+ + F Sbjct: 69 ---------LPDGIALTDNQRVVFERIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHL 119 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +LG +I + + +Y G +P+ L++F+ G V++ Sbjct: 120 YGGIALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYL 177 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 178 SAQQLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMR 237 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ + PR+ AL +++PLL + N A+ G ++ I F S Sbjct: 238 VMGIPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVV 297 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FA Sbjct: 298 PIANLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFA 357 Query: 366 IFYFAIGI 373 I + +G+ Sbjct: 358 ILFQNVGL 365 >gi|297569477|ref|YP_003690821.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] gi|296925392|gb|ADH86202.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 96/372 (25%), Positives = 176/372 (47%), Gaps = 15/372 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G + AG+W E++ + + + A L + +D+ GA L+ Sbjct: 10 ARDGR---QLAGSWTLGELARHLAAIRPQLQATPAG--ASWSLREVERLDSFGAMLLWQH 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + K ++L +I+ + F + +G + F Sbjct: 65 WGRSWPKNLEIN-----DELRGVIAAVAAHSGRPLPRPHRF---TLLEALVLLGSMLFTF 116 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +LG ++ + ++ L L MY VGV +PV L+ F+ G V Sbjct: 117 LGHARDLVTLLGQLLLDLLFLVRHPRQWP--LRELSANMYKVGVKAMPVAALVGFLIGVV 174 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ A QL FG E++ ID++ + +RE+G +L A+++AGRSGSA+ A++G M++ EEI Sbjct: 175 LSYLSAMQLEAFGVEVYLIDILGLGIIRELGPVLVAILVAGRSGSAMTAQLGVMRVTEEI 234 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+ L+ P++ AL + +PLL + + A++G + I FA F + Sbjct: 235 DALAAMGISRTIRLVLPKVLALTLVMPLLVLWTSAVALLGGMLSANMQLGISFAFFMEKL 294 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +AN++ GL K I +VA G + ++ SL T VV +I+ VI++D Sbjct: 295 PQVVPIANLYIGLGKGAVFGLLIALVACHFGLRIRPNTESLAAHTTASVVTAITTVILVD 354 Query: 362 SLFAIFYFAIGI 373 ++FA+ +G+ Sbjct: 355 AVFAVMLRNVGV 366 >gi|317401487|gb|EFV82119.1| integral membrane protein [Achromobacter xylosoxidans C54] Length = 377 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 96/367 (26%), Positives = 180/367 (49%), Gaps = 11/367 (2%) Query: 8 VFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V G+W ++E + + A A DL I+ +DTIGA LI + Sbjct: 21 VCHVGGDWSVLALAEPGEVERRRAAMAKATDAGARWDLQGISRLDTIGALLIWQAWGEKL 80 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + S + +F+ ++ K +P+ ++ +G +++ + Sbjct: 81 P--ERVRWSAGQQDVFTALATNKGGKQALPRPEPAW------GWLRALGGAVLQAGENGR 132 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +LG ++ + + +G + Q+Y G + + L+ F+ G V++ Sbjct: 133 ALLTMLGQLVLDLFGMLSRPS--RGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLS 190 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ Sbjct: 191 AQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLV 250 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ + LI PR+ AL +++PLL + + AI+G + + F + Sbjct: 251 MGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQVQLGVSAQWFLQSLPDAIS 310 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L N + G++K I ++A G + ++ SLG+ TT VV SI+ VI++D+L+A+ Sbjct: 311 LTNYWIGILKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDALYAV 370 Query: 367 FYFAIGI 373 + ++GI Sbjct: 371 IFSSVGI 377 >gi|192359616|ref|YP_001982090.1| ABC-type transport system, permease [Cellvibrio japonicus Ueda107] gi|190685781|gb|ACE83459.1| ABC-type transport system, permease component [Cellvibrio japonicus Ueda107] Length = 375 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 87/366 (23%), Positives = 168/366 (45%), Gaps = 12/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + GNW+ + A + S + + ++ + D+ A ++ Sbjct: 22 ILCLYGNWQLGSAPDGATLCASLMAASGTTQTLQLNTDQLGTWDSSLAIALLQLARWCDT 81 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + E L L+ + + + + Sbjct: 82 HQITLDIRAVPEGLQQLLRLATAIPPHQPSQSNDRHPWH---------QSLQDAWQGTRT 132 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G ++ K + ++ + G + +V LI+ + G ++A G+ Sbjct: 133 TLIFIGDTSLALSQWVRGQAKTRRSDIAFF--IEQAGPRALAIVTLIALLVGMILAYLGS 190 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL Q GA+++ DL+++ +RE+G L+TAV++AGR+G+A A++G+M++NEEIDA++TM Sbjct: 191 VQLRQLGAQVYVADLVALGMVREMGALMTAVIMAGRTGAAYAAQLGTMQVNEEIDALKTM 250 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ + L+ PR+ AL++ +PLL I AN ++G ++V D+ F + + Sbjct: 251 GISSIEFLVLPRLLALVLVMPLLCIYANVIGMVGGALVATS-MDVNFIQYILQTQGAVGW 309 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +I TGL+K+ F I I + G G +S+++G T VV++I +++ D+ F I Sbjct: 310 VDISTGLVKSVFFGVLIAIAGCQAGIHCGRNSDAVGMAATNAVVRAIVYLVVADAAFNIL 369 Query: 368 YFAIGI 373 Y +GI Sbjct: 370 YDKLGI 375 >gi|139001578|dbj|BAF51698.1| putative innermembrane component of ABC transporter system [Sphingobium japonicum] Length = 316 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 174/323 (53%), Gaps = 9/323 (2%) Query: 50 IDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 +DTIGA ++ +++ + G E+L + + R ++ Sbjct: 1 MDTIGAWVLHRAIKRLDCG--ITGDKCDAERLIATVGSVDE-----PVNIRPDHEPPWQR 53 Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ +V G + T +F+ +++++ VGVS + Sbjct: 54 VVGQIGEAVVNSGTTLLGLLGFFGGTLVATWNVIRHPGRFRIN--AVVQRFEVVGVSALG 111 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ L+SF+ G VIAQQG+ QL QFG E+ +I+L+ L RE+GVL+TA+M+AGRSGSA Sbjct: 112 IIGLMSFLIGIVIAQQGSVQLRQFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFA 171 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+MK+ EE+DA+RT+G+ + L+ PR A+++ +PLL ++ AIIG + Sbjct: 172 AQLGTMKLTEEVDAMRTIGVSPMEALVLPRTLAVVVMMPLLGFYSSIVAIIGGGFLCAVS 231 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 DIP F R + +++ GLIKAP I + +G V ++ +G + T Sbjct: 232 LDIPPITFVQRLREVVPIHDLWVGLIKAPVFGVIIALAGCFQGMQVKANAEEVGLRTTAA 291 Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372 VVQ+I +VI+ID+ FA+F+ +G Sbjct: 292 VVQAIFLVIVIDAFFAVFFTWVG 314 >gi|161523583|ref|YP_001578595.1| hypothetical protein Bmul_0403 [Burkholderia multivorans ATCC 17616] gi|189351647|ref|YP_001947275.1| putative ABC transporter permease [Burkholderia multivorans ATCC 17616] gi|160341012|gb|ABX14098.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC 17616] gi|189335669|dbj|BAG44739.1| putative ABC transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 374 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 11/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R G W + ++ VV + DLS I +D +G + + + Sbjct: 19 TVRLTGQWTALALARNRGAVVRRAESVATGSVSEWDLSGIGRLDHVGGQALWRVWGRKLP 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + ++ R + + P+R L G + F Sbjct: 79 PGIALTATQ-----RTIFERIERLDSQREAPERIVRVGPVTRL----GLMLFAFAEHLHG 129 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + G VI + +Y G +P+ L++F+ G V++ A Sbjct: 130 GIAMFGRVILDALSVLRRPQTMP--WKETSANIYSAGAQALPITALVAFLIGIVLSYLSA 187 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R M Sbjct: 188 QQLQMFGANRYIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVM 247 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ LI PR+ AL +++PLL + N A+ G ++ I F + Sbjct: 248 GIPHGLRLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPI 307 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN++ GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI Sbjct: 308 ANLYIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAIL 367 Query: 368 YFAIGI 373 + +G+ Sbjct: 368 FQNVGL 373 >gi|53724609|ref|YP_101915.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|52428032|gb|AAU48625.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] Length = 355 Score = 227 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 11/365 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G W + ++ +V I + + DLS + +D +G + + + Sbjct: 1 MRLCGQWTALALARDRGNVARRIARLAKEAVGEWDLSGVERLDHVGGQALWRVWGRR--- 57 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 L ++ + + S + G+ + F Sbjct: 58 ------LPDGIALTDNQRVVFKRIERLDAGRESPEPVVRIDPVTRFGQGLFTFGEHLYGG 111 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +LG +I + + +Y G +P+ L++F+ G V++ A Sbjct: 112 IALLGGLIVDLLAVLRRPRTMP--WTEISANVYAAGTKALPITALVAFLIGIVLSYLSAQ 169 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG Sbjct: 170 QLQLFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMG 229 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + PR+ AL +++PLL + N A+ G ++ I F S +A Sbjct: 230 IPHGLRITLPRVLALGVAMPLLVMWTNVIALTGGALAAKFVLGIDLNFFVRSLPSVVPIA 289 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+F GL K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI + Sbjct: 290 NLFIGLGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILF 349 Query: 369 FAIGI 373 +G+ Sbjct: 350 QNVGL 354 >gi|294506238|ref|YP_003570296.1| ABC transporter permease [Salinibacter ruber M8] gi|294342566|emb|CBH23344.1| ABC transporter, permease [Salinibacter ruber M8] Length = 371 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 13/364 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62 + V G+W A V++ S + D S + + D+ + Sbjct: 9 DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68 Query: 63 --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +++ + T +E+L +L + L +G + Sbjct: 69 YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAED--------TALLARLGHWGLA 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +++ + LG + + G + + + + S +P+V +IS + G Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMR--WRTFGVALQESTASALPIVTVISLLVGL 178 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA L +FGA+ F L+S LRE+G L+TA+++ GR+G+A AE+GSM++NEE Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T G+ + L++PRI A++++LP+LT+ A+ I+G V D+ F + Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L++ G+ KA IG+ G G ++++G+ T+ VV I +++ Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358 Query: 361 DSLF 364 +++ Sbjct: 359 NAVI 362 >gi|220904331|ref|YP_002479643.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868630|gb|ACL48965.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 375 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 79/367 (21%), Positives = 149/367 (40%), Gaps = 7/367 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G+W + ++ + D+ ++ ++ + Sbjct: 16 LRVSVGGSWNIDRAWPPEARTALESLTDQSIREVRLESDNLGVWDSSLLVFLVQLVQTAN 75 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + S L + + S N +G+ + Sbjct: 76 ERKANLHTS-----LPDGLERLLKLAFAVPAKAGSDRKKEELNFVQRVGQVAIDLPPRVT 130 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G V G + + L+ M GV +P++ + S + G ++A G Sbjct: 131 DFLNFVGDVTLAVGRLFVGRTQMRPQ--DLLAAMQECGVQALPIISITSMLFGLILAFVG 188 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL+QFGA+I+ L+ I LR +G ++ V++AGR G+A A IG+M++NEE+DA+ T Sbjct: 189 AVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMAGRVGAAYAALIGTMQVNEEVDALAT 248 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V L+ PR+ AL +PLLT+ A+ ++G IV +I + + Sbjct: 249 LGIAPVDFLVLPRVVALTAMIPLLTLYADLMGVVGGYIVATTMLNINPMEYINATMQMVP 308 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++F GL I + +G G + ++G TT VV +I +I+ ++ + Sbjct: 309 YKHVFIGLAYGTVFGVIIAMTGCYQGMRCGRSAQAVGLATTTAVVHAIVGIIVATAVITV 368 Query: 367 FYFAIGI 373 + I Sbjct: 369 ICNVLDI 375 >gi|317484538|ref|ZP_07943446.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6] gi|316924199|gb|EFV45377.1| hypothetical protein HMPREF0179_00797 [Bilophila wadsworthia 3_1_6] Length = 388 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 84/377 (22%), Positives = 162/377 (42%), Gaps = 11/377 (2%) Query: 2 SENGITVFRFAGNWKSPEISE-----IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE 56 S G+ F+G WK + + + ++ S + A+ E D+ G Sbjct: 18 SSEGVLRVIFSGEWKRDLLGPNFFTERDEALRETERLLKEARSVELLGEALGEWDS-GVL 76 Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 ++ + K + +L I + + + +G Sbjct: 77 VVT---TRLVTLAKEHNIPLDDARLPEGIRNLTKLALAVPPNTAAQRKAQKTTFLERVGG 133 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + +C +G ++ + G + + + GV +P+V LIS Sbjct: 134 FTLAVPRMACDIFDFIGELVLSAGRLFRG--RSSCTPGNAWLAVQESGVDALPIVSLISL 191 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G ++A G QL FGAEI+ L+++ R +G ++T +++AGR+G++ A IG+M+ Sbjct: 192 LVGLILAFVGVIQLKMFGAEIYVSSLVAVSMTRIMGAIMTGIILAGRTGASYAAVIGTMQ 251 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 +NEEIDA+ T+G+ LI PR+ AL PLL + ++F I+G IV + Sbjct: 252 VNEEIDALTTLGVAPSDYLIMPRVLALTAMTPLLVLYSDFMGIMGGFIVGVGILGLDPME 311 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +++ + N++ G++ I I +G G ++ ++GK T+ VV SI Sbjct: 312 YYTFTQKGFNINNLWVGMVHGAVYGMLIAITGCYQGLRCGRNAEAVGKATTSAVVYSIVG 371 Query: 357 VIIIDSLFAIFYFAIGI 373 +++ ++ I + I Sbjct: 372 IVLSTAVLTILCNILNI 388 >gi|183220168|ref|YP_001838164.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910288|ref|YP_001961843.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774964|gb|ABZ93265.1| Membrane protein of an ABC transporter complex [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778590|gb|ABZ96888.1| ABC-type transport system, permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 374 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 92/343 (26%), Positives = 167/343 (48%), Gaps = 8/343 (2%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90 + + I+ + + E DT G + + + + ++ ++ T+ Sbjct: 40 LIGKNSPRNIIIFANQLKETDTSGISFLKLIRTECESRNIHFVLRELNDKFQYRLNITND 99 Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 K + S IGK + + + G + + K + Sbjct: 100 DSKKYNEQLAVSLRKS-----EQIGKLTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIR 154 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 R +GV+ P++ +I F+ G +++ Q A + +FGAEIF +L+ + RE Sbjct: 155 --WKDSFRVAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFVANLVGLSLFRE 212 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G L+TA +++GRSGS+ AE+G+MK++EEIDA+ TMGL V+ LI PR+ A +I PLL Sbjct: 213 LGPLMTAFILSGRSGSSFAAELGTMKVSEEIDALTTMGLPPVQFLIIPRLVASLIVTPLL 272 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 TI+ N +IG ++V+ + P F ++ + L++I GL+K+ F I + Sbjct: 273 TIVFNLFGLIGGAVVLVSFG-FPLITFVNQVNIAVGLSDILGGLLKSYFFGMIIASIGCY 331 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G + ++G+ T+ VV SI +V I+D +F++ +F + I Sbjct: 332 RGLKTASGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI 374 >gi|154173911|ref|YP_001408228.1| stas domain-containing protein [Campylobacter curvus 525.92] gi|112802195|gb|EAT99539.1| stas domain protein [Campylobacter curvus 525.92] Length = 368 Score = 226 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 14/372 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+T F+F G + + + + + S D + +D +++ Sbjct: 11 AASGVTSFKFIGKFTYKDAKILQNTLSRIAKAR---GSLRFDFLQLLHVDYA---VLILV 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 GK S + + PQ N +G+KI Sbjct: 65 KNAIKGKKAEFVTSDTKIKAMISLLDDESIDFSYIPPQNK------LNFFARLGEKICDG 118 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG + T + + + L + GV+ V +V L +F+ G V Sbjct: 119 FKNLLEFGSFLGEFLIKTIKIFVNPMSLR--LREFSNYIKDGGVNAVFIVSLTAFLIGVV 176 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G+ L+ FGA IF +++M +L LRE+ L+ A+++AGRS S+ A+IG+MK+ EEI Sbjct: 177 LAYLGSAMLANFGASIFIVEIMGMLTLREVAPLIAAIVVAGRSASSFTAQIGAMKLTEEI 236 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++TMG + L+ PRI A+++SLP++ +A+ +I+G ++ DI FA + SRF Sbjct: 237 DAMKTMGFEPFNFLVLPRIIAMVLSLPIIIFIADAISILGQMLICQGVLDISFADYLSRF 296 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L + G+IKAPF I I+ GF V ++ SLG+ T VV +I VI +D Sbjct: 297 KDMVELRHFAVGMIKAPFFGAIIAIIGCMRGFDVNSNAQSLGEMTTISVVNAIFWVIALD 356 Query: 362 SLFAIFYFAIGI 373 + FAI + + I Sbjct: 357 AFFAIIFMWLKI 368 >gi|83814459|ref|YP_444490.1| ABC transporter, permease [Salinibacter ruber DSM 13855] gi|83755853|gb|ABC43966.1| ABC transporter, permease [Salinibacter ruber DSM 13855] Length = 371 Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 13/364 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM- 62 + V G+W A V++ S + D S + + D+ + Sbjct: 9 DDTLVLAPVGDWTLDRPLPDARAVMVNAAPSSPVAAVAFDTSGLGDWDSSLVTFLFEAAE 68 Query: 63 --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + +++ + T +E+L +L + L +G + Sbjct: 69 YGRAHDLDVRIDTLPTSLERLVALSQAVPEADTTPEAAD--------TALLARLGHWGLA 120 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +++ + LG + + G + + + + S +P+V +IS + G Sbjct: 121 AYDEAHALVTFLGQAVRSVGAILTGRGRMR--WRTFGVALQESTASALPIVTVISLLVGL 178 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A GA L +FGA+ F L+S LRE+G L+TA+++ GR+G+A AE+GSM++NEE Sbjct: 179 IVAFLGAVVLQRFGADYFVSYLVSYGMLRELGALMTAIIMTGRTGAAFAAELGSMQVNEE 238 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T G+ + L++PRI A++++LP+LT+ A+ I+G V D+ F + Sbjct: 239 IDALETFGISPIDFLVTPRILAVVLALPMLTLYADALGIVGGMGVAVTMLDLTTTQFLTG 298 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L++ G+ KA IG+ G G ++++G+ T+ VV I +++ Sbjct: 299 LLEPVVLSDALVGIFKAVVYGGIIGLAGCMRGLQAGDDASAVGQATTSAVVTGILLIVFA 358 Query: 361 DSLF 364 +++ Sbjct: 359 NAII 362 >gi|254000132|ref|YP_003052195.1| hypothetical protein Msip34_2431 [Methylovorus sp. SIP3-4] gi|313202095|ref|YP_004040753.1| hypothetical protein MPQ_2372 [Methylovorus sp. MP688] gi|253986811|gb|ACT51668.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4] gi|312441411|gb|ADQ85517.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 371 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 11/369 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R G W + ++ A+ DL A ++DT GA +++ E Sbjct: 14 GRRRVRLLGQWSLRALDNDFAELKQALQPFFSDPFTQWDLLATEQLDTAGATILLNGWE- 72 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 V+ LF+ + + +F G+ ++KF Sbjct: 73 -GKLDARMQVTEEQRALFTTLQGLRVPARTGSQFDWAFP-------LVATGELVMKFAQH 124 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++GL++ F + +Y GV+ +PV L+ F+ G ++ Sbjct: 125 LTDFVQLIGLLLLEMLYLVRRPSAFP--WREFMANIYKSGVTALPVTGLLGFMIGVAMSY 182 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + QL FGA+IF ++++ + +RE+G +L A+++AGRSGSA+ A+IG M++ EEIDA+ Sbjct: 183 LMSSQLRTFGADIFIVNILGLSMIRELGPILMAILVAGRSGSAMTAQIGVMRVTEEIDAL 242 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG+ + ++ P++ L P L + +F + G ++ + F FF Sbjct: 243 TTMGVSRILRIVLPKVLGLTFVAPFLVLWTSFWGLAGGALSANTELGLSFRFFFDYLPMV 302 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 N+ L K + +VA G + ++ SL T+ VV +I+ VI++D+ F Sbjct: 303 VEPVNLTLSLFKGLLFGFVVTLVACHFGLRIMPNTESLSASTTSSVVTAITSVILLDAAF 362 Query: 365 AIFYFAIGI 373 AI IG+ Sbjct: 363 AILTSGIGV 371 >gi|224418846|ref|ZP_03656852.1| toluene ABC transporter permease [Helicobacter canadensis MIT 98-5491] Length = 375 Score = 225 bits (574), Expect = 9e-57, Method: Composition-based stats. Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 8/370 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +N I + + +G W ++ + + + ++L+ ++D G E++ ++ Sbjct: 13 DNDIYILKLSGLWD---YKIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERWI 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K V + + S + + P + F LH+ + I F Sbjct: 70 LALESKNI---VLENALKNHSKSQQIFQILATRKNPLKQDMVQDFIKLHWDSFQIIKGFF 126 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 DS G ++ + L + + + V + +V L F+ G VI Sbjct: 127 KDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFLIGIVI 184 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG+ QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AEIG M+ +EID Sbjct: 185 AYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEID 244 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG D + L+ PR+ AL + LPL+ +A+ ++GA +V I F RF Sbjct: 245 AMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQFVERFL 304 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + + G+ KAPF I V GF V + S+G T VV+SI +VI D+ Sbjct: 305 QVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLVIAFDA 364 Query: 363 LFAIFYFAIG 372 L ++ + +G Sbjct: 365 LCSVVFTEMG 374 >gi|311109431|ref|YP_003982284.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8] gi|310764120|gb|ADP19569.1| hypothetical protein AXYL_06276 [Achromobacter xylosoxidans A8] Length = 354 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 96/363 (26%), Positives = 175/363 (48%), Gaps = 11/363 (3%) Query: 12 AGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 AG+W ++E + A DL I +DTIGA LI H + Sbjct: 2 AGDWSVLALAEPGEVQRRREALACATDGGARWDLHGIGRLDTIGALLIWEAWG--HKLPE 59 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAH 130 S + +F+ ++ + + + + +G+ I + I++ + Sbjct: 60 RVRWSAGQQDVFNALAMNKGETPAAAPKRDPWSWPR------AVGEAIFQAIDNGRALLV 113 Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +LG ++ + G G + Q+Y G + + L+ F+ G V++ A QL Sbjct: 114 MLGQLVLDFGGMLRRPR--LGPWREISAQVYRTGAQALGITALVGFLIGVVLSYLSAQQL 171 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA+ MG+ Sbjct: 172 QMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDAMLVMGIS 231 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + LI PR+ AL +++PLL + + AI+G + + F +L N Sbjct: 232 HGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLQSLPDAISLTNY 291 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G++K I ++A G + ++ SLG+ TT VV SI+ VI++D+ +A+ + + Sbjct: 292 WIGILKGVTFGMLIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAFYAVIFSS 351 Query: 371 IGI 373 +GI Sbjct: 352 VGI 354 >gi|300114239|ref|YP_003760814.1| hypothetical protein Nwat_1606 [Nitrosococcus watsonii C-113] gi|299540176|gb|ADJ28493.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113] Length = 376 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 116/366 (31%), Positives = 192/366 (52%), Gaps = 6/366 (1%) Query: 9 FRFAGNWKSPEISEIADDVV--MAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G+W +E+ + A + + +A V+LS + +DT GA L++ + Sbjct: 14 LHVIGDWTLEYYAELQSRIDVFKAQAEKNNTLNATVELSGLNRLDTAGAVLLVELLGAER 73 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 ++ S +L+ R PQR + L G++I F Sbjct: 74 LAAFVKEGSGLTPARRALLDAVVRTMSMPLAPQRQAR-SPLVALLAGTGERIELFWRQQL 132 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 +GL++ + +++ L +L+ Q+ G++ + +V L++F+ GAV+A G Sbjct: 133 LLLGFIGLILGSLTATFWRPNRWR--LTALVAQIQQTGLNAIGIVALLTFLVGAVVAFLG 190 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A L FGA I+++DL++ LRE GVLL A+++AGR+ SA A+IGSMK NEEIDA+RT Sbjct: 191 ATVLQNFGATIYTVDLIAFSFLREFGVLLAAILLAGRTASAFTAQIGSMKANEEIDALRT 250 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL +L+ PR+ AL++SLP+LT + S ++G +V DI F + + Sbjct: 251 LGLSTAELLVLPRVLALLLSLPILTFIGMLSGMLGGGLVCLVVLDISALQFVTILQG-IS 309 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L + GL KAP A I + EGF V + S+G+ T+ VVQSI +VI++D++ A+ Sbjct: 310 LKHFLVGLSKAPIFAFFIAAIGCLEGFKVSGSAQSVGEHTTSSVVQSIFMVILLDAIAAL 369 Query: 367 FYFAIG 372 F+ +G Sbjct: 370 FFMEMG 375 >gi|253828165|ref|ZP_04871050.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491] gi|313142364|ref|ZP_07804557.1| ABC transporter [Helicobacter canadensis MIT 98-5491] gi|253511571|gb|EES90230.1| inner membrane protein yrbE [Helicobacter canadensis MIT 98-5491] gi|313131395|gb|EFR49012.1| ABC transporter [Helicobacter canadensis MIT 98-5491] Length = 371 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 8/370 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +N I + + +G W ++ + + + ++L+ ++D G E++ ++ Sbjct: 9 DNDIYILKLSGLWD---YKIPKSLLLRLDSIKLTNVKIKIELAENFDLDFCGGEILERWI 65 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 K V + + S + + P + F LH+ + I F Sbjct: 66 LALESKNI---VLENALKNHSKSQQIFQILATRKNPLKQDMVQDFIKLHWDSFQIIKGFF 122 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 DS G ++ + L + + + V + +V L F+ G VI Sbjct: 123 KDSLMAIGFFGEILYAWFSSLLQPKNIR--LKATLYCIQESLVKAIGIVALACFLIGIVI 180 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG+ QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AEIG M+ +EID Sbjct: 181 AYQGSIQLGQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEID 240 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG D + L+ PR+ AL + LPL+ +A+ ++GA +V I F RF Sbjct: 241 AMRVMGFDPITFLVLPRMLALCLVLPLVVFIADLFGLLGAMLVCQLQLGIGTEQFVERFL 300 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + + + G+ KAPF I V GF V + S+G T VV+SI +VI D+ Sbjct: 301 QVVDMRHFWVGIAKAPFFGLIISFVGCFHGFIVAKDTRSIGVHTTKSVVESIFLVIAFDA 360 Query: 363 LFAIFYFAIG 372 L ++ + +G Sbjct: 361 LCSVVFTEMG 370 >gi|254284160|ref|ZP_04959128.1| ABC transporter permease protein [gamma proteobacterium NOR51-B] gi|219680363|gb|EED36712.1| ABC transporter permease protein [gamma proteobacterium NOR51-B] Length = 377 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 94/373 (25%), Positives = 170/373 (45%), Gaps = 15/373 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G+W+S + ++ + VD + D+ L++ Sbjct: 18 DDCHHSLILKGSWESSAVLP---ELGALFQPDDTVTALRVDALEVARWDSRLISLLLKLH 74 Query: 63 E--KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G + QL +L + + +G ++ Sbjct: 75 RYCESRGISITTELPEGASQLLALAVAVPPAVESPSQSAGWLHSLNPLPYLERLGARVTD 134 Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F+N S G V++ + + + L+ Y G + +P++ L S + G Sbjct: 135 FLNFVGSLVSSTGRVVTG---------RGRVRVSDLLAFAYQTGPNALPIIGLTSLLVGM 185 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++ GA QL QFGA IF DL++I LRE+G L+TA++IAGR+G+A A++G+M++NEE Sbjct: 186 ILGYLGAVQLQQFGAGIFVADLVTIGVLREMGALMTAIIIAGRTGAAYAAQLGTMRVNEE 245 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DAI +G+ + L+ PR+ A+ + +PLL++ A I+G IV I ++++ Sbjct: 246 VDAIEILGISLMDFLVLPRVLAVTLMVPLLSLYAAIMGIVGGGIVS-ISLGITPLQYWTQ 304 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ L ++ GL KA IGI + G G S +GK TT VV ++ +I+ Sbjct: 305 AQTSLGLDHLLVGLSKALLFGALIGIAGCRAGMQSGRSSEGVGKATTTAVVVALVYLILA 364 Query: 361 DSLFAIFYFAIGI 373 D+ + +GI Sbjct: 365 DAAVNLLCQLLGI 377 >gi|223940090|ref|ZP_03631954.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223891275|gb|EEF57772.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 399 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 89/364 (24%), Positives = 174/364 (47%), Gaps = 8/364 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V R +G + + + A+ + V+++ +T D+ G + + Sbjct: 38 ENRFVLRLSGRLDADSTPFLWQRLQSAL-VVPPGATLEVNVAPLTYSDSAGFAFLYLLSK 96 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 ++ + + + ++ + ++ + L IG ++ Sbjct: 97 GCMTPQSQVSLNGLKPEYQKALQNYSMEDVQAYQGEQPVRQS----LMDEIGMAVIAKTL 152 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + +G VIS G + ++R G + +P+V LIS + G VIA Sbjct: 153 EVRQKVIFVGDVISGLGYVLTHPRWMRRN--EIVRIFETAGANALPIVSLISLLLGLVIA 210 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + A ++FGA+I+ +L+ ++ +RE+ ++TA+++AGRSGSA AE+G+MK+NEE++A Sbjct: 211 FEAAQPFARFGAKIYIANLIGLIMVRELSPVMTAILLAGRSGSAFAAELGTMKVNEELNA 270 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + T+GLD +R L+ RI A ++ PLLTI + + ++G +V+ P ++ + + S Sbjct: 271 LETIGLDPMRFLVVQRILASLLLTPLLTIYSMATGVLGGVLVM-LGLGFPLSIAWHQLQS 329 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + +I G++KA + A G ++G+ T VV I ++II DS+ Sbjct: 330 SVRINDIAFGILKAFVFGGIVAGTACLRGLETKSGPAAVGESTTRSVVSGILLIIIADSV 389 Query: 364 FAIF 367 FAI Sbjct: 390 FAIL 393 >gi|328954039|ref|YP_004371373.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328454363|gb|AEB10192.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 377 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 91/375 (24%), Positives = 168/375 (44%), Gaps = 12/375 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G+W AD V + S+ + + D + DT +M Sbjct: 12 SSADTLKVMISGDWLLGGELPAADRVQQRLEGSLGVRNLVFDTRELAHWDTGLLTFLMSL 71 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + + + G+ ++L L S + + + + +G + Sbjct: 72 ATFCSQQNIYLDRDGLPPGAKRLLELASAV-------PEKKDAHKVEERLSFLAFLGNET 124 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 V F + +G + +++ L LI Q VGV +P+V LI F+ Sbjct: 125 VNFFQSAGELLEFIGDAVIAVLRLIRGQAQYRRADLGLIMQA--VGVQALPIVSLICFLV 182 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G ++A GA QL FGA+I+ DL+ I +R + ++T +++AGR+G A A++G+M++N Sbjct: 183 GLILAFIGAIQLKLFGAQIYVADLVGIAMVRLMAAIMTGIVMAGRTGGAFAAQLGTMQVN 242 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 +EIDA++T+G+ + L+ PR+ AL + +PLL + AN I+G V I F ++ Sbjct: 243 QEIDALKTLGISPMEFLVLPRMLALALMMPLLCLYANVMGILGGMAVGVGMLGIGFIQYY 302 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + L N+ GL + + G G ++++G T+ VV +I +I Sbjct: 303 NQTAAAVGLWNLGIGLFSGTVFGVIVALAGCMRGMQCGRSASAVGDAATSAVVTAIVGII 362 Query: 359 IIDSLFAIFYFAIGI 373 + + I +GI Sbjct: 363 VSTAAITILCNFLGI 377 >gi|145589257|ref|YP_001155854.1| hypothetical protein Pnuc_1074 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047663|gb|ABP34290.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 393 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 8/367 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + V+ G W ++ A + + + + S D++ + +D G I+ E Sbjct: 34 VNVYTLGGVWTQVRAAQDA-WLHSSSTVNSAAKSLTCDVTKVETLDGAGIAFIIALQEAQ 92 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + E+ L+ P + +IG I DS Sbjct: 93 TVAGGNFELIGLAERYQPLLKEFDPISNLFPAP----VAKPQRGFVTNIGMGTANLIKDS 148 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 LG + S+ + + + G++ +P++ L++F+ G +++ Q Sbjct: 149 KGLITFLGHLGSDLVWSVRNLKHVR--WGDFVNAAVEAGINALPIIGLVAFLIGVILSFQ 206 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A + QFGA F L ++ +RE+G L+TA+++AGRS +A AEIG+M +N E+DA+ Sbjct: 207 AAIGMKQFGAVSFVGPLAALGIVREMGPLITAILLAGRSSAAFAAEIGTMTVNSEVDALV 266 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 + GL +R L+ PR+ A I+ P+LT+ A+ +I + + Y IPF F++ S Sbjct: 267 SGGLSPMRFLVVPRVLAGILVAPILTLFADIVSIFASML-TMLIYGIPFINFYNGMLSAV 325 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ +GLIKA + V G G + ++G T VV SI +++I+D +FA Sbjct: 326 DVEDVTSGLIKATLFGVVVSAVGCLRGMQTGNGAAAVGISATRAVVSSIVMIVIVDGIFA 385 Query: 366 IFYFAIG 372 + G Sbjct: 386 FISYKTG 392 >gi|73539807|ref|YP_294327.1| hypothetical protein Reut_A0101 [Ralstonia eutropha JMP134] gi|72117220|gb|AAZ59483.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134] Length = 357 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 14/368 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKS---IQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G+W + ++ M D A L+ + ++D IG +L+ Sbjct: 1 MQLCGDWTALGLAGCHQARAMRSRLHELCQTPDDAHWSLAGVDKLDHIGGQLLWQAW--- 57 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 G + N G ++ F + Sbjct: 58 ------DGKLPQRLDASEGQRRVFERIADLHADGWRKHIVERFNPITLFGASVLSFCAQA 111 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +LG + + F +G + +Y +G + + L+ F+ G V++ Sbjct: 112 ANGVSMLGQLTFDLIRFARMPQ--RGPWREISANIYNIGYKALGITALVGFLIGIVLSYL 169 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL FGA F ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+R Sbjct: 170 SANQLRTFGASTFIVNILGMAVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAMR 229 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ LI PR+ AL + +PLL + A+ G I I F Sbjct: 230 VMGISHGFRLIMPRVIALAVCMPLLVAWTDVLALAGGIIAARMQLGISPTFFLRALPDAV 289 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +AN++ GL K IG+ A G + ++ SLG+ T VV SI+IVI+ D++FA Sbjct: 290 PVANLWLGLGKGVAFGILIGLAACHFGLRIKPNTQSLGEGTTASVVVSITIVIVADAIFA 349 Query: 366 IFYFAIGI 373 + + +G+ Sbjct: 350 VMFKDVGL 357 >gi|218961389|ref|YP_001741164.1| transporter, putative (modular protein) [Candidatus Cloacamonas acidaminovorans] gi|167730046|emb|CAO80958.1| transporter, putative (modular protein) [Candidatus Cloacamonas acidaminovorans] Length = 358 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 97/364 (26%), Positives = 170/364 (46%), Gaps = 16/364 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ + + E +V + + +DLS I +D+ G + + Sbjct: 9 ILYLEGSLNAETVPETFIEVNSLLKHQSPN---TIDLSNINVLDSAGVAFLDELNTRLSA 65 Query: 68 KIKL--QGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + L QG + I+++ S K ++ IG +V + Sbjct: 66 EGILLFQGATPEIQEVIDSFSSLKIKVPAPERK---------MGFFEKIGDSLVLAGQNF 116 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + + V + S Q +G +P++ L+SF+ G +++ Q Sbjct: 117 YNVMLLASEVFY--WAVIGIFSRKGQRKGSFTIQCSLLGSQALPILSLLSFIVGFILSLQ 174 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + QL+ FGA +F DLM+ +REI L+TA+++AGRSGSAI +EI +M++ EEIDA++ Sbjct: 175 ASVQLANFGANVFIADLMAFAMVREIAPLITAIIVAGRSGSAIASEIATMQVTEEIDALK 234 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 TM L VR ++ P+ A+ + +P+L + + + IG ++ Y D+ F R + Sbjct: 235 TMALSPVRYVVVPKFHAITVVMPILVMFSILVSEIGGGLIAIDYLDLSVYTFVQRSINVL 294 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 TL ++ T K+ A I I+ GF V + +GK T+ VV SI VII D++F+ Sbjct: 295 TLKDLVTSFGKSVIFAWTIVIIGAYCGFQVKGGAEGVGKATTSSVVASIFAVIIWDAIFS 354 Query: 366 IFYF 369 + Y Sbjct: 355 LLYL 358 >gi|330818440|ref|YP_004362145.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3] gi|327370833|gb|AEA62189.1| hypothetical protein bgla_1g35860 [Burkholderia gladioli BSR3] Length = 395 Score = 222 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 99/391 (25%), Positives = 180/391 (46%), Gaps = 32/391 (8%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS---------------------AIV 42 + R +G W + ++ VV ++K + + + Sbjct: 15 GDGKIVRLSGQWTALALARDRGVVVRRVHKLARGPARAGGRMPALGAGSAAAQGGPVSRW 74 Query: 43 DLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 DLSAI +D +G + + H + ++ + +F I + + + R Sbjct: 75 DLSAIDRLDHVGGQALWRVWG--HRLPEGLTLTDNQRTIFERIQRLDEAREEPEPVIR-- 130 Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + +G +++F + G VI + G + +Y Sbjct: 131 -----HDPVTRLGLALMQFGEHLFGGIAMFGRVILDLGSIARRPKTMP--WTEISANVYN 183 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G +P+ L++F+ G V++ A QL QFGA + ++++ + +RE+G +L A+++AG Sbjct: 184 AGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLAAILVAG 243 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSAI A+IG M++ EE+DA+R MG+ ++ PR+ AL +++PLL + N A+ G Sbjct: 244 RSGSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGG 303 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++ I F +AN++ GL K I +V GF + +S SL Sbjct: 304 ALAAKLALGIDVNFFIRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSL 363 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 364 GEGTTTSVVTSITVVILADAVFAILFQNVGL 394 >gi|329851286|ref|ZP_08266043.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19] gi|328840132|gb|EGF89704.1| hypothetical protein ABI_41270 [Asticcacaulis biprosthecum C19] Length = 363 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 9/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R GNW I +++ + A+ VD S I +DT GA L+ + + Sbjct: 2 LRPKGNWIVTRIEGLSERLRQALKSY---QQITVDGSQIEALDTAGAYLLRTAVGD-RLQ 57 Query: 69 IKLQGVSTHIEQLFSLISFTHRKK---IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ + +L+ ++ + + + F +GK +F Sbjct: 58 GEVFAGQDNFARLYGIVGNHAAPISNYAQENPEPPKMWLHPFYFGLVKLGKLAERFKTGF 117 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +QA +G +I+ A + +L+ M G+ +P+V++ SF GAV+ Sbjct: 118 IAQAVFMGHIIAQLMISIAKPGSMR--WAALVNVMQRAGIEAIPIVLMTSFFIGAVLGFI 175 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G QL+QFG+ IF++D++++ LRE L+TAV++AGRS SA AE+G+MK+N+EIDA+R Sbjct: 176 GVLQLNQFGSGIFAVDMVAMFALREFAPLVTAVLLAGRSASAFAAEVGAMKMNQEIDAMR 235 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+D LI PR+ L++ +T L+ + G + IW +VF R Sbjct: 236 VMGIDPYEALILPRLIGLVLMSTFITFLSTLGMMFGGMLAIWSALGAGPSVFLQRVQDYV 295 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 N F G+++ PF A I IV +G V SLG++VTT VVQSI +V ++D+LFA Sbjct: 296 PFYNFFVGIVRPPFFAATIAIVGCWQGMQVKDDVLSLGRQVTTAVVQSIFLVFMLDALFA 355 Query: 366 IFYFA 370 I + Sbjct: 356 ILFNG 360 >gi|257092687|ref|YP_003166328.1| hypothetical protein CAP2UW1_1065 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045211|gb|ACV34399.1| protein of unknown function DUF140 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 370 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 97/367 (26%), Positives = 172/367 (46%), Gaps = 13/367 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + AG+W + + + + + S A DL +I +D+ A ++ + Sbjct: 15 LQVQLAGDWTLATLPQPISRFEARL-RELASREAAWDLLSIARLDSAAAVVLWRSWGRRW 73 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +S L + + + G+ + +++ Sbjct: 74 PASLA--LSGEHRLLLERVEAIPADLPARPSERLGWLLVP--------GRLALAAVDNLA 123 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 ++G ++ + G CA +Y G +PV LI F+ G V++ Sbjct: 124 GMVALVGQMVLDVGHLCAHPRDIP--WREFSANLYKSGAQALPVTALIGFLIGIVLSYLS 181 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A QL FGA++F ++L+ I +RE+G +L AV++AGRSGSA+ A++G M++ EEIDA+ T Sbjct: 182 ALQLKTFGADVFIVNLLGISIVRELGPVLVAVLVAGRSGSAMTAQLGVMRVTEEIDALAT 241 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG+ L+ P+I AL +++PLL + + + I+G I D+ + F Sbjct: 242 MGVSRSLRLVLPKIIALAVAMPLLVVWCSAAGIVGGMIAARLQMDLSYGFFIDTLPRVVP 301 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +AN++ G+ K IG+VA G V ++ SL + TT VV SI++ I++D++FAI Sbjct: 302 VANLWIGMSKGLVFGMLIGLVACHFGLRVKPNTESLSSQTTTSVVTSITVAILVDAVFAI 361 Query: 367 FYFAIGI 373 + GI Sbjct: 362 MTRSFGI 368 >gi|325527206|gb|EGD04595.1| putative ABC transporter permease [Burkholderia sp. TJI49] Length = 351 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 97/361 (26%), Positives = 166/361 (45%), Gaps = 11/361 (3%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G W + ++ VV + DLS I +D +G + + + Sbjct: 1 GQWTALALARNRGAVVRRAESVATGRVSEWDLSGIGRLDHVGGQALWRVWGRKLPAGIAL 60 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHIL 132 + ++ R + + P+R + L G + F + Sbjct: 61 TATQ-----RTIFERIERLDSQREAPERIVRVDPVTRL----GLMLFAFAEHLQGGIAMF 111 Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G VI + +Y G +P+ L++F+ G V++ A QL Sbjct: 112 GRVILDALSVLRRPQTMP--WKETSANIYSAGTQALPITALVAFLIGIVLSYLSAQQLQM 169 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 170 FGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHG 229 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 LI PR+ AL I++PLL + N A+ G ++ I F +AN++ Sbjct: 230 LRLILPRVLALGIAMPLLVMWTNIIALTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYI 289 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI + +G Sbjct: 290 GIGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVG 349 Query: 373 I 373 + Sbjct: 350 L 350 >gi|209521691|ref|ZP_03270381.1| protein of unknown function DUF140 [Burkholderia sp. H160] gi|209497882|gb|EDZ98047.1| protein of unknown function DUF140 [Burkholderia sp. H160] Length = 388 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 175/369 (47%), Gaps = 14/369 (3%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + R +G W + ++ + + + + DLS + +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRETGHVIPLLRALTGAQGIGEWDLSGVDRMDHVGGQALWRVWGR 90 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 ++ +F I+ + + S + +G I F++ Sbjct: 91 KMPPG--TALTDTQRDIFERIALLDTVRESAEPV-------SRIDPFTRLGLGIFSFLDH 141 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 142 MQGGVTMLGRVVLDLLAIARKPKLTP--WTEISANIYNAGARALPITALVAFLIGIVLSY 199 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FGA F ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+ Sbjct: 200 LSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAM 259 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG+ LI PR+ AL +++PLL + N ++ G ++ I + F + S Sbjct: 260 RVMGIPHGLRLILPRVVALAVAMPLLVMWTNVISLTGGALAAKLVLGIEMSFFARQLPSV 319 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D++F Sbjct: 320 VPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAVF 379 Query: 365 AIFYFAIGI 373 AI + +G+ Sbjct: 380 AILFQNVGL 388 >gi|85860995|ref|YP_463197.1| ABC transporter permease [Syntrophus aciditrophicus SB] gi|85724086|gb|ABC79029.1| ABC transporter permease protein [Syntrophus aciditrophicus SB] Length = 381 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 78/369 (21%), Positives = 160/369 (43%), Gaps = 6/369 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 V R +G+W + A+++ A+++ I + I D+ + D+ + + Sbjct: 19 DALVLRLSGDWMANGRLPDAEEIRQALSQQIPAPRIIFDVVGLGAWDSGLLIFLAKVFDI 78 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 G S + L+ ++ S + + + F Sbjct: 79 CRGNGISVDSSGLPPGVCRLLELAS----PEKQRSGVTREKSPPSFLVRVADATLDFGRG 134 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + F+ LI + G +P+V LIS + G ++A Sbjct: 135 FKDMLAFVGDATLSVLRMLRGKPGFRR--SDLILILQETGAQALPIVSLISLLVGMILAF 192 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FG +I+ D++ I +R +G ++T +++AGR+G+A A++G M++NEEIDA+ Sbjct: 193 VAAIQLRMFGVQIYVADVVGIAMVRVMGAIMTGIIMAGRTGAAFAAQLGMMQVNEEIDAL 252 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+ V L+ PR+ AL++ +PLL I ++ ++G IV D+ ++ + Sbjct: 253 EVLGVSPVDFLVLPRLLALMLMMPLLCIYSDLMGVVGGLIVGVGMLDLGVIEYYHETVNA 312 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +L + GL + + + G +++++G T+ VV I +++ ++ Sbjct: 313 VSLTYFWIGLFHSFVFGVLVALAGCLRGLQCERNASAVGFAATSAVVTGIVSIVVATAII 372 Query: 365 AIFYFAIGI 373 + +GI Sbjct: 373 TLLCQVLGI 381 >gi|114328116|ref|YP_745273.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114316290|gb|ABI62350.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 392 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 166/372 (44%), Gaps = 10/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE + +G W + + ++ ++D+SA+ D+ + Sbjct: 31 SEGMVATLSLSGEWTVASGGLNTRPINAF---PVGTERLLIDVSALQRWDSALISFLWSL 87 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + ST L++ + F IG + Sbjct: 88 EQRCNTSGITLDNSTLPHSARGLLALLPEHPHPSAPAPAKHFAP-----VQAIGASTLSM 142 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + + + + G + + L+R + G S + +V +++F+ G++ Sbjct: 143 LTECGTVTELGVETLRGAGATLFGGHGMR--WRDLLRDISDAGPSALLIVGIVNFLMGSI 200 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA QL +F A+I+ +L+ + +RE+ ++TA+++AGR+G A A I +M NEEI Sbjct: 201 LAFVGAVQLRKFAADIYVANLVGLASVREMSAVMTAIIMAGRTGGAYAARIATMTGNEEI 260 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R G+ R L+ P I AL++++P+L + A +++G IV D+ A F++ Sbjct: 261 DALRVFGIPVSRYLLLPSIAALVLTMPILYLYACLISLVGGYIVSQGMLDVTMAGFWNHL 320 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + + G +K A IG+V+ + G G + +G T VV I VI +D Sbjct: 321 FGSVHIDQFVFGFVKTITFAMLIGLVSCRIGLKAGRSAADVGVAATRAVVSGIVGVIALD 380 Query: 362 SLFAIFYFAIGI 373 S+FA+ IGI Sbjct: 381 SMFAVLATIIGI 392 >gi|78357028|ref|YP_388477.1| ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219433|gb|ABB38782.1| ABC transporter permease protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 373 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 90/369 (24%), Positives = 164/369 (44%), Gaps = 7/369 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V F G W + + + + + + + +T D+ +E Sbjct: 12 GRCVIVFQGRWTLHDTVPSVGKLALRLESDCRGGAVSFSCAGLTAWDSRFLTFCRSVLET 71 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 G+ S + + L+S + + + L +G+ + Sbjct: 72 LEGRGIAYDTSGLPDGVLRLLSLAAQV-----PEREGAAVSRKSPLSARMGEALHAAFAG 126 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + S +G V + C F+ + + G +P+V LIS + G + A Sbjct: 127 TISVMEFIGDVTLSVLRMCIGRAVFR--WSDTFALLRFCGAQSLPIVSLISMLAGLIFAF 184 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 GA QL FGAEI+ L+ I LR +G ++TA++++GR G+A AE+G+M++NEEIDA Sbjct: 185 VGAVQLKMFGAEIYVASLVGIAMLRVMGAVMTAIIVSGRVGAAFAAELGTMQVNEEIDAF 244 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T G+ + L+ PR+ AL++ +PLL + AN I+G + V W DI +F+ T Sbjct: 245 STFGISPLDFLVLPRMLALVLMMPLLCVYANLMGIVGGAAVGWLMLDINLHQYFNMTWQT 304 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +L + G+ + + + + G G ++++GK T+ VV SI +++ ++ Sbjct: 305 VSLTHFGVGIAHSVVFGFVVAVCSCYMGIHCGRSASAVGKATTSAVVSSIVSIVVATAVI 364 Query: 365 AIFYFAIGI 373 +GI Sbjct: 365 TFLCNILGI 373 >gi|327399071|ref|YP_004339940.1| hypothetical protein Hipma_0911 [Hippea maritima DSM 10411] gi|327181700|gb|AEA33881.1| protein of unknown function DUF140 [Hippea maritima DSM 10411] Length = 349 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 107/365 (29%), Positives = 184/365 (50%), Gaps = 25/365 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G +S++ + AI+D+ +++DT + K Sbjct: 10 LLVSGELTFNNLSKLITKINE-------CKPAIIDVRGASKLDTSSLVYLASLNIKLLLN 62 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 Q SL++ + + +K + S + Y +G V+ + + Sbjct: 63 KNDQ----------SLLNIVLQHIPEKKKKKDS------RGFLYSLGYAFVERLKELYVF 106 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG V F + +F+ L S ++ + +G + +P++ ISF+ GAVIA G+ Sbjct: 107 MSFLGEVFVGFIGFILNPKRFR--LKSTLKDVELMGFNAIPILTTISFLIGAVIAYHGSV 164 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +L QFGA IF +DL+SI LRE+G L+ A+++AGRS S+ A+IG MK+ EE+D I+TMG Sbjct: 165 RLKQFGANIFVVDLVSISVLRELGPLIVAILLAGRSSSSYTAQIGIMKVTEEVDVIKTMG 224 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ IL+ P+I ++++ +PLL +LA+ ++G +V +I F R H + Sbjct: 225 VNPYDILVFPKIVSMLVCVPLLIVLADVMGVLGGMVVAHLSLNITVRDFILRLHQAIGIK 284 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G++KAP A I + +GF + S+GK VT VV SI VII D++F++ + Sbjct: 285 TFVSGILKAPAFAFLIATIGAFKGFQTKKNVESIGKSVTVSVVDSIFGVIIADAIFSVLF 344 Query: 369 FAIGI 373 +GI Sbjct: 345 RWMGI 349 >gi|293602529|ref|ZP_06684975.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gi|292819291|gb|EFF78326.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 383 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 96/370 (25%), Positives = 176/370 (47%), Gaps = 11/370 (2%) Query: 5 GITVFRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V AG+W +++ + + A DL I+ +DTIGA LI Sbjct: 24 DGKVCHVAGDWSVLALAQAGEVERRRAAMAQAAEQGMRWDLHGISRLDTIGALLIWQAWG 83 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + S + +F+ ++ + +F +G I++ Sbjct: 84 EKLP--ERVRWSAGQQDVFNALAMNKGEVQTAPPKPETF------GWVRGLGGAILQAAE 135 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + +LG ++ + G G + Q+Y G + + L+ F+ G V++ Sbjct: 136 NGRALLIMLGQLMLDLGGMLRRPR--LGPWREISAQVYRTGAQALGITALVGFLIGVVLS 193 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL GA+ F + L+ + +RE+G +L A+++AGRSGSAI A+IG M++ +E+DA Sbjct: 194 YLSAQQLQMIGADRFIVRLLGVSIVRELGPVLAAILVAGRSGSAITAQIGVMRVTQELDA 253 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+ + LI PR+ AL +++PLL + + AI+G + + F + Sbjct: 254 MLVMGISHGQRLILPRVVALAVTMPLLVLWTDAMAILGGMLAAQMQLGVSAQWFLTSLPD 313 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +L N + G+ K I ++A G + ++ SLG+ TT VV SI+ VI++D+L Sbjct: 314 AISLTNYWIGIFKGVTFGILIALIACHFGLRIQPNTESLGRGTTTSVVTSITGVILLDAL 373 Query: 364 FAIFYFAIGI 373 +AI + ++G+ Sbjct: 374 YAIIFSSVGV 383 >gi|91792032|ref|YP_561683.1| hypothetical protein Sden_0670 [Shewanella denitrificans OS217] gi|91714034|gb|ABE53960.1| protein of unknown function DUF140 [Shewanella denitrificans OS217] Length = 369 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 18/370 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 G+W+ + AD + AI S S I+D A+ D+ A ++ + E Sbjct: 15 CHIALRGDWQLGH-ALDADSICAAIPSQ--SRSVIIDTQALGLWDSSLAVALLQLSRWCE 71 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + L ++QL L + + Q + + G+ + Sbjct: 72 QAELPLSLDACPPSLQQLLKLATEVP--SNQTQSQAQLSLKQKLRANLTEQGQGVYD--- 126 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 LG + + K + +I + G G+ +V LIS + G ++A Sbjct: 127 ----SLLFLGNSVLAISHWLRGKAKTRA--SDIIFFIEQAGPQGLAIVTLISLLVGMILA 180 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G+ QL Q GA+++ DL++I +RE+G L+TAV++AGR+G+A A++G+M+ NEE+DA Sbjct: 181 YLGSVQLRQLGAQVYVADLVAIGMVREMGPLMTAVIMAGRTGAAYAAQLGTMQANEEVDA 240 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+ + L+ PR+ AL+ +PL+ I ++ IIG IV + + + Sbjct: 241 LSVMGISAMEFLVVPRLVALVFIMPLMCIYSDAIGIIGGGIVANGMG-VSATQYLLQAQV 299 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I TGL+K+ I I + G A G +SN++G T VV++I +++ D+ Sbjct: 300 AVDWLDITTGLVKSLIFGILIAIAGCQAGLACGRNSNAVGVATTKAVVKAIVFLVVSDAA 359 Query: 364 FAIFYFAIGI 373 I Y +GI Sbjct: 360 LNILYDKLGI 369 >gi|74316265|ref|YP_314005.1| ABC transporter permease [Thiobacillus denitrificans ATCC 25259] gi|74055760|gb|AAZ96200.1| ABC transport system permease protein [Thiobacillus denitrificans ATCC 25259] Length = 364 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 92/343 (26%), Positives = 168/343 (48%), Gaps = 7/343 (2%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHR 90 + ++D + +T +DT GA L++ + + + S++ + Sbjct: 29 LPDLSGKRVRVIDGAGVTHLDTNGAWLLLAAAQP-KADAPAPDLRDFQPRHLSMLRLVAQ 87 Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 + + + G+ + + +G + ++ Sbjct: 88 HRAATPP----LPAPRQEGVLALTGRGALTVWSHLVGLLDFVGRLALELAGLVGQPGLWR 143 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 L Q+ V V +P+V + F+ G V A Q QFGA IF +D + + LRE Sbjct: 144 --WRELAAQVRDVFVGAIPIVSGMMFLLGVVFAYLLGDQARQFGANIFVVDGLLLAVLRE 201 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 I ++ AV++AGR+G+AI A++G+MK+ EEIDAI T+GL + +L+ PR+ ALI+++PLL Sbjct: 202 ISPVIVAVLVAGRTGAAITAQLGTMKVAEEIDAIATLGLSPLAVLVIPRVLALIVAMPLL 261 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 + + + ++G +V+ + I +F R + L + GL KAP A I +++ + Sbjct: 262 VFIGDIAGLVGGMLVVQQQLAISPPIFLDRLYDVILLKTLMVGLGKAPVFALFIALISCR 321 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 G AV + S+G T+ VVQS+ VII++++FA+ + +GI Sbjct: 322 MGLAVSRDARSVGVNTTSTVVQSLVAVIILNAVFAVAFVRLGI 364 >gi|119897982|ref|YP_933195.1| hypothetical protein azo1691 [Azoarcus sp. BH72] gi|119670395|emb|CAL94308.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 365 Score = 217 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 168/366 (45%), Gaps = 12/366 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G+W +S V A+ A + + +D+ GA L+ + Sbjct: 10 VCELSGDWTLRALSPHIAGVRAALAAVPAD--AAWSCAGVLRLDSFGAALLWQAWGRNW- 66 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 IE +L R + P + +G +V F Sbjct: 67 -------PATIEISAALREVVARVAAAAEHPPAPPRPFTTTEAITLLGAGLVGFRRHLAD 119 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG ++ + ++ + +Y V V +PV L+ F+ G V++ A Sbjct: 120 LTVLLGQLVLDVVHLLRHPREWPVL--EISANLYKVAVRAMPVTALVGFLIGVVLSYLSA 177 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA+IF ++++ + +RE+G +L +V++AGRSGSA+ A++G M++ EEIDA+ M Sbjct: 178 LQLRAFGADIFIVNILGLGIIRELGPVLVSVLVAGRSGSAMTAQLGVMRVTEEIDALAAM 237 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ L+ P++ AL +++PLL + + A+ G + W + F F L Sbjct: 238 GISASLRLVLPKVLALTLAMPLLVLWTSAVALFGGMVSAWMELGMSFGFFLETLPRVVPL 297 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 AN+F GL K I +VA G V ++ SL T VV +I++VI++D+LFAI Sbjct: 298 ANVFVGLTKGLVFGLLISLVACHFGLRVKPNTESLSANTTASVVTAITVVILVDALFAIA 357 Query: 368 YFAIGI 373 IG+ Sbjct: 358 TRRIGV 363 >gi|94987489|ref|YP_595422.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731738|emb|CAJ55101.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 386 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 86/368 (23%), Positives = 155/368 (42%), Gaps = 7/368 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 F+GNW+ + A +N + +++ D+ I + K Sbjct: 26 TLEISFSGNWQLNQPIPDATRFASQLN-YPVVKELYLKTNSLGIWDSSLIAFIKTLINKA 84 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + + +LI + + + + + +IG + + Sbjct: 85 QSQQITINDHELPAGIKNLIQLAFQ----TPPNKEAHKKTTQISFLEYIGDITLSLPSTI 140 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 LG + +T ++ R M GV +P+V LIS + G ++A Sbjct: 141 QKILTFLGEMTLSTKRLITGHSD--CSSTNIWRCMQQAGVEALPIVSLISLLVGLILAFV 198 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 G QL FGAEI+ L++I R +G ++T V+++GR+G++ A IG+M +NEEIDA+ Sbjct: 199 GVIQLRMFGAEIYVSSLVAIGMTRIMGAVMTGVILSGRTGASYAATIGTMNVNEEIDALM 258 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T G+ L+ PR+ AL PLL + ++F ++G IV I + + Sbjct: 259 TFGIRPSDFLVMPRLIALTTMTPLLVVYSDFMGMLGGFIVGVGVLGIEPLEYINFTQKGF 318 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L N++ G+I I I +G G +++++G T+ VV SI ++I + Sbjct: 319 ALKNLWVGIIHGIAFGIIIAITGCYQGLNSGKNASAVGLATTSAVVYSIVGIVIATACLT 378 Query: 366 IFYFAIGI 373 I + I Sbjct: 379 IIFNIFNI 386 >gi|114563133|ref|YP_750646.1| hypothetical protein Sfri_1962 [Shewanella frigidimarina NCIMB 400] gi|114334426|gb|ABI71808.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 370 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 88/370 (23%), Positives = 174/370 (47%), Gaps = 11/370 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + AG+W+ + + + D+ + + QS + I + ++ D+ A ++ Sbjct: 12 DDNCLLNLAGDWQLGQ-APLGADICAELPSNCQSITLI--TTELSHWDSSLAIALLQLSR 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + + T + +P + L + + ++K Sbjct: 69 --WCEQQKISLDTQQTPQGLQQLLQLATDVPVYQPTND---GAIGGLWPTLRRSLIKQGL 123 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +G G + + + +I + G G+ +V LIS + G ++A Sbjct: 124 QVHDGLVFVGDCTLVLGRWLGGKARTRR--SDIIFFIEQAGPKGLAIVTLISLLVGMILA 181 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G+ QL Q GA+++ +L++I +RE+G L+T V++AGR+G+A A++G+M++NEEIDA Sbjct: 182 YLGSVQLRQLGAQVYVANLVAIGMVREMGALMTGVIMAGRTGAAYAAQLGTMQVNEEIDA 241 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ + L+ PR+ ALI +PL+ I ++ ++G ++V + + + + Sbjct: 242 LRVMGIPTMEFLVLPRLLALIFIMPLMCIYSDVIGMLGGALVANGMG-VSYTQYILQTQV 300 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I TGLIK+ I I + G G SN++G T VV++I +++ D+ Sbjct: 301 AIDWVDISTGLIKSLIFGFLIAIAGCQAGLLCGRDSNAVGLATTHAVVKAIVFLVVADAA 360 Query: 364 FAIFYFAIGI 373 I Y +GI Sbjct: 361 LNILYDKLGI 370 >gi|148264681|ref|YP_001231387.1| hypothetical protein Gura_2637 [Geobacter uraniireducens Rf4] gi|146398181|gb|ABQ26814.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 401 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 74/372 (19%), Positives = 158/372 (42%), Gaps = 12/372 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--- 61 + AG+W+ D V+ + + + + + D+ + Sbjct: 39 DGALLTLAGDWRLGSAIPSPDGVIAGLGAAEKGQRLAFETGNLQGWDSGLLVFLAKLFDI 98 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + + G+ + +L L S ++ + + + + Sbjct: 99 CRRNGISVDESGLPAGVRKLIDLASPEKQRSGVTHGGEHP-------SFLVWVADTALAQ 151 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +G + F+ LI + G +P+V LIS + G + Sbjct: 152 VKGAKEVLAFIGEATLAFVKMLRGKADFRRM--DLIVTIQETGAQALPIVTLISLLVGMI 209 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + QL FGA+I+ D++ I +R +G ++T ++++GR+G+A A++G+M++NEEI Sbjct: 210 LAFIASIQLKMFGAQIYVADVVGIGIVRVMGAIMTGIIMSGRTGAAFAAQLGTMQVNEEI 269 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+G V L+ PR+ AL++ +PLL + ++ ++G IV D+ F + + Sbjct: 270 DALETLGFSPVEFLVLPRMLALMLMMPLLCVYSDLMGVLGGMIVGVGMLDLGFMEYVHQS 329 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 S L + GL + + + G ++++G T+ VV I +++ Sbjct: 330 RSALNLTHFLVGLFHSFVFGILVAVAGCLRGLQCERSASAVGYAATSAVVTGIVCIVVAT 389 Query: 362 SLFAIFYFAIGI 373 ++ + +GI Sbjct: 390 AIITLSCQVLGI 401 >gi|189426230|ref|YP_001953407.1| hypothetical protein Glov_3181 [Geobacter lovleyi SZ] gi|189422489|gb|ACD96887.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 261 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 7/265 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N IG++ + + + LG S + G + +++Q+ ++G Sbjct: 4 RQMTNFLRAIGRRTIAQVQE-------LGNCGQFLVYALYSILRRPGRPVHILKQVSFIG 56 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + V++L + TG V+ QG + L++FG+E +++ +RE+G +L+A+M+ GR+ Sbjct: 57 AKSLFVIVLTAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLSALMVTGRA 116 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GSAI AEIG M+I+E+IDA+ TM LD + LISP+ A +IS+PLL + + I G + Sbjct: 117 GSAITAEIGIMRISEQIDALETMALDPYKYLISPKFIAAMISMPLLCAIFDVVGIYGGWM 176 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 V K + +FS + + ++++G +K+ I + +G+ G + + + Sbjct: 177 VGVKLLGVNPGAYFSEMYKSVEWKDVYSGFVKSYSFGIIIAWIGCYKGYYAGHGAEGVSR 236 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV + ++++ D Sbjct: 237 ATTESVVLTSVLILVWDYFLTSILL 261 >gi|295675321|ref|YP_003603845.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] gi|295435164|gb|ADG14334.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] Length = 389 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 173/369 (46%), Gaps = 14/369 (3%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + R +G W + ++ D + + + DLS + +D +G + + + Sbjct: 31 IVRLSGQWTALALARDRDTGHVIPQLRSLTGAQGIGGWDLSRVDSMDHVGGQALWRVWGR 90 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 ++ +F I+ + + R + +G I F+ Sbjct: 91 KLPPG--TALTDTQRDIFERIALLDTVRESAEPVTR-------FDPFTRLGLGIFSFVEH 141 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 142 MQGGVAMLGRVVLDLLAILRKPKLTP--WTEISANIYNAGARALPITALVAFLIGIVLSY 199 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FGA F ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+ Sbjct: 200 LSAQQLRIFGANQFIVNILGLAVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAM 259 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG+ LI PR+ AL +++PLL + N ++ G ++ I + F + Sbjct: 260 RVMGIPHGLRLILPRVIALAVAMPLLVMWTNVISLTGGALAAKLVLGIDMSFFARQLPVV 319 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D++F Sbjct: 320 VPIANLWIGLGKGAVFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAVF 379 Query: 365 AIFYFAIGI 373 AI + +G+ Sbjct: 380 AILFQNVGL 388 >gi|294084216|ref|YP_003550974.1| organic solvents resistance ABC transporter [Candidatus Puniceispirillum marinum IMCC1322] gi|292663789|gb|ADE38890.1| ABC-type transport system involved in resistance to organic solvents [Candidatus Puniceispirillum marinum IMCC1322] Length = 258 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 123/254 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + LG + T ++ + L RQ +G +PVV L + Sbjct: 5 VRNIGRAVLNFLASLGRITLFTLAAIRWTFFPPYYWQQLWRQTLDIGYYSLPVVGLTTLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G V+A Q ++F AE ++ + RE+G +L +M+AGR G+++ AEIG+M++ Sbjct: 65 SGMVLALQSYTGFARFSAEDTVATVVVLSVTRELGPVLAGLMVAGRIGASMAAEIGTMRV 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ ++ L++PRI A + LP L ++ + + G IV +++ Sbjct: 125 TDQIDALDTLSTRPMQYLVAPRIMAGTLCLPFLVLIGDIIGVFGGYIVGVYRLGFNPSIY 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 SR +++I GL+KA I ++ G+ G + +G+ T VV S ++ Sbjct: 185 LSRTLEYLEVSDITLGLVKAAVFGFLIALMGCYHGYHSGRGAEGVGRATTNAVVSSSILI 244 Query: 358 IIIDSLFAIFYFAI 371 +I + L YF + Sbjct: 245 LIANYLVTALYFGV 258 >gi|170691590|ref|ZP_02882755.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] gi|170143795|gb|EDT11958.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] Length = 389 Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 + R +G W + ++ + + DLS I +D +G + + Sbjct: 31 IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +L I + +L+ + + +G I F Sbjct: 91 RMPPDTELTDTQRDIFERIALLDTVRETAEPVIRF----------DPFTRLGLAIFSFFE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAITP--WTEISANIYNAGTKALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + + A+ G ++ I + F Sbjct: 259 MRVMGIPHGLRLILPRVIALGVAMPLLVMWTDIIALTGGAVAAKIVLGIDMSYFARALPG 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I I GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIAGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|205355658|ref|ZP_03222428.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346435|gb|EDZ33068.1| putative ABC transport system permease protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 337 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 13/332 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKD 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + KI +G+++ + LF L +++ K +K ++ F +GK ++ + Sbjct: 68 KNIKIAKEGLNSRFQTLFELCEKNYQRLSKTKKSHKN-----FSEYFIDLGKLSLELLKI 122 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ + F+ ++ + + +P+VIL + + G V+A Sbjct: 123 LRKFINFTGAFFTSLFLCLKNPKNFR--FIAFLYHIENSAFKALPIVILTALLVGVVLAY 180 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI +EI A+ Sbjct: 181 QAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITDEIAAM 240 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG +I PR+ AL+I++PL+ +++ +IIG +V DI FA F F Sbjct: 241 NTMGFRSFEFIIIPRVMALVIAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLRHFREA 300 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + +IF GL KAP IG++A GF V Sbjct: 301 VDIKHIFIGLAKAPIFGFLIGLIACFRGFEVK 332 >gi|307728301|ref|YP_003905525.1| hypothetical protein BC1003_0230 [Burkholderia sp. CCGE1003] gi|307582836|gb|ADN56234.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003] Length = 389 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 + R +G W + ++ + + DLS I +D +G + + Sbjct: 31 IVRLSGQWTALALARDRATGHVIPQLRSLEGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 90 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + +L I + +L+ + + +G I F Sbjct: 91 RMPPDTELTATQRDIFERIALLDTVRETAEPVVRF----------DPLTRLGLGIFSFFE 140 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 141 HLYGGVAMLGRVVLDLLAIARKPAITP--WTEISANIYNAGTRALPITALVAFLIGIVLS 198 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 199 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 258 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 259 MRVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGAVAAKIVLGIDMSYFARALPG 318 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 319 VVPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 378 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 379 FAILFQNVGL 388 >gi|296160361|ref|ZP_06843178.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] gi|295889342|gb|EFG69143.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] Length = 377 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 170/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 + R +G W + ++ + + ++ DLS I +D +G + + Sbjct: 19 IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ K + +G I F Sbjct: 79 KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 129 HLYGGVAMLGRVVLDLLAIARKPKITP--WTEISANVYNAGTQALPITALVAFLIGIVLS 186 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAAKIVLGIDMSYFARALPG 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 367 FAILFQNVGL 376 >gi|91781621|ref|YP_556827.1| ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91685575|gb|ABE28775.1| Putative ABC transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 377 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 170/370 (45%), Gaps = 16/370 (4%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 + R +G W + ++ + + ++ DLS I +D +G + + Sbjct: 19 IVRLSGQWTALALARDRATGHVIPLLLSLVGAEGIGGWDLSRIDRMDHVGGQALWRVWGH 78 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 K L I + +L+ K + +G I F Sbjct: 79 KMPADTTLTDTQRDIFERIALLDTVRETAEPVIK----------LDPFTRLGLAIFSFFE 128 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 129 HLYGGVAMLGRVVLDLLAIVRKPKITP--WTEISANVYNAGTQALPITALVAFLIGIVLS 186 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 A QL FGA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA Sbjct: 187 YLSAQQLRLFGANQYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDA 246 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 247 MRVMGIPHGLRLILPRVLALGVAMPLLVMWTNIIALTGGALAARIVLGIDMSYFARALPG 306 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++ Sbjct: 307 VVPVANLWIGLGKGVVFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAV 366 Query: 364 FAIFYFAIGI 373 FAI + +G+ Sbjct: 367 FAILFQNVGL 376 >gi|237751540|ref|ZP_04582020.1| ABC transport system permease [Helicobacter bilis ATCC 43879] gi|229372906|gb|EEO23297.1| ABC transport system permease [Helicobacter bilis ATCC 43879] Length = 387 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 2/276 (0%) Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 P R N F + IG+ V F + S + +G+ + C F+ SLI Sbjct: 114 PYRPKRLNIFSSFFSFIGQWCVSFYQTALSFFNFMGMFLHFFMLGCLKPSNFR--FKSLI 171 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +Y G +PV ++ S + G I QGA+QL+ G I S+D + L LRE+G + A Sbjct: 172 YHIYEQGFKALPVGLMTSLIIGYAITLQGAYQLNSMGVPIMSVDTTAKLALREMGPFILA 231 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 ++IAGRS S+ A++GSM++ EE+ A++ M L+ LI PRI ALII +PL+ A+ Sbjct: 232 LVIAGRSASSFTAQLGSMRLTEELSAMKAMNLNIFYFLIIPRILALIIVMPLMVFAADAI 291 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A+ G + I +I F + RF+ T ++ + + G++KAP IGIV G Sbjct: 292 ALFGGMVAIKTSINIGFETYLERFYETVSITHFWIGVVKAPVFGAIIGIVGCFRGLECRG 351 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + S+GK T VV +I +I+ +++F+ + + Sbjct: 352 DTQSIGKMTTMSVVNAIFWIIMANAIFSFIFTRYNL 387 >gi|298530716|ref|ZP_07018118.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] gi|298510090|gb|EFI33994.1| protein of unknown function DUF140 [Desulfonatronospira thiodismutans ASO3-1] Length = 256 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 134/249 (53%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + LG ++ + + + + +QM ++GV+ + VV L S TG Sbjct: 8 LGHQTLGFLQELGRIMVLFLQALSWLVRPPFRIRLFFKQMEFIGVNSLFVVALTSLFTGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q + S FGAE +++ RE+G ++T +M+ GR+GSAI AEIG+M++ E+ Sbjct: 68 VLALQTFYAFSMFGAETLVGATVALSMTRELGPVITGLMVTGRAGSAICAEIGTMRVTEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ M ++ V+ L+ PRI A +I LPLLTI++N I+G +V + DI +F ++ Sbjct: 128 VDALTVMAINPVQYLVLPRIVAGVIMLPLLTIISNTMGILGGYLVGVQLLDIHGGMFLNK 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 T+A+++ GLIKA + +V +GF + +G+ T VV S ++++ Sbjct: 188 IQEHVTMADVYNGLIKASAFGGILTLVGCYKGFYTRGGAEGVGRSTTQAVVMSSVLILVS 247 Query: 361 DSLFAIFYF 369 D F Sbjct: 248 DYFLTALMF 256 >gi|288962766|ref|YP_003453060.1| ABC transport system permease protein [Azospirillum sp. B510] gi|288915032|dbj|BAI76516.1| ABC transport system permease protein [Azospirillum sp. B510] Length = 258 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 123/253 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + G + TG + + + ++RQM +G +PVV L + Sbjct: 4 LAATGRAFLIFLEATGRLALFTGSALSHCVRPPLYPRQILRQMIDIGYYSLPVVGLTALF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F AE ++ + RE+G +L +M+AGR G+A+ AEIG+M++ Sbjct: 64 TGMVLALQSYSGFSRFQAEGAIATVVVLSITRELGPVLAGLMVAGRIGAAMAAEIGTMRV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + + L++PR+ A + +PLL ++A+ + G +V D A + Sbjct: 124 TEQIDALSTLSTNPYKYLVAPRLIAGLTMVPLLVVVADIIGVFGGFLVGVYRLDFNAASY 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R ++ +GL+KA I ++ G+ + +G T VV + ++ Sbjct: 184 INRTWEFLQPVDVISGLVKAAIFGFLIALMGCYHGYHSKGGAQGVGAATTNAVVSASIMI 243 Query: 358 IIIDSLFAIFYFA 370 ++ + L +F+ Sbjct: 244 LVWNYLITGLFFS 256 >gi|187922498|ref|YP_001894140.1| hypothetical protein Bphyt_0491 [Burkholderia phytofirmans PsJN] gi|187713692|gb|ACD14916.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN] Length = 377 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 14/369 (3%) Query: 8 VFRFAGNWKSPEISEIADD---VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + R +G W + ++ + + + DLS I +D +G + + Sbjct: 19 IVRLSGQWTALALARDRATGHVIPLLRSLVGAEGIGQWDLSRIDRMDHVGGQALWRVWGH 78 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 ++ +F I+ + K + R + +G I F Sbjct: 79 KMPPDTT--LTDTQRDIFERIALLDTVREKAEPVIR-------FDPLTRLGLAIFSFFEH 129 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +LG V+ + + +Y G +P+ L++F+ G V++ Sbjct: 130 LYGGVAMLGRVVLDLLAIARKPKITP--WTEISANIYNAGTKALPITALVAFLIGIVLSY 187 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QL FGA + ++++ + +RE+G +L A+++AGRSGSAI A+IG M++ EE+DA+ Sbjct: 188 LSAQQLRLFGANQYIVNILGLSVIRELGPVLAAILVAGRSGSAITAQIGVMRVTEELDAM 247 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG+ LI PR+ AL +++PLL + N A+ G ++ I + F Sbjct: 248 RVMGIPHGLRLILPRVVALGVAMPLLVMWTNIIALTGGALAAKIALGIDMSYFARALPGV 307 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +AN++ GL K I IV GF + +S SLG+ TT VV SI+IVI+ D++F Sbjct: 308 VPVANLWIGLGKGVAFGMLIAIVGCHFGFRIKANSQSLGEGTTTSVVTSITIVILADAVF 367 Query: 365 AIFYFAIGI 373 AI + +G+ Sbjct: 368 AILFQNVGL 376 >gi|242310202|ref|ZP_04809357.1| ABC transporter [Helicobacter pullorum MIT 98-5489] gi|239523499|gb|EEQ63365.1| ABC transporter [Helicobacter pullorum MIT 98-5489] Length = 365 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 8/366 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G W I + + + + L ++D G +++ F+ + Sbjct: 7 ATLRLDGIWDYRISKSILSQLQAI---KLTNVKINIVLGEHFDLDFCGGGVLLEFVTELE 63 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + ++ + Q + + P + + +H I I Sbjct: 64 SQQRIL---ENQLQQNPKSQKIFKILSTKEIPSNTNLTQNIIKIHSDSFIIIKNNIKTLI 120 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 LG ++ + + L + + + V +V L F+ G VIA QG Sbjct: 121 LSLGFLGEILYTFLASFINFKSIR--LKATFYFIQESLIKAVGIVALACFLIGIVIAYQG 178 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + QL QFGA I +++ S+L LRE+ ++TA++IAGRS SA AEIG M+ +EIDA+R Sbjct: 179 SIQLRQFGASILIVEMSSMLTLREMAPIITAIIIAGRSASAFSAEIGMMRATQEIDAMRV 238 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG + + L+ PR+ AL LPL+ +A+ ++G+ V DI F RF Sbjct: 239 MGFNPMTFLVVPRMLALCCVLPLVVFIADLFGLVGSMFVCQIQLDISTEQFLERFLQMVD 298 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + + + G+ KAPF I + GF+V + S+G T VV+SI VI D++ ++ Sbjct: 299 MRHFWVGIAKAPFFGLIISFIGCFHGFSVAKDTRSIGVHTTKSVVESIFFVIAFDAICSV 358 Query: 367 FYFAIG 372 + +G Sbjct: 359 IFTEMG 364 >gi|227822231|ref|YP_002826202.1| toulene ABC transporter, permease protein, putative [Sinorhizobium fredii NGR234] gi|227341231|gb|ACP25449.1| toulene ABC transporter, permease protein, putative [Sinorhizobium fredii NGR234] Length = 321 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 143/324 (44%), Positives = 198/324 (61%), Gaps = 5/324 (1%) Query: 50 IDTIGAELIMYFMEKYH-GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 +DT GA +I FM + ++ L+ + Q + F+ Sbjct: 1 MDTAGAWIIRRFMNGIGSEAGGEIHFAHGGDRYVELVRALPGEL--RQPERSKRKDPLFQ 58 Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 L IG+ V D+ + +ILG + +++ Q+ +GV Sbjct: 59 RLFAPIGEVTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSP--AAIVHQIDRMGVMAT 116 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P++ L+SF+ GA+IAQQGAFQL FGAEIF +DL+ ILQLREIGVLLTA+MIAGRSGSAI Sbjct: 117 PIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAI 176 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK+ EE+DA++ MGL V +L+ PR+ AL I+LPLLTI+ANF+A++GA++V W Sbjct: 177 TAEIGSMKMREEVDALKVMGLSPVGVLVFPRLVALTIALPLLTIIANFAALVGAALVAWT 236 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 Y I A F +R +++ G+IKAPFMA IG+VA EG VG + SLG++VT+ Sbjct: 237 YSGITVATFVARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTS 296 Query: 349 CVVQSISIVIIIDSLFAIFYFAIG 372 VV+SI +VI+ID LFA+FY AI Sbjct: 297 SVVKSIFVVILIDGLFAMFYAAID 320 >gi|302328064|gb|ADL27265.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 364 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 147/352 (41%), Gaps = 14/352 (3%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77 + + ++ + ++ +D S++ +D L+ EK K+ L+ Sbjct: 24 AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 83 Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 I+Q + + ++ N+ +G + + +L I Sbjct: 84 IKQHLQNLRKMVPPEKPQRETN---------NILEMMGGAGFSLLKEVFEVLVLLFTAIY 134 Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 K K + +QM+ G + + L + +A Q + L+ G Sbjct: 135 --WTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGGS 192 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + + L EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M + V+ L+ Sbjct: 193 YLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLVV 252 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR AL I+ P+L+ A+ ++ + + DI F+ + IKA Sbjct: 253 PRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIKA 312 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + ++A +G + ++GK T+ VV +I ++I D+LFA ++ Sbjct: 313 LVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 364 >gi|27363501|ref|NP_759029.1| putative ABC transport system permease [Vibrio vulnificus CMCP6] gi|27359617|gb|AAO08556.1| Putative ABC transport system permease protein [Vibrio vulnificus CMCP6] Length = 357 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 11/354 (3%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75 S + + + ++ S + +V+ +T ID G + ++ + Sbjct: 15 TSEIVGNLWEKANRILDTHPNS-AIVVNAHNLTFIDISGIAFLSDLQTRFRAPGAEISIV 73 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 L L+ + +G+ + + D S A + Sbjct: 74 GLKPSLAELV-------PPAPVENNPSIVGRERGFFERVGRATKEMLIDVGSVARFVKDC 126 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 S + ++ G VP+++LI F+ G +IA + QFGA Sbjct: 127 AVVF--KIGISRRKNVNWATVSDIASRAGADAVPIIMLIGFLMGVIIAFEIGLVAEQFGA 184 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 +F D + I LRE+G L+TA++ AGR+G+A AEIG+ K+NEEI+A+RT G+ V L Sbjct: 185 VLFVADGIGISMLRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALRTFGISPVEFL 244 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI+A I+ LPLLT+ A+ + G ++V +DI F ++ + S ++ + GLI Sbjct: 245 VIPRIYASILVLPLLTVFADIIGVFGGALV-LLKFDISFVQYYHQLLSALSIWDFGFGLI 303 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 KA I ++ + G A G S S+G T+ VV SI +++ID F + Sbjct: 304 KATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT 357 >gi|313672871|ref|YP_004050982.1| hypothetical protein Calni_0908 [Calditerrivibrio nitroreducens DSM 19672] gi|312939627|gb|ADR18819.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens DSM 19672] Length = 256 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 131/248 (52%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + A G + + ++ LI+QM ++G + + V+IL TG V Sbjct: 9 GAPILNLALESGRIFLLLIDSILWIFRPPFRWKLLIKQMEFIGANSISVIILTGTFTGMV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 A Q +FGAE ++ + RE+G +L+A+M+A R+GSAI AEIG+MK+ E+I Sbjct: 69 FAFQSYIGFHKFGAEYMVGTVVGLGMARELGPVLSAIMVAARAGSAITAEIGTMKVTEQI 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ ++ +D V+ L++PRI A ++ +PLL +A F ++G V K DI ++ Sbjct: 129 DALHSLAVDPVQYLVTPRILAGLLVMPLLNSIAVFCGVLGGYFVGVKILDINRTLYLQYM 188 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + L++++ G+IK+ + +V +G AV + +G+ T VV S ++++ D Sbjct: 189 YQYVDLSDLYNGMIKSVVFGLILTLVGCYKGMAVSGGAEGVGRATTESVVLSCILILVFD 248 Query: 362 SLFAIFYF 369 + F F Sbjct: 249 YILTAFMF 256 >gi|320353203|ref|YP_004194542.1| hypothetical protein Despr_1079 [Desulfobulbus propionicus DSM 2032] gi|320121705|gb|ADW17251.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM 2032] Length = 371 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 95/371 (25%), Positives = 169/371 (45%), Gaps = 15/371 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY- 60 S+ G W ++V A++ SI + + + E DT + Sbjct: 12 SQPSRLTVHLQGAWTLRTDPPPPTELVGALDSSI--RTLAFLSTDLAEWDTRLLVFLKAT 69 Query: 61 --FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + L+G+ + +L +L + ++ N + L IG+ Sbjct: 70 TAAARNGGIAVDLEGLPPGVRRLLALSEAV--------PEKVTYGKNVRELLVTRIGRLT 121 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + A G +I A FK + GV +P+V LI+ + Sbjct: 122 LALSGQAREAAAFTGEIILACMALAAGKKPFK--WRDFFYFIQSCGVESLPIVSLIAVLV 179 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +++ GA QL FGA+I+ +L+ + + E+G L++ V+IAGR G+A A++G+M++N Sbjct: 180 GVILSFVGAVQLQMFGAQIYVANLVGLGMVLEMGALMSGVIIAGRIGAAYAAQLGTMQVN 239 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+RTMG+ V L+ PR+ AL++ LPLL + A+ I+G S++ D+ + Sbjct: 240 EEIDALRTMGISPVGFLVLPRMLALMLMLPLLCVYADIMGILGGSVIGVTMLDLSLIEYL 299 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + T L G++KA IG G G + ++G+ T+ VV SI +++ Sbjct: 300 EQTRKTLRLGQCGQGILKASIFGVLIGYAGCLRGMQCGRSALAVGEATTSAVVTSIVLIV 359 Query: 359 IIDSLFAIFYF 369 + DS+ + Sbjct: 360 VSDSIITFLLY 370 >gi|56710306|dbj|BAD81021.1| permease component of ABC-type transport system [uncultured bacterium] Length = 405 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 17/378 (4%) Query: 3 ENGITVFRFAGNWKS----PEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 + V +G W+ P + +A+ + A + Q+ VD +A+ D+ + Sbjct: 38 QGDSLVVALSGAWQLGRPAPRFAPLAESALSAGTGATQTARVTVDAAALGSWDSSLLIFL 97 Query: 59 MY---FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 F E + + I L +L + + + P L +G Sbjct: 98 RQGQEFCEAHKLDFVTDALPDRITSLLALARAVPERAVDAEVPALP--------LRARVG 149 Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 V + S + LG V+ + + + G +P+V LI+ Sbjct: 150 LAGVSAWDASMAAVTFLGEVLQRGALLLRGRVRMR--WREFWVVVQSNGSGALPIVTLIA 207 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + G +IA G L +FGA ++ L+ LRE+G L+T ++IAGR+G+A AE+GSM Sbjct: 208 LLVGVIIAFLGVVVLKRFGAGYYASYLVGFGMLREMGALMTGIIIAGRTGAAFAAELGSM 267 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 KI EEIDA+ T+G+ V L+ PR+ L + +PLL + A+ I+G V D+ Sbjct: 268 KITEEIDALTTLGISPVDHLVLPRVLGLFVMMPLLVVYADLVGIVGGMGVAVAMLDVTPT 327 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F + + L++ G+ K IG+ +G G + ++G+ T+ VV SI+ Sbjct: 328 QFMNGLLTAVVLSDALLGVFKGLIFGAIIGLAGCMKGLQAGSDAGAVGRAATSAVVISIT 387 Query: 356 IVIIIDSLFAIFYFAIGI 373 +VI+ +++ + I Sbjct: 388 LVILANAVVDWLAALLLI 405 >gi|148263112|ref|YP_001229818.1| hypothetical protein Gura_1039 [Geobacter uraniireducens Rf4] gi|146396612|gb|ABQ25245.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 256 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 131/252 (51%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + K + + S +G +++ + G + +++Q+ ++G V+ L + Sbjct: 5 VEKLGSLTLSILQEMGRMVNFIIYAFYLIIRSPGKPVHILKQIRFIGAKSFFVIFLTASF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG + L++FG+E +++ +RE+G +LTA+M+ GR+GSAI AEIG M+I Sbjct: 65 TGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVTGRAGSAISAEIGIMRI 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ TM L+ + L+SP++ A IISLPLL + + I G +V K + + Sbjct: 125 TEQIDALETMALEPCKYLVSPKLLAAIISLPLLCAIFDVVGIYGGYLVGVKLLGVNPGAY 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F + ++++G+IK+ I + +G+ G + + + T VV S +V Sbjct: 185 FHEMEKSVEWKDVYSGIIKSVSFGVIIAWICCYKGYFAGHGAEGVSRATTAAVVMSSVMV 244 Query: 358 IIIDSLFAIFYF 369 +I D Sbjct: 245 LIWDYFLTSVLL 256 >gi|261416607|ref|YP_003250290.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373063|gb|ACX75808.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 354 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 75/352 (21%), Positives = 147/352 (41%), Gaps = 14/352 (3%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDT---IGAELIMYFMEKYHGKIKLQGVSTH 77 + + ++ + ++ +D S++ +D L+ EK K+ L+ Sbjct: 14 AANSKKLLSSCKSALTKGELHLDGSSLASMDYSADAFFALLAELSEKTGNKLVLEHFPPE 73 Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 I+Q + + ++ N+ +G + + +L I Sbjct: 74 IKQHLQNLRKMVPPEKPQRETN---------NILEMMGGAGFSLLKEVFEVLVLLFTAIY 124 Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 K K + +QM+ G + + L + +A Q + L+ G Sbjct: 125 --WTIVGPFDKGKIHFGGITKQMFKSGSEAMGICFLFVGLICLTMALQSSVMLNAVGGGS 182 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + + L EIG LLT +++AGRSGSA+ AEI +M + EE+ A+++M + V+ L+ Sbjct: 183 YLASGLGFLIFAEIGPLLTTIILAGRSGSAMAAEIANMSVCEEVKALKSMAIPPVQYLVV 242 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR AL I+ P+L+ A+ ++ + + DI F+ + IKA Sbjct: 243 PRFIALSITTPILSFSASIVGSFAGFLIAYFFCDISFSNYMMGLRDGIDPMTFLKSTIKA 302 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + ++A +G + ++GK T+ VV +I ++I D+LFA ++ Sbjct: 303 LVFGWIVTLIACNKGLNAHGGAEAVGKATTSSVVAAICTIVISDTLFAFIFY 354 >gi|197120798|ref|YP_002132749.1| hypothetical protein AnaeK_0378 [Anaeromyxobacter sp. K] gi|196170647|gb|ACG71620.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K] Length = 370 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 88/365 (24%), Positives = 155/365 (42%), Gaps = 10/365 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G W ++ + + + + ++D S + +DT GA L+ Sbjct: 16 VHCSGAWTVHLVAGLDRALRRL--AWPEHVAVVIDASGVAAMDTAGAWLLRRAARDLERG 73 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + ++ E + + +G+ Sbjct: 74 GRPVTLTLRPEH------EALLALVTSSGEVAPRRARERARFLSELGRSAWSSALAIGGV 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + A + + + + G +P L+SF G V+A QGA Sbjct: 128 LTLVGELAGRVARARAGPLRVRA--RQAVLHVQSAGFEALPTTALLSFFVGVVLASQGAT 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGA I DL+ + LRE+ L+TA+++AGRSGSA A+IG+MK+ EI+++R G Sbjct: 186 LLRPFGAGILIADLVGLAMLRELSPLVTAIVVAGRSGSAYAAQIGAMKMAGEIESLRAGG 245 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + V L+ PRI AL + +PLLT+ A+ + GA++V + F R + Sbjct: 246 VSPVDALVVPRIAALALVVPLLTVAADVLGLAGATLVARAELGMHAPEFLGRVAREVHAS 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + G+ KAP + V +G + S+G++ T VVQS+ +V++ D L + Sbjct: 306 SYLLGVAKAPVFGVIVAAVGCHQGLRASDDAGSVGRRTTGAVVQSMFLVVLADGLVLVVS 365 Query: 369 FAIGI 373 +GI Sbjct: 366 RQLGI 370 >gi|15603974|ref|NP_220489.1| hypothetical protein RP096 [Rickettsia prowazekii str. Madrid E] gi|81554918|sp|Q9ZE51|Y096_RICPR RecName: Full=Probable ABC transporter permease protein RP096 gi|3860665|emb|CAA14566.1| unknown [Rickettsia prowazekii] gi|292571688|gb|ADE29603.1| ABC transporter permease protein [Rickettsia prowazekii Rp22] Length = 259 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 131/251 (52%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + A +G+ + +S K +L +IRQ+ ++G +PVV + +F +GA Sbjct: 9 VGKHTIKFAQSVGIFSLFSFIAISSIIKPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSGA 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q S+F AE ++ + RE+G +L +++AGR G++I AEI +M++ E+ Sbjct: 69 VLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGASIAAEIATMRVTEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V D + + Sbjct: 129 VDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDIIGVMGGYLVGIYKLDFNSTAYLTS 188 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ +GLIKA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 189 TFQYLEPIDVISGLIKATVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILIS 248 Query: 361 DSLFAIFYFAI 371 + L +F + Sbjct: 249 NYLITELFFKV 259 >gi|144899037|emb|CAM75901.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 257 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 119/253 (47%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G + + G + + + +R M +G +PVV L + Sbjct: 4 VAAIGRIFLAFLSHVGRLSAFAGTALSHVVRPPFYPRLTLRAMVEIGYYSLPVVGLTAVF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F AE ++ + RE+ +L +M+AGR G+++ AEIG+M++ Sbjct: 64 TGMVLALQSYSGFSRFAAESAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + + L++PR+ A ++ +P L ++A+ + G IV + + Sbjct: 124 TEQIDALTTLSTNPFKYLVAPRLLAGLLMVPCLVLVADIIGVFGGYIVGVYKLGFNPSTY 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +R ++ +GL KA I ++ G+ + +G T VV + ++ Sbjct: 184 LARTWEFLEPLDVISGLTKAAVFGFIISLMGCYHGYYSRGGAQGVGAATTNSVVSAAIMI 243 Query: 358 IIIDSLFAIFYFA 370 +I + + YF Sbjct: 244 LIFNYVITALYFG 256 >gi|83591748|ref|YP_425500.1| hypothetical protein Rru_A0408 [Rhodospirillum rubrum ATCC 11170] gi|83574662|gb|ABC21213.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 257 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 119/249 (47%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G + TG + + F + RQ+ +G +PVV L + TG V Sbjct: 8 GRVFLTFLRHVGRLSVFTGTALSHCVRPPFFPRLIGRQLVEIGYYSLPVVGLTAIFTGMV 67 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ Q ++F AE + ++ + RE+G +L +M+AGR G+A+ AEIG+MK+ E+I Sbjct: 68 LSLQSHSGFARFSAEGATATVVVLSMTRELGPVLAGLMVAGRIGAAMAAEIGTMKVTEQI 127 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + + L+ PR+ A + LP+L + A+ + G ++ + + + Sbjct: 128 DALTTLATNPYKYLVVPRLIAGVTMLPILVLTADIIGVFGGYLIGVYKLGFNPSNYIAST 187 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +GL+KA I ++ G + +G T VV + ++++ + Sbjct: 188 WEFLEPMDVISGLVKASVFGFIIALMGCYHGSQSKGGAQGVGAATTNAVVSASILILVCN 247 Query: 362 SLFAIFYFA 370 + +FA Sbjct: 248 YMITELFFA 256 >gi|67458472|ref|YP_246096.1| ABC transporter permease protein [Rickettsia felis URRWXCal2] gi|75537058|sp|Q4UNC7|Y080_RICFE RecName: Full=Probable ABC transporter permease protein RF_0080 gi|67004005|gb|AAY60931.1| ABC transporter permease protein [Rickettsia felis URRWXCal2] Length = 259 Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 130/252 (51%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G + +S + +L +IRQ+ ++G +PVV + +F +G Sbjct: 8 SVGKRTIKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEI +M++ E Sbjct: 68 AVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V D + + Sbjct: 128 QVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSTAYLT 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 188 STFHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247 Query: 360 IDSLFAIFYFAI 371 + L +F + Sbjct: 248 SNYLITELFFKV 259 >gi|114777488|ref|ZP_01452485.1| ABC-type transport system involved in resistance to organic solvents [Mariprofundus ferrooxydans PV-1] gi|114552270|gb|EAU54772.1| ABC-type transport system involved in resistance to organic solvents [Mariprofundus ferrooxydans PV-1] Length = 257 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 81/255 (31%), Positives = 128/255 (50%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + +GL S L L++Q VGV +PVV+L + Sbjct: 3 KLLTATGKLTEGLCIHIGLYASTFAGTVRRMSSRPWHLRMLLQQAEEVGVQSLPVVMLTA 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+A Q +F AE + ++S+ +RE+G +L +M+AGR G+A AE+G+M Sbjct: 63 LFTGMVLALQSYIVFHRFAAESLTGLVVSMSLVRELGPVLVGLMVAGRVGAAFAAELGTM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ T+ D VR LI PR+ A+ + +PLL ++A+F I G + D + Sbjct: 123 RVTEQIDALWTLSTDPVRYLIMPRLIAVTLMMPLLVVVADFIGIYGGYAISIYLLDQNPS 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 V+ L++ +TGL+KA F IGI+ EGF + +G T VV S Sbjct: 183 VYIENTTQYMELSDFYTGLVKAGFFGILIGIIGCTEGFNCKGGAAGVGTATTRAVVISCM 242 Query: 356 IVIIIDSLFAIFYFA 370 ++I D + FA Sbjct: 243 SILISDYFLTAWMFA 257 >gi|91206155|ref|YP_538510.1| ABC transporter permease protein [Rickettsia bellii RML369-C] gi|157826543|ref|YP_001495607.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389] gi|122425169|sp|Q1RGU3|Y1340_RICBR RecName: Full=Probable ABC transporter permease protein RBE_1340 gi|91069699|gb|ABE05421.1| ABC transporter permease protein [Rickettsia bellii RML369-C] gi|157801847|gb|ABV78570.1| ABC transporter permease protein [Rickettsia bellii OSU 85-389] Length = 259 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 130/252 (51%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G + S + + +I+Q+ ++G +PVV + +F +G Sbjct: 8 SIGKRTIRLAQSIGKFSIFSLAAITSIIRPPLYFSLIIKQLLFIGFYSLPVVAMTTFFSG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEIG+M++ E Sbjct: 68 AVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIGTMRVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D ++ L+ P++ A II++P L ++ + ++G +V D + + + Sbjct: 128 QVDALYTLSTDSIKYLVFPKVIAAIITMPCLVLIGDVIGVMGGYLVGVYKLDFNSSTYLT 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247 Query: 360 IDSLFAIFYFAI 371 + L +F + Sbjct: 248 SNYLITELFFKV 259 >gi|85858832|ref|YP_461034.1| organic solvents resistance ABC transporter permease [Syntrophus aciditrophicus SB] gi|85721923|gb|ABC76866.1| ABC-type transport system involved in resistance to organic solvents, permease component [Syntrophus aciditrophicus SB] Length = 259 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 74/250 (29%), Positives = 124/250 (49%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +G +I A +++ L + +QM +VGV + VV+L TG Sbjct: 10 SLGRRILHGVEEMGRIILLFLSVVAWTFRPPLRLRLIFKQMEFVGVKSIFVVVLTGAFTG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG F AE +++ RE+G +LT++M+ R+GSA+ AE+G+M++ E Sbjct: 70 MVMALQGYHGFKMFSAESLVGATVALGMTRELGPVLTSLMVTARAGSAMAAELGTMRVTE 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ M + ++ LI PR+ A I+ LPLLT++++F I+G V +I VF Sbjct: 130 QIDALYVMAANPIQHLIVPRMIASILMLPLLTVVSDFVGILGGYFVGVSVLNINEGVFVK 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L +I+ GLIKA + ++ +GF + +G+ T VV S +++ Sbjct: 190 NITRIVELGDIYNGLIKAACFGLILSLIGCYKGFHARGGAEGVGRATTEAVVLSSISILV 249 Query: 360 IDSLFAIFYF 369 D F Sbjct: 250 GDYFLTAIMF 259 >gi|157964160|ref|YP_001498984.1| ABC transporter permease protein [Rickettsia massiliae MTU5] gi|157843936|gb|ABV84437.1| ABC transporter permease protein [Rickettsia massiliae MTU5] Length = 264 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 129/252 (51%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G + +S + +L +IRQ+ +G +PVV + +F +G Sbjct: 13 SVGKRTIKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLLIGFHSLPVVAMTTFFSG 72 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEI +M++ E Sbjct: 73 AVLALQSYTGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 132 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V D A + + Sbjct: 133 QVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 192 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 193 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 252 Query: 360 IDSLFAIFYFAI 371 + L +F + Sbjct: 253 SNYLITELFFKV 264 >gi|157803278|ref|YP_001491827.1| ABC transporter permease protein [Rickettsia canadensis str. McKiel] gi|157784541|gb|ABV73042.1| ABC transporter permease protein [Rickettsia canadensis str. McKiel] Length = 259 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 62/252 (24%), Positives = 127/252 (50%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G + +S + + +IRQ+ ++G +PVV + +F +G Sbjct: 8 AVGKRTIKFAQNIGSFSLFSFAAVSSIIRPPLYFSLIIRQLLFIGFYSLPVVTMTTFFSG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEI +M++ E Sbjct: 68 AVLALQSYNGFSRFSAESSIATVVVLSLTRELGPVLVGLMVAGRVGASIAAEIATMRVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D ++ L+ PR+ ++++P L ++ + ++G +V + + Sbjct: 128 QVDALYTLSTDPIKYLVFPRVITAMLTMPCLVLIGDVIGVMGGYLVGVYKLGFNSTAYLT 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247 Query: 360 IDSLFAIFYFAI 371 + L +F + Sbjct: 248 SNYLITELFFKV 259 >gi|258543490|ref|YP_003188923.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256634568|dbj|BAI00544.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256637626|dbj|BAI03595.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256640678|dbj|BAI06640.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256643735|dbj|BAI09690.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256646790|dbj|BAI12738.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256649843|dbj|BAI15784.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256652831|dbj|BAI18765.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655887|dbj|BAI21814.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 385 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 10/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ G W A + +D + + D+ + Sbjct: 24 TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPVEPGHTLHIDTTGLKGWDSAFVAFLWDV 80 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 + L++ + +P R+ + + +G +K Sbjct: 81 KQAASKAQLHFDEQNLPAPAQRLLALLPDAPAEPAQPPRNT-----EGIFARVGDATLKG 135 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + ++ + + + + + L+ ++ G + +V +++F+ GA+ Sbjct: 136 LTETGTVSELALETAKGATQAVRGKSAMRM--KDLLLDIWNAGPDALLIVGIVNFLVGAI 193 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A G +L +F AEI+ DL+ I REI ++TA+++AGR+G A A I +M NEEI Sbjct: 194 LAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGNEEI 253 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ G+ ++ P I +L + +PLL + AI G V D+ ++ Sbjct: 254 DALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYWIST 313 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L G IK+ F A I + A + G G + +G T VV I +I +D Sbjct: 314 FDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGVAATRAVVIGIVGIIAMD 373 Query: 362 SLFAIFYFAIGI 373 ++FA+ A+GI Sbjct: 374 AIFAVIANALGI 385 >gi|28898136|ref|NP_797741.1| putative ABC transport system permease [Vibrio parahaemolyticus RIMD 2210633] gi|153836560|ref|ZP_01989227.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|260366435|ref|ZP_05778874.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260878481|ref|ZP_05890836.1| ABC-type transport system, permease protein [Vibrio parahaemolyticus AN-5034] gi|260897062|ref|ZP_05905558.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901858|ref|ZP_05910253.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28806350|dbj|BAC59625.1| putative ABC transport system permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149750158|gb|EDM60903.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|308087695|gb|EFO37390.1| ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308091102|gb|EFO40797.1| ABC-type transport system, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108149|gb|EFO45689.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308113110|gb|EFO50650.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 357 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 11/354 (3%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75 S + ++ + + S +V+ S +T +D G + ++ + Sbjct: 15 TSAMVGDLWEKANDILESYPDSP-IVVNASNLTFVDISGVAFLSDLQTRFRPPGAEISII 73 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 L L+ ++ + +G + + S + Sbjct: 74 GLSASLAELVPPSNIENAPQIPRGED-------GFFERVGNATREMLVYVGSVVRFIKEC 126 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + + ++ G VP+++LI F+ G +IA + QFGA Sbjct: 127 VLVF--KLGINRRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQFGA 184 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 +F D + I RE+G L+TA++ AGR+G+A AEIG+ K+NEEI+A+ T G+ V L Sbjct: 185 VLFVADGIGISMFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPVEFL 244 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI+A ++ LPLLT+LA+ ++G ++V +DI F ++ + + ++ ++F GLI Sbjct: 245 VIPRIYASVLVLPLLTVLADIIGVLGGALV-LLKFDISFVQYYHQLLNALSVWDLFFGLI 303 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 KA I ++ + G A G S S+G T+ VV SI +++ID F + Sbjct: 304 KATTFGFIIAVIGCERGLATGQGSTSVGLAATSAVVSSIIWIVVIDGFFTVLLT 357 >gi|15892052|ref|NP_359766.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|34580917|ref|ZP_00142397.1| ABC transporter permease protein [Rickettsia sibirica 246] gi|229586334|ref|YP_002844835.1| ABC transporter permease protein [Rickettsia africae ESF-5] gi|81528535|sp|Q92JD8|Y129_RICCN RecName: Full=Probable ABC transporter permease protein RC0129 gi|15619171|gb|AAL02667.1| ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|28262302|gb|EAA25806.1| ABC transporter permease protein [Rickettsia sibirica 246] gi|228021384|gb|ACP53092.1| ABC transporter permease protein [Rickettsia africae ESF-5] Length = 259 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 130/252 (51%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G + +S + +L +IRQ+ ++G +PVV + +F +G Sbjct: 8 SVGKRTVKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEI +M++ E Sbjct: 68 AVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V D A + + Sbjct: 128 QIDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247 Query: 360 IDSLFAIFYFAI 371 + L +F + Sbjct: 248 SNYLITELFFKV 259 >gi|212702437|ref|ZP_03310565.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098] gi|212674098|gb|EEB34581.1| hypothetical protein DESPIG_00454 [Desulfovibrio piger ATCC 29098] Length = 375 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 152/370 (41%), Gaps = 7/370 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+W + + + +++ D+ ++ + Sbjct: 13 GERLQVTVSGSWAINTPWPPQCADALQQLQGPGIRQLHLAAASLDAWDSSLLVFLVQLHK 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + L + ++ + + + L +G ++ Sbjct: 73 AASAARIEI-----SQDLPAGLARLLHLAFAIPAQAGAARSDHRQGLFARVGGAVMSLPP 127 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 LG V + + + MY GV +P++ + S + G ++A Sbjct: 128 RCADFLEFLGDVTLSIWRLILGRAGMRMQ--DFVEAMYECGVRALPIISITSLLFGLILA 185 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 GA QL+QFGA+I+ L+ I LR +G ++ V+++GR G+A A IG+M++NEE+DA Sbjct: 186 FVGAVQLTQFGAQIYVAGLVGIGMLRVMGAVMVGVVMSGRVGAAYAAMIGTMQVNEEVDA 245 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + T+G+ + L+ PR+ AL+ +PLLT+ A+ I+G +V + A + + Sbjct: 246 LTTLGISPIDFLVLPRMLALMFMVPLLTVYADLMGILGGYVVGVSMLGLSSAEYLNATMQ 305 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + G+ I + +G G + ++G TT VVQSI +II ++ Sbjct: 306 MVSFVHGLIGIAYGTVFGVIIALAGCYQGIRCGRSAQAVGLATTTAVVQSIVGIIIATAI 365 Query: 364 FAIFYFAIGI 373 I +GI Sbjct: 366 ITIICNVLGI 375 >gi|157825268|ref|YP_001492988.1| ABC transporter permease protein [Rickettsia akari str. Hartford] gi|157799226|gb|ABV74480.1| ABC transporter permease protein [Rickettsia akari str. Hartford] Length = 259 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 131/251 (52%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + A +G + +S+ + +L +IRQ+ ++G +PVV + +F +GA Sbjct: 9 VGKRTIKCAQSVGSFSLFSFAAVSSTIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSGA 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q S+F AE ++ + RE+G +L +M++GR G++I AEI +M++ E+ Sbjct: 69 VLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLMVSGRVGASIAAEIATMRVTEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ T+ D ++ L+ PR+ A I+++P L ++ + ++G +V D + + Sbjct: 129 VDALYTLSTDPIKYLVFPRVIATIVTMPCLVLIGDIIGVMGGYLVGVYKLDFNSTAYLTS 188 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ +GL+KA I I++ G+ G + +G+ T+ VV S I++I Sbjct: 189 TLHYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSIIILIS 248 Query: 361 DSLFAIFYFAI 371 + L +F + Sbjct: 249 NYLITELFFKV 259 >gi|157828003|ref|YP_001494245.1| ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932699|ref|YP_001649488.1| ABC transporter permease [Rickettsia rickettsii str. Iowa] gi|157800484|gb|ABV75737.1| ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907786|gb|ABY72082.1| ABC transporter permease protein [Rickettsia rickettsii str. Iowa] Length = 259 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 130/252 (51%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G + +S + +L +IRQ+ ++G +PVV + +F +G Sbjct: 8 SVGKRTVKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEI +M++ E Sbjct: 68 AVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V D A + + Sbjct: 128 QVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247 Query: 360 IDSLFAIFYFAI 371 + L +F + Sbjct: 248 SNYLITELFFKV 259 >gi|258404804|ref|YP_003197546.1| hypothetical protein Dret_0676 [Desulfohalobium retbaense DSM 5692] gi|257797031|gb|ACV67968.1| protein of unknown function DUF140 [Desulfohalobium retbaense DSM 5692] Length = 256 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 130/250 (52%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G + G C + + +QM +VGV VVIL TG Sbjct: 7 ALGAGTMRGLQQMGQMALLLGSACGWLLRRPFRIRLFFKQMEFVGVHSGFVVILTGLFTG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q + F AE +++ RE+G ++TA+M+ GR+GSA+ AEIG+M++ E Sbjct: 67 MVLALQTYYAFRMFSAESLVGATVALSMTRELGPVITALMVTGRAGSAMAAEIGTMRVTE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ M ++ V+ L++PR+ A ++ LPLLT++++F I G +V K I ++F + Sbjct: 127 QVDALEVMAINPVQYLVTPRLLAGMVMLPLLTVISDFVGIAGGYLVGVKMLGINSSMFMN 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + L++I+ GL KA + +V +GF + +G+ T VV + ++++ Sbjct: 187 KIYDLLELSDIYNGLTKAVVFGLILTLVGCYKGFYTSGGAEGVGRSTTQAVVLASVLILM 246 Query: 360 IDSLFAIFYF 369 D + F Sbjct: 247 SDYILTALMF 256 >gi|281356267|ref|ZP_06242760.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] gi|281317636|gb|EFB01657.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] Length = 272 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 136/269 (50%), Gaps = 2/269 (0%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + S K L + + +D C + T + K + + + Sbjct: 2 NARSPRSLKQLCIEVADSAIALRDDLCLFCTFSRQLGKATLDAIRHPRKIRRY--DVYYY 59 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 M G +P++ L+ F+ G ++A Q QL +FG E + ++L+ + + E+ L+TAV+ Sbjct: 60 MDNCGSDAMPIIALLGFLIGVILAFQAIVQLRRFGVESYVVNLVGTVIVTELAPLVTAVV 119 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +AGR+GS+ AE+G+MK +EEIDA+ TMG D R L+ P++ AL++ +P LTI+++ I Sbjct: 120 LAGRTGSSFAAELGTMKADEEIDAMVTMGFDPGRFLLFPKMLALLLIMPGLTIISDVCGI 179 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 G +++ + + ++ ++ GL+K+ A + + +G ++ Sbjct: 180 AGGMVIVCSMLQVSTGEYLTKTFEIIQPIDLAQGLVKSFVFAVIVAGIGCMKGLNAERNA 239 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G+ T+ VV SI ++++ D++ + Sbjct: 240 QGVGRSATSAVVTSIFLIVVTDAILTSCF 268 >gi|148261999|ref|YP_001236126.1| hypothetical protein Acry_3017 [Acidiphilium cryptum JF-5] gi|146403680|gb|ABQ32207.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5] Length = 362 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 169/368 (45%), Gaps = 19/368 (5%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 V G + ++E + + +DLS IDT GA L++ Sbjct: 13 DGPVIALTGPLTAAALTEAWPRAIAVARAA--QGVMTLDLSRAARIDTSGAALLLALERG 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + G+ + QG++ E L + + + P R+ + Sbjct: 71 HDGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRT 116 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G I T A +G + R G +P+VI++ F+ G ++A Sbjct: 117 LGVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAF 174 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A + QFGA+I+ L+S+ RE+G LL AV++AGR+GSA AE+G+M +NEE+ A+ Sbjct: 175 QSAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAAL 234 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG+D +L+ PR+ A ++ +P L + + S ++G V+ P + ++ Sbjct: 235 TTMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMA 293 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ GL+K+ A+G++ + G G ++G+ T+ VV I I++D LF Sbjct: 294 TSPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILLDGLF 353 Query: 365 AIFYFAIG 372 A+ + +G Sbjct: 354 AVILYRLG 361 >gi|218679258|ref|ZP_03527155.1| putative transmembrane component of ABC transporter [Rhizobium etli CIAT 894] Length = 281 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 135/282 (47%), Positives = 189/282 (67%), Gaps = 2/282 (0%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 ++ +P++ + + +GK ++ + +ILG + Sbjct: 1 EEPAKPEPEQQEKVSLVARIFAPVGKMTYDLWDNFAASMYILGSAVRGAQMKFGRGSGVS 60 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 S++ Q+ ++GV VP+++L+SF+ GA+IAQQGAFQL FGAE+F +DL+ ILQLRE Sbjct: 61 P--ASIVNQIDHMGVRAVPIILLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLRE 118 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 IGVLLT++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLL Sbjct: 119 IGVLLTSIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLL 178 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 T+LANF+++ GA+ V W Y I FA F SR H TL+ + +G+IKAPFMA IGIVA Sbjct: 179 TVLANFASLAGAAAVAWGYSGITFANFLSRLHEAVTLSTVLSGMIKAPFMALVIGIVAAV 238 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 EG VG + SLG+ VT VV++I +VI++D LFA+FY AI Sbjct: 239 EGLKVGGSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAID 280 >gi|283779915|ref|YP_003370670.1| hypothetical protein Psta_2136 [Pirellula staleyi DSM 6068] gi|283438368|gb|ADB16810.1| protein of unknown function DUF140 [Pirellula staleyi DSM 6068] Length = 289 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 121/267 (45%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 + + ++ + +G + + +L+ Y VG Sbjct: 11 QPPAGILQSLADQVTDWGAVVVDGLITIGDLTIFAMRTISWMLFKLPRRETLLPNFYQVG 70 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V +PV+ L G V+A Q F G E ++++ +RE+G +L A M+AGR Sbjct: 71 VLSLPVIALTGTFIGMVLAVQSYFTFRDLGLETRMGAVINMTLVRELGPVLAATMLAGRV 130 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G A+ AE+G+M++ E+IDA+ +MG D + L+ PR A + +P LTI+A+F ++G Sbjct: 131 GCAMAAELGTMRVTEQIDALESMGADPIYYLVVPRFLACLFLIPTLTIMADFMGVVGGYF 190 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 I ++ ++F+G++K+ F AI +V+ GF + +G+ Sbjct: 191 YSTVVLSIDKHHYWYNSEQFVGNFDLFSGILKSLFFGAAIAVVSCYRGFHCTPGAEGVGR 250 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAI 371 T V S ++++ID + + Sbjct: 251 AATAAFVHSFVLILVIDLFLGKMLYTL 277 >gi|303256383|ref|ZP_07342397.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331001491|ref|ZP_08325109.1| hypothetical protein HMPREF9439_02780 [Parasutterella excrementihominis YIT 11859] gi|302859874|gb|EFL82951.1| ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329568220|gb|EGG50037.1| hypothetical protein HMPREF9439_02780 [Parasutterella excrementihominis YIT 11859] Length = 354 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 13/348 (3%) Query: 26 DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLI 85 + + + S I D S +T D G L+ + KL VS IE L++ + Sbjct: 20 KIWEQVLGAESSGQTIFDASDLTFCDESGLTLLYELRSR-PDAFKLINVSASIETLYNTM 78 Query: 86 SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145 K +K + +GK + + + LG + Sbjct: 79 LKNFSPKPVEKKS---------LGVVSSLGKWLYDAASSTKQSIIFLGSACCALTDVLLH 129 Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 + + ++ G V ++ LI F+ G +IA + A FGA IF ++ + I Sbjct: 130 PSQIR--FGEILSVSDEAGSRAVGIICLIGFLMGVIIAFETALVAQIFGAVIFVVNGIGI 187 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 RE+G L+TA++ AGRSGSA A++G+ K+NEE++A+ T GL + L+ PR+ A + Sbjct: 188 AMTRELGPLMTAILFAGRSGSAFAAQLGTQKVNEELNALTTFGLSPMYFLVVPRLIASSL 247 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 +PLL++ A I+G +V+ YDI + F+ + + T+ +I GL+KA I Sbjct: 248 VVPLLSVFATILGILGGGLVM-AMYDITYTQFYVQLLKSVTVTDIVFGLVKAVIFGFVIA 306 Query: 326 IVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 ++ + G G + ++G T VV+SI +++ID A+ +GI Sbjct: 307 LIGCQCGMNTGAGAAAVGSSTTKSVVKSIIWIVVIDGAAALLTNRLGI 354 >gi|149200416|ref|ZP_01877432.1| ABC-type transport system, permease component [Lentisphaera araneosa HTCC2155] gi|149136485|gb|EDM24922.1| ABC-type transport system, permease component [Lentisphaera araneosa HTCC2155] Length = 265 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 2/265 (0%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 KNL G+ V F +S + +G V + +K K S + M G Sbjct: 1 MKNLVSSFGRNFVGFFQESKNILAFIGEVTEELIFGIRNPHKIK--WKSTLYYMDGCGRE 58 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +V LI F+ G ++ Q A Q+ QFG +I+ +L+ + ++E+G L+ A++ GR+GS Sbjct: 59 ATGIVALICFLMGLILGFQSAVQMKQFGTDIYVANLVGLSIVKELGPLMVAMIATGRAGS 118 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A AE+G+M++NEEIDA+ TMG R LI P++ A+++ +P+LT++ + I+G V Sbjct: 119 AFAAELGTMRVNEEIDALTTMGFVPPRFLIIPKLIAMMVVMPILTLIGDLLGILGGFFVG 178 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 +PF + ++ ++ + KA A I +V G + +GK Sbjct: 179 VVQLKLPFIAYLNQTIKAIHYLDVMESMAKAFAFAIIISMVGCYRGMNSSSDAQGVGKAA 238 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 T+ VV I ++I+ D+L I + + Sbjct: 239 TSSVVSGIFLIIVADTLMTIIFTQL 263 >gi|239947145|ref|ZP_04698898.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921421|gb|EER21445.1| membrane protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 261 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 130/254 (51%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G +S + +L +IRQ+ ++G + VV + +F +G Sbjct: 8 SVGKRTIKFAQSVGSFSLFIFAAVSSIIRPPLYLSLIIRQLLFIGFHSLSVVAMTTFFSG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEI +M++ E Sbjct: 68 AVLALQSYTGFSRFSAESSIATVVILSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V D A + + Sbjct: 128 QVDALYTLSTDPIKYLVFPRVIAAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILI 247 Query: 360 IDSLFAIFYFAIGI 373 + L +F + I Sbjct: 248 SNYLITELFFKVQI 261 >gi|238650558|ref|YP_002916410.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic] gi|238624656|gb|ACR47362.1| ABC transporter permease protein [Rickettsia peacockii str. Rustic] Length = 259 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 130/252 (51%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + A +G + +S + +L +IRQ+ ++G +PVV + +F +G Sbjct: 8 SVGKRTVKFAQSVGSFSLFSFAAVSSIIRPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q S+F AE ++ + RE+G +L +M+AGR G++I AEI +M++ E Sbjct: 68 AVLALQSYIGFSRFSAESSIATVVVLSLTRELGPVLAGLMVAGRVGASIAAEIATMRVTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D ++ L+ PR+ II++P L ++ + ++G +V D A + + Sbjct: 128 QVDALYTLSTDPIKYLVFPRVITAIITMPCLVLIGDIIGVMGGYLVGVYKLDFNSAAYLT 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +GL+KA I I++ G+ G + +G+ T+ VV + +++I Sbjct: 188 STFQYLEPIDVISGLVKAGVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNASILILI 247 Query: 360 IDSLFAIFYFAI 371 + L +F + Sbjct: 248 SNYLITELFFKV 259 >gi|226939556|ref|YP_002794629.1| ABC transport system permease protein [Laribacter hongkongensis HLHK9] gi|226714482|gb|ACO73620.1| putative ABC transport system permease protein [Laribacter hongkongensis HLHK9] Length = 371 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 10/360 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G + + I + + A+ Q+ +D SA+T++D+ G L+ + Sbjct: 16 LRLEGPLTTHSVGSIWAEALAALAAQPQTP-LTLDASAVTQLDSAGLVLLHRLLHDPRPA 74 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 +S + L+ + + IG + ++ Sbjct: 75 SAPVALSGLAAEYQPLLERIRTASL------TPPASPPPLSPVERIGAATLSGLHTGRDS 128 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G S + +G ++ M G +P+V+LI F+ G ++A Q Sbjct: 129 VVWTGASASALWRALCRPARLEG--ARVLDIMASAGTQALPIVLLIGFLMGTILAFQMGL 186 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 FGA + ++ + I LRE+G L+TA++ AGRSG+A AE+G+ K+NEEI A+ T G Sbjct: 187 VAQGFGAGLLVVNGIGIAMLRELGPLMTAIVFAGRSGAAFAAELGTQKVNEEIYALHTFG 246 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D V L+ PR+ A ++ LPLLT+LA+ ++G ++V+ + + F+ + +T +L Sbjct: 247 IDPVAFLVLPRLVAAVLVLPLLTVLADVIGLLGGALVMQAF-SVTPMQFYHQTLATVSLT 305 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +++ GL K+ I + ++G + G ++G T VV S+ +++ID LFA Sbjct: 306 DLYFGLGKSMVFGLFIAQIGCRQGLSAGQGPTAVGVAATRAVVSSLIWIVVIDGLFAALL 365 >gi|51473253|ref|YP_067010.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington] gi|81390296|sp|Q68XW4|Y041_RICTY RecName: Full=Probable ABC transporter permease protein RT0041 gi|51459565|gb|AAU03528.1| ABC transporter permease protein [Rickettsia typhi str. Wilmington] Length = 259 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 131/251 (52%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + A +G+ + +S K +L ++RQ+ ++G +PVV + +F +GA Sbjct: 9 VGKHTIKFAQSVGIFALFSFIAISSIIKPPLYLSLIMRQLLFIGFHSLPVVAMTTFFSGA 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q S+F AE ++ + RE+G +L +++AGR G++I AEI +MK+ E+ Sbjct: 69 VLALQSYTGFSRFSAENSIATVVVLSLTRELGPVLAGLIVAGRVGASIAAEIATMKVTEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ T+ D ++ L+ PR+ A II++P L ++ + ++G +V + + + Sbjct: 129 VDALYTLSTDPIKYLVCPRVIAAIITMPCLVLIGDVIGVMGGYLVGIYKLNFNSTAYLTS 188 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L ++ +GL+KA I I++ G+ G + +G+ T+ VV S +++I Sbjct: 189 TFQYLELIDVISGLVKATVFGFIISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILIS 248 Query: 361 DSLFAIFYFAI 371 + L F + Sbjct: 249 NYLITELLFKV 259 >gi|329113573|ref|ZP_08242353.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326697095|gb|EGE48756.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 385 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 79/375 (21%), Positives = 155/375 (41%), Gaps = 16/375 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ G W A + ++ +++ D+ + Sbjct: 24 TADGVC-LNVEGAWTVQAGG--ATPFPQDKLPIEPGHTLHINTTSLKNWDSAFVAFLWDV 80 Query: 62 ME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKI 118 + K Q + ++L +L+ + + + + +G Sbjct: 81 KQAASKAQLHFDEQNLPAPAQRLLALLPDAPAEPAQPPRNNE--------GIFARVGDMT 132 Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + ++ + + + + + L+ ++ G + +V +++F+ Sbjct: 133 LNGLTETGTVSELALDTAKGAAQAVRGKSAMRM--KDLLLDIWNAGPDALLIVGIVNFLV 190 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A G +L +F AEI+ DL+ I REI ++TA+++AGR+G A A I +M N Sbjct: 191 GAILAFVGLVELRKFAAEIYVTDLVGIACAREISAIMTAIIMAGRTGGAYAARISTMLGN 250 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA++ G+ ++ P I +L + +PLL + AI G V D+ ++ Sbjct: 251 EEIDALQVFGIPISSYILLPSIVSLALMMPLLYLYGTIVAIFGGFAVSMSMMDVSPIGYW 310 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 L G IK+ F A I + A + G G + +G T VV I +I Sbjct: 311 ISTFDGVELKEFIFGFIKSFFFASFIALAACRVGLKAGRSAADVGIAATRAVVIGIVGII 370 Query: 359 IIDSLFAIFYFAIGI 373 +D++FA+ A+GI Sbjct: 371 AMDAIFAVIANALGI 385 >gi|326405508|ref|YP_004285590.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325052370|dbj|BAJ82708.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 362 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 19/368 (5%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 V G + ++E + + +DLS IDT GA L++ Sbjct: 13 DGPVIALTGPLTAAALTEAWPRAIAVARAA--QGVMTLDLSRAARIDTSGAALLLALERG 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + G+ + QG++ E L + + + P R+ + Sbjct: 71 HDGETRWQGLTPAAEGLIARLRAALPETGAPPPPPRTVRGPGP--------------LRT 116 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G I T A +G + R G +P+VI++ F+ G ++A Sbjct: 117 LGVRIAFFGETILATTGLPARRRFLRG--GNFFRIAERAGAQALPLVIMLGFLIGMILAF 174 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A + QFGA+I+ L+S+ RE+G LL AV++AGR+GSA AE+G+M +NEE+ A+ Sbjct: 175 QSAIPMRQFGADIYVAALVSLSLFRELGPLLAAVILAGRTGSAFAAELGTMMVNEEVAAL 234 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMG+D +L+ PR+ A ++ +P L + + S ++G V+ P + ++ Sbjct: 235 TTMGIDPGTMLVIPRMAAAMLVMPALALGIDVSGVLGMGFVM-GILGFPPSAIVAQMQMA 293 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A+ ++ GL+K+ A+G++ + G G ++G+ T+ VV I I+ID LF Sbjct: 294 ASPHDVLLGLMKSVVFGAAVGLIGCRAGLTAGGGPRAVGEAATSAVVGGIVATILIDGLF 353 Query: 365 AIFYFAIG 372 A+ + +G Sbjct: 354 AVVLYRLG 361 >gi|163797504|ref|ZP_02191455.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199] gi|159177253|gb|EDP61812.1| hypothetical protein BAL199_23507 [alpha proteobacterium BAL199] Length = 282 Score = 205 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 114/249 (45%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + S LG + G + + + RQ +G +PVV L + +G V Sbjct: 33 GSTFLSFLTALGRLALFAGSAVGHCVRPPIYPRLIGRQFLEIGYYSLPVVGLTTLFSGMV 92 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q ++F AE ++ + RE+ +L +M+AGR G+A+ AEIG+M++ E+I Sbjct: 93 LALQSYSGFARFSAESAVATVVVLSITRELAPVLAGLMVAGRVGAAMAAEIGTMRVTEQI 152 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + + LI+PR+ A +SLP+L ++ + + G +V + Sbjct: 153 DALTTLSTNPFKYLIAPRLIAATLSLPILVLIGDVIGVFGGYVVGVYKLGFNAGNYIQST 212 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +GL+KA + ++ G+ + +G T VV + +++I + Sbjct: 213 VQFLEQIDVISGLVKAGVFGFIVALMGCYHGYHSRGGAQGVGAATTNAVVTASIMILIAN 272 Query: 362 SLFAIFYFA 370 +F Sbjct: 273 YAITELFFG 281 >gi|209964880|ref|YP_002297795.1| ABC transporter permease protein, putative [Rhodospirillum centenum SW] gi|209958346|gb|ACI98982.1| ABC transporter permease protein, putative [Rhodospirillum centenum SW] Length = 256 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 123/253 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + T + + +L + RQM +G +PVV L + Sbjct: 4 IAGIGRATLVFMEATGRLALFTAIALSHCLRPPFYLRHIGRQMIDIGYYSLPVVGLTALF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F AE ++ + RE+G +L +M+AGR G+A+ AE+G+M++ Sbjct: 64 TGMVLALQSYSGFSRFEAESAIATVVVLSITRELGPVLAGLMVAGRIGAAMAAELGTMRV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+ T+ + + L+ PR+ A + LPLL ++A+ + G +V + + Sbjct: 124 TEQVDALTTLSTNPFKYLVVPRLLAGTLMLPLLVLVADIIGVFGGFLVGVYRLNFNAGGY 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + ++ +GL+KA AI ++ G+ + +G T VV + ++ Sbjct: 184 ITSTWKYLEVMDVVSGLVKAGAFGFAISLMGCYHGYHSRGGAQGVGAATTNAVVSASILI 243 Query: 358 IIIDSLFAIFYFA 370 ++++ L +F+ Sbjct: 244 LVLNYLLTGIFFS 256 >gi|302036233|ref|YP_003796555.1| putative toluene efflux ABC transporter ATP-binding protein [Candidatus Nitrospira defluvii] gi|300604297|emb|CBK40629.1| ABC transporter, membrane component, putative ATP-dependent toluene efflux transporter [Candidatus Nitrospira defluvii] Length = 255 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 127/254 (50%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I + + +G ++ A + + +++Q+ ++G VV+L + Sbjct: 2 EGIARIGRYTIDLTEQMGRMMLFVLSSFAWLTRPPFRVYQIVKQLNFIGYKSTFVVVLTA 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+A QG + L +FG+E +++ +RE+G +L A+M+ R+GSA+ AEIG M Sbjct: 62 VFTGMVLALQGHYTLRKFGSEAVLGSAVALSIIRELGPVLAALMVTARAGSAMTAEIGIM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I E+IDA+ TM ++ ++ LI P++ A +I++PLL L + I G +V + + Sbjct: 122 RITEQIDALDTMAINPLQYLIGPKLVASLIAVPLLVALFDVVGIYGGYVVGVQLLNGNEG 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++S S +++ G++K+ I V +GF + LG T VV S Sbjct: 182 AYWSSIESAVEWKDVYGGILKSISFGLLISWVCCYKGFHTKHSAEGLGTATTEAVVLSAV 241 Query: 356 IVIIIDSLFAIFYF 369 ++++ D Sbjct: 242 LILVWDYFLTSVLL 255 >gi|258593363|emb|CBE69702.1| toluene transporter subunit: membrane component of ABC superfamily [NC10 bacterium 'Dutch sediment'] Length = 247 Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 136/244 (55%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG + T + + LIRQ+ ++GV + + + + TG V+A Q A Sbjct: 1 MLELLGGLSQLTYDTVCCACTPPFNPRELIRQVDHIGVKSISIAGVAAAFTGLVLALQTA 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + LS+FGA+ + ++S+ +RE+G +LTA+++ GR GS I AE+GSMK+ E+IDA+R M Sbjct: 61 YGLSRFGAKAYVGIIVSLSMVRELGPVLTALLVGGRVGSGITAELGSMKVTEQIDAMRAM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G + V+ L+ PR+ + ++ LPLLT++A+ I+G ++ + + + +++ TL Sbjct: 121 GANPVKKLVVPRVLSTMLVLPLLTVMADILGILGGMVISKYEFQVDYHFYYNTVTRNLTL 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 A+I +GL K I IV +G A + LGK T VV S VII D F Sbjct: 181 ADIVSGLGKTVVFGFIIAIVGCYKGLATVGGTEGLGKATTATVVTSAIAVIISDFFLTKF 240 Query: 368 YFAI 371 ++ + Sbjct: 241 FWWL 244 >gi|325294995|ref|YP_004281509.1| hypothetical protein Dester_0809 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065443|gb|ADY73450.1| protein of unknown function DUF140 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 260 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 130/258 (50%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + + G + + + +++ + Q+ +G +PV+ + S Sbjct: 3 KLLEAIGRVTINFLEFWGSWLIISVKAIVLAFRKPIRFKHYLYQLASIGTGSLPVIAITS 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG VIA + +F AE +++I RE+G +LTA++I RSGSA+ AEIG+M Sbjct: 63 LFTGGVIALETYEAFHRFNAEYMIGGVVAISMARELGPVLTALLITARSGSAMAAEIGTM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+R M ++ ++ LI+PR++ +I++ LLTI+++ IG IV ++I Sbjct: 123 KVTEQIDALRMMAVNPIKYLITPRVYTSVIAVTLLTIISDIVGYIGGYIVSVVVFNINKT 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ + A + +++ GLIKA I ++ G+ + +G+ T VV S Sbjct: 183 LYIRYTQNLAEMNDVYHGLIKAAIFGFLIATISCLYGYFTKGGAKGVGESTTKAVVVSSI 242 Query: 356 IVIIIDSLFAIFYFAIGI 373 ++I D L + Sbjct: 243 SILIFDYLITFILRFFDL 260 >gi|114769304|ref|ZP_01446930.1| ABC transporter, inner membrane subunit [alpha proteobacterium HTCC2255] gi|114550221|gb|EAU53102.1| ABC transporter, inner membrane subunit [alpha proteobacterium HTCC2255] Length = 259 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 120/254 (47%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + + +G ++ + + ++ Q+ +G +PVV L + Sbjct: 6 KLLRSIGSSVLAFCSSVGRIVIFALNAILHLVRPPFYGREVLSQLMQIGFYSLPVVGLTA 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TGA +A Q +F AE +++I +RE+G +L +M+AGR S+I AE+G+M Sbjct: 66 LFTGAALALQIYSGGVRFSAESVVPSIVAIGMVRELGPVLGGLMVAGRVSSSIAAELGTM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E++DA+ T+ D ++ L++PR+ A I++P+L + + I+G +V Sbjct: 126 RVTEQLDALVTLSTDPMKYLVAPRVLAATIAMPILVAVGDTIGILGGYLVGTGRLGFNSN 185 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + L +I +GL KA I ++ G+ G + +GK VV + Sbjct: 186 NYLQNTVDFMELEDITSGLAKAAVFGFIIALMGCYHGYNSGRGAQGVGKATINAVVSASV 245 Query: 356 IVIIIDSLFAIFYF 369 +++ + + +F Sbjct: 246 MILAANYVLTEAFF 259 >gi|118579001|ref|YP_900251.1| hypothetical protein Ppro_0562 [Pelobacter propionicus DSM 2379] gi|118501711|gb|ABK98193.1| protein of unknown function DUF140 [Pelobacter propionicus DSM 2379] Length = 256 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 128/252 (50%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + LG + + + G + +++Q+ ++G + V+ L + Sbjct: 5 IQAIGHSTIGSIRALGRMGWFLVHSFITMVRTPGNPVHVLKQLSFIGAKSLFVIFLTAAF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG + L++FG+E +++ +RE+G +LTA+M+ GR+GSAI AEIG M+I Sbjct: 65 TGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLTALMVTGRAGSAIAAEIGIMRI 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ TM LD + LI+P++ A +I+LPLL + + I G +V K + + Sbjct: 125 TEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIFDTIGIYGGWLVGVKLLGVNPGAY 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 FS + ++++G K+ I + +G+ G + + K T VV + ++ Sbjct: 185 FSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKATTEAVVLTSVLI 244 Query: 358 IIIDSLFAIFYF 369 ++ D Sbjct: 245 LVWDYFLTSVLL 256 >gi|83311193|ref|YP_421457.1| ABC-type transport system involved in resistance to organic solvents [Magnetospirillum magneticum AMB-1] gi|82946034|dbj|BAE50898.1| ABC-type transport system involved in resistance to organic solvents [Magnetospirillum magneticum AMB-1] Length = 258 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 119/250 (47%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + +G + + T + + + + ++R+ +G +PVV L + TG Sbjct: 8 VGRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFIEIGYFSLPVVGLTAVFTGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q S+F AE ++ + RE+ +L +M+AGR G+++ AEIG+M++ E+ Sbjct: 68 VLALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRVTEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T+ + + L++PRI A + LP L ++A+ + G IV A + +R Sbjct: 128 IDALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVGVYKLGFNSATYIAR 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ +GL KA I ++ G+ + +G T VV + ++++ Sbjct: 188 TWEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSAAIMILVF 247 Query: 361 DSLFAIFYFA 370 + + +F Sbjct: 248 NYVITAMFFG 257 >gi|328953206|ref|YP_004370540.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328453530|gb|AEB09359.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 256 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 137/263 (52%), Gaps = 7/263 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 K+L +G+ + FI ++ G + + + +L++Q+Y +GV Sbjct: 1 MKDLLRTLGRATIDFIQEA-------GRMQLFLFQTLGLFFLPPYKPFNLVKQVYVIGVR 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +++L + TG V+ QG + L +FGAE +++ +RE+G +LTA+M+ GR+GS Sbjct: 54 SSSIILLTAMFTGMVLGLQGYYTLRKFGAESALGSAVALSLIRELGPVLTALMVTGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG M+I E++DA+ TM ++ ++ ++ P++ A +I++PLLT +F I+G +V Sbjct: 114 AITAEIGIMRITEQLDALDTMAINPMQYVVMPKVIAGLIAVPLLTAFFDFVGIVGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + +FS + ++ G +K+ + +VA +G+ + + + Sbjct: 174 VVMLGVSSGSYFSGMIQSVETLDVNGGFVKSIVFGLTVTLVACYKGYFTSHGAEGVSQST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV + +++ D + F+ Sbjct: 234 TEAVVLAAILILGWDYVLTSFFM 256 >gi|108762257|ref|YP_631903.1| putative ABC transporter permease [Myxococcus xanthus DK 1622] gi|108466137|gb|ABF91322.1| putative ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 271 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 125/254 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + +F LG +I+ + S + L++L Q+ +VGV + +V L Sbjct: 18 QAVTRFGQGLIDIVSTLGGIITMGLDVFRWSVRRPFRLVNLFAQLDFVGVGSIFIVSLTG 77 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V A Q + F AE +++ RE+ + +A+M+ R+GSA+ E+G+M Sbjct: 78 TFTGMVFALQTSTAFQLFDAESLVGPTVALTLTRELAAVFSALMVTMRAGSAMCTELGTM 137 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E++DA+ TM ++ V+ L+ PR+ A + +P LT+L N + GA +V I Sbjct: 138 RVTEQVDALETMAVNPVQYLLVPRVLAGLFMVPALTMLFNTMGMGGAYVVAVGGLGISPG 197 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F SR +IF GL+K ++ ++ +GF + +G+ T +V S Sbjct: 198 TFLSRTQQWLAPEDIFQGLLKGAVFGLSVSLICCFKGFNASGGAKGVGQATTEAMVASAL 257 Query: 356 IVIIIDSLFAIFYF 369 + I+D + I +F Sbjct: 258 SIFILDFILGILFF 271 >gi|15223672|ref|NP_173410.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|42571555|ref|NP_973868.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|42571557|ref|NP_973869.1| TGD1 (TRIGALACTOSYLDIACYLGLYCEROL 1); lipid transporter [Arabidopsis thaliana] gi|75153743|sp|Q8L4R0|TGD1_ARATH RecName: Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic; AltName: Full=ABC transporter I family member 14; Short=ABC transporter ABCI.14; Short=AtABCI14; Flags: Precursor gi|20465620|gb|AAM20141.1| unknown protein [Arabidopsis thaliana] gi|21281062|gb|AAM45069.1| unknown protein [Arabidopsis thaliana] gi|45680900|gb|AAS75319.1| permease-like protein [Arabidopsis thaliana] gi|222424205|dbj|BAH20061.1| AT1G19800 [Arabidopsis thaliana] gi|332191778|gb|AEE29899.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] gi|332191779|gb|AEE29900.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] gi|332191780|gb|AEE29901.1| trigalactosyldiacylglycerol 1 [Arabidopsis thaliana] Length = 350 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 113/232 (48%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + F+F Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340 >gi|115379773|ref|ZP_01466845.1| ABC-type transport system involved in resistance to organic solvents [Stigmatella aurantiaca DW4/3-1] gi|310821468|ref|YP_003953826.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|115363220|gb|EAU62383.1| ABC-type transport system involved in resistance to organic solvents [Stigmatella aurantiaca DW4/3-1] gi|309394540|gb|ADO71999.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 272 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 120/252 (47%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I F + + +G V + ++K Q+ +VGV + +V L Sbjct: 18 QAIENFGKGTIAVVSDVGGVAYLGFQVLRWAFKRPFRPQIFFSQLDFVGVGSIFIVALTG 77 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V AQQ + + F AE +++ RE+ + +A+M+ R+GS++ E+G+M Sbjct: 78 LFTGMVFAQQVSTAFALFDAESLVGPTVALTLSRELAPVFSALMVTMRAGSSMCTELGTM 137 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E++DA+ TM ++ V+ L+ PR+ + +I P+LT+L S + GA ++ + Sbjct: 138 RVTEQVDALETMAVNPVQYLLVPRVLSGLIMGPVLTMLFFTSGMSGAYMISVFVQNTSAG 197 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F SR +++ G +K I ++ +G+ + +G+ T +V S Sbjct: 198 TFISRTQQWMEPLDLYEGTLKGAVFGLTITLICCYKGYNASGGAKGVGQATTEAMVSSAL 257 Query: 356 IVIIIDSLFAIF 367 + I+D + + Sbjct: 258 AIFILDFIIGVL 269 >gi|291532196|emb|CBL05309.1| conserved hypothetical integral membrane protein [Megamonas hypermegale ART12/1] Length = 256 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG+ ++ + ++G I+ ++ + + +QM ++GV Sbjct: 2 IIRFFEKIGRFVIGHLETLGQFTILIGNTIAQL--------RYPPRMRHVFQQMSHLGVD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++ L TG VI Q A + + GA+ +++I RE+G +L V+ AGR G+ Sbjct: 54 TLPIITLTMLFTGMVITLQTATEFIRLGAQSTVGGIVTIAVGRELGPVLAGVVTAGRVGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEI +MK+ E+IDA++ M + + L+ PR+ A + LP+L + + IG +V Sbjct: 114 AITAEISTMKVTEQIDALKVMATNPIGYLVVPRLIACMFMLPILVVFGDVIGSIGGWMVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 YYDI ++ + + +I GL+K+ I IV G + +GK Sbjct: 174 E-YYDINIYMYLHSIDTFVDVHDITGGLLKSIVFGAIIAIVGCYYGLNAQNGAEGVGKAT 232 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV SI ++ + L ++ + Sbjct: 233 TRSVVISIIVIFFSNCLLSMLLY 255 >gi|283853085|ref|ZP_06370341.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283571552|gb|EFC19556.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 274 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 5/273 (1%) Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 N+ + I S LG + G+ +++Q+Y Sbjct: 2 PRPNTMTQALALLLSPIAALGRAVLSLVAELGGLCIFMGKGLWRIVFPSPAWRKIVQQVY 61 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 ++GV V V++LI TG V+ QG + L +FG+E +++ +RE+G +LTA+MI Sbjct: 62 FIGVKSVFVIVLIGLFTGMVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMIT 121 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GR+GS++ AEIG M+I+E+IDA+ TMG++ +R LI+PR+ A ++ PLLT + + I G Sbjct: 122 GRAGSSMAAEIGIMRISEQIDALSTMGINPLRFLIAPRLAASLVCFPLLTAIFDVVGIGG 181 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----G 336 + I V+F R ST L ++ G +K+ A + + EG+ G Sbjct: 182 GYLTGVVLLGINPGVYFDRIDSTVELGDVTGGFVKSLVFALLVAAICCFEGYFTHTRREG 241 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + T+ VV S +++ D + F Sbjct: 242 FGAKGVSLATTSAVVLSCITILVADYVLTSFLL 274 >gi|126663828|ref|ZP_01734823.1| ABC transporter, permease [Flavobacteria bacterium BAL38] gi|126624092|gb|EAZ94785.1| ABC transporter, permease [Flavobacteria bacterium BAL38] Length = 261 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 3/255 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 I + +G + G F +K +RQ Y++G + +V + F+ G Sbjct: 7 NIIKVIKAFLIEIGEISYFAGRFFKEFWKPPYEFKEFLRQCYFIGNRSLFLVGVTGFIIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q L +FGA + ++S+ +REIG ++TA++ AGR GS I AE+GSMK+ E Sbjct: 67 LVFTLQSRPTLQEFGAVSWMASMVSVSIIREIGPIITALICAGRIGSGIGAELGSMKVTE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ G + + L+ RI A + LPLL I + AI G+ +V ++ F ++F+ Sbjct: 127 QIDAMEVSGTNPFKYLVITRILATSLMLPLLVIFGDVLAIYGSYLVENVKDNVSFQLYFN 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + +++ +K F AIG++ +G+ + +GK VV + ++ + Sbjct: 187 QVFNILEFSDLIPATLKTFFFGFAIGLIGCYKGYYCKKGTAGVGKAANEAVVYTSMLLFV 246 Query: 360 IDSL---FAIFYFAI 371 ID + ++ + Sbjct: 247 IDFIAVFVTNIFYDM 261 >gi|23014157|ref|ZP_00053989.1| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Magnetospirillum magnetotacticum MS-1] Length = 258 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 119/249 (47%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G + + T + + + + ++R+ +G +PVV L + TG V Sbjct: 9 GRVFLAFLAHVGRLSAFTAMAVSHTVRPPFYPRLILREFVEIGYFSLPVVGLTAVFTGMV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q S+F AE ++ + RE+ +L +M+AGR G+++ AEIG+M++ E+I Sbjct: 69 LALQSYSGFSRFAAEGAVATVVVLSVTRELAPVLAGLMVAGRIGASMAAEIGTMRVTEQI 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + + L++PRI A + LP L ++A+ + G IV A + +R Sbjct: 129 DALTTLSTNPFKYLVAPRILAGTLMLPFLVLIADIIGVFGGYIVGVYKLGFNSATYIART 188 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +GL KA I ++ G+ + +G T VV + ++++ + Sbjct: 189 WEFLEPLDVISGLTKAAVFGFLITLMGCYNGYYSKGGAQGVGAATTNAVVSAAIMILVFN 248 Query: 362 SLFAIFYFA 370 + +F Sbjct: 249 YIITAMFFG 257 >gi|291287315|ref|YP_003504131.1| hypothetical protein Dacet_1405 [Denitrovibrio acetiphilus DSM 12809] gi|290884475|gb|ADD68175.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM 12809] Length = 256 Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 128/249 (51%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F N + G + + + L LI+Q+ ++G + + V+IL TG Sbjct: 8 FGNPLVRLINATGSMSLMFFDTIRLIFVPPFRLRLLIKQIEFIGANSLSVIILTGSFTGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V A Q +FGAE ++++ RE+G +L+A+M+A R+GSAI AEIG+MK+ E+ Sbjct: 68 VFAFQSYIGFHKFGAEQIVGTVVALGMARELGPVLSAIMVAARAGSAITAEIGTMKVTEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +DA+ + +D V+ L PRI A +I +P+L +A F ++G +V I ++ + Sbjct: 128 VDALNALAVDPVQYLFVPRILAGLIVMPMLNAIAVFCGMVGGFLVSITVLGINKTLYLNY 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++ F+G++KA + +V +G+ + +GK T VV + ++++ Sbjct: 188 MYQYIEFSDFFSGMVKAFVFGGIVTLVGCYKGYMTTGGAEGVGKSTTESVVLACILILVF 247 Query: 361 DSLFAIFYF 369 D + F F Sbjct: 248 DYILTAFMF 256 >gi|162456584|ref|YP_001618951.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161167166|emb|CAN98471.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 266 Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 121/252 (48%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + +G +++ T + + + M ++G V +V L +G Sbjct: 15 RALEPVLAFLDNIGNIVTLTFQTIVWLVRPPFRPAQFLAAMDFMGAQSVFIVGLTGVFSG 74 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ Q ++ L F AE L+++ RE+ + +A+M+ R+GSA+ AE+G+M++ E Sbjct: 75 MVVTLQTSYALRAFSAEGRVGGLVAVSLARELAPVFSAIMVTARAGSAMAAELGNMRVTE 134 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDAI TMG+ V+ L+SPR++A + LPLL IL + G+ +V + FF Sbjct: 135 QIDAIATMGVSPVQYLLSPRLFAATVMLPLLCILYTSVGMCGSYLVAVLWLGGDEGAFFQ 194 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 A +I GLIKA + ++ + GF + +G T VV+S V++ Sbjct: 195 SIRDFALPKDISMGLIKACVFGFIVSSISCRHGFYASGGARGVGVATTRAVVESCVTVLV 254 Query: 360 IDSLFAIFYFAI 371 + + + Sbjct: 255 TNYILTQLLLDM 266 >gi|319789984|ref|YP_004151617.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1] gi|317114486|gb|ADU96976.1| protein of unknown function DUF140 [Thermovibrio ammonificans HB-1] Length = 260 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 127/262 (48%), Gaps = 7/262 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G+ ++ F G + + ++K L I + +G Sbjct: 1 MVKLLEAVGRWVIAF-------LEFWGRWFLLSAKAVTLAFKPPLRLKRFIYYLATIGSD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV+ + S TG VIA + +F AE +++I RE+ +L+A+++ RSGS Sbjct: 54 SIPVIAVTSLFTGGVIALETYNAFHRFNAEFMIGAVVAISMARELSPVLSALLVTARSGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG+M++ E+IDA+ M ++ ++ LI+PRI+A ISL LT++A+ IG +V Sbjct: 114 AMAAEIGTMRVTEQIDALEMMAVNPIKFLITPRIYATTISLVFLTVIADIIGYIGGYLVS 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + ++ + A + ++F GLIKA + ++ G+ + +G+ Sbjct: 174 VHIFGVNKTLYLRYTQNFAHMEDVFHGLIKAAVFGFLLSTISCLYGYYTRGGAKGVGEST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFY 368 T VV S ++I D L Sbjct: 234 TKAVVSSSIAILIFDYLITYLL 255 >gi|312898371|ref|ZP_07757761.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620290|gb|EFQ03860.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 264 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 ++L IG+ + + + + G I + I QM ++GV Sbjct: 11 LQHLLERIGRFTLHIFEEVGVISVLFGQTIKQM---------PRIRRDLTINQMAHLGVD 61 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 P+V L G V+ Q L ++GA+ +MS+ RE+G +LT V++AGR G+ Sbjct: 62 SFPIVALTMLFAGMVMTLQIVDILMRYGAQSTLGGIMSVAMGRELGPILTGVVVAGRVGA 121 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG+MK+ E+IDA+R M D V L+ PR A + +PLLT G V Sbjct: 122 AMTAEIGTMKVTEQIDALRCMATDPVAYLVVPRFVACVFMVPLLTFFGYLIGTGGGYCVA 181 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + ++++ GLIKA I +VA EG + +G+ Sbjct: 182 VFSAGLTDYTYMHSIEFFTEISDVLFGLIKAGVFGGIIALVACFEGMHAKSGAEGVGQAT 241 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV SI + I + + ++ + Sbjct: 242 TKSVVTSIIFIFITNYILSVILY 264 >gi|154253915|ref|YP_001414739.1| hypothetical protein Plav_3483 [Parvibaculum lavamentivorans DS-1] gi|154157865|gb|ABS65082.1| protein of unknown function DUF140 [Parvibaculum lavamentivorans DS-1] Length = 257 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 120/249 (48%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G + + + F +QM +G +PVV L +F TG Sbjct: 8 GRVVLALLGEIGRLSLFVWLSVSHILRPPFFWRLTAQQMLRIGYFSLPVVALTAFFTGGA 67 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q + + F +E ++++ RE+G +L +M+AGR +AI AE+G+M++ E+I Sbjct: 68 LALQIYYGGNSFNSESIVATIVALGITRELGPVLGGLMVAGRVSAAIAAELGTMRVTEQI 127 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + + L+ PR+ A +I+LPLL ++A+ I+G +V D V+ Sbjct: 128 DALTTLSTNPHKYLVVPRVVAAVITLPLLVLVADIIGIMGGYVVGTASLDFNGGVYIKNT 187 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L ++ +GLIKA I ++ GF + +G+ T VV + +++ + Sbjct: 188 ADFLKLDDVTSGLIKAAVFGFIIAVMGCFHGFNSKGGAQGVGRATTNAVVTASILILAAN 247 Query: 362 SLFAIFYFA 370 + FA Sbjct: 248 YVMTSLLFA 256 >gi|32474659|ref|NP_867653.1| ABC transporter permease [Rhodopirellula baltica SH 1] gi|32445198|emb|CAD75200.1| probable permease of ABC transporter [Rhodopirellula baltica SH 1] Length = 296 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 119/256 (46%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I+++ +G + T + + +++ Y VGV +PVV L Sbjct: 29 RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A Q +Q G E +++ +RE+G +L A M+AGR G A+ A +G+M Sbjct: 89 SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ TMG D + L+ PR A ++ +P LTI+A+F I+G I A Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++F G+ K+ F I I++ GF + +GK T V S Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268 Query: 356 IVIIIDSLFAIFYFAI 371 +++ ID I + Sbjct: 269 MILAIDLFLNIVLDWV 284 >gi|83593780|ref|YP_427532.1| hypothetical protein Rru_A2445 [Rhodospirillum rubrum ATCC 11170] gi|83576694|gb|ABC23245.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 389 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 82/372 (22%), Positives = 161/372 (43%), Gaps = 4/372 (1%) Query: 3 ENGITVFRFAGNWKSPEIS-EIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 E +V +G+W + + A ++ + S D+S + D+ Sbjct: 21 EGADSVVVLSGDWLASQTGLRSAVEITRLLGDGAVKGSLRYDVSGLGRWDSALVAF-ARM 79 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 M G+ + + L + N+ + + ++ +G + F Sbjct: 80 MRAAAGEGANKRFTLDESTLPEAALRLLKLAETNEPLPSASGDKAAASVVARVGHGTLGF 139 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + A ++G + + ++ M G + + +V +++ + GA+ Sbjct: 140 GAELGAIATLVGESVFGVARGLGGRAFTRSV--DILHLMREAGANALVIVAIVNGLIGAI 197 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA QL +FGA IF DL+ I +RE+ ++TA+++AGR+G A A + +M+ NEEI Sbjct: 198 LAFVGAVQLQRFGAGIFVADLVGIAMVREMAAVMTAIVMAGRTGGAYAAHLATMQGNEEI 257 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA++ +G+ L+ PR+ AL+ +PLL + ++G +V D+ F + Sbjct: 258 DALKVLGIPAYDFLVLPRVVALVTMMPLLYLYGCAIGLLGGFVVSLAILDMSATTFLDQI 317 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 GL+K+ + + G G + +G+ T+ VV I VI +D Sbjct: 318 QGAIAGRQFAIGLVKSVAFGFLVALAGCHIGLRAGRSAADVGRAATSAVVVGIVGVIALD 377 Query: 362 SLFAIFYFAIGI 373 ++FA+ +GI Sbjct: 378 AVFAVCADRLGI 389 >gi|195952743|ref|YP_002121033.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] gi|195932355|gb|ACG57055.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] Length = 246 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 123/243 (50%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG +K + + + ++ Y+G VPVV+ S TG V+A Sbjct: 1 MVEFINALGEAFYIFLTALLHIFKDRPKIRHFVDRVIYIGADTVPVVVTTSLFTGGVLAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L +F +E L+++ RE+G +LT++M+ R GSAI A IG+MK+ E+IDA+ Sbjct: 61 QTYSTLHKFNSEYLIGALVALSMGRELGPVLTSLMVVARVGSAITASIGTMKVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+ ++ + SP ++A ++ LPLLTIL++ S IIG +V + + +++ + Sbjct: 121 ETLAINPYAYITSPILFACMVDLPLLTILSDISGIIGGYLVSTIIFHVNGHMYWDKTKEI 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I+ GL KA I V+ GF + +G+ T+ VV S +++I+D Sbjct: 181 VDFYDIYGGLYKAFVYGIVIATVSNYFGFKTSGGNQGVGRATTSSVVISSMLILILDYFL 240 Query: 365 AIF 367 Sbjct: 241 TAI 243 >gi|327540665|gb|EGF27237.1| ABC transporter permease protein [Rhodopirellula baltica WH47] Length = 296 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 119/256 (46%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I+++ +G + T + + +++ Y VGV +PVV L Sbjct: 29 RWIMQWGTAVVGGVTAVGDLAMFTWQMFVWMFTRMPRRDTVLVNFYQVGVLSLPVVALTG 88 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A Q +Q G E +++ +RE+G +L A M+AGR G A+ A +G+M Sbjct: 89 SFIGMVLAVQSYYQFHTIGLETHLGVVINTSLVRELGPVLAATMLAGRVGGAMAAVLGTM 148 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ TMG D + L+ PR A ++ +P LTI+A+F I+G I A Sbjct: 149 RVTEQIDALTTMGADPIHYLVVPRFMACLLLIPALTIVADFMGIVGGYFYSVIILGIDRA 208 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++F G+ K+ F I I++ GF + +GK T V S Sbjct: 209 AYLHHSREGVVAFDLFNGIFKSIFFGGVIAIISCYRGFNCQPGAEGVGKAATEAFVYSFV 268 Query: 356 IVIIIDSLFAIFYFAI 371 +++ ID I + Sbjct: 269 MILAIDLFLNIVLDWV 284 >gi|46579657|ref|YP_010465.1| hypothetical protein DVU1246 [Desulfovibrio vulgaris str. Hildenborough] gi|46449072|gb|AAS95724.1| membrane protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311233455|gb|ADP86309.1| protein of unknown function DUF140 [Desulfovibrio vulgaris RCH1] Length = 267 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 5/257 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + LG + + + L ++ Q+Y +G + V++LI Sbjct: 11 VTALGRSFLRLLGELGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIF 70 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+GS++ AEIG M+I Sbjct: 71 TGMVLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRI 130 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ M ++ + L+SPRI A +++ PLLT L + IIG + I V+ Sbjct: 131 TDQIDALDVMDINPMGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVY 190 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQ 352 F R ++ LA++ G +K+ A + V+ +G+ G+ + T+ VV Sbjct: 191 FHRIATSVELADVTGGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVM 250 Query: 353 SISIVIIIDSLFAIFYF 369 S +V++ D + F Sbjct: 251 SCVLVLVADYVLTSFLL 267 >gi|149907972|ref|ZP_01896640.1| membrane protein, putative [Moritella sp. PE36] gi|149808978|gb|EDM68909.1| membrane protein, putative [Moritella sp. PE36] Length = 262 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 5/254 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + G + +I Q+Y++G + V+ + TG Sbjct: 9 LGRATLALLQGFGKATLFLIHSVVHMFSRPWQWRRVIEQLYFIGAKSIIVICVTGLFTGM 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG + LS+FG+ +++ +RE+G +LTA+MI GR+GSA+ AEIG M+I+E+ Sbjct: 69 VLGLQGYYTLSKFGSTGLLGSAVALTLIRELGPVLTAIMIIGRAGSAMTAEIGIMRISEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++TM +D +R L+SPRI A +IS PLLT + + I G + + I A +F R Sbjct: 129 IDALKTMTIDPIRFLVSPRIIAALISFPLLTAIFDTVGIFGGYLTGSQLLGINPATYFYR 188 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQSIS 355 S+ +A++ G IK+ F + + V G+ + +G TT VVQ+ Sbjct: 189 VESSVIMADVAGGFIKSIFFSITVITVCCYHGYYTHIRRDNFGAKGVGLSTTTAVVQASI 248 Query: 356 IVIIIDSLFAIFYF 369 +V++ID + F Sbjct: 249 LVLVIDYILTTFLL 262 >gi|87311113|ref|ZP_01093237.1| probable permease of ABC transporter [Blastopirellula marina DSM 3645] gi|87286204|gb|EAQ78114.1| probable permease of ABC transporter [Blastopirellula marina DSM 3645] Length = 280 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 115/255 (45%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 I + +G + + +L+ Y VGV +PVV Sbjct: 6 EAFFNWIADWGTLGIEFTIAVGDMSLFALRTMQWLFNRLPKRETLVPNFYQVGVMSLPVV 65 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L G V+A Q FQ Q G E ++++ +RE+G +L A M+AGR GSA+ AE Sbjct: 66 ALTGTFIGMVLAVQSYFQFRQLGLETRLGAVINMTLVRELGPVLAATMLAGRVGSAMAAE 125 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M++ E+IDA+ +MG + + L+ PR A +I +P LT++A+F +G Sbjct: 126 LGTMRVTEQIDALDSMGTNPIHYLVVPRFLACVILIPALTVMADFMGFVGGYFYSVNILG 185 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 I + +IF GLIK+ F I IV+ GF + +G+ T V Sbjct: 186 IDQHYYMYNSEQFVQSWDIFYGLIKSVFFGGTIAIVSCHRGFHCEAGAEGVGRAATAAFV 245 Query: 352 QSISIVIIIDSLFAI 366 S ++ ID I Sbjct: 246 YSFVFILAIDLALGI 260 >gi|302341646|ref|YP_003806175.1| hypothetical protein Deba_0204 [Desulfarculus baarsii DSM 2075] gi|301638259|gb|ADK83581.1| protein of unknown function DUF140 [Desulfarculus baarsii DSM 2075] Length = 244 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 122/244 (50%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 G ++ + + + +++QM +VG + VV+L TG V A Q Sbjct: 1 MGGLSEAGEIVLLLAQAALWLLRPPWRMRLVLKQMEFVGNKSINVVMLTGAFTGGVFALQ 60 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + S FGAE +++ RE+G +LT++M+ GR+GSA+ AEIG+M++ E+IDA+ Sbjct: 61 SYYGFSLFGAESLVGSTVALALTRELGPVLTSLMVTGRAGSAMAAEIGTMRVTEQIDALY 120 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 M ++ V+ L+ PR+ A +I LP LTI+ANF I+G V I VF ++ Sbjct: 121 VMAVNPVQYLVLPRVLAAVIMLPALTIVANFIGILGGYAVGVGMLGINEGVFVAKIIEYV 180 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +I GL+K+ + ++ +GF + +G+ T VV + +++ D Sbjct: 181 EFDDIGMGLVKSAIFGLILSLIGCYKGFYTSGGAEGVGRATTEAVVLASVLILAADYALT 240 Query: 366 IFYF 369 F Sbjct: 241 AIMF 244 >gi|42520801|ref|NP_966716.1| hypothetical protein WD0989 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410541|gb|AAS14650.1| membrane protein, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 260 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 114/251 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + LG + + ++ RQ+ +G +P+V L Sbjct: 8 SVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNIARQIIEIGFFSLPIVGLTGV 67 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GA I Q + E L++I ++E+G +L ++++ G+ GS++ AEIG+M+ Sbjct: 68 FIGAAIVLQSSLSDPSINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMR 127 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I E+IDA+ T+ ++ + LI+PRI A II P+LT+ A+ I G I ++ + Sbjct: 128 ITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNI 187 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + TGLIKA I + + G+ + +G T+ VV S + Sbjct: 188 YIKHTAQFFNTYDFITGLIKATAFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSIL 247 Query: 357 VIIIDSLFAIF 367 +I+ + + + Sbjct: 248 IILANYMITLI 258 >gi|149194581|ref|ZP_01871677.1| abc transporter, permease protein [Caminibacter mediatlanticus TB-2] gi|149135325|gb|EDM23805.1| abc transporter, permease protein [Caminibacter mediatlanticus TB-2] Length = 259 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 111/255 (43%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + + G + + L Q+Y++G + V+ L S Sbjct: 4 KLLDNIGTFTLNLIKGFGDFTLFQFNILKLIFTPPYRIKELFNQIYFMGYGSLGVIFLTS 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F TG V A Q +FG E F + I ++E+G + ++M+ R SA AE+GSM Sbjct: 64 FFTGLVEAVQLYNGFHKFGVEDFMGYTIFISIVKELGPVFASLMVISRGISAYAAELGSM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+ M ++ + LI PRI A IISLPLL + + + IGA ++ + Sbjct: 124 KVTEQIDALEVMAVNSKQYLIVPRILATIISLPLLILFFDAVSNIGAYLISTYSLGVNGF 183 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + +I G+IK I + G+ + +G+ T VV S Sbjct: 184 AYLDHIRQFGEIRDIIEGVIKGAVFGYIISAIGTYIGYNTRGGAKGVGQSTTKAVVYSSV 243 Query: 356 IVIIIDSLFAIFYFA 370 V + D + + + Sbjct: 244 AVFVADYVLSAIFLV 258 >gi|297844946|ref|XP_002890354.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp. lyrata] gi|297336196|gb|EFH66613.1| hypothetical protein ARALYDRAFT_472206 [Arabidopsis lyrata subsp. lyrata] Length = 350 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 113/232 (48%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 109 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 168 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 169 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 228 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 229 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 288 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + F+F Sbjct: 289 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 340 >gi|225433662|ref|XP_002265320.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 474 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 111/236 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V G+ K ++ ++Q+ VG V V IL + G Q + ++ G Sbjct: 229 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 288 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G + V Sbjct: 289 LNRSVGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGTNPVDY 348 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L++PR+ A I+LP LT+L + ++++ Y I + +I + + Sbjct: 349 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 408 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I V+ G + +G+ T+ VV S+ + I D + +F Sbjct: 409 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 464 >gi|58697152|ref|ZP_00372577.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila simulans] gi|58698663|ref|ZP_00373555.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58699132|ref|ZP_00373959.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630652|ref|YP_002727443.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi] gi|58534353|gb|EAL58525.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534816|gb|EAL58923.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila ananassae] gi|58536541|gb|EAL59904.1| ABC transporter permease protein RC0129 [Wolbachia endosymbiont of Drosophila simulans] gi|225592633|gb|ACN95652.1| hypothetical protein WRi_009360 [Wolbachia sp. wRi] Length = 260 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 114/251 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + LG + + ++ RQ+ +G +P+V L Sbjct: 8 SVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNVARQIIEIGFFSLPIVGLTGV 67 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GA I Q + E L++I ++E+G +L ++++ G+ GS++ AEIG+M+ Sbjct: 68 FIGAAIVLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMR 127 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I E+IDA+ T+ ++ + LI+PRI A II P+LT+ A+ I G I ++ + Sbjct: 128 ITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNI 187 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + TGLIKA I + + G+ + +G T+ VV S + Sbjct: 188 YIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSIL 247 Query: 357 VIIIDSLFAIF 367 +I+ + + + Sbjct: 248 IILANYMITLI 258 >gi|116619717|ref|YP_821873.1| hypothetical protein Acid_0582 [Candidatus Solibacter usitatus Ellin6076] gi|116222879|gb|ABJ81588.1| protein of unknown function DUF140 [Candidatus Solibacter usitatus Ellin6076] Length = 265 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 132/239 (55%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + ++ + +I QM +GV +P+V+L F +GAV+A Q + L+Q+ Sbjct: 25 EFFVLAGKAFQNIFRRPHYGDDIILQMDTIGVGSLPIVVLTGFFSGAVMALQMSRALAQY 84 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G + ++S+ RE+G +LTA+M+AGR+ S I +E+GSMK+ E+IDA+R +G D V+ Sbjct: 85 GQVGKTGTVVSVTLARELGPVLTALMVAGRNASGIASELGSMKVTEQIDAMRALGTDPVQ 144 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PR+ A + LPLLTI+A+F + G I+ + ++P +++ ++ G Sbjct: 145 KLVTPRLIATGVMLPLLTIIADFVGMFGGFIIAKFFLNLPPRQYWTSVWRALEWNDVTQG 204 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 L+K A I +V G + +G+ T VV + +V ++D L + + G Sbjct: 205 LLKPLIFAIVISLVGCFYGLRTTGGTQGVGRSTTQAVVLATVLVFVLDLLITKIFVSQG 263 >gi|223940418|ref|ZP_03632271.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223890913|gb|EEF57421.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 259 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 72/249 (28%), Positives = 124/249 (49%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 LG + T E +S + KG + I Q+Y++GV VV++ TG V+ Sbjct: 7 RFVAEWLQGLGRISLLTKEALSSLFSLKGSWGNFIYQLYFIGVKSQSVVLITGAFTGMVL 66 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q +Q Q + ++ ++S+ E+G +LTA+M+AGR G+A+ AEIG+MK+ E++D Sbjct: 67 CAQTYYQFHQVKLDTATLAVVSVSMCSELGPVLTALMVAGRVGAAMAAEIGTMKVTEQVD 126 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+RT+ V L+ PR+ A ++SLPLLT A II +V I ++ Sbjct: 127 ALRTLATHPVDYLVVPRLTASVVSLPLLTAEAIAVGIISGYMVGVYLLGIDPVYSYTNML 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +++ TG+IK+ I I+ +G G + +G+ T VV + ++I + Sbjct: 187 KYTNSSDVMTGIIKSVIFGVIIAIIGCYKGMTCGEGAEGVGRATTEAVVYASITILISNF 246 Query: 363 LFAIFYFAI 371 + + Sbjct: 247 FLTLCLKEL 255 >gi|296532300|ref|ZP_06895039.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267376|gb|EFH13262.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 261 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 121/254 (47%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + G + E + + + +R +G +PVV L + Sbjct: 7 ALAAIGRGVLGACRAAGAIALFAVEGVSHLVRPPFYPRLFLRAFVEIGYFSLPVVSLTAI 66 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+A Q S+FGAE +++ + RE+G +L +M+AGR G+A AEIG+M+ Sbjct: 67 FTGMVLALQSYSGFSRFGAESAIANVVVLSITRELGPVLAGLMVAGRIGAAFAAEIGTMR 126 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + ++IDA+ T+ + ++ L++PR+ A +++PLL ++A+ ++G ++ A Sbjct: 127 VTDQIDALTTLSTNPMKYLVAPRLLAGTLAMPLLVVVADILGVMGGWLIGTAQLGFTSAS 186 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + + ++ +GL+KA I ++ G+ + +G T VV S + Sbjct: 187 YLTSTLNFVQPMDVISGLVKAAVFGFTITLMGCYSGYNSRGGAQGVGAATTRAVVASSIL 246 Query: 357 VIIIDSLFAIFYFA 370 ++ +D + +F Sbjct: 247 ILALDYILTAMFFG 260 >gi|15606674|ref|NP_214054.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5] gi|2983906|gb|AAC07457.1| hypothetical protein aq_1530 [Aquifex aeolicus VF5] Length = 340 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 33/366 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V + G + I + I + +DLS + ++DT GA + +++ + Sbjct: 8 VLKVEGELTAENIKSL----------KIPKNIEKIDLSDLKKLDTFGATFLALLIKENNI 57 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 ++ +L L+ + + + + SF + + S Sbjct: 58 PLERVEGGEKHVELIKLVLDNLKLPKEIPEKKVSFS------------------LKNLFS 99 Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LGL + ++ ++ + +++ G+ V +++ +SF+ G VIA Q A Sbjct: 100 FPEFLGLFLIHSFKYIKQ-----FEFSAFFKELQTSGLGSVLILVSLSFLIGVVIAYQSA 154 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 QL FGA IF +DL+ I RE+ LLT +++AGR S A +G KINEEIDA+R M Sbjct: 155 VQLRAFGAGIFIVDLVGISTFRELAPLLTGIILAGRVSSGYTANVGLRKINEEIDALRVM 214 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 GL V +L+ PR+ A +I PLLT L+ + ++G +I+ + I FF + Sbjct: 215 GLSPVVLLVLPRVLASLIYTPLLTSLSAVAMLLGGAIIAQVFLGIGVEEFFKKLPEAVAK 274 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++F G +K PF AI + + GF SLG V VV IS++I++D++F+I Sbjct: 275 EDLFAGYVKTPFFGVAIALNGVYYGFLTDPKPESLGYSVMRSVVTGISVIILLDAVFSII 334 Query: 368 YFAIGI 373 + +GI Sbjct: 335 FLRLGI 340 >gi|78357340|ref|YP_388789.1| hypothetical protein Dde_2297 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219745|gb|ABB39094.1| Protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 270 Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 5/254 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ LG V+ + + +++Q+Y++G + V+ LI TG Sbjct: 17 LGRNTLRFIGELGAVLLFFLDAVRHIFIASRLFRKVVQQVYFIGSKSLFVIALIGIFTGM 76 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+GSA+ AEIG M+I+++ Sbjct: 77 VLGLQGYYTLVKFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSAMAAEIGVMRISDQ 136 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ M + + L++PR+ A +I P+LT L N IIG + I V+F R Sbjct: 137 IDALEVMDVPPMGYLVTPRLLASLIVFPMLTALFNTIGIIGGYLTGVVLLGINSGVYFYR 196 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355 S+ +++ G +K A + I++ +G+ G+ + T+ VV S Sbjct: 197 IDSSVGWSDVSGGFLKTMVFAVIVSIISCYQGYFTHMRKDGMGPEGVSNSTTSAVVMSCV 256 Query: 356 IVIIIDSLFAIFYF 369 +V++ D + F Sbjct: 257 LVLVSDYVLTSFLL 270 >gi|190571416|ref|YP_001975774.1| hypothetical protein WPa_1028 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357688|emb|CAQ55136.1| Putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 260 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 115/251 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + +G + + + ++ RQ+ +G +P+V L Sbjct: 8 SVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGV 67 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAVI Q + E L++I ++E+G +L ++++ G+ GS+I AEIG+M+ Sbjct: 68 FIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMR 127 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I E+IDA+ T+ ++ + LI PRI A +I P+LT+ A+ I G + ++ + Sbjct: 128 ITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNI 187 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + + GL+KA I + + G+ + +G T+ VV S + Sbjct: 188 YIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSIL 247 Query: 357 VIIIDSLFAIF 367 +I+ + L + Sbjct: 248 IILANYLITLI 258 >gi|85703132|ref|ZP_01034236.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217] gi|85672060|gb|EAQ26917.1| ABC transporter, inner membrane subunit [Roseovarius sp. 217] Length = 261 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 115/253 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G + + + + + + + +G +PVV + + Sbjct: 8 LASIGRTVLNGLASMGRIALFASDTLSHLARPPFYWREFLHALVQIGWLSLPVVGMTALF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ Sbjct: 68 TGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMKV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G +V D A + Sbjct: 128 TEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVIGIMGGFLVGVGRLDFSAATY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ +GLIK + ++ G G + +G+ + VV + ++ Sbjct: 188 LHNTMDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAASVLI 247 Query: 358 IIIDSLFAIFYFA 370 + + + +F+ Sbjct: 248 LASNYILTEVFFS 260 >gi|327399719|ref|YP_004340588.1| hypothetical protein Hipma_1573 [Hippea maritima DSM 10411] gi|327182348|gb|AEA34529.1| protein of unknown function DUF140 [Hippea maritima DSM 10411] Length = 254 Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 8/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + IG+ + F D + I E K QMY++GV Sbjct: 2 GIIAAIGRFTINFTRDMGGVFLLFISTIKALFE--------KPRFHLTAEQMYFIGVKST 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V L S G V Q +FGAE +++ RE+ +LTA+MI R+ SA+ Sbjct: 54 LIVALTSMFVGMVEVLQIYHGFHKFGAESMIGYTVAVSLGRELSPVLTALMIVARNVSAM 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AE+G+M++ ++IDA+ M ++ + L++PR+ A + LP L L+N IG +V Sbjct: 114 AAELGTMRVTQQIDALEVMAVNPINFLVAPRVIATTVMLPALVSLSNAIGNIGGYLVGIG 173 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + + + ++ GLIKA I ++ G S +G T Sbjct: 174 VLGLNPTSYTKNIQVYIDMTDLTYGLIKAAVFGLIISLIGCYMGLTTKGGSRGVGISTTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV + V++ D F F Sbjct: 234 AVVAASISVLVADYFLTAFLF 254 >gi|218961384|ref|YP_001741159.1| hypothetical protein CLOAM1090 [Candidatus Cloacamonas acidaminovorans] gi|167730041|emb|CAO80953.1| conserved hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 263 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 115/244 (47%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G G+ + Q +G + +++L + TG V A Q Sbjct: 18 NLFAGIGEYTIFVGKCLGKIPSLFKRYQEFLIQFKRIGFDSLFLILLTAAFTGLVTALQA 77 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q + L+ + E+ +LTA+++ G+ G++I AEIG+M+++E+IDA+ + Sbjct: 78 VYQSKGYVPVNLLSVLIGKSTMIELAPVLTALVLTGKVGASIAAEIGTMRVSEQIDALES 137 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 M +D L PRI A +++ PL+T+ AN II A W Y I + FF+ S Sbjct: 138 MNIDPYEFLYMPRILAGVLAFPLVTVFANAVGIICAWYFSWLRYGIHYYTFFNNMRSYFI 197 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++++ GL K+ I A G + +GK T+ VV S ++++D + A Sbjct: 198 PSDLWGGLAKSFVFGFIITSFACYHGDRCFGGAEGVGKATTSTVVYSSVAILVMDFIVAW 257 Query: 367 FYFA 370 F F Sbjct: 258 FLFG 261 >gi|254513828|ref|ZP_05125889.1| ABC transporter permease protein [gamma proteobacterium NOR5-3] gi|219676071|gb|EED32436.1| ABC transporter permease protein [gamma proteobacterium NOR5-3] Length = 369 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 168/376 (44%), Gaps = 18/376 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S + + AG+W + + + + VD++++T D +++ Sbjct: 9 LSADDQLLI--AGDWSAAVLPTLDSLFTTLLE---TEGPLKVDVTSVTVWDPRLEAKLLH 63 Query: 61 FME---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 +++L G QLF L + F + ++ IG Sbjct: 64 LQRLAYAGQRQLELLGTPDSQTQLFKLATAVAPYAGTAATSSGLFTLKNLRSTLADIG-- 121 Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +D LG S + I + G + ++ L S + Sbjct: 122 -----DDLLESLEFLGATTSAVLRTLLGRSGMRR--REFIESLAQAGPQAMGIITLTSVL 174 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++A GA QL QFGA +F DL++I LRE+G L+TA+++AGR+G+A A++ +M+ Sbjct: 175 VGMILAYLGAAQLQQFGAAVFVADLVAIGMLREMGALMTAIVMAGRTGAAYAAQLSTMQT 234 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDAI T+G++ + L+ PR+ AL++ +PLL + A+ I V+ + + Sbjct: 235 NEEIDAITTLGINPLEFLVVPRMLALLLMMPLLVVYADAL-GIVGGAVVAGGMGVTPLQY 293 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S+ S T+ + G++K A I I + G G +S ++G+ T VV ++ + Sbjct: 294 ISQLDSAITITHFLVGVVKGLIFALLIAIAGCRAGMNAGRNSEAVGRATTEAVVTAVVYL 353 Query: 358 IIIDSLFAIFYFAIGI 373 I+ D+ I +GI Sbjct: 354 IVADAAINILCQLLGI 369 >gi|295691537|ref|YP_003595230.1| hypothetical protein Cseg_4204 [Caulobacter segnis ATCC 21756] gi|295433440|gb|ADG12612.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 269 Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 122/254 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + ++G V A++ F L+RQ +G +PVV L + Sbjct: 15 IQALGRSTLAAVRMVGAVGVFAARGTAAALSPPWFPGQLLRQFMAIGFFSLPVVGLTAVF 74 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 75 TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+RT+ D R L+ PR+ A ++ LPLLT +A+ + G +V + D V+ Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPLLTAVADTIGVAGGWLVATRVLDFSPTVY 194 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I +GLIKA + ++ G+ + +G+ T VV S ++ Sbjct: 195 IRNTIDFLESWDIVSGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254 Query: 358 IIIDSLFAIFYFAI 371 D L F+ + Sbjct: 255 FASDYLLTTFFTHM 268 >gi|15605864|ref|NP_213241.1| hypothetical protein aq_355 [Aquifex aeolicus VF5] gi|2983037|gb|AAC06647.1| hypothetical protein aq_355 [Aquifex aeolicus VF5] Length = 245 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 118/243 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G T +K L I Q+ YV PVV++ S TG VIA Sbjct: 1 MTKFLEEVGRATLLTLWSIFFLFKKPPRLKHFISQLTYVAAETTPVVLVTSLFTGGVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +F AE +++I RE+G +LT++M+ R GSA+ A IG+M+I ++IDA+ Sbjct: 61 QTYSTFHRFNAEYLIGAVVAISMGRELGPVLTSLMVVARVGSAMTASIGTMRITQQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M ++ + L++PRI+A +PLLT+L++ + I G V K + + +++ + Sbjct: 121 EVMAINPISFLVTPRIFATTFGVPLLTVLSDVAGIFGGWFVATKLFGVNEYLYWQKMVDL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I GL KA F IG V+ GF + +GK T VV S +++I D Sbjct: 181 TEFHDIVGGLYKATFFGFIIGAVSCYYGFYTKGGTAGVGKATTNSVVTSSMLILISDYFL 240 Query: 365 AIF 367 Sbjct: 241 TAV 243 >gi|212703465|ref|ZP_03311593.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098] gi|212673125|gb|EEB33608.1| hypothetical protein DESPIG_01509 [Desulfovibrio piger ATCC 29098] Length = 264 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 5/255 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG V + + + I+Q+Y +G + V++LI G Sbjct: 10 RLGAAVLRMLDSLGAVTLFMLDGLRHIFTSPRIVPRTIQQLYVIGYKSLFVILLIGIFCG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L QFG+ +S+ +RE+G +LTA+M+AGR+GS++ AEIG M+I++ Sbjct: 70 MVLGLQGYYTLVQFGSVGMLGSAVSLSLIRELGPVLTAIMLAGRAGSSMAAEIGVMRISD 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ M ++ + L+SPR+ A +++ PLLT + + IIG + I + Sbjct: 130 QIDALDVMDINSMAYLVSPRLVASLLAFPLLTAIFDVIGIIGGYLTGVLMLHINEGAYLY 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSI 354 R S+ T+ ++ G IK+ + V +G+ + ++G T+ VV S Sbjct: 190 RIASSVTMNDVAGGFIKSLVFGLLVATVCCHQGYTTHMRRDSVGPEAVGNATTSAVVISC 249 Query: 355 SIVIIIDSLFAIFYF 369 ++++ D + F Sbjct: 250 VLILVADYVLTSFLL 264 >gi|289547869|ref|YP_003472857.1| hypothetical protein Thal_0093 [Thermocrinis albus DSM 14484] gi|289181486|gb|ADC88730.1| protein of unknown function DUF140 [Thermocrinis albus DSM 14484] Length = 245 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 122/243 (50%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G T ++ L ++Q+ Y+G VPVV++ S +G VIA Sbjct: 1 MLRVFEEVGKAALLTFLGIYFLFRNPPRLYHFVKQLAYLGAETVPVVVITSLFSGGVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +F AE ++++ RE+G +LTA+M+ R GSA+ A IG+M+I E+IDA+ Sbjct: 61 QTYSTFHRFNAEFLIGAVVALSMFRELGPVLTALMVTARVGSAMTASIGTMRITEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ V L++PRI A ++ LPLLTI+++ + I+G V + + +F+ R Sbjct: 121 EVMGMNPVSYLVTPRIVAGVLGLPLLTIISDVAGILGGWFVAVGLFGVNNHLFWERMRDL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + GL KA F + V+ GF + +G+ T+ VV S +V+I D Sbjct: 181 VEFYDFVGGLYKAVFFGLVVSAVSCYFGFYTKGGTEGVGRATTSSVVTSSMLVLISDYFL 240 Query: 365 AIF 367 Sbjct: 241 TAI 243 >gi|297621446|ref|YP_003709583.1| putative permease component of ABC transporter [Waddlia chondrophila WSU 86-1044] gi|297376747|gb|ADI38577.1| putative permease component of ABC transporter [Waddlia chondrophila WSU 86-1044] Length = 274 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 124/249 (49%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +N + LG ++K + QMY +GV +PVV + F TG V Sbjct: 13 LNILVNTLAALGDYFRLIALVIWEAFKNPPQAKLIRNQMYEIGVLSLPVVAITGFSTGMV 72 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q FQL+ G + +++ + E+G +LTA M+ GR G+++ AE+G+MK+ E+I Sbjct: 73 LAAQSFFQLADKGLASATGLMVAKAMMVELGPVLTAFMVTGRVGASMCAELGTMKVTEQI 132 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+++M ++ + LI+PR A + LPLLT+ + I G ++ +Y +P F Sbjct: 133 DALKSMTVNPLGYLIAPRFIAGTLMLPLLTVFSTVMGIGGGYMIAVWFYKMPSNTFLDPL 192 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T + F+GL+KA I ++ +G + +G+ T VV S+++I + Sbjct: 193 PINITNFDFFSGLVKAISFGIVIVTISCYKGMTTRGGAAGVGRATTNSVVICYSVILIGN 252 Query: 362 SLFAIFYFA 370 L + Sbjct: 253 FLLTVALNE 261 >gi|121534945|ref|ZP_01666764.1| protein of unknown function DUF140 [Thermosinus carboxydivorans Nor1] gi|121306544|gb|EAX47467.1| protein of unknown function DUF140 [Thermosinus carboxydivorans Nor1] Length = 256 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 2/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + K Q G VI E +F L +RQ ++GV +P+V+L Sbjct: 6 LEKLGRTVLVQLETTGRVILLFTETIYHLRRF--NLKLTLRQAAHLGVDSLPIVLLTILF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ Q A + ++GA+ ++++ RE+ +LT V+ AGR G+AI AEIGSMK+ Sbjct: 64 TGMVMTVQTAHEFIKYGAQSSVGGVVAVAMGRELAPVLTGVVAAGRVGAAITAEIGSMKV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R M + + L+ PR+ A + LP+L + A+ G +V Y I + Sbjct: 124 TEQIDALRVMATNPIAYLVVPRLVACVFMLPILVVFADVIGTFGGYLVATLYAGIGSFTY 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ GLIKA I I+ +G + +G+ T VV SI ++ Sbjct: 184 LHSIKVFTAINDVTGGLIKAMVFGAIIAIIGCYKGLTTDEGAEGVGRATTGSVVASIILI 243 Query: 358 IIIDSLFAIFYF 369 + + ++ + Sbjct: 244 FVTNYFLSLLLY 255 >gi|296117337|ref|ZP_06835927.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC 23769] gi|295976103|gb|EFG82891.1| hypothetical protein GXY_16012 [Gluconacetobacter hansenii ATCC 23769] Length = 433 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 147/372 (39%), Gaps = 8/372 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E T+ +G W + D + + + + DT + Sbjct: 70 AEANRTLITLSGEW-IAQTGTTPDFPNNGLAPATKGKPLEFSTDGLGRWDTSLISFLWEL 128 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 T + L+ P F +G+ + Sbjct: 129 KRDARQADLSVSAETLPDSARKLLDLLPEIPPDAHAPPPHHFAP-----VTAVGQFTLDT 183 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +N+ + + + L+ + G + + +V +++F+ GA+ Sbjct: 184 LNEIGCVSEMGVATAKGGLAALLGKGMMRTI--DLMSDVRAAGPTALVIVGVVNFLVGAI 241 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A GA QL +F A+I+ L+ I +RE+ ++TA+++AGR+G A A I +M+ NEEI Sbjct: 242 LAFVGAVQLHKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARISTMQGNEEI 301 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ G+ LI P + ALI+++PLL + + G V + ++ +F Sbjct: 302 DALTVFGIPVASYLILPSVLALILTMPLLYLYGCLIGMFGGFFVSYIMLNVTPLGYFHET 361 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L+ G IK+ IG+ + + G G + +G T VV I VI ID Sbjct: 362 LYAVALSQFVFGFIKSIVFGGFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVIAID 421 Query: 362 SLFAIFYFAIGI 373 ++FA+ + I Sbjct: 422 AIFAVIANVLDI 433 >gi|94498322|ref|ZP_01304881.1| ABC transporter, permease protein, putative [Sphingomonas sp. SKA58] gi|94422202|gb|EAT07244.1| ABC transporter, permease protein, putative [Sphingomonas sp. SKA58] Length = 303 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 4/298 (1%) Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLV 135 E L LI Q+ G++++ D+ G + Sbjct: 10 GEREDLQRLIDLVRPAL--EQESSGKAGVTGVLGFFERFGRQVIGTAGDAYQMLVFTGQL 67 Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 I G + + + L+ M G++G+P+V +++F GAVIA G L+ G Sbjct: 68 IIALGRTLGNPRRLRM--TPLVAFMQDAGINGLPIVFIMTFFIGAVIALVGTNLLTTLGV 125 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 E+F+I L+ + LRE GV++TA++++GRS S+ A+IGSM++N+E DA++ MG+D L Sbjct: 126 EVFTIQLVGVAILREFGVVITAILLSGRSASSFAAQIGSMRMNQETDAMQVMGVDRFDAL 185 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI A ++ +PL+T A+ + G +V W DI F R T + + + G+ Sbjct: 186 VIPRILAALLMMPLMTFCADIGGLAGGLLVSWVTIDISPVFFIQRTLETVDIKHFWIGMC 245 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 KAPF+A I + G VG SLG+ VT+ VVQSI +VI+ D++FA+ + A+ + Sbjct: 246 KAPFLALIIAAAGCRHGLMVGGDVQSLGQNVTSAVVQSIFMVIMFDAIFAVIFMALDL 303 >gi|292670497|ref|ZP_06603923.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647907|gb|EFF65879.1| ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 310 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + +G V GE + + + S+I QM ++G + +V L Sbjct: 58 RILEAVGAFVLTHLANIGRVTLLYGETIRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTL 116 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +M Sbjct: 117 LFTGVVLTLQIAHEFIRYGAQSTVGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTM 176 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+R M + V LI PR+ A ++ +P+LT+ + ++G + Y I Sbjct: 177 KVTEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYLTAVYYSGISAY 236 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F + A + ++ GLIKA F I ++ G + +GK VV SI Sbjct: 237 TFTNSITQFALIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPSGAEGVGKATMHTVVTSII 296 Query: 356 IVIIIDSLFAIFYF 369 ++ I++++ F F Sbjct: 297 VIFILNAVLTFFLF 310 >gi|242277698|ref|YP_002989827.1| hypothetical protein Desal_0221 [Desulfovibrio salexigens DSM 2638] gi|242120592|gb|ACS78288.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 270 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 5/254 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 S + + G + + G ++++Y++GV + V+ LI TG Sbjct: 17 VGKLSINLLNEAGAMFIFLMHGLLHIFSSLGIFKKSVKELYFIGVKSITVISLIGLFTGM 76 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ Q + LS+FG+E F +++ +RE+G +LTA+M+ GR+GS++ AEIG M+I+E+ Sbjct: 77 VVGLQTQYALSKFGSEGFLGAAVALSLVRELGPVLTAIMLTGRAGSSMTAEIGVMRISEQ 136 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ M ++ + L+SP++ A +IS P+LT + I+G + V++ R Sbjct: 137 IDALELMDINPINYLVSPKLVASLISFPILTAFFDLIGIVGGYLSGVMLMGGNAGVYWHR 196 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355 H+ +I G K+ A + V +G+ G + + TT VV S Sbjct: 197 VHTALGWDDISAGFNKSLVFAVLVCTVCCFQGYFTHHRKDGKGPEGVSQATTTAVVMSCV 256 Query: 356 IVIIIDSLFAIFYF 369 +V++ D + Sbjct: 257 LVLVADYIITSLLL 270 >gi|213018814|ref|ZP_03334622.1| putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995765|gb|EEB56405.1| putative membrane protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 244 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 114/242 (47%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G + + + ++ RQ+ +G +P+V L GAVI Q Sbjct: 1 MNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAVIVLQ 60 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + E L++I ++E+G +L ++++ G+ GS+I AEIG+M+I E+IDA+ Sbjct: 61 SSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDALT 120 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+ ++ + LI PRI A +I P+LT+ A+ I G + ++ ++ Sbjct: 121 TLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFEFNHNLNIYIKYTAQFF 180 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + + GL+KA I + + G+ + +G T+ VV S ++I+ + L Sbjct: 181 NMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTVVISSILIILANYLIT 240 Query: 366 IF 367 + Sbjct: 241 LI 242 >gi|302340503|ref|YP_003805709.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] gi|301637688|gb|ADK83115.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] Length = 253 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 118/249 (47%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + +++ ++ Q ++GV V ++ L S G + Sbjct: 3 RRLVRTFEQFGSFCLFALDSFRWTFRRPWRPGLVLEQAEHIGVDSVLIIALSSLSIGMIF 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q ++ F AE +++ RE+ + T++M+ ++GSA+ AEIG+M+++E+ID Sbjct: 63 SLQVTDLMAMFRAETMVGSAVAMTMGRELAPVFTSLMLVAKNGSAMAAEIGTMRVSEQID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ TM ++ ++ L+ PRI II P+LT L+N ++G+ +V + A + + + Sbjct: 123 AMETMSVNPIQYLVVPRIIGSIIVFPILTALSNVVGVLGSYVVSIHMKGVDPAGYLDQLY 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +I++G IKA M + ++ GF S +G T VV + V++ D Sbjct: 183 RFVDPVDIWSGFIKAAIMGALVSLICCFFGFTTSGGSKEVGTASTKAVVTASVAVLVSDY 242 Query: 363 LFAIFYFAI 371 + + I Sbjct: 243 IMSDIMLKI 251 >gi|163783076|ref|ZP_02178071.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1] gi|159881756|gb|EDP75265.1| hypothetical protein HG1285_00835 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 117/243 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + +K + I Q Y+ VV++ S TG VIA Sbjct: 4 LLKLTEEVGKASLLALQAVYFLFKKPPKVRHFIDQFTYIAAETSLVVLVTSTFTGGVIAL 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +F AE ++++ RE+G +LT++M+ R GSA+ A IG+M+I ++IDA+ Sbjct: 64 QTYSTFHRFNAEYLIGAVVALSMGRELGPVLTSLMVVARVGSAMTANIGTMRITQQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M ++ VR L++PRI+A + +PLLTI++N + + G +V K + + +++ + Sbjct: 124 EVMAVNPVRYLVTPRIFATTVGVPLLTIVSNVAGMFGGWLVATKLFKVNEYLYWQKMIDL 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I GL KA I V+ GF + +G+ T VV + +++I D Sbjct: 184 TEFYDIVGGLYKAFVFGFIIAAVSCYFGFYTRGGTEGVGRSTTNSVVTASMLILITDYFL 243 Query: 365 AIF 367 Sbjct: 244 TAI 246 >gi|320103291|ref|YP_004178882.1| hypothetical protein Isop_1750 [Isosphaera pallida ATCC 43644] gi|319750573|gb|ADV62333.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644] Length = 280 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 116/245 (47%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + G + + L+ + +GV +PVV + Sbjct: 15 LTRVGERIITMVSEFGSWVQFSAATLGWMVARPPRRSHLVPNFFTIGVRSLPVVAVTGLF 74 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ Q + G E +++I ++E+G +L A M+AGR GSA+ AE+G+M++ Sbjct: 75 IGMVLSVQSFNSFKEMGLETRLGSVVNISLVKELGPVLAATMLAGRVGSAMAAELGTMRV 134 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ +G++ + L+ PR A ++ +P LT++A+F+ +G S V K + + Sbjct: 135 TEQIDALHALGVNPIAYLVVPRFLACVVLIPALTLVADFAGALGGSFVSVKMLGVDGYYY 194 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + S ++ GL K+ F AI +++ GF + +G+ T V S + Sbjct: 195 WKHSQSFVEPLDVVAGLFKSVFFGAAIALISCHRGFHSKGGAEGVGQAATEAFVSSFIAI 254 Query: 358 IIIDS 362 + +D Sbjct: 255 LFLDF 259 >gi|320107063|ref|YP_004182653.1| hypothetical protein AciPR4_1853 [Terriglobus saanensis SP1PR4] gi|319925584|gb|ADV82659.1| protein of unknown function DUF140 [Terriglobus saanensis SP1PR4] Length = 259 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 125/250 (50%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + L +G S + + QM +G +P+VIL F TG V Sbjct: 7 VDFTKRSIAALQEYSLLSGRAMKSLLTPPIYWDEIFTQMDSIGFGSLPIVILAGFFTGCV 66 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q A L QFGA + L+++ ++E+G +LT +M++GR+ S I +E+GSM++ E+I Sbjct: 67 LALQSATALQQFGAVSKTGSLVALSMVKELGPVLTGLMVSGRNASGIASELGSMRVTEQI 126 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R +G D VR L+ PRI A +I L L+IL+ I G ++V + + +F Sbjct: 127 DAMRALGTDPVRKLVLPRIAATVIMLAFLSILSAAMGIAGGALVSVALLGLNSSAYFHSS 186 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ ++ GL+K F I V G + +GK T VV S +I++D Sbjct: 187 YASLVYGDVVQGLVKPVFFGFIIASVGCYFGMTTKGGTQGVGKSTTQAVVISSVCIIVVD 246 Query: 362 SLFAIFYFAI 371 L I Sbjct: 247 FLLTRLMIGI 256 >gi|239906932|ref|YP_002953673.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239796798|dbj|BAH75787.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 269 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 131/255 (51%), Gaps = 5/255 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG + T + +++Q+Y++GV + V+ LI TG Sbjct: 15 ALGRVTLRFVAELGGLFLFTLQGLWRILVPAPSWSKIVQQVYFIGVKSIFVIALIGLFTG 74 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L +FG+E +++ +RE+G +LTA+MI GR+GS++ AE+G M+I+E Sbjct: 75 MVLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMITGRAGSSMAAELGIMRISE 134 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ TM ++ +R L++PR+ A +I PLLT + + I+G + I V+F Sbjct: 135 QIDALSTMDINPMRFLVAPRLAASLICFPLLTAIFDVVGILGGYLSGCVLLGINPGVYFD 194 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSI 354 R +T LA++ G +K+ A + ++ EG+ + + T+ VV S Sbjct: 195 RIDATVELADVTGGFVKSVVFALLVAVICCYEGYFTHARQGGFGAKGVSLATTSAVVLSC 254 Query: 355 SIVIIIDSLFAIFYF 369 ++++ D + F Sbjct: 255 VVILVADYVLTSFLL 269 >gi|255549070|ref|XP_002515591.1| Inner membrane protein yrbE, putative [Ricinus communis] gi|223545535|gb|EEF47040.1| Inner membrane protein yrbE, putative [Ricinus communis] Length = 350 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 117/239 (48%), Gaps = 1/239 (0%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V+ G+ K K + ++Q+ VG V V +L S G Q + ++ G Sbjct: 105 VLVVAGQVIIRILKGKVHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVREFTKLG 164 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 + ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G + V Sbjct: 165 LQRSVGGVLALAFSRELSPVVTSIVVAGRIGSAYAAELGTMQVSEQTDTLRVLGTNPVDY 224 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L++PR+ A ++LPLLT++ + ++I+ + + + +I + + Sbjct: 225 LVTPRVIASCVALPLLTLMCFTVGLASSAILADGVFGVSINIILDSAQRVLKSWDIISAM 284 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI-FYFAIG 372 IK+ I IV+ G + +G+ T+ VV S+ + I D + F+ +G Sbjct: 285 IKSQVFGAIISIVSCAWGVTTSGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQGVG 343 >gi|86159557|ref|YP_466342.1| hypothetical protein Adeh_3136 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776068|gb|ABC82905.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-C] Length = 386 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 86/369 (23%), Positives = 157/369 (42%), Gaps = 9/369 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V AG W+ + A DV ++++ +A+ + + D+ A + + Sbjct: 26 DGALVIALAGIWRLADGLPPAADVARELDRTPAPRAAVD-AAGVAAWDSALAVFVHGVAQ 84 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIN 123 + + L L+ + + +G + ++ Sbjct: 85 TCRTRGVPLDLRALPAGLARLLDLVREPAA------PASRAAPASHGIARLGVRALRREE 138 Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + +G A + + L L+ Q + G +P+V L+SF+ G ++A Sbjct: 139 RLRAAVAFVGETAIAFARLAARRARLRPQDLWLLVQ--HSGAEALPIVALVSFLVGIILA 196 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 G QL FGAE F D++ I +R++ L+T V +AGRSG A A++ +M + +EIDA Sbjct: 197 FVGITQLRFFGAEAFVADIVGIAIVRDMAALITGVTLAGRSGGAFAAQLATMNVTQEIDA 256 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +RT+G+ V L+ PR+ AL +PLLT+ A+ S I+G ++V P A + + Sbjct: 257 LRTLGISPVEYLVVPRVLALTAMMPLLTLFADASGILGGAMVGTTMLHQPLAGYLHQTAL 316 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ GL+K I + G + +G+ T VV I +I + Sbjct: 317 ALVPGDLAGGLVKGATYGLLIALTGAFRGMQAERSAERVGEAATQAVVTGIVAIISACGV 376 Query: 364 FAIFYFAIG 372 + +F G Sbjct: 377 YQYVFFLFG 385 >gi|116747921|ref|YP_844608.1| hypothetical protein Sfum_0473 [Syntrophobacter fumaroxidans MPOB] gi|116696985|gb|ABK16173.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 5/257 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + Q LG + G A + G LS+++Q+ ++G V+ + Sbjct: 2 IRSLGAYTVVQVGFLGRLGLFLGRMLAGITRPPGKFLSVVKQIQFIGTKSFLVIGFTAIF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A QG + L+ G+E + +S+ +RE+G +LTA+M+ GR+GSA+ AEIG M+I Sbjct: 62 TGMVLALQGYYALASVGSEGWLGKAVSLSLIRELGPVLTALMVTGRAGSAMCAEIGIMRI 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E+IDAI M +D LI+PR+ A +I+LPLLT + I+G +V + + Sbjct: 122 DEQIDAIECMAIDPHSYLITPRLLAALIALPLLTAFCDVVGIVGGYLVGVNLLGVNAGAY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352 S+ +++ G++K+ I + +G+ G + + T VV Sbjct: 182 LDSMESSVVWKDVYMGIVKSICFGVLIIWICTYKGYYAGVDENNFGPEQVSRATTNAVVL 241 Query: 353 SISIVIIIDSLFAIFYF 369 S +++ D + Sbjct: 242 SSISILVCDYVVTSVLL 258 >gi|120602860|ref|YP_967260.1| hypothetical protein Dvul_1816 [Desulfovibrio vulgaris DP4] gi|120563089|gb|ABM28833.1| protein of unknown function DUF140 [Desulfovibrio vulgaris DP4] Length = 267 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 5/243 (2%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + + + L ++ Q+Y +G + V++LI TG V+ QG + L Sbjct: 25 LGAMFIFMLDGFRHIFASTKQLPKIVNQVYVIGYKSLFVILLIGIFTGMVLGLQGYYTLV 84 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FG+E +++ +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+ M ++ Sbjct: 85 KFGSEGLLGAAVALTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDALDVMDINP 144 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+SPRI A +++ PLLT L + IIG + I V+F R ++ LA++ Sbjct: 145 MGYLVSPRIAASLVAFPLLTALFDVIGIIGGYVTGVMLLGINEGVYFHRIATSVELADVT 204 Query: 312 TGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G +K+ A + V+ +G+ G+ + T+ VV S +V++ D + Sbjct: 205 GGFMKSLLFALIVSTVSCYQGYFTHMRRDGMGPEGVSNSTTSAVVMSCVLVLVADYVLTS 264 Query: 367 FYF 369 F Sbjct: 265 FLL 267 >gi|34558257|ref|NP_908072.1| ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34483976|emb|CAE10972.1| ABC TRANSPORTER, PERMEASE PROTEIN [Wolinella succinogenes] Length = 268 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 4/270 (1%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 +G+ ++ G + + + L QM Sbjct: 2 RSKMVTAFFGALGRPVLLLWKS----LEKFGEFLMFHLRLIPAYFTPPFRARELFIQMES 57 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +GV V++L S TG V+A Q QFGAE F + + RE+G + A+M+ Sbjct: 58 IGVGSFWVIVLTSVFTGMVLAIQFYQGFHQFGAENFMSYPIFLAITRELGPVFAALMLTS 117 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R+ SA+ AE+G+M++ E+IDAI T+ +D R LI PRI A +SLPLL IL NF + A Sbjct: 118 RAISAMAAELGTMRVTEQIDAIDTLAIDSKRYLIVPRILASTLSLPLLVILFNFIGNLSA 177 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + + + S L+++ L+KA + +V G+ + + Sbjct: 178 YFISIHVLGVNEESYRSIVRQYLELSDLVISLVKAFVFGYLVSLVGTYIGYNTRGGARGV 237 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G+ T+ VV S + + L + F+ A+ Sbjct: 238 GRSTTSAVVFSAVTIFGANYLLSAFFLAMD 267 >gi|114328883|ref|YP_746040.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114317057|gb|ABI63117.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 259 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 120/250 (48%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 S G + + + + +R + +G +PVV L + TG Sbjct: 9 LGRGFFSACASTGRMGVFGLTALSHLLRPPFYGRMFLRALVEIGYFSLPVVALTAIFTGM 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q ++F AE L+S+ RE+G +L +M+AGR G+A+ AE+G+M++ ++ Sbjct: 69 VLALQSYTGFARFSAESAIASLVSLSVTRELGPVLAGLMVAGRVGAAMAAELGTMRVTDQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T+ ++ L++PR+ A I+LPLL I+A+ ++G +V + + Sbjct: 129 IDALTTLSTHPMKYLVAPRLLAGTIALPLLVIIADILGVMGGWLVASIKLGFNSHTYLAN 188 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + ++ +GL KA I + G+ + +G T+ VV + +++ Sbjct: 189 TIASIHMDDVMSGLTKAAVFGFLIALQGCYHGYNSRGGAQGVGSATTSAVVTASVLILAF 248 Query: 361 DSLFAIFYFA 370 D + +F+ Sbjct: 249 DYVLTELFFS 258 >gi|322435258|ref|YP_004217470.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9] gi|321162985|gb|ADW68690.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX9] Length = 259 Score = 195 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 124/243 (51%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G A+ + + + QM +GV +P+V+L F TG V+A Q A Sbjct: 14 VTAIQDYSLLAGRGVANLFSPPVYWDDIFTQMDSIGVGSLPIVVLTGFFTGCVLALQSAT 73 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L QFG+ + L+++ ++E+G +LT +M++GR+ S + +E+GSM + E+IDA+R +G Sbjct: 74 ALKQFGSISLTGSLVALSMVKELGPVLTGLMVSGRNASGMASELGSMMVTEQIDAMRALG 133 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D +R L++PRI A ++ L LTIL++ I G ++V + + + + + Sbjct: 134 TDPIRKLVTPRIIATVVMLFFLTILSDAVGIAGGALVSVTILGLNLSSYLHTSYQSLLYG 193 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL K F A I V G + +GK T VV S +I++D L + Sbjct: 194 DVVQGLTKPLFSAFIIATVGCFFGLKTKGGTQGVGKATTQAVVYSSVFIIVVDFLVSRLM 253 Query: 369 FAI 371 + Sbjct: 254 IGL 256 >gi|186472351|ref|YP_001859693.1| hypothetical protein Bphy_3498 [Burkholderia phymatum STM815] gi|184194683|gb|ACC72647.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 382 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 80/367 (21%), Positives = 157/367 (42%), Gaps = 4/367 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V G+W + + V I K++ + + ++ S + D+ +M E Sbjct: 20 AVLHLRGDWITCATGVRSAAEVHEIVKAVGACALRLETSNLGRWDSALIVFLMMLRESVR 79 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 + + + + ++L +G+ + ++ Sbjct: 80 KGGTRPFEIDESD--LPHAAQRLLALAAAGSGEVAGIAAVHRSLATQVGEAYFQAWANAV 137 Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S ++G + A + +G +++ M G + +V +++ + GA++A G Sbjct: 138 SIVALVGETALHCTAAFAHRVRTRGV--DVLQLMREAGAGALAIVAIVNGLVGAILAFIG 195 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 A Q +FGA I+ +L+ I +RE+ L TA+++AGR+G A A + +M+ NEEIDA+ Sbjct: 196 AVQFQRFGAGIYVANLVGIAVVREMAALATAIVMAGRTGGAYAAHLATMQGNEEIDALNA 255 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ L+ PR+ AL+ +PLL + + ++ IV DI + + Sbjct: 256 VGIPVFDFLVLPRVIALVSMMPLLYVYSCAVGLLSGFIVTLATLDITAVTYLQQLRGAVD 315 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 GL K+ + + G G + +G+ T+ VV I VI +D++FA+ Sbjct: 316 GVQFAIGLAKSIAFGSFVALAGCHIGLKAGRSAAEVGRAATSAVVVGIVGVISLDAIFAV 375 Query: 367 FYFAIGI 373 A+GI Sbjct: 376 CTNALGI 382 >gi|149178242|ref|ZP_01856835.1| probable permease of ABC transporter [Planctomyces maris DSM 8797] gi|148842891|gb|EDL57261.1| probable permease of ABC transporter [Planctomyces maris DSM 8797] Length = 280 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 120/249 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +LG + E +L MY++G+ +PV+++ Sbjct: 14 IHGLGRGVINTVCLLGDLFLFGWEMLGWIITRLPPRSNLWSCMYHIGIQSIPVILITGGF 73 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A Q Q E +++I + E+G +L A+M+AGR G+++ AE+G+M++ Sbjct: 74 IGMVLAVQSYDQFKLMHLENQIGAVIAISLVEELGPVLAAIMLAGRVGTSMSAELGTMRV 133 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R +G D + L+ PR A + +PLLTI+A+ I+G + + + Sbjct: 134 TEQIDALRALGADPIHYLVVPRFLACCLLIPLLTIVADAVGILGGWFFSTQILGVDSFYY 193 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ G+ K+ F AI +++ GF G + +GK T V S ++ Sbjct: 194 WHYSEQFVYAYDVMGGIFKSFFFGAAISLISCHRGFHCGAGAEGVGKAATEAFVYSFIVI 253 Query: 358 IIIDSLFAI 366 +I+D L + Sbjct: 254 MILDFLLGV 262 >gi|222054639|ref|YP_002537001.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221563928|gb|ACM19900.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 258 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG+K++KF +LG + E L S+ QM +G Sbjct: 1 MAGAIDRIGRKVIKFHEIIGEMLILLGQTVYFFREA-------PRNLASIFAQMAIIGYE 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L+++G++ ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELNKYGSQDIIGAIVGHSMVRELGPVMTSFLVAGRVGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G MK+ EEIDA++T+ ++ VR L PR A I+ +P L I ++ I+G +I+ Sbjct: 114 AMAAELGVMKVYEEIDALKTLDINPVRYLAMPRFIACIVCVPALVIYSDCIGIVGGAIIS 173 Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + + ++ ++ + I GLIKA + +V+ GF + +G Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFQEIGNGLIKAFVFGAIVALVSCYVGFKTSGGARGIGI 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++ D Sbjct: 234 STTRSVVWSFMLILVADYFLTRLLM 258 >gi|225848307|ref|YP_002728470.1| toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense Az-Fu1] gi|225643396|gb|ACN98446.1| putative toluene tolerance protein Ttg2B [Sulfurihydrogenibium azorense Az-Fu1] Length = 247 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 119/243 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + +++K L +++ M +GV+ ++IL F TG V+ Sbjct: 3 FTKFVEHTGEITLFFIKTLIATFKRFPKLKHILKYMEDIGVNAALLIILTGFFTGGVLVV 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + +F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+IDA+ Sbjct: 63 ETYPTFHKFNAEYLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M ++ L+SPR+ A ++ +P LT+L+ S +IG Y I +++ + Sbjct: 123 EVMAVNPYSYLVSPRLIAAVVMVPALTVLSYVSGVIGGYFTSVYIYGINEYMYWEKLKDF 182 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L +IF GL KA + IV G+ + +G+ TT VV + +++I+D Sbjct: 183 TELKDIFGGLYKAAVFGAVLTIVTSYFGYITKGGAEGVGRSTTTAVVVASVLILILDYFL 242 Query: 365 AIF 367 Sbjct: 243 TAL 245 >gi|91201081|emb|CAJ74139.1| strongly similar to ABC-transporter, permease [Candidatus Kuenenia stuttgartiensis] Length = 260 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 69/247 (27%), Positives = 115/247 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 N LG + +I+Q+ ++GV V V++L TG V Sbjct: 12 GNSLHKFIRELGKMGCFFANALFYMLFPPYLFRRIIKQINFIGVKTVLVIVLTGTFTGMV 71 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q + L +FGAE +++ ++E+G ++ A+M+ GR+GSAI AEIG M+I+E++ Sbjct: 72 LALQMYYVLIKFGAEARLGPAVAMSLIKELGPVICALMVTGRAGSAITAEIGIMRISEQV 131 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ M L+ + LI P I A +ISLPLL + + G V + +F Sbjct: 132 DALDAMALNPYKYLIIPNIIAGVISLPLLNAIFVVLGVFGGYAVGVGLMGVSSGTYFGGI 191 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++F G K+ I ++ +GF G + + K T VV S +++I D Sbjct: 192 NDFVAARDVFEGFYKSLSFGVLITWISCYKGFYTGYGAEGVSKATTQSVVISSVVILIWD 251 Query: 362 SLFAIFY 368 Sbjct: 252 YFMTSLL 258 >gi|58584874|ref|YP_198447.1| ABC-type transport system involved in resistance to organic solvents, permease component [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419190|gb|AAW71205.1| ABC-type transport system involved in resistance to organic solvents, permease component [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 260 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 115/251 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I LG + + +L ++ +Q+ +G +P+V L Sbjct: 8 GIRIIGRCFIKLLLRLGSAFIFFIQSLYHCFVPPYYLGNIAKQIIEIGFFSLPIVGLTGI 67 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAVI Q + E L+++ ++E+G +L ++++ G+ GS+I AEIG+M+ Sbjct: 68 FIGAVIVLQSSLSGPLISPEQIIPKLVTVTIIKELGPVLISLIMVGKVGSSIAAEIGTMR 127 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I E+IDA+ T+ ++ + LI+PRI A +I P+ TI A+ I G I ++ + Sbjct: 128 ITEQIDALTTLNINPFKYLIAPRILASVIVFPIFTICADLIGIFGGYITAVFKFNHNLNI 187 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + N TGLIKA I + + G+ + + T+ VV S + Sbjct: 188 YIKYTTQFFNMYNFITGLIKATAFGAIISVSSCYYGYHCQEGARGVSIATTSTVVLSSIL 247 Query: 357 VIIIDSLFAIF 367 +I+ + + + Sbjct: 248 IILANYMITLI 258 >gi|116789794|gb|ABK25388.1| unknown [Picea sitchensis] Length = 462 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 115/232 (49%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ A +K K + ++Q+ VG V +L + G Q + ++ G Sbjct: 220 AGQVIARVFKGKIHTRNTLQQLEVVGPGSSGVCLLTAAFVGMAFTIQFVREFTRLGLTRS 279 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T+++IAGR GSA AE+G+M+++E+ D +R +G D V LI P Sbjct: 280 VGGVLALAFSRELSPVVTSIIIAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVDYLIIP 339 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP+LT++ ++ + ++ Y++ + + +I + ++K+ Sbjct: 340 RVIACCLALPILTLICFSVSLAASVLLADGVYNVSANIILESARRSLHPWDIISAMVKST 399 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + +F Sbjct: 400 VFGGLISVISCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 451 >gi|10086491|gb|AAG12551.1|AC007797_11 Hypothetical Protein [Arabidopsis thaliana] Length = 283 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 113/232 (48%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 42 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 101 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 102 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 161 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 162 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 221 Query: 319 FMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I +++ G + +G+ T+ VV S+ + I D + + F+F Sbjct: 222 VFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQ 273 >gi|149913819|ref|ZP_01902351.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] gi|149812103|gb|EDM71934.1| ABC transporter, inner membrane subunit [Roseobacter sp. AzwK-3b] Length = 261 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 111/251 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + +G V E + + + +G +PVV + + TG Sbjct: 10 RLGAQVLAMLGAVGRVTLFALETVTHLMRPPFYAREFGHALVQIGWLSLPVVGMTALFTG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ E Sbjct: 70 GALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMKVTE 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ + ++ L PR+ A +++PLL + + I+G +V D + Sbjct: 130 QIDALTTLSTNPMKYLTLPRVLAATLAVPLLVGVGDVIGIMGGFLVGVGRLDFGAGTYLH 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +G+IK + ++ G G + +G+ VV + +++ Sbjct: 190 NTLDFLETWDVVSGMIKGAVFGFIVALMGCYYGMNSGRGAQGVGRATKAAVVAASVLILA 249 Query: 360 IDSLFAIFYFA 370 + + +F+ Sbjct: 250 SNYILTELFFS 260 >gi|323699476|ref|ZP_08111388.1| protein of unknown function DUF140 [Desulfovibrio sp. ND132] gi|323459408|gb|EGB15273.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans ND132] Length = 267 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 5/248 (2%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G + + + G ++RQ+Y++GV V V+ LI TG V+ Q Sbjct: 19 REVVDEIGSLTLFLLDSMRLVFAGLGQFPKIVRQIYFIGVQSVSVIALIGLFTGMVMGMQ 78 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + LS FGA+ F +++ +RE+ +LTA+M+ GR+GSA+ AEIG M+I+E+IDA+ Sbjct: 79 LYYALSVFGADGFLGTGVALSMVRELAPVLTAIMLTGRAGSAMTAEIGVMRISEQIDALT 138 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 M ++ +R L++P++ A +IS P+LT N A+ G + K V++SR + Sbjct: 139 IMDINPMRYLVAPKMAACLISFPILTAFFNLIALWGGWLTGVKLLGANAGVYWSRVSGSL 198 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIII 360 +I G IK+ + + EG+ + + T+ VV+S I++ Sbjct: 199 DWDDIEGGFIKSIVFGLLVCTICCFEGYNTHLRSGHAGPEGVSQSTTSAVVKSCVIILAA 258 Query: 361 DSLFAIFY 368 D + Sbjct: 259 DYILTSLL 266 >gi|326405357|ref|YP_004285439.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|325052219|dbj|BAJ82557.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 260 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 123/253 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +LG + + + L + R + +G S +PVV L + Sbjct: 8 IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F + ++ + RE+G +L +M+AGR+GSAI AE+G+M++ Sbjct: 68 TGMVLALQSYIGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ D +R L++PR+ A +I+LPLL ++A+ + G +V + Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+KA I ++ G+ + +G T VV + ++ Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247 Query: 358 IIIDSLFAIFYFA 370 + +D L +F+ Sbjct: 248 LALDYLMTQAFFS 260 >gi|284049033|ref|YP_003399372.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM 20731] gi|283953254|gb|ADB48057.1| protein of unknown function DUF140 [Acidaminococcus fermentans DSM 20731] Length = 260 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 9/260 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G+K+V + ++ G ++RQM +G +P+V Sbjct: 9 WVGRKMVDLCARTGRVVNLFLEACRAAGTA---------DRREVLRQMARLGADSLPIVS 59 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + TG V++ Q A + +FGA +++I RE+ +LT V++AGR G+AI AEI Sbjct: 60 MTILCTGMVMSVQTAKEFVRFGAADSVGGIVAIAMGRELSPILTGVVVAGRIGAAIAAEI 119 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+MK+ E+IDA+R M + +R L++PR+ A+++ +P+L + AN +G V Y I Sbjct: 120 GTMKVTEQIDALRVMAVSPIRFLVTPRLLAIVLMMPVLVVYANLVGDVGGWFVAENYAGI 179 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 +F +I GLIK I + +G + +G T VV Sbjct: 180 SSHMFLESIRGFIEPWDIIGGLIKGAVFGAIIATIGCHKGLNAQQGAEGVGMATTKSVVL 239 Query: 353 SISIVIIIDSLFAIFYFAIG 372 SI ++ I + ++ + G Sbjct: 240 SIILIFIANYFLSVILYVHG 259 >gi|167645294|ref|YP_001682957.1| hypothetical protein Caul_1329 [Caulobacter sp. K31] gi|167347724|gb|ABZ70459.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 270 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 121/252 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + ++G V ++ FL L RQ +G +PVV L + Sbjct: 15 IRALGRSTLAAVRMVGGVGVFAVRGTVAALTPPWFLGQLWRQFVAIGFFSLPVVGLTAVF 74 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 75 TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+RT+ D R L+ PR+ A ++ LP+LT +A+ + G +V + D AV+ Sbjct: 135 TEQIDAMRTLSTDPFRYLVGPRLLAGVLMLPILTAVADTIGVAGGWLVATRVLDFSSAVY 194 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ +GLIKA + ++ G+ + +G+ T VV S ++ Sbjct: 195 IRNTLDFLQGWDVISGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAILI 254 Query: 358 IIIDSLFAIFYF 369 D L F+ Sbjct: 255 FASDYLLTTFFT 266 >gi|160872193|ref|ZP_02062325.1| toluene tolerance protein Ttg2B [Rickettsiella grylli] gi|159120992|gb|EDP46330.1| toluene tolerance protein Ttg2B [Rickettsiella grylli] Length = 262 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +K+ + G + +F+ LI Q+Y++GV + ++++ Sbjct: 5 EKLQQLGQRGLRLLVNFGRATLFLTQLLIRKPRFRKSFPLLIEQLYFIGVLSLIIMVISG 64 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L++FGA L+++ +RE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 65 LFIGMVVGLQGYNTLNKFGASQQLGQLVALSVVRELGPVITALLFAGRAGSALTAEIGLM 124 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ MG+D + +ISPR W IS+P L I+ + AI G +V + + Sbjct: 125 KSTEQLASMEMMGIDPLWRVISPRFWGGFISMPFLMIIFSTVAIWGGYLVGVVWLGVDGG 184 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S +I G+IK+ + +A+ +G+ +G+ T VV S Sbjct: 185 TFWSAMQSAVNFHDDIINGIIKSIVFGGVVTWIAVFQGYDTIPTPQGVGRATTHTVVYSS 244 Query: 355 SIVIIIDSLFAIFYFA 370 ++ +D + Sbjct: 245 LAILGLDFVLTAVMMG 260 >gi|328952205|ref|YP_004369539.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328452529|gb|AEB08358.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 255 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 116/252 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + LG + + + RQ+ ++GV +V+L Sbjct: 4 LTTLGRLWVHFLQELGGMALLLAQAGLWLPRRPYRWRHFFRQLEFIGVKSFFIVVLTGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q + +FG E +++ RE+G +LT++M+A R+GSA+ AE+G+MK+ Sbjct: 64 TGMVLALQAYYGFRKFGGESLLGGAVALSMTRELGPVLTSLMVAARAGSAMAAELGAMKV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+ M + V L PR+ A +I PLLT++A + I+G V D+ F Sbjct: 124 TEQVDALLAMAVQPVHYLALPRLLAAVIMTPLLTVIAVYIGIVGGYFVGVILLDVNPGTF 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++++ GL K+ + +++ EG + +G T VV S + Sbjct: 184 MQKMLEMVNSSDLYNGLFKSVIFGLLLALISCYEGLQAKGGAEGVGLVTTRAVVYSAISI 243 Query: 358 IIIDSLFAIFYF 369 +I D + F Sbjct: 244 LIADYILTALLF 255 >gi|148261852|ref|YP_001235979.1| hypothetical protein Acry_2870 [Acidiphilium cryptum JF-5] gi|146403533|gb|ABQ32060.1| protein of unknown function DUF140 [Acidiphilium cryptum JF-5] Length = 260 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 123/253 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +LG + + + L + R + +G S +PVV L + Sbjct: 8 IAALGRLALGFVIMLGELALFAAAGLSGLVRPPFHLRNFGRALMEIGYSSLPVVALTAVF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+A Q S+F + ++ + RE+G +L +M+AGR+GSAI AE+G+M++ Sbjct: 68 TGMVLALQSYVGFSRFDSSSVIASVVVLSLTRELGPVLAGLMVAGRAGSAIAAEMGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ D +R L++PR+ A +I+LPLL ++A+ + G +V + Sbjct: 128 TDQIDALTTLATDPMRYLVTPRLLAGVIALPLLVVIADILGVAGGFLVSTVRLGFEPNAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+KA I ++ G+ + +G T VV + ++ Sbjct: 188 LRDTVNYLHSNDVVSGLVKAAVFGFVIALMGCFHGYRSRGGAQGVGGATTAAVVSASVLI 247 Query: 358 IIIDSLFAIFYFA 370 + +D L +F+ Sbjct: 248 LALDYLMTQAFFS 260 >gi|16127925|ref|NP_422489.1| ABC transporter permease [Caulobacter crescentus CB15] gi|221236745|ref|YP_002519182.1| organic solvent resistance transport system permease [Caulobacter crescentus NA1000] gi|13425459|gb|AAK25657.1| ABC transporter, permease protein, putative [Caulobacter crescentus CB15] gi|220965918|gb|ACL97274.1| organic solvent resistance transport system permease [Caulobacter crescentus NA1000] Length = 269 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 123/254 (48%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + ++G V ++ FL L RQ+ +G +PVV L + Sbjct: 15 IQALGRSTLATVRMVGAVGVFAVRGVIAALTPIWFLSQLRRQIVAIGFFSLPVVGLTAVF 74 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 75 TGAALALNIFTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 134 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+RT+ D R L++PR+ A +++LPLLT +A+ I G +V + + V+ Sbjct: 135 TEQIDAMRTLSTDPFRYLVAPRLLAAVLTLPLLTAVADIIGIAGGWLVATRVLEFNPTVY 194 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I +GLIKA + ++ G+ + +G+ T VV S ++ Sbjct: 195 IRNTIDFLESWDIISGLIKAAVFGFIVALMGCYHGYNASGGARGVGRATTHAVVSSAILI 254 Query: 358 IIIDSLFAIFYFAI 371 D L + + Sbjct: 255 FATDYLLTTLFTHM 268 >gi|317152440|ref|YP_004120488.1| hypothetical protein Daes_0725 [Desulfovibrio aespoeensis Aspo-2] gi|316942691|gb|ADU61742.1| protein of unknown function DUF140 [Desulfovibrio aespoeensis Aspo-2] Length = 268 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 5/252 (1%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 LG + A + G +RQ+Y++GV V V+ LI TG V Sbjct: 16 GRMFGRVLDELGGMFLFFLSAVALMFAGWGQFSKTVRQIYFIGVQSVTVIALIGLFTGMV 75 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + Q + LS FGA+ F +++ +RE+ +L A+M+ GR+GSA+ AEIG M+I+E+I Sbjct: 76 MGMQLYYALSVFGADGFLGTGVALSMVRELAPVLAAIMLTGRAGSAMTAEIGVMRISEQI 135 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ +R L++P++ A +IS P+L N A+ G + K V+++R Sbjct: 136 DALTIMGINPMRYLVAPKMAACLISFPILNAFFNLIALWGGWLTGVKLLGANEGVYWARV 195 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISI 356 + ++I G IK+ A + + EG+ + + T VV+S I Sbjct: 196 QGSLDWSDIQGGFIKSMVFAVLVCTICCFEGYYTHTRSGHAGPEGVSQSTTNAVVKSCVI 255 Query: 357 VIIIDSLFAIFY 368 ++ D + Sbjct: 256 ILAADYVLTSLL 267 >gi|39996998|ref|NP_952949.1| transporter [Geobacter sulfurreducens PCA] gi|39983886|gb|AAR35276.1| transporter, putative [Geobacter sulfurreducens PCA] gi|298506015|gb|ADI84738.1| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 257 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 2/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + S +LG ++ G + L S+ QM +G VP+ +++F G Sbjct: 6 RVGKKVLSFHEVLGEMLMLLGRTVWFFREAPRNLPSIFNQMAIIGYETVPIASVMAFFVG 65 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +L ++G + ++ + +RE+G ++T+ ++AGR GSA+ AEIG MK+ E Sbjct: 66 MVLALQTGVELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRVGSAMAAEIGVMKVYE 125 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY--YDIPFAVF 297 EIDA++T+ ++ VR L PR+ A ++ +P L I AN I+G +I+ + I ++ + Sbjct: 126 EIDALKTLDINPVRYLAMPRLIACLVCVPALVIFANAVGIVGGAIMSHLHPKIFISYSTY 185 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + L + GL+KA I +VA GF + + + T VV S ++ Sbjct: 186 YDSLKTALKLKEVGAGLVKATVFGGIIALVACYTGFKTSGGARGIAQATTRAVVLSFMLI 245 Query: 358 IIIDSLFAIFYF 369 ++ D Sbjct: 246 LVADYFLTRILM 257 >gi|39995923|ref|NP_951874.1| hypothetical protein GSU0817 [Geobacter sulfurreducens PCA] gi|39982687|gb|AAR34147.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gi|298504937|gb|ADI83660.1| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 257 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 130/249 (52%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I K + +G ++ + G + + +Q++++G + V++L + Sbjct: 5 SIEKIGALTLFVVREMGKMLIFLTYALVNIVIRPGKPIHIYKQIHFIGAKSLFVIVLTAA 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+ QG + L++FG+E +++ +RE+G +L+A+M+ GR+GSAI AEIG K Sbjct: 65 FTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLSALMVVGRAGSAITAEIGIKK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I E+IDA++TM L+ + L+SP+I A +I+LPLL + + I G +V K + Sbjct: 125 ITEQIDALKTMALEPFKYLVSPKILAALIALPLLCAIFDVVGIYGGYVVGVKLLGVNPGA 184 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +FS + ++++G++K+ I V +G+ + + + T VV S + Sbjct: 185 YFSEMERSVEWKDVWSGIVKSFSFGGIIAWVCCYKGYHASHGAEGVSRATTEAVVMSSVL 244 Query: 357 VIIIDSLFA 365 V+I D Sbjct: 245 VLIWDYFLT 253 >gi|291279509|ref|YP_003496344.1| ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754211|dbj|BAI80588.1| ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 256 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 128/248 (51%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + G + +F ++ + L +QM ++GV+ + V+IL TG V Sbjct: 9 GAPILNFIYGSGRIFLFFIDFFRWAFIPPYRVRLLFKQMEFIGVNSLSVIILTGTFTGMV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 A Q +FGAE ++ + RE+G +L+++M+A R+GSAI AEIG+M++ E+I Sbjct: 69 FAFQSYIGFHRFGAEYMVGTVVGLGMARELGPVLSSIMVAARAGSAIAAEIGTMRVTEQI 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ + ++ V+ L+ PR+ A +I +P+L I+A F ++G V + I ++ Sbjct: 129 DALYALAVEPVQYLVVPRMLAGVIVMPILNIIAVFCGVVGGYFVGVEILGINKTLYLEYM 188 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +I+ G+IKA + +V +GF + +GK T VV S ++++ D Sbjct: 189 YRYVDFDDIYNGIIKATVFGLILTLVGCYKGFYTSGGAEGVGKSTTESVVLSSVLILVFD 248 Query: 362 SLFAIFYF 369 + F F Sbjct: 249 YILTAFMF 256 >gi|89054229|ref|YP_509680.1| hypothetical protein Jann_1738 [Jannaschia sp. CCS1] gi|88863778|gb|ABD54655.1| protein of unknown function DUF140 [Jannaschia sp. CCS1] Length = 260 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 117/251 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G + + ++ RQ +G +PVV L +F TG Sbjct: 9 ALGRATLIALATIGQIALFALDALRHLATPPFYIRETARQFLTIGWLSLPVVGLTAFFTG 68 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +A Q ++F AE +++I RE+G +L +M+AGR +AI AEI +MK+ E Sbjct: 69 GALALQIYAGGARFNAEAVVPQIVAISIARELGPVLGGLMVAGRVAAAIAAEIATMKVTE 128 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+RT+ ++ L +PR+ A +SLP+L + + I G +V D A + S Sbjct: 129 QIDALRTLSTHPMKYLTAPRLIAATLSLPVLVAVGDSIGIFGGYLVSTSRLDFNPAAYLS 188 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 T+ ++ +GL+K + ++ G G + +G+ T VV + +++ Sbjct: 189 NTRDFLTIRDVTSGLVKGAVFGFIVALMGCYHGMNSGRGARGVGRATTQAVVSASILILA 248 Query: 360 IDSLFAIFYFA 370 + L +F+ Sbjct: 249 ANYLLTEAFFS 259 >gi|218885146|ref|YP_002434467.1| hypothetical protein DvMF_0038 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756100|gb|ACL06999.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 381 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 85/369 (23%), Positives = 158/369 (42%), Gaps = 9/369 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +G W + A + + I+ + + D+ A + + Sbjct: 20 LRLAVSGAWNLDAPPDGAARASAMARLREPGVATVILVAEGLGDWDSSLAIFVAGVVRAC 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + S L L+ + + + ++ L IG+ ++ Sbjct: 80 RERNLSVDTSGLPAGLIRLVDLSFAV----PERAGAARGDARSGLLERIGEAVLALPMPV 135 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGF-LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G V + LL M G + +P+V LIS + G ++A Sbjct: 136 GSTLDFIGEVAFALYRLARGKADMRRRDLLQF---MSESGSAALPIVSLISMLVGLILAF 192 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 GA QL FGA+I+ L++I +R +G ++T + +AGR+G++ A +G+M++NEE+DA+ Sbjct: 193 VGAVQLRVFGAQIYVASLVAIAMVRVMGAIMTGITMAGRTGASYAAILGTMQVNEEVDAL 252 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 TMGL V L+ PR+ AL++ LPLLT+ A+ ++G IV D+ + + Sbjct: 253 ATMGLRPVEQLVLPRLLALVVMLPLLTVYADLMGMLGGFIVGVFMLDLNPMEYLNATREA 312 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +LAN++ G+ + + G G ++++G T VV I +I+ + Sbjct: 313 LSLANLWIGITHGAVFGVVVALCGCYHGMRCGRSASAVGAATTAAVVSGIVSIIVCTAFI 372 Query: 365 AIFYFAIGI 373 + +GI Sbjct: 373 TVACEVLGI 381 >gi|149202595|ref|ZP_01879567.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035] gi|149143877|gb|EDM31911.1| ABC transporter, inner membrane subunit [Roseovarius sp. TM1035] Length = 261 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 115/253 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + S +G + + + + + + + +G +PVV + + Sbjct: 8 LASIGRTVLSGLAAIGRIALFAADTISQLARPPFYFREFLHALVQIGWLSLPVVGMTALF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ Sbjct: 68 TGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAAEIGTMKV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G +V D A + Sbjct: 128 TEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVGVGRLDFSAATY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ +GLIK + ++ G G + +G+ + VV + ++ Sbjct: 188 LHNTIDFLETWDVVSGLIKGAAFGFIVALMGCYYGMNSGRGAQGVGRATKSAVVAASVLI 247 Query: 358 IIIDSLFAIFYFA 370 + + L +FA Sbjct: 248 LASNYLLTELFFA 260 >gi|260753847|ref|YP_003226740.1| hypothetical protein Za10_1620 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856508|ref|YP_163326.2| hypothetical protein ZMO1591 [Zymomonas mobilis subsp. mobilis ZM4] gi|258553210|gb|ACV76156.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775512|gb|AAV90215.2| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ZM4] Length = 273 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 115/255 (45%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + +G + + + + +G + +PVV L + Sbjct: 19 RCLAAIGRLFIAFLAGIGRIARFGMTILLRGALPPYYPGRFFHEFFEIGWNSLPVVALTA 78 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG+ +AQQ S+F A+ + I +RE+G +L +M+ GR SAI AE+G+M Sbjct: 79 VFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAAELGAM 138 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ T+ D R L++PR++A ++LP L +LAN I G ++ Sbjct: 139 RVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKLGFNPE 198 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++ L+K+ + ++ GF + +G+ T VV + Sbjct: 199 NYLKVTREFLKAEDVHMALVKSAVFGFLVALLGCYNGFFATGGAAGVGRSTTRAVVSAFI 258 Query: 356 IVIIIDSLFAIFYFA 370 +++ + + +F+F Sbjct: 259 MILFSNLMITMFFFG 273 >gi|146277114|ref|YP_001167273.1| hypothetical protein Rsph17025_1067 [Rhodobacter sphaeroides ATCC 17025] gi|145555355|gb|ABP69968.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17025] Length = 260 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 114/252 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G + + ++ + + + +G +PVV L + Sbjct: 7 IAALGRATLGALAAIGRIALFAAAVISHLFRPPFYPREFLNALIQIGWLSLPVVGLTAIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ Sbjct: 67 TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L PR+ A +++P+L + + I G +V D A + Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPVLVAVGDSIGIAGGWLVGVNRLDFNSATY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+K + ++ G G + +G+ + VV + ++ Sbjct: 187 IKNTVDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246 Query: 358 IIIDSLFAIFYF 369 + + L +F Sbjct: 247 LAANYLLTEVFF 258 >gi|319954485|ref|YP_004165752.1| hypothetical protein Celal_2978 [Cellulophaga algicola DSM 14237] gi|319423145|gb|ADV50254.1| protein of unknown function DUF140 [Cellulophaga algicola DSM 14237] Length = 258 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 129/247 (52%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + +G F + + +RQ Y +G + +V++ F+ G V+ Sbjct: 9 IKQALTEIGELTYFSGRFFREALRPPFEFNEFLRQCYQIGNRSLTLVLVTGFIIGLVLDL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q + QFGA + +++ I +RE+G ++TA++ AGR S I AE+GSM++ E+IDA+ Sbjct: 69 QSRPTMIQFGAISWMPNMVGISIVRELGPVITALVCAGRISSGIGAELGSMRVTEQIDAM 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 G + + L+ R+ A I+ LPLL IL++ ++ G++++ ++ F ++F+ Sbjct: 129 EVSGTNPFKYLVVTRVMASILMLPLLVILSDAVSLFGSALIENIKGNVSFQLYFNTIFDA 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ +IK F AIG+V +G+ + +G T VV + ++ +ID + Sbjct: 189 LSYTDLIPAIIKTFFFGFAIGLVGCFKGYYCKKGTAGVGIAANTAVVMTSLLLFVIDFV- 247 Query: 365 AIFYFAI 371 A+F I Sbjct: 248 AVFISNI 254 >gi|241762420|ref|ZP_04760498.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373014|gb|EER62672.1| protein of unknown function DUF140 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 273 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 115/255 (45%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + +G + + + + +G + +PVV L + Sbjct: 19 RCLAAIGRLFIAFLAGIGRIARFGITILLRGALPPYYPGRFFHEFFEIGWNSLPVVALTA 78 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG+ +AQQ S+F A+ + I +RE+G +L +M+ GR SAI AE+G+M Sbjct: 79 VFTGSALAQQVYAAASRFSAQSTVPAAVVIGMVRELGPVLVGLMVVGRVTSAIAAELGAM 138 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ T+ D R L++PR++A ++LP L +LAN I G ++ Sbjct: 139 RVTEQIDAMETLHTDPYRYLLAPRLYAATLALPFLVMLANVIGIFGGYLLSISKLGFNPE 198 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++ L+K+ + ++ GF + +G+ T VV + Sbjct: 199 NYLKVTREFLKAEDVHMALVKSTVFGFLVALLGCYNGFFATGGAAGVGRSTTRAVVSAFI 258 Query: 356 IVIIIDSLFAIFYFA 370 +++ + + +F+F Sbjct: 259 MILFSNLMITMFFFG 273 >gi|299136991|ref|ZP_07030174.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] gi|298601506|gb|EFI57661.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] Length = 259 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 128/255 (50%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 K+V + + + +G + + ++ QM +GV +P+V+L F Sbjct: 2 KLVSPGAFAKNVVASVQEYSLLSGRAIGNLFTNPRYIADTFTQMDSIGVGSLPIVVLTGF 61 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+A Q A L +FGA + L+++ ++E+G +LT +M++GR+ S + +E+GSMK Sbjct: 62 FTGCVLALQAAVSLKEFGAINMTGKLVALSMVKELGPVLTGLMVSGRNASGMASELGSMK 121 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+R +G D +R L++PR+ A + L LTI+++ G ++V + Sbjct: 122 VTEQIDAMRALGTDPIRKLVTPRLVATVFMLFFLTIISDACGTGGGALVAVVLLRLNGPA 181 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 FF + + ++ GL+K F I + G + +GK T VV S + Sbjct: 182 FFHTAYMSLVGGDVVEGLVKPLFSGFIIATIGCYYGLRTTGGTQGVGKATTQAVVASSVL 241 Query: 357 VIIIDSLFAIFYFAI 371 +I++D L I Sbjct: 242 IILVDFLVTQLMIGI 256 >gi|225871870|ref|YP_002753324.1| transporter, putative ER-chloroplast lipid translocase (ECLT) family [Acidobacterium capsulatum ATCC 51196] gi|225792942|gb|ACO33032.1| transporter, putative ER-chloroplast lipid translocase (ECLT) family [Acidobacterium capsulatum ATCC 51196] Length = 259 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 120/238 (50%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 T + ++ + ++ Q Y+G+ +P+VIL F TG V+A A L+QF Sbjct: 19 EYALLTTRALLNLFRRPFYWSDIVFQADYIGIGSLPIVILTGFFTGGVLALNSASTLAQF 78 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA + L+S+ ++E+G +LT++M++GR+ S + +E+GSM + E++DA+R +G D ++ Sbjct: 79 GATAVTGQLVSLSMIKELGPVLTSLMVSGRNASGMASELGSMIVTEQVDAMRALGTDPMK 138 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PRI A + + LTI+++ +G + V + +F + ++F G Sbjct: 139 KLVMPRIVATVCMMFFLTIVSDAIGTLGGAFVSGILLGQNTSQYFHTAYQALRYPDVFEG 198 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 LIK I + G + +G+ T VV + ++I D + +I Sbjct: 199 LIKPVIFGFIIATIGCFYGMKTRGGTQGVGRSTTQAVVVASVLIIATDFFISQIVISI 256 >gi|94969917|ref|YP_591965.1| hypothetical protein Acid345_2890 [Candidatus Koribacter versatilis Ellin345] gi|94551967|gb|ABF41891.1| protein of unknown function DUF140 [Candidatus Koribacter versatilis Ellin345] Length = 258 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 117/237 (49%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G + + +L ++Q +GV +P+VIL F TGA +A + L +F Sbjct: 19 EYAQLAGRSLTNLFSQPRYLSDTLQQADLIGVGSLPIVILAGFFTGAALALNTSATLQKF 78 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G+ + L+S +RE+G +LT +M+AGR+ S + +E+GSMK+ E+IDA+R +G D + Sbjct: 79 GSITLTGQLVSYSMVRELGPVLTGLMVAGRNSSGMASELGSMKVTEQIDAMRALGTDPSK 138 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PR+ + ++ L L+I+++ + G I+ W + +++ + ++ G Sbjct: 139 KLVTPRVISTVVMLFFLSIISDLLGMAGGFIISWTLLGLDANQYWTTAYQALVFQDVLMG 198 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+K I V G + +G+ T VV + ++I D F Sbjct: 199 LVKPVVFGFFIASVGCYYGMNATGGTQGVGRATTQAVVTASVLIIASDLFITRFLMV 255 >gi|152990804|ref|YP_001356526.1| ABC transporter, permease [Nitratiruptor sp. SB155-2] gi|151422665|dbj|BAF70169.1| ABC transporter, permease [Nitratiruptor sp. SB155-2] Length = 263 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 113/249 (45%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 G I + +K + ++QM +GV + V+ L + TG V A Sbjct: 14 QFFRMLERFGAFILFQIKILPLFFKPPYRVKETLQQMDIIGVGSLFVISLTAIFTGLVEA 73 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q +FGAE F + + +E+G + A+M+ R+ SA+ AE+G+M++ E+IDA Sbjct: 74 IQLYHGFHKFGAEEFMGYTIFVSISKELGPVFGALMLVSRAVSAMTAELGTMRVTEQIDA 133 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 I T+ +D + LI PR+ A +S P+L I+ F I A ++ + + + + Sbjct: 134 IDTLAVDSKKYLIVPRVIAATLSTPILVIVFVFLGNIAAYLISVYALGVNPNSYKNTITT 193 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++I TG+IKA I I+ G+ + +G T VV + V + + Sbjct: 194 YLEFSDIGTGIIKAFVFGYLISIIGTYIGYFTRGGARGVGLSTTKSVVYAAMTVFVANYF 253 Query: 364 FAIFYFAIG 372 + + + Sbjct: 254 LSTLFLYLD 262 >gi|126727195|ref|ZP_01743032.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] gi|126703623|gb|EBA02719.1| ABC transporter, inner membrane subunit [Rhodobacterales bacterium HTCC2150] Length = 258 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 115/253 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + +G V + ++ + + +G +PVV L + Sbjct: 4 ALATLGQSTLGLLAAIGRVCLFAFSVVTHMLRPPFYIREFSQALLNIGFFSLPVVGLTAL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG +A Q ++F AE ++SI +RE+G +L+ +M+AGR ++I AE+ SMK Sbjct: 64 FTGGALALQIYAGGARFNAEAVVPSIVSIGMVRELGPVLSGLMVAGRVSASIAAELASMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ + ++ L PR+ A ++LP+L + + I G +V D A Sbjct: 124 VTEQIDALVTLSSNPLKYLAVPRVLAATLTLPILVAVGDSIGIFGGYLVGVNSLDFNAAG 183 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + L ++ +GLIK + I+ G G + +G+ VV S + Sbjct: 184 YLKNTVTFLELWDVTSGLIKGAVFGFILSIMGCYHGMNSGRGAQGVGRATINAVVSSSIL 243 Query: 357 VIIIDSLFAIFYF 369 ++ + L +F Sbjct: 244 ILAANYLLTSLFF 256 >gi|209543397|ref|YP_002275626.1| hypothetical protein Gdia_1228 [Gluconacetobacter diazotrophicus PAl 5] gi|209531074|gb|ACI51011.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 383 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 83/377 (22%), Positives = 157/377 (41%), Gaps = 17/377 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVV----MAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +G TV +GNW + + + ++ A+ DT + Sbjct: 17 DGATVIVLSGNWLAQGGQGPGGPIPTFPPDGLRQAAPGRPLTFRSDALGRWDTGLIAFLW 76 Query: 60 YFMEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 ++ H ++ + +L L+ + + +G Sbjct: 77 DLKQRATQAHLDLRTDTLPDSARKLLDLLPEAPPPPPTPRPRTFAP--------VTALGA 128 Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + + + + E + + L+ + G S + +V +++F Sbjct: 129 FTIESLTEIGTVTELGVETARGGLEAVTGRGRMRSI--DLMSNIRDAGPSALLIVSVVNF 186 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + GA++A GA QL +F A+I+ L+ I +RE+ ++TA+++AGR+G A A I +M+ Sbjct: 187 LVGAILAFVGAVQLRKFAADIYVASLVGIAMVREMSAVMTAIIMAGRTGGAYAARIATMQ 246 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 NEEIDA+ G+ LI P I L+ ++P L + ++G V + A Sbjct: 247 GNEEIDALTVFGIPVSSYLILPSILGLVATMPFLYLYGCLIGMLGGFTVAISMLAVTGAG 306 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +F + + L G IK+ F A IG+ + + G G + +G T VV I Sbjct: 307 YFHQTINAVGLNQFEFGFIKSIFFAILIGLTSCRIGLRSGRSAADVGVAATRAVVVGIVG 366 Query: 357 VIIIDSLFAIFYFAIGI 373 VI +D++FA+ +GI Sbjct: 367 VITLDAIFAVIATTLGI 383 >gi|322420104|ref|YP_004199327.1| hypothetical protein GM18_2600 [Geobacter sp. M18] gi|320126491|gb|ADW14051.1| protein of unknown function DUF140 [Geobacter sp. M18] Length = 258 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +GK+++ F A ++G ++ E + S++ QM +G Sbjct: 1 MTQVFEPLGKRVLYFYQVMGEMAILMGKIVYFVREA-------PRNIPSILAQMAIIGWD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G + ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ +D VR L PR A II +P L I A+ I G +++ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIICVPALVIYADLIGITGGALIS 173 Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + +A ++ + + I GL K+ I +V+ GFA + +G+ Sbjct: 174 NLHPQIFVSYATYYDSLTAALKMKEIGIGLTKSMVFGAIIALVSCYVGFATSGGARGIGQ 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++I D + Sbjct: 234 STTRSVVLSFMLILIADYVLTRLLM 258 >gi|148265726|ref|YP_001232432.1| hypothetical protein Gura_3706 [Geobacter uraniireducens Rf4] gi|146399226|gb|ABQ27859.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 258 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IGKK++ F +LG I E + S+ QM +G Sbjct: 1 MTGVFDRIGKKVILFHEIVGEMLILLGQTIYFFREA-------PRNIASIFAQMAIIGYE 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G++ ++ +RE+G ++T+ ++AGR+GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGSQNIIGAIVGHSMVRELGPVMTSFLVAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ ++ VR L PR A I+ LP L I ++F I G +I+ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDINPVRYLAMPRFIACIVCLPALVIYSDFIGITGGAIIS 173 Query: 287 WKY--YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + + ++ ++ + I GLIKA I +V+ GF + +G Sbjct: 174 NLHPKIFVSYSTYYDSLTAALKFHEIGIGLIKAFVFGAIIALVSCYIGFKTSGGARGIGI 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++ D Sbjct: 234 STTRSVVLSFMLILVADYFLTRILM 258 >gi|163788065|ref|ZP_02182511.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1] gi|159876385|gb|EDP70443.1| ABC transporter, permease [Flavobacteriales bacterium ALC-1] Length = 260 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 128/247 (51%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + K S +G + TG F +K L+ Q Y +G + +V + F Sbjct: 3 GMHKIKAQLDSFLIEIGDMSYFTGRFFKELFKRPFEFKELLNQCYSMGNKSLLLVGITGF 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G V+ Q L +FGA + ++SI +REIG +LTA++ AGR GS I AEIGSMK Sbjct: 63 IIGLVLTLQTRPTLMEFGAVSWMPSMVSISIVREIGPILTALVCAGRIGSGIGAEIGSMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ G + + L+ R+ A+ + LPLL I+ + A++G+ +V D+ F + Sbjct: 123 VTEQIDAMEVSGTNPFKYLVVTRVLAVTLMLPLLVIIGDAVALLGSYLVESVKGDVSFVL 182 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +F++ +I IK+ F AIGIV +G+ + +GK T VV + + Sbjct: 183 YFNQVFDALKFGDIMPATIKSFFFGLAIGIVGCYKGYYCKKGTAGVGKAANTAVVFTSLL 242 Query: 357 VIIIDSL 363 + IID + Sbjct: 243 LFIIDFI 249 >gi|77463016|ref|YP_352520.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126461890|ref|YP_001043004.1| hypothetical protein Rsph17029_1122 [Rhodobacter sphaeroides ATCC 17029] gi|77387434|gb|ABA78619.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126103554|gb|ABN76232.1| protein of unknown function DUF140 [Rhodobacter sphaeroides ATCC 17029] Length = 260 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 116/252 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G + G + ++ + L+ + +G +PVV L + Sbjct: 7 IAALGRATLGMLAAVGRIALFAGAVVSHIFRPPFYPRELLTALIQIGWLSLPVVGLTAIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ Sbjct: 67 TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L PR+ A +++P+L + + I G +V D A + Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLVGVNRLDFNSATY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+K + ++ G G + +G+ + VV + ++ Sbjct: 187 IKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246 Query: 358 IIIDSLFAIFYF 369 + + L +F Sbjct: 247 LAANYLLTEVFF 258 >gi|305664733|ref|YP_003861020.1| organic solvents resistance ABC transporter [Maribacter sp. HTCC2170] gi|88707855|gb|EAR00094.1| ABC-type transport system involved in resistance to organic solvents [Maribacter sp. HTCC2170] Length = 264 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 121/246 (49%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ + +G + + F + K L+RQ Y +G + +V + F+ Sbjct: 8 TIQSVQKLRQFFVEIGELSNFAMRFFKEALKPPYEFKELLRQCYNMGNRSLVLVGVTGFI 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ Q L +FGA + +++ I +REIG ++TA++ AGR S I AE+GSM++ Sbjct: 68 IGLVLTLQSRPTLIEFGAVSWMPNMVGISIVREIGPVITALICAGRIASGIGAELGSMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ G + + L+ RI A + LPLL I + A+ G+++V ++ F ++ Sbjct: 128 TEQIDAMEVSGTNPFKYLVVTRIMATTLMLPLLVIFGDLVALYGSALVENLKGNVSFQLY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F+ ++ IK+ F IG+V +G+ + +G T VV + ++ Sbjct: 188 FNTVFDALEFGDLIPATIKSFFFGFTIGLVGCYKGYYSKKGTAGVGVAANTAVVLASLLL 247 Query: 358 IIIDSL 363 +D + Sbjct: 248 FFVDFI 253 >gi|221638873|ref|YP_002525135.1| ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221159654|gb|ACM00634.1| ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 260 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 116/252 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G + G + ++ + L+ + +G +PVV L + Sbjct: 7 IAALGRATLGMLAAVGRIALFAGAVVSHLFRPPFYPRELLTALIQIGWLSLPVVGLTAIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I RE+G +L +M+A R S+I AEIG+MK+ Sbjct: 67 TGGALALQIYAGGARFSAEAVVPSIVAIGMTRELGPVLGGLMVAARVASSIAAEIGTMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L PR+ A +++P+L + + I G +V D A + Sbjct: 127 TEQIDALVTLSTNPLKYLAVPRVLAATLAVPILVAVGDSIGIAGGWLVGVNRLDFNSATY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ +GL+K + ++ G G + +G+ + VV + ++ Sbjct: 187 IKNTTDFLEVWDVGSGLVKGAAFGFIVALMGCYHGMNSGRGAQGVGRATKSAVVAASVLI 246 Query: 358 IIIDSLFAIFYF 369 + + L +F Sbjct: 247 LAANYLLTEVFF 258 >gi|46447386|ref|YP_008751.1| hypothetical protein pc1752 [Candidatus Protochlamydia amoebophila UWE25] gi|46401027|emb|CAF24476.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 240 Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 119/219 (54%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + + Q++ +GV +PVV + F TG V+A Q FQLS G + +++ Sbjct: 5 RRPPTWILIRDQLFDIGVMSLPVVAITGFSTGMVLAAQSFFQLSDKGLASATGLMVAKAM 64 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 L E+G +LTA M+ GR G+A+ AE+G+M++ E+IDA+RTM ++ + L++PR A +I + Sbjct: 65 LVELGPVLTAFMVTGRVGAAMCAELGTMRVTEQIDAMRTMSVNPLGYLVAPRFLAGMIMM 124 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 PLLT+ + I G ++ +Y +P + F + +G++KA I + Sbjct: 125 PLLTVFSAIMGIFGGYLIAVYFYKMPASSFIDPLPLHINTFDFISGMVKAFVFGIIIVTI 184 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G + +G+ T VV S+++II+ + + Sbjct: 185 SCYKGMKTRGGAAGVGRSTTNSVVICYSVILIINFILTL 223 >gi|312887098|ref|ZP_07746702.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311300410|gb|EFQ77475.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 256 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 130/255 (50%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + I D+ S G + TG F + + + + L+ Q Y +G P++ L F+ Sbjct: 1 MALIEDTRSFLDETGSMAKFTGHFFSHGLRPRFEVKELLGQCYTIGYKSFPLIGLTGFIM 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+ Q L +G + ++ I +REIG ++TA++ AG+ GS+I AE+GSMK+ Sbjct: 61 GLVLTMQLRPSLVSYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E+IDA+ G + + L++ R+ A + LP+LT+L + ++ GA I + FF Sbjct: 121 EQIDAMEVSGTNPYKYLVATRVLATTLMLPILTVLGDAISLFGAYIGVNLSSVTSLHFFF 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + + ++I + K F A+GI+ +GF + +G + VV S ++ Sbjct: 181 TQVFQSLSFSDILPAITKTFFFGFAVGIIGCYKGFNSSKGTQGVGVSANSAVVLSSVLIF 240 Query: 359 IIDSLFAIFYFAIGI 373 IID L F +G+ Sbjct: 241 IIDLLAVQFTNILGL 255 >gi|197119107|ref|YP_002139534.1| transporter membrane protein [Geobacter bemidjiensis Bem] gi|197088467|gb|ACH39738.1| transporter membrane protein of unknown function DUF140 [Geobacter bemidjiensis Bem] Length = 258 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 9/261 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +GK+++ F + G ++ E + S++ QM +G Sbjct: 1 MTQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREA-------PRNVQSILTQMAVIGWD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G + ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ +D VR L PR A I+ +P L I ++ IIG +++ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173 Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + +A ++ + I GL K+ I +V+ GF+ + +G+ Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIKEIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233 Query: 345 KVTTCVVQSISIVIIIDSLFA 365 T VV S ++++ D + Sbjct: 234 STTRSVVLSFMLILVADYILT 254 >gi|288817534|ref|YP_003431881.1| ABC transporter permease protein [Hydrogenobacter thermophilus TK-6] gi|288786933|dbj|BAI68680.1| ABC transporter permease protein [Hydrogenobacter thermophilus TK-6] gi|308751137|gb|ADO44620.1| protein of unknown function DUF140 [Hydrogenobacter thermophilus TK-6] Length = 245 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 121/243 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + T + L I Q+ Y+G VPVV++ S +G VIA Sbjct: 1 MLRVIEEVGRGVILTLMGIYFMFVNPPKLRHFISQLAYLGAETVPVVVITSIFSGGVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +F AE +++I RE+G +L ++M+ R GSA+ A IG+M+I E+IDA+ Sbjct: 61 QTYSTFHRFNAEFLIGAVVAISMGRELGPVLASLMVVARVGSAMTASIGTMRITEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ V L+SPR++A ++ +P+L ILA+ + + G V K + + +F+ + Sbjct: 121 EVMGINPVSYLVSPRVFAGVLGVPMLVILADIAGVFGGWFVAVKLFGVNEYLFWEKMRDI 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A + GL KA F I V+ GF G + +G+ T VV S +++I D Sbjct: 181 AEFYDFIGGLYKAVFFGLIISAVSCYFGFYTGGGTEGVGRATTNSVVVSSMLILISDYFL 240 Query: 365 AIF 367 Sbjct: 241 TAI 243 >gi|206890273|ref|YP_002248716.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742211|gb|ACI21268.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 256 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 121/248 (48%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S LG + + + + +RQ+ + G + VVI +G V Sbjct: 9 GRYSIELFVFLGKMFIFLVDSIYYIFIPPFKFRNFLRQVRFFGNKSMIVVIFTGAFSGMV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A QG + L++FGAE ++++ +RE+G +L A+M+ GR+GSA+ AEIG M+I E+I Sbjct: 69 LALQGYYALNKFGAEALLGPVVALSLIRELGPVLCALMVTGRAGSAVTAEIGIMRITEQI 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ M ++ ++ ++ P I A I++ PLLT + + I G +V + +FS+ Sbjct: 129 DALTVMAVNPMKYVVVPNILAGIVAFPLLTAVFDVIGIYGGYLVSVHALGLSEGTYFSQM 188 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +I GL K+ + + G+ G + + + T VV S ++++ D Sbjct: 189 ELYVDMEDIRIGLYKSLSFGLLVTWICTFMGYTSGYGARGVSRATTNAVVLSSVVILLWD 248 Query: 362 SLFAIFYF 369 + F Sbjct: 249 YMLGAFLL 256 >gi|255658873|ref|ZP_05404282.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella multacida DSM 20544] gi|260848821|gb|EEX68828.1| toluene tolerance ABC efflux transporter, permease [Mitsuokella multacida DSM 20544] Length = 256 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 8/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG +++ + + + G + + K L ++ QM ++GV Sbjct: 2 LLRILSTIGAFVLRRFEELGTIVLLYGETLRAL--------RHKPRLRHILAQMSHLGVD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V L TG VI+ Q A L +FGA+ +++I RE+G +L AV+ AGR GS Sbjct: 54 SLMIVSLTLLFTGVVISLQTADVLIRFGAQGTLGGIVTIAIGRELGPVLVAVVCAGRVGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEI +MK+ E+IDA+R M + V L+ PR+ A +I +P+LT+ + + G ++ Sbjct: 114 AITAEIATMKVTEQIDALRVMAVSPVDYLLVPRMLACMIVVPILTVFGDVIGVFGGWLIA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y + + + H A L ++ G+IKA F I ++ G + +G+ Sbjct: 174 VFYKGLTTYSYMNSIHIFADLFDMTGGVIKAIFFGNVIAVLGCYYGLHCPDGAEGVGRAT 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV SI ++ +++++ + Sbjct: 234 TKTVVASIIVIFLLNAVLTFLLY 256 >gi|114776717|ref|ZP_01451760.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1] gi|114552803|gb|EAU55234.1| hypothetical protein SPV1_10896 [Mariprofundus ferrooxydans PV-1] Length = 266 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 120/250 (48%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + +G + + + Q+ +GV + ++I+ TG Sbjct: 17 RLGRHALRGIEQIGDATMLGLGALSLFFVRPWQGKHFVLQLSALGVGSLIIIIITGAFTG 76 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG + L++FG+E + + +RE+G +L A M+ GR+GS+I AEIG M++ E Sbjct: 77 MVLALQGYYTLAKFGSESLLGAGVGMSIIRELGPVLGAFMVIGRAGSSITAEIGIMRVTE 136 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 + DA+ M ++ + ++ PRI A I++PLL + + I IV + + + + Sbjct: 137 QTDALEMMAINPKQRILLPRIVATTIAVPLLVSIFDVIGIGSGYIVGVELLGVNPGAYMA 196 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ST T+ +I+ G +KA IG++ G+ + + + T VV S V+I Sbjct: 197 ELVSTVTMHDIYGGWVKAVVFGFMIGMICTYMGYRSEPTTEGVARATTQAVVVSSVTVLI 256 Query: 360 IDSLFAIFYF 369 +D + FY Sbjct: 257 LDYILTSFYL 266 >gi|187250741|ref|YP_001875223.1| ABC transporter-like protein [Elusimicrobium minutum Pei191] gi|186970901|gb|ACC97886.1| ABC transporter related [Elusimicrobium minutum Pei191] Length = 258 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 1/253 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + G + +K ++Q +G++ + V L S TG V Sbjct: 6 GREIIIFFNECGKAFNMLRSCMFWLFKAPFEWAQAMQQSVTIGINSLTVTTLTSIFTGMV 65 Query: 182 IAQQGAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +A QG +S +E +F L+S +RE+G +LTAV++ GR+G+A+ AEIG+M++ E+ Sbjct: 66 LALQGGNTISNILSEPMFVGTLVSFSLIRELGPVLTAVVVVGRAGAAVTAEIGTMQVTEQ 125 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T+G + VR L+ PR++A ++++P+LT+ ANFS I G +V +P + Sbjct: 126 IDALYTLGTNPVRQLVLPRMFAFMLTVPILTLFANFSGIFGGYLVAVHGLGVPDVTYLED 185 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + G IK+ F A +G V +G + +G+ T VV S+ +++++ Sbjct: 186 ITNYMNTLDFMHGFIKSIFFAFMVGTVCCYKGLDTKGGAEGVGRSTTIAVVTSMVLILVL 245 Query: 361 DSLFAIFYFAIGI 373 D A GI Sbjct: 246 DYFLTAILTAFGI 258 >gi|77918062|ref|YP_355877.1| toluene export protein [Pelobacter carbinolicus DSM 2380] gi|77544145|gb|ABA87707.1| ABC-type toluene export protein [Pelobacter carbinolicus DSM 2380] Length = 269 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 6/264 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L +G+ K + G + S + ++RQ++++G Sbjct: 4 LVQAVGRFFQKLGAEFIFYLEQAGRMGIFLAACLFSVVRPPYKFGPILRQIHFIGSRSSF 63 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V++ TG V+A QG + L +FG+E +++ +RE+G ++ A+M+ GR+GSAI Sbjct: 64 VILFTGSFTGMVLALQGYYTLRKFGSEGLLGAAVALSLIRELGPVIAALMVVGRAGSAIC 123 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G M+ +E+IDA+ M +D + L++P+ A I+S+PLLT + + + I+G +V Sbjct: 124 AEVGIMRNSEQIDALECMAIDPYKYLMAPKFVAGILSMPLLTAIFDMAGIVGGYLVGVAM 183 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLG 343 + +F + +S+ ++ GL+K+ I + +G+ + G + + Sbjct: 184 LGVNKGAYFQQMYSSVVWNDVEMGLVKSLIFGLLIIWIGAAKGYYLHLERSGGFGAEGVS 243 Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367 + T VV S +++ D L + Sbjct: 244 RVTTDAVVLSSVAILVWDYLLSAI 267 >gi|253700132|ref|YP_003021321.1| hypothetical protein GM21_1507 [Geobacter sp. M21] gi|251774982|gb|ACT17563.1| protein of unknown function DUF140 [Geobacter sp. M21] Length = 258 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 9/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +GK+++ F + G ++ E + S++ QM +G Sbjct: 1 MTQFLEPLGKRVLYFNQVLGEMVILQGKILYFLREA-------PRNVQSILTQMAVIGWD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +PV +++F G V+A Q +L ++G + ++ +RE+G ++T+ ++AGR GS Sbjct: 54 TLPVASVMAFFVGMVLALQTGVELQKYGGQNIIGAIVGHSMVRELGPVMTSFLVAGRCGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AE+G M + EEIDA++T+ +D VR L PR A I+ +P L I ++ IIG +++ Sbjct: 114 AMAAELGVMTVYEEIDALKTLDIDPVRYLAMPRFIACIVCVPALVIYSDVIGIIGGALIS 173 Query: 287 WK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + +A ++ + I GL K+ I +V+ GF+ + +G+ Sbjct: 174 NLHPQIFVSYATYYDSLTDALKIREIGIGLTKSVAFGSIIALVSCYVGFSTSGGARGIGQ 233 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++ D + Sbjct: 234 STTRSVVLSFMLILVADYILTRMLL 258 >gi|83952043|ref|ZP_00960775.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens ISM] gi|83837049|gb|EAP76346.1| ABC transporter, inner membrane subunit [Roseovarius nubinhibens ISM] Length = 261 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 117/260 (45%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 I + + +G V G + + + + +G +PV Sbjct: 1 MSMIAQFLASIGATVLGFLATIGRVTIFAGNTVSHLIRPPFYGREFGAALIQIGWLSLPV 60 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V + + TG +A Q ++F AE +++I RE+G +L +M+A R S+I A Sbjct: 61 VGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELGPVLGGLMVAARVASSIAA 120 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG+MK+ E+IDA+ T+ + ++ L PR+ A +++P+L + + I+G +V Sbjct: 121 EIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVLVGVGDVLGIMGGFLVGVGRL 180 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 D A + TL ++ +GLIK + ++ G G + +G+ + V Sbjct: 181 DFGAATYLHNTLDFLTLWDVTSGLIKGAVFGFLVALMGCYFGMNSGRGAQGVGRATKSAV 240 Query: 351 VQSISIVIIIDSLFAIFYFA 370 V + +++ + L +F+ Sbjct: 241 VAASVLILASNYLLTELFFS 260 >gi|220904015|ref|YP_002479327.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868314|gb|ACL48649.1| protein of unknown function DUF140 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 267 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 5/257 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + LG + A + + ++Q+Y +G +++LI Sbjct: 11 LRRIGSPCLRAIDALGGTAIFFFDGLAQIFASRKIFPRTMQQLYIIGSKSFFLIMLIGVF 70 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L QFG+ +S+ +RE+G +LTA+M+ GR+GS++ AEIG M+I Sbjct: 71 CGMVLGLQGYYTLVQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSMTAEIGVMRI 130 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ M ++ + L+SPR+ A +I+ PLLT + + IIG + I + Sbjct: 131 TDQIDALDVMDINSMGYLVSPRLVASLIAFPLLTAVFDVIGIIGGYLTGVLMLGINEGAY 190 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352 F R S+ T+ ++ G IK+ + + ++G+ ++G T+ VV Sbjct: 191 FYRIASSVTMTDVAGGFIKSVVFGLLVTTICCRQGYYTNKRRDSVGPEAVGNATTSAVVI 250 Query: 353 SISIVIIIDSLFAIFYF 369 S +++ D + F Sbjct: 251 SCVLILAADYVITSFLL 267 >gi|301060804|ref|ZP_07201619.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300445201|gb|EFK09151.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 258 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 4/257 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + K + S +G + ++ + ++Q+ ++G + +++L Sbjct: 2 AVRKLGFSTLSYVRKMGAMGLFFLNTLFYTFVPPVKIYRCLKQIRFIGFQSLLLILLTGA 61 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +G ++ QG + LS+FG++ F ++ + ++E+G ++ A+M+ GR+GSAI AEIG M+ Sbjct: 62 FSGMILGFQGFYSLSRFGSDAFLGPMVGLALIKELGPVIAALMVTGRAGSAITAEIGIMR 121 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+E+IDA+ MGL+ R L+ P + A +I LPLLT + + I G ++ + + Sbjct: 122 ISEQIDALELMGLNPYRYLVVPNLLAAVICLPLLTAIFDVVGIFGGYLIGGELLGVGAGT 181 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF----AVGVHSNSLGKKVTTCVVQ 352 +F + ++ G+ K+ I V +GF G S + K T VV Sbjct: 182 YFGEMAHYVEMKDVLEGIYKSFSFGVIIAWVCCFKGFYSGIYTGFGSEGVSKATTQAVVL 241 Query: 353 SISIVIIIDSLFAIFYF 369 S ++++ D F Sbjct: 242 SSVLILVWDYFMTSILF 258 >gi|294677110|ref|YP_003577725.1| ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294475930|gb|ADE85318.1| ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 259 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 119/254 (46%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G + TG + + + ++ + +G +PVV + +F Sbjct: 5 ALAGLGRTVLAALAGAGRISLFTGAVLSHMLRPPFYSREFLQALLQIGWLSLPVVGMTAF 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TGA +A Q ++F AE +++I +RE+G +L +M+A R S+I AEIG+MK Sbjct: 65 FTGAALALQIYAGGARFSAESVVPSIVAIGMVRELGPVLGGLMVAARVASSIAAEIGTMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ + ++ L PR+ A +S+PLL + + ++G ++ + A Sbjct: 125 VTEQIDALVTLSTNPLKYLAVPRVLAATLSVPLLVAVGDVIGVLGGWLIGTERLGFNSAT 184 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + L ++ +GL+K + ++ G G + +G+ + VV + Sbjct: 185 YIRNTWEYLELWDVGSGLVKGAAFGFLVALMGCYYGMNSGRGAQGVGRATKSAVVAASVA 244 Query: 357 VIIIDSLFAIFYFA 370 ++ + L +F+ Sbjct: 245 ILASNYLLTEVFFS 258 >gi|86158287|ref|YP_465072.1| ABC amino acid transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85774798|gb|ABC81635.1| ABC amino acid transporter, inner membrane subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 251 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 115/247 (46%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ G +I GE A +++ ++ QM ++G +V + G Sbjct: 1 MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q + L QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+ Sbjct: 61 VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM + ++ L+ PR+ A I+ P+LT+L N GA ++ IP F Sbjct: 121 IDAMETMAVSPIQYLVVPRVLASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +IF GL KA + ++ G++ + +G+ T VV S +++ Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYSASGGARGVGEGTTRAVVASSVAILVA 240 Query: 361 DSLFAIF 367 D + Sbjct: 241 DYAGTVL 247 >gi|303327746|ref|ZP_07358186.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3] gi|302862107|gb|EFL85041.1| thioredoxin family protein [Desulfovibrio sp. 3_1_syn3] Length = 267 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 5/254 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +G + + ++Q+Y +G + V++LI G Sbjct: 14 LGRPCLRGIDAVGGMTLFMLAGLGQIFTSARIFPRSLQQIYVIGYKSLFVILLIGIFCGM 73 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG + L QFG+ +S+ +RE+G +LTA+M+ GR+GS++ AEIG M+I ++ Sbjct: 74 VLGLQGYYTLIQFGSVGMLGSAVSLTLIRELGPVLTAIMLTGRAGSSMAAEIGVMRITDQ 133 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ M ++ + L+SPR+ A +IS PLLT + + I+G + I +F R Sbjct: 134 IDALDVMDINSLGYLVSPRLVAALISFPLLTAIFDVIGILGGYLTGVLMLGINEGAYFYR 193 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSIS 355 S+ T+ +I G +KA + V +G+ ++G T+ VV S Sbjct: 194 IASSVTMTDISGGFVKALVFGLLVTTVCCHQGYYTHRRRDSVGPEAVGNATTSAVVISCV 253 Query: 356 IVIIIDSLFAIFYF 369 +++ D + F Sbjct: 254 LILAADYVLTSFLL 267 >gi|196232812|ref|ZP_03131662.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196223011|gb|EDY17531.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 245 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 128/245 (52%), Gaps = 2/245 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G ++ T FK + QM +GV +P+ L SF G +A Sbjct: 1 MKDYLALNGQILYWTLLAPWRGQFFKI--GEVFHQMVLIGVRALPMASLTSFSIGLTLAM 58 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A QL + GA F DL+ + LRE+G LL AV++ GRSGSA+ AE+G+M+++EEI+A+ Sbjct: 59 QAAGQLRKMGASQFVPDLVILSLLRELGPLLVAVVVIGRSGSAVTAELGTMRVSEEIEAL 118 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M ++ +R LI PR A++I LP+LTI ++ ++G + D A + Sbjct: 119 EVMAINPIRFLIVPRFLAMMIMLPVLTIFGSYVGMVGGWSICHFALDYSTASYILHSFER 178 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A ++++GLIK+ A I +A G V + +G+ T VV S+ I++I ++ Sbjct: 179 ARPWDLYSGLIKSVVFAWIIITIACHMGLRVEGGAEGVGQATTGSVVWSLLIMLIANATL 238 Query: 365 AIFYF 369 +F Sbjct: 239 TALFF 243 >gi|290968738|ref|ZP_06560276.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] gi|290781391|gb|EFD93981.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] Length = 253 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 9/260 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG +++ + + + G I I QM +GV +P Sbjct: 3 VLECIGNRVLSLFSQVGAFTLLWGRTIRQL---------PNIKWHLTIYQMAKLGVDSLP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V L G V+ Q L ++GA+ MS+ RE+G +LT V++AGR G+A+ Sbjct: 54 IVSLTLLFAGMVMTLQIVDILLRYGAQSTLGGAMSVSMGRELGPILTGVVMAGRVGAAMT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+MK+ E+IDA+R + ++ + L+ PR A ++ +PLL G V Sbjct: 114 AEIGTMKVTEQIDALRCLAVNPIAYLVVPRFVACVLMVPLLAFYGYVIGTAGGYAVAVWG 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + + + + +I GLIKA F I ++A EGF + +G+ T Sbjct: 174 AGLAHFTYVNSIAVLTAVGDIVYGLIKAMFFGGIIAVIACYEGFHAESGAEGVGRATTKS 233 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV SI + I + + ++ + Sbjct: 234 VVTSIVFIFICNYILSVILY 253 >gi|163784036|ref|ZP_02178993.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1] gi|159880693|gb|EDP74240.1| hypothetical protein HG1285_11198 [Hydrogenivirga sp. 128-5-R1-1] Length = 248 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 117/243 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + E + + +I+Q+ +G P++I+ F TG V+ Sbjct: 4 LTVLLEHIGSITLLFLETLKFVFIKPPKIKHIIKQIAVIGADAAPLIIITGFFTGGVLVV 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + +F AE L+S+ RE+ +L A+++ RSGSA+ A IG+M+I E+IDA+ Sbjct: 64 ETYPTFHKFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTMRITEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + ++ VR LI+PRI A + +P LTIL+ S I G V + Y + +F + Sbjct: 124 EVLAVNPVRYLIAPRIIASVFVVPSLTILSIASGIAGGYFVATELYSVNSFMFIEKMKDL 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I G+ K+ + IV+ G+ + +G+ TT VV S +++I+D Sbjct: 184 TEFYDILGGIYKSIAFGVLLTIVSCYFGYVAKGGAEGVGRATTTAVVTSSVLILIVDYFL 243 Query: 365 AIF 367 Sbjct: 244 TAL 246 >gi|158521034|ref|YP_001528904.1| hypothetical protein Dole_1017 [Desulfococcus oleovorans Hxd3] gi|158509860|gb|ABW66827.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3] Length = 385 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 88/362 (24%), Positives = 160/362 (44%), Gaps = 2/362 (0%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +G ++ D+ + + + +DL+ IT +D G + F Sbjct: 21 GITIHVSGALTIDSHQSLSADLHKILERRQGACPIRLDLADITSVDDFGVLAVENFKSVA 80 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 K V Q L N P + + ++ +G ++ I Sbjct: 81 IQKGCGVVVVQVTGQAQRLFQLFSGIADLNAVPPHASASHGLLDVIPEVGNTVIGGIKRV 140 Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S +G ++ S F+ I + GV +P++ LI + G + A Sbjct: 141 DSSIAFVGSILFAFMRALFSPRSFRM--ADTIELIRRDGVDAIPIIGLIGIIIGLISAFV 198 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 + QL++ G +I+ +++ + EIG ++TA+++AGR+GSA AEIG+MKI+EE+DA+ Sbjct: 199 SSVQLTKLGGDIYIPAMITFAMVAEIGPMMTAIVVAGRTGSAYAAEIGTMKISEEVDALI 258 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +MG D L PRI AL++ LP+LT+ + A++G +V ++ + Sbjct: 259 SMGFDPTLFLAIPRITALVVVLPILTVCSVIFALLGGLVVCVTLLNLQMGPYLEGVSDAL 318 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++ L K+ A I ++ GF V + S+G T+ VV I +I+ DS+ A Sbjct: 319 FIDDVLWALAKSGIFALLIAVIGCLRGFQVRGGAASVGGAATSAVVTGIFFIILADSVVA 378 Query: 366 IF 367 + Sbjct: 379 LI 380 >gi|146302050|ref|YP_001196641.1| hypothetical protein Fjoh_4314 [Flavobacterium johnsoniae UW101] gi|146156468|gb|ABQ07322.1| protein of unknown function DUF140 [Flavobacterium johnsoniae UW101] Length = 252 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 115/243 (47%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I + +G F + ++Q Y +G +P+V + F+ G Sbjct: 1 MILSLKNTFAQIGNAALFANRFFKEVFIPPYETKEFLKQCYLIGYKSLPLVAITGFIMGL 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ Q L FGAE + ++++ +REI ++TA++ AG+ S I AE+GSMK+ E+ Sbjct: 61 VLTIQSRPTLVTFGAESWLPGMVALSLIREIAPVITALICAGKISSGIGAELGSMKVTEQ 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ ++ L+ RI A + +P+L I A+ IIG I + D+ F + ++ Sbjct: 121 IDAMEVSAINPYNYLVVTRILACTLMVPILVIFADAVGIIGGYAGINIHGDVNFYRYLTQ 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + +++ IK F IG++ +GF + S+G + VV + + II Sbjct: 181 IIQSLEFSDLIPATIKTFFFGYFIGMIGCYKGFNAANGTESVGHAANSAVVTASLSIFII 240 Query: 361 DSL 363 D + Sbjct: 241 DMV 243 >gi|85858103|ref|YP_460305.1| organic solvents resistance ABC transporter permease [Syntrophus aciditrophicus SB] gi|85721194|gb|ABC76137.1| ABC-type transport system involved in resistance to organic solvents, permease component [Syntrophus aciditrophicus SB] Length = 284 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 13/291 (4%) Query: 83 SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF 142 ++ + +++ +G+ ++ +IN+S G Sbjct: 1 MTVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNS-------GAAAIFLLLA 53 Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 ++ + L+ + +Q+YY+G +++L+ TG V+ Q L Q GAE L Sbjct: 54 ALKIFRPR-QLMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTL 112 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 +++ +RE+G +LTA+MI R+GSAI A+IG +I+E+IDA+ TM +D +R LISPRI A Sbjct: 113 VALSLIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAA 172 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 IIS P+LT L + I+G+ I FF R S+ ++++ G IKA A Sbjct: 173 AIISFPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAV 232 Query: 323 AIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + V +G+ + ++G T+ VV S ++++ D + Sbjct: 233 IVSTVCCYQGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLL 283 >gi|254442342|ref|ZP_05055818.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235] gi|198256650|gb|EDY80958.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 5/255 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I K S LG + + + + K + L R ++ +GV VP+ +++ Sbjct: 2 ISKIGRQSIRLVSELGELAGFSAQASVALPKQRHIFEKLSRAIFEIGVRCVPITLIVGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ Q + L++F +E +++ + EIG + TA+MI G++GSA+ AEIG + Sbjct: 62 TGLVLGLQLYYVLAKFSSESLLGQAVALSIILEIGPVFTAIMIVGQAGSALSAEIGIQRN 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ TM +D + L+SPR+WA II+ P+LT + I G + + + + Sbjct: 122 AEQIDALHTMQIDPIGFLVSPRLWAAIIAFPILTTFFDLIGIYGGYLTGVELLGVDPGAY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352 ++R + NI+ GLIKA ++ +G+ + + + T VV Sbjct: 182 WNRIFEAVSPQNIYNGLIKALAFGIITTLICAFQGYFTHIKADIPGARGVSQTTTRAVVY 241 Query: 353 SISIVIIIDSLFAIF 367 S +++ D L F Sbjct: 242 SSIAILMFDYLITSF 256 >gi|167645542|ref|YP_001683205.1| hypothetical protein Caul_1577 [Caulobacter sp. K31] gi|167347972|gb|ABZ70707.1| protein of unknown function DUF140 [Caulobacter sp. K31] Length = 268 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 119/254 (46%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + ++G V S + F +RQ+ +G +PVV L + Sbjct: 13 RPLRTIGRSTLGALRMVGGVGVFALRGVVSVFTPPWFASQFLRQLVAIGFFSLPVVGLTA 72 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TGA + +F AE ++++ RE+G +L A+M+AGR +AI AEIG+M Sbjct: 73 IFTGAALGLNIYTGGGRFNAEQVMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAM 132 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + E+IDA+RT+ D R L++PR+ A + LPLLT++A+ + G +V + D Sbjct: 133 RATEQIDAMRTLSTDPFRYLVAPRLLAATLVLPLLTLVADVIGVAGGWLVAVRILDFNST 192 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 V+ + ++ +GLIKA + ++ G+ + +G+ T VV S Sbjct: 193 VYIRNTANFIQGWDVGSGLIKAAVFGFIVALMGCYHGYNAKGGARGVGRATTHAVVSSAI 252 Query: 356 IVIIIDSLFAIFYF 369 ++ D + Sbjct: 253 LIFASDYFLTTLFT 266 >gi|220917185|ref|YP_002492489.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955039|gb|ACL65423.1| protein of unknown function DUF140 [Anaeromyxobacter dehalogenans 2CP-1] Length = 251 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 115/247 (46%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ G +I GE A +++ ++ QM ++G +V + G Sbjct: 1 MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q + L QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+ Sbjct: 61 VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM + ++ L+ PR+ A I+ P+LT+L N GA ++ IP F Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +IF GL KA + ++ G+A + +G+ T VV S +++ Sbjct: 181 TREFLGPNDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240 Query: 361 DSLFAIF 367 D + Sbjct: 241 DYAGTVL 247 >gi|57238787|ref|YP_179923.1| hypothetical protein Erum0570 [Ehrlichia ruminantium str. Welgevonden] gi|58578712|ref|YP_196924.1| hypothetical protein ERWE_CDS_00480 [Ehrlichia ruminantium str. Welgevonden] gi|58616774|ref|YP_195973.1| hypothetical protein ERGA_CDS_00470 [Ehrlichia ruminantium str. Gardel] gi|57160866|emb|CAH57768.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58416386|emb|CAI27499.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] gi|58417338|emb|CAI26542.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 265 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 112/250 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G F + + +Q + +P+V + + TG Sbjct: 16 SIGKYAIVLVFNIGDAFIFFIRFVYHCLCPPYYYCVIWKQFIEIFFFSLPIVGVTAIFTG 75 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+ Q A ++ + F ++ + +RE+G +L ++IAGR G++I AEIG+M+I E Sbjct: 76 AVLILQNALIINTNVSNDFIAGVVVVAIVRELGPVLIGLIIAGRVGASIAAEIGTMRITE 135 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ + + L+ PR+ A +IS+P+L + A+ G IV ++ Sbjct: 136 QIDALFTLNTNPFKYLVVPRVIAAMISMPILILCADLIGSYGGYIVGSFQLGCTPEIYIR 195 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ GLIKA I + G+ + +G T VV S ++I Sbjct: 196 GVMKFLHTRDVVLGLIKATVFGFIISFMGCYNGYYCSGGARGVGIATTYVVVISSMLIIF 255 Query: 360 IDSLFAIFYF 369 ++ + +FY Sbjct: 256 LNYIVTVFYS 265 >gi|94264494|ref|ZP_01288281.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|94266598|ref|ZP_01290280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|93452769|gb|EAT03307.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] gi|93455053|gb|EAT05280.1| Protein of unknown function DUF140 [delta proteobacterium MLMS-1] Length = 263 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 6/259 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + S LG + +K ++RQ +G + +PV+ + Sbjct: 5 RVERLGERSLYILGDLGRMGVFLLLAVGGLFKRPFRFAEVVRQTRLIGANSLPVIFFTAA 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+ QG + L QFGAE +++ +RE+G +LTA+M+ GR+GSA+ AEIG M+ Sbjct: 65 FTGMVLGLQGYYTLRQFGAESALGSAVALSLIRELGPVLTALMVIGRAGSAMCAEIGIMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 +E+IDA+ M +D R LI+P++ A +IS+PLLT++ N I G + + Sbjct: 125 NSEQIDALECMAVDPFRYLIAPKLLATMISIPLLTLIFNVVGIFGGYVAGVMLLGVNPGS 184 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV------HSNSLGKKVTTCV 350 +F+ + A+I G+IK+ A + + G+ V + + + T V Sbjct: 185 YFAGMEQSVVDADIRMGIIKSLVFALLVVWICTARGYYVHAIRGAGFGAEGVSRATTQAV 244 Query: 351 VQSISIVIIIDSLFAIFYF 369 V S V++ D L Sbjct: 245 VFSSISVLLFDYLLTAVLL 263 >gi|218885955|ref|YP_002435276.1| hypothetical protein DvMF_0852 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756909|gb|ACL07808.1| protein of unknown function DUF140 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 267 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 5/257 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G + + + + ++ Q++ +G + V++LI Sbjct: 11 VTALGAATLRLLGEMGAMFLFLADGLRLIFASPKQIPKILNQVFVIGSKSLFVILLIGVF 70 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+GS++ AEIG M+I Sbjct: 71 TGMVLGLQGYYTLVKFGSEGLLGAAVALSLIRELGPVLTAIMVTGRAGSSMAAEIGVMRI 130 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ M ++ + L++PRI A +IS PLLT + + I+G + I V+ Sbjct: 131 TDQIDALDVMDINPMAYLVAPRIAASLISFPLLTAIFDVVGILGGYVTGVTLLGINEGVY 190 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352 F R ++ +A+I G +K+ A + V+ +G+ + + T+ VV Sbjct: 191 FYRIQTSVEMADITGGFMKSVLFAVIVATVSCYQGYFTHMRRDGVGPEGVSNSTTSAVVL 250 Query: 353 SISIVIIIDSLFAIFYF 369 S V++ D + F Sbjct: 251 SCVFVLVADYVLTSFLL 267 >gi|197122403|ref|YP_002134354.1| hypothetical protein AnaeK_1997 [Anaeromyxobacter sp. K] gi|196172252|gb|ACG73225.1| protein of unknown function DUF140 [Anaeromyxobacter sp. K] Length = 251 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 115/247 (46%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ G +I GE A +++ ++ QM ++G +V + G Sbjct: 1 MLSRLRDAFEDFGRMILFAGEIVAWAFRPPFRPDQILAQMAFIGAGSAFIVGVTGTFAGM 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q + L QF AE ++ + RE+ + TA+M+ GR+GSAI E+G+M++ E+ Sbjct: 61 VFGLQMNYALRQFAAEGYTGGSTAFALARELSPVFTALMVTGRAGSAITTELGTMRVTEQ 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM + ++ L+ PR+ A I+ P+LT+L N GA ++ IP F Sbjct: 121 IDAMETMAVSPIQYLVVPRVVASILMFPVLTMLFNALGYGGAYVMGVFVSGIPEGPFIQH 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +IF GL KA + ++ G+A + +G+ T VV S +++ Sbjct: 181 TREFLGPDDIFHGLGKAVLFGYIVAVITTWRGYAASGGARGVGEGTTRAVVASSVAILVA 240 Query: 361 DSLFAIF 367 D + Sbjct: 241 DYAGTVL 247 >gi|152985726|ref|YP_001350363.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150960884|gb|ABR82909.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 265 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F LG G L L++Q+Y VGV + ++++ Sbjct: 8 ERVRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGAGLHLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++T ++ AGR+GSA+ AEIG+M Sbjct: 68 LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL + + I G ++V + + Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|171058394|ref|YP_001790743.1| hypothetical protein Lcho_1711 [Leptothrix cholodnii SP-6] gi|170775839|gb|ACB33978.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6] Length = 369 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 150/370 (40%), Gaps = 14/370 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G+W D + VD A+ D A + + Sbjct: 13 DGAGWTLILRGDW-------CGDAGTRLTPPPAAARQVSVDARALGAWDGGLAAALHQCL 65 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 H + + + S++ + + + IG ++ Sbjct: 66 APLHQRAVPLQLQDLPPGVRSVLELALSVVRVSAPERAAAPVG-----VAAIGHRLAISW 120 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + A G V+ G +G L RQ+ G VP+V L F+ G ++ Sbjct: 121 VECMATAAFFGEVLIALGRLLRGRSDLQGV--DLWRQVDQAGPLSVPIVSLTCFLVGLML 178 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A G QL + GA F D++++ +RE+ L+T V++AGR G+A A+IGSM+ EEID Sbjct: 179 AYMGGAQLHRIGAPSFIPDVVTVGMVRELAGLMTGVILAGRLGAAFAAQIGSMQAGEEID 238 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +G+D + L+ PR+ AL++ P+L + ++ Y + + + Sbjct: 239 ALRALGVDPIGYLVLPRLLALLLVAPMLVAIGMLVGVLAGLPAAVAAYGLSPTEYLHKSA 298 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + T +++ GL K + + +EG G + ++G TT VV+++ ++ Sbjct: 299 AALTWTHLWIGLFKGMMYLGLVALAGCREGLRAGRDAQAVGAATTTAVVKALVWIVAAAC 358 Query: 363 LFAIFYFAIG 372 + ++G Sbjct: 359 GSTVVLQSLG 368 >gi|15599651|ref|NP_253145.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107099960|ref|ZP_01363878.1| hypothetical protein PaerPA_01000981 [Pseudomonas aeruginosa PACS2] gi|116052487|ref|YP_792800.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218893546|ref|YP_002442415.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238883|ref|ZP_04932206.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719] gi|254244732|ref|ZP_04938054.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192] gi|296391165|ref|ZP_06880640.1| putative ABC transport system permease protein [Pseudomonas aeruginosa PAb1] gi|313107040|ref|ZP_07793243.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|9950690|gb|AAG07843.1|AE004859_12 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115587708|gb|ABJ13723.1| putative toluene tolerance ABC efflux transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126170814|gb|EAZ56325.1| hypothetical protein PACG_05051 [Pseudomonas aeruginosa C3719] gi|126198110|gb|EAZ62173.1| hypothetical protein PA2G_05604 [Pseudomonas aeruginosa 2192] gi|218773774|emb|CAW29588.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310879745|gb|EFQ38339.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 265 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F LG G L L++Q+Y VGV + ++++ Sbjct: 8 ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++T ++ AGR+GSA+ AEIG+M Sbjct: 68 LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL + + I G ++V + + Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|224373004|ref|YP_002607376.1| abc transporter, permease protein [Nautilia profundicola AmH] gi|223589585|gb|ACM93321.1| abc transporter, permease protein [Nautilia profundicola AmH] Length = 259 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 108/248 (43%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG + K + + Q+ ++G + V+ L SF TG V Sbjct: 10 GKSAIDFIEGLGKFTIFQLKLLPLFLKPPFRIRQIFEQINFMGFGSLGVIFLTSFFTGLV 69 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 A Q +FG E F + I +E+G + A+M+ R SA AE+GSM++ E+I Sbjct: 70 EAVQLYNGFHKFGVEDFMGYTIFISICKELGPVFAALMVVSRGISAYAAELGSMRVTEQI 129 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ M +D + LI PRI IISLPLL + + A IGA ++ D+ + Sbjct: 130 DALDVMAVDSKQYLIVPRIIGTIISLPLLILFFDAVANIGAYLISVYTLDVNGYTYIENI 189 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L + G++K I V G+ + +G T VV S ++ + D Sbjct: 190 KQFGELGDFTEGIVKGIVFGYLISAVGTYIGYNTRGGAKGVGVSTTKAVVISSILIFVAD 249 Query: 362 SLFAIFYF 369 + + FY Sbjct: 250 YIVSAFYL 257 >gi|49082890|gb|AAT50845.1| PA4455 [synthetic construct] Length = 266 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F LG G L L++Q+Y VGV + ++++ Sbjct: 8 ERIRLFGRAGLDVVAALGRSTLFLGHALLGRRTPGTGLHLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++T ++ AGR+GSA+ AEIG+M Sbjct: 68 LFIGMVLALQGYNILISYGSEQAVGQMVALTLLRELGPVVTGLLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL + + I G ++V + + Sbjct: 128 KATEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAAIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVQFTEDVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|329121164|ref|ZP_08249793.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|327470327|gb|EGF15786.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 253 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 2/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + S +G I E K K L +Q +GV+ P+V L Sbjct: 4 LENIGKYSLKVIAQIGATILLLIETLKKINKIK--LYETCKQCLLLGVNSFPIVFLTLLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V + Q +L ++GAE + +++I RE+G +L V++AGR G+AI AE+G+M++ Sbjct: 62 TGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAITAELGTMRV 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R M +D V L+ PR+ A +I LP+L + A + G IV +I ++ Sbjct: 122 TEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTIGVGGGMIVASVTGNISSHMY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + S ++++ G+IK F I + G + +GK T VV S+ ++ Sbjct: 182 WDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGITCETGAEGVGKATTQSVVYSMIMI 241 Query: 358 IIIDSLFAIFYF 369 I++ + + F Sbjct: 242 FIVNYILSTILF 253 >gi|294056022|ref|YP_003549680.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] gi|293615355|gb|ADE55510.1| protein of unknown function DUF140 [Coraliomargarita akajimensis DSM 45221] Length = 258 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 5/256 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I K + + H G + +G + + + L+ ++ +GV VP+V+++ Sbjct: 2 IRKLGQSALATVHEFGEMTVFSGMALSGFIQQRRRSQKLLSAIFEIGVRCVPIVLVVGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ Q + L + GAE D + + +RE+G +LTA+M+ G++GSA+ +E+G + Sbjct: 62 AGLVMGLQLYYTLVRLGAEAALGDAIGLSLVRELGPVLTALMVVGQAGSALASELGIQRN 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E+IDA++TMG++ L+ PR+WA +I P+LT L + I G + + V+ Sbjct: 122 DEQIDALQTMGIEPRGYLVGPRLWAALICFPMLTALFDLIGIYGGYLTGSVLLHVDSGVY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVVQ 352 ++ + + +++ G IKA + G+ + + T VV Sbjct: 182 WTHVYKSVQWDDVWGGFIKALVFGLLTISICSYRGYYTHLKSSFRGVRGVSQSATRAVVY 241 Query: 353 SISIVIIIDSLFAIFY 368 S V+ D L F Sbjct: 242 SSVAVLAADYLITSFL 257 >gi|224369296|ref|YP_002603460.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] gi|223692013|gb|ACN15296.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] Length = 269 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 125/259 (48%), Gaps = 6/259 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ +++ +G + L +I ++++G+ + V+IL Sbjct: 11 RVGALGSNTLDFVQGIGRAWLFLSQGLFQLLIPPFQLSKIIEHIWFIGMKSMMVIILTGI 70 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+ QG + L +FG+E +++ +RE+G +LTA+M+ R+GSA+ AE+G M+ Sbjct: 71 FTGMVLGLQGYYTLVRFGSEGMLGSAVALTLIRELGPVLTAIMVTARAGSAMAAELGVMR 130 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+++IDA+ TM ++ VR L +PRI A +IS PLLT L + I G + I + Sbjct: 131 ISQQIDALDTMDINPVRYLFTPRIIAAVISFPLLTALFDVIGIFGGYLTGSLMLGINSGI 190 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCV 350 + R + + ++ G +K+ + + V G+ G + + TT V Sbjct: 191 YLFRVEESVLMTDVTGGFVKSLVFSLVVTTVCCSRGYFTHLHRGGGFGAKGVSFSTTTAV 250 Query: 351 VQSISIVIIIDSLFAIFYF 369 V S +V++ D + Sbjct: 251 VNSCVLVLVCDYVITYLLL 269 >gi|313891881|ref|ZP_07825486.1| conserved hypothetical protein [Dialister microaerophilus UPII 345-E] gi|313119875|gb|EFR43062.1| conserved hypothetical protein [Dialister microaerophilus UPII 345-E] Length = 253 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 2/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + S +G+ I E K K L +Q +GV+ P+V L Sbjct: 4 LENIGKYSLKVIAQIGVTILLLIETLKKINKIK--LYETCKQCLLLGVNSFPIVFLTLLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V + Q +L ++GAE + +++I RE+G +L V++AGR G+AI AE+G+M++ Sbjct: 62 TGMVFSAQIVGELVKYGAEFTAGSIVAIGLGRELGPVLCGVVLAGRVGAAITAELGTMRV 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R M +D V L+ PR+ A +I LP+L + A + + G IV +I ++ Sbjct: 122 TEQIDALRCMAVDPVEYLVLPRVIACMIMLPILDVFAVTTGVGGGMIVASVTGNISSHMY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + S ++++ G+IK F I + G + +GK T VV S+ ++ Sbjct: 182 WDSITSFCVASDLYIGMIKTVFFGMIIALTGCDRGLTCETGAEGVGKATTQSVVYSMIMI 241 Query: 358 IIIDSLFAIFYF 369 I++ + + F Sbjct: 242 FIVNYILSTILF 253 >gi|124516678|gb|EAY58186.1| putative integral membrane protein [Leptospirillum rubarum] Length = 255 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 127/249 (51%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I G ++ T ++ + + Q+ VG PVV++ + TG Sbjct: 7 VGRKCIGLFSISGDLLITTVTALTGMFRPAFLWWNFLVQLVKVGADSTPVVLVTALFTGM 66 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q +F AE ++S+ RE+G ++T +M++GRSGS++ AE+G+M++ E+ Sbjct: 67 VLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQ 126 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ ++ + + L++PR +A +I+LPLLT++A+F I+G V +P V+ Sbjct: 127 IDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKG 186 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + ++GL+KA + I + G+ + +G+ VT VV S ++++ Sbjct: 187 IARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVL 246 Query: 361 DSLFAIFYF 369 D + F Sbjct: 247 DYFLTAWLF 255 >gi|325109134|ref|YP_004270202.1| hypothetical protein Plabr_2580 [Planctomyces brasiliensis DSM 5305] gi|324969402|gb|ADY60180.1| protein of unknown function DUF140 [Planctomyces brasiliensis DSM 5305] Length = 271 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 118/253 (46%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + G L +Y +GV +PVV++ G Sbjct: 15 LGELIVAPIAAAGDFALFAWATIRWLAIKWPRSSVLWPNLYQIGVLSLPVVMVTGGFIGM 74 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q QL E ++++ ++E+G +L A M+AGR GSAI AE+G+M++ E+ Sbjct: 75 VLAIQTYDQLRLMHMESHLGSVINLALVKELGPVLAATMLAGRVGSAIAAELGTMRVTEQ 134 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ +G D V+ L+ PR ++ +PLLTI+A+ ++ + I ++ Sbjct: 135 IDALEALGADPVQYLVVPRFLGCVLLIPLLTIVADTVGMLCGWLFSTSVLGINSYFYWHH 194 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ TL ++++G++K+ F AI +V+ GF + +G T V S ++ + Sbjct: 195 TYAYITLFDVYSGIMKSVFFGAAIALVSCHRGFQAKAGAEGVGTAATQTFVYSFVCILFL 254 Query: 361 DSLFAIFYFAIGI 373 D L + + I Sbjct: 255 DFLAGMLLSQVYI 267 >gi|91203173|emb|CAJ72812.1| similar to ABC-type transport system permease protein [Candidatus Kuenenia stuttgartiensis] Length = 258 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 126/249 (50%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G V + + L++++ G +V +I+ TG V+ Sbjct: 9 HTVKKFLLSMGQVTLLAFKGFWGIFLPPFNPKLLLKEIDNFGAGSFLLVNIIALFTGMVM 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q + L +GAE++ ++S+ +RE+G +LT++M+ R GS I AEIGSM++ E+ID Sbjct: 69 SLQTIYGLRMYGAEMYVGSVVSLSIVRELGPVLTSIMVGARIGSGIAAEIGSMQVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +G ++ L+SP+I+A +I+LPLLT+ A+F I G I+ DI + + Sbjct: 129 AMRALGASPIKKLVSPKIFAGLITLPLLTVTADFIGIFGGLIIATFELDIDHIFYINSIL 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +T T+++ +G+ K F I ++ G + +G+ T VV ++I D Sbjct: 189 TTITISDFISGIGKTVFFGLLIAVIGCYFGLKTSGGTTGVGRSTTISVVTISISILIADF 248 Query: 363 LFAIFYFAI 371 + I Sbjct: 249 FLTKLFLMI 257 >gi|78222008|ref|YP_383755.1| hypothetical protein Gmet_0788 [Geobacter metallireducens GS-15] gi|78193263|gb|ABB31030.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 257 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 127/259 (49%), Gaps = 7/259 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G + + L + + N + + +Q++++G Sbjct: 2 LRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFH-------IFKQIHFIGTK 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+ L + TG V+ QG + L++FG+E +++ +RE+G +LTA+M+ GR+GS Sbjct: 55 SLFVITLTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVVGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG MKI E+IDA++TM L+ + LISP+I ++++PLL + + I G +V Sbjct: 115 AITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVVGIYGGYLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 K + +F + ++++G +K+ + V +G+ + + + Sbjct: 175 VKLLGVNPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRAT 234 Query: 347 TTCVVQSISIVIIIDSLFA 365 T VV S +V++ D Sbjct: 235 TEAVVMSSVLVLVWDYFLT 253 >gi|126740431|ref|ZP_01756119.1| membrane protein [Roseobacter sp. SK209-2-6] gi|126718567|gb|EBA15281.1| membrane protein [Roseobacter sp. SK209-2-6] Length = 260 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 115/254 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + +G V ++ + ++ + VG +PVV L + Sbjct: 7 LARLGRMALGALAAIGRVTLFALSTFTHMFRPPYYPREVLLSLLQVGWLSLPVVGLTAVF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L++PR+ A ++++P+L + + I G V D A + Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALVTVPVLVGVGDIIGIAGGYTVAVYNLDFNSAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ + L+K F + G G + +G+ + V + ++ Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGTIAATMGCYYGMQSGRGAQGVGRATKSSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LAANFILTGVFFSL 260 >gi|326800463|ref|YP_004318282.1| hypothetical protein Sph21_3067 [Sphingobacterium sp. 21] gi|326551227|gb|ADZ79612.1| protein of unknown function DUF140 [Sphingobacterium sp. 21] Length = 254 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 121/243 (49%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG V F +I Q Y VGV +P++ L F+TG V Q Sbjct: 10 LIQLGNVHHFIMRFFKELVMPPYEFKEIINQCYEVGVKSLPLISLTGFITGIVFTNQSRP 69 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGA L++I +R + L+TA++ AG+ GS I AE+GSMK+ E+IDA+ G Sbjct: 70 SLEDFGATAMLPSLIAIAIVRALAPLVTALIAAGKVGSNIGAELGSMKVTEQIDAMEVSG 129 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ R+ A I +P+L+ F ++G+ + ++++ + F FF + T T Sbjct: 130 TNPFKFLVVSRVLATTIMIPILSCYTGFVGLMGSFLNVYQHESVSFISFFDQVFETVTFL 189 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +IF +IKA F IGIV +G+ + +GK VV S+ ++ I + L + Sbjct: 190 DIFQAIIKAAFFGFTIGIVGCYQGYNSSKGTEGVGKAANAAVVASMFLIFIEEQLVVMIV 249 Query: 369 FAI 371 +I Sbjct: 250 QSI 252 >gi|172039649|ref|YP_001806150.1| hypothetical protein cce_4736 [Cyanothece sp. ATCC 51142] gi|171701103|gb|ACB54084.1| DUF140-containing protein [Cyanothece sp. ATCC 51142] Length = 263 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 1/251 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L + G+ K K + + QM VG V + ++ + G V Sbjct: 9 RGLGIWFERLVAAVLLGGQVFFHLLKTKIHRRNTLEQMSVVGPESVTIALITAGFVGMVF 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+ID Sbjct: 69 TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ + D + L+ PR+ A + LP+L IL+ + + G ++ YDI VF + Sbjct: 129 ALYMLKTDPIDYLVVPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSVR 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L ++ T +IK+ I ++ G + +G+ TT VV S+ V +I+ Sbjct: 189 NFLELWDLVTSMIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248 Query: 363 LFA-IFYFAIG 372 + + + G Sbjct: 249 FLSWVMFQGTG 259 >gi|126657935|ref|ZP_01729088.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110] gi|126620875|gb|EAZ91591.1| hypothetical protein CY0110_13761 [Cyanothece sp. CCY0110] Length = 263 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 1/251 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L I G+ K K + + QM VG + + ++ + G V Sbjct: 9 RGLGIWFERLVAAILLGGQVFFHLLKTKIHRRNTLEQMSVVGPESLTIALITAGFVGMVF 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+ID Sbjct: 69 TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ + D + L+ PR+ A + LP+L IL+ + + G ++ YDI VF + Sbjct: 129 ALYMLKTDPIDYLVLPRVLACCLMLPVLNILSLLTGMTGGLLIANGLYDISPYVFLTSIR 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L ++ T +IK+ I ++ G + +G+ TT VV S+ V +I+ Sbjct: 189 NFLELWDLVTSVIKSIAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFVINF 248 Query: 363 LFA-IFYFAIG 372 + + + G Sbjct: 249 FLSWVMFQGTG 259 >gi|104780316|ref|YP_606814.1| toluene tolerance ABC efflux transporter permease [Pseudomonas entomophila L48] gi|95109303|emb|CAK14000.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas entomophila L48] Length = 265 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 136/256 (53%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F + +LG G + G L++Q+Y VGV + ++++ Sbjct: 8 ERIRLFGRSAIDVLAVLGRSCLFLGHALSGRGGIGGGFQLLVKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+ ++ + + ++ GLIK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWGNMQNSVSFSDDVINGLIKSLVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|303230190|ref|ZP_07316958.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] gi|302515116|gb|EFL57090.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] Length = 253 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ ++ +++ + +L I A +++QM ++GV + Sbjct: 2 NWLETIGRNVMAGLSNVGTAMLLLWQTIKQLKMLNAWH---------VLQQMAHLGVDSL 52 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P++ L G V+ Q L +GA+ LM++ RE+G +L V++AGR G+AI Sbjct: 53 PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+MK+ E+IDA+R M ++ + L+ PR+ A +I +P+L I G V Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATT 172 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + A + +T+++ GLIK+ I +V +G + + ++G T+ Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV SI +V +++ + F Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253 >gi|24375440|ref|NP_719483.1| hypothetical protein SO_3953 [Shewanella oneidensis MR-1] gi|24350284|gb|AAN56927.1|AE015826_12 conserved hypothetical protein TIGR00056 [Shewanella oneidensis MR-1] Length = 261 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 NIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|148263316|ref|YP_001230022.1| hypothetical protein Gura_1245 [Geobacter uraniireducens Rf4] gi|146396816|gb|ABQ25449.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 257 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N S + + + S + Q+ +GV + +VIL TG V+ Sbjct: 8 NTLKSFLLEVQEFFTLSLRAVRSIVSPPYYYRDFTTQLDKIGVGSLFIVILTGLFTGMVM 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + ++++ ++E+G +L+A+M+ GR GSAI AEIG+M + E+ID Sbjct: 68 ALQALIQLKPFAATSYVGGMVAVTMIKELGPVLSALMVTGRVGSAITAEIGTMVVTEQID 127 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D V+ L++ R+ A+++++PLLTI+ + +++G I+ YD+ +++ Sbjct: 128 AMRVEGTDIVKRLVTSRLKAILVAMPLLTIITDAISLLGGYIMS-ASYDMNPIMYWKSIP 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ G+ K F I ++ GF + +G VV S I+++ D Sbjct: 187 QFMVFQDLIEGVAKPAFFGFVIAMIGCHVGFNTRGGAEGVGASAKRAVVISSVIILVSDF 246 Query: 363 LFAIFY 368 + Sbjct: 247 FLTKIF 252 >gi|317485263|ref|ZP_07944144.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6] gi|316923554|gb|EFV44759.1| hypothetical protein HMPREF0179_01497 [Bilophila wadsworthia 3_1_6] Length = 265 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 5/246 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG E + + +++Q+Y +G + V+ LI+ TG V+ Sbjct: 15 FLRWIDALGDTFLFLLEGLRQIFIAPKLFIKVLQQLYVIGTKSLFVICLIALFTGMVLGL 74 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG + L +FG+ F +S+ +RE+G +LTA+M+ GR+GS++ AEIG M+I ++IDA+ Sbjct: 75 QGYYVLVKFGSVGFLGAAVSLTLIRELGPVLTAIMVTGRAGSSMAAEIGVMRITDQIDAL 134 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M + + L++PR A +I+ PLLT + + IIG + + +F S+ Sbjct: 135 EVMDIPGMGYLVAPRFVASLIAFPLLTAIFDVVGIIGGYLTGVLLLGVNEGAYFHGIESS 194 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQSISIVII 359 + ++ G IK+ A I ++ +G+ ++ T+ VV S V++ Sbjct: 195 VLMPDVTEGFIKSFVFALLIALICCYQGYNAHRRRDGMGPEAVANATTSAVVISCVFVLV 254 Query: 360 IDSLFA 365 D + Sbjct: 255 ADYVVT 260 >gi|218248789|ref|YP_002374160.1| hypothetical protein PCC8801_4068 [Cyanothece sp. PCC 8801] gi|257061848|ref|YP_003139736.1| hypothetical protein Cyan8802_4107 [Cyanothece sp. PCC 8802] gi|218169267|gb|ACK68004.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8801] gi|256592014|gb|ACV02901.1| protein of unknown function DUF140 [Cyanothece sp. PCC 8802] Length = 263 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 113/237 (47%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ K + + QM VG + + ++ + G V Q A + F Sbjct: 20 AAMLLGGQVFFHLLKTPIHRRNTLEQMSVVGPESLTIALVTAGFVGMVFTIQVAREFIHF 79 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA +++I RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + Sbjct: 80 GAASTVGGVLAIALTRELSPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYVLKTDPID 139 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LP+L ILA + + G ++ YDI +F + L +I T Sbjct: 140 YLVVPRVLACCMMLPVLNILALMTGMAGGLLIADSLYDISPDLFLKSARNFLELWDIVTS 199 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ I ++ G + +G+ TT VV S+ V I + + F F Sbjct: 200 LIKSAVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAVFIANFFLSWFMFQ 256 >gi|313896753|ref|ZP_07830301.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320530066|ref|ZP_08031136.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399] gi|312974670|gb|EFR40137.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320137499|gb|EFW29411.1| hypothetical protein HMPREF9555_01216 [Selenomonas artemidis F0399] Length = 255 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 1/254 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + +G V GE + + + S++ QM ++G + +V L Sbjct: 3 RILEAVGAFVLTHLANIGRVTLLYGETMRQVTR-RLRVRSIVYQMSHLGADSLLIVGLTL 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +M Sbjct: 62 LFTGVVLTLQTAHEFIRYGAQSTIGAVIAISIGRELGPVLVGVVCAGRVGAAITAEVSTM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+R M + V LI PR+ A + +P+LT+ + + G + Y I Sbjct: 122 KVTEQIDALRVMAVSPVNYLIVPRMLACMCVVPILTVFGDVIGVFGGYLTAVHYSGISAY 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F AT+ ++ GLIKA F I ++ G A + +GK VV SI Sbjct: 182 TFTHSITQFATIYDLTGGLIKAIFFGNVIAVLGCHYGLAAPNGAEGVGKATMQTVVTSII 241 Query: 356 IVIIIDSLFAIFYF 369 ++ I++++ F F Sbjct: 242 VIFILNAVLTFFLF 255 >gi|120600243|ref|YP_964817.1| hypothetical protein Sputw3181_3451 [Shewanella sp. W3-18-1] gi|146291827|ref|YP_001182251.1| hypothetical protein Sputcn32_0722 [Shewanella putrefaciens CN-32] gi|120560336|gb|ABM26263.1| protein of unknown function DUF140 [Shewanella sp. W3-18-1] gi|145563517|gb|ABP74452.1| protein of unknown function DUF140 [Shewanella putrefaciens CN-32] gi|319425062|gb|ADV53136.1| ABC phospholipid transporter, inner membrane subunit, MlaE [Shewanella putrefaciens 200] Length = 261 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWQKDILNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|302828760|ref|XP_002945947.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f. nagariensis] gi|300268762|gb|EFJ52942.1| hypothetical protein VOLCADRAFT_72591 [Volvox carteri f. nagariensis] Length = 348 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 116/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ +K + + Q+ VG + + V +L + G V Q + ++ Sbjct: 102 ACLVLGGQVVLRIFKGNIHWRNTVEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKL 161 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TA+++AGR GSA AE+G+M+++E++D++R + D V Sbjct: 162 GLTRSVGGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLFTDPVD 221 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PR+ A +I+ P+L +L + A ++ Y++P V T ++ T Sbjct: 222 YLVTPRVLASMIAGPILNVLCFCMGMGAAVLLADLVYNVPANVIVDSARRALTSYDVLTS 281 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 ++K+ + ++ GF + +G+ T+ VV S+ + I D + +F Sbjct: 282 MVKSWVFGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSFIFFQ 338 >gi|78222485|ref|YP_384232.1| hypothetical protein Gmet_1271 [Geobacter metallireducens GS-15] gi|78193740|gb|ABB31507.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 255 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 131/252 (51%), Gaps = 2/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + I+G ++ + + +LS+ QM +G +P+ +++F G Sbjct: 4 RVGKRVIAFNEIVGEMVMLLCQTVWFFREAPRNILSIFTQMSIIGYETLPMASVMAFFVG 63 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +L ++G + ++ + +RE+G ++T+ ++AGR+GSA+ AEIG MK+ E Sbjct: 64 MVLALQTGAELQKYGTQNIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMAAEIGVMKVYE 123 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY--YDIPFAVF 297 EIDA++T+ ++ VR L PR+ A +I +P L I A+F I+G +++ + I ++ + Sbjct: 124 EIDALKTLDINPVRYLAMPRLIACLICVPALVIYADFVGILGGALLSHLHPKIFISYSTY 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ L I GL+KA C IG+V+ GF + + + T VV S ++ Sbjct: 184 YDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTTRAVVLSFMLI 243 Query: 358 IIIDSLFAIFYF 369 + D Sbjct: 244 LAADYFLTRLLL 255 >gi|308272145|emb|CBX28752.1| UPF0393 membrane protein RBE_1340 [uncultured Desulfobacterium sp.] Length = 288 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 5/257 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + +G + + + F + +++Q++++G V V+ L Sbjct: 32 VTALGKWIIFVIQEMGRIAIFFSKSFYLMFSFPFQIKKILQQIHFIGSKSVFVICLTGAF 91 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG L +FG+ F ++++ +RE+G +L A+M+ GR+GSAI AE+G M+I Sbjct: 92 TGMVLGLQGYHTLVKFGSAGFLGAVVALSLIRELGPVLAAIMVTGRAGSAIAAEVGIMRI 151 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +EEIDA+ TM ++ +R L+SP++ A +IS+PLLT L + IIG I I ++ Sbjct: 152 SEEIDALDTMDINPLRFLVSPKLAAALISMPLLTALFDVVGIIGGYISGSLLLGISGGIY 211 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQ 352 FSR ++ +A++ G IK+ A I V +G+ G + + T+ VV Sbjct: 212 FSRIETSVEMADVTGGFIKSLVFAAVIVTVCCFQGYYTHTRKEGFGAKGVSLSTTSAVVI 271 Query: 353 SISIVIIIDSLFAIFYF 369 S ++I D + Sbjct: 272 SCVTILITDYVLTSLLL 288 >gi|320354123|ref|YP_004195462.1| hypothetical protein Despr_2023 [Desulfobulbus propionicus DSM 2032] gi|320122625|gb|ADW18171.1| protein of unknown function DUF140 [Desulfobulbus propionicus DSM 2032] Length = 272 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 6/260 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I + + + LG + K LI+Q+ ++G + V+ + Sbjct: 13 RLIGRMGDQAIYTLTDLGRMGIFLFFSLLGLLKRPFRFRELIKQVGFIGAGSLTVIFFTA 72 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ QG + L +FGAE +S+ + E+G +LTA+M+AGR+GSA+ AEIG M Sbjct: 73 LSTGMVLGLQGYYSLHKFGAEGMLGSAVSLSLIMELGPVLTALMVAGRAGSAMCAEIGIM 132 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I+E+IDA+ M +D R ISP++ A +IS+PLLT + I G + K + Sbjct: 133 RISEQIDALECMAIDPFRYFISPKLLATLISVPLLTAFFDVIGITGGYLAGVKLMGVNSG 192 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTC 349 FFS + T ++ G+IK+ A + + G+ V G + S+ K T Sbjct: 193 AFFSGMEQSVTNHDVRLGVIKSFVFALLVAWICTGRGYFVQTIRGAGFGAESVSKVTTQA 252 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV S V+I D L Sbjct: 253 VVMSSISVLIFDYLLTAVLL 272 >gi|256422329|ref|YP_003122982.1| hypothetical protein Cpin_3314 [Chitinophaga pinensis DSM 2588] gi|256037237|gb|ACU60781.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 245 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 126/243 (51%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + TG F + ++ IRQ + VG V +V + F+ G V+ Q Sbjct: 1 MEIVGDQVLFTGRFARNIFRGGFEWGEFIRQCFIVGYLSVGLVGITGFIIGLVMTLQTQP 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L FGAE + ++SI +REIG ++ A++ AG+ S+I AE+GSMK+ E+IDA+ Sbjct: 61 TLKDFGAESYVPGMVSISIIREIGPVIIALICAGKIASSIGAELGSMKVTEQIDAMEVSA 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + V+ L+ RI A I +PLLTI+A+ A++G + + + +FF + + Sbjct: 121 ANPVQYLVVTRILACTIMVPLLTIMADGLAMLGGWVGVNIQDHVSATLFFKKSFKALEFS 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ +IK F AIG V +G+ + S+GK + VV + +I+ID++ Sbjct: 181 DVVPSVIKTFFFGYAIGFVGCYKGYHSARGTESVGKAANSAVVSASLWIILIDAIAVQIT 240 Query: 369 FAI 371 I Sbjct: 241 NLI 243 >gi|238928172|ref|ZP_04659932.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|238884132|gb|EEQ47770.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] Length = 255 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G V+ GE + + + S+I QM ++G + +V L Sbjct: 5 LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIIYQMAHLGADSLLIVGLTLLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +MK+ Sbjct: 64 TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R M + V LI PR+ A ++ +P+LT+ + ++G Y I F Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 A + ++ GLIKA F I ++ G + +G VV SI ++ Sbjct: 184 LHSITQYAEIYDMTGGLIKAIFFGNVIAVLGCHYGLNAPGGAEGVGTATMQTVVTSIIVI 243 Query: 358 IIIDSLFAIFYF 369 I++++ F F Sbjct: 244 FILNAVLTFFLF 255 >gi|206603562|gb|EDZ40042.1| Putative integral membrane protein [Leptospirillum sp. Group II '5-way CG'] Length = 255 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 126/249 (50%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I G ++ T ++ + Q+ VG PVV++ + TG Sbjct: 7 VGRKCIGLFSISGDLLLTTVTALTGMFRPAFLWWNFFVQLVKVGADSTPVVLVTALFTGM 66 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A Q +F AE ++S+ RE+G ++T +M++GRSGS++ AE+G+M++ E+ Sbjct: 67 VLALQAWIGFQKFNAEGMVGAVVSLSLTRELGPVITGLMVSGRSGSSMAAELGTMRVTEQ 126 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ ++ + + L++PR +A +I+LPLLT++A+F I+G V +P V+ Sbjct: 127 IDALESLAVSPLVYLVTPRFYAGLIALPLLTVMADFVGIVGGYFVAVNLLGLPSNVYVKG 186 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + ++GL+KA + I + G+ + +G+ VT VV S ++++ Sbjct: 187 IARYVNLHDFYSGLVKACIFGAVLSIFSCYMGYHARGGAAGVGQSVTKAVVSSSMAILVL 246 Query: 361 DSLFAIFYF 369 D + F Sbjct: 247 DYFLTAWLF 255 >gi|312888063|ref|ZP_07747647.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311299544|gb|EFQ76629.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 256 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 130/255 (50%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + ++D+ G + TG F + K + + L+ Q Y +G P+V L F+ Sbjct: 1 MSLLSDTNDFLEQTGKISRFTGHFFSRGIKPRFEIKELLAQCYLIGYKSFPLVGLTGFIM 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+ Q L +G + ++ I +REIG ++TA++ AG+ GS+I AE+GSMK+ Sbjct: 61 GLVLTMQLRPSLVVYGVQSELPVMVGIAIVREIGPVITALIFAGKIGSSIGAELGSMKVT 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E+IDA+ G + + L++ R+ A + LP+LT+L + ++ GA I + FF Sbjct: 121 EQIDAMDVSGTNPFKYLVATRVVATTLMLPVLTLLGDAISLFGAYIGVNINAVTSVRFFF 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 ++ + T ++I +IK F A+GI+ +GF + +G + VV S ++ Sbjct: 181 TQVFQSLTYSDIVPAIIKTLFFGFAVGIIGCYKGFNSTKGTQGVGNSANSAVVLSSVVIF 240 Query: 359 IIDSLFAIFYFAIGI 373 +ID L +G+ Sbjct: 241 VIDLLTVQLTNLLGL 255 >gi|166363947|ref|YP_001656220.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843] gi|166086320|dbj|BAG01028.1| hypothetical protein MAE_12060 [Microcystis aeruginosa NIES-843] Length = 264 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ K + + QM VG + + ++ + G V Q A + Sbjct: 18 LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA F ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LPLLTI++ + ++G + Y I +++F + ++ Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLFISDSLYGISYSLFLQSAQNFLETWDLI 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370 + ++K+ I I+ G + +G+ TT VV S+ + + + + + + Sbjct: 198 SSMLKSLIFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQG 257 Query: 371 IG 372 G Sbjct: 258 TG 259 >gi|195952560|ref|YP_002120850.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] gi|195932172|gb|ACG56872.1| protein of unknown function DUF140 [Hydrogenobaculum sp. Y04AAS1] Length = 327 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 27/336 (8%) Query: 38 DSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 +D+ I ++DT GA ++ +EKY K +L G HIE + + K +K Sbjct: 19 KEHTIDIKDIEKLDTFGAIFVLELLEKYKDK-ELVGKKEHIEFIQKVKELLKYNNEKTKK 77 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 IN S + +G+++ ++ + S + Sbjct: 78 DSN---------------------INLSLTFLEYIGILVYHSFKNIKD-----IEFESFL 111 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 +++ G+ + ++ ++SF+ G VIA Q A +L FGA IF ++L+ I RE+G L+T Sbjct: 112 KEVESSGIGSLFILAVLSFLVGIVIAYQSANELISFGANIFIVNLIGISAFRELGPLITG 171 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 +++AGR S A IG + EEIDAI M + + PRI L + PLL + ++ Sbjct: 172 IILAGRVSSGYTANIGIRNVYEEIDAIEVMSISPYVVFGLPRIITLTLITPLLVLFSSNV 231 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++G +I+ DIPF +FF R +F GL+KAPF IG+V GF G Sbjct: 232 MVLGGAIIANTSLDIPFDMFFDRLREVVGFNQVFVGLVKAPFFGAYIGLVGTYFGFYSGK 291 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + V VV SIS +I+ID+LF+I + IGI Sbjct: 292 KPEDVTLNVMKSVVISISGIIVIDALFSIIFAKIGI 327 >gi|152999232|ref|YP_001364913.1| hypothetical protein Shew185_0693 [Shewanella baltica OS185] gi|160873845|ref|YP_001553161.1| hypothetical protein Sbal195_0723 [Shewanella baltica OS195] gi|217971905|ref|YP_002356656.1| hypothetical protein Sbal223_0714 [Shewanella baltica OS223] gi|304411204|ref|ZP_07392819.1| protein of unknown function DUF140 [Shewanella baltica OS183] gi|307306499|ref|ZP_07586242.1| protein of unknown function DUF140 [Shewanella baltica BA175] gi|151363850|gb|ABS06850.1| protein of unknown function DUF140 [Shewanella baltica OS185] gi|160859367|gb|ABX47901.1| protein of unknown function DUF140 [Shewanella baltica OS195] gi|217497040|gb|ACK45233.1| protein of unknown function DUF140 [Shewanella baltica OS223] gi|304350397|gb|EFM14800.1| protein of unknown function DUF140 [Shewanella baltica OS183] gi|306910790|gb|EFN41218.1| protein of unknown function DUF140 [Shewanella baltica BA175] gi|315266072|gb|ADT92925.1| protein of unknown function DUF140 [Shewanella baltica OS678] Length = 261 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G IV ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|327479601|gb|AEA82911.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri DSM 4166] Length = 265 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 LG + L++Q+Y VGV + +V++ G Sbjct: 13 LGRAGLDVLAALGRSTIFLVHVLFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGIFIGM 72 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK E+ Sbjct: 73 VLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMKSTEQ 132 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ +G+D ++ +I+PR+WA ISLPLLT++ N I G ++V + + F++ Sbjct: 133 LSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGSFWAN 192 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +++ G+IK+ A + +A+ +G+ S + + T VV + V+ Sbjct: 193 MQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASLAVLG 252 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 253 LDFILTALMFG 263 >gi|146281424|ref|YP_001171577.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri A1501] gi|145569629|gb|ABP78735.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas stutzeri A1501] Length = 265 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 LG + L++Q+Y VGV + +V++ G Sbjct: 13 LGRAGLDVLAALGRSTIFLVHALFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSGIFIGM 72 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK E+ Sbjct: 73 VLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNMKSTEQ 132 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ +G+D ++ +I+PR+WA ISLPLLT++ N I G ++V + + F++ Sbjct: 133 LSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEGSFWAN 192 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +++ G+IK+ A + +A+ +G+ S + + T VV + V+ Sbjct: 193 MQNSVDFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYASLAVLG 252 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 253 LDFILTALMFG 263 >gi|258645550|ref|ZP_05733019.1| toluene tolerance ABC efflux transporter, permease [Dialister invisus DSM 15470] gi|260402906|gb|EEW96453.1| toluene tolerance ABC efflux transporter, permease [Dialister invisus DSM 15470] Length = 253 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 2/249 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + H LG VI C + I+Q +GV P+V L TG Sbjct: 7 LGSKTIGLFHQLGAVILLLNSSCKELNHLR--FRETIKQCLDLGVLSFPIVALTLLFTGM 64 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ Q A +L+++GA +++I RE+G +L V++AGR G+AI AEIG+M++ E+ Sbjct: 65 VLSVQIAGELTKYGAGFTVGAIVAIGMGRELGPVLCGVVLAGRVGAAITAEIGTMRVTEQ 124 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R M + V L+ PR+ + + LP+LT+ + G IV + + VF Sbjct: 125 IDALRCMAVSPVGYLVLPRLLSCMAMLPILTVFGVSIGVFGGMIVASLTHGVSSYVFIHS 184 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++++ G++K+ + +V G + +G+ T VV SI ++ Sbjct: 185 IEVFCIPSDLYIGVMKSVVFGMIVALVGCDRGMTCEAGAEGVGRATTQSVVYSIIMIFAA 244 Query: 361 DSLFAIFYF 369 + L + F Sbjct: 245 NYLLSSILF 253 >gi|16330753|ref|NP_441481.1| hypothetical protein slr1344 [Synechocystis sp. PCC 6803] gi|1653246|dbj|BAA18161.1| slr1344 [Synechocystis sp. PCC 6803] Length = 283 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 67/249 (26%), Positives = 120/249 (48%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + S G I G + K + +Q+ +VG + +P+ ++ + V G + Sbjct: 24 LAELSSWLRRSGQAILLLGNTSFQLFTGKIDGRNTTQQLMFVGPASLPITLITAAVIGMI 83 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q A + FGA ++ + RE+ ++TAV++AGR GSA AEIG+M++ E+I Sbjct: 84 FTIQVAREFLAFGAGSAVGGILMLALGRELCPIMTAVVVAGRVGSAFAAEIGTMRVTEQI 143 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ + + V L+ PR+ A I +P L++LA + ++G +++ Y I VFF Sbjct: 144 DALYMLNTNPVEYLVIPRLLACCIMVPTLSVLALVTGMMGGAVISSNVYGIANQVFFESI 203 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + T +IF G +K I I+ G + +G+ T VV S+ + + + Sbjct: 204 QTFVTPWDIFCGPVKGIVFGVLIAIIGCNWGLTTRGGAKGVGESTTAAVVTSLLAIFVSN 263 Query: 362 SLFAIFYFA 370 L + F Sbjct: 264 FLMSWIMFQ 272 >gi|126175856|ref|YP_001052005.1| hypothetical protein Sbal_3661 [Shewanella baltica OS155] gi|125999061|gb|ABN63136.1| protein of unknown function DUF140 [Shewanella baltica OS155] Length = 261 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIANLGRSAIELVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIILVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G IV ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHIVGVEWKGIDSGA 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVIPNPEGISRATTQTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|302755016|ref|XP_002960932.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10 [Selaginella moellendorffii] gi|300171871|gb|EFJ38471.1| ATP-binding cassette transporter, subfamily I, member 10, SmABCI10 [Selaginella moellendorffii] Length = 342 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 115/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + + + + + ++Q+ VG + V +L + G V Q + ++ Sbjct: 95 ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TAV++AGR GSA AE+G+M+++E+ D +R +G D V Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI+PR+ A +++P LT++ + + ++ Y + + +I + Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK+ I IV+ G + +G+ T+ VV S+ + I D + + +F Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331 >gi|113969024|ref|YP_732817.1| hypothetical protein Shewmr4_0680 [Shewanella sp. MR-4] gi|114048831|ref|YP_739381.1| hypothetical protein Shewmr7_3342 [Shewanella sp. MR-7] gi|113883708|gb|ABI37760.1| protein of unknown function DUF140 [Shewanella sp. MR-4] gi|113890273|gb|ABI44324.1| protein of unknown function DUF140 [Shewanella sp. MR-7] Length = 261 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIELVLGFGRAGLMLWGAIVRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|117919131|ref|YP_868323.1| hypothetical protein Shewana3_0679 [Shewanella sp. ANA-3] gi|117611463|gb|ABK46917.1| protein of unknown function DUF140 [Shewanella sp. ANA-3] Length = 261 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + G + + L+RQ+Y VGV + ++++ Sbjct: 6 SIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKGIDGGA 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + + T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|193215278|ref|YP_001996477.1| hypothetical protein Ctha_1571 [Chloroherpeton thalassium ATCC 35110] gi|193088755|gb|ACF14030.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 265 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 121/243 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S ++ + + K + ++ Q Y G +P+V++ S G+++ Sbjct: 16 IKSFFLVMQEFFLFSLRTFTTIGAIKKYWRDILNQAYISGTESIPIVLVSSISIGSLLTM 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + QL +FGA++ + ++ +RE+G +LT +M++ R G+ +E+G+MKI+E+IDA+ Sbjct: 76 EVGNQLEEFGAKLMTGRTTALSVIRELGPMLTGLMLSARVGARNGSELGAMKISEQIDAL 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D + L+ PR+ A ++ LT L++F+ + +++ Y+ I +++ + Sbjct: 136 RAFGTDPIAKLVMPRLIASLLMFLPLTALSDFAGLTSGALIAEHYHHIDPGFYWNSVLNL 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + G +K P A I +V+ GF + +G+ +V S +V+I + Sbjct: 196 LIVKDFVVGFLKPPVFAVIITLVSCFNGFDATGGTAGVGRSTIKGIVVSSGLVLIANFYV 255 Query: 365 AIF 367 + Sbjct: 256 SKL 258 >gi|256828811|ref|YP_003157539.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] gi|256577987|gb|ACU89123.1| protein of unknown function DUF140 [Desulfomicrobium baculatum DSM 4028] Length = 263 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 S +G + + + ++ +Y++G + ++IL++F TG Sbjct: 11 LGATSLGIIKNVGQWGVFSLTAVLGMIHIRRLIPKILYDIYFIGFKSLNIIILVAFFTGM 70 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG + L +F AE +++ +RE+G +LTA+M+ GR+GS+I AEIG M+I+E+ Sbjct: 71 VLGLQGYYTLIKFSAEGMLGVAVALSLVRELGPVLTAIMLIGRAGSSISAEIGIMRISEQ 130 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TM +D VR L++P+I A +I PLLT + + I+G +FFS+ Sbjct: 131 IDALSTMDVDPVRYLVTPKIIASLICFPLLTAIFDCVGILGGYFSSVL-LSSRSGIFFSK 189 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355 S+ L+++ G IK+ A + ++ G+ + + T+ VVQS Sbjct: 190 IQSSLLLSDVTGGFIKSFVFAFIVITISCYCGYYTHQNQSSAGAEGVSNSTTSAVVQSCV 249 Query: 356 IVIIIDSLFAIFYF 369 V++ D + F Sbjct: 250 YVLVSDYVITSFLM 263 >gi|218782260|ref|YP_002433578.1| hypothetical protein Dalk_4431 [Desulfatibacillum alkenivorans AK-01] gi|218763644|gb|ACL06110.1| protein of unknown function DUF140 [Desulfatibacillum alkenivorans AK-01] Length = 268 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 12/273 (4%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 S F G+K + F+ + G + + + ++ Q Sbjct: 1 MSVFAGVVVEPVSATGRKTIAFVQEM-------GRMFIFLMHSVLHMFTLPFQFVKILTQ 53 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + +G + VV LI TG V+ Q L+ FG+E + ++E+G +L A+M Sbjct: 54 INIIGAQSLYVVSLIGLFTGMVLGLQLYNALANFGSEGMLGTSIVHTLIKEMGPVLAAIM 113 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 + R+GSA+ AEIG M+I+EEIDA+ TM ++ +R L+SPR+ A IIS PLLT L + A+ Sbjct: 114 VTARAGSAMAAEIGIMRISEEIDALDTMQINPIRFLVSPRLAAAIISFPLLTALFDVIAL 173 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV---- 335 G + K + A ++ ++ + +I G +KA A + V +G+ Sbjct: 174 FGGYLTGCKLKGLNDATYWYTVENSLVMEDINGGFLKAIVFAVIVITVCCYQGYTTHMRP 233 Query: 336 -GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G + + T+ VV S ++++ D + F Sbjct: 234 NGFGAKGVSASTTSAVVMSCVLILMADFVLTAF 266 >gi|302767312|ref|XP_002967076.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii] gi|300165067|gb|EFJ31675.1| hypothetical protein SELMODRAFT_169002 [Selaginella moellendorffii] Length = 342 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 115/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + + + + + ++Q+ VG + V +L + G V Q + ++ Sbjct: 95 ATLVIGGQVILRTLQGRIHVRNTVQQLEAVGPGSLGVNLLTASFVGMVFTIQFVREFAKL 154 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TAV++AGR GSA AE+G+M+++E+ D +R +G D V Sbjct: 155 GLTRSVGGVLALALARELSPVVTAVILAGRVGSAFAAELGTMQVSEQTDTLRVLGTDPVD 214 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI+PR+ A +++P LT++ + + ++ Y + + +I + Sbjct: 215 YLITPRVLACCLAMPFLTLMCFSVGMAASVLLADSVYRVSANIILDSAARALQPWDIVST 274 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK+ I IV+ G + +G+ T+ VV S+ + I D + + +F Sbjct: 275 MIKSFVFGGIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWCFFQ 331 >gi|115378323|ref|ZP_01465489.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] gi|115364677|gb|EAU63746.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 274 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 121/243 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +LG + TG + + + +L+ ++GV +P+ +L S G VI+ Sbjct: 28 VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 87 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q F L++FG + ++ + RE+ +LTA+ + R GS + AE+G+M + E++DAI Sbjct: 88 QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 147 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G D +R L+ PR+ A ++ +P LT+LA+ + ++V+ Y I F +FF Sbjct: 148 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 207 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + +G+IK IG+V +G V + +G+ T V + V + D Sbjct: 208 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 267 Query: 365 AIF 367 Sbjct: 268 TKI 270 >gi|91215888|ref|ZP_01252857.1| ABC transporter permease protein [Psychroflexus torquis ATCC 700755] gi|91185865|gb|EAS72239.1| ABC transporter permease protein [Psychroflexus torquis ATCC 700755] Length = 262 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 123/244 (50%), Gaps = 1/244 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + F LIRQ + +G +V + F+ G V Q Sbjct: 16 FFEEIGDMTYFAIRFFKEVVTSPFEWKELIRQCFQMGNRSFLLVGVTGFILGLVFTLQSR 75 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L +FGA + ++SI +REIG ++ A++ AGR GS+I AE+GSMK+ E+IDA+ Sbjct: 76 PTLLEFGAVSWMPSMVSISIVREIGPVIIALICAGRIGSSIGAELGSMKVTEQIDAMEVS 135 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G + + L+ RI A + LPLL I+ + A+ G++IV ++ + ++F++ Sbjct: 136 GTNPFKYLVVTRILATTLMLPLLIIMGDAVALFGSAIVENLMGEVSYLLYFNKVFDALKF 195 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++I IK+ F AIG+V +G+ + +G+ VV + ++ +ID + A+F Sbjct: 196 SDIIPATIKSFFFGFAIGLVGCYKGYNCSKGTVGVGEASNAAVVYTSMLLFVIDFI-AVF 254 Query: 368 YFAI 371 I Sbjct: 255 LTDI 258 >gi|67926111|ref|ZP_00519354.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501] gi|67852045|gb|EAM47561.1| Protein of unknown function DUF140 [Crocosphaera watsonii WH 8501] Length = 263 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 1/251 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L I G+ K K + + QM VG + + ++ + G V Sbjct: 9 RGLGIWFERLIAAILLGGQVFFHLLKTKIHRRNTLDQMSVVGPESLTIALITAGFVGMVF 68 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+ID Sbjct: 69 TIQVAREFISFGAASTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQID 128 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ + D V L+ PR+ A + LP+L IL+ + + G ++ YDI VF + Sbjct: 129 ALYMLKTDPVDYLVVPRVLACCLMLPVLNILSLITGMTGGLLIANGLYDISPYVFLTSIR 188 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L ++ T +IK+ I ++ G + +G+ TT VV ++ V +++ Sbjct: 189 NFLELWDLVTSVIKSVAFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLAVFVVNF 248 Query: 363 LFA-IFYFAIG 372 + + + G Sbjct: 249 FLSWVMFQGTG 259 >gi|225619573|ref|YP_002720830.1| ABC transporter permease [Brachyspira hyodysenteriae WA1] gi|225214392|gb|ACN83126.1| Ttg2B, ABC-type transport system, permease component [Brachyspira hyodysenteriae WA1] Length = 268 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 2/248 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG + E +++ L Q+ +GV V + TG V++ Q A Sbjct: 21 FLATLGEFATLMIEVFRYTFRPTFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80 Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L G F ++ ++E+ +L A++ AGR GS++ AEIG+M+++E++DA++ Sbjct: 81 VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+ + + + PR WA +ISLP+LT+ A+ ++G ++V +F R + Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSADVIGVLGGAVVTVFVLRSDPMHYFDRAIAVI 200 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + LIK+ + +++ GF + +GK TT VV S I++I D + Sbjct: 201 SVGDFIGSLIKSTIFGAEVMLISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260 Query: 366 IFYFAIGI 373 G+ Sbjct: 261 SILGMFGM 268 >gi|162448883|ref|YP_001611250.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] gi|161159465|emb|CAN90770.1| putative ABC transporter permease protein [Sorangium cellulosum 'So ce 56'] Length = 287 Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 111/245 (45%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 ++ LG T S + + S + QM +GV + + + G V+ Sbjct: 35 ENAVGFVEHLGQFGRMTWGALRSMVERPLEIRSTLYQMEALGVRSAAIASVTALFVGMVM 94 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q A L +FG ++ ++ + RE+ LTAV++ GR G+ I AE+GSM + E+ID Sbjct: 95 AVQFAIGLQKFGGMEYTGRIIGLSFSRELAPTLTAVIVGGRIGAGIAAEVGSMAVTEQID 154 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 AIR +G ++ L+ PR+ A I+ +P+L A GA +V + IP F Sbjct: 155 AIRALGASPLKKLVLPRLLASIVVMPVLGAFALVLGFGGAMLVCATEFGIPAGFFLRTAL 214 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + T + F+G+ K PF I +V G + +G T VV + ++I D Sbjct: 215 GSVTFMDYFSGMYKTPFFGAIIALVGCHFGLITRGGTEGVGHATTRTVVVTSITILIADF 274 Query: 363 LFAIF 367 Sbjct: 275 FLTKM 279 >gi|303230959|ref|ZP_07317702.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302514341|gb|EFL56340.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] Length = 253 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 9/261 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG+ ++ +++ + ++ I A +++QM ++GV + Sbjct: 2 NWLEVIGRNVIAGLSNVGTAMLLVWQTIKQLKMLNAWH---------VLQQMAHLGVDSL 52 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P++ L G V+ Q L +GA+ LM++ RE+G +L V++AGR G+AI Sbjct: 53 PIISLTLLFAGGVMTLQITDVLITYGAQGTVGGLMAVAMGRELGPILVGVVLAGRVGAAI 112 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG+MK+ E+IDA+R M ++ + L+ PR+ A +I +P+L I G V Sbjct: 113 TAEIGTMKVTEQIDALRVMAVNPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATA 172 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + A + +T+++ GLIK+ I +V +G + + ++G T+ Sbjct: 173 IKGLAPATYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGCYKGMHTKMGAEAVGFSTTS 232 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV SI +V +++ + F Sbjct: 233 SVVTSIILVFVLNYFLSTLLF 253 >gi|108761216|ref|YP_628530.1| putative ABC transporter permease [Myxococcus xanthus DK 1622] gi|108465096|gb|ABF90281.1| putative ABC transporter, permease protein [Myxococcus xanthus DK 1622] Length = 250 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 118/243 (48%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + TG+ + + + L+ +GV +P+ +L + G VI+ Q + Sbjct: 8 LESLGALSRMTGQVFSRAVRPPFDWRGLVYHTESLGVRSLPIALLTAMFAGLVISLQFGY 67 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 LS+FG + ++ + RE+ +LTA+ + R GS I AE+G+M + E++DAIR +G Sbjct: 68 FLSRFGVQYTVGRVVILTLFRELAPVLTALTVGARIGSGIAAELGAMTVTEQVDAIRALG 127 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D +R L+ PR+ A +I LP+LT+ A+ ++ ++V+ Y I +FF + Sbjct: 128 ADPLRKLVVPRVLACLIVLPVLTVFADVVGLVAGALVVNIQYAITLNLFFQGALDAVLMP 187 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G+ K IG+V G V + +G+ T V + V + D Sbjct: 188 DFASGVFKGAVFGLIIGLVGCFRGLTVEGGTEGVGRATTQTVATTSVSVCLADFFITQLT 247 Query: 369 FAI 371 ++ Sbjct: 248 LSL 250 >gi|22298988|ref|NP_682235.1| hypothetical protein tlr1445 [Thermosynechococcus elongatus BP-1] gi|22295170|dbj|BAC08997.1| ycf63 [Thermosynechococcus elongatus BP-1] Length = 267 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 120/239 (50%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ + + L +LI QM VG + + V ++ + G V Q A + Sbjct: 20 LGTALLLGGQVIYRVLRGRIALRNLIEQMALVGPASLSVALITAAFVGMVFTIQVAREFI 79 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA +++I RE+G +LTAV++AGR GSA AEIG+MK+ E+IDA+ +G + Sbjct: 80 AFGATSAVGGVLAIALARELGPVLTAVVLAGRVGSAFAAEIGTMKVTEQIDALYMLGTNP 139 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR A ++ LP+L ILA + + G I+ Y IP V+ + +++ Sbjct: 140 VDYLVVPRFIACVVMLPILNILALVTGLWGGLIIGDYLYGIPPGVYIESIQNFLQTWDLW 199 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +IK+ + I+ G + +G+ T VV S+ + I++ + F Sbjct: 200 SSIIKSGIFGGVVAIIGCSWGITTTGGAKGVGQSTTAAVVISLLAIFILNFFLSWALFG 258 >gi|255533344|ref|YP_003093716.1| hypothetical protein Phep_3461 [Pedobacter heparinus DSM 2366] gi|255346328|gb|ACU05654.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366] Length = 244 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190 G + KFK +L ++ +QM ++GV + ++ +IS GAV+ Q AFQL Sbjct: 6 FGRYLLLLKAVFRRPEKFKIYLKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S F + + + E+ ++A+++AG+ GSAI +EIG+M+++E+IDA+ MG++ Sbjct: 66 SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I A I +PLL I++ F +I G I + A + + I Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSPAEYIQGITTDFNPYTI 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+KA I V EGF V + + + T VV S ++ D + Sbjct: 186 TVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCISILACDYIVTQLLL 244 >gi|163739574|ref|ZP_02146983.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis BS107] gi|163741440|ref|ZP_02148831.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161385174|gb|EDQ09552.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161387033|gb|EDQ11393.1| hypothetical protein RGBS107_12532 [Phaeobacter gallaeciensis BS107] Length = 266 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 116/254 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + +G V + + + L+ + VG +PVV L + Sbjct: 13 LARLGQMVLAGLGAVGRVTLFGLSTFSHMLRPPYYPRELLNALLQVGWLSLPVVGLTAIF 72 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 73 TGAALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L++PR+ A +I++P+L + + I+G +V + A + Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 L +I + L+K + G G + +G+ V + ++ Sbjct: 193 LKNTVDFLELRDIVSSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 253 LAANFVLTGIFFSL 266 >gi|73666683|ref|YP_302699.1| hypothetical protein Ecaj_0050 [Ehrlichia canis str. Jake] gi|72393824|gb|AAZ68101.1| protein of unknown function DUF140 [Ehrlichia canis str. Jake] Length = 265 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 120/263 (45%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 F LH + + + +G +F + + + + +Q + Sbjct: 3 FLRLHLGLFWLLETVGKYVINLIFNIGHSFVFFVKFVCNCFMPPYYYGVIFKQFIEIFFF 62 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+V + + TGAV+ Q + + + F ++ + +RE+G +L ++IAGR G+ Sbjct: 63 SLPIVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGA 122 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+M+I E+IDA+ T+ + + LI PRI + +I++PLL + A+ G IV Sbjct: 123 AIAAEIGTMRITEQIDALFTLDTNPFKYLIVPRIISAMIAMPLLILCADLIGAYGGYIVG 182 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 ++ + ++ GLIKA I + G+ + +G Sbjct: 183 SYQLGYTPEIYVRGIMKFLHVKDVILGLIKATVFGFIISFMGCYSGYYCSGGARGVGMAT 242 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T VV S +I+++ + +FY Sbjct: 243 TYVVVVSSMFIILLNYVITVFYS 265 >gi|116749878|ref|YP_846565.1| hypothetical protein Sfum_2450 [Syntrophobacter fumaroxidans MPOB] gi|116698942|gb|ABK18130.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 266 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 2/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + F+ S A++ + + L + + QM VGV +P+V L+SFV Sbjct: 14 TILFLRHLTSIAYLFRDTMRWAIVKPLQGKPLR--LRAALIQMDEVGVKSIPIVALVSFV 71 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G ++ Q A+QL +FGA ++ L + RE+ LLTA+++AGR +A AE+G+M + Sbjct: 72 IGIILVLQTAYQLEKFGAINYAASLAGVALTREMAPLLTAIVVAGRVSAAFTAELGTMLV 131 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEI A+ M ++ V L+ PR A+++ LP LT+LA+ +IG V I +++ Sbjct: 132 TEEILALEVMAINPVAYLVVPRFIAMLVMLPCLTVLADLIGMIGGYAVGTTAVGIRSSLY 191 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 L +I TGL K+ A I +V F V + +GK VV S+ + Sbjct: 192 IQNTIDALLLKDILTGLTKSVVFAGIIAMVGCYMAFVVRGGAEGVGKATMISVVTSLISI 251 Query: 358 IIIDSLFAIFYF 369 I+ D F ++ Sbjct: 252 ILADCFFTTVFY 263 >gi|297569270|ref|YP_003690614.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] gi|296925185|gb|ADH85995.1| protein of unknown function DUF140 [Desulfurivibrio alkaliphilus AHT2] Length = 264 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 6/259 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + + LG + A +K L +IRQ+ +G + +PV+ + Sbjct: 6 NIERVGERTLYVVGDLGRMGGFLARALAGLFKRPFRLAEVIRQIRLIGANSLPVIFFTAA 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+ QG + L +FGAE ++++ +RE+G +LTA+M+ GR+GSA+ AEIG M+ Sbjct: 66 FTGMVLGLQGYYTLRKFGAEGALGTMVALSLVRELGPVLTALMVIGRAGSAMCAEIGIMR 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 +E+IDA+ M +D R LI+P+ A +IS+PLLT++ N I G + + Sbjct: 126 NSEQIDALECMAVDPFRYLIAPKFLATVISIPLLTMIFNVVGIFGGYLAGVVLLGVNAGS 185 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCV 350 +F+ + +I G IK+ + + G+ V G + + T V Sbjct: 186 YFAAMEQSVLAQDINMGFIKSLVFGLLVVWICSGRGYFVHQIRGAGFGAEGVSCATTQAV 245 Query: 351 VQSISIVIIIDSLFAIFYF 369 V + V++ + L Sbjct: 246 VLASISVLLWNYLLTAILL 264 >gi|297171834|gb|ADI22824.1| ABC-type transport system involved in resistance to organic solvents, permease component [uncultured Oceanospirillales bacterium HF0500_29K23] Length = 260 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 124/249 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG V + S + + L+ Q++++GV VV+L TG V+ Sbjct: 9 LKDAFAGLGSVTVLFLDTVRSIFAKRFRGRDLVEQLHFIGVKSQSVVLLTGAFTGMVMCA 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q + + + ++++ RE+G +LT++MIAGR G+A+ A++G+MK+ E+IDA+ Sbjct: 69 QFYIQFHKVKMDSAVMSVVTVAMARELGAVLTSLMIAGRVGAAMAAQLGTMKVTEQIDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 RT+ V L++PR+ A++ISLPLLT A +++ +V + +S Sbjct: 129 RTLATSPVDYLVAPRLLAMLISLPLLTAEAIAISMVSGMLVAVYLLGLDPVFLWSNMVFY 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +I+ GLIKA A I VA +G G + +GK T VV + +++ + Sbjct: 189 TGSVDIWMGLIKAFIFAGIIATVACHKGMHCGQGAEGVGKATTEAVVAASISILVSNFFV 248 Query: 365 AIFYFAIGI 373 + + I Sbjct: 249 TLVLNNLLI 257 >gi|312890492|ref|ZP_07750028.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311296950|gb|EFQ74083.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 3/245 (1%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + F + + +RQ Y +G + +V + SF+ G V+ Q Sbjct: 12 LMEEVGEQATFFTGFFRNLFTGGFEWSEFVRQCYEIGYRSITLVGITSFIMGVVLTLQSR 71 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L +FGA ++ + +REIG ++TA++ AG+ S I AE+GSMK+ E+IDA+ Sbjct: 72 PTLVKFGASSMLPFMVCVSIIREIGPVITAIICAGKISSGIGAELGSMKVTEQIDAMEVS 131 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G + ++ L+ RI A I +P+LT++ + + G + + + ++F++ S+ Sbjct: 132 GANPMQYLVVTRILATTIMIPILTLMGDVLGLFGGFLAVHFADHTSWQLYFNKCVSSVDF 191 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL---F 364 +++ +IK F A+G + +GF + S+G + VV + + +D + Sbjct: 192 SDLLPAVIKTVFFGFAVGFIGCYKGFNSNRGTESVGIAANSAVVSASLWIFFLDVIAVQI 251 Query: 365 AIFYF 369 +F Sbjct: 252 TQLFF 256 >gi|89068948|ref|ZP_01156330.1| membrane protein [Oceanicola granulosus HTCC2516] gi|89045529|gb|EAR51593.1| membrane protein [Oceanicola granulosus HTCC2516] Length = 258 Score = 185 bits (471), Expect = 8e-45, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 115/253 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + +G ++ E + + + + VG +PVV L +F Sbjct: 5 LARIGAATLALLAGIGRMVIFVAETLSHLVRPPFYAREFGHAVMSVGWQSLPVVGLTAFF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE ++++ +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 65 TGGALALQIYSGGARFSAEALVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+ T+ + ++ L PR+ A ++++P+L + + I G +V D A + Sbjct: 125 TEQLDALVTLSTNPMKYLTLPRVLAALLTVPVLVAVGDVIGIFGGYLVGIYRLDFNPANY 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ + L+K + G + +G+ T VV + ++ Sbjct: 185 ITNTVDFLEAHDVISSLVKGGAFGLIAALTGCYYGMQSDRGAQGVGRATKTAVVVAAVLI 244 Query: 358 IIIDSLFAIFYFA 370 + + L +F+ Sbjct: 245 LAANFLLTEAFFS 257 >gi|186684391|ref|YP_001867587.1| hypothetical protein Npun_R4269 [Nostoc punctiforme PCC 73102] gi|186466843|gb|ACC82644.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102] Length = 265 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 1/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 I G+ + K + + QM VG + + +L + GAV Q A + F Sbjct: 19 AAIFLGGQVLVHLLRGKIHRRNTLEQMAAVGPDSLFIALLTAIFVGAVFTIQVAREFINF 78 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA ++SI RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + Sbjct: 79 GAGNIIGGVLSIALTRELSPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPID 138 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LP+LT+L+ + + G I+ Y++ VF + + +I + Sbjct: 139 YLVIPRVIACCLMLPILTLLSLITGMFGGFIIATNVYNLSDTVFLDSARNFLGIWDIISA 198 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 ++KA I ++ G + +G+ TT VV ++ I+ + + + + + +G Sbjct: 199 MLKAFCFGILIAVIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFVSNFFLSWLMFQGLG 258 >gi|260433527|ref|ZP_05787498.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417355|gb|EEX10614.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] Length = 260 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 112/254 (44%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + G V + + ++ + L + +G +PVV L + Sbjct: 7 LAELGRAVLNLLAAFGRVTLFALDALSHIFRPPFYPRELGMALLNIGWLSLPVVGLTTIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G ++ +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVMVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L +PR+ A +I++P L + + I G V + A + Sbjct: 127 TEQIDALVTLSTHPMKYLTAPRVLAALITVPALVAVGDIIGIAGGYAVATQNLGFNPAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I + L+K I+ G G + +G+ + V + ++ Sbjct: 187 LKNTVDFLEPLDILSSLVKGAAFGMIAAIMGCYFGMNSGRGAQGVGRATKSSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LAANFVLTGVFFSL 260 >gi|254476887|ref|ZP_05090273.1| membrane protein [Ruegeria sp. R11] gi|214031130|gb|EEB71965.1| membrane protein [Ruegeria sp. R11] Length = 266 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 113/254 (44%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G V + + + ++ + VG +PVV L + Sbjct: 13 LARLGQMVLGALGAVGRVAIFGLSTFSHMVRPPYYPREVLNALLQVGWLSLPVVGLTAIF 72 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 73 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 132 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L++PR+ A ++++P+L + + I+G +V + A + Sbjct: 133 TEQIDALVTLSTHPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATQNLGFNPAAY 192 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I + L+K + G G + +G+ V + ++ Sbjct: 193 LKNTVDFLEARDIISSLVKGAAFGTIAATMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 252 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 253 LAANFVLTGVFFSL 266 >gi|296125262|ref|YP_003632514.1| hypothetical protein Bmur_0208 [Brachyspira murdochii DSM 12563] gi|296017078|gb|ADG70315.1| protein of unknown function DUF140 [Brachyspira murdochii DSM 12563] Length = 268 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 2/248 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG E +++ L Q+ +GV V + TG V++ Q A Sbjct: 21 FLATLGEFAFLIIEVFRYTFRSSFSFKLLKEQIIRMGVDSFVVAAVTVLCTGMVMSLQIA 80 Query: 188 FQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L G F ++ ++E+ +L A++ AGR GS++ AEIG+M+++E++DA++ Sbjct: 81 VVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLDALK 140 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+ + + + PR WA +ISLP+LT+ AN ++G +IV +F R + Sbjct: 141 TLYTNPIEYVAVPRFWAAVISLPMLTVSANIIGVVGGAIVTVFVLHSDPMHYFDRAIAVI 200 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ + LIK+ + I++ GF + +GK TT VV S I++I D + Sbjct: 201 SVGDFIGSLIKSTIFGAEVIIISCFYGFRTSGGAEGVGKATTTSVVYSFMIILITDYILV 260 Query: 366 IFYFAIGI 373 G+ Sbjct: 261 SILGLFGM 268 >gi|330807561|ref|YP_004352023.1| putative ABC transporter, membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375669|gb|AEA67019.1| putative ABC transporter, membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 265 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F +LG G L++Q++ VGV + ++++ Sbjct: 8 ERVRLFGRSGIDVVAVLGRSSLFLMHALLGRNSTGGGFGLLVKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA ISLP+L I+ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAIIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S ++ ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWSNMQNSVDFLDDVLNGVIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|127514231|ref|YP_001095428.1| hypothetical protein Shew_3303 [Shewanella loihica PV-4] gi|126639526|gb|ABO25169.1| protein of unknown function DUF140 [Shewanella loihica PV-4] Length = 261 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + LG A + + LI+Q+Y +GV + ++++ Sbjct: 7 IARLGRGAIDSVTGLGRAGLMLWGAIAKIPRVRKGTPLLIKQLYVIGVQSMVIILVSGLF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 67 IGMVLALQGYNILVGFGTEDSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKS 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +ISLPLL ++ I G +V ++ I F Sbjct: 127 TEQLSSLEMMAIDPLRQVIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGSF 186 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I LIK+ A + +A+ G+ V + + + T VVQS Sbjct: 187 WSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLA 246 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 247 VLALDFLLTAMMFG 260 >gi|117618508|ref|YP_858369.1| putative ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559915|gb|ABK36863.1| putative ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 259 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + K +G A + L++Q+Y VGV V ++++ Sbjct: 6 VSKLGRSGVRFISAIGRATIMLFHALAGKPAPRKHFPLLVQQLYVVGVQSVAIILVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +++PR WA +IS+PLL + + I G +V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I G IK+ A + +A+ G+ S + + T VV S Sbjct: 186 WSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFILTAVMFG 259 >gi|159029293|emb|CAO90159.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 264 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 1/242 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ K + + QM VG + + ++ + G V Q A + Sbjct: 18 LGAAGLLAGQTFLHILNGKIHRRNTLEQMSIVGPESLTIALITAAFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA F ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 FFGAGSFVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYILKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LPLLTI++ + ++G ++ Y + +++F + ++ Sbjct: 138 IDYLVIPRVIACSLMLPLLTIISLVTGLLGGLLISDSLYGVSYSLFLQSAQNFLQTWDLI 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370 + ++K+ I I+ G + +G+ TT VV S+ + + + + + + Sbjct: 198 SSMLKSLIFGILIAIIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVANFFLSWLMFQG 257 Query: 371 IG 372 G Sbjct: 258 TG 259 >gi|330991860|ref|ZP_08315809.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] gi|329760881|gb|EGG77376.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] Length = 382 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 80/371 (21%), Positives = 151/371 (40%), Gaps = 8/371 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E T+ +GNW + I + + + D + DT + Sbjct: 20 EANRTLVTLSGNW-IAQEGRIPAFPETGLKDVPRGAALEFDTGRLGRWDTSLISFLWELK 78 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + T E L+ + P F +G+ + + Sbjct: 79 RSAREAHVDVHIDTLPESAHKLLDLLPEIPPEPAPPTPHHFAP-----VAAVGQFTLDTL 133 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N+ + + + L+ + G + + +V +++F+ GA++ Sbjct: 134 NEIGCVSEMGAAAARGGIAALVGRGMMRTV--DLMSDLAAAGPAALLIVGVVNFLVGAIL 191 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A G+ +L +F A+I+ L++I +RE+ ++TA+++AGR+G A A I +M+ NEEID Sbjct: 192 AFVGSVELHKFAADIYVASLVAIAMVREMSAVMTAIIMAGRTGGAYAARISTMQANEEID 251 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ G+ LI P + AL ++PLL + ++G +V + + +F Sbjct: 252 ALQVFGIPVASYLILPSVLALGFTMPLLYLYGCLIGMLGGFVVSFIMLHVSPLGYFHETL 311 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L G IK+ +G+ + + G G + +G T VV I VI +D+ Sbjct: 312 QALPLDQFTFGFIKSLVFGTFVGLTSCRIGLKAGRSAADVGIAATKAVVVGIVGVIALDA 371 Query: 363 LFAIFYFAIGI 373 +FA+ IGI Sbjct: 372 VFAVIANVIGI 382 >gi|170723417|ref|YP_001751105.1| hypothetical protein PputW619_4256 [Pseudomonas putida W619] gi|169761420|gb|ACA74736.1| protein of unknown function DUF140 [Pseudomonas putida W619] Length = 265 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I F + +LG G L +Q+Y VGV + +V + Sbjct: 8 ERIRLFGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVAVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|148552943|ref|YP_001260525.1| hypothetical protein Swit_0014 [Sphingomonas wittichii RW1] gi|148498133|gb|ABQ66387.1| protein of unknown function DUF140 [Sphingomonas wittichii RW1] Length = 264 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 118/248 (47%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G V + + + + L Q+ +G +PVV + + +G Sbjct: 14 SIGRLFIAALAAIGRVTVFAATTISRAVRPPYYPSRLFEQLMQIGWFSLPVVGMTAIFSG 73 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A +AQQ S+F A ++ + +RE+G +L +M+AGR SA+ AE+G+M++ E Sbjct: 74 AALAQQTFTAGSRFNATSTVPAIVVLGIVRELGPVLVGLMVAGRVSSAMAAELGTMRVTE 133 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++DA+ T+ D R LI+PR++A +I++PL+ ++AN I G V + Sbjct: 134 QLDALTTLRTDPYRYLIAPRLFAALIAIPLMVLVANAIGIFGGYFVAVYKLGFNAVGYLD 193 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 T ++ L+K+ F I ++ GF + +G+ T VV + ++++ Sbjct: 194 TTRQFLTATDLQMALVKSAFFGFFIALMGCYHGFRAQGGAAGVGRATTDAVVSAFILILL 253 Query: 360 IDSLFAIF 367 + + + Sbjct: 254 SNMIITLM 261 >gi|251771480|gb|EES52057.1| putative integral membrane protein [Leptospirillum ferrodiazotrophum] Length = 253 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 127/250 (50%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F I G + ++ + Q+ +G VV++ +F TG Sbjct: 4 DFSGRLVRVPEIAGSLFMMGLSGLRGIFRPSFLGRNFFEQLLRIGADSTLVVVVTAFFTG 63 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +F AE ++++ RE+G ++T++M+ GRSGSA+ AE+GSM+++E Sbjct: 64 MVLALQAWIGFRKFNAEGLVGAVVTLSMTRELGPVITSLMVTGRSGSAMAAELGSMRVSE 123 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ +D V L++PR++A +++LPLLT LA+ I G +V K + ++F Sbjct: 124 QIDALETLAVDPVDYLVTPRLYASLVALPLLTALADLVGIGGGYVVAVKLLGLSPHLYFQ 183 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L + +G++K+ F + + A + GF + +G+ VT VV +++ Sbjct: 184 EISHYVDLHDFISGIVKSVFFGGLLALWACRTGFVASGGAAGVGRAVTFAVVSGSMSILV 243 Query: 360 IDSLFAIFYF 369 +D + F Sbjct: 244 VDYFLTAWLF 253 >gi|313894582|ref|ZP_07828145.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] gi|313440772|gb|EFR59201.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str. F0412] Length = 256 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N IG+ ++ ++ S ++ I + +QM ++GV Sbjct: 3 LLNWLESIGRTVINGLSQMGSATLLVWHTIKQLKMINLWH---------VFQQMAHLGVD 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++ L GAV+ Q L +GA+ LM++ RE+G +L V++AGR G+ Sbjct: 54 SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+MK+ E+IDA+R M +D V L+ PR+ A ++ +P+L I G V Sbjct: 114 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMVMVPILAFYGVVIGIAGGYFVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + +T+++ GLIK+ I +V +G + + ++G Sbjct: 174 TAIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T+ VV SI +V +++ + + Sbjct: 234 TSSVVTSIILVFVLNYFLSTLLY 256 >gi|157963422|ref|YP_001503456.1| hypothetical protein Spea_3608 [Shewanella pealeana ATCC 700345] gi|157848422|gb|ABV88921.1| protein of unknown function DUF140 [Shewanella pealeana ATCC 700345] Length = 261 Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 127/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + + LG +F+ L++Q+Y +GV + ++I+ Sbjct: 6 HIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVIIIVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AE+G MK Sbjct: 66 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +ISLPLL ++ I G +V ++ I Sbjct: 126 STEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKGIDSGS 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I +IK+ A + +A+ G+ V + + + T VVQS Sbjct: 186 FWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTAVMFG 260 >gi|315125511|ref|YP_004067514.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913] gi|315014024|gb|ADT67362.1| ABC transporter membrane protein [Pseudoalteromonas sp. SM9913] Length = 259 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 78/255 (30%), Positives = 133/255 (52%), Gaps = 2/255 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + K + + + LG FK L+RQ+Y VG + ++++ Sbjct: 5 LQKIGHKTLGRFAALGRSTQMLASALWHVPNFKKGTPLLVRQLYMVGSQSLLIIVVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L ++ + AIIGA +V + + F Sbjct: 125 TEQLSSLEMMAIDPLRRIIAPRFWAGLISMPMLALIFSAVAIIGAHLVGVDWLGVDTGSF 184 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S + +I GLIK+ A + +A+ +G+ S + K T VV S Sbjct: 185 WSIMQSQVSFEKDILNGLIKSIVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLA 244 Query: 357 VIIIDSLF-AIFYFA 370 V+ D + A+ + + Sbjct: 245 VLGFDFILTAVMFTS 259 >gi|167625602|ref|YP_001675896.1| hypothetical protein Shal_3697 [Shewanella halifaxensis HAW-EB4] gi|167355624|gb|ABZ78237.1| protein of unknown function DUF140 [Shewanella halifaxensis HAW-EB4] Length = 261 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + S LG A +F+ L+RQ+Y VGV + ++++ Sbjct: 7 IARLGRASIEFVIGLGKAGLMLWGAIAHRPRFRKGAPLLLRQLYVVGVQSMVIILVSGLF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AE+G MK Sbjct: 67 IGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMKS 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +ISLPLL ++ I G IV ++ I F Sbjct: 127 TEQLASLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHIVGVEWKGIDSGSF 186 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I +IK+ A + +A+ G+ V + + + T VVQS Sbjct: 187 WSILQASVEWREDIVNCMIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLA 246 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 247 VLALDFLLTAIMFG 260 >gi|162146610|ref|YP_001601069.1| hypothetical protein GDI_0788 [Gluconacetobacter diazotrophicus PAl 5] gi|161785185|emb|CAP54731.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 373 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 77/346 (22%), Positives = 147/346 (42%), Gaps = 13/346 (3%) Query: 31 INKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISF 87 + ++ A+ DT + ++ H ++ + +L L+ Sbjct: 38 LRQAAPGRPLTFRSDALGRWDTGLIAFLWDLKQRATQAHLDLRTDTLPDSARKLLDLLPE 97 Query: 88 THRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY 147 + + +G ++ + + + + E Sbjct: 98 APPPPPTPRPRTFAP--------VTALGAFTIESLTEIGTVTELGVETARGGLEAVTGRG 149 Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQ 207 + + L+ + G S + +V +++F+ GA++A GA QL +F A+I+ L+ I Sbjct: 150 RMRSI--DLMSNIRDAGPSALLIVSVVNFLVGAILAFVGAVQLRKFAADIYVASLVGIAM 207 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +RE+ ++TA+++AGR+G A A I +M+ NEEIDA+ G+ LI P I L+ ++ Sbjct: 208 VREMSAVMTAIIMAGRTGGAYAARIATMQGNEEIDALTVFGIPVSSYLILPSILGLVATM 267 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 P L + ++G V + A +F + + L G IK+ F A IG+ Sbjct: 268 PFLYLYGCLIGMLGGFTVAISMLAVTGAGYFHQTINAVGLNQFEFGFIKSIFFAILIGLT 327 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + + G G + +G T VV I VI +D++FA+ +GI Sbjct: 328 SCRIGLRSGRSAADVGVAATRAVVVGIVGVITLDAIFAVIATTLGI 373 >gi|16329621|ref|NP_440349.1| hypothetical protein slr1045 [Synechocystis sp. PCC 6803] gi|81670420|sp|P73009|Y1045_SYNY3 RecName: Full=Probable ABC transporter permease protein slr1045 gi|1652104|dbj|BAA17029.1| slr1045 [Synechocystis sp. PCC 6803] Length = 263 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 1/242 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L TG+ + + + + QM VG + + ++ + G V Q A + Sbjct: 17 LVAAFFLTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVGMVFTIQVAREFI 76 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +GA ++S+ RE+ +LTAV+IAGR GSA AEIG+M++ E++DA+ + D Sbjct: 77 YYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQLDALYMLRTDP 136 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LT L+ F + G ++ Y I +F + + L ++F Sbjct: 137 IDYLVVPRVIACGLMLPILTGLSLFVGMAGGLVISSSLYAINPTIFLNSVQNFTQLWDVF 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370 L K+ I I+ G + +G+ TT VV S+ + I + + + + Sbjct: 197 ACLFKSLVFGVIIAIIGCSWGLTTTGGAKGVGESTTTAVVTSLLAIFISNFFLSWLMFQG 256 Query: 371 IG 372 G Sbjct: 257 TG 258 >gi|269104097|ref|ZP_06156794.1| uncharacterized ABC transporter permease component YrbE [Photobacterium damselae subsp. damselae CIP 102761] gi|268163995|gb|EEZ42491.1| uncharacterized ABC transporter permease component YrbE [Photobacterium damselae subsp. damselae CIP 102761] Length = 260 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG++ + G + + L++Q+Y VGV Sbjct: 2 ITDFIAAIGRRTLNLCKTV-------GRASLMLYGALICKPQPRKMFPLLLKQLYSVGVL 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GS Sbjct: 55 SIAIILVSGLFIGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G +V Sbjct: 115 ALTAEIGLMKATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFTAVGIWGGQLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + I + ++S S+ + +I GL+KA A + +A+ G+ S + + Sbjct: 175 VDWKGIDYGSYWSVMQSSVDVWYDIGNGLLKAVVFAITVTWIAVFNGYDAVPTSEGISRA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D + F Sbjct: 235 TTRTVVNSSLAVLGLDFVLTALMFG 259 >gi|167031981|ref|YP_001667212.1| hypothetical protein PputGB1_0966 [Pseudomonas putida GB-1] gi|166858469|gb|ABY96876.1| protein of unknown function DUF140 [Pseudomonas putida GB-1] Length = 265 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|85713028|ref|ZP_01044065.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina baltica OS145] gi|85693131|gb|EAQ31092.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina baltica OS145] Length = 258 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +G ++ + ++QMY VGV + ++++ Sbjct: 3 RLARLGATVTDAIAGIGRALAMLLGAIIGKPTPRKSWPLFVQQMYVVGVLSLIIIVVSGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +S+PLL ++ + I G +V + + Sbjct: 123 ATEQLSSLEMMAVDPLRRVVAPRFWAGFVSMPLLALIFSAVGIYGGYLVGSGWLGVDEGA 182 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S ++ G+IK+ A + +A+ +G+ S + K T+ VV + Sbjct: 183 FWSVMQSAVDWRDDLMNGIIKSLVFAFVVTWIALYKGYRCEPTSAGISKATTSTVVTASL 242 Query: 356 IVIIIDSLFAIFYFA 370 ++ +D + F Sbjct: 243 AILGLDFILTALMFG 257 >gi|326795053|ref|YP_004312873.1| hypothetical protein Marme_1781 [Marinomonas mediterranea MMB-1] gi|326545817|gb|ADZ91037.1| protein of unknown function DUF140 [Marinomonas mediterranea MMB-1] Length = 260 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 133/252 (52%), Gaps = 2/252 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 KK+ Q +G + A ++ L+ Q+Y VGV + +VI+ Sbjct: 2 KKVRNVGQSLFDQLESIGRAGIFLFQTLARLPVRWDESCRLLVNQVYSVGVLSLVIVIVS 61 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 G V+A QG L++FG+E L+++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 62 GCFIGMVLALQGYTILAKFGSEQAVGQLLALSLLRELGPVVTALLFAGRAGSALTAEIGL 121 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK E++ + MG+D +R +I+PR A +I +PLL ++ + + I+G +V + I Sbjct: 122 MKATEQLSSYEMMGVDPLRRVIAPRFIAGMICMPLLCLIFSATGILGGMLVSVHWLGIYD 181 Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F+S + ++F G+IK+ F ACAI +A+ +GF S +GK T VV Sbjct: 182 GSFWSLMQQSVYFDIDVFNGIIKSIFFACAITWIAVYQGFECDPTSEGIGKATTRTVVLG 241 Query: 354 ISIVIIIDSLFA 365 V+ +D + Sbjct: 242 SLAVLFLDFILT 253 >gi|304437504|ref|ZP_07397462.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369554|gb|EFM23221.1| ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 255 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G V+ GE + + + S++ QM ++G + +V L Sbjct: 5 LESVGAFVLTHLANIGRVVLLYGETMRQVTR-RLRVRSIVYQMAHLGADSLLIVGLTLLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ Q A + ++GA+ +++I RE+G +L V+ AGR G+AI AE+ +MK+ Sbjct: 64 TGIVLTLQIAHEFIRYGAQSTIGAVIAIGIGRELGPVLVGVVCAGRVGAAITAEVSTMKV 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R M + V LI PR+ A ++ +P+LT+ + ++G Y I F Sbjct: 124 TEQIDALRVMAVSPVNYLIVPRMLACMVVVPILTVFGDVIGVLGGYFTAVYYSGISGYTF 183 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 A L ++ GLIKA F I ++ G + +G VV SI ++ Sbjct: 184 LHSITQYALLYDMTGGLIKAIFFGNVIAVLGCYYGLHAPSGAEGVGTATMQTVVTSIIVI 243 Query: 358 IIIDSLFAIFYF 369 I++++ F F Sbjct: 244 FILNAVLTFFLF 255 >gi|330501880|ref|YP_004378749.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01] gi|328916166|gb|AEB56997.1| hypothetical protein MDS_0966 [Pseudomonas mendocina NK-01] Length = 265 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F LG + + L LI+Q++ VGV + ++++ Sbjct: 8 ERLRLFGRAGIDVVATLGRSVLFLLGALFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA IS+PLL ++ + I G ++V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|294139194|ref|YP_003555172.1| hypothetical protein SVI_0423 [Shewanella violacea DSS12] gi|293325663|dbj|BAJ00394.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 258 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + LG + KG ++Q+Y VGV + ++++ Sbjct: 4 SLANLGRGGIDLVTGLGRAGLMLWGAVVRKPRLKG-FSLFVKQLYVVGVQSMVLILISGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA ++SLPLLT++ I G +V ++ I Sbjct: 123 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAVGIYGGHLVGVEWKGIDSGS 182 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ + +A+ G+ V + + K T VVQS Sbjct: 183 FWSILQASVEWRQDIVNCLIKSFLFGIVVTWIALYRGYQVTPNPEGISKATTQTVVQSSL 242 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 243 AVLALDFLLTALMFG 257 >gi|225850834|ref|YP_002731068.1| ABC-type transport system involved in resistance to organic solvents, permease component [Persephonella marina EX-H1] gi|225645536|gb|ACO03722.1| ABC-type transport system involved in resistance to organic solvents, permease component [Persephonella marina EX-H1] Length = 248 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 117/243 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G E + +++ M +GV+ P++ + F TG V+ Sbjct: 4 IKNFVEHTGAAFLLFLETLKVIILSPPKVKHILKYMEEIGVTAAPLIAITGFFTGGVLVV 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + +F AE L+S+ RE+ +L A+++ RSGSA+ A IG+MKI E+IDA+ Sbjct: 64 ETYPTFHKFNAEFLIGALVSLSLSRELSPVLVALLVTARSGSAMAANIGTMKITEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + M ++ VR LI+PR+ A ++ +P L IL+ ++G V Y I +F + Sbjct: 124 KVMAVNPVRYLIAPRLIASLLMVPALVILSYTFGLLGGYFVGVNLYGINPYLFVEKMKDF 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L +I GL K+ A I IV+ G+ + +G+ TT VV S +V+I+D Sbjct: 184 TELYDILGGLYKSMGFATIITIVSCYFGYVTKGGAEGVGRSTTTAVVVSSVLVLIVDYFL 243 Query: 365 AIF 367 Sbjct: 244 TAI 246 >gi|23016441|ref|ZP_00056197.1| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Magnetospirillum magnetotacticum MS-1] Length = 271 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 2/264 (0%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 F +G++ I + A +LG + G + L ++ Q + Sbjct: 7 PQGFIGFLDRLGRRAAAAIAEFGFGATLLGESLYWLGM--GKKRRQPVRLAPVVAQAMEI 64 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G+ +P+V ++S G ++A QG + L FGAE +++ +RE G L+T +++AGR Sbjct: 65 GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA+ A +G+M+IN+EIDA+ MG+ VR L+ P + A+++ LP LT+ ++ + A Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMVMLPALTLWSDLVGLFAAG 184 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + I + L +++ GL K+ + I +V + G +V + +G Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDVWHGLGKSAIFSVLITLVGVVNGASVTGGAEGVG 244 Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367 + T VV +IS +++ D +F Sbjct: 245 RLTTRSVVHAISAIVVTDMIFVFM 268 >gi|113476613|ref|YP_722674.1| hypothetical protein Tery_3053 [Trichodesmium erythraeum IMS101] gi|110167661|gb|ABG52201.1| protein of unknown function DUF140 [Trichodesmium erythraeum IMS101] Length = 249 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + K + + I QM VG + +V+L + G V Q A +L F Sbjct: 3 AATYLAGQVFVHLFHGKIYRRNTIEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAF 62 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+G +LTAV++AGR GSA AEIG+MK+ E+IDA+ + D V Sbjct: 63 GTANMVGGMLALTLSRELGPVLTAVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVD 122 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + +P+LT+L +AI G I+ YDIP +++ S TL ++ +G Sbjct: 123 YLVIPRVIACGVMMPILTLLCLVAAIFGGLIIAVNLYDIPQSMYIDSVRSFLTLWDLCSG 182 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 L K+ I ++ G + +GK TT VV S+ + I + + + +G Sbjct: 183 LTKSVVFGVLIAVIGTSWGLTTTGGAKGVGKSTTTAVVTSLISIFIFNFFLSWAMFQGMG 242 >gi|325273317|ref|ZP_08139589.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51] gi|324101550|gb|EGB99124.1| hypothetical protein G1E_09861 [Pseudomonas sp. TJI-51] Length = 265 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G LIRQ+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVVAVLGRSCLFLFHALVGRGGIGGGFQLLIRQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GLIK+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVATWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|242277489|ref|YP_002989618.1| hypothetical protein Desal_0007 [Desulfovibrio salexigens DSM 2638] gi|242120383|gb|ACS78079.1| protein of unknown function DUF140 [Desulfovibrio salexigens DSM 2638] Length = 249 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 128/242 (52%), Gaps = 1/242 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + + + K + LIR + VG +P+V +IS TG ++A Q Sbjct: 4 LHVLAWMVSRLLGCLRLTPGNKK-SFYRKRLIRDLASVGADSIPIVSVISACTGIILALQ 62 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A QL + GA + +L+ + +RE+G LLTA+++ GRSG+A AEI +M+I+EEIDA+ Sbjct: 63 SAQQLEKVGAISYVANLVGVTIIRELGPLLTAIIVTGRSGAAFTAEIATMQISEEIDALE 122 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG++ VR L+ P++ A++I +P LT+ A+F I I +F+ Sbjct: 123 VMGIEPVRFLVVPKMIAMLIMVPCLTVWADFVGIFSGGAFSAIALGINEVTYFNNSVEFL 182 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L ++ GL+KA A AI ++ +GF + +G+K T VV SI ++I++D F Sbjct: 183 KLHDVLAGLVKAGGFAVAITLIGCWQGFLAREGAADVGRKTTNSVVISIFMIILLDLFFT 242 Query: 366 IF 367 Sbjct: 243 AL 244 >gi|146305912|ref|YP_001186377.1| hypothetical protein Pmen_0877 [Pseudomonas mendocina ymp] gi|145574113|gb|ABP83645.1| protein of unknown function DUF140 [Pseudomonas mendocina ymp] Length = 265 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F LG + + L LI+Q++ VGV + ++++ Sbjct: 8 ERLRLFGRAGIDVVATLGRSVLFLVGAVFGRSRAGKPLQLLIKQLFAVGVMSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGYNILVSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA IS+PLL ++ + I G ++V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISMPLLAMIFSVVGIWGGAMVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SFWSNMQNSVSFYDDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|71282011|ref|YP_271183.1| hypothetical protein CPS_4535 [Colwellia psychrerythraea 34H] gi|71147751|gb|AAZ28224.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 258 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + LG + + L++Q+Y VGV + ++++ G Sbjct: 7 LGKQTLNMISGLGRAVILLISALMHVPNIRKGTPLLMQQLYSVGVLSLLIIVVSGTFIGM 66 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG L +GAE ++++ LRE+G ++ A++ AGR+GSA+ AEIG MK E+ Sbjct: 67 VLALQGYTILVGYGAEASLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKATEQ 126 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D +R +I+PR WA ISLPLL + + I+GA +V + + F+S Sbjct: 127 LSSLEMMAIDPLRRVIAPRFWAGFISLPLLAAIFSMVGILGAHVVGVDWLGVDGGTFWSV 186 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +I G+IK+ A + +A+ +G+ S + + T+ VVQS +V+ Sbjct: 187 MQDQVDFQKDILNGIIKSIVFAFVVMWIAVYKGYDCEPTSEGISRATTSTVVQSSLLVLF 246 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 247 LDFILTALMFV 257 >gi|224588219|gb|ACN58843.1| ABC transporter permease protein [uncultured bacterium BLR12] Length = 264 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 115/238 (48%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S + + ++ ++ ++RQ Y +G +P++ L F+ G V +Q Sbjct: 19 SFFINVAQTLRFILDYFVQLFRPPYEFSEIVRQCYKIGCDSLPLISLTGFIIGVVFTKQS 78 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 LS+FGA + L+ I + + L+TA++ AG+ GS+I AE+G+MK+ E+I+A+ Sbjct: 79 RPSLSEFGATSWLPSLIGIAVFKALAPLVTALICAGKVGSSIGAELGAMKVTEQIEAMDV 138 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 + L+ R+ A + LP+L + + +++G+ + I I A F + Sbjct: 139 SASKPYKYLVFTRVTACLFMLPILMLFTSLVSLMGSYLDISSNEHISLATFITNAFDKIN 198 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ LIKA IG+VA +GF + +GK VV S+ ++ I + + Sbjct: 199 FLDLKASLIKALVFGFTIGMVACYKGFNTIRGTEGVGKAANAAVVTSMYLIFIEELII 256 >gi|259416059|ref|ZP_05739979.1| membrane protein [Silicibacter sp. TrichCH4B] gi|259347498|gb|EEW59275.1| membrane protein [Silicibacter sp. TrichCH4B] Length = 260 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 115/250 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S + LG + + + + + VG +PVV L + TG Sbjct: 11 GRTSLGRLAALGRITRFAASTFSHMLRPPFYPREFANALLQVGWLSLPVVALTAIFTGGA 70 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+I Sbjct: 71 LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + ++ L++PR+ A +I++P+L + + I+G +V + D A + Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALITVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +I + L+K ++ G G + +G+ V + +++ + Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250 Query: 362 SLFAIFYFAI 371 + +F++ Sbjct: 251 FVLTGVFFSL 260 >gi|226943414|ref|YP_002798487.1| organic solvent tolerance ABC efflux transporter, permease [Azotobacter vinelandii DJ] gi|226718341|gb|ACO77512.1| organic solvent tolerance ABC efflux transporter, permease component [Azotobacter vinelandii DJ] Length = 265 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + LG G L++Q++ +GV +P++++ G Sbjct: 13 LGRAAIDVIEALGRSALFLMHATFGRSGAGGGFQLLVKQIHSIGVLSLPIIVVSGLFIGM 72 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG L +G+E L+++ LRE+G ++T ++ AGR+GSA+ AEIG+MK E+ Sbjct: 73 VLALQGYNILVSYGSEQAVGQLVALTLLRELGPVVTGLLFAGRAGSALTAEIGNMKSTEQ 132 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ +G+D ++ +I+PR+WA +S+PLL + N I GA++V + + F++ Sbjct: 133 LSSLEMIGVDPLKYIIAPRLWAGFLSMPLLAAIFNVVGIWGAAMVAVDWLGVYDGSFWAS 192 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 S+ L ++ G IK+ A + +A+ +G+ S +G+ T VV + V+ Sbjct: 193 MQSSVDLYDDVVNGAIKSIAFAFVVTWIAVFQGYDCEPTSEGIGRATTRTVVYASLAVLG 252 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 253 LDFILTALMFG 263 >gi|323140905|ref|ZP_08075818.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp. YIT 12067] gi|322414643|gb|EFY05449.1| hypothetical protein HMPREF9443_00583 [Phascolarctobacterium sp. YIT 12067] Length = 283 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 115/217 (52%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++RQM +G +P+V++ TG V + Q A + + GA +++I RE+ Sbjct: 67 KEVVRQMALLGADSLPIVMMTILCTGMVFSVQTAKEFVRLGASSSVGGIVAIAMARELVP 126 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +LT V++AGR G+AI AE+G+MK+ E+IDA+R M + V L+ PR AL++ +P+L + Sbjct: 127 VLTGVVVAGRIGAAIAAELGTMKVTEQIDALRVMAANPVSYLVVPRFIALVLMMPVLVVF 186 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 ANF IG +V Y I + + + A ++F G++K+ I IV +G Sbjct: 187 ANFIGNIGGWVVAHYYAGIGSFTYENSIRTLAEFYDVFGGMVKSCVFGAIIAIVGCYKGL 246 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV SI +V I + +I + Sbjct: 247 NAPNGAEGVGLATTASVVLSIILVFITNYFLSIVLYV 283 >gi|254512036|ref|ZP_05124103.1| membrane protein [Rhodobacteraceae bacterium KLH11] gi|221535747|gb|EEE38735.1| membrane protein [Rhodobacteraceae bacterium KLH11] Length = 260 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 111/252 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + G V + + ++ + + +G +PVV L + TG Sbjct: 9 ELGRAILTMLAAFGRVALFALDAVSHIFRPPFYPREFGIALLNIGWLSLPVVGLTAIFTG 68 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E Sbjct: 69 GALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTE 128 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ ++ L +PR+ A +I++P+L + + I G V + A + Sbjct: 129 QIDALVTLSTHPMKYLTAPRVLAALITVPVLVGVGDIIGIAGGYTVATQNLGFNPAAYLK 188 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + +I + L+K I+ G G + +G+ V + +++ Sbjct: 189 NTVDFLEMRDIVSSLVKGAAFGVIAAIMGCYYGMNSGRGAQGVGRATKGSVEAAAVLILA 248 Query: 360 IDSLFAIFYFAI 371 + + +F++ Sbjct: 249 ANFVLTGVFFSL 260 >gi|227825164|ref|ZP_03989996.1| membrane protein [Acidaminococcus sp. D21] gi|226905663|gb|EEH91581.1| membrane protein [Acidaminococcus sp. D21] Length = 260 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 9/267 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 K + ++G + V + ++ + + ++RQM +G Sbjct: 2 GLKTICAYLGHRAVYAFRATGRIMNLFFATCAALSKATP---------REVLRQMAKLGA 52 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 +P+V + S TG V++ Q A + +FGA +++I RE+ +L V++AGR G Sbjct: 53 DSLPIVSMTSMCTGMVLSVQTAKEFVRFGAADSVGGIVAIAMARELAPILAGVVVAGRIG 112 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 +AI AEIG+MK+ E+IDA+R M + L++PR A+++ +P+L I AN IG V Sbjct: 113 AAIAAEIGTMKVTEQIDALRVMATSPTQYLVAPRFLAIVLMMPILVIYANLVGDIGGGFV 172 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 Y I +F ++ GLIK I ++ +G + +GK Sbjct: 173 AMNYAGIGSHMFIESIRGFVESWDLVGGLIKGSVFGAIIAVIGCHKGLNAQQGAEGVGKA 232 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV SI ++ I + ++ + G Sbjct: 233 TTASVVLSIILIFIFNYFLSVMLYVHG 259 >gi|18149137|dbj|BAB83590.1| toluene resistance protein Trg1 [Pseudomonas putida] gi|269200089|gb|ACZ28672.1| Ttg2B [Pseudomonas putida] Length = 265 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|300871878|ref|YP_003786751.1| ABC transporter permease-like protein [Brachyspira pilosicoli 95/1000] gi|300689579|gb|ADK32250.1| ABC-type transport system permease protein-like protein [Brachyspira pilosicoli 95/1000] Length = 268 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 2/251 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG S + +++ L Q+ +GV V + TG V++ Sbjct: 18 IIILLDTLGEFASLLIQIFKYTFRPSFSFKLLTDQIVRMGVESFIVAAVTVLCTGMVMSL 77 Query: 185 QGAFQLSQF--GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A L G F ++ ++E+ +L A++ AGR GS++ AEIG+M+++E++D Sbjct: 78 QIAVVLDSVLKGISQFVGSMVGKAMVKELSPMLLALIFAGRVGSSVTAEIGTMQVSEQLD 137 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++T+ + + + PR WA +ISLP+LT+ A+ ++G ++V + A++F R Sbjct: 138 ALKTLYTNPIEYVAVPRFWAAVISLPMLTVSADIIGVLGGAVVTVFVLNNDPAIYFDRAI 197 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + +L + LIK+ + +++ GF + +GK T VV S +++I D Sbjct: 198 AVISLGDFIGSLIKSTIFGAEVILISCFYGFRTNGGAEGVGKATTISVVYSFMLILITDY 257 Query: 363 LFAIFYFAIGI 373 L G+ Sbjct: 258 LLVSILGMFGM 268 >gi|148546241|ref|YP_001266343.1| hypothetical protein Pput_0998 [Pseudomonas putida F1] gi|148510299|gb|ABQ77159.1| protein of unknown function DUF140 [Pseudomonas putida F1] Length = 265 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|284929638|ref|YP_003422160.1| hypothetical protein UCYN_11070 [cyanobacterium UCYN-A] gi|284810082|gb|ADB95779.1| conserved hypothetical integral membrane protein [cyanobacterium UCYN-A] Length = 263 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 114/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ K K + + QM VG + + ++ + G V Q A + Sbjct: 18 LVAAILLGGQVFFHILKTKIHKRNTLEQMSVVGPESLTISMITAAFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E++DA+ + D Sbjct: 78 SFGAVSTVGGVLALALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQVDALYMLKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+L IL+ + + G ++ YDI VF + + ++ Sbjct: 138 ISYLVVPRVLACCLMLPILNILSLITGMAGGLLIANGLYDISVYVFLTSVRNFLEFWDLI 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 T IKA I ++ G + +G+ TT VV S+ V II+ + F Sbjct: 198 TSTIKAITFGGLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTSLLAVFIINFFLSWIMFQ 256 >gi|153004838|ref|YP_001379163.1| hypothetical protein Anae109_1976 [Anaeromyxobacter sp. Fw109-5] gi|152028411|gb|ABS26179.1| protein of unknown function DUF140 [Anaeromyxobacter sp. Fw109-5] Length = 250 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 116/243 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG ++ GE + + L ++ QM ++GV +V + G V A Sbjct: 4 LKAGLEDLGRMLMFAGEMVGWAVRPPFRLELVLAQMAFIGVGSAFIVGVTGTFAGMVFAL 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q F + QF AE + ++ RE+ + TA+M+ GRSGSAI E+G+M++ E+IDA+ Sbjct: 64 QMNFAMKQFAAEGYVGGSVAFSLARELSPVFTALMVTGRSGSAIATELGTMRVTEQIDAM 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +M ++ ++ L+ PR+ A +I P LT+L N G ++ IP + + Sbjct: 124 ESMAVNPIQYLVVPRVIASLIMFPFLTMLFNSLGYAGGFVMGVYVAGIPIGPYLAHTQEF 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +I GL KA + ++ G+A + +G+ T VV S +++ D + Sbjct: 184 MDVGDILHGLFKAVVFGLIVSVITTWRGYAAFGGAKGVGEGTTRGVVASSITILLADYVI 243 Query: 365 AIF 367 Sbjct: 244 TFI 246 >gi|298490672|ref|YP_003720849.1| hypothetical protein Aazo_1524 ['Nostoc azollae' 0708] gi|298232590|gb|ADI63726.1| protein of unknown function DUF140 ['Nostoc azollae' 0708] Length = 261 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + K + ++ G + +P V+L+S G + Q A +L +FG Sbjct: 22 TVLLFGQISLHILQGKTYYGKVLEHTVTAGPASLPPVLLVSGFAGMIFTIQTARELVRFG 81 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A ++ RE+ +LTA +IAG+ GSA AEIG+M++ E+IDA+ + D + Sbjct: 82 AVENVGGAFALAFCRELAPILTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDY 141 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A + +PL+ ILA I G + +Y + F T +++F L Sbjct: 142 LVLPRVIACCLMMPLMMILAVIMGITGGAFAASYFYQVQPETFLESVRDFLTPSDVFIIL 201 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K + + G + +G+ TT VV + + I+D + A+ F Sbjct: 202 LKGLIFGLIVAVNGCSWGLTTKGGAKEVGESATTAVVTTWVAIFIMDFILALILFE 257 >gi|284036726|ref|YP_003386656.1| hypothetical protein Slin_1812 [Spirosoma linguale DSM 74] gi|283816019|gb|ADB37857.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74] Length = 271 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 115/237 (48%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L V S G F + ++RQ Y VG + ++ F+TG V Sbjct: 20 RRLDRFLLGLADVSSFIGRFFREALLPPYEFKEIVRQCYEVGFRSLLLISTTGFITGIVF 79 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q LS+FGA + L++I +R +G L+TA++ AG+ GS+I AE+GSM + E+ID Sbjct: 80 TNQSRPSLSEFGATSWLPSLIAIAIVRALGPLVTALIAAGKVGSSIGAELGSMNVTEQID 139 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ G D + L+ R+ A ++PLLT+ F +IGA I + + F F Sbjct: 140 AMEVSGTDPFKFLVVTRVLATSFTIPLLTMYTIFVGLIGAYINVNQNEQTSFTSFMQEVF 199 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 T +IF ++K+ IG+V +G+ + +GK + VV S+ +V I Sbjct: 200 GAITYLDIFASVLKSIVFGFTIGMVGCYKGYHSSKGTEGVGKAANSAVVTSMFLVFI 256 >gi|26987695|ref|NP_743120.1| hypothetical protein PP_0959 [Pseudomonas putida KT2440] gi|24982381|gb|AAN66584.1|AE016286_8 toluene tolerance ABC efflux transporter, permease [Pseudomonas putida KT2440] Length = 266 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 9 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 68 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 69 VFIGMVLALQGYSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 128 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 129 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 188 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 189 SFWANMQNSVSFTDDVLNGLVKSVVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 248 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 LAVLGLDFILTALMFG 264 >gi|281356107|ref|ZP_06242600.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] gi|281317476|gb|EFB01497.1| protein of unknown function DUF140 [Victivallis vadensis ATCC BAA-548] Length = 263 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 3/244 (1%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G V S + + L + + G +P+V+LI F+ G V+A G Sbjct: 22 VVFIGRVASAL-PLLRQKRQLR--LKETLYYLDLCGAQSLPLVLLICFLMGGVLAINGQI 78 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QLS+FG+EIF +D++ L+E G L+ A++ G++GSA +EIG+MK++EEI A+ T+G Sbjct: 79 QLSKFGSEIFIVDMVGFSVLKEFGPLMVALIATGQAGSAFASEIGTMKVDEEISALETLG 138 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + L+ P++ A++I+LPLLT+ +F+ + G V +P A + R Sbjct: 139 IRPAAYLVLPKLIAMLIALPLLTVFGDFAGLTGGLAVGITVAGLPLAAYVERTLDILDST 198 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 G++K+ A I + GF + +G+ T VV SI V++ +L + Y Sbjct: 199 TFLLGVLKSFVFAVLITLAGCYCGFRSSGDAQGVGRAATAAVVISILFVVVATALLTVLY 258 Query: 369 FAIG 372 IG Sbjct: 259 SFIG 262 >gi|94986675|ref|YP_594608.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94730924|emb|CAJ54287.1| ABC-type transport system involved in resistance to organic solvents, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 266 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 5/255 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + ++ + S LG + E + IRQ+Y +G + V+ LI Sbjct: 7 QLVILLGQWTISICITLGEIFLFLLEGFRQIFITPKLCSKAIRQIYVIGTKSLFVISLIG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ QG + L +FG+ F +S+ +RE+G +LTA+MI R+GS++ AEIG M Sbjct: 67 LFTGMVLGLQGYYVLIKFGSVGFLGSAVSLTLIRELGPVLTAIMIIARAGSSMTAEIGVM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I ++IDA+ M + + L+SPRI A +IS PLLT + + IIG + + Sbjct: 127 RITDQIDALEVMDIPGIGYLVSPRIVASLISFPLLTAVFDVIGIIGGYLTGVCLLGVNEG 186 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCV 350 +FS S+ TL++I G IKA A + ++ +G+ G ++ T+ V Sbjct: 187 AYFSSIESSTTLSDINEGSIKALTFAILVILICCYKGYNAHRRRDGRGPEAVANATTSAV 246 Query: 351 VQSISIVIIIDSLFA 365 V S +V+I D + Sbjct: 247 VVSCVLVLIADYVVT 261 >gi|17231507|ref|NP_488055.1| hypothetical protein alr4015 [Nostoc sp. PCC 7120] gi|17133150|dbj|BAB75714.1| alr4015 [Nostoc sp. PCC 7120] Length = 263 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 7/258 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + A LG G+ + K + QM VG + + +L + Sbjct: 5 KSSIGTWSQRLLAAIFLG------GQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTA 58 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAV Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M Sbjct: 59 VFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTM 118 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ + ++G I+ Y I Sbjct: 119 RVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTGMLGGLIIATNMYGISDT 178 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 VF + + +I + +IKA I I+ G + +G+ TT VV ++ Sbjct: 179 VFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALL 238 Query: 356 IVIIIDSLFA-IFYFAIG 372 I+ + + + + + G Sbjct: 239 IIFVSNFFLSWVMFQGTG 256 >gi|238899004|ref|YP_002924686.1| putative ABC transporter, permease protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466764|gb|ACQ68538.1| putative ABC transporter, permease protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 261 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 123/255 (48%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + LG + + L LI+Q+Y VGV + ++++ Sbjct: 5 ESVSSLGRKGIDACSTLGRAGCMLLNIVFGKPEPRKNLPILIKQLYRVGVQSILIIVISG 64 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 65 LFIGMVLGLQGYLTLTTYGAEGSLGMLVALSLFRELGPVVSALLFAGRAGSALTAEIGLM 124 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA +ISLPLL L I G+S+V + I Sbjct: 125 KATEQLSSLEMMAIDPLRRVIAPRFWAGVISLPLLAALFISVGIFGSSMVAIDWKGIDAG 184 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S H + +++ K+ A I +++ G+ S + T VV S Sbjct: 185 FFWSAMHDSVMPSDVINCFFKSVSFAVIITWISVFNGYDATPTSEGISLATTRTVVNSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L + F Sbjct: 245 AVLAVDFLLTVLMFG 259 >gi|4336799|gb|AAD17958.1| toluene tolerance protein Ttg2B [Pseudomonas putida] Length = 265 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + ++++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALIGRGGIGGGFQLLTKQLYSVGVLSLAIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GLIK+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLIKSLVFAFVTTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|58040555|ref|YP_192519.1| ABC transporter permease protein [Gluconobacter oxydans 621H] gi|58002969|gb|AAW61863.1| ABC transporter permease protein [Gluconobacter oxydans 621H] Length = 387 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 81/369 (21%), Positives = 151/369 (40%), Gaps = 15/369 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G W++ + K S + DT + H Sbjct: 31 VMVLSGTWQAR--AGNIPVFPKDGLKKAPGAHLSFQTSDLQVWDTGLVAFLWDLKRVAHD 88 Query: 68 KI---KLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 +Q + + QL L+ + + ++ + +G + + + Sbjct: 89 AGISLDMQTLPGPMRQLLELLPEVPDEPVHHKTARTP--------FLETVGNHAIASMTE 140 Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + L + + L+ G + +V +++F+ GA++A Sbjct: 141 VGVVSELGALTAKGAVLTLLGRSRMRMV--DLLANTADAGPYALLIVGIVNFLIGAILAF 198 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 GA +L +F A I+ L+ I +RE+ ++TA+++AGR+G A A I +M+ NEEIDA+ Sbjct: 199 VGAVELQKFAAGIYVASLVGIAMVREMAAVMTAIIMAGRTGGAYAARISTMQGNEEIDAL 258 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 G+ LI P + +LII++P L + ++G +V DI A +F + + Sbjct: 259 NVFGIPTSTYLILPAVLSLIITMPFLYLYGCLIGMLGGFVVAISMLDITAAGYFHQTVTA 318 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G K+ IG+ + + G G + +G T VV I VI ID++F Sbjct: 319 FGIGQFIFGFTKSLVFGAFIGLTSCRIGLKAGRSAADVGIAATRAVVVGIVGVIAIDAIF 378 Query: 365 AIFYFAIGI 373 A+ +GI Sbjct: 379 AVIADVLGI 387 >gi|256420257|ref|YP_003120910.1| hypothetical protein Cpin_1211 [Chitinophaga pinensis DSM 2588] gi|256035165|gb|ACU58709.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 247 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H G + + + F +RQ +G+ + +V++IS G V Q A Sbjct: 5 FFHHFGSYLLMLKGMFSRPENMRMFWKEFMRQCVDIGIGSLGIVLIISMFMGGVTTLQIA 64 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +QL S + ++ + E LT +++AG GS I +E+G+M+++E+IDA Sbjct: 65 YQLISPVIPKSTIAQIVRDTIILEFAPTLTCIVLAGVVGSKIASELGNMRVSEQIDAQEI 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A II +P L +A F I G + ++ Sbjct: 125 MGINTKGYLIMPKILAAIIMIPCLIAIAGFLGIWGGQKAGELGGILSAEQYWQGLRQDFR 184 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 NIF L KA A I V G+ V + +GK T+ VV + +++ +D L A Sbjct: 185 AYNIFFALFKAFVFAFIIASVPSYYGYNVQGGALEIGKASTSAVVVTCVLILFMDYLLAA 244 Query: 367 FYF 369 Sbjct: 245 LLL 247 >gi|145297399|ref|YP_001140240.1| ABC-type transporter, permease subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142850171|gb|ABO88492.1| ABC-type transporter, permease subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 259 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + K +G A + + L++Q+Y VGV V ++++ Sbjct: 6 VSKLGRVGVRVISSIGRATIMLFHALAGKPEPRKHFPLLLQQLYVVGVQSVAIILVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE L+S+ LRE+G ++T ++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTGLLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +++PR WA +IS+PLL + + I G +V + F Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDLLGVDEGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I G IK+ A + +A+ G+ S + + T VV S Sbjct: 186 WSAMQASVDWQDDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFILTAVMFG 259 >gi|313497328|gb|ADR58694.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 265 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ + +LG G L +Q+Y VGV + +V++ Sbjct: 8 ERVRLLGRSAIDVLAVLGRSCLFLFHALVGRGGIGGGFQLLTKQLYSVGVLSLAIVVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGYSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLALIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ + ++ GL+K+ A +A+ +G+ S + + T VV + Sbjct: 188 SFWANMQNSVSFTDDVLNGLVKSLVFAFVSTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|163749276|ref|ZP_02156525.1| hypothetical protein KT99_08438 [Shewanella benthica KT99] gi|161330995|gb|EDQ01921.1| hypothetical protein KT99_08438 [Shewanella benthica KT99] Length = 260 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 2/258 (0%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 + + + + LG A + KG L ++Q+Y VGV + ++++ Sbjct: 3 MAESLANLGRGGIALVTGLGKAGIMLWGAIAHKPRLKG-LPLFVKQLYVVGVQSMVLILI 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG Sbjct: 62 SGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E++ ++ M +D +R +I+PR WA ++SLPLLT++ I G IV ++ I Sbjct: 122 LMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLTLMFTAIGIYGGYIVGVEWKGID 181 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F+S ++ +I LIK+ + +A+ G+ V + + K T VVQ Sbjct: 182 GGSFWSILQASVEWREDIVNCLIKSFLFGIVVTWIALYRGYQVVPNPEGISKATTQTVVQ 241 Query: 353 SISIVIIIDSLFAIFYFA 370 S V+ +D L F Sbjct: 242 SSLAVLALDFLLTAIMFG 259 >gi|313682719|ref|YP_004060457.1| hypothetical protein Sulku_1596 [Sulfuricurvum kujiense DSM 16994] gi|313155579|gb|ADR34257.1| protein of unknown function DUF140 [Sulfuricurvum kujiense DSM 16994] Length = 264 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 110/246 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 GL I + ++ Q+ +G+ + V+ L + TG V A Q Sbjct: 18 EAIERFGLFILFQLQLFKLYPLTFKRYKIVLTQIEVIGLGCMGVITLTALFTGMVEAIQL 77 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 QFGAE F+ + RE+G + ++M+ RS SA+ AE+G+M+++E+IDAI Sbjct: 78 YNGFHQFGAENFTGYTIFYSISRELGPVFASLMLISRSISAMAAELGTMRVSEQIDAIDI 137 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ LI+PRI A +ISLPLL I +F A+ A + I + Sbjct: 138 LGVNSKEYLITPRIIATVISLPLLVIWFDFIAVGSAYFISIGVLGINPVAYQDTLMRLGE 197 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +I TG+IKA + + G+ + +G+ VV S + + + + Sbjct: 198 FEDIMTGVIKAAVFGFIVSSIGSYIGYHTSGGARGVGQSTIYAVVYSAVAIFVTNYFLSA 257 Query: 367 FYFAIG 372 + + Sbjct: 258 LFLYLD 263 >gi|91791861|ref|YP_561512.1| hypothetical protein Sden_0497 [Shewanella denitrificans OS217] gi|91713863|gb|ABE53789.1| protein of unknown function DUF140 [Shewanella denitrificans OS217] Length = 265 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + G + L++Q+Y +GV + ++I+ G Sbjct: 14 VGQSAIAFMRGFGKAGLMLWGALFHIPNVRKGGPLLLKQIYVLGVRSMIIIIVSGLFIGM 73 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 74 VMALQGYNVLVGFGTEESLGPMVALSLLREMGPVVTALLFAGRAGSALTAEIGLMKSTEQ 133 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D +R +I+PR WA +IS+PLL ++ + I G +V ++ I F+S Sbjct: 134 LSSLEMMAIDPLRQVIAPRFWAGVISMPLLAVMFSLVGIYGGHLVGVEWKGIDSGTFWSI 193 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ +I LIK+ A + +A+ G+ V + + + T+ VVQ+ V+ Sbjct: 194 LQASIEWRQDIVNCLIKSTVFAVVVTWIALYRGYEVNPNPEGISRATTSTVVQASLAVLG 253 Query: 360 IDSLFAIFYFA 370 +D L F Sbjct: 254 LDFLLTAIMFG 264 >gi|149190595|ref|ZP_01868864.1| putative ABC superfamily transport protein [Vibrio shilonii AK1] gi|148835593|gb|EDL52561.1| putative ABC superfamily transport protein [Vibrio shilonii AK1] Length = 262 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 125/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I K + S G S + K LI+Q++ VGV + ++++ Sbjct: 7 WIQKVGQRTLSLCQSWGRATFMLFGVLFSKPQPKKHFPLLIKQLHNVGVQSLAIIMVSGL 66 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 67 FIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 126 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D ++ +ISPR WA +IS+PLL ++ I G +V + I Sbjct: 127 ATEQLSSMEMMAVDPLKRVISPRFWAGVISMPLLAMIFMAIGIWGGQLVGVDWKGIDHGS 186 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 FWSAMQSSVELGRDIGNSVIKCLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHSSL 246 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 AVLGLDFVLTALMFG 261 >gi|307153262|ref|YP_003888646.1| hypothetical protein Cyan7822_3422 [Cyanothece sp. PCC 7822] gi|306983490|gb|ADN15371.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822] Length = 264 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 1/242 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ K+K + + QM VG + + ++ + G V Q + + Sbjct: 18 LSAAILLGGQVFFHLLKYKIHRRNTLDQMAIVGPESLTISLVTAAFVGMVFTIQVSREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA + ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 YFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALHMLKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LT+LA + I G + Y+I AVF + + ++ Sbjct: 138 IDYLVIPRVLACSLMLPILTVLALLTGIAGGIAIADSLYNISPAVFLNSARNFLQTWDLV 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370 + ++K+ I ++ G + +G+ TT VV ++ + + + + + + Sbjct: 198 SCILKSAVFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVTNFFLSWLMFQG 257 Query: 371 IG 372 G Sbjct: 258 TG 259 >gi|301167973|emb|CBW27559.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 292 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 121/256 (47%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + + LG + +F +K Q Y++G + ++ L Sbjct: 36 KFVEAIGSMTMENVQGLGSICRFIFKFFYWVFKPPYRFKLFAEQFYFIGNKSLFIITLAG 95 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+A Q F + +++I +E+ +L+ +++AGR+G+A+ A+IG+M Sbjct: 96 SFTGMVMAYQTYFGFKLINVDSLVGSVVAISLAKELAPVLSGLIVAGRAGAAMAAQIGTM 155 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E++DA+ MG+D + L PRI A +SLP+L+I+ F +G+ IV I Sbjct: 156 KVTEQVDALEVMGIDSYQYLAVPRILAATLSLPMLSIVFLFVGNVGSYIVGTVALLIDET 215 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ S+ + +I G+IKA I ++ GF V + +GK VV + Sbjct: 216 MYLSKLGDFMFVGDIVQGIIKATVFGFVIAVIGTYFGFNVTKGAEGVGKGTNLAVVWGMI 275 Query: 356 IVIIIDSLFAIFYFAI 371 V+++D F + Sbjct: 276 SVLVLDYFLTSFLVQV 291 >gi|196228069|ref|ZP_03126936.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196227472|gb|EDY21975.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 260 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 118/254 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S LG + + E C S ++RQ+ VG VV++ Sbjct: 2 VTTIGRIALSLLQYLGELATLVSETCVSLVVAPIRWRLVLRQIVEVGWRSQMVVVVTGGF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGAV+A Q FQ S+ G + ++++ RE+ +LT +M++GR G+AI AEIG+MK+ Sbjct: 62 TGAVLAAQAYFQFSRLGMKSAVGSMVAVSMFRELAPVLTGLMVSGRVGAAIAAEIGTMKV 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R++G+ L+ PR+ AL+ S+PLL +++ ++ DI A + Sbjct: 122 TEQIDALRSLGVHPTDYLVVPRVLALLFSMPLLVAECCAVSVLAGYVLGVHVLDISAAYY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 A ++ L K I +A +G + +G+ T VV V Sbjct: 182 VRNMLLYAGPRDLKMALTKGLVFGIVIVFIACHQGLKTSNGAVGVGRAPTEAVVNGSLAV 241 Query: 358 IIIDSLFAIFYFAI 371 +I++ + Sbjct: 242 LILNFFLTFALNMV 255 >gi|330827998|ref|YP_004390950.1| ABC transporter permease [Aeromonas veronii B565] gi|328803134|gb|AEB48333.1| ABC-type transporter, permease subunit [Aeromonas veronii B565] Length = 259 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 124/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I K +G A + + LI+Q+Y VGV V ++++ Sbjct: 6 ISKLGRVGVRFISSVGRATIMLFHALAGKPEPRKHFPLLIQQLYVVGVQSVAIILVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYNVLKDFGAEQSLGPLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +++PR WA +IS+PLL + + I G +V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAFMFSLIGIFGGKLVGVDWLGVDEGGF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I G IK+ A + +A+ G+ S + + T VV S Sbjct: 186 WSAMQASVDWHEDIMQGAIKSLIFALVVTWIALFNGYDAKPTSAGISQATTRTVVHSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFILTAVMFG 259 >gi|52425767|ref|YP_088904.1| hypothetical protein MS1712 [Mannheimia succiniciproducens MBEL55E] gi|52307819|gb|AAU38319.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 260 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 128/255 (50%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + LG + K LI+Q+Y +GV + +++L F Sbjct: 6 ISALGRNVINSVKALGRAGFMLFGSLVGKPQIKKHFPLLIKQLYVLGVQSLLIILLSGFF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVILVDFAAEANVGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +I++P+LT+L IIG ++ ++ I F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPVLTVLFTAVGIIGGHLIGVEWKGIDSGSF 185 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +S + +++ G IK+ A + +A+ G+ S + + T VV + +V Sbjct: 186 WSVMQNAVRTLDLWDGFIKSLVFAFTVTWIALFNGYDCIPTSEGISQATTRTVVNASLLV 245 Query: 358 IIIDSLFAIFYFAIG 372 + +D + F G Sbjct: 246 LGLDFVLTAIMFGAG 260 >gi|83945272|ref|ZP_00957621.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] gi|83851442|gb|EAP89298.1| ABC transporter, permease protein, putative [Oceanicaulis alexandrii HTCC2633] Length = 255 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 122/250 (48%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + G V G+ A+ + F L++Q++ +G +PVV L + T Sbjct: 5 RAIGAGLLALLRSAGAVALFAGQALAALVRPPYFGGQLVQQIFKIGFLSLPVVGLTALFT 64 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA +A S+F AE F +++++ +RE+G ++ A+M+AGR S I AEIG+M+ Sbjct: 65 GAALALNIYTGGSRFNAESFVPNIVAMGIVRELGPVIAALMLAGRVSSGIAAEIGAMRAT 124 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E+IDA+ T+ D +R LI+PR+ A ++ LP+L A+ I G +V D ++ Sbjct: 125 EQIDALHTLATDPMRYLIAPRVLAGVLVLPILVATADIIGIYGGYLVSVHTLDFNPTIYV 184 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + +I +GLIKA + ++ G+ + +G+ T VV + ++ Sbjct: 185 RNTWDFLSDWDIISGLIKAAVFGFILTLMGCYHGYYAQGGAQGVGRAATNAVVAAAVLIF 244 Query: 359 IIDSLFAIFY 368 + L + Sbjct: 245 AANFLLTSLF 254 >gi|99081621|ref|YP_613775.1| hypothetical protein TM1040_1780 [Ruegeria sp. TM1040] gi|99037901|gb|ABF64513.1| protein of unknown function DUF140 [Ruegeria sp. TM1040] Length = 260 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 116/250 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S + LG + + + + L + VG +PVV L + TG Sbjct: 11 GRASLGRLAALGRITRFAASTFSHMLRPPFYPRELANALLQVGWLSLPVVALTAIFTGGA 70 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +M++ E+I Sbjct: 71 LALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMRVTEQI 130 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ + ++ L++PR+ A ++++P+L + + I+G +V + D A + Sbjct: 131 DALVTLSTNPMKYLVAPRVLAALLTVPVLVGVGDIIGIMGGYVVATETLDFNAAAYLKNT 190 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 L +I + L+K ++ G G + +G+ V + +++ + Sbjct: 191 VDFLELRDIVSSLVKGAAFGTIAALMGCYYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250 Query: 362 SLFAIFYFAI 371 + +F++ Sbjct: 251 FVLTGVFFSL 260 >gi|114564530|ref|YP_752044.1| hypothetical protein Sfri_3369 [Shewanella frigidimarina NCIMB 400] gi|114335823|gb|ABI73205.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 261 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + K LI+Q+Y +GV + ++++ Sbjct: 7 IADIGKYALKIVLGYGRAGIMLWRAIVHVPRIKKGTPLLIKQVYVLGVRSMVIILVSGLF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L +FG E ++++ LRE+G ++ A++ AGR+GSA+ AEIG MK Sbjct: 67 IGMVLALQGYNILVEFGTEESLGPMVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKS 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + I+G +V ++ I F Sbjct: 127 TEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFSLVGILGGHLVGVEWKGIDSGAF 186 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I LIK+ + +A+ G+ V + + + T+ VVQ+ Sbjct: 187 WSILRASVEWREDIVNCLIKSVIFGVVVTWIALYRGYEVQPNPEGISRATTSTVVQASLA 246 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 247 VLALDFLLTAIMFG 260 >gi|83309431|ref|YP_419695.1| ABC-type transport system [Magnetospirillum magneticum AMB-1] gi|82944272|dbj|BAE49136.1| ABC-type transport system [Magnetospirillum magneticum AMB-1] Length = 271 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 2/264 (0%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 F +G++ V I + A +LG + G + L ++ Q + Sbjct: 7 PRGFIGFLDRLGRRAVAGIVEFGFGASLLGESLYWLGM--GGKRRQPVRLAPVVAQAMEI 64 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G+ +P+V ++S G ++A QG + L FGAE +++ +RE G L+T +++AGR Sbjct: 65 GIGALPIVTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGR 124 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA+ A +G+M+IN+EIDA+ MG+ VR L+ P + A++ LP LT+ ++ + A Sbjct: 125 SGSALAARLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMAMLPALTLWSDLVGLFAAG 184 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + I + L +I+ GL K+ + I +V + G +V + +G Sbjct: 185 LYIAPQLGSSMGAYVDEMTDLVRLNDIWHGLGKSAIFSVLITVVGVVNGASVTGGAEGVG 244 Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367 + T VV +IS ++I D +F Sbjct: 245 RMTTRSVVHAISAIVITDMIFVFM 268 >gi|303246386|ref|ZP_07332665.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302492096|gb|EFL51971.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 268 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 5/254 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + S LG + + +++Q+Y++GV + V++LI TG Sbjct: 15 LGRTALSILSELGGFFIFLCQGLWRILVPFPSVPKIVQQVYFIGVKSIFVIVLIGLFTGM 74 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG + L +FG+E +++ +RE+G +LTA+M+ GR+GS+I AEIG M+I+E+ Sbjct: 75 VLGLQGYYTLVKFGSEGLLGAAVALSIIRELGPVLTAIMLTGRAGSSIAAEIGIMRISEQ 134 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ TMG++ +R LI+PR+ A +I PLLT + + I G + I V+F R Sbjct: 135 IDALTTMGINPMRFLIAPRLAASLICFPLLTAIFDVVGIGGGYLTGVVLLGINPGVYFDR 194 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-----GVHSNSLGKKVTTCVVQSIS 355 + LA++ G K+ A + + EG+ G + + T+ VV S Sbjct: 195 IDAAVELADVTGGFEKSIVFALLVAAICCYEGYFTHTRREGFGAKGVSLATTSAVVVSCV 254 Query: 356 IVIIIDSLFAIFYF 369 V++ D + F Sbjct: 255 TVLVADYVLTSFLL 268 >gi|260772164|ref|ZP_05881081.1| uncharacterized ABC transporter permease component YrbE [Vibrio metschnikovii CIP 69.14] gi|260613031|gb|EEX38233.1| uncharacterized ABC transporter permease component YrbE [Vibrio metschnikovii CIP 69.14] Length = 263 Score = 182 bits (463), Expect = 6e-44, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I +F G + L L++Q+Y VGV + ++I+ Sbjct: 7 QAISRFGRRCLGVGESFGRASLMLFGALVGRPRPIQHLPLLMKQLYSVGVQSLAIIIVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGHLVGVDWKGIDQG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSVMQSSVELGRDIGNSVIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLALDFVLTALMFG 262 >gi|149918249|ref|ZP_01906741.1| putative ABC transporter, permease protein [Plesiocystis pacifica SIR-1] gi|149821009|gb|EDM80416.1| putative ABC transporter, permease protein [Plesiocystis pacifica SIR-1] Length = 273 Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 7/278 (2%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 + ++ +G I + I A + G + A + L Sbjct: 3 DPKSDAPPAKKPGIRDWAEGVGANINETIRWCGGMAVMFGQAM-------ARGPRRPWGL 55 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + Q+ +G+ +PV ++S G ++A Q L+ FGA + S+ +RE+ Sbjct: 56 FDISYQILQLGIRSIPVTTMMSIFVGMILAWQFGEALADFGATNSIGYVTSLALVRELVP 115 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L AV + + + + AE+GSMK+ E+IDAI +G D ++ L+ PR+ A +++PLL Sbjct: 116 TLLAVTVGTKMATGMTAELGSMKVTEQIDAIAALGADPIKKLVWPRLVAACVAMPLLVAW 175 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 N A++G ++ +DIP F++ + + KA GI+ +GF Sbjct: 176 GNVIAMLGGMLISEAVFDIPAGYFYNSYIDELEPIHYVMSQTKALVFGALAGIIGCYQGF 235 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + + ++G+ T V+ +V+I D + I Sbjct: 236 STKFGTEAVGQSTTETVIAVSVLVLIADFALTALFIPI 273 >gi|27364141|ref|NP_759669.1| ABC transporter permease YrbE [Vibrio vulnificus CMCP6] gi|320157526|ref|YP_004189905.1| ABC transporter permease YrbE [Vibrio vulnificus MO6-24/O] gi|27360259|gb|AAO09196.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio vulnificus CMCP6] gi|319932838|gb|ADV87702.1| uncharacterized ABC transporter permease component YrbE [Vibrio vulnificus MO6-24/O] Length = 262 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I S G A + + L L++Q+Y VGV + ++++ Sbjct: 8 ISALGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR+WA IIS+PLL ++ I G +V + I F Sbjct: 128 TEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 187 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 188 WSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|75907908|ref|YP_322204.1| hypothetical protein Ava_1687 [Anabaena variabilis ATCC 29413] gi|75701633|gb|ABA21309.1| Protein of unknown function DUF140 [Anabaena variabilis ATCC 29413] Length = 263 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 7/258 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + A LG G+ + K + QM VG + + +L + Sbjct: 5 KSSLGTWSQRLLAAIFLG------GQAIVHLLRGKIHWRNTREQMAAVGPDSLFIALLTA 58 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAV Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M Sbjct: 59 VFVGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTM 118 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ + I+G I+ Y I Sbjct: 119 RVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTGILGGLIIATNMYGISDT 178 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 VF + + +I + +IKA I I+ G + +G+ TT VV ++ Sbjct: 179 VFLDSARNLLEVWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALL 238 Query: 356 IVIIIDSLFA-IFYFAIG 372 I+ + + + + + G Sbjct: 239 IIFVSNFFLSWVMFQGTG 256 >gi|312959004|ref|ZP_07773523.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens WH6] gi|311286774|gb|EFQ65336.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens WH6] Length = 265 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +K+ F +LG G LI+Q++ VGV + ++++ Sbjct: 8 EKVRLFGRSGIDMVEVLGRSTIFLFHALLGRGGIGGGFGLLIKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSGYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ ++ T ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWGNMQNSVTFNGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|119510442|ref|ZP_01629575.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414] gi|119464864|gb|EAW45768.1| hypothetical protein N9414_01612 [Nodularia spumigena CCY9414] Length = 265 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 6/255 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + A LG G+ + K + + QM VG + + +L + Sbjct: 7 KSSLGAWSQRLLAAIFLG------GQVIVHLLRGKINWRNTVEQMAAVGPGSLFIALLTA 60 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAV Q A + FGA ++++ RE+ +LTAV++AGR GSA AEIG+M Sbjct: 61 VFVGAVFTIQVAREFINFGAANLVGGVLAVALTRELSPVLTAVVLAGRVGSAFAAEIGTM 120 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ + D + L+ PR+ A + LP+LT+L+ + I+G I+ Y I Sbjct: 121 RVTEQIDALFILKTDPIDYLVIPRLLACCLMLPILTLLSLITGILGGLIIATSIYGIADT 180 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 VF + + +I + LIKA I ++ G + +G+ TT VV S+ Sbjct: 181 VFLDSARNLVGIWDIISALIKACCFGLLIAVIGCSWGLTTKGGAKGVGQSTTTAVVTSLL 240 Query: 356 IVIIIDSLFAIFYFA 370 I+ + + F Sbjct: 241 IIFTSNFFLSWLMFQ 255 >gi|114798102|ref|YP_759452.1| hypothetical protein HNE_0724 [Hyphomonas neptunium ATCC 15444] gi|114738276|gb|ABI76401.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 261 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 126/252 (50%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G + G +++ + + ++RQ+ +G +PVV L + GA Sbjct: 10 GRATLGLFGEVGRLAVFAGRVKGAAFTPRWYGGEILRQIVRIGFYSLPVVGLAAVFIGAA 69 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A S++GAE F ++ + RE+GV++T +M+AGR + I AEIG+M++ E+I Sbjct: 70 LALNIYEGGSRYGAEQFVPSIVVLGITRELGVVITGLMLAGRVSAGIAAEIGAMRVTEQI 129 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ R L +PR A +I+LP+L LA+ ++G +V D V+ Sbjct: 130 DALETLSASRYRYLYAPRFIAALITLPMLVALADIIGVMGGWLVSVYGLDFDSTVYLRNT 189 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 TL +IF GLIKA I I+ +G + +G+ T +V + +++ + Sbjct: 190 LDFLTLNDIFAGLIKAVVFGGVIAIMGCYQGDRSQAGATGVGRAATLSMVGAAVLILAFN 249 Query: 362 SLFAIFYFAIGI 373 + + + IG+ Sbjct: 250 YVMSTVFVEIGL 261 >gi|303246825|ref|ZP_07333102.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] gi|302491842|gb|EFL51722.1| protein of unknown function DUF140 [Desulfovibrio fructosovorans JJ] Length = 254 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + ++ ++ + K +L S M ++G +P++ +IS G + Sbjct: 4 GEAATLVWLVSGLMRCARGTVNPLRRTKTYLRSRTWSHMAWIGADSLPIISIISACVGII 63 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q A QL + GA + +L+ + E+G LLT +++AGR+G+A AEI +M+I+EEI Sbjct: 64 LALQSATQLEKVGAMSYVANLVGYSIITELGPLLTCLILAGRAGAAFTAEIATMRISEEI 123 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+D VR L+ P+ A+ + PLLT+ + I I + +F + Sbjct: 124 DALEVMGVDPVRFLVWPKFAAMCVMAPLLTLWGDCIGISAGGIFSALALGLSGKAYFLQT 183 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T+ ++ +GL+K+ I I++ +GF + +G++ T VVQSI ++I++D Sbjct: 184 AGFLTMRDLLSGLVKSAGFGVTITIISCWQGFLAREGAADVGRRTTRAVVQSIFLMILLD 243 Query: 362 SLFAIF 367 F Sbjct: 244 LFFTAL 249 >gi|56751145|ref|YP_171846.1| putative ABC transporter permease [Synechococcus elongatus PCC 6301] gi|81299189|ref|YP_399397.1| hypothetical protein Synpcc7942_0378 [Synechococcus elongatus PCC 7942] gi|56686104|dbj|BAD79326.1| putative ABC transporter permease protein [Synechococcus elongatus PCC 6301] gi|81168070|gb|ABB56410.1| Protein of unknown function DUF140 [Synechococcus elongatus PCC 7942] Length = 264 Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 1/234 (0%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + QM VG S + + +L GAV Q A + FGA Sbjct: 24 GQVVLHLFRARIDPYNTREQMANVGPSSLLITLLTGVSVGAVFTIQVAREFINFGAGNIV 83 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 ++++ RE+ +LT V++AGR GSA AEIG+M++ E+IDA+ + D V L+ PR Sbjct: 84 GGILALALFRELAPVLTGVVVAGRIGSAFAAEIGTMQVTEQIDALLMLRTDPVDYLVVPR 143 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 A + +P+L + + S+V Y IP +VFF + ++ + LIKA Sbjct: 144 TLACCLMMPILCLGFGLIGVTAGSLVAQSAYGIPVSVFFDGIRNFLEPWDVVSSLIKAVI 203 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 + + G + +G+ T VV ++ ++ ++D + + + +G Sbjct: 204 FGWVVAAIGTNWGLTTTGGARGVGESTTGAVVTALLVIFVLDFFLSQLMFSGVG 257 >gi|148284291|ref|YP_001248381.1| ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] gi|146739730|emb|CAM79561.1| ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] Length = 301 Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 7/272 (2%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + IG++ +K + + L + + I+ Sbjct: 34 HLKHKMMNIILALKVIGQRTIKIFYNIILFQNFL-------FASIKGIFTLPYYFNITIQ 86 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 + +G +P+V S +GAV+A Q + + A ++ RE+G ++ + Sbjct: 87 AIINIGFYSLPIVAATSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGL 146 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR G++IVAEIG+M++ E+IDA+ T+ D ++ L++PR+ A +SLP L + ++ Sbjct: 147 IVAGRIGASIVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIG 206 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G +V + + T ++ +GLIKA IGI + G+ Sbjct: 207 VFGGYLVSVYRLNFNSYEYIQSTIHHLTSTDVISGLIKAIVFGMIIGITSCFHGYYSDKG 266 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV S ++++ + + + Sbjct: 267 AKGVGIATTYGVVHSSILILLSNYIMTELLLS 298 >gi|109896888|ref|YP_660143.1| hypothetical protein Patl_0560 [Pseudoalteromonas atlantica T6c] gi|109699169|gb|ABG39089.1| protein of unknown function DUF140 [Pseudoalteromonas atlantica T6c] Length = 259 Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 1/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + ++ G + +F I+Q+Y VGV + ++++ Sbjct: 2 QWLASIGRNTIDTVGSFGRAFLMLMGAIIAKPQFIKNTPLTIKQIYVVGVQSLLIIVVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR+WA IIS+P+L ++ + I+G +V + + Sbjct: 122 KATEQLSSLEMMAVDPLRRVVAPRLWAGIISMPMLALIFSAVGILGGHLVGVDWLGVDVG 181 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S S+ ++ G+IK A I +A+ +G+ S + K T VV S Sbjct: 182 SYWSIMQSSVDWNEDVVNGIIKTLVFAFVITWIAIFKGYDAVPTSEGISKATTETVVFSS 241 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ +D + F I Sbjct: 242 LAVLGLDFILTALMFGI 258 >gi|110639360|ref|YP_679569.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110282041|gb|ABG60227.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406] Length = 263 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 113/225 (50%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + F +K L +I Q Y VG+ +P++ L FVTG V +Q L FG Sbjct: 24 AFAFVALFFKQVFKPPFNLRQVIDQCYEVGIKSLPLITLTGFVTGLVFTKQSRPSLEVFG 83 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A + L+SI +R +G L+TA++ AG+ GS+I AE+GSMK+ E+IDA+ ++ + Sbjct: 84 ATSWLPSLISIALVRALGPLVTALICAGKVGSSIGAELGSMKVTEQIDAMEVSAINPFKY 143 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ R+ A + +L+ + ++GA + + FA FF S +IF+ + Sbjct: 144 LVVTRVLATTFMVSILSFYCSLVGLLGAFVNVHANDTTSFANFFQSGFSDINFIDIFSSV 203 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 K+ IGIV +GF + +GK VV ++ ++ + Sbjct: 204 TKSLVFGFTIGIVGCYKGFNATQGTRGVGKAANQAVVTAMFLIFV 248 >gi|310817867|ref|YP_003950225.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|309390939|gb|ADO68398.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 250 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 121/243 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +LG + TG + + + +L+ ++GV +P+ +L S G VI+ Sbjct: 4 VRQRLEVLGAMAMMTGRVFSRAVRPPYDWGALVYHTEFLGVRSMPIALLTSTFAGLVISL 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q F L++FG + ++ + RE+ +LTA+ + R GS + AE+G+M + E++DAI Sbjct: 64 QFGFFLARFGVQYTVGRVVVLTLFRELAPVLTALTVGARIGSGMAAELGAMTVTEQVDAI 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G D +R L+ PR+ A ++ +P LT+LA+ + ++V+ Y I F +FF Sbjct: 124 RALGADPLRKLVVPRVLACLLVMPTLTVLADVIGLGAGALVVNMQYAISFDLFFQGALDA 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + + +G+IK IG+V +G V + +G+ T V + V + D Sbjct: 184 VLMTDFVSGVIKGAIFGVIIGLVGCFKGLTVEGGTEGVGRATTQTVAITSVSVCLADFFI 243 Query: 365 AIF 367 Sbjct: 244 TKI 246 >gi|37678640|ref|NP_933249.1| ABC-type transport system, permease component [Vibrio vulnificus YJ016] gi|37197380|dbj|BAC93220.1| ABC-type transport system, permease component [Vibrio vulnificus YJ016] Length = 262 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 S G A + + L L++Q+Y VGV + ++++ G Sbjct: 11 LGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLFIGM 70 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 71 VLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 130 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D ++ +I+PR+WA IIS+PLL ++ I G +V + I F+S Sbjct: 131 LSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSA 190 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ L +I +IK A + +A+ G+ S + + T VV S V+ Sbjct: 191 MQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLG 250 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 251 LDFVLTALMFG 261 >gi|268316272|ref|YP_003289991.1| hypothetical protein Rmar_0705 [Rhodothermus marinus DSM 4252] gi|262333806|gb|ACY47603.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252] Length = 269 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 116/238 (48%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + G ++ G F ++ + LI QM G + + G V+A Q Sbjct: 20 RAFFEKAGGLVLFMGRFFRDVWRPPYEVRELINQMDEAGSKSFILTAVTGIAIGVVLAMQ 79 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L++FGAE +++++ +EIG ++T++++AGR G+ + AEIGSM++ E+IDA+ Sbjct: 80 SRGTLARFGAEAVLPNMLALSVFKEIGPVITSLVLAGRLGAGMAAEIGSMRVTEQIDALE 139 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 L L+ R+ A I+ P+LT N A+ G + D+ + +F++ S+ Sbjct: 140 VAALKPFHYLVITRVVACIVMFPVLTTWTNMIALAGGYVESVISADMDYRLFWNSAFSSL 199 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++ +K +GIV+ G+ V + +G+ VV S ++++ D + Sbjct: 200 RFSDLIVDTLKTSVFGFLVGIVSCYLGYTVRGGTREVGQAAMQAVVISSLLILLADVV 257 >gi|119776212|ref|YP_928952.1| hypothetical protein Sama_3080 [Shewanella amazonensis SB2B] gi|119768712|gb|ABM01283.1| putative membrane protein [Shewanella amazonensis SB2B] Length = 260 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 130/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + +Q +G S K + L++Q+Y VGV + ++++ Sbjct: 6 AVARLGRGAINQVAGMGRAGVMLWGAIFSVPKPQKGFPLLVKQLYVVGVQSLIIILVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 FIGMVLALQGYTILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ I G IV ++ I Sbjct: 126 STEQLSSLEMMAVDPLRQIIAPRFWAGVISMPLLALMFTAVGIWGGHIVGVEWKGIDNGA 185 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + K T+ VVQS Sbjct: 186 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYEVVPNPEGISKATTSTVVQSSL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 AVLALDFLLTALMFG 260 >gi|260779434|ref|ZP_05888325.1| uncharacterized ABC transporter permease component YrbE [Vibrio coralliilyticus ATCC BAA-450] gi|260604524|gb|EEX30824.1| uncharacterized ABC transporter permease component YrbE [Vibrio coralliilyticus ATCC BAA-450] Length = 263 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 1/262 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + + + G AS + L L++Q+Y VGV + Sbjct: 1 MLSDFANFVASTGRRAMGVCESFGRASLMLFGALASRPRPIQNLPLLVKQLYSVGVQSLI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++L G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 61 IIVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ ++ M +D ++ +I+PR WA +IS+P+L ++ I G +V + Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDW 180 Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 I F+S ++ L +I +IK+ A + +A+ G+ S + + T Sbjct: 181 KGIDHGSFWSAMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTR 240 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262 >gi|229588433|ref|YP_002870552.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360299|emb|CAY47156.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 265 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +K+ F +LG G L++Q++ VGV + ++++ Sbjct: 8 EKVRLFGRSGIDIVEVLGRSTIFLFHALLGRGGIGGGFGLLVKQLHAVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 VFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +++PR+WA ISLPLLTI+ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLTIIFSVVGIWGGSWVAVDWLGVYDG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 +++ ++ T ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWANMQNSVTFTGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|167835250|ref|ZP_02462133.1| ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 281 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 83/275 (30%), Positives = 142/275 (51%), Gaps = 2/275 (0%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + + + G+ + F +LG +I + + Sbjct: 8 REAPEPVVRIDPVTRFGQGLFTFGEHLYGGIALLGGLIVDLLSVLRRPRTMP--WTEISA 65 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y G +P+ L++F+ G V++ A QL FGA + ++++ + +RE+G +L+A+ Sbjct: 66 NVYAAGAKALPITALVAFLIGIVLSYLSAQQLQLFGANRYIVNILGLSVIRELGPVLSAI 125 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGRSGSAI A+IG M++ EE+DA+R MG+ + PR+ AL +++PLL + N A Sbjct: 126 LVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGLRITLPRVLALGVAMPLLVMWTNVIA 185 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G ++ I F S +AN+F GL K I +VA GF + + Sbjct: 186 LTGGALAAKFVLGIDLNFFVRSLPSVVPIANLFIGLGKGVVFGMLIALVACHFGFRIKAN 245 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 S SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 246 SQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 280 >gi|189184336|ref|YP_001938121.1| toluene export ABC transporter permease protein [Orientia tsutsugamushi str. Ikeda] gi|189181107|dbj|BAG40887.1| toluene export ABC transporter permease protein [Orientia tsutsugamushi str. Ikeda] Length = 288 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 120/272 (44%), Gaps = 7/272 (2%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + IG++ +K + + L + + I+ Sbjct: 21 HLKHKMMNIILALKVIGQRTIKIFYNIILFQNFL-------FASIKGIFTLPYYFNITIQ 73 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 + +G +P+V S +GAV+A Q + + A ++ RE+G ++ + Sbjct: 74 AIINIGFYSLPIVAATSLCSGAVLALQTYEGVVRSSAIHAIPMIIVTSITRELGPVIVGL 133 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR G+++VAEIG+M++ E+IDA+ T+ D ++ L++PR+ A +SLP L + ++ Sbjct: 134 IVAGRIGASMVAEIGTMRVTEQIDALFTLATDPIKYLVTPRLVATTLSLPFLVLTSDVIG 193 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + G +V + + T ++ +GLIKA IGI + G+ Sbjct: 194 VFGGYLVSVYRLNFNSYEYIQSTIHHLTSNDVISGLIKAIVFGMIIGITSCFHGYYSDKG 253 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +G T VV S ++++ + + + Sbjct: 254 AKGVGIATTYGVVHSSILILLSNYIMTELLLS 285 >gi|331011542|gb|EGH91598.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 265 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGGGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|71736723|ref|YP_276266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483485|ref|ZP_05637526.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627577|ref|ZP_06460531.1| putative ABC transport system permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647003|ref|ZP_06478346.1| putative ABC transport system permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71557276|gb|AAZ36487.1| toluene tolerance proteinTtg2B, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|330869989|gb|EGH04698.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987098|gb|EGH85201.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. lachrymans str. M301315] Length = 265 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|282891606|ref|ZP_06300097.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498574|gb|EFB40902.1| hypothetical protein pah_c180o100 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 262 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 123/244 (50%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N LG + + K + QM+ +GV +PVV + F TG V+ Sbjct: 2 NTMTKMLATLGDYFLLILKVIWVTIKRPPAWSLIRDQMFEIGVMSLPVVAITGFSTGLVL 61 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q FQLS G + +++ + E+G +LTA M+ GR G+++ AE+G+M++ E+ID Sbjct: 62 AAQSFFQLSDKGLASATGLMVTKAMMVELGPILTAFMVTGRVGASMCAELGTMRVTEQID 121 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R+M ++ +R LI+PR A LPLLTI + I+G ++ YY +P + F Sbjct: 122 ALRSMSVNPLRYLIAPRFIAGTTMLPLLTIFSCLMGILGGYLLSVYYYQMPPSTFLDPLP 181 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ +GLIKA I ++ G + + +G+ T VV S+++I + Sbjct: 182 LHIKTFDMVSGLIKAFIFGIIIITISCYRGLSTRGGAAGVGRATTNSVVICYSVILISNF 241 Query: 363 LFAI 366 + I Sbjct: 242 IITI 245 >gi|332038535|gb|EGI74978.1| uncharacterized ABC transporter, permease component YrbE [Pseudoalteromonas haloplanktis ANT/505] Length = 259 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 2/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K + + + LG A FK L+RQ+Y VG + ++++ G Sbjct: 7 KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E Sbjct: 67 MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ M +D ++ +I+PR WA IS+PLL ++ + AIIGA +V + + F+S Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLALIFSAVAIIGAHLVGVDWLGVDTGSFWS 186 Query: 300 RFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S + +I G+IK+ A + +A+ +G+ S + K T VV S V+ Sbjct: 187 IMQSQVSFQQDILNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246 Query: 359 IIDSLF-AIFYFA 370 D + A+ + + Sbjct: 247 GFDFILTAVMFTS 259 >gi|320330045|gb|EFW86032.1| putative ABC transport system permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 265 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|52841078|ref|YP_094877.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54293817|ref|YP_126232.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens] gi|54296863|ref|YP_123232.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris] gi|52628189|gb|AAU26930.1| toluene tolerance protein Ttg2B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750648|emb|CAH12055.1| hypothetical protein lpp0904 [Legionella pneumophila str. Paris] gi|53753649|emb|CAH15107.1| hypothetical protein lpl0873 [Legionella pneumophila str. Lens] gi|307609634|emb|CBW99138.1| hypothetical protein LPW_09231 [Legionella pneumophila 130b] Length = 260 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 1/251 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + N +G L Q+Y++GV ++++ + Sbjct: 5 IARLGNRGVQALQGIGSSGLFLFSMLFRKPNVLRLWPLLRYQLYFIGVLSCLIIVVSALF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L +FGA L+++ RE+G +++A++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ MG+D + ++ PR A I+LP+L ++ + AI G + + + F Sbjct: 125 TEQLSSMDMMGVDPLGRVVYPRFVAGFIALPILALIFSAVAIYGGYFIGVYWLGVDAGSF 184 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + +I +G+IK+ A + +++ +GF + + T VV S Sbjct: 185 WSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHATTKTVVYSSLA 244 Query: 357 VIIIDSLFAIF 367 V+ +D L Sbjct: 245 VLGLDFLLTAM 255 >gi|86137545|ref|ZP_01056122.1| membrane protein [Roseobacter sp. MED193] gi|85825880|gb|EAQ46078.1| membrane protein [Roseobacter sp. MED193] Length = 260 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 115/254 (45%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + ++G V T A + + L + +G +PVV L + Sbjct: 7 LARLGRSTLAALAMIGRVALFTVSAFAHMLRPPYYPRELALSLLQIGWLSLPVVALTAVF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ + ++ L++PR+ A ++++P+L + + I G V A + Sbjct: 127 TEQIDALVTLSTNPMQYLVAPRVLAALLTVPVLVGIGDIIGIAGGYTVSVHNLGFNSAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 ++ + L+K F + G G + +G + V + ++ Sbjct: 187 LKNTVDFLEPLDLISSLVKGAFFGVIAATMGCYYGMQSGRGAQGVGSATKSSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LATNFILTGVFFSL 260 >gi|311695326|gb|ADP98199.1| ABC-type transport system involved in resistance to organic solvents, permease component [marine bacterium HP15] Length = 260 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I F G + L++Q+Y VGV + +V++ Sbjct: 4 RIAAFGRLGLDIVSSFGRSGRFLAGVLGGVPRPATGFPLLMKQIYAVGVLSLAIVVVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 64 FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +I+PR+WA I++P+L ++ + I G +V + + Sbjct: 124 ATEQLSSMEMMGVDPLRRVIAPRLWAGFIAMPVLAVIFSVVGIWGGMLVGVDWLGVFEGS 183 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ S+ ++ G+IK+ +A+ +G+ S + T VV S Sbjct: 184 FWGNMQSSVDFVDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 AVLGLDFVLTAVMFG 258 >gi|189218795|ref|YP_001939436.1| organic solvents resistance ABC-type transport system permease component [Methylacidiphilum infernorum V4] gi|189185653|gb|ACD82838.1| organic solvents resistance ABC-type transport system permease component [Methylacidiphilum infernorum V4] Length = 258 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 120/254 (47%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + G + + S + F + Q+ +G +V++ Sbjct: 2 IYRVGSLFIKFLKATGEIFFLLLDTLYSFFSFPLRWRLFLMQILTIGAKSQIIVLVTGAF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGAV A Q F + G + ++++ LRE+G +L A+M++GR GSA+ AEI +MK+ Sbjct: 62 TGAVFAAQVQFHFGKLGMSSATGPVVTLAMLRELGPVLCALMVSGRVGSAMAAEISTMKV 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+R++G+ + LI PR L++S+PLL + + I+ +V + A + Sbjct: 122 TEQIDALRSLGVYVTQYLIVPRFLGLVVSMPLLVAITSGVGILCGYLVSVPLLGVEPAYY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + +L +++ G +K F I +++ G + + +G T +V S + Sbjct: 182 WENTIRFTSLDDVWMGELKGMFFGGLIVLISCYRGLNCQLSAEGVGIAATQAMVYSSIAI 241 Query: 358 IIIDSLFAIFYFAI 371 +I + F+ + Sbjct: 242 LISNFFFSFLMNIL 255 >gi|42524509|ref|NP_969889.1| ABC-type organic solvent resistance transport system permease protein [Bdellovibrio bacteriovorus HD100] gi|39576718|emb|CAE80882.1| ABC-type organic solvent resistance transport system permease protein [Bdellovibrio bacteriovorus HD100] Length = 275 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 4/257 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F+ G +I E + +IR M ++G + ++ L TG Sbjct: 18 FMGTLSEVVSSTGKIILFFNESVRLIFAKPSRFAEIIRHMEFIGNQSIGIICLTGGFTGL 77 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++ Q F A +++ RE+G +LT +++A R+G A+ A +G+M++NE+ Sbjct: 78 ALSLQLYLGFKLFNAVNMVGPTVALGITRELGPVLTGLIVAARAGGAMAARLGTMRVNEQ 137 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ + L+SPR+ A I +PLL + +F A++G+ + K + AVF+ + Sbjct: 138 IDALDVMGVNTKQYLVSPRLVAAFICMPLLVAVFDFVAMLGSWFLCVKMVGLDEAVFWQK 197 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + +I GL+K ++ GF + +G+ VVQS+ +II+ Sbjct: 198 IADFIEIRHINEGLLKGMVFGIYFALMCTYRGFNTTGGAKGVGEATNQGVVQSMVGIIIL 257 Query: 361 DSLFA----IFYFAIGI 373 D +FY +GI Sbjct: 258 DYFATNMIRLFYSLVGI 274 >gi|218439944|ref|YP_002378273.1| hypothetical protein PCC7424_3003 [Cyanothece sp. PCC 7424] gi|218172672|gb|ACK71405.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424] Length = 264 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ K K + + QM VG + + ++ + G V Q + + Sbjct: 18 LSAAILLGGQVFLHLLKNKIHHRNTLDQMAIVGPESLTISLVTAAFVGMVFTIQVSREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA + ++S+ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 YFGAGSYVGGVLSLALTRELAPVLTAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLKTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A + LP+LT+L+ + I G V Y+I VF + + ++ Sbjct: 138 IDYLVIPRVLACSLMLPILTVLSLLTGIAGGIAVAESLYNISPVVFLNSARNFLQTWDLV 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370 + +IK+ I ++ G + +G+ TT VV ++ + + + + + + Sbjct: 198 SCMIKSGIFGSLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFVANFFLSWLMFQG 257 Query: 371 IG 372 G Sbjct: 258 TG 259 >gi|283852492|ref|ZP_06369760.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] gi|283572100|gb|EFC20092.1| protein of unknown function DUF140 [Desulfovibrio sp. FW1012B] Length = 256 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 131/251 (52%), Gaps = 1/251 (0%) Query: 118 IVKFINDSCSQAHIL-GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + K ND+ + ++ GL+ + + M ++G +P++ +IS Sbjct: 1 MKKAGNDTATLVWLVTGLLACARASLSPLTRVKTYQRSRIWSHMAWIGADSLPIISIISA 60 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G ++A Q A QL + GA + +L+ + E+G LLT +++AGR+G+A AEI +M+ Sbjct: 61 CVGIILALQAATQLEKVGALSYVANLVGFSIITELGPLLTCLILAGRAGAAFTAEIATMQ 120 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+EEIDA+ MGLD VR L+ P+ A+ + PLLT+ + I + + + Sbjct: 121 ISEEIDALEVMGLDPVRFLVWPKFLAMCVMAPLLTLWGDAVGITAGGVFSALFLGLAGKA 180 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +F + T+ ++ GL+K+ AI IV+ +GF + +G++ T VV+SI + Sbjct: 181 YFLQTAHFLTMRDLLAGLVKSAGFGVAITIVSCWQGFLAKEGAADVGRRTTKAVVESIFL 240 Query: 357 VIIIDSLFAIF 367 +I++D F Sbjct: 241 MILLDLFFTAL 251 >gi|294793372|ref|ZP_06758517.1| putative membrane protein [Veillonella sp. 6_1_27] gi|294795191|ref|ZP_06760325.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294453983|gb|EFG22358.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294455803|gb|EFG24168.1| putative membrane protein [Veillonella sp. 6_1_27] Length = 254 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 9/263 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG+ ++ ++ S ++ I + +QM ++GV Sbjct: 1 MLSWLESIGRVVINGLSQMGSATLLVWQTIKQLKMINLWH---------VFQQMAHLGVD 51 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P++ L GAV+ Q L +GA+ LM++ RE+G +L V++AGR G+ Sbjct: 52 SLPIISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGA 111 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG+MK+ E+IDA+R M +D V L+ PR+ A +I +P+L I G V Sbjct: 112 AITAEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVA 171 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + + + +T+++ GLIK+ I +V +G + + ++G Sbjct: 172 TVIKGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFST 231 Query: 347 TTCVVQSISIVIIIDSLFAIFYF 369 T+ VV SI +V +++ + F Sbjct: 232 TSSVVTSIILVFVLNYFLSTLLF 254 >gi|325105498|ref|YP_004275152.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] gi|324974346|gb|ADY53330.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] Length = 260 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 115/240 (47%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F + + L LV F + +++Q Y +G + ++ L F+TG Sbjct: 7 GFRKKLNNIFYELYLVHKFIVRFFKELFSAPVEWKEIMKQCYLLGFKSLSLITLTGFITG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V +Q L++FGA + L++I +R + LLTA++ AG+ GS I AE+GSMK+ E Sbjct: 67 IVFTKQSRPSLAEFGATSWLPSLVAIAIIRSLAPLLTALITAGKVGSNIGAELGSMKVTE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ G + + L+ R A I++P+LT ++GA + + + + + F Sbjct: 127 QIDAMEVSGTNPFKFLVVTRTLATTITIPILTFYTGLVGLLGAFLNVTTFENTSYQAFMQ 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + +IF IKA IGIV +G+ + +G+ VV + +V + Sbjct: 187 SAFESISFLDIFASTIKAIVFGFTIGIVGCYQGYNSSKGTEGVGRAANASVVIGMFLVFL 246 >gi|269797585|ref|YP_003311485.1| hypothetical protein Vpar_0522 [Veillonella parvula DSM 2008] gi|282850033|ref|ZP_06259415.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] gi|269094214|gb|ACZ24205.1| protein of unknown function DUF140 [Veillonella parvula DSM 2008] gi|282580222|gb|EFB85623.1| conserved hypothetical protein [Veillonella parvula ATCC 17745] Length = 253 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 9/260 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG+ ++ ++ S ++ I + +QM ++GV +P Sbjct: 3 WLESIGRVVINGLSQMGSATLLVWQTIKQLKMINLWH---------VFQQMAHLGVDSLP 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ L GAV+ Q L +GA+ LM++ RE+G +L V++AGR G+AI Sbjct: 54 IISLTLLFAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGAAIT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+MK+ E+IDA+R M +D V L+ PR+ A +I +P+L I G V Sbjct: 114 AEIGTMKVTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATVI 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + + + +T+++ GLIK+ I +V +G + + ++G T+ Sbjct: 174 KGLAPSTYLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFSTTSS 233 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV SI +V +++ + F Sbjct: 234 VVTSIILVFVLNYFLSTLLF 253 >gi|254497755|ref|ZP_05110528.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12] gi|254353048|gb|EET11810.1| toluene tolerance protein Ttg2B [Legionella drancourtii LLAP12] Length = 260 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I + N H LG L Q+Y+VGV ++++ + Sbjct: 3 EFITRLGNRGTRVLHDLGTSGLFLFFMLFRRPNISRLWPLLCHQIYFVGVLSCLIIVVSA 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +FGA L+++ RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ MG+D + +I PR A I+LP+L+++ + AI+G + + + Sbjct: 123 KTTEQLSSMDMMGVDPLGRVIYPRFMAGFITLPVLSLIFSAVAILGGYFIGVHWLGVDAG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +G+IK+ A + +A+ +GF + + + T VV S Sbjct: 183 SFWSNMQAAVNFRIDVLSGIIKSLVFAFVVTWIAVFQGFECVPTAEGISQATTKTVVYSS 242 Query: 355 SIVIIIDSLFAIF 367 V+ +D L Sbjct: 243 LAVLGLDFLLTAM 255 >gi|70728304|ref|YP_258053.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens Pf-5] gi|68342603|gb|AAY90209.1| toluene tolerance ABC efflux transporter, permease [Pseudomonas fluorescens Pf-5] Length = 265 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ F +LG G L++Q++ VGV + ++++ Sbjct: 8 ERVRLFGRSGIDVLAVLGRSTLFLFHALLGRGGIGGSFGLLVKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA ISLPLL ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 +++ ++ T + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWANMQNSVTFSGDVLNGVIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|90413007|ref|ZP_01221005.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK] gi|90326022|gb|EAS42461.1| hypothetical protein P3TCK_24185 [Photobacterium profundum 3TCK] Length = 260 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G S + K L++Q+Y VGV + ++++ Sbjct: 6 IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + I G +V + I + F Sbjct: 126 TEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLAMMFSAVGIWGGQLVGVDWKGIDYGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I IK+ A I +A+ G+ S + + T VV S Sbjct: 186 WSVMQASVELGEDIGNSFIKSVVFAITITWIAVFNGYDAVPTSEGISRATTRTVVNSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTALMFG 259 >gi|304396326|ref|ZP_07378207.1| protein of unknown function DUF140 [Pantoea sp. aB] gi|304355835|gb|EFM20201.1| protein of unknown function DUF140 [Pantoea sp. aB] Length = 260 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + F G F+ LI+Q+Y VGV + ++++ Sbjct: 4 KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHTPLLIKQLYSVGVLSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLNTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|66047367|ref|YP_237208.1| hypothetical protein Psyr_4140 [Pseudomonas syringae pv. syringae B728a] gi|289676091|ref|ZP_06496981.1| putative ABC transport system permease protein [Pseudomonas syringae pv. syringae FF5] gi|63258074|gb|AAY39170.1| Protein of unknown function DUF140 [Pseudomonas syringae pv. syringae B728a] gi|330895265|gb|EGH27603.1| hypothetical protein PSYJA_00595 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937995|gb|EGH41776.1| hypothetical protein PSYPI_04838 [Pseudomonas syringae pv. pisi str. 1704B] gi|330969694|gb|EGH69760.1| hypothetical protein PSYAR_04288 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 265 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|171915264|ref|ZP_02930734.1| hypothetical protein VspiD_28855 [Verrucomicrobium spinosum DSM 4136] Length = 264 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 116/248 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G + + E + + + +Q+ +G VVI+ TGAV Sbjct: 8 GRLFLNFLIYMGQLAALLRELGIAIKSGVWRMRLVAQQIVSIGYGSQVVVIVTGAFTGAV 67 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q F+ FG E ++S+ RE+G +L +M+ GR G+A+ AEIG+MK+ E+I Sbjct: 68 FTAQTYFKFKDFGVETGVGAIVSVAMCRELGPVLAGLMVTGRVGAAMAAEIGTMKVTEQI 127 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+R +G+ V L+ PR +A++IS+PLL + + + V+ + +P A F+ Sbjct: 128 DALRALGVHPVDYLMLPRFFAMLISMPLLIAESITFGLAASYCVVVFGFGVPSAWFWQHV 187 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +I G+IK I +++ +G + +G T VV S ++I + Sbjct: 188 VEHTNEEDIIYGMIKGLIFGILITVISCHQGLTASDGAVGVGIGTTRAVVYSSLALLICN 247 Query: 362 SLFAIFYF 369 ++ Sbjct: 248 FFLSLLLN 255 >gi|268317890|ref|YP_003291609.1| hypothetical protein Rmar_2342 [Rhodothermus marinus DSM 4252] gi|262335424|gb|ACY49221.1| protein of unknown function DUF140 [Rhodothermus marinus DSM 4252] Length = 253 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 1/241 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + ++ LG ++ +FK + +L QM +G+ +P+V + + Sbjct: 1 MQSALSRFLLPFRALGQYTLLLVHAFSALGEFKTYRKNLFDQMVRIGIDSIPIVSMAAAF 60 Query: 178 TGAVIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +GAV+ Q A+QL F + +++ + E+ V++T ++AGR G+ I AE+G+M+ Sbjct: 61 SGAVMTVQTAYQLVSPFIPKTVIGAVVAPSMILELAVVVTGFILAGRVGARIAAELGTMR 120 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ MGL+ V L+ PR+ A ++ LP+L ++A F I+ +V + Sbjct: 121 VTEQIDALEAMGLNSVSYLVVPRVVAGMVMLPVLYVVACFVGIVSGILVANLGGFLSTGE 180 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + G+IKA I ++ +G+ + +G+ T V S Sbjct: 181 FLQGARQFFKPFDPIFGVIKAFVFGFVITSISCYKGYFTQGGAEGVGRSTTQAAVLSCVY 240 Query: 357 V 357 + Sbjct: 241 I 241 >gi|307105433|gb|EFN53682.1| hypothetical protein CHLNCDRAFT_10117 [Chlorella variabilis] Length = 256 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 116/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + K + + Q+ VG + V +L + G V Q + ++ Sbjct: 10 AAVVLGGQALVRILQGKIHWKNTLDQLNMVGPRSLGVCLLTAAFVGMVFTIQFIREFAKL 69 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D++R +G D V Sbjct: 70 GLTRSVGGVLALALSRELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPVD 129 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI+PR+ A +++ P+L +L + + ++ Y++ V + ++ T Sbjct: 130 YLITPRVMACMVAGPILNLLCFCMGMGASVLLADTVYNVSCNVILDSAMRAISSWDVITS 189 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK I V+ G+ + +G+ T+ VV S+ ++ + D ++ +F+ Sbjct: 190 MIKCWVFGTIIATVSCAWGYTTTGGAKGVGESTTSAVVISLVLIFVFDFALSLLFFS 246 >gi|298488498|ref|ZP_07006528.1| permease component of an ABC superfamily transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156839|gb|EFH97929.1| permease component of an ABC superfamily transporter [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 265 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|239904657|ref|YP_002951395.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239794520|dbj|BAH73509.1| putative ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 256 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 129/246 (52%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVILISFVTGAV 181 +D + ++ G K +L + I + +VG + +V +I+ G + Sbjct: 6 DDLGVLVGLAVDLMRCAGRALRPWRPEKPYLRARTISHLAWVGADSLAIVSVIAACVGII 65 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ Q A QL + GA + +L+ + E+G LLT ++++GR+G+A AEI +M+I+EEI Sbjct: 66 LSLQAAIQLEKVGAMSYVANLVGFSLVTELGPLLTCLILSGRAGAAFTAEIATMRISEEI 125 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG+D VR L+ P+ A+ + PLLT+ A+ I I + V+F++ Sbjct: 126 DALAVMGIDPVRFLVWPKFVAMAVMAPLLTLWADAVGITAGGIFSSLALGLSGKVYFNQI 185 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ +GL+K+ AI +++ +GF + +G++ T VVQSI ++I++D Sbjct: 186 AYFLGFKDLLSGLVKSAGFGVAITVISCWQGFLAREGAADVGRRTTAAVVQSIFVMILLD 245 Query: 362 SLFAIF 367 F Sbjct: 246 LFFTAL 251 >gi|262195117|ref|YP_003266326.1| hypothetical protein Hoch_1886 [Haliangium ochraceum DSM 14365] gi|262078464|gb|ACY14433.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 328 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 108/267 (40%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 P + S + + LG I + + L + Sbjct: 45 NPAEATAEESEGGFKRAVFTGVRDAFAPVPRFLDRLGEHIILAVRALSWLPRRPLRLANY 104 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Y+G +P+++L+ TGAV+A Q F FG E + E+ +L Sbjct: 105 LDAAEYIGFGSLPIILLVGLFTGAVMALQSVFAFRDFGLESMVGGVTGKALATELAPVLA 164 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A+M+ GR+ + I E+G+M+I+E+IDA+ +M ++ ++ L+ PR+ A P+LT++ Sbjct: 165 ALMLTGRAAAGIATELGTMRISEQIDALESMAVNPIQFLVLPRLVAGFFMAPILTLIFFV 224 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + GA V + F ++ G++K+ + ++ +GF Sbjct: 225 IGMGGAYFVSVISEGVDHGQFVHNTKDILNFVDVLQGILKSAVFGFVVVLIGCYQGFFAS 284 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSL 363 +G T VV V+I D Sbjct: 285 GGGRGVGLGTTRAVVIGSVTVLITDYF 311 >gi|148360512|ref|YP_001251719.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby] gi|296106421|ref|YP_003618121.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy] gi|148282285|gb|ABQ56373.1| toluene tolerance protein Ttg2B [Legionella pneumophila str. Corby] gi|295648322|gb|ADG24169.1| toluene tolerance protein [Legionella pneumophila 2300/99 Alcoy] Length = 260 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 1/251 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + N +G L Q+Y++GV ++++ + Sbjct: 5 IARLGNRGVQALQGIGSSGLFLFSMLFRKPNVLRLWPLLRYQLYFIGVLSCLIIVVSALF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L +FGA L+++ RE+G +++A++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVVGLQGYNTLQKFGASSQLGQLLALSVARELGPVISALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ MG+D + ++ PR A I+LP+L ++ + AI G + + + F Sbjct: 125 TEQLSSMDMMGVDPLGRVVYPRFAAGFIALPILALIFSAVAIYGGYFIGVYWLGVDAGSF 184 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + +I +G+IK+ A + +++ +GF + + T VV S Sbjct: 185 WSNMQAAVNFRIDILSGIIKSLVFAFVVTWISVYQGFECVPTAEGISHATTKTVVYSSLA 244 Query: 357 VIIIDSLFAIF 367 V+ +D L Sbjct: 245 VLGLDFLLTAM 255 >gi|209526324|ref|ZP_03274853.1| protein of unknown function DUF140 [Arthrospira maxima CS-328] gi|209493253|gb|EDZ93579.1| protein of unknown function DUF140 [Arthrospira maxima CS-328] Length = 261 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 6/257 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + LG G+ + K + + QM VG + + +L + Sbjct: 7 RSSLGIWTQRFIASLFLG------GQVLLHILQGKIHRRNTLEQMAIVGPESLFIALLTA 60 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V Q A + GA ++++ RE+ +LT+V+IAGR SA AE+G+M Sbjct: 61 SFVGMVFTIQVAQEFITLGAGHLVGGILALSLSRELTPVLTSVIIAGRVCSAFAAELGTM 120 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ M D V L+ PR+ A + LPLLTI+ + + G ++ +Y+IP Sbjct: 121 RVTEQIDALYIMKTDPVDYLVIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSV 180 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +F L ++ + IK+ AI ++ G + +G+ TT VV S+ Sbjct: 181 LFLDSIRDLMGLWDLISAEIKSLVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLL 240 Query: 356 IVIIIDSLFAIFYFAIG 372 + I+D + F + Sbjct: 241 AIFILDFFLSWLLFKVA 257 >gi|90580197|ref|ZP_01236004.1| hypothetical protein VAS14_19736 [Vibrio angustum S14] gi|90438499|gb|EAS63683.1| hypothetical protein VAS14_19736 [Vibrio angustum S14] Length = 260 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + +G S + + LI+Q+Y VGV + ++++ Sbjct: 5 AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIILVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYLVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + + GA IV + I + Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ + +I +IKA A + +A+ G+ S + + T VV S Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTALMFG 259 >gi|323498697|ref|ZP_08103687.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326] gi|323316253|gb|EGA69274.1| hypothetical protein VISI1226_21911 [Vibrio sinaloensis DSM 21326] Length = 262 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + G AS K L L++Q+Y VGV + +++L Sbjct: 8 VASTGRRALAVLESFGRASLMLFGALASKPKPIQNLPLLVKQLYSVGVQSLLIIVLSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G V + I F Sbjct: 128 TEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQSVGVDWKGIDHGSF 187 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I +IK+ A + +A+ G+ S + + T VV S Sbjct: 188 WSTMQASVELGQDIGNSMIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|254468843|ref|ZP_05082249.1| ABC-type transporter, permease component involved in toluene tolerance [beta proteobacterium KB13] gi|207087653|gb|EDZ64936.1| ABC-type transporter, permease component involved in toluene tolerance [beta proteobacterium KB13] Length = 259 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K S+ LG + S IR++Y+ GV + ++++ +F G Sbjct: 7 KIGGAIRSKITRLGAATRLFFSIISYSSDSFKRFNLTIREIYFTGVLSLVIIVVSAFFVG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+AI AEIG MK E Sbjct: 67 MVLGLQGYYTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGTAITAEIGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M + + +++PR WA II++PLL + + I+G +V + F+S Sbjct: 127 QLSAMEMMAVSPIARIVAPRFWAGIITMPLLASIFSMVGILGGYVVAVPMIGVDEGAFWS 186 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + +I G IK+ A I+A+ EG+ + + + T VV S V+ Sbjct: 187 QMQANVDFNYDIVNGFIKSVVFGIACTIIALFEGYDAPPTAEGVSRATTRTVVTSSLAVL 246 Query: 359 IIDSLFAIFYFAI 371 +D + F + Sbjct: 247 GLDFVLTSFMLTV 259 >gi|88658302|ref|YP_506914.1| hypothetical protein ECH_0084 [Ehrlichia chaffeensis str. Arkansas] gi|88599759|gb|ABD45228.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Arkansas] Length = 275 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 7/260 (2%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 L IG+ ++ I + G +F + + + +++Q + +P Sbjct: 23 LLETIGRYVINVIFNV-------GHSFIFFVKFVYNCFVPPYYYGVILKQFIEIFFFSLP 75 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V + + TGAV+ Q + + + F ++ + +RE+G +L ++IAGR G+AI Sbjct: 76 IVGITAIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIA 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG+M+I E+IDA+ T+ + + L+ PRI + ++++P+L + A+ G IV Sbjct: 136 AEIGTMRITEQIDALFTLDTNPFKYLVVPRIISAMVAMPILILCADLIGAYGGYIVGSYQ 195 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ ++ GL+KA I + G+ + +G T Sbjct: 196 LGYTSEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYYCSGGARGVGLATTYV 255 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV S +I+ + + +FY Sbjct: 256 VVVSSMFIILFNYIITVFYS 275 >gi|255020159|ref|ZP_05292228.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756] gi|254970301|gb|EET27794.1| hypothetical protein ACA_0896 [Acidithiobacillus caldus ATCC 51756] Length = 260 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 1/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG + +RQ+Y GV + ++++ +F TG Sbjct: 9 ELGRVVRESVPRLGAASRFLLLGLGRVVHRHFSIQQWLRQVYGFGVLSLALMVVAAFFTG 68 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L +FGA L+++ LRE+G +LTA++ AGR+GSA+ AEI +MK E Sbjct: 69 MVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAGSALTAEIATMKATE 128 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M +D + ++SPR+WA + ++P+L ++ + I G ++ + F+S Sbjct: 129 QLSAMEMMAVDPLAWVVSPRLWAAVFTVPILCVIFDLVGIFGGYLIAVPVLGVDSGTFWS 188 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + S + +I GL KA + +A +G++ + +G T VV + V+ Sbjct: 189 QMQSNVSFRGDILNGLFKALCFGLVVAWIAAWQGYSAKPTAEGVGNATTRSVVAASLAVL 248 Query: 359 IIDSLFAIFYFA 370 +D + F+ Sbjct: 249 GLDFILTALLFS 260 >gi|313109004|ref|ZP_07794978.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa 39016] gi|310881480|gb|EFQ40074.1| hypothetical protein PA39016_001650017 [Pseudomonas aeruginosa 39016] Length = 240 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 144/241 (59%), Gaps = 2/241 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G +I +++ S+I Q+ V +P+V L+SF+ G V+A GA L+ Sbjct: 1 MGQIIETWSRTVRHPRRWRA--TSVIAQIQRSAVDAIPIVALLSFMVGMVVAFLGATVLA 58 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA IFS+ L++ +RE GVLL A++IAGR+ SA A+IGSMK NEEIDA+R+ LD Sbjct: 59 NFGASIFSVHLVAFSFMREFGVLLPAILIAGRTASAYTAQIGSMKANEEIDALRSNALDP 118 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + +L+ PR+ AL++SLPLLT++ + I G + V +IP A F + + + Sbjct: 119 IELLVLPRVLALLVSLPLLTLVGILAGIAGGATVCALSLEIPPAQFLAIVQEKIEVRHFL 178 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G+ K+P A I + EGF V + S+G T+ VVQSI +VI+ID++ A+F+ + Sbjct: 179 VGMSKSPLFAVMIAAIGCHEGFKVAGSAESVGDHTTSSVVQSIFMVILIDAIAALFFMEM 238 Query: 372 G 372 G Sbjct: 239 G 239 >gi|302185305|ref|ZP_07261978.1| putative ABC transport system permease protein [Pseudomonas syringae pv. syringae 642] Length = 265 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|304310283|ref|YP_003809881.1| Toluene tolerance ABC efflux transporter, permease [gamma proteobacterium HdN1] gi|301796016|emb|CBL44220.1| Toluene tolerance ABC efflux transporter, permease [gamma proteobacterium HdN1] Length = 260 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 128/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + D +G + + L++Q+Y +GV + ++++ Sbjct: 3 EWLRRIGADGLGTLRTIGAAGIFLFNALWALPNPRSGTPLLVKQIYSIGVLSLVIIVVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+QFG+E L+++ LRE+G ++ A++ AGR+GSA+ AEIG M Sbjct: 63 VFIGMVLALQGYHILTQFGSEEALGQLVALSLLRELGPVVAALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ + +G+D +R +I+PR WA I +P L ++ + +IGA +V K+ + Sbjct: 123 KATEQLASFEMIGVDPLRRIIAPRFWAGFICMPTLAVIFSAVGVIGAYLVGVKWLGVYDG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ ++ ++ G+IK+ + +A+ +G+ S + + T VV S Sbjct: 183 SFWANMQNSVEWGEDVVNGVIKSFAFGAVVTWIAVFQGYDCIPTSEGISRATTRTVVFSS 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 LAVLGLDFILTAVMFG 258 >gi|119469173|ref|ZP_01612157.1| putative transport protein (ABC superfamily, membrane) [Alteromonadales bacterium TW-7] gi|119447425|gb|EAW28693.1| putative transport protein (ABC superfamily, membrane) [Alteromonadales bacterium TW-7] Length = 259 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 2/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 K + + + LG A FK L+RQ+Y VG + ++++ G Sbjct: 7 KLGHKTLGRFAALGRSAYMLFSALAHVPNFKKGTPLLVRQLYMVGSQSLLIIMVSGLFIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E Sbjct: 67 MVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ M +D ++ +I+PR WA IS+PLL I+ + AIIGA +V + + F+S Sbjct: 127 QLSSLEMMAIDPLKRIIAPRFWAGFISMPLLAIIFSAVAIIGAHLVGVDWLGVDTGSFWS 186 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S + ++ G+IK+ A + +A+ +G+ S + K T VV S V+ Sbjct: 187 IMQSQVSFQADVLNGIIKSFVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLAVL 246 Query: 359 IIDSLF-AIFYFA 370 D + A+ + + Sbjct: 247 GFDFILTAVMFTS 259 >gi|89093955|ref|ZP_01166900.1| probable permease of ABC transporter [Oceanospirillum sp. MED92] gi|89081841|gb|EAR61068.1| probable permease of ABC transporter [Oceanospirillum sp. MED92] Length = 259 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + G + + + L++Q+Y+VGV + ++++ G Sbjct: 7 LGRHGLDRLAAFGRSSMILFQALVAKPQPLMMFPLLVQQIYFVGVLSLIIIVVSGLFIGM 66 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L +G+E ++++ +RE+ ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 67 VLGLQGYTILVDYGSEQAVGQMVALSLVRELAPVVTALLFAGRAGSALTAEIGLMKATEQ 126 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ +G+D +R +I+PR WA I LP+L+ + + G ++V + I F++ Sbjct: 127 LSSLEMIGVDPLRRIIAPRFWAGFICLPILSAIFAIVGVYGGALVSIDWLGIYDGSFWAN 186 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ ++ GL+KA + +A+ +G+ S + + T VV S V+ Sbjct: 187 MQNSVNFYEDVMNGLVKAVVFGFVVTWIAVFQGYDCIPTSEGISQATTKTVVYSSLAVLG 246 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 247 LDFILTAVMFG 257 >gi|289523217|ref|ZP_06440071.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503760|gb|EFD24924.1| STAS domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 259 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + S +LG + S + + L S+ QM VGV V +V +IS Sbjct: 3 KWLETLGKATASFLDLLGWIASLAFHVLVHLPRARVDLRSVTDQMERVGVQSVFMVSVIS 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+A Q Q +FGA + ++++ +RE+ +LT +++AGR GS++ AEIG+M Sbjct: 63 AFTGMVMAVQTLDQFLKFGASGYIGGVIALSMIREMSPVLTGIVVAGRVGSSMAAEIGTM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E++DA+R GLD + PRI A ++ +P+LTI + G + + Sbjct: 123 KVTEQLDALRAFGLDEYVFVGVPRILASLVMVPILTIFSMTVGTFGGYLYVAFRGIH-PL 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +F + +I GL+K+ I IVA GF + +G+ T VV S Sbjct: 182 IFKDSITLLVNVYDINGGLLKSLVYGFVISIVACACGFRAEGGAKGVGETTTLAVVWSNM 241 Query: 356 IVIIIDSLFAIFYFA 370 +++I++ + + F Sbjct: 242 LILILNYMLSTLLFG 256 >gi|292486812|ref|YP_003529682.1| hypothetical protein EAMY_0324 [Erwinia amylovora CFBP1430] gi|292900790|ref|YP_003540159.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291200638|emb|CBJ47770.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291552229|emb|CBA19266.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora CFBP1430] gi|312170880|emb|CBX79139.1| UPF0393 inner membrane protein yrbE [Erwinia amylovora ATCC BAA-2158] Length = 260 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + LG +F+ L++Q+Y +GV + +V++ Sbjct: 4 QALALLGRQGIRFCASLGRAGLMLFHALFGIPRFRRHAPLLVKQLYSIGVLSLLIVVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLKTYGAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGTLVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + L +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 YFWSAMQNAVDLQTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|308189078|ref|YP_003933209.1| ABC transport system, permease protein yrbE [Pantoea vagans C9-1] gi|308059588|gb|ADO11760.1| Putative ABC transport system, permease protein yrbE [Pantoea vagans C9-1] Length = 260 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + F G F+ LI+Q+Y VGV + ++++ Sbjct: 4 KALASFGRQGIETCASFGRAGLMLFHALVGKPAFRRHSPLLIKQLYSVGVLSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLTMIFTAVGIAGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRTDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|323491744|ref|ZP_08096921.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546] gi|323314000|gb|EGA67087.1| hypothetical protein VIBR0546_01054 [Vibrio brasiliensis LMG 20546] Length = 262 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 1/261 (0%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 + + + S G AS + L LI+Q+Y VGV + + Sbjct: 1 MAGLANFVASVGRRALSVTESFGRASLMLFGALASKPQPIKNLPLLIKQLYTVGVQSLII 60 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++L G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ A Sbjct: 61 IVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTA 120 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + Sbjct: 121 EIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLVMIFMAVGIWGGQLVGVDWK 180 Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 I F+S ++ L +I +IK+ A + +A+ G+ S + + T Sbjct: 181 GIDHGSFWSAMQASVELGQDIGNSMIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRT 240 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 VVHSSLAVLGLDFVLTALMFG 261 >gi|312881882|ref|ZP_07741649.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370461|gb|EFP97946.1| hypothetical protein VIBC2010_12694 [Vibrio caribbenthicus ATCC BAA-2122] Length = 263 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + G + + LIRQ+Y VGV + +++L Sbjct: 9 TASTGQRALQICESFGRASLMLWGALVNRPQPLKNAPLLIRQLYSVGVQSLLIIVLSGLF 68 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 69 IGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 128 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR WA +IS+P+L ++ I G +V + I F Sbjct: 129 TEQLSSLEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDWKGIDNGSF 188 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I LIK+ A + VA+ G+ S + + T VV S Sbjct: 189 WSAMQASVELGQDIGNSLIKSMVFAFTVTWVALFNGYDAVPTSEGISRATTRTVVHSSLA 248 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 VLGLDFVLTALMFG 262 >gi|330950264|gb|EGH50524.1| hypothetical protein PSYCIT7_02422 [Pseudomonas syringae Cit 7] Length = 265 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVSLLGRSAIDIVTVLGRSGLFLVHALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|170077985|ref|YP_001734623.1| hypothetical protein SYNPCC7002_A1371 [Synechococcus sp. PCC 7002] gi|169885654|gb|ACA99367.1| conserved hypothetical protein TIGR00056 [Synechococcus sp. PCC 7002] Length = 264 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 1/242 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L G+ + + I QM VG + + ++ + G V Q A + Sbjct: 18 LVAATLLGGQVIVHLLRGRFNRRITIEQMAAVGPDSLLIALVTAGFVGMVFTIQVAREFI 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++ + RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 YFGAGTAVGGVLGLSLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALHILRTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR A + LPLLT+L+ + + G I+ Y IP ++F + S +I Sbjct: 138 IDYLVVPRFLACCLMLPLLTVLSLLTGMAGGLIIAINLYQIPQSIFINSAQSFLEYWDII 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFA 370 + +IK+ I ++ G + +G+ TT VV S+ + I + + + + Sbjct: 198 SAMIKSVVFGGLIAVIGCSWGLTTTGGAKGVGQSTTTAVVTSLLAIFIANFFLSWLMFQG 257 Query: 371 IG 372 +G Sbjct: 258 LG 259 >gi|59711002|ref|YP_203778.1| toluene ABC transporter membrane protein [Vibrio fischeri ES114] gi|59479103|gb|AAW84890.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Vibrio fischeri ES114] Length = 264 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + + S G + + L++Q+Y VGV + ++++ Sbjct: 9 SIEQIGRRALSVCEAFGRATFMLLGAIFAKPQPIKMFPLLLKQLYSVGVLSLVIIVVSGL 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G VI+ QG L +GAE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 69 FIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E+I ++ M +D +R +I+PR+WA IIS+P+L ++ I G IV ++ I + Sbjct: 129 TTEQISSMEMMAVDPLRQIIAPRLWAGIISMPVLAVIFMAVGIWGGQIVGVEWKGIDYGS 188 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ + +I LIK A + +A+ G+ S + T VV S Sbjct: 189 FWSVMQSSVDVRYDIINSLIKCVVFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ ID + F Sbjct: 249 AVLGIDFVLTALMFG 263 >gi|288801493|ref|ZP_06406945.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str. F0039] gi|288331574|gb|EFC70060.1| ABC transporter, permease [Prevotella sp. oral taxon 299 str. F0039] Length = 248 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 LG I G + + + F I++M +GV + +V+LISF GAVI Q Sbjct: 6 YLTSLGEYIMLMGRSFSRPERMRMFFKRYIKEMSSLGVDSIGIVLLISFFIGAVICIQMK 65 Query: 188 FQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + + + + E + ++++G+ GS I +E+G+M++ ++IDA+ Sbjct: 66 LNIQSPWMPRWVSGYTTREILILEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDI 125 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I L+ +P L I ++ + I+GA + + + + Sbjct: 126 MGINSASYLIMPKILGLVTIMPFLVIFSSVTGILGAYATAYIGHILSPEDLTLGLQHSFN 185 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ +IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 186 PWFVWMSIIKSLFFAFIIASVSSYYGYTVQGGSVEVGKSSTDAVVSSSILILFSDVFLTQ 245 Query: 367 FYF 369 Sbjct: 246 ILS 248 >gi|260886513|ref|ZP_05897776.1| toluene tolerance ABC efflux transporter, permease [Selenomonas sputigena ATCC 35185] gi|330839644|ref|YP_004414224.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC 35185] gi|260863656|gb|EEX78156.1| toluene tolerance ABC efflux transporter, permease [Selenomonas sputigena ATCC 35185] gi|329747408|gb|AEC00765.1| protein of unknown function DUF140 [Selenomonas sputigena ATCC 35185] Length = 256 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 1/254 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + K + + +G VI + + QM ++GV +V L Sbjct: 4 RLLEKIGSFVLERFEWVGSVILLLAAAVKEMCR-PLRFRHIFAQMSHLGVDSFAIVSLTM 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ Q A + +FGA+ +++I RE+G +L V+ AGR GSAI AEI +M Sbjct: 63 LFTGMVMTLQVAHEFIRFGAQSTIGGVIAIAIGRELGPVLVGVVCAGRVGSAITAEISTM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+R M + L+ PR+ A + +PLLTI + + G V Y I Sbjct: 123 KVTEQIDALRVMATSPIGYLVVPRMIACMCMVPLLTIFGDVIGVFGGWFVAVHYAGIASY 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F + H A ++ GLIKA I ++ G + +G+ T VV +I Sbjct: 183 TFTNSIHVFAVPHDVTGGLIKAAVFGIVIAVLGAWYGLHAPEGAEGVGRATTKSVVAAIV 242 Query: 356 IVIIIDSLFAIFYF 369 + ++ + + Sbjct: 243 CIFFLNVFLSFLLY 256 >gi|58039399|ref|YP_191363.1| ABC transporter permease protein [Gluconobacter oxydans 621H] gi|58001813|gb|AAW60707.1| ABC transporter permease protein [Gluconobacter oxydans 621H] Length = 261 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 107/238 (44%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + E + + + + G +PVV L + Sbjct: 8 IAALGRAALGLIKQAGALALFALEALSHLVRPPFYWRIFFSSLIETGFFSLPVVALTALF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +GAVIA Q Q+ + ++ + RE+G +L +M+AGR G+A+ A+IG+M++ Sbjct: 68 SGAVIALQSYVGFGQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMSAQIGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ + ++ L++PR+ A ++LP L ++A+ ++G V + + Sbjct: 128 TDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVMGGFTVSVAKLGFSPSTY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + ++ GL+KA I ++ G+ + +G T VV + Sbjct: 188 ITATLDSLKTMDVVVGLVKAAVFGFLIALLGCYNGYNSRGGAEGVGSATTAAVVGASI 245 >gi|213966604|ref|ZP_03394755.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301383114|ref|ZP_07231532.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato Max13] gi|302058647|ref|ZP_07250188.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato K40] gi|302133824|ref|ZP_07259814.1| putative ABC transport system permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928454|gb|EEB61998.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|330877179|gb|EGH11328.1| hypothetical protein PSYMP_16986 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964018|gb|EGH64278.1| hypothetical protein PSYAC_05120 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331016694|gb|EGH96750.1| hypothetical protein PLA106_11700 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 265 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L++Q+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLVKQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTKTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|297603137|ref|NP_001053506.2| Os04g0553000 [Oryza sativa Japonica Group] gi|38345475|emb|CAE01691.2| OSJNBa0010H02.13 [Oryza sativa Japonica Group] gi|255675668|dbj|BAF15420.2| Os04g0553000 [Oryza sativa Japonica Group] Length = 344 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 98 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 157 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 158 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 217 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 218 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 277 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 278 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 333 >gi|170728557|ref|YP_001762583.1| hypothetical protein Swoo_4232 [Shewanella woodyi ATCC 51908] gi|169813904|gb|ACA88488.1| protein of unknown function DUF140 [Shewanella woodyi ATCC 51908] Length = 260 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 2/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + G A + KG ++Q+Y VGV + ++ + Sbjct: 6 RVANLGRAAIELVIGFGSAGLMLWGAIARKPRAKG-FPLFVKQLYVVGVQSMVLIFVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA ++SLPLL ++ I G IV ++ I Sbjct: 125 STEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHIVGVEWKGIDSGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ +I LIK+ A + +A+ G+ V + + K T VVQS Sbjct: 185 FWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYQVIPNPEGISKATTQTVVQSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 245 AVLALDFLLTALMFG 259 >gi|222055035|ref|YP_002537397.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221564324|gb|ACM20296.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 257 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N S + + + + Q+ +GV + +VIL TG V+ Sbjct: 8 NTLKSFVLEVQELFFLSTRAIGCIVTPPFYYRDFTTQLDKIGVGSLFIVILTGLFTGMVM 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + ++++ ++E+G +L+++M+AGR GSAI AE+G+M + E++D Sbjct: 68 ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSAITAELGTMVVTEQVD 127 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ G D ++ L++ R+ A++I++PLL I+ + +++G I+ YDI +++ Sbjct: 128 AMQVEGTDIIKRLVTSRLKAIVIAMPLLAIITDAVSLVGGYIMA-ANYDINIIMYWKSIP 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ G++K I +V G + + +G+ VV S +++ D Sbjct: 187 QFMVFQDLIEGVVKPAVFGFIIAMVGCHVGLSTNGGAAGVGESAKRAVVISSVSILVTDF 246 Query: 363 LFAIFY 368 A + Sbjct: 247 FIAKIF 252 >gi|197335795|ref|YP_002155152.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11] gi|197317285|gb|ACH66732.1| toluene tolerance protein Ttg2B, putative [Vibrio fischeri MJ11] Length = 264 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + + S G + + L++Q+Y VGV + ++++ Sbjct: 9 SIEQIGRRALSVCEAFGRATFMLLGAIFAKPQPIKMFPLLLKQLYSVGVLSLVIIVVSGL 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G VI+ QG L +GAE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 69 FIGMVISLQGYIILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E+I ++ M +D +R +I+PR+WA IIS+P+L ++ I G IV ++ I + Sbjct: 129 TTEQISSMEMMAVDPLRQIIAPRLWAGIISMPILAVIFMAVGIWGGQIVGVEWKGIDYGS 188 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ + +I LIK A + +A+ G+ S + T VV S Sbjct: 189 FWSVMQSSVDVRYDIVNSLIKCVVFAFIVTWIALFNGYDATPTSEGISLATTRTVVHSSL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ ID + F Sbjct: 249 AVLGIDFVLTALMFG 263 >gi|237798606|ref|ZP_04587067.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021459|gb|EGI01516.1| hypothetical protein POR16_07195 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 265 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG LI+Q+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLIKQLYSVGVMSLVIIVVSGV 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|77457091|ref|YP_346596.1| hypothetical protein Pfl01_0864 [Pseudomonas fluorescens Pf0-1] gi|77381094|gb|ABA72607.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 132/256 (51%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 +++ +F + G G L++Q++ VGV + ++++ Sbjct: 8 ERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSLVIIVVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG LS +G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+M Sbjct: 68 IFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D ++ +I+PR+WA ISLP+L ++ + I G S V + + Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSVVGIWGGSWVAVDWLGVYEG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 188 SYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYAS 247 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 LAVLGLDFILTALMFG 263 >gi|78485324|ref|YP_391249.1| hypothetical protein Tcr_0980 [Thiomicrospira crunogena XCL-2] gi|78363610|gb|ABB41575.1| ATP-binding cassette (ABC) superfamily transporter, permease component [Thiomicrospira crunogena XCL-2] Length = 261 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 1/255 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + L L++Q+Y+ GV +P+++ Sbjct: 6 RFLASLGESALRLFTSFGRGAIFILSLLPALPYSILRLDLLVKQVYFSGVLSLPIILTAG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L + +E + ++ LRE+G ++ A++ AGR+GSA+ AEIG M Sbjct: 66 LFVGMVLSLQGYNVLVDYNSEEAVGTMTALSLLRELGPVVAALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + E++ A+ M +D ++ + SPR A +I LP+L+++ I G IV + + Sbjct: 126 RSTEQLSALEMMAIDPLKFVFSPRFTAALIVLPMLSLMFIAMGIFGGYIVGVGWLGVDEG 185 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+++ + ++ G+IK+ A I I+++ +G+ S + + T VV S Sbjct: 186 AFWTQMNEHVDWNEDVVNGIIKSIAFAVLIAIISLFQGYDAIPTSEGVSRATTRTVVHSS 245 Query: 355 SIVIIIDSLFAIFYF 369 V+ +D + F Sbjct: 246 LGVLGLDFILTAIMF 260 >gi|282899746|ref|ZP_06307709.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] gi|281195361|gb|EFA70295.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] Length = 264 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 118/239 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I G+ + K + + Q+ VG + + +L + GAV Q A + Sbjct: 17 LVEAIFLGGQVTLHLLRGKIHRRNTLEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFI 76 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 77 NFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDP 136 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A ++ LP+LT+L+ + + G I+ Y++ VF + L +I Sbjct: 137 IDFLVIPRLLACLLMLPILTLLSLVTGMWGGLIIATNLYNLSDTVFLDSARNFLDLRDIT 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + +IKA I I+ G + +G+ TT VV ++ ++ I + + F Sbjct: 197 SAMIKAACFGILIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLVIFISNFFLSWLMFQ 255 >gi|284051975|ref|ZP_06382185.1| hypothetical protein AplaP_10931 [Arthrospira platensis str. Paraca] gi|291567910|dbj|BAI90182.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 261 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 114/236 (48%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ + K + + QM VG + + +L + G V Q A + GA Sbjct: 21 LFLGGQVLLHVLQGKIHRRNTLEQMAIVGPESLFIALLTASFVGMVFTIQVAQEFIALGA 80 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ RE+ +LT+V+IAGR SA AE+G+M++ E+IDA+ M D V L Sbjct: 81 GHLVGGVLALSLSRELTPVLTSVIIAGRVCSAFAAELGTMQVTEQIDALYMMKTDPVDYL 140 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A + LPLLTI+ + + G ++ +Y+IP +F L ++ + I Sbjct: 141 VIPRVLACSLMLPLLTIICLITGLAGGLLIATSFYNIPSVLFLDSIRDLMGLWDLISAEI 200 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 K+ AI ++ G + +G+ TT VV S+ + I+D + F + Sbjct: 201 KSVVFGWAIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSLLAIFILDFFLSWLLFKV 256 >gi|182412508|ref|YP_001817574.1| hypothetical protein Oter_0685 [Opitutus terrae PB90-1] gi|177839722|gb|ACB73974.1| protein of unknown function DUF140 [Opitutus terrae PB90-1] Length = 250 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 2/245 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + +G + + LI Q + +G + +P+V ++SF G+V+ Sbjct: 2 KQFHAIFEGIGSTVLLLVRSLSFIGTLPRQRARLIEQCFTIGYTTLPIVAILSFFIGSVL 61 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q + + GA+ + L+ + RE+G ++ A+++AGR GS+I AE+ SMK+ +E+D Sbjct: 62 ALQAGYAMQNVGAKQYIGSLVGLSMARELGPVMVAILLAGRVGSSIAAELASMKVYQEVD 121 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP--FAVFFSR 300 A+ TM + R+L+ PR+ A++ +P+L ++AN G +IV I +F+ Sbjct: 122 ALVTMNIPPERMLVLPRLIAVLFMMPVLVMIANLVGWFGGAIVAKYTTFISIDPPAYFAV 181 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ GLIKA + +V G +G VT VV S+ +++++ Sbjct: 182 LRRYTEFKDVLNGLIKAEVFGFGVVLVCCNIGLNTRGGPREIGAAVTQAVVTSLILILVL 241 Query: 361 DSLFA 365 + Sbjct: 242 NYFVT 246 >gi|262401810|ref|ZP_06078375.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC586] gi|262351782|gb|EEZ00913.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC586] Length = 263 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + G + L+RQ+Y +GV + ++++ Sbjct: 7 RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRNFPLLVRQLYSIGVQSLAIIMVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|77361458|ref|YP_341033.1| ABC transporter membrane protein [Pseudoalteromonas haloplanktis TAC125] gi|76876369|emb|CAI87591.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas haloplanktis TAC125] Length = 260 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 131/253 (51%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + K + + + LG + FK LIRQ+Y VG + ++++ Sbjct: 6 LQKIGHKTLGRFAALGRSANMLFGALVHIPNFKKGTPLLIRQLYMVGSQSLLIIVVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLALQGYTVLVGYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D ++ +I+PR WA +IS+PLL ++ + AIIGA +V + + F Sbjct: 126 TEQLSSLEMMAIDPLKRIIAPRFWAGLISMPLLALIFSAVAIIGAHLVGVDWLGVDTGSF 185 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S + +I G+IK+ A + +A+ +G+ S + K T VV S Sbjct: 186 WSIMQSQVSFQQDILNGIIKSVVFAIVVTWIALYKGYDCVPTSEGISKATTETVVHSSLA 245 Query: 357 VIIIDSLFAIFYF 369 V+ D L F Sbjct: 246 VLGFDFLLTAVMF 258 >gi|74317917|ref|YP_315657.1| hypothetical protein Tbd_1899 [Thiobacillus denitrificans ATCC 25259] gi|74057412|gb|AAZ97852.1| Protein of unknown function DUF140 [Thiobacillus denitrificans ATCC 25259] Length = 262 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 1/255 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I + +G S +R++Y+ GV + ++++ Sbjct: 4 QAIENLGARTIDAVWRIGFATRFFAATLLHSGTAFRRFGLTVRELYFTGVLSLIIILVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +G+E L+++ +RE+G ++ A++ A R+GSAI AEIG M Sbjct: 64 LFVGMVLGLQGYETLQTYGSEEALGILVALSLVRELGPVVAALLFASRAGSAITAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ A+ M +D + +++PR WA +IS+PLL L + + G +V + + Sbjct: 124 KATEQLSAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYLVGVQLIGVDEG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ S +I G+IK+ AI +A+ EG+ + + + T VV S Sbjct: 184 AFWSQMQSAVDFEQDILNGVIKSVVFGVAITAIALFEGYDAPPTAEGVSRATTRTVVTSS 243 Query: 355 SIVIIIDSLFAIFYF 369 V+ +D + F F Sbjct: 244 LAVLALDFVLTAFMF 258 >gi|260770986|ref|ZP_05879915.1| uncharacterized ABC transporter permease component YrbE [Vibrio furnissii CIP 102972] gi|260614223|gb|EEX39413.1| uncharacterized ABC transporter permease component YrbE [Vibrio furnissii CIP 102972] gi|315179032|gb|ADT85946.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio furnissii NCTC 11218] Length = 263 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I S G A + L LI+Q+Y VGV + ++++ Sbjct: 7 RWISGVGRRVLSICESFGRASLMLFGALAGRPRPIQNLPLLIKQLYSVGVQSLAIIVVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR+WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSAMQASVELGEDIGNSVIKCVAFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|332172346|gb|AEE21600.1| protein of unknown function DUF140 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 259 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 128/257 (49%), Gaps = 1/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + ++ G + + I+Q+Y VGV + ++++ Sbjct: 2 QWLASIGRNTIDTVGAFGRAFLMLLGAVIAKPQLIKNTPLTIKQIYVVGVQSLLIIVVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR+WA IIS+P+L I+ + I+G +V + + Sbjct: 122 KATEQLSSLEMMAVDPLRRIVAPRLWAGIISMPMLAIIFSAVGILGGHVVGVDWLGVDAG 181 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S S+ ++ G+IK A I +A+ +G+ S + K T VV S Sbjct: 182 SYWSIMQSSVDWNEDVVNGIIKTFVFAFVITWIAIFKGYDAIPTSEGISKATTETVVFSS 241 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ +D + F I Sbjct: 242 LAVLGLDFILTALMFGI 258 >gi|262170539|ref|ZP_06038217.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus MB-451] gi|261891615|gb|EEY37601.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus MB-451] Length = 263 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + +G + L+RQ+Y +GV + ++++ Sbjct: 7 RWVSSIGQRTLAVSETIGRASLMLFGALVGRPQPIRNFPLLVRQLYSIGVQSLAIIMVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|121727423|ref|ZP_01680551.1| conserved hypothetical protein [Vibrio cholerae V52] gi|229507423|ref|ZP_04396928.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae BX 330286] gi|229509652|ref|ZP_04399133.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae B33] gi|229516777|ref|ZP_04406223.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC9] gi|229606930|ref|YP_002877578.1| ABC transporter permease [Vibrio cholerae MJ-1236] gi|254851063|ref|ZP_05240413.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744503|ref|ZP_05418455.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholera CIRS 101] gi|262154673|ref|ZP_06028799.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae INDRE 91/1] gi|262167549|ref|ZP_06035254.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC27] gi|262191035|ref|ZP_06049244.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae CT 5369-93] gi|297581366|ref|ZP_06943289.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500651|ref|ZP_07010455.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121630195|gb|EAX62595.1| conserved hypothetical protein [Vibrio cholerae V52] gi|229345840|gb|EEO10812.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC9] gi|229353126|gb|EEO18065.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae B33] gi|229354928|gb|EEO19849.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae BX 330286] gi|229369585|gb|ACQ60008.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae MJ-1236] gi|254846768|gb|EET25182.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738028|gb|EET93421.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholera CIRS 101] gi|262024002|gb|EEY42698.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae RC27] gi|262030513|gb|EEY49151.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae INDRE 91/1] gi|262033098|gb|EEY51627.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae CT 5369-93] gi|297534204|gb|EFH73042.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540820|gb|EFH76877.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327485006|gb|AEA79413.1| Uncharacterized ABC transporter, permease component YrbE [Vibrio cholerae LMA3894-4] Length = 263 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + G + L+RQ+Y +GV + ++I+ Sbjct: 7 RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|229527546|ref|ZP_04416938.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae 12129(1)] gi|229335178|gb|EEO00663.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae 12129(1)] Length = 263 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + G + L+RQ+Y +GV + ++I+ Sbjct: 7 RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAEI ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDYGAEISLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|188532480|ref|YP_001906277.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia tasmaniensis Et1/99] gi|188027522|emb|CAO95369.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia tasmaniensis Et1/99] Length = 260 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G +F+ L++Q+Y +GV + +V++ Sbjct: 4 QALASLGRQGINFCASFGRAGLMLFHALFGIPRFRKHAPLLVKQLYSIGVLSLLIVVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLKTYSAETSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + L +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDLRTDIINCTIKSAVFALTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|229513445|ref|ZP_04402909.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TMA 21] gi|229524502|ref|ZP_04413907.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae bv. albensis VL426] gi|261211081|ref|ZP_05925370.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC341] gi|229338083|gb|EEO03100.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae bv. albensis VL426] gi|229349322|gb|EEO14278.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TMA 21] gi|260839582|gb|EEX66193.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. RC341] Length = 263 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + G + L+RQ+Y +GV + ++I+ Sbjct: 7 RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPVRHFPLLVRQLYSIGVQSLAIIIVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|189500799|ref|YP_001960269.1| hypothetical protein Cphamn1_1871 [Chlorobium phaeobacteroides BS1] gi|189496240|gb|ACE04788.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides BS1] Length = 264 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 115/243 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + K + + + Q G +P+V++ S GA++A Sbjct: 17 MKEFFLTMQDFFLFSLRAFITIPKIRRYWRDFLDQAKIAGADSLPIVLVSSIAIGALLAV 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ ++ +RE+G L+ +M++ R GS AE+G+MKI+E+IDA+ Sbjct: 77 EVGNLLEDFGAKTMLGRSTALSVIRELGPLIMGLMLSARYGSRNGAELGAMKISEQIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A +I LT +A+FS + A+++ Y+ I +F++ Sbjct: 137 RAFGTDPVAKLVMPRLVAALIMFIPLTAIADFSGLYSAALLAEHYHKIDPGIFWNAVFPR 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G +KAP A I +V+ GF + +G+ +V S ++++ + Sbjct: 197 LVFKDFVVGFLKAPVFAIIITLVSCFNGFIAQGGTAGVGRSTIKGIVVSSGLILVANFYV 256 Query: 365 AIF 367 + Sbjct: 257 SKL 259 >gi|28871581|ref|NP_794200.1| hypothetical protein PSPTO_4446 [Pseudomonas syringae pv. tomato str. DC3000] gi|28854833|gb|AAO57895.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 265 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L++Q+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLVKQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALSAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTKTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|51246140|ref|YP_066024.1| toluene ABC-transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50877177|emb|CAG37017.1| related to toluene ABC-transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 262 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 7/259 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 K+ + + + + LG ++ + ++ ++++G + VVIL F Sbjct: 5 KVEEIGSWAIDRVTNLGRFCLFLLTGIGQIFQKPFQIFRIVENIWFIGTKSMAVVILTGF 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+A QG + L++FG+ +++ +RE+G +LTA+MI R+GSA+ AEIG+M+ Sbjct: 65 FTGMVLALQGYYALAKFGSAGMLGSAVALTLIRELGPVLTAIMITARAGSAMAAEIGTMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+E++DA++TM ++ V+ + SPR+ A II PLLT + + I G + + + Sbjct: 125 ISEQLDALQTMDINPVKFVFSPRLIASIICFPLLTSIFDVVGIFGGLFIAT-TLKVNGYI 183 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTCV 350 + R H + + +I +G+IK+ A + +G+ G S ++ T V Sbjct: 184 YMYRVHESVVMEDIRSGIIKSLVFAVVVVSTCCFKGYYAHIQKEGGFGSRAVSLATTNAV 243 Query: 351 VQSISIVIIIDSLFAIFYF 369 V S +++I D L Sbjct: 244 VSSSVLILIYDYLITYILL 262 >gi|187734672|ref|YP_001876784.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC BAA-835] gi|187424724|gb|ACD04003.1| protein of unknown function DUF140 [Akkermansia muciniphila ATCC BAA-835] Length = 266 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 69/249 (27%), Positives = 125/249 (50%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG + + + + + + L+ Q+ +GV PVVI+ TGAV Sbjct: 10 GRAALRLVDRLGSIGLLLYQVASCMWSGQFRMRVLVEQIAKIGVQSQPVVIITGAFTGAV 69 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + Q FQL E ++++ RE+G ++T +M+AGR GSA+ AEIG+MK+ E++ Sbjct: 70 LEAQTLFQLQTVRMETMGGAVVAVGMFRELGPVITGLMLAGRVGSAMAAEIGTMKVTEQV 129 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+++M +D V L+ PRI A++IS+P+L + A I A IV +++ A + Sbjct: 130 DALKSMNVDPVDYLVKPRIQAMLISMPILMMEAVLVGIASAYIVSVTAFNVDQAYWMHFM 189 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T+ +I L+KA I ++ +EG + +GK +V + ++I + Sbjct: 190 SKFVTMGDIIVALVKALAFGLIISTISCREGLNTTNGAVGVGKSTMQAMVYASVALLIAN 249 Query: 362 SLFAIFYFA 370 + + + Sbjct: 250 FILTMILNS 258 >gi|238019665|ref|ZP_04600091.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748] gi|237863706|gb|EEP64996.1| hypothetical protein VEIDISOL_01539 [Veillonella dispar ATCC 17748] Length = 242 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 2/244 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G L + +QM ++GV +P++ L GAV+ Q Sbjct: 1 MNGLSQMGSATLLVWHTIRQLK--MINLWHVFQQMAHLGVDSLPIISLTLLFAGAVMTLQ 58 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 L +GA+ LM++ RE+G +L V++AGR G+AI AEIG+MK+ E+IDA+R Sbjct: 59 ITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGAAITAEIGTMKVTEQIDALR 118 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 M +D + L+ PR+ A +I +P+L I G V + + + + Sbjct: 119 VMAVDPIGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATAIKGLAPSTYLDSIQMFS 178 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 T+++ GL+K+ I +V +G + + ++G T+ VV SI +V +++ + Sbjct: 179 TISDFTLGLVKSSVFGAVIALVGSYKGMETKMGAEAVGFSTTSSVVTSIILVFVLNYFLS 238 Query: 366 IFYF 369 + Sbjct: 239 TLLY 242 >gi|308051140|ref|YP_003914706.1| hypothetical protein Fbal_3434 [Ferrimonas balearica DSM 9799] gi|307633330|gb|ADN77632.1| protein of unknown function DUF140 [Ferrimonas balearica DSM 9799] Length = 260 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I + + + LG + L LI+Q+Y VGV + ++++ Sbjct: 4 ERIRRLGSGALKWVAGLGRAGLMLVGALVRRPQPGKMLPLLIKQLYQVGVLSMVIILVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILVDFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V ++ I Sbjct: 124 KATEQLASMEMMAVDPLQRVIAPRFWAGVISMPLLALMFTTIGIWGGHLVGVEWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +I LIK+ A + +A+ +G+ + + + T VV + Sbjct: 184 AFWSILTASVEWQKDILNCLIKSVVFAFVVTWIALFKGYDAVPTAEGISRATTETVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLALDFVLTAVMFG 259 >gi|56459515|ref|YP_154796.1| ABC-type transport system involved in resistance to organic solvents, permease [Idiomarina loihiensis L2TR] gi|56178525|gb|AAV81247.1| ABC-type transport system involved in resistance to organic solvents, permease component [Idiomarina loihiensis L2TR] Length = 259 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I +G ++ + I+QMY VGV + +VI+ Sbjct: 3 QFIRSVGRQVLDSLAGIGYALAMLMGAIIGKPQPAKSWPLFIKQMYVVGVLSMLIVIVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +GAE ++++ LRE+G ++T ++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLGLQGYTILVDYGAEQSLGPMVALSLLRELGPVVTGLLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA ++S+PLL ++ + I G +V + + Sbjct: 123 KATEQLSSLEMMAVDPLRRVIAPRFWAGVVSMPLLALMFSAVGIYGGYLVGSGWLGVDEG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ G+IK+ A + +A+ +G+ S + T+ VV + Sbjct: 183 AFWSVMQSAVDWQDDLLNGIIKSIVFAFVVTWIALYKGYRSVPTSAGISAATTSTVVTAS 242 Query: 355 SIVIIIDSLFAIFYFA 370 ++ +D + F Sbjct: 243 LAILGLDFILTAIMFG 258 >gi|88861156|ref|ZP_01135790.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas tunicata D2] gi|88816878|gb|EAR26699.1| putative transport protein (ABC superfamily, membrane) [Pseudoalteromonas tunicata D2] Length = 259 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 76/251 (30%), Positives = 133/251 (52%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ ++ +G + S F+ LI+Q+Y VG + ++++ G Sbjct: 8 LGKETLNRFASVGRALMMLIGAIFSVPNFRKGTPLLIKQLYMVGFLSLMIIVVSGLFIGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+A QG L +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 68 VLALQGYTVLVDYGAEDSLGPLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D ++ +I+PR WA IIS+PLL ++ + AI+GA +V + I F+S Sbjct: 128 LSSLEMMAIDPLKRIIAPRFWAGIISMPLLALIFSAVAILGAHLVGVDWLGIDSGSFWSV 187 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + +I G+IK+ A + +A+ +G+ S + K T VVQS V+ Sbjct: 188 MQAQVSFEKDILNGMIKSLVFAFVVTWIALYKGYFCIPTSEGISKATTETVVQSSLAVLG 247 Query: 360 IDSLFAIFYFA 370 D + F+ Sbjct: 248 FDFVLTAVMFS 258 >gi|209694101|ref|YP_002262029.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238] gi|208008052|emb|CAQ78191.1| toluene tolerance protein Ttg2B [Aliivibrio salmonicida LFI1238] Length = 264 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S +G + + L++Q+Y VGV + ++++ Sbjct: 10 VENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMFPLLLQQLYSVGVLSLVIIVVSGLF 69 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G VI+ QG L +GAE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 70 IGMVISLQGYVILVDYGAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKT 129 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR+WA +IS+PLL ++ I G IV ++ I F Sbjct: 130 TEQLSSMEMMAIDPLRRIIAPRLWAGVISMPLLAMIFMAVGIWGGQIVGVEWKGIDHGSF 189 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ + +I LIK A + +A+ G+ S + T VV S Sbjct: 190 WSVMQASVDVRHDIVNSLIKCVVFAFVVTWIALFNGYDATPTSEGISLATTRTVVHSSLA 249 Query: 357 VIIIDSLFAIFYFA 370 V+ ID + F Sbjct: 250 VLGIDFVLTALMFG 263 >gi|120555619|ref|YP_959970.1| hypothetical protein Maqu_2708 [Marinobacter aquaeolei VT8] gi|120325468|gb|ABM19783.1| protein of unknown function DUF140 [Marinobacter aquaeolei VT8] Length = 260 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 123/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +I + G A + L++Q+Y VGV + +V++ Sbjct: 4 RIAGLGRLGIAIIASFGRSGQFLFGVLAGVPRPATGFPLLVKQLYAVGVLSLAIVVVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 64 FIGMVLGLQGYTILSDYGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +++PR+WA +++P+L ++ + I G +V ++ + Sbjct: 124 ATEQLSSMEMMGVDPLRRVVAPRLWAGFLAMPVLAMIFSVVGIWGGMLVGVEWLGVFEGS 183 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ S+ ++ G IK+ +A+ +G+ S + T VV S Sbjct: 184 FWGNMQSSVDFVDDVLNGFIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 243 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 AVLGLDFVLTAVMFG 258 >gi|22124065|ref|NP_667488.1| hypothetical protein y0145 [Yersinia pestis KIM 10] gi|45443560|ref|NP_995099.1| hypothetical protein YP_3829 [Yersinia pestis biovar Microtus str. 91001] gi|51597810|ref|YP_072001.1| ABC transporter, permease subunit, toluene tolerance protein [Yersinia pseudotuberculosis IP 32953] gi|108809720|ref|YP_653636.1| hypothetical protein YPA_3729 [Yersinia pestis Antiqua] gi|108813616|ref|YP_649383.1| hypothetical protein YPN_3456 [Yersinia pestis Nepal516] gi|145597639|ref|YP_001161715.1| hypothetical protein YPDSF_0323 [Yersinia pestis Pestoides F] gi|153950379|ref|YP_001399442.1| ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|153997349|ref|ZP_02022449.1| putative membrane protein [Yersinia pestis CA88-4125] gi|162419182|ref|YP_001605691.1| hypothetical protein YpAngola_A1145 [Yersinia pestis Angola] gi|165928109|ref|ZP_02223941.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. F1991016] gi|165937439|ref|ZP_02226002.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. IP275] gi|166011407|ref|ZP_02232305.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. E1979001] gi|166212216|ref|ZP_02238251.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. B42003004] gi|167400680|ref|ZP_02306189.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420726|ref|ZP_02312479.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426982|ref|ZP_02318735.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470182|ref|ZP_02334886.1| putative ABC transporter, permease protein YrbE [Yersinia pestis FV-1] gi|170022764|ref|YP_001719269.1| hypothetical protein YPK_0513 [Yersinia pseudotuberculosis YPIII] gi|186897002|ref|YP_001874114.1| hypothetical protein YPTS_3704 [Yersinia pseudotuberculosis PB1/+] gi|218930586|ref|YP_002348461.1| hypothetical protein YPO3574 [Yersinia pestis CO92] gi|229836870|ref|ZP_04457035.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229839230|ref|ZP_04459389.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899795|ref|ZP_04514936.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229904110|ref|ZP_04519221.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270488545|ref|ZP_06205619.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294505304|ref|YP_003569366.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003] gi|21956812|gb|AAM83739.1|AE013614_13 hypothetical protein y0145 [Yersinia pestis KIM 10] gi|45438429|gb|AAS63976.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51591092|emb|CAH22756.1| ABC transporter, permease subunit, toluene tolerance protein [Yersinia pseudotuberculosis IP 32953] gi|108777264|gb|ABG19783.1| membrane protein [Yersinia pestis Nepal516] gi|108781633|gb|ABG15691.1| putative membrane protein [Yersinia pestis Antiqua] gi|115349197|emb|CAL22162.1| putative membrane protein [Yersinia pestis CO92] gi|145209335|gb|ABP38742.1| membrane protein [Yersinia pestis Pestoides F] gi|149288986|gb|EDM39066.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152961874|gb|ABS49335.1| putative ABC transporter, permease protein YrbE [Yersinia pseudotuberculosis IP 31758] gi|162351997|gb|ABX85945.1| putative ABC transporter, permease protein YrbE [Yersinia pestis Angola] gi|165914544|gb|EDR33158.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. IP275] gi|165919883|gb|EDR37184.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. F1991016] gi|165989791|gb|EDR42092.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. E1979001] gi|166206962|gb|EDR51442.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. B42003004] gi|166961532|gb|EDR57553.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050048|gb|EDR61456.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054022|gb|EDR63850.1| putative ABC transporter, permease protein YrbE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749298|gb|ACA66816.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis YPIII] gi|186700028|gb|ACC90657.1| protein of unknown function DUF140 [Yersinia pseudotuberculosis PB1/+] gi|229678228|gb|EEO74333.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229687287|gb|EEO79362.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229695596|gb|EEO85643.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705813|gb|EEO91822.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262363367|gb|ACY60088.1| hypothetical protein YPD4_3184 [Yersinia pestis D106004] gi|262367255|gb|ACY63812.1| hypothetical protein YPD8_3142 [Yersinia pestis D182038] gi|270337049|gb|EFA47826.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294355763|gb|ADE66104.1| hypothetical protein YPZ3_3195 [Yersinia pestis Z176003] gi|320017116|gb|ADW00688.1| putative toluene transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 260 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + G + + LI+Q+Y VGV + ++++ Sbjct: 4 KSLASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLIKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFALTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|149278644|ref|ZP_01884780.1| ABC transporter, permease [Pedobacter sp. BAL39] gi|149230639|gb|EDM36022.1| ABC transporter, permease [Pedobacter sp. BAL39] Length = 244 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL- 190 G I K ++ ++ +QM ++GV + ++ +IS GAV+ Q AFQL Sbjct: 6 FGRYILLLKAVFRKPEKASIYMKAIFKQMDFIGVGSLGLIAIISTFIGAVMTLQIAFQLV 65 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S F + + + E+ ++A+++AG+ GSAI +EIG+M+++E+IDA+ MG++ Sbjct: 66 SDFIPKTIIGSVNRDSSILELSPTISAIVLAGKIGSAISSEIGTMRVSEQIDALEIMGIN 125 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I A I +PLL I++ F +I G I + A + + I Sbjct: 126 SPGYLILPKIIAGITMVPLLVIMSMFLSITGGYIGGTLSGAVSAAEYVQGITTDFNPYTI 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+KA I V EGF V + + + T VV S ++ D + Sbjct: 186 VVALVKAFVFGFIITSVPAYEGFYVKGGALEVAQASTRAVVVSCITILACDYIVTQLLL 244 >gi|15642515|ref|NP_232148.1| hypothetical protein VC2519 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591413|ref|ZP_01678693.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|147675288|ref|YP_001218017.1| hypothetical protein VC0395_A2101 [Vibrio cholerae O395] gi|153215706|ref|ZP_01950087.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153801107|ref|ZP_01955693.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818001|ref|ZP_01970668.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153822409|ref|ZP_01975076.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153825790|ref|ZP_01978457.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|153829794|ref|ZP_01982461.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227082638|ref|YP_002811189.1| hypothetical protein VCM66_2441 [Vibrio cholerae M66-2] gi|254225914|ref|ZP_04919516.1| conserved hypothetical protein [Vibrio cholerae V51] gi|254291437|ref|ZP_04962229.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|9657102|gb|AAF95661.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546729|gb|EAX56904.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|124114624|gb|EAY33444.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124123340|gb|EAY42083.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|125621540|gb|EAZ49872.1| conserved hypothetical protein [Vibrio cholerae V51] gi|126511436|gb|EAZ74030.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520052|gb|EAZ77275.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146317171|gb|ABQ21710.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148874712|gb|EDL72847.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|149740513|gb|EDM54628.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150422627|gb|EDN14582.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227010526|gb|ACP06738.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227014409|gb|ACP10619.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 258 Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + G + L+RQ+Y +GV + ++I+ Sbjct: 2 RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 122 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 181 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 182 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 241 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 242 LAVLGLDFVLTALMFG 257 >gi|330958007|gb|EGH58267.1| hypothetical protein PMA4326_05446 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 265 Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L++Q+Y VGV + ++++ Sbjct: 9 RVALLGRSAIDIVAVLGRSGLFLVHALLGRGGAGSSFQLLVKQLYSVGVMSLVIIVVSGI 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILAKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA ISLP+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISLPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCDPTSEGISRATTKTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|229521585|ref|ZP_04411003.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TM 11079-80] gi|229341179|gb|EEO06183.1| uncharacterized ABC transporter permease component YrbE [Vibrio cholerae TM 11079-80] Length = 263 Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + G + L+RQ+Y +GV + ++I+ Sbjct: 7 RWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ + G +V + I Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGVWGGQLVGVDWKGIDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|261250143|ref|ZP_05942719.1| uncharacterized ABC transporter permease component YrbE [Vibrio orientalis CIP 102891] gi|260939259|gb|EEX95245.1| uncharacterized ABC transporter permease component YrbE [Vibrio orientalis CIP 102891] Length = 262 Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 1/261 (0%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 + S + G AS + L LI+Q+Y VGV + + Sbjct: 1 MAGFANFVASVGQRSMAICESFGRASLMLFGAIASRPQPIKNLPLLIKQLYSVGVQSLII 60 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++L G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ A Sbjct: 61 IVLSGLFIGMVLSLQGYVILVDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALTA 120 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ ++ M +D ++ +I+PR WA +IS+P+L ++ I G +V + Sbjct: 121 EIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPMLAMIFMAVGIWGGQLVGVDWK 180 Query: 291 DIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 I F+S ++ L +I +IK+ A + +A+ G+ S + + T Sbjct: 181 GIDHGSFWSAMQASVELGQDIGNSMIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRT 240 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 VVHSSLAVLGLDFVLTALMFG 261 >gi|89075259|ref|ZP_01161686.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34] gi|89048940|gb|EAR54508.1| hypothetical protein SKA34_22619 [Photobacterium sp. SKA34] Length = 260 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + +G S + + LI+Q+Y VGV + ++I+ Sbjct: 5 AIAHLGRSGIEKCQTMGRATLMLFGALVSKPQPRKMFPLLIKQLYSVGVLSIAIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYLVLAGFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + + GA +V + I + Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQVVGVDWKGIDYGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ + +I +IKA A + +A+ G+ S + + T VV S Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVAFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTALMFG 259 >gi|258622787|ref|ZP_05717805.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258625813|ref|ZP_05720692.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262166549|ref|ZP_06034286.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus VM223] gi|258582051|gb|EEW06921.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258584975|gb|EEW09706.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|262026265|gb|EEY44933.1| uncharacterized ABC transporter permease component YrbE [Vibrio mimicus VM223] Length = 258 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + + G + L+RQ+Y +GV + ++++ Sbjct: 2 RWVSSIGQRTLAVSETFGRASLMLFGALVGRPQPIRNFPLLVRQLYSIGVQSLAIIMVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + I Sbjct: 122 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 181 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L +I IK A + +A+ G+ S + + T VV S Sbjct: 182 SFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 241 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 242 LAVLGLDFVLTALMFG 257 >gi|34540774|ref|NP_905253.1| hypothetical protein PG1033 [Porphyromonas gingivalis W83] gi|34397088|gb|AAQ66152.1| conserved hypothetical protein [Porphyromonas gingivalis W83] Length = 248 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 1/234 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +++ LI+++ +GV V +VI+ISF GAVI Q + Sbjct: 6 LQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLSL 65 Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 ++ F + L E + +++AG+ GS+I +E+G+M++ E+IDA+ M Sbjct: 66 NMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVM 125 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I ++ +P+L+I++ + I+G + ++P + F + Sbjct: 126 GVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSP 185 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 N+F +IK+ A I VA G+ V + +GK T VVQ +V++ D Sbjct: 186 YNVFYSIIKSVAYAFIISSVAGYYGYTVKGGALQVGKASTNAVVQCSILVLVAD 239 >gi|157373873|ref|YP_001472473.1| hypothetical protein Ssed_0734 [Shewanella sediminis HAW-EB3] gi|157316247|gb|ABV35345.1| protein of unknown function DUF140 [Shewanella sediminis HAW-EB3] Length = 260 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 2/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + LG A + KG ++Q+Y VGV + ++ + Sbjct: 7 LASLGRLTIDFVVGLGRAGVMLWGAIARKPRIKG-FPLFVKQLYVVGVQSMVLIFVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L FG E ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKS 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA ++SLPLL ++ I G +V ++ I F Sbjct: 126 TEQLSSLEMMAIDPLRQIIAPRFWAGVVSLPLLALIFTAVGIYGGHVVGVEWKGIDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I +IK+ A + +A+ G+ V + + K T VVQS Sbjct: 186 WSILQASVEWREDIVNCIIKSLVFAVVVTWIALYRGYRVIPNPEGISKATTQTVVQSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 246 VLALDFLLTAVMFG 259 >gi|311746375|ref|ZP_07720160.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1] gi|126575261|gb|EAZ79593.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1] Length = 263 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 114/222 (51%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 F + L + Q Y +GV +P++ L F+ G V Q LS+FGA Sbjct: 27 FVRRFFKEVFIPPYELKEVFHQCYRIGVESLPLISLTGFIVGIVFTNQSRPSLSEFGATS 86 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + L+SI +R +G L+TA++ AG+ GS+I AEIGSMK+ E+IDA+ + + L+ Sbjct: 87 WLPSLISIAVVRAMGPLVTALIAAGKMGSSIGAEIGSMKVTEQIDAMEVSATNPFKFLVV 146 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 R+ A +P+L + +F A++G+ + + + FF + + + +I + ++K+ Sbjct: 147 TRVLATTFMIPILVMYTDFVALMGSFLSVNANEMVSMTTFFVQVFESISFLDITSSVLKS 206 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 IGIV +G+ + +G+ + VV ++ ++ I Sbjct: 207 LLFGFTIGIVGCYKGYNSSKGTEGVGRAANSAVVMAMFLIFI 248 >gi|269960373|ref|ZP_06174747.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834984|gb|EEZ89069.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 263 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G + + LI+Q+Y VGV + ++++ Sbjct: 7 QFVASLGRRTLAICEAFGRATLMLIGALVTRPQPIKNFPLLIKQLYSVGVQSLAIIVVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I GA IV + + Sbjct: 127 KATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQIVGVDWKGVDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|259907019|ref|YP_002647375.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia pyrifoliae Ep1/96] gi|224962641|emb|CAX54096.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia pyrifoliae Ep1/96] gi|283476814|emb|CAY72652.1| UPF0393 inner membrane protein yrbE [Erwinia pyrifoliae DSM 12163] Length = 260 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + LG +F+ L++Q+Y +GV + +V++ Sbjct: 4 QALASLGRQGINFCASLGRAGLMLFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +GAE ++++ LRE+G +++A++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILKTYGAEASLGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + L +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDLQTDIINCTIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|329114428|ref|ZP_08243190.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] gi|326696504|gb|EGE48183.1| Putative ABC transporter permease protein [Acetobacter pomorum DM001] Length = 321 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 122/270 (45%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 F N L + + + + S G + + + + + Sbjct: 51 HFSRNGQSTLMDMVLDLVARLGRATLSLIRAAGALALFAASGLSHIVRPPFYGRVFLSTF 110 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 G +PVV L + +G VIA Q +Q+ A+ ++ + RE+G +L +M+ Sbjct: 111 LETGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMV 170 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR G+A+ A+IG+M++ ++IDA+ T+ + ++ L++PR+ A +I+LPLL ++A+ + Sbjct: 171 AGRVGAAMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVA 230 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 G V + + ++ ++ GL+KA I ++ G+ + Sbjct: 231 GGFTVAVVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAE 290 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G T VV + +++ D L +F+ Sbjct: 291 GVGSATTAAVVAASIMLLAFDYLLTDLFFS 320 >gi|119493784|ref|ZP_01624353.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106] gi|119452479|gb|EAW33666.1| hypothetical protein L8106_03769 [Lyngbya sp. PCC 8106] Length = 259 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 + G+ + K + + + QM VG + + ++ + G V Q + + Sbjct: 14 FVAALFLGGQVIVHLLQGKIYRRNTLEQMAAVGPESLLIALITAGFVGMVFTIQVSREFI 73 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA + ++++ RE+ +LTAV+I GR GSA AEIG+M++ E+IDA+ + D Sbjct: 74 TLGAGNLAGGVLALSLARELSPVLTAVIITGRVGSAFAAEIGTMQVTEQIDALYVLKTDP 133 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A + LPLL I+ + + G ++ Y+IP +F + TL ++ Sbjct: 134 VDYLVIPRVIACCLMLPLLNIICLMTGLAGGLLISSSLYNIPPNMFLESVQNFLTLWDLV 193 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI-FYFA 370 +G IKA I +++ G + +G+ TT VV + + I+D + + Sbjct: 194 SGEIKALIFGGTIAVISTNWGLTTTGGAKGVGQSTTTAVVTCLLSIFILDFFLSWSMFHG 253 Query: 371 IG 372 IG Sbjct: 254 IG 255 >gi|291615986|ref|YP_003518728.1| YrbE [Pantoea ananatis LMG 20103] gi|291151016|gb|ADD75600.1| YrbE [Pantoea ananatis LMG 20103] gi|327396238|dbj|BAK13660.1| inner membrane protein YrbE [Pantoea ananatis AJ13355] Length = 260 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + G F+ LI+Q+Y +GV + ++++ Sbjct: 4 KALASLGRRGIGTCASFGRAGLMLFHALVGKPAFRKHFPLLIKQLYSIGVLSLVIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ +GAE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGITGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + +++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRSDVVNCIIKSAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|254464755|ref|ZP_05078166.1| membrane protein [Rhodobacterales bacterium Y4I] gi|206685663|gb|EDZ46145.1| membrane protein [Rhodobacterales bacterium Y4I] Length = 260 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 114/254 (44%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + +G + + + ++ + +G +PVV L + Sbjct: 7 LARLGRTALAGLSAVGRAALFALGAFSHMLRPPYYPREVLNSLLNIGWLSLPVVGLTAIF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ Sbjct: 67 TGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKV 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ T+ ++ L++PR+ A +I++P+L + + I+G V + A + Sbjct: 127 TEQIDALVTLSTHPMKYLVAPRVLAALITVPVLVGIGDIIGIMGGYTVAVQNLGFNAAAY 186 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +I + L+K ++ G G + +G+ V + ++ Sbjct: 187 LKNTVDFLEPLDIISSLVKGAAFGTIAAMMGCYYGMQSGRGAQGVGRATKGSVEAAAVLI 246 Query: 358 IIIDSLFAIFYFAI 371 + + + +F++ Sbjct: 247 LAANFVLTGVFFSL 260 >gi|300718605|ref|YP_003743408.1| toluene tolerance ABC transporter, permease subunit [Erwinia billingiae Eb661] gi|299064441|emb|CAX61561.1| toluene tolerance ABC transporter, permease subunit [Erwinia billingiae Eb661] Length = 257 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + G +F+ LI+Q+Y +GV + +V++ Sbjct: 3 LRALGRQGINTCASFGRAGLMLFHALVGIPRFRKHAPLLIKQLYSIGVLSLLIVVVSGLF 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ +GA+ L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 IGMVLGLQGYLVLNTYGADSSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +ISPR WA IS+PLLT++ I+G +IV + I F Sbjct: 123 TEQLSSMEMMAVDPLRRIISPRFWAGFISMPLLTLIFVAVGIMGGAIVGVSWKGIDSGFF 182 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + + +I +IK+ A + +A+ G+ S + + T VV + Sbjct: 183 WSAMQNAVDVRTDILNCVIKSAVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHASLA 242 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 VLGLDFVLTALMFG 256 >gi|330446812|ref|ZP_08310463.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491003|dbj|GAA04960.1| mlaE [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 260 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + + +G S + L++Q+Y VGV + ++++ Sbjct: 5 AIARIGRSGIDKCQTIGRATLMLFGALVSKPQPVKMFPLLMKQLYSVGVLSMAIILVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLSLQGYIVLADFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +I+PR WA +IS+PLL ++ + + GA IV + I + Sbjct: 125 ATEQLSSMEMMAVDPLRRVIAPRFWAGVISMPLLALMFSVVGLWGAQIVGVDWKGIDYGS 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S S+ + +I +IKA A + +A+ G+ S + + T VV S Sbjct: 185 FWSVMQSSVNFSYDIGNSIIKAVVFAITVTWIAVFNGYDAVPTSEGISRATTRTVVNSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFILTALMFG 259 >gi|296122312|ref|YP_003630090.1| hypothetical protein Plim_2064 [Planctomyces limnophilus DSM 3776] gi|296014652|gb|ADG67891.1| protein of unknown function DUF140 [Planctomyces limnophilus DSM 3776] Length = 260 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 123/247 (49%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G T + L Y +G +PV+++ G V+A Sbjct: 2 LLTSVRTVGDAAIFTSTVALGLATRRSRSAILWPIFYEIGCRSMPVILITGGFIGMVLAV 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q QL+ G + ++++ ++E+G +L A M+AGR GSA+ AEIG+MK+ E+IDA+ Sbjct: 62 QSFDQLAAIGLQSRLGSVVNVSLVKELGPVLAATMLAGRVGSAMAAEIGTMKVTEQIDAL 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + +G + V L+ PR A ++ +P LT+LA+ ++ + + I +++ S Sbjct: 122 QALGANPVMFLVCPRFLACVLLIPALTLLADGIGMLSGWYLSVQVLGISSHLYWFYSDSY 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T +I +G+IK+ F AI +VA GF + +G+ T V S +V+ +D L Sbjct: 182 ITSLDIISGVIKSIFFGGAIALVACHRGFHCSSGAEGVGRAATEAFVCSFILVLAMDFLL 241 Query: 365 AIFYFAI 371 +F+ + Sbjct: 242 GVFFIQL 248 >gi|270263239|ref|ZP_06191509.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13] gi|270042927|gb|EFA16021.1| hypothetical protein SOD_d02560 [Serratia odorifera 4Rx13] Length = 260 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G + + L++QM+ VGV + ++++ Sbjct: 4 QALASLGRRGINTSASFGRAGLMLFNALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLTI+ I G SIV + I Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTIIFVAVGIWGGSIVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L+K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|253997969|ref|YP_003050032.1| hypothetical protein Msip34_0256 [Methylovorus sp. SIP3-4] gi|253984648|gb|ACT49505.1| protein of unknown function DUF140 [Methylovorus sp. SIP3-4] Length = 263 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 8/265 (3%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N + +G +I+ + S A + +GE + IR++Y+ Sbjct: 2 LNRLAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFT 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR Sbjct: 55 GVMSLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+AI AEIG MK E++ A+ M + + +++PR WA ++S+PLL L + ++G Sbjct: 115 AGTAITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ ++ +I G+IK+ A ++A+ EGF + + Sbjct: 175 LVAVPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVNSSLAVLGLDFILTSF 259 >gi|114766131|ref|ZP_01445135.1| membrane protein [Pelagibaca bermudensis HTCC2601] gi|114541591|gb|EAU44633.1| membrane protein [Roseovarius sp. HTCC2601] Length = 260 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 107/250 (42%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + +G V + + + + + +G +PVV L + TG Sbjct: 11 GRAALGLLAAIGRVALFACAAISHVVRPPVYGREFLNALLQIGWLSLPVVGLTAVFTGGA 70 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+I Sbjct: 71 LALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 130 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ ++ L+ PR+ A +I +PLL + + I G V A + Sbjct: 131 DALVTLSTHPMKYLVVPRLLAALIVVPLLVAVGDVIGIFGGYFVATGSLGFNPAAYLENT 190 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +I + L+K ++ G G + +G+ V + +++ + Sbjct: 191 VDFLEPLDIVSSLVKGCAFGGIAALMGCFYGMQSGRGAQGVGRATKGSVEAAAVLILAAN 250 Query: 362 SLFAIFYFAI 371 L +F+I Sbjct: 251 FLLTGVFFSI 260 >gi|254362425|ref|ZP_04978534.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261494094|ref|ZP_05990597.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496065|ref|ZP_05992475.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094014|gb|EDN74930.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|261308315|gb|EEY09608.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310260|gb|EEY11460.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 258 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 125/253 (49%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG +F+ LI+Q+Y +GV + +++L Sbjct: 5 ISSIGAVVINFIRTLGRSAFMLWGALIGKPEFRKHTPLLIKQLYVLGVQSLLIIMLSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L + I G S+V + + F Sbjct: 125 TEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAIFTAIGIWGGSLVGVDWKGVDGGSF 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +S ++ +++ G IK+ A A+ +A+ G+ S + + T VV + ++ Sbjct: 185 WSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFNGYDCVPTSEGISQATTRTVVNASLVI 244 Query: 358 IIIDSLFAIFYFA 370 + +D + F Sbjct: 245 LGLDFILTAIMFG 257 >gi|224069577|ref|XP_002303003.1| ABC transporter family protein [Populus trichocarpa] gi|222844729|gb|EEE82276.1| ABC transporter family protein [Populus trichocarpa] Length = 258 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 112/236 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V+ G+ S K + ++Q+ VG V V +L S G Q + ++ G Sbjct: 16 VLVLAGQVIIRSLMGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLG 75 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ID +R +G D V Sbjct: 76 LNRSIGGVLALAFSRELSPVVTSIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGADPVDY 135 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A ++LP LT++ + + ++ Y I + +I + + Sbjct: 136 LVIPRVIASCLALPFLTLMCFTVGMASSGLLADSVYGISLNIILDSAQRALNSWDIISAM 195 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I IV+ G + +G+ T+ VV S+ + + D + +F Sbjct: 196 IKSGVFGAIISIVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFMADFALSYCFFQ 251 >gi|227112741|ref|ZP_03826397.1| hypothetical protein PcarbP_07254 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 260 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|227326638|ref|ZP_03830662.1| hypothetical protein PcarcW_04664 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 260 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISTSASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|253686687|ref|YP_003015877.1| hypothetical protein PC1_0282 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753265|gb|ACT11341.1| protein of unknown function DUF140 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 260 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISTSAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|53803964|ref|YP_114401.1| hypothetical protein MCA1968 [Methylococcus capsulatus str. Bath] gi|53757725|gb|AAU92016.1| conserved hypothetical protein TIGR00056 [Methylococcus capsulatus str. Bath] Length = 263 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + LG L LI QMY VGV + ++++ G Sbjct: 11 LGQSALVGIRKLGRAHLFILHVLTGLPGLVARLDLLIVQMYSVGVLSILLIMISGLFVGM 70 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG + LS FGAE +++ +RE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 71 VLGLQGYYVLSDFGAEESLGVMVAASLVRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 130 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + + M +D V+ +I+PR +A ++S+PLL L + ++G V + F S+ Sbjct: 131 LSGMEMMAVDPVKRIIAPRYFAGVVSMPLLAALFSIIGVLGGYFVGVGLLGVDEGAFRSQ 190 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + +I G IK+ + +A+ EG+ S + + T VV S V+ Sbjct: 191 MQAKIDFDEDIVNGFIKSLVFGAVVTWIAVFEGYDATPTSEGVSRATTRSVVYSAFAVLG 250 Query: 360 IDSLFAIFYFA 370 D + F Sbjct: 251 CDFVLTALMFG 261 >gi|107024236|ref|YP_622563.1| hypothetical protein Bcen_2692 [Burkholderia cenocepacia AU 1054] gi|116688439|ref|YP_834062.1| hypothetical protein Bcen2424_0415 [Burkholderia cenocepacia HI2424] gi|206558708|ref|YP_002229468.1| hypothetical protein BCAL0302 [Burkholderia cenocepacia J2315] gi|105894425|gb|ABF77590.1| protein of unknown function DUF140 [Burkholderia cenocepacia AU 1054] gi|116646528|gb|ABK07169.1| protein of unknown function DUF140 [Burkholderia cenocepacia HI2424] gi|198034745|emb|CAR50612.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 255 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|307824571|ref|ZP_07654796.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] gi|307734555|gb|EFO05407.1| protein of unknown function DUF140 [Methylobacter tundripaludum SV96] Length = 260 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 5/258 (1%) Query: 118 IVKFINDSC----SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +++F+ + LG + + L+ QM+ +GV ++ + Sbjct: 1 MIEFLQQLGIKTRTSFTKLGRGTFFLLQTMSGVLSVLPRPRLLLNQMHSIGVLSFLIITI 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 G V+ QG + LS FGAE +++ +RE+G +++A++ AGR+GSA+ AEIG Sbjct: 61 SGLFVGMVLGLQGYYTLSDFGAEESLGVMVAASLVRELGPVVSALLFAGRAGSALTAEIG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK E++ + M +D ++ +ISPR A +S+PLL L + IIG +V + Sbjct: 121 LMKATEQLSGMEMMAVDPIKRIISPRFLAGFLSMPLLAALFSAVGIIGGQLVGSGLLGVD 180 Query: 294 FAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 ++S+ + +I G+IK+ +A+ EG+ S + + T VV Sbjct: 181 EGAYWSQMQAKLDFQDDIINGVIKSIVFGFVASWIALFEGYDAIPTSEGVSRATTRTVVN 240 Query: 353 SISIVIIIDSLFAIFYFA 370 S ++ +D + F Sbjct: 241 SAFSILGLDFILTTLMFG 258 >gi|225024503|ref|ZP_03713695.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC 23834] gi|224942654|gb|EEG23863.1| hypothetical protein EIKCOROL_01378 [Eikenella corrodens ATCC 23834] Length = 258 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 1/250 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + LG A S L IRQ+Y+ GV + ++ + G Sbjct: 7 LGAKTLDFLQELGKTTLFLFAVLARSGTLLPRLQLGIRQIYFTGVLSIVIIAVSGLFVGM 66 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG QL++F + +++ LRE+G +L ++ A +G A+ +EIG MK E+ Sbjct: 67 VLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAGILFASSAGGAMTSEIGLMKTTEQ 126 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 ++A++ M +D V ++ PR WA +IS+PLL + N + I GA ++ +Y + +F+S+ Sbjct: 127 LEAMKVMAVDPVARVVVPRFWAGVISMPLLASICNVAGIYGAYLIGVRYLGLDGGIFWSQ 186 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + ++ GLIK+ AI ++A+ +GF + + T VV S V+ Sbjct: 187 MQANIDVGYDVVNGLIKSVVFGVAISLIAVYQGFHCRSTPEGILRASTRTVVSSALTVLA 246 Query: 360 IDSLFAIFYF 369 +D + F Sbjct: 247 LDFVLTAIMF 256 >gi|54310335|ref|YP_131355.1| hypothetical protein PBPRA3247 [Photobacterium profundum SS9] gi|46914776|emb|CAG21553.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 260 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G S + K L++Q+Y VGV + ++++ Sbjct: 6 IASVGRQGIEKFQTIGRATLLLYGALVSKPQPKKMFPLLMKQLYSVGVLSIAIIMVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYIVLVDFGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+PLL+++ + I G +V + I + F Sbjct: 126 TEQLSSMEMMAVDPLRQVIAPRFWAGVISMPLLSMMFSAVGIWGGQLVGVDWKGIDYGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ L +I LIK+ A I +A+ G+ S + T VV + Sbjct: 186 WSVMQASVELGEDIGNSLIKSVVFAITITWIAVFNGYDAVPTSEGISLATTRTVVNASLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTALMFG 259 >gi|256424262|ref|YP_003124915.1| hypothetical protein Cpin_5283 [Chitinophaga pinensis DSM 2588] gi|256039170|gb|ACU62714.1| protein of unknown function DUF140 [Chitinophaga pinensis DSM 2588] Length = 264 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F D + +G ++K + +IRQ Y VG + ++ + Sbjct: 15 KGIDGFFKDIFNIVLFIG-------RIFKEAFKRPVEIREVIRQCYQVGYKSLALITMTG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F+TG V +Q LS+FGA + L++I +R + L+TA++ AG+ GS+I AE+ SM Sbjct: 68 FITGLVFTKQSRPSLSEFGATSWLPSLIAIAVIRALAPLVTALICAGKVGSSIGAELASM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 ++ E+IDA+ ++ + L++ R+ A IS+P+L ++G+ + I F Sbjct: 128 RVTEQIDAMEVSAINPFKFLVTTRVMATTISIPILVGYTGLVGLLGSFLDIHLNEQTSFT 187 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 FF + T +KA IG+V+ +G+ + +GK VV S+ Sbjct: 188 SFFQEAFKNIYFLDFITTGVKAVVFGFTIGVVSCYQGYHATQGTQGVGKAANISVVISMF 247 Query: 356 IVII 359 ++ I Sbjct: 248 LIFI 251 >gi|326527561|dbj|BAK08055.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 341 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 111/238 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 94 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 153 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G + Sbjct: 154 LHRSVGGVLALALARELTPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGSQPIDY 213 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 214 LVVPRVLACVLALPVLTLISFALGLASSAFLADAVFGVSTSIILESARKALRPWDLISAL 273 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 IK+ I +V+ G + +G+ T+ VV S+ + I D + +F G Sbjct: 274 IKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVISLVGIFIADFALSCLFFQAG 331 >gi|163803754|ref|ZP_02197611.1| putative ABC superfamily transport protein [Vibrio sp. AND4] gi|159172438|gb|EDP57307.1| putative ABC superfamily transport protein [Vibrio sp. AND4] Length = 263 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L LI+Q+Y VGV + ++I+ Sbjct: 7 QFVASLGRRTLDICEAFGRATLMLIGALVTRPQPIKNLPFLIKQLYSVGVQSLAIIIVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYIVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA +V + + + Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDYG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|50119256|ref|YP_048423.1| hypothetical protein ECA0296 [Pectobacterium atrosepticum SCRI1043] gi|49609782|emb|CAG73216.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 260 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++I+ Sbjct: 4 RTLASLGRQGISASASFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIIVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|297537487|ref|YP_003673256.1| hypothetical protein M301_0292 [Methylotenera sp. 301] gi|297256834|gb|ADI28679.1| protein of unknown function DUF140 [Methylotenera sp. 301] Length = 268 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 1/264 (0%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N I K + + + LG S + +R++Y GV + Sbjct: 5 NPLVSIIKTLQGIGHRMVERIWRLGAGARLFFLTIVYSGESFKRFHLTMREIYSTGVMSL 64 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++I+ +F G V+A QG L ++G+ L+S+ +RE+G ++TA++ AGR+G+AI Sbjct: 65 LIIIVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVSLSLVRELGPVVTALLFAGRAGTAI 124 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M ++ + +++PR WA +IS+P+L L + I+G IV Sbjct: 125 TAEIGLMKTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILATLFSMVGILGGYIVAVP 184 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ ++ ++I G+IK+ A ++A+ EGF + + + T Sbjct: 185 LIGVDEGAFWSQMQASVDFQSDIVNGIIKSLVFGVACTMIALFEGFDAPPTAEGVSRATT 244 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV S V+ +D + F I Sbjct: 245 RTVVISSLTVLGLDFVLTSFMLVI 268 >gi|261819643|ref|YP_003257749.1| hypothetical protein Pecwa_0289 [Pectobacterium wasabiae WPP163] gi|261603656|gb|ACX86142.1| protein of unknown function DUF140 [Pectobacterium wasabiae WPP163] Length = 260 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S + G +F+ L++Q+Y VGV + ++++ Sbjct: 4 RTLASLGRQGISASAAFGRAGLMLFNALVGKPEFRKQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGLISMPLLAVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVDWRQDVLNCVIKSIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|330815311|ref|YP_004359016.1| ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327367704|gb|AEA59060.1| ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 255 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ +V + + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVVGGLERTGYASRLFVRLVLECFALLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++GAE L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +++PR+WA II++PLL+ + ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVVAPRMWAGIITMPLLSAIFCAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVDVWSDVGNGVLKSVVFGFAVTFTALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|29840386|ref|NP_829492.1| ABC transporter, permease protein, putative [Chlamydophila caviae GPIC] gi|29834735|gb|AAP05370.1| ABC transporter, permease protein, putative [Chlamydophila caviae GPIC] Length = 263 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 117/253 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + C LG + T S K S+ Q Y +GV+ +PVV+L VTG Sbjct: 10 RIFRVLCLFPLELGRWMGFTCAVIKSCSWKKSLFRSVSLQGYDIGVASLPVVMLTGAVTG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 70 IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A II++P L I A +S I ++ + +P V+ Sbjct: 130 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWSGIFCGYLLCRYAFQLPAQVYLH 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L++I ++K+ I +A +G + K T VV S ++ Sbjct: 190 MVSGNVLLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 249 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 250 ANCVITSFFHVLG 262 >gi|254411230|ref|ZP_05025007.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196181731|gb|EDX76718.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 261 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 70/246 (28%), Positives = 118/246 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 L I G+ K + + + QM VG + + ++ + GAV Sbjct: 9 LGLWLQRLLAAILLGGQVIVHLLGGKIYRRNTLEQMAVVGPDSLTIALITATFIGAVFTI 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q + FGA ++++ RE+ +LTAV+IAGR GSA AEIG+M++ E+IDA+ Sbjct: 69 QVTREFINFGATTAIGGVLALALSRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQIDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + D + L+ PR+ A I+ LPLLTIL+ + G ++ Y+IP +VF + Sbjct: 129 YMLKTDPIDYLVIPRVIACILMLPLLTILSIILGMTGGVLIAVNLYNIPQSVFLDSARNF 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++FT +IKA I ++ G + +G+ TT VV ++ + I + Sbjct: 189 LGIWDLFTAMIKAAVFGMLIAVIGCSWGLTTSGGAKGVGQSTTTAVVTALLAIFITNFFL 248 Query: 365 AIFYFA 370 + F Sbjct: 249 SWLMFQ 254 >gi|78355070|ref|YP_386519.1| transporter [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217475|gb|ABB36824.1| transporter, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 250 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 125/217 (57%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + Q+ G + +V +I+ TG ++A Q A QL + GA + +++S+ ++E+G LL Sbjct: 34 MWHQLAETGTRSLGIVSVIAACTGMILALQAAQQLEKVGALSYVANMVSVTIVKELGPLL 93 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+++AGRSG+A AEI +M+I EEIDA+ +G+ VR L+ P++ A++I LP+LT+ A+ Sbjct: 94 TAIILAGRSGAAFCAEISTMQIYEEIDALEVIGISPVRYLVVPKLCAMLIMLPVLTLWAD 153 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 II + + F+ + ++ ++ + ++KA AI ++ +GF Sbjct: 154 LVGIISGGLFAALGLGLSFSGYLNQAVYFLGTGDVVSSVVKAAGFGTAITLICCWQGFMA 213 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +G++ T VVQSI +VI++D F + G Sbjct: 214 QGGAADVGRRTTKAVVQSIFMVILLDLFFTAINYLAG 250 >gi|82703861|ref|YP_413427.1| hypothetical protein Nmul_A2748 [Nitrosospira multiformis ATCC 25196] gi|82411926|gb|ABB76035.1| Protein of unknown function DUF140 [Nitrosospira multiformis ATCC 25196] Length = 265 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 2/258 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + LG S +IR++Y+ GV + ++++ Sbjct: 8 GIQSVGHRVIDSIWRLGYASRFFLLTLIKSGTSLRRFTLVIRELYFTGVQSLIIILVSGL 67 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L ++GAE ++++ LRE+G +++A++ A R+GSAI AEIG MK Sbjct: 68 FVGMVLGLQGFETLQRYGAESAVGTMVALSLLRELGPVVSALLFASRAGSAITAEIGLMK 127 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ A+ M +D + +++PR WA +IS+PLL L + I G +V + Sbjct: 128 ATEQLAAMEMMAVDPIARVVAPRFWAGVISMPLLAALFSAIGIYGGYLVAVVLIGVDEGS 187 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ S ++ G+IK A+ +A+ EG+ + + T VV S Sbjct: 188 FWSQMQSAVDFRYDVVNGIIKTCVFGIAVTAIAVFEGYDAAPTAEGVSGATTRTVVTSSL 247 Query: 356 IVIIIDSLFAIF-YFAIG 372 ++ +D + F + +G Sbjct: 248 AILGLDFILTSFMFRGMG 265 >gi|113461315|ref|YP_719384.1| ABC transporter permease [Haemophilus somnus 129PT] gi|112823358|gb|ABI25447.1| permease component, possible ABC transporter [Haemophilus somnus 129PT] Length = 261 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 1/258 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I LG + + LI+Q+Y +GV + +++L Sbjct: 3 RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA +IS+P+L ++ I G S++ + + Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLIGVDWKGVDAG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ + + ++ G IK+ A A+ +A+ G+ S + K T VV + Sbjct: 183 SFWSVMQNSVSWSYDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242 Query: 355 SIVIIIDSLFAIFYFAIG 372 +V+ +D + F G Sbjct: 243 LVVLGLDFVLTALMFGAG 260 >gi|240948315|ref|ZP_04752701.1| permease [Actinobacillus minor NM305] gi|240297354|gb|EER47895.1| permease [Actinobacillus minor NM305] Length = 258 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 125/249 (50%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G +F+ LI+Q+Y VGV + +++L G V Sbjct: 9 GKTTIDIIRAFGRSAFMLWGALIGKPQFRKHSPLLIKQLYVVGVQSLLIIMLSGLFIGMV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ Sbjct: 69 LGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQL 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V + + F+S Sbjct: 129 SSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWSVM 188 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ + +++ G IK+ A A+ +A+ G+ S + + T VV + +++ +D Sbjct: 189 QNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQATTKTVVNASLVILGLD 248 Query: 362 SLFAIFYFA 370 + F Sbjct: 249 FILTAIMFG 257 >gi|33594617|ref|NP_882261.1| hypothetical protein BP3758 [Bordetella pertussis Tohama I] gi|33564693|emb|CAE44015.1| putative membrane protein [Bordetella pertussis Tohama I] Length = 261 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G + I LG +++ +G + +Q++++G + + Sbjct: 7 LNGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ A Sbjct: 60 IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ A+ M +D +R ++ PR W II++P+L + + I+G IV Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179 Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F+S+ + L ++ G+IK+ + +VA+ EG+ +G+ T Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV V+ +D + F Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260 >gi|15602040|ref|NP_245112.1| hypothetical protein PM0175 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720395|gb|AAK02259.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 261 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I + + + S +G +++ LI+Q++ +GV + +++L Sbjct: 3 QFISELGHHAISSCRAIGRAGFMLFGALIGKPQWRKHTPLLIKQLHVLGVQSLLIIMLSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA +I++P+L I+ I G S+V + + Sbjct: 123 KATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAIIFTAIGIWGGSLVGVDWKGVDAG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + T ++ G IK+ A A+ +A+ G+ S + K T VV + Sbjct: 183 SFWSVMQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHAS 242 Query: 355 SIVIIIDSLFAIFYFA 370 +V+ +D + F Sbjct: 243 LVVLGLDFVLTALMFG 258 >gi|300777429|ref|ZP_07087287.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] gi|300502939|gb|EFK34079.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] Length = 253 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 120/248 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S G + T + ++ + L+ Q Y +G + ++ + F+ G V+ Sbjct: 4 IRSFLQETGNIAQFTKNYFLLGFRPPYEIKELLAQCYLIGYKSLGLISMTGFIIGLVLTM 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L ++G E ++ I +REI ++ A++ AG+ S+I AE+GSM++ E+IDA+ Sbjct: 64 QLRPSLVRYGVESQLPVMVGIAIIREIAPVIAALIFAGKIASSIGAELGSMRVTEQIDAM 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 G + L++ R+ A LP+L ILA+ ++ GA I + ++F+S+ + Sbjct: 124 EVSGTHPFKYLVATRVLATTFMLPVLIILADAISLYGAWIGVNIGGTTSLSLFYSQVFDS 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++I IK+ F A+GIV +G+ + +G + VV S ++ ++D + Sbjct: 184 LDFSDIIPAFIKSFFFGFAVGIVGAYKGYNAVKGTRGVGNAANSAVVLSSILIFVLDLIA 243 Query: 365 AIFYFAIG 372 +G Sbjct: 244 VQITGILG 251 >gi|126728696|ref|ZP_01744511.1| membrane protein [Sagittula stellata E-37] gi|126710626|gb|EBA09677.1| membrane protein [Sagittula stellata E-37] Length = 260 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 109/251 (43%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 +G V + + + + M VG +PVV L +F TGA Sbjct: 10 LGRALLHWLAAIGRVTRFGLTALSHTLRPPFYAGEFGAAMMNVGWLSLPVVGLTAFFTGA 69 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+ Sbjct: 70 ALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQ 129 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ T+ + ++ L++PR+ A ++ +P L + + + G V A + Sbjct: 130 IDALTTLSTNPMKYLVAPRLLAALLVVPALVGIGDVIGVFGGYAVATGSLGFNPAAYLKN 189 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ + L+K ++ G G + +G+ V + +++ Sbjct: 190 TVDFLEPLDVISSLVKGCAFGGIAALMGCYFGMMSGRGAQGVGRATKGSVEAAAVLILAA 249 Query: 361 DSLFAIFYFAI 371 + L +F++ Sbjct: 250 NFLLTGAFFSL 260 >gi|116310403|emb|CAH67412.1| OSIGBa0143N19.6 [Oryza sativa Indica Group] Length = 345 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 99 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA A++G+M+++E+ D +R +G V Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAKLGTMQVSEQTDTLRVLGAQPVDY 218 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334 >gi|157372592|ref|YP_001480581.1| hypothetical protein Spro_4359 [Serratia proteamaculans 568] gi|157324356|gb|ABV43453.1| protein of unknown function DUF140 [Serratia proteamaculans 568] Length = 260 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G + + L++QM+ VGV + ++++ Sbjct: 4 QALASLGRRGINTSASFGRAGLMLWGALVGRPEPRKQWPLLLKQMHSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT++ I G SIV + I Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISMPLLTLIFVAIGIWGGSIVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L+K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|270159893|ref|ZP_06188549.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968] gi|289165353|ref|YP_003455491.1| toluene transporter subunit: membrane component of ABC superfamily [Legionella longbeachae NSW150] gi|269988232|gb|EEZ94487.1| toluene tolerance protein Ttg2B [Legionella longbeachae D-4968] gi|288858526|emb|CBJ12407.1| toluene transporter subunit: membrane component of ABC superfamily [Legionella longbeachae NSW150] Length = 260 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 1/253 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I + + LG + Q+Y+VGV ++I+ + Sbjct: 3 EFITRIGSRGSRILQDLGSSGIFLFLMLFRKPDISKLWSLVRYQIYFVGVLSCLIIIVSA 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L +FGA L+++ RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVVGLQGYNTLQKFGASSQLGQLLALSISRELGPVISALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ MG+D + +I PR A I+LPLL ++ + A+ G + + + Sbjct: 123 KATEQLSSMDMMGVDPLGRVIYPRFLAGFIALPLLALIFSAVAVFGGYFIGVHWLGVDAG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +G+IK+ A + +++ +GF + + + T VV S Sbjct: 183 SFWSNMQAAVDFRIDVLSGIIKSLVFAFVVTWISVFQGFECVPTAEGISQATTKTVVYSS 242 Query: 355 SIVIIIDSLFAIF 367 V+ +D L Sbjct: 243 LAVLGLDFLLTAM 255 >gi|238793703|ref|ZP_04637325.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909] gi|238726944|gb|EEQ18476.1| hypothetical protein yinte0001_800 [Yersinia intermedia ATCC 29909] Length = 260 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|126668782|ref|ZP_01739730.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter sp. ELB17] gi|126626765|gb|EAZ97414.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter sp. ELB17] Length = 259 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + ++ G K L L++Q+Y VGV + +V++ Sbjct: 3 AIARLGKNTLDFLASFGRASQFLLGVLVGVPKPSVGLPLLLKQIYSVGVLSLVIVVVSGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS FG+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLGLQGYTILSDFGSESAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +I+PR+WA +S+P+L ++ + I+G +V ++ + Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFLSMPILALVFSMVGILGGMLVGVEWLGVFEGS 182 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ ++ ++ G+IK+ +A+ +G+ S + T VV S Sbjct: 183 FWGNMQASVDFRDDVLNGVIKSVVFGFVCAWIAVYQGYDCVPTSAGISSATTKTVVYSSL 242 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 AVLGLDFILTAVMFG 257 >gi|125549278|gb|EAY95100.1| hypothetical protein OsI_16916 [Oryza sativa Indica Group] Length = 345 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 99 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVSLLTAAFVGMAFTIQFVREFTRLG 158 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 159 LHRSVGGVLALALSRELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAQPVDY 218 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 219 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 278 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 279 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 334 >gi|78064990|ref|YP_367759.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965735|gb|ABB07115.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383] Length = 255 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERTGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|83647976|ref|YP_436411.1| organis solvents resistance ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83636019|gb|ABC31986.1| ABC-type transport system involved in resistance to organic solvents, permease component [Hahella chejuensis KCTC 2396] Length = 259 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 127/254 (50%), Gaps = 2/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + LG + + KG L++Q+Y VGV + ++++ Sbjct: 5 LQRLGRNGLLSLGALGRAGIFLVGSLLGAPRMKG-FPLLLKQLYSVGVLSLVIIVVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 64 IGMVLGLQGYNILVDYGSEQAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMKA 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ MG+D +R +I+PR+ A I++P+L ++ + + G +V ++ + F Sbjct: 124 TEQLSSLEMMGVDPLRQIIAPRLLAGFIAMPMLAMIFSVVGVWGGKMVGVEWLGVYEGSF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ + +I G+IK+ +A+ +G+ S + T VV S Sbjct: 184 WSNMQASVDFSDDILNGIIKSIVFGVVCTWIAVFQGYDSVPTSEGISSATTKTVVYSSLA 243 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 VLGLDFILTAVMFG 257 >gi|225164012|ref|ZP_03726299.1| ABC-type transport system involved in resistance to organic solvents, permease component [Opitutaceae bacterium TAV2] gi|224801394|gb|EEG19703.1| ABC-type transport system involved in resistance to organic solvents, permease component [Opitutaceae bacterium TAV2] Length = 258 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 5/256 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + N + LG + TG+ S+ + + R +Y G+ VPV++++ Sbjct: 2 LRTLGNHTLLTIQELGDLAQFTGKAFTSAIGSRKLSRRIFRAIYEQGIRCVPVILIVGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG V+ QG L++FGA L+S+ +RE+G +LTA+M+ G++GSA+ AE+G + Sbjct: 62 TGLVLGLQGYHVLNRFGASGMLGTLVSLTLVRELGPVLTALMLVGQAGSALAAELGIQRN 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E+IDA+ TMG D LISPR+ A +I P+ T + G + + V+ Sbjct: 122 SEQIDALETMGADAHAYLISPRLIAALIVYPIHTAFFCLIGMFGGYLSGSVVLPLEPGVY 181 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV-----HSNSLGKKVTTCVVQ 352 +S + ++ +KA + GF + ++G T VV Sbjct: 182 WSSIDAAVQGGDVRECFLKAAIFGLLTIAICAHNGFNAHRRRSVTGARAVGASTTRAVVI 241 Query: 353 SISIVIIIDSLFAIFY 368 S V+ D + F Sbjct: 242 SCITVLAADYVITSFL 257 >gi|149378023|ref|ZP_01895747.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter algicola DG893] gi|149357678|gb|EDM46176.1| ABC-type transport system involved in resistance to organic solvents, permease component [Marinobacter algicola DG893] Length = 259 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ F S LG A + L++Q+Y VGV + ++++ Sbjct: 3 RLAAFGRLGMSVIASLGRSGRFLVGALAGVPRPSVGFPLLLKQLYSVGVLSLAIIVVSGL 62 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG LS +G+E ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 63 FIGMVLGLQGYTILSDYGSEAAIGQMIALTLVRELGPVVTALLFAGRAGSALTAEIGLMK 122 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ MG+D +R +I+PR+WA IS+P+L + + I G +V ++ + Sbjct: 123 ATEQLSSMEMMGVDPLRRVIAPRLWAGFISVPVLAAVFSVVGIWGGMLVGVEWLGVFEGS 182 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+ S+ + ++ G++K+ +A+ +G+ S + T VV S Sbjct: 183 FWGNMQSSVSFTADVLNGVVKSLVFGFVCTWIAVYQGYDCVPTSAGISAATTKTVVYSSL 242 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 AVLGLDFVLTAVMFG 257 >gi|238785100|ref|ZP_04629095.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970] gi|238796191|ref|ZP_04639701.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC 43969] gi|238713992|gb|EEQ06009.1| hypothetical protein yberc0001_210 [Yersinia bercovieri ATCC 43970] gi|238719884|gb|EEQ11690.1| hypothetical protein ymoll0001_34470 [Yersinia mollaretii ATCC 43969] Length = 260 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|197287459|ref|YP_002153331.1| hypothetical protein PMI3656 [Proteus mirabilis HI4320] gi|194684946|emb|CAR47136.1| putative membrane protein [Proteus mirabilis HI4320] Length = 259 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S S G +F+ L++Q+Y VGV + ++++ Sbjct: 5 LARLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+I ++ M +D +R +++PR WA IS+PLL+++ I G +IV + I F Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ ++ IK+ A + +A+ G+ S + + T VV S Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 VLGLDFVLTALMFG 258 >gi|186477517|ref|YP_001858987.1| hypothetical protein Bphy_2769 [Burkholderia phymatum STM815] gi|184193976|gb|ACC71941.1| protein of unknown function DUF140 [Burkholderia phymatum STM815] Length = 255 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + A + ++ + +Q+++VG + Sbjct: 1 MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++++++PR+WA II++P+L + + +IG IV Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAVGVIGGYIVGVLM 173 Query: 290 YDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|156975891|ref|YP_001446798.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116] gi|156527485|gb|ABU72571.1| hypothetical protein VIBHAR_03657 [Vibrio harveyi ATCC BAA-1116] Length = 263 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G + + L LI+Q+Y VGV + ++++ Sbjct: 7 QFVASLGRRTLAICEAFGRATLMLVGALVTRPQPIKNLPLLIKQLYSVGVQSLAIIVVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA +V + + Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 187 SFWAAMQSSVELGQDIGNSMIKCIVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|223937293|ref|ZP_03629199.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894078|gb|EEF60533.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 244 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 2/236 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G ++ S Q + +G + + +V ++SF G VIA L Sbjct: 5 IGELMLLFWRTVRSLPLVWRQRQKTFDQFFEIGNASLLMVCILSFFIGGVIALLTGPVLV 64 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G L+ I +E+ ++ +++IAGR GS++ AEIGSM++ +EIDA+RTM ++ Sbjct: 65 ERGLTNSVGGLVGISMAKELAPVMMSILIAGRIGSSMTAEIGSMRVYQEIDALRTMNINP 124 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI--PFAVFFSRFHSTATLAN 309 + L+ PR+ A+ ++LPLL I + G ++V + I F FF+ + Sbjct: 125 IHYLVLPRLTAIAVALPLLVIFSILVGWGGGALVSALNHKIAVSFQAFFTNLREVVDFGD 184 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + GL+K+ A IG+V +G +G+ VT VV I +++I+D Sbjct: 185 VINGLVKSFIFALVIGVVCCHQGLQTIGGPRGIGRSVTKAVVNCIVLIVILDYFLT 240 >gi|268590740|ref|ZP_06124961.1| toluene tolerance ABC efflux transporter, permease [Providencia rettgeri DSM 1131] gi|291313512|gb|EFE53965.1| toluene tolerance ABC efflux transporter, permease [Providencia rettgeri DSM 1131] Length = 260 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F G +F+ L++Q+Y +GV + ++ + Sbjct: 4 KAIAAFGRRWIDIFSAFGRAGYMLFRALLGKPEFRKQWPLLMKQLYAIGVQSLLIIAVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ I+G ++V + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ ++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWASMQSSVDWRLDLVNCVIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LSVLGLDFVLTALMFG 259 >gi|312888834|ref|ZP_07748397.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311298709|gb|EFQ75815.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 267 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 62/231 (26%), Positives = 113/231 (48%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 F + +++Q Y VGV + ++ + F+ G + +Q LS+FGA Sbjct: 33 FVLRFFKEVFFPPYEFKEILKQCYDVGVKSLLLISVTGFIVGVIFTKQSRPSLSEFGATS 92 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + L+SI LR + L+TA++ AG+ GS+I AE+GSM++ E+IDA+ G + L+ Sbjct: 93 WLPSLVSIAILRALASLVTALIAAGKVGSSIGAELGSMRVTEQIDAMEVSGTKPFKYLVC 152 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 R+ A I++PLL F A++G + + + + F + T + ++ L K+ Sbjct: 153 TRVLATTITIPLLASYTAFIALLGGYLNVSQNEGTSYTTFMEQVFEPLTFIDFWSTLAKS 212 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 IGIV +G+ + +GK VV ++ +V I + + + Sbjct: 213 IMFGFTIGIVGCYQGYNSSRGTEGVGKAANAAVVTAMFLVFIEEVIIVQIF 263 >gi|293394224|ref|ZP_06638524.1| toluene tolerance ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291423202|gb|EFE96431.1| toluene tolerance ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 260 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + F + + G + + L++Q++ VGV + ++++ Sbjct: 4 QALASFGRRGINTSAAFGRAGLMLWGALVGRPEPRRQWPLLVKQLHSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R + +PR WA +IS+PLLTI+ I G S+V + I Sbjct: 124 KATEQISSLEMMAVDPLRRIAAPRFWAGLISMPLLTIIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRQDLLNCLIKSVVFAITVTWIAIFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|170731749|ref|YP_001763696.1| hypothetical protein Bcenmc03_0394 [Burkholderia cenocepacia MC0-3] gi|254246538|ref|ZP_04939859.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184] gi|124871314|gb|EAY63030.1| hypothetical protein BCPG_01288 [Burkholderia cenocepacia PC184] gi|169814991|gb|ACA89574.1| protein of unknown function DUF140 [Burkholderia cenocepacia MC0-3] Length = 255 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|257465526|ref|ZP_05629897.1| permease [Actinobacillus minor 202] gi|257451186|gb|EEV25229.1| permease [Actinobacillus minor 202] Length = 260 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 125/249 (50%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G +F+ LI+Q+Y VGV + +++L G V Sbjct: 9 GKTTIDIIRAFGRSAFMLWGALIGKPQFRKHSPLLIKQLYVVGVQSLLIIMLSGLFIGMV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ Sbjct: 69 LGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQL 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V + + F+S Sbjct: 129 SSLEMMAVDPLRRIIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWSVM 188 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ + +++ G IK+ A A+ +A+ G+ S + + T VV + +++ +D Sbjct: 189 QNSVSASDLINGFIKSIIFAFAVVWIALFNGYDSTATSEGISQATTKTVVNASLVILGLD 248 Query: 362 SLFAIFYFA 370 + F Sbjct: 249 FILTAIMFG 257 >gi|28899437|ref|NP_799042.1| ABC transporter [Vibrio parahaemolyticus RIMD 2210633] gi|153839285|ref|ZP_01991952.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810] gi|260363394|ref|ZP_05776246.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260879329|ref|ZP_05891684.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260895712|ref|ZP_05904208.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260900285|ref|ZP_05908680.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28807673|dbj|BAC60926.1| putative ABC superfamily transport protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747186|gb|EDM58174.1| toluene tolerance protein Ttg2B [Vibrio parahaemolyticus AQ3810] gi|308087410|gb|EFO37105.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308093131|gb|EFO42826.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308107579|gb|EFO45119.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308111178|gb|EFO48718.1| organic solvent ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|328471426|gb|EGF42321.1| ABC transporter [Vibrio parahaemolyticus 10329] Length = 263 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 1/262 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + + + + + G S + LI+Q+Y VGV + Sbjct: 1 MVASFIQFVASLGRRTLAICEAFGRATLMLVGAIFSKPQPSKSFPLLIKQLYSVGVQSLA 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++++ G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 61 IIVVSGLFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALT 120 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA +V + Sbjct: 121 AEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDW 180 Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F++ S+ L +I +IK A + +A+ G+ S + + T Sbjct: 181 KGVDHGSFWAAMQSSVELGQDIGNSMIKCFVFAITVTWIALFNGYDAIPTSEGISRATTR 240 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262 >gi|123443934|ref|YP_001007905.1| hypothetical protein YE3751 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090895|emb|CAL13777.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 260 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|332163079|ref|YP_004299656.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667309|gb|ADZ43953.1| hypothetical protein YE105_C3459 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862752|emb|CBX72894.1| UPF0393 inner membrane protein yrbE [Yersinia enterocolitica W22703] Length = 260 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAVTVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|238764271|ref|ZP_04625223.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC 33638] gi|238697552|gb|EEP90317.1| hypothetical protein ykris0001_25370 [Yersinia kristensenii ATCC 33638] Length = 260 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCVSFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|220905696|ref|YP_002481007.1| hypothetical protein Cyan7425_0250 [Cyanothece sp. PCC 7425] gi|219862307|gb|ACL42646.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425] Length = 248 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 1/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + + + QM VG + V ++ + G V Q A + F Sbjct: 3 AAFLLGGQVFVHLLMGRINRRNTLEQMSVVGPESLLVALITATFVGMVFTIQVAREFINF 62 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA +++I RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D V Sbjct: 63 GAVSAVGGVLAIALTRELAPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALYLLSTDPVD 122 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR A + LP+LT+LA +A+ G ++ Y IPF++F S L +I++ Sbjct: 123 YLVLPRFLACCLMLPVLTLLALVTAMGGGMLLAESLYGIPFSLFLDSAKSFLELWDIWSA 182 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 ++K+ + I+ G + +G+ T VV S+ + I D + + + G Sbjct: 183 VLKSIVFGALVAIIGCNWGLTTSGGAKGVGQSTTAAVVISLLSIFIADFFLSWVMFHGTG 242 >gi|254251295|ref|ZP_04944613.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158] gi|124893904|gb|EAY67784.1| hypothetical protein BDAG_00477 [Burkholderia dolosa AUO158] Length = 386 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 131/240 (54%), Gaps = 2/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 VI + +Y G +P+ L++F+ G V++ A QL F Sbjct: 148 RVILDALSVLRRPQTMP--WKETSANVYSAGAQALPITALVAFLIGIVLSYLSAQQLQMF 205 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA + ++++ + +RE+G +L+A+++AGRSGSAI A+IG M++ EE+DA+R MG+ Sbjct: 206 GANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGL 265 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 LI PR+ AL +++PLL + N A+ G ++ I F +AN++ G Sbjct: 266 RLILPRVLALGVAMPLLVMWTNIVALTGGALAAKMVLGIDVNYFVRSLPGVVPIANLYIG 325 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 L K I +VA GF + +S SLG+ TT VV SI++VI+ D++FAI + +G+ Sbjct: 326 LGKGVVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVTSITVVILADAVFAILFQNVGL 385 >gi|149925791|ref|ZP_01914055.1| ABC-type transporter, permease component involved in toluene tolerance [Limnobacter sp. MED105] gi|149825908|gb|EDM85116.1| ABC-type transporter, permease component involved in toluene tolerance [Limnobacter sp. MED105] Length = 261 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 130/266 (48%), Gaps = 8/266 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L +G ++ I A +G + + +I Q++++G Sbjct: 3 PIALVSRLGAGVIATIAGLGVFARFVGNLFMLLPKALFRP-------RLVIDQIHFIGNY 55 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG + L+++GAE L+++ +RE+G +++A++ AGR+G+ Sbjct: 56 SLVIIVVSGLFVGFVLGLQGYYTLNRYGAEQALGLLVALSLVRELGPVVSALLFAGRAGT 115 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D +++PR A +ISLPLL L + I G +V Sbjct: 116 SLTAEIGLMKAGEQLTAMEMMAVDPKARIVAPRWIAGLISLPLLAGLFSAVGIFGGYVVG 175 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ + + +I G+IK+ A+ +A+ +G+A + + Sbjct: 176 VLLIGVDSGAFWSQMQAGVDVRDDILNGVIKSVVFGVAVSSIALFQGYACQPTPEGVSRA 235 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 T VV S ++ +D + F+I Sbjct: 236 TTRTVVISSLTILGLDFVLTALMFSI 261 >gi|42525130|ref|NP_970510.1| ABC-type organic solvent resistance transport system, permease protein [Bdellovibrio bacteriovorus HD100] gi|39577341|emb|CAE81164.1| ABC-type organic solvent resistance transport system, permease protein [Bdellovibrio bacteriovorus HD100] Length = 239 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 1/238 (0%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 +I+ E + +Q+++VG + +V+ V + +F + Sbjct: 1 MITLIAETLTGVFTPPFRRKEFFQQLHFVGNKSLFIVVFCVCFAAIVTILESSFHMKMVI 60 Query: 195 A-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 + ++L LRE+G ++TA++++ R G+ +E+GSM+I E++DA++ +G+D V Sbjct: 61 QNDSMVPGFAAVLILRELGAIVTALLLSSRVGAGYASEVGSMQITEQVDALKMLGIDPVN 120 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR A ++ ++T++AN + I A V Y +F + ++ Sbjct: 121 YLVVPRFLACVLGAMMITVVANMACIFSAMAVSQFYLGYTPGMFLTSMQRFVDFKDLIFA 180 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +IK I +VA GF + +G+ T VV S +I+ID + + + + Sbjct: 181 MIKGACFGGVIPLVACYFGFRCQQGAEGVGRATTNTVVVSSIAIIVIDFILSYTFSYL 238 >gi|33598744|ref|NP_886387.1| hypothetical protein BPP4258 [Bordetella parapertussis 12822] gi|33603818|ref|NP_891378.1| hypothetical protein BB4845 [Bordetella bronchiseptica RB50] gi|33574874|emb|CAE39537.1| putative membrane protein [Bordetella parapertussis] gi|33577943|emb|CAE35208.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 261 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 8/261 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 +G + I LG +++ +G + +Q++++G + + Sbjct: 7 LSGLGGWVRGQIGGIGYFTRFLGALLARSGIAVRRP-------GLVSQQVHFIGNYSLLI 59 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ A Sbjct: 60 IAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTA 119 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 EIG MK E++ A+ M +D +R ++ PR W II++P+L + + I+G IV Sbjct: 120 EIGLMKAGEQLSAMEVMAVDPMRRVLVPRFWGGIIAMPVLAAVFSMVGILGGWIVGVLMI 179 Query: 291 DIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + F+S+ + L ++ G+IK+ + +VA+ EG+ +G+ T Sbjct: 180 GVDAGAFWSQMQNGVDVLDDVLNGVIKSLVFGVTVTLVALYEGWQARPTPEGVGRATTRT 239 Query: 350 VVQSISIVIIIDSLFAIFYFA 370 VV V+ +D + F Sbjct: 240 VVVGSLAVLGLDFILTALMFG 260 >gi|170717850|ref|YP_001784909.1| hypothetical protein HSM_1589 [Haemophilus somnus 2336] gi|168825979|gb|ACA31350.1| protein of unknown function DUF140 [Haemophilus somnus 2336] Length = 261 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 1/258 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I LG + + LI+Q+Y +GV + +++L Sbjct: 3 RVISSLGRWGMDFCRSLGRAGFMLFGALVGKQQMRKHFPLLIKQLYVLGVQSLLIIMLSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +ISPR WA +IS+P+L ++ I G S+V + + Sbjct: 123 KATEQLSSLEMMAVDPLRRVISPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDAG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ + ++ G IK+ A A+ +A+ G+ S + K T VV + Sbjct: 183 SFWSVMQNSVSWGYDLLNGCIKSLCFAIAVVWIALFNGYDCIPTSEGISKATTKTVVHAS 242 Query: 355 SIVIIIDSLFAIFYFAIG 372 +V+ +D + F G Sbjct: 243 LVVLGLDFVLTALMFGAG 260 >gi|323343316|ref|ZP_08083543.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella oralis ATCC 33269] gi|323095135|gb|EFZ37709.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella oralis ATCC 33269] Length = 260 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 1/249 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I + G + G + + + F +++M +G+ + +V+LISF GAV Sbjct: 12 IKLTYRYLTTFGRYLILMGRSFSRPERMRMFFKQYVKEMSQLGIDSIGIVLLISFFIGAV 71 Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + + + L E + +++AG+ GS I +E+G+M++ ++ Sbjct: 72 ICIQMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 131 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I L+ +P L I ++ + I+GA + + + Sbjct: 132 IDALDIMGVNSASYLILPKIMGLVTIMPFLVIFSSLTGILGAYGTAYIGHILTPEDLTLG 191 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++ +IK+ F A I V+ G++V S +GK T VV S +++ Sbjct: 192 LQHSFNPWFVWMSIIKSLFFAFIIASVSSYFGYSVEGGSVEVGKASTDAVVSSSVLILFS 251 Query: 361 DSLFAIFYF 369 D Sbjct: 252 DVFLTQLLS 260 >gi|255037710|ref|YP_003088331.1| hypothetical protein Dfer_3962 [Dyadobacter fermentans DSM 18053] gi|254950466|gb|ACT95166.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM 18053] Length = 242 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G G K + L+ + +GVS + +V ++S GAV Q A+ Sbjct: 1 MSVIGKYFIFLGTLFGKGEKLSVYWRRLMEECVGIGVSSIFIVAIVSTFIGAVSCIQTAY 60 Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L I ++ L+ + E+ +T +++AG+ GS I +E+G+M+I E+IDA+ M Sbjct: 61 NLVSPIIPISTVALIVRDMEILELAPTITCIVLAGKVGSNIASELGTMRITEQIDALEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ L+ P++ A +++ P+L I + F I+G + I + + Sbjct: 121 GINSSSYLVLPKVVAAMLTFPMLVIFSAFLGILGGYLAGTLTGVITERDYLYGIRDSFVP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 NIF +K I ++ +GF + +GK T V S +++ D L A Sbjct: 181 YNIFFMCVKPFVFGFLIASISSFKGFFTSGGALEVGKASTQAVTNSCISILVADYLLAQL 240 Query: 368 YF 369 Sbjct: 241 LL 242 >gi|227358279|ref|ZP_03842620.1| ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] gi|227161615|gb|EEI46652.1| ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] Length = 259 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + S S G +F+ L++Q+Y VGV + ++++ Sbjct: 5 LAQLGARSLSIFATFGRAGIMLFRALIGKPEFRKQWPLLMKQLYSVGVQSLLIIMVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+I ++ M +D +R +++PR WA IS+PLL+++ I G +IV + I F Sbjct: 125 TEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIWGGAIVGVDWKGIDEGFF 184 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ ++ IK+ A + +A+ G+ S + + T VV S Sbjct: 185 WASMQGAVEWQKDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 244 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 VLGLDFVLTALMFG 258 >gi|260914439|ref|ZP_05920908.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631540|gb|EEX49722.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] Length = 260 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + LG + K L++Q++ +GV + +++L G Sbjct: 8 LGRSAIDFCRSLGRAGFMLFGALVGKPQIKKHFPLLVKQLHVLGVQSLLIIMLSGLFIGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 68 VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V + + F+S Sbjct: 128 LSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWSV 187 Query: 301 FHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + T ++ G IK+ A A+ +A+ G+ S + K T VV + +V+ Sbjct: 188 MQNAVTWEKDLLNGFIKSLCFAIAVVWIALFNGYDCLPTSEGISKATTRTVVHASLVVLG 247 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 248 LDFVLTALMFG 258 >gi|300113019|ref|YP_003759594.1| hypothetical protein Nwat_0303 [Nitrosococcus watsonii C-113] gi|299538956|gb|ADJ27273.1| protein of unknown function DUF140 [Nitrosococcus watsonii C-113] Length = 260 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + +++ LG G+ S LI Q+Y VGV +P++++ Sbjct: 3 EALLRLGRWGLGTFERLGRGHLFLGQLLLSIAALLLRFPLLITQVYSVGVLTLPIIVVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FGAE ++S+ +RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 63 AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ + M +D VR + +PR +A S+PLL + + ++G V + Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ ++ ++ G+IK+ + +A+ EG+ S+ +G+ T VV S Sbjct: 183 AFWSQMQASTDWEEDVLNGVIKSIVFGIVVTWIAVFEGYDTVPTSDGVGRATTRTVVHSA 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 FAVLALDFVLTALMFG 258 >gi|119511793|ref|ZP_01630895.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414] gi|119463566|gb|EAW44501.1| hypothetical protein N9414_16364 [Nodularia spumigena CCY9414] Length = 257 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 113/237 (47%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + G+ + K + +++ M G + V VIL+S G + Q A +L +F Sbjct: 17 AAVLLFGQVLLHLLQGKTYYRKILQHMVTAGPASVSPVILVSGFAGMIFTIQTARELVRF 76 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA ++ RE+ LLTA +IAG+ GSA AEIG+M++ E+IDA+ + + + Sbjct: 77 GALDAVGGAFALAFCRELAPLLTASIIAGQVGSAFAAEIGAMRVTEQIDALYMLKTNPID 136 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A I+ +P++ + A I G ++Y++ F S L+++F Sbjct: 137 YLVLPRVIACILMMPIMMVFALIVGISGGVFAASQFYNVDPEAFLESVRSFLQLSDLFMV 196 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+K + I G + +G+ TT VV + ++ ++D ++ F Sbjct: 197 LVKGLIFGAIVAINGCSWGLTTKGGAKEVGESATTAVVTTWVLIFMMDFFLSLLMFE 253 >gi|77166237|ref|YP_344762.1| hypothetical protein Noc_2785 [Nitrosococcus oceani ATCC 19707] gi|254435217|ref|ZP_05048724.1| conserved hypothetical protein [Nitrosococcus oceani AFC27] gi|76884551|gb|ABA59232.1| Protein of unknown function DUF140 [Nitrosococcus oceani ATCC 19707] gi|207088328|gb|EDZ65600.1| conserved hypothetical protein [Nitrosococcus oceani AFC27] Length = 260 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + +++ LG G+ S LI Q+Y VGV +P++++ Sbjct: 3 EALLRLGRWGLGTFERLGRGHLFLGQLLLSIATLLLRFPLLITQVYSVGVLTLPIIVVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FGAE ++S+ +RE+G +++A++ AGR+GSA+ AEIG M Sbjct: 63 AFVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ + M +D VR + +PR +A S+PLL + + ++G V + Sbjct: 123 KATEQLSGMEMMAVDPVRRIAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ ++ ++ G+IK+ + +A+ EG+ S+ +G+ T VV S Sbjct: 183 AFWSQMQASTDWKEDVLNGVIKSIVFGIVVTWIAVFEGYDAVPTSDGVGRATTRTVVHSA 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 FAVLALDFVLTALMFG 258 >gi|37521379|ref|NP_924756.1| hypothetical protein glr1810 [Gloeobacter violaceus PCC 7421] gi|35212376|dbj|BAC89751.1| glr1810 [Gloeobacter violaceus PCC 7421] Length = 255 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 114/233 (48%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 G+ + + + + Q+ VG V V ++ + G V Q A + FGA Sbjct: 12 LLAGQVLIHLLRGRIHWRNTVDQLSVVGTESVLVAVITAITIGMVFTIQVAREFISFGAS 71 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 +++I RE+ +LTAV+IAGR GSA AE+G+M++ E+IDA+ + D + L+ Sbjct: 72 SAIGGVLAIALTRELAPVLTAVIIAGRVGSAFAAEVGTMRVTEQIDALEVLRTDPIDYLV 131 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 +PR+ A + LP+LTI+A+ + + G + + Y I ++ + ++ +GLIK Sbjct: 132 TPRVIACAVMLPVLTIVADVTGLAGGLFITTQLYGISATLYLDSARNLLESWDMISGLIK 191 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A I ++ G + +G T VV ++ + I++ + + F Sbjct: 192 AGIFGVLIALIGTNWGLTTTGGARGVGNSTTQSVVTALLTIFIVNFILSALMF 244 >gi|238751354|ref|ZP_04612847.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380] gi|238710412|gb|EEQ02637.1| hypothetical protein yrohd0001_15400 [Yersinia rohdei ATCC 43380] Length = 260 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGIKVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G ++V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGAVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|254509100|ref|ZP_05121202.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio parahaemolyticus 16] gi|219547981|gb|EED25004.1| ABC-type transport system involved in resistance to organic solvents, permease component [Vibrio parahaemolyticus 16] Length = 263 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 1/262 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + H+ + + S G AS + L LI+Q+Y VGV + Sbjct: 1 MMAHLTDFVASTGRRALSVIASFGRASLMLFGALASRPQPIANLPLLIKQLYSVGVQSLL 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++L G V++ QG L FGAE ++++ LRE+G ++TA++ AGR+GSA+ Sbjct: 61 IIVLSGLFIGMVLSLQGYVILIDFGAEGALGQMVALSLLRELGPVVTALLFAGRAGSALT 120 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I G +V + Sbjct: 121 AEIGLMKATEQLSSMEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDW 180 Query: 290 YDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 I F++ S+ L +I +IK+ A + +A+ G+ S + + T Sbjct: 181 KGIDHGSFWAAMQSSVELGQDIGNSMIKSLAFAITVTWIALFNGYDAIPTSEGISRATTR 240 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV S V+ +D + F Sbjct: 241 TVVHSSLAVLGLDFVLTALMFG 262 >gi|284008692|emb|CBA75353.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 261 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + S + G +F LI+Q+Y VG+ + ++ + Sbjct: 7 LTALGRRSLAVVATFGRAGYLLFRALFGKPEFAKQWPLLIKQLYNVGILSLLIIAVSGLF 66 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 67 IGMVLGLQGYLVLTMFSAESSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 126 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+I ++ M +D +R +I+PR WA +IS+PLL ++ I+G ++V + I F Sbjct: 127 TEQISSLEMMAVDPLRRVIAPRFWAGLISMPLLALIFVAVGILGGALVGVDWKGIDEGFF 186 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S +I IK+ A + +A+ G+ S + + T VV S Sbjct: 187 WSSMQSAIEWKKDILNCFIKSVVFAFTVSWIALFNGYDAIPTSEGISRATTRTVVHSSLA 246 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 VLGLDFVLTALMFG 260 >gi|190150611|ref|YP_001969136.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915742|gb|ACE61994.1| hypothetical protein APP7_1342 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 276 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 124/253 (49%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G +F+ LI+Q+Y +GV + +++L Sbjct: 23 ISGIGSTVIDFIRAFGRATFMLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLF 82 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 83 IGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 142 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L + I G S+V + + F Sbjct: 143 TEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSF 202 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +S ++ +++ G IK+ A A+ +A+ G+ S + + T VV + +V Sbjct: 203 WSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVV 262 Query: 358 IIIDSLFAIFYFA 370 + +D + F Sbjct: 263 LGLDFILTAIMFG 275 >gi|318604041|emb|CBY25539.1| uncharacterized ABC transporter, permease component YrbE [Yersinia enterocolitica subsp. palearctica Y11] Length = 260 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRRGINVCASFGRAGLMLFNALVGRPEPRKQWPLLVKQLYSVGVQSLLIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQSAVEWRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|258592962|emb|CBE69271.1| toluene transporter subunit: membrane component of ABC superfamily [NC10 bacterium 'Dutch sediment'] Length = 256 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 128/256 (50%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G + Q ++G + G + ++ Q+Y++GV +++L Sbjct: 1 MGNPLEAVGRTVLKQVRMMGHMAIFLGSTGLWAVLPPLKFRRIVSQIYFIGVKSSSIILL 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 + +G V+ QG + L +FG+E + + +RE+G ++ A+M+A R+GSA AEIG Sbjct: 61 TAAFSGMVLGLQGYYTLRKFGSEALLGPAVGLSLIRELGPVMAALMVAARAGSASAAEIG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M+I E+IDA+ M ++ V+ L+ P++ A +IS+PLLT + + I G +V K + Sbjct: 121 IMRITEQIDALEAMAVNPVKHLVVPKVVAGLISVPLLTAIFDVVGIFGGYLVGVKMLGVG 180 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 +FS + +++I G +K+ + V +GF G + +GK T VV S Sbjct: 181 AGTYFSEMRNMVEMSDIQGGFLKSLSFGLIVTWVCTYKGFYTGYGAEGVGKATTEAVVLS 240 Query: 354 ISIVIIIDSLFAIFYF 369 +V++ + F Sbjct: 241 SVLVLVWNYFMTAVLF 256 >gi|319791928|ref|YP_004153568.1| hypothetical protein Varpa_1241 [Variovorax paradoxus EPS] gi|315594391|gb|ADU35457.1| protein of unknown function DUF140 [Variovorax paradoxus EPS] Length = 260 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 118/253 (46%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 S LG + + Q++++G + ++ + G Sbjct: 8 DVGFAVRSHLANLGYGAKLFMRLLGPGAQIMRRFSLVRDQIHFLGNYSLAIIGVSGLFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ Q + L ++G+ L+++ +RE+G ++ A++ GR+G+++ AEIG MK +E Sbjct: 68 FVLGLQMYYALQRYGSSEALGLLVTLSLVRELGPVVAALLFTGRAGTSLTAEIGLMKADE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M +D V+ +++PR WA +I++PLL + + I+G +V + F+ Sbjct: 128 QLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLGVDPGAFWG 187 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + ++ G+IK+ + +A+ +G++ + + T VV + V+ Sbjct: 188 QMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQGYSAQPTPEGVSRATTRTVVTASLAVL 247 Query: 359 IIDSLFAIFYFAI 371 +D L F+I Sbjct: 248 GLDFLLTAMMFSI 260 >gi|145588286|ref|YP_001154883.1| hypothetical protein Pnuc_0097 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046692|gb|ABP33319.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 265 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 5/259 (1%) Query: 117 KIVKFINDSCSQ----AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 KI+ D LGL S +I Q+ +VG ++ Sbjct: 6 KILDLFGDLGFFIRRNLTSLGLAARMFTAVIWRSGFLLKRPRLVIDQILFVGNHSFVIIA 65 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+++ AEI Sbjct: 66 VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAGTSLTAEI 125 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G MK E++ A+ M +D + +I+PR+WA IIS+P+L + ++G +V + Sbjct: 126 GLMKAGEQLSAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGVLGGYLVGVPLIGV 185 Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ ++I GLIK+ A+ +A+ +G+ + + T VV Sbjct: 186 DSGAFWSQMQGGVDLFSDIGNGLIKSLVFGVAVTFIALYQGYEAKPTPEGVSQATTRTVV 245 Query: 352 QSISIVIIIDSLFAIFYFA 370 S V+ +D L F+ Sbjct: 246 ISSLSVLALDFLLTAMMFS 264 >gi|92114341|ref|YP_574269.1| hypothetical protein Csal_2219 [Chromohalobacter salexigens DSM 3043] gi|91797431|gb|ABE59570.1| protein of unknown function DUF140 [Chromohalobacter salexigens DSM 3043] Length = 260 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 132/259 (50%), Gaps = 3/259 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 IV + LG + + A + +RQM+++GV + +V++ Sbjct: 3 HHIVALGRGTLETVSALGRAVIFLVQA-AWGVPSREGWHLWLRQMHFIGVMSLAIVLVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FGAE ++++ LRE+ ++ A++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVLGLQGFTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D +R +++PR+WA +S+PLLT+ + I G +V ++ + Sbjct: 122 KATEQLTSMEMIGVDPLRRIVAPRLWAGFVSMPLLTVGFSVVGIWGGYLVGVQWLGVFDG 181 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S S+ +I G++K+ + +A+ +G+ + S + + T VV S Sbjct: 182 SYWSNMQSSVAFVDDILNGMLKSVVFGLVVTWIAVFQGYDLVPTSEGISRATTRTVVYSS 241 Query: 355 SIVIIIDSLF-AIFYFAIG 372 V+ +D + A+ + +G Sbjct: 242 LAVLGLDFVLTALMFGELG 260 >gi|152978463|ref|YP_001344092.1| hypothetical protein Asuc_0787 [Actinobacillus succinogenes 130Z] gi|150840186|gb|ABR74157.1| protein of unknown function DUF140 [Actinobacillus succinogenes 130Z] Length = 259 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 127/255 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F LG + +F+ LI+Q++ +GV + ++++ Sbjct: 4 KLISGFGATVIKSVQALGRSGFMLFGALVGTPQFRKHTPLLIKQLHVLGVQSLLIILMSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 FFIGMVLGLQGYVVLVDFAAEANVGQLVALALLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA +I++P+L +L +IG S++ + I Sbjct: 124 KATEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAVLFTAVGVIGGSLIGVDWKGIDGG 183 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ G IK+ A + VA+ G+ S + + T VV S Sbjct: 184 SFWSVMQNAVASKDLLYGFIKSVVFAFTVVWVALFNGYDCVPTSEGISQATTKTVVHSSL 243 Query: 356 IVIIIDSLFAIFYFA 370 +V+ +D + F Sbjct: 244 LVLGLDFVLTAIMFG 258 >gi|315633782|ref|ZP_07889072.1| toluene efflux ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315477824|gb|EFU68566.1| toluene efflux ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 261 Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + + LG + + I+Q++ +GV + +++L G Sbjct: 9 FGRHAINFGRALGRAGFLLFGALIGKPQVRKHFPLFIKQLHVLGVQSLLIIMLSGLFIGM 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 69 VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D +R +I+PR WA II++P+L+I+ I G S+V + + F+S Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVGVDWKGVDAGSFWSV 188 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 S+ T + +I G IK+ F A A+ +A+ G+ S + K T VV + +V+ Sbjct: 189 MQSSVTWSHDILNGTIKSVFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLVVLG 248 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 249 LDFVLTAIMFG 259 >gi|260910011|ref|ZP_05916695.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635870|gb|EEX53876.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella sp. oral taxon 472 str. F0295] Length = 248 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + LG + G + + + F +++M +GV V +V+LISF GAVI Sbjct: 3 ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P++ L+ +P L I ++ I+GA + + + Sbjct: 123 LDIMGVNSASYLILPKVLGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ ++K+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 183 SFNPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242 Query: 364 FAIFYF 369 Sbjct: 243 LTQMLS 248 >gi|187479775|ref|YP_787800.1| membrane protein [Bordetella avium 197N] gi|115424362|emb|CAJ50915.1| putative membrane protein [Bordetella avium 197N] Length = 262 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 ++ IG + I G +++ +G + +Q++++ Sbjct: 1 MSALGRFITAIGAWVGDLIRSVGFFTRFFGAILARSGIIFRRP-------RLVSQQVHFI 53 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR Sbjct: 54 GNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGR 113 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+++ AEIG MK E++ A+ M +D +R ++ PR W +I++P+L + + I+G Sbjct: 114 AGTSLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRFWGGVIAMPILASVFSMVGILGGW 173 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ + + ++ G+IK+ + +VA+ EG+ + Sbjct: 174 VVGVVMIGVDTGAFWSQMQAGVDIWDDVLNGVIKSVVFGITVTLVALYEGWQARPTPEGV 233 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV V+ +D L F Sbjct: 234 ARATTRTVVVGSLAVLALDFLLTALMFG 261 >gi|237749420|ref|ZP_04579900.1| ABC transport system permease [Oxalobacter formigenes OXCC13] gi|229380782|gb|EEO30873.1| ABC transport system permease [Oxalobacter formigenes OXCC13] Length = 258 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 121/254 (47%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +G + + + Q++++G + ++ + Sbjct: 5 VSNLGYKTRKLIDNIGYATRIFATMFKALPQILKRPRLITDQIFFIGNKSLLIICVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L ++G+E ++++ RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 65 VGFVLGLQGYYILIRYGSEQALGVMVALSLTRELGPVVTALLYAGRAGTSLTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M ++ V +++PR WA IIS+PLL L + + +IG IV + F Sbjct: 125 GEQLAAMDMMAVNPVDRILAPRFWAGIISMPLLATLFSAAGVIGGYIVGVVLIGVDDGAF 184 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + +I G+IK+ A+ +A+ +G+ + T VV S + Sbjct: 185 WSQMQQGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYEARPTPEGVSSATTRTVVYSSLL 244 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 VLWLDFIMTALMFN 258 >gi|91225579|ref|ZP_01260653.1| putative ABC superfamily transport protein [Vibrio alginolyticus 12G01] gi|269967998|ref|ZP_06182036.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91189699|gb|EAS75973.1| putative ABC superfamily transport protein [Vibrio alginolyticus 12G01] gi|269827355|gb|EEZ81651.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 263 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S G S + L++Q+Y VGV + ++++ Sbjct: 7 HFVASLGRRTLSICGAFGRATFMLIGALFSKPQPIRSFPLLVKQLYSVGVQSLAIIVVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA +IS+PLL ++ I GA +V + + Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I +IK A + VA+ G+ S + + T VV S Sbjct: 187 SFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|226532225|ref|NP_001143055.1| hypothetical protein LOC100275524 [Zea mays] gi|194697070|gb|ACF82619.1| unknown [Zea mays] gi|195613586|gb|ACG28623.1| hypothetical protein [Zea mays] Length = 335 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 89 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 148 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 149 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 208 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 209 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 268 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + I D + +F Sbjct: 269 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFIADFALSCLFFQ 324 >gi|212633565|ref|YP_002310090.1| hypothetical protein swp_0685 [Shewanella piezotolerans WP3] gi|212555049|gb|ACJ27503.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 235 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 121/234 (51%), Gaps = 1/234 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 A + K L L +Q+Y +GV + ++++ G V+A QG L FG E Sbjct: 1 MLWGAIAHRPRLKKGLPLLTKQLYVIGVQSMVIILVSGLFIGMVLALQGYNILVGFGTEE 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 ++++ LRE+G ++TA++ AGR+GSA+ AE+ MK E++ ++ M +D +R +I+ Sbjct: 61 SLGPMVALSLLRELGPVVTALLFAGRAGSALTAELALMKSTEQLSSLEMMAVDPLRQIIA 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIK 316 PR WA +ISLPLL ++ I G IV ++ I F+S S+ +I +IK Sbjct: 121 PRFWAGVISLPLLALMFTAIGIYGGHIVGVEWKGIDSGAFWSILQSSVEWRQDIVNCMIK 180 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + A + +A+ G+ V + + + T VVQS V+ +D L F Sbjct: 181 SLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVVQSSLAVLALDFLLTAMMFG 234 >gi|262273844|ref|ZP_06051657.1| uncharacterized ABC transporter permease component YrbE [Grimontia hollisae CIP 101886] gi|262222259|gb|EEY73571.1| uncharacterized ABC transporter permease component YrbE [Grimontia hollisae CIP 101886] Length = 260 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + +G + K L+ Q+Y VGV + ++++ Sbjct: 6 VQSLGARAMAVSQTMGRATFVLLGALVGKPQPKKMFPLLLTQIYSVGVRSLAIIMVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG L+ FGAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLSLQGYLVLADFGAESSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +++PR WA +IS+PLL ++ I G +V + I + + Sbjct: 126 TEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLAMIFMMVGIWGGQLVGVDWKGIDYGSY 185 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ S+ L +I IK+ A + +A+ G+ S + + T VV S Sbjct: 186 WAVMQSSVELGYDIGQSFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTALMFG 259 >gi|116331506|ref|YP_801224.1| membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125195|gb|ABJ76466.1| Membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 259 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 4/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G I E + ++ QMY GV + VV +++ TG +++ Sbjct: 9 LTEFFYASGFTILLVYESILNLPHGFFKRKEILDQMYITGVGSISVVSIVAIFTGMIMSL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L FGAE LM+I RE+ +TA+++A GSA+ AEIG+MKI+EEIDA+ Sbjct: 69 NTGLGLKDFGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D VR LI PRI I +P+L + + I+G +IV + I + +F Sbjct: 129 EVMSIDPVRYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDR 188 Query: 305 A----TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L +++ G++K + ++ G + +G+ VV S +VI Sbjct: 189 VASIPGLKDLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFT 248 Query: 361 DSLFAIFYF 369 + + Sbjct: 249 GYMITALLY 257 >gi|84502659|ref|ZP_01000778.1| membrane protein [Oceanicola batsensis HTCC2597] gi|84389054|gb|EAQ01852.1| membrane protein [Oceanicola batsensis HTCC2597] Length = 258 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 107/255 (41%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + +G V + + + +G +PVV L + Sbjct: 3 RLLGGIGAQVLAVLAAVGRVAIFAAVTLRHLVTPPFYGREFLGALLNIGWLSLPVVGLTA 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG +A Q S+F AE +++I +RE+G +L +MIA R S+I AEI +M Sbjct: 63 VFTGGALALQIYAGGSRFDAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+ T+ ++ L PR+ A ++++PLL + + I G V + A Sbjct: 123 KVTEQIDALVTLSTHPMKYLTVPRVLAGLVTVPLLVGVGDIIGIFGGYQVAVRSLGFNPA 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + ++ + L+K ++ G G + +G + V + Sbjct: 183 TYLQNTVDFLEPLDVLSSLVKGAAFGVIATLMGCYSGMNSGRGAQGVGAATKSSVEAASV 242 Query: 356 IVIIIDSLFAIFYFA 370 +++ + L +F+ Sbjct: 243 LILAANFLLTGVFFS 257 >gi|170703432|ref|ZP_02894205.1| protein of unknown function DUF140 [Burkholderia ambifaria IOP40-10] gi|170131663|gb|EDT00218.1| protein of unknown function DUF140 [Burkholderia ambifaria IOP40-10] Length = 255 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ +GR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFSGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|116328041|ref|YP_797761.1| membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120785|gb|ABJ78828.1| Membrane protein of an ABC transporter complex [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 259 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 4/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G I E + ++ QMY GV + VV +++ TG +++ Sbjct: 9 LTEFFYASGFTILLVYESILNLPHGFFKRKEILDQMYITGVGSIFVVSIVAIFTGMIMSL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L FGAE LM+I RE+ +TA+++A GSA+ AEIG+MKI+EEIDA+ Sbjct: 69 NTGLGLKDFGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKISEEIDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D VR LI PRI I +P+L + + I+G +IV + I + +F Sbjct: 129 EVMSIDPVRYLIFPRILGFSIMVPVLCVYSTILGILGGAIVGYFQLGIDYFTYFRDVFDR 188 Query: 305 A----TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L +++ G++K + ++ G + +G+ VV S +VI Sbjct: 189 VASIPGLKDLYVGILKGFIFGVIVSAISCSHGLRTSGGAIGVGRATRESVVTSFLMVIFT 248 Query: 361 DSLFAIFYF 369 + + Sbjct: 249 GYMITALLY 257 >gi|261344896|ref|ZP_05972540.1| toluene tolerance ABC efflux transporter, permease [Providencia rustigianii DSM 4541] gi|282567036|gb|EFB72571.1| toluene tolerance ABC efflux transporter, permease [Providencia rustigianii DSM 4541] Length = 260 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F G +F L++Q+Y VGV + +V + Sbjct: 4 KAIAAFGRRWIETFAAFGRAGYMLFRALFGKPEFAKQWPLLMQQLYSVGVQSLLIVAVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ IIG +IV + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSSMQSSIEWRLDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LSVLGLDFVLTALMFG 259 >gi|313200036|ref|YP_004038694.1| hypothetical protein MPQ_0269 [Methylovorus sp. MP688] gi|312439352|gb|ADQ83458.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 259 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 133/262 (50%), Gaps = 8/262 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G +I+ + S A + +GE + IR++Y+ GV Sbjct: 1 MAEVLRGMGHRIIDRVWRLGSGARFFVYTLIYSGESFRRIH-------LTIREIYFTGVM 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLLIILVSAFFVGMVLALQGYNTLQKYGSSEAIGVLVALSLVRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 AI AEIG MK E++ A+ M + + +++PR WA ++S+PLL L + ++G +V Sbjct: 114 AITAEIGLMKTTEQLSAMEMMAVSPIARVVAPRFWAGVVSMPLLAALFSMVGVLGGYLVA 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ ++ +I G+IK+ A ++A+ EGF + + + Sbjct: 174 VPVIGVDNGAFWSQMQASVDFQADIVNGVIKSVVFGVACTMIALFEGFDAPPTAEGVSRA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIF 367 T VV S V+ +D + F Sbjct: 234 TTRTVVNSSLAVLGLDFILTSF 255 >gi|288930100|ref|ZP_06423938.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str. F0108] gi|288328573|gb|EFC67166.1| ABC transporter, permease [Prevotella sp. oral taxon 317 str. F0108] Length = 248 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + LG + G + + + F +++M +GV V +V+LISF GAVI Sbjct: 3 ILNYLNTLGQYLILMGRSFSRPERMRMFFKRYVKEMSQLGVDSVGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I ++ I+GA + + + Sbjct: 123 LDIMGVNSASYLILPKILGLVTIMPFLVIFSSAMGILGAYATAYIGHILTPDDLTLGIQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ ++K+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 183 AFKPWFMWMSIVKSLFFAYIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFSDVF 242 Query: 364 FAIFYF 369 Sbjct: 243 LTQMLS 248 >gi|254253460|ref|ZP_04946778.1| ABC-type organic solvent resistance transport system permease protein [Burkholderia dolosa AUO158] gi|124896069|gb|EAY69949.1| ABC-type organic solvent resistance transport system permease protein [Burkholderia dolosa AUO158] Length = 255 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 130/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ S + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQSGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|212711087|ref|ZP_03319215.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM 30120] gi|212686255|gb|EEB45783.1| hypothetical protein PROVALCAL_02156 [Providencia alcalifaciens DSM 30120] Length = 262 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I F G +F L++Q+Y VGV + +V + Sbjct: 6 KAIAAFGRRWIETFAAFGRAGYLLFGALFGKPEFGKQWPLLVKQLYSVGVQSLLIVAVSG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 66 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA IS+PLL+++ IIG +IV + I Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDPG 185 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ ++ IK+ A + +A+ G+ S + + T VV + Sbjct: 186 FFWSSMQSSVEWRLDLVNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTKTVVHAS 245 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 LSVLGLDFVLTALMFG 261 >gi|165976711|ref|YP_001652304.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250627|ref|ZP_07336824.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252079|ref|ZP_07338248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246209|ref|ZP_07528290.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250543|ref|ZP_07532487.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252926|ref|ZP_07534814.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255189|ref|ZP_07537007.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|165876812|gb|ABY69860.1| probable permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649061|gb|EFL79248.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650615|gb|EFL80774.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852818|gb|EFM85042.1| hypothetical protein appser1_14130 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857436|gb|EFM89548.1| hypothetical protein appser4_13230 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859564|gb|EFM91589.1| hypothetical protein appser6_14370 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862062|gb|EFM94038.1| hypothetical protein appser9_14250 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 258 Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 124/253 (49%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G +F+ LI+Q+Y +GV + +++L Sbjct: 5 ISGIGSTVIDFIRAFGRATFMLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 IGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L + I G S+V + + F Sbjct: 125 TEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSF 184 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +S ++ +++ G IK+ A A+ +A+ G+ S + + T VV + +V Sbjct: 185 WSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVV 244 Query: 358 IIIDSLFAIFYFA 370 + +D + F Sbjct: 245 LGLDFILTAIMFG 257 >gi|237747263|ref|ZP_04577743.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] gi|229378614|gb|EEO28705.1| ABC transport system permease [Oxalobacter formigenes HOxBLS] Length = 258 Score = 175 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N ++G K K IND I +I + + Q++++G + Sbjct: 3 NFISNLGYKTRKSINDIGYATRIFLSLIRALPQVLKRP-------RLITDQIFFIGNKSL 55 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L ++G+E L+++ RE+G ++TA++ AGR+G+++ Sbjct: 56 IIICVSGLFVGFVLGLQGYYILVRYGSEQALGVLVTLALTRELGPVVTALLYAGRAGTSL 115 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M ++ V+ +++PR WA I+S+P+L L + + +IG IV Sbjct: 116 TAEIGLMKAGEQLAAMDMMAVNPVKRILAPRFWAGIVSMPILATLFSAAGVIGGYIVGVI 175 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + +I G+IK+ A+ +A+ +G+ + T Sbjct: 176 LIGVDDGAFWSQMQEGVDIWNDIGNGVIKSLVFGFAVTFMALFQGYESRPTPEGVSSATT 235 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S +V+ +D + F Sbjct: 236 RTVVYSSLLVLWLDFIMTALMFN 258 >gi|242073950|ref|XP_002446911.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor] gi|241938094|gb|EES11239.1| hypothetical protein SORBIDRAFT_06g024700 [Sorghum bicolor] Length = 338 Score = 175 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 110/236 (46%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 92 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSAGVALLTAAFVGMAFTIQFVREFTRLG 151 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++TAV+ AGR GSA AE+G+M+++E+ D +R +G V Sbjct: 152 LHRSVGGVLALALARELSPVVTAVVAAGRVGSAFAAELGTMQVSEQTDTLRVLGAHPVDY 211 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 212 LVVPRVLACVLALPVLTLISFALGLASSAFLADSVFGVSVSIILESARRALRPWDLISSL 271 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 272 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 327 >gi|221134714|ref|ZP_03561017.1| hypothetical protein GHTCC_07282 [Glaciecola sp. HTCC2999] Length = 258 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 132/256 (51%), Gaps = 2/256 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +V+ ++ G + + K + ++Q+Y VGV + ++++ Sbjct: 3 WVVQVGANTLDTIRSFGRAFLMLTGALIAVPQLK-NIRLTLQQIYVVGVQSLLIILVSGL 61 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 62 FIGMVMALQGYTILVGYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 121 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR+WA IIS+P+L I+ + I+G +V + + Sbjct: 122 ATEQLSSLEMMAVDPLRRVVAPRVWAGIISMPMLAIIFSAIGILGGHLVGVDWLGVDSGS 181 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++S +T ++ G+IK+ A + +A+ +G+ S + + T VV S Sbjct: 182 YWSIMQATVDWNKDVVNGIIKSIVFAIVVTWIAIFKGYDAVPTSEGISQATTQTVVYSSL 241 Query: 356 IVIIIDSLFAIFYFAI 371 V+ +D + F I Sbjct: 242 AVLGLDFVLTALMFGI 257 >gi|317494033|ref|ZP_07952449.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917806|gb|EFV39149.1| hypothetical protein HMPREF0864_03218 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 260 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + F + G +F L +Q+Y VGV + ++I+ Sbjct: 5 ALASFGRRGINVCASFGRAGLMMFNALIGKPEFAKQWPLLRKQLYSVGVQSLLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSAVTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E+I ++ M +D +R +++PR WA IIS+PLLT + I G S+V + I Sbjct: 125 ATEQISSMEMMAVDPLRRIVAPRFWAGIISMPLLTAIFVAVGIWGGSVVGVDWKGIDSGF 184 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ +IK+ A I +A+ G+ S + + T VV S Sbjct: 185 FWSAMQGSVDFHTDLVNCMIKSVVFAITIMWIALFNGYDAIPTSEGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|322834661|ref|YP_004214688.1| hypothetical protein Rahaq_3972 [Rahnella sp. Y9602] gi|321169862|gb|ADW75561.1| protein of unknown function DUF140 [Rahnella sp. Y9602] Length = 260 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + G +F LI+Q+Y VGV + ++++ Sbjct: 4 KALASVGRRGINTCASFGRAGLMLFRALVGKPQFAKQWPLLIKQLYSVGVLSLLIILVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AE+G M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAELGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + + G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGVWGGSLVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQTAVDWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|115350388|ref|YP_772227.1| hypothetical protein Bamb_0333 [Burkholderia ambifaria AMMD] gi|172059407|ref|YP_001807059.1| hypothetical protein BamMC406_0342 [Burkholderia ambifaria MC40-6] gi|115280376|gb|ABI85893.1| protein of unknown function DUF140 [Burkholderia ambifaria AMMD] gi|171991924|gb|ACB62843.1| protein of unknown function DUF140 [Burkholderia ambifaria MC40-6] Length = 255 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|325983137|ref|YP_004295539.1| hypothetical protein NAL212_2576 [Nitrosomonas sp. AL212] gi|325532656|gb|ADZ27377.1| protein of unknown function DUF140 [Nitrosomonas sp. AL212] Length = 265 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + LGL S +IR++Y+ GV + ++++ Sbjct: 8 GIQSIGHRVIESIWRLGLASRFFILVLLKSGTSLRRFNLVIRELYFTGVLSLIIIVVSGL 67 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L ++G+E L+++ +RE+G ++ A++ A R+GSAI AEIG MK Sbjct: 68 FVGMVLGLQGYETLQKYGSESAVGTLVALSLVRELGPVVAALLFASRAGSAITAEIGLMK 127 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ A+ M +D + +++PR WA +IS+P L + + + G +V + + Sbjct: 128 ATEQLAAMGMMAVDPIARVVAPRFWAGVISMPFLAAMFSVMGVFGGYLVTVIFIGVDEGS 187 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++S+ S +I G IK+ F A+ +A+ EG+ + + T VV S Sbjct: 188 YWSQMQSAVDFRFDILNGFIKSCFFGVAVTAIAVFEGYDAPPTAEGVSGATTRTVVTSSL 247 Query: 356 IVIIIDSLFAIFYF 369 +++ +D + F F Sbjct: 248 VILGLDFILTAFMF 261 >gi|255070247|ref|XP_002507205.1| ATP-binding cassette superfamily [Micromonas sp. RCC299] gi|226522480|gb|ACO68463.1| ATP-binding cassette superfamily [Micromonas sp. RCC299] Length = 297 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 109/226 (48%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 + K + ++Q+ VG + V +L S G V Q + S+ G L+ Sbjct: 70 RVLWHRKLNMQQTLQQISRVGPDTLGVSMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLL 129 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + RE+ ++ A+++AGR GSA+ AE+G+M+++E++D +RT+G D V L++PR+ A Sbjct: 130 GLAFTRELTPVICAIVLAGRVGSAVAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVAC 189 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +SLP+L++++ + + ++ Y I ++ K Sbjct: 190 AVSLPILSVISFTIGMAASILLADIRYGISPNAIVDSAAKYLESFDVGVMCAKGFAFGSV 249 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I I++ G + +G+ T VV S+ + ++D ++F+F Sbjct: 250 ISIISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMFFF 295 >gi|238756123|ref|ZP_04617444.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473] gi|238705662|gb|EEP98058.1| hypothetical protein yruck0001_2780 [Yersinia ruckeri ATCC 29473] Length = 260 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++Q+Y VGV + ++++ Sbjct: 4 QTLASVGRKGINVCATFGRAGLMLFNAIVGRPQLRQQWPLLVKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V + I Sbjct: 124 KATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|254451544|ref|ZP_05064981.1| membrane protein [Octadecabacter antarcticus 238] gi|198265950|gb|EDY90220.1| membrane protein [Octadecabacter antarcticus 238] Length = 258 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 111/254 (43%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + +G + + TG+ + + + + +G +PVV L +F Sbjct: 4 SLASLGAGVLGLLAAVGRLATFTGQTISHLVRPPFYGREFANALLQIGYLSLPVVGLTAF 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK Sbjct: 64 FTGGALALQIYSGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ ++ L PR+ A + +P+L + + I G +V + A Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + ++I + L K ++ G + +G+ + VV + + Sbjct: 184 YLQNTADFLEPSDIVSSLAKGAVFGFIAALMGCYYGMNSERGAMGVGRATKSSVVAAAIL 243 Query: 357 VIIIDSLFAIFYFA 370 ++ + L +F+ Sbjct: 244 ILAANFLLTEAFFS 257 >gi|56697513|ref|YP_167881.1| membrane protein [Ruegeria pomeroyi DSS-3] gi|56679250|gb|AAV95916.1| membrane protein [Ruegeria pomeroyi DSS-3] Length = 260 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 110/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S G V + + + + L + +G +PVV L + TG +A Q Sbjct: 16 SVLASFGRVTLFALDAVSHILRPPYYPRELAIALLNIGWLSLPVVGLTAIFTGGALALQI 75 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 ++F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T Sbjct: 76 YAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVT 135 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 + ++ L +PR+ A +I++PLL + + I+G V + A + Sbjct: 136 LSTHPMKYLTAPRVLAALITVPLLVGIGDIIGIMGGYTVAVQNLGFNAAAYLQNTVDFLE 195 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ + L+K ++ G G + +G+ V + +++ + + Sbjct: 196 TRDVVSSLVKGAVFGVIAALMGCYYGMNSGRGAQGVGRATKGSVEAAAVLILAANFVLTG 255 Query: 367 FYFAI 371 +F+I Sbjct: 256 VFFSI 260 >gi|149277771|ref|ZP_01883911.1| ABC transporter, permease [Pedobacter sp. BAL39] gi|149231459|gb|EDM36838.1| ABC transporter, permease [Pedobacter sp. BAL39] Length = 269 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 116/245 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 L V F + L+RQ Y +G + ++ L F+TG V + Sbjct: 21 ISRMFLTLYDVCQFVTRFFKEGFLPPYEGKELMRQCYDIGYRSLALISLTGFITGVVFTK 80 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L++FGA + L+ I LR + LLTA++ AG+ GS+I AE+GSM++ E+IDA+ Sbjct: 81 QSRPSLAEFGATSWLPSLVGIALLRTLAPLLTALIAAGKVGSSIGAELGSMRVTEQIDAM 140 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 + + L+S R+ A I++P+LT ++GA + + + D FF + Sbjct: 141 EVSATNPFKFLVSTRVMASTITIPILTFYTAMVGMLGALLNVSLFEDTSARAFFQMSLES 200 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T +I +KA IG+V +G+ + +GK + VV + ++ I + + Sbjct: 201 ITFLDITASTVKAILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIGMFLIFIEEVIS 260 Query: 365 AIFYF 369 F+ Sbjct: 261 VQFFS 265 >gi|315022937|gb|EFT35960.1| ABC-type transport system involved in resistance to organic solvents, permease component [Riemerella anatipestifer RA-YM] gi|325336426|gb|ADZ12700.1| ABC-type transport system involved in resistance to organic solvents, permease component [Riemerella anatipestifer RA-GD] Length = 253 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 3/253 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + S +G + G+ K F L+R++ +GV+ +V+ S GA Sbjct: 1 MLKLSKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGA 60 Query: 181 VIAQQGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 V+A Q F ++ + E + ++++AG+ GS I + IG+M++ Sbjct: 61 VVAIQMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRV 120 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ MG++ LI P+I A +I PLL ++ I G + + A + Sbjct: 121 TEQIDALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADY 180 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + I+ K A I + G+ V S +G+ T VV ++ + Sbjct: 181 ITGIQRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAI 240 Query: 358 IIIDSLFAIFYFA 370 II + + + + Sbjct: 241 IIAELISTQLFLS 253 >gi|307564910|ref|ZP_07627431.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307346383|gb|EFN91699.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 248 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + + + + F S +R+M +GV+ + +V+LISF GAVI Q Sbjct: 7 LFSFGEYLMLMKRTFSRPERMRMFFKSYVREMSQLGVNSIGIVLLISFFIGAVICIQIRL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + L E + ++++G+ GS I +E+GSM++ ++IDA+ M Sbjct: 67 NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGSMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I + ++GA + + I A Sbjct: 127 GINSASYLILPKILGLMTLMPFLVIFSAAIGMVGAYSTAYIGHVISPADLTEGVQHHFNQ 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ ++K F A I V+ G++V S +GK T VV+S +++ D Sbjct: 187 WFMWMSILKGFFFAFIISSVSSYMGYSVKGGSQEVGKASTDAVVKSSVLILFSDVFLTQL 246 Query: 368 YF 369 Sbjct: 247 LS 248 >gi|171322154|ref|ZP_02911012.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] gi|171092530|gb|EDT37852.1| protein of unknown function DUF140 [Burkholderia ambifaria MEX-5] Length = 255 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPVKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|289207570|ref|YP_003459636.1| hypothetical protein TK90_0385 [Thioalkalivibrio sp. K90mix] gi|288943201|gb|ADC70900.1| protein of unknown function DUF140 [Thioalkalivibrio sp. K90mix] Length = 260 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 1/257 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I S + + G + AS + Q+Y VGV + ++I+ Sbjct: 4 AIASLGRSSLNALVVFGRAFLFLLQVLASLDIVIRRFGLTVVQIYSVGVRSLLIIIVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L FGA ++++ +RE+G ++TA++ AGR+GSA+ AE+G MK Sbjct: 64 FVGMVLGYQGYITLVNFGAAEALGGVVALSLVRELGPVVTALLFAGRAGSALTAELGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ A+ M ++ R + +PR A +S+PLL + + ++G IV + Sbjct: 124 TTEQLSAMEMMAVNPYRRIFAPRFVAGFLSMPLLAAIFSAVGVMGGYIVGVGMLGVDSGA 183 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +FS+ S ++ +G+IK+ + +A+ +GF S + + T VV S Sbjct: 184 YFSQMQSVTDWNEDVLSGVIKSIVFGFVVTWIAVFQGFNAMPTSEGISRATTQTVVVSSL 243 Query: 356 IVIIIDSLFAIFYFAIG 372 V+ +D + F G Sbjct: 244 AVLGLDFILTGLMFGTG 260 >gi|325519291|gb|EGC98730.1| hypothetical protein B1M_40153 [Burkholderia sp. TJI49] Length = 255 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKNVIAPRMWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|320538922|ref|ZP_08038598.1| putative phospholipid transporter subunit: membrane component of ABC superfamily [Serratia symbiotica str. Tucson] gi|320031082|gb|EFW13085.1| putative phospholipid transporter subunit: membrane component of ABC superfamily [Serratia symbiotica str. Tucson] Length = 260 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + + L++QMY +GV + ++++ Sbjct: 4 QALASLGRRCIDTSASFGRAGLMLFNALVGQPEPRKQWPLLLKQMYSIGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA +ISLPLLTI+ ++G +IV + I Sbjct: 124 KATEQISSLEMMAVDPLRRIVAPRFWAGLISLPLLTIIFVALGMLGGAIVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ L+K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWKKDLLNCLLKSVVFAITVTWIAIFNGYDAVPTSTGISQATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|312795842|ref|YP_004028764.1| Toluene transport system permease [Burkholderia rhizoxinica HKI 454] gi|312167617|emb|CBW74620.1| Toluene transport system permease [Burkholderia rhizoxinica HKI 454] Length = 255 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G+ ++ ++ + A + + S ++I+Q++++G + Sbjct: 1 MIATVGRAVLDGLSRTGYGARMFARLASECFPLLRRP-------RTVIQQIHFLGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D +R++++PR WA +I++P+L + + I+G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPIRVVVAPRFWAGVIAMPILAAIFSAVGIVGGYVVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ S L +I G+IK+ A+ VA+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQSGVDLRQDIGNGVIKSIVFGFAVTFVALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F Sbjct: 234 TVVFASLAVLGLDFLLTALMFN 255 >gi|307129071|ref|YP_003881087.1| putative toluene transporter subunit: membrane protein [Dickeya dadantii 3937] gi|306526600|gb|ADM96530.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 260 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + L +Q+Y VGV + ++++ Sbjct: 4 QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPAKQWPLLRKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLLT++ I G ++V + I Sbjct: 124 KTTEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWRKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|271498870|ref|YP_003331895.1| hypothetical protein Dd586_0293 [Dickeya dadantii Ech586] gi|270342425|gb|ACZ75190.1| protein of unknown function DUF140 [Dickeya dadantii Ech586] Length = 260 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + L +Q+Y VGV + ++++ Sbjct: 4 QALASLGRVGIQVCASFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ +IK+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVEWQKDLLNCVIKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|219870961|ref|YP_002475336.1| resistance to organic solvents ABC transporter permease [Haemophilus parasuis SH0165] gi|219691165|gb|ACL32388.1| ABC-type transport system involved in resistance to organic solvents, permease component [Haemophilus parasuis SH0165] Length = 257 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 126/255 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I +G +F+ I+Q++ +GV + +++L Sbjct: 2 EFISSIGASVIQAIRAMGRATFMLWGALVDKPEFRKHTPLFIKQLHVLGVQSLLIIMLSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA II++P+L ++ I G S+V + + Sbjct: 122 KATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVDWKGVDVG 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ST T+ ++ G IK+ A A+ +A+ G+ S + + T VV + Sbjct: 182 SFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTRTVVHASL 241 Query: 356 IVIIIDSLFAIFYFA 370 +++ +D + F Sbjct: 242 VILGLDFILTAIMFG 256 >gi|313206130|ref|YP_004045307.1| hypothetical protein Riean_0637 [Riemerella anatipestifer DSM 15868] gi|312445446|gb|ADQ81801.1| protein of unknown function DUF140 [Riemerella anatipestifer DSM 15868] Length = 253 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 3/253 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + S +G + G+ K F L+R++ +GV+ +V+ S GA Sbjct: 1 MLKLSKRMLTSVGEYVLLLGKVIKRPQKHNIFFKLLMREINDLGVNSFGLVLFTSIFVGA 60 Query: 181 VIAQQGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 V+A Q F ++ + E + ++++AG+ GS I + IG+M++ Sbjct: 61 VVAIQMYNNFKASTIPIPLYFIGYATKVVLILEFSPTIISLILAGKVGSYIASSIGTMRV 120 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+IDA+ MG++ LI P+I A +I PLL ++ I G + + A + Sbjct: 121 TEQIDALDIMGVNSPNFLILPKIVANVIFNPLLIAISIVFGIYGGYLAGVATGNWTEADY 180 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + I+ K A I + G+ V S +G+ T VV ++ + Sbjct: 181 ITGIQRYIPDYFIWYAFFKTVVFAFLIATIPAYFGYNVKGGSLEVGRASTQAVVWTMVAI 240 Query: 358 IIIDSLFAIFYFA 370 II + + + + Sbjct: 241 IIAELVSTQLFLS 253 >gi|114321371|ref|YP_743054.1| hypothetical protein Mlg_2222 [Alkalilimnicola ehrlichii MLHE-1] gi|114227765|gb|ABI57564.1| protein of unknown function DUF140 [Alkalilimnicola ehrlichii MLHE-1] Length = 259 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 1/254 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + +G A + +I+Q+Y VGV + ++++ Sbjct: 5 AFRNLGARTLAALGGVGRAHLLMFRLLAGLLRVLAQPRYIIQQLYAVGVLSLVIIVVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG + L FGA L+++ LRE+G ++TA++ AGR+GS++ AE+G MK Sbjct: 65 FVGMVLALQGYYTLVDFGAAESVGVLVALSLLRELGPVVTALLFAGRAGSSLTAEVGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +I+PR A ++++PLL + + I G +V + Sbjct: 125 ATEQLSSMEMMAVDPELRVIAPRFLACVVAVPLLAGIFSLVGIYGGYLVSVGLIGLDGGA 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ S + + ++ G+IK+ +G +A+ +G+ S + + T VV + Sbjct: 185 YWGNMQSAVSFSDDVLNGVIKSVVFGIVVGWIALYKGYEAVPTSEGVSRATTHGVVHASL 244 Query: 356 IVIIIDSLFAIFYF 369 V+ +D L F Sbjct: 245 AVLGLDFLLTALMF 258 >gi|134294506|ref|YP_001118241.1| hypothetical protein Bcep1808_0394 [Burkholderia vietnamiensis G4] gi|134137663|gb|ABO53406.1| protein of unknown function DUF140 [Burkholderia vietnamiensis G4] Length = 255 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|91774594|ref|YP_544350.1| hypothetical protein Mfla_0238 [Methylobacillus flagellatus KT] gi|91708581|gb|ABE48509.1| protein of unknown function DUF140 [Methylobacillus flagellatus KT] Length = 263 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 136/265 (51%), Gaps = 8/265 (3%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 +++ N+ IG +++ + + V+ +GE L IR++Y+ Sbjct: 2 FSAVANMLRGIGHRVIDRLWRFGAGIRFFFYVLIYSGESFRR-------LHLTIREIYFT 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ +F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR Sbjct: 55 GVLSLIIILVSAFFVGMVLALQGYNTLQRYGSSEAIGVLVALSLVRELGPVVTALLFAGR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+AI AEIG M+ E++ A+ M + + +++PR WA + S+PLL L + ++G Sbjct: 115 AGTAITAEIGLMRATEQLSAMEMMAVSPIARVVAPRFWAGLFSMPLLAALFSMVGVLGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V + F+S+ ++ +I G+IK+ A ++A+ EGF + + Sbjct: 175 LVAVPLIGVDAGAFWSQMQASVDFREDIVNGVIKSLVFGIACTMIALFEGFDAPPTAEGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367 + T VV S V+ +D + F Sbjct: 235 SRATTRTVVNSSLAVLGLDFIMTSF 259 >gi|224827292|ref|ZP_03700385.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002] gi|224600505|gb|EEG06695.1| protein of unknown function DUF140 [Lutiella nitroferrum 2002] Length = 261 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + + H+G + I + L ++ +G+ L IR++Y+ Sbjct: 2 FETLTAPLRHLGHVTINAIWRLGFASRFLLAILLQSGQSFRR-------LNLTIREVYFA 54 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V+ QG LS+FG+ L+++ LRE+G +L A++ A R Sbjct: 55 GVLSLIIIVVSGLFVGMVLGLQGYNTLSRFGSADALGALVALSLLRELGPVLAALLFASR 114 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSA+ AEIG MK E++DA+ M ++ + +++PR WA +IS+P+L L N + I G Sbjct: 115 SGSAMTAEIGLMKATEQLDAMSVMAVNPIARVVAPRFWAGVISMPVLAALFNVTGIFGGY 174 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 V + + F+S+ ++ L ++ GLIK+ F A+ ++A+ EG+ + + Sbjct: 175 FVGVQLIGLDEGTFWSQMQNSVDLHNDVINGLIKSLFFGIAVTLIAVFEGYDATPTAAGV 234 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++ +D + F F Sbjct: 235 SSATTRTVVTSALVILALDFVLTAFMF 261 >gi|148977765|ref|ZP_01814321.1| putative ABC superfamily transport protein [Vibrionales bacterium SWAT-3] gi|145962979|gb|EDK28249.1| putative ABC superfamily transport protein [Vibrionales bacterium SWAT-3] Length = 259 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I + + G + K L++Q+Y VGV + ++++ Sbjct: 4 KTIAGVGKRTLAICESFGRASLMLFGALFGIPRLK-NFPLLVKQLYSVGVQSLAIILVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I G +V + I Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGGQLVGVDWKGIDHG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 183 SFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 LAVLGLDFVLTALMFG 258 >gi|198282478|ref|YP_002218799.1| hypothetical protein Lferr_0338 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667295|ref|YP_002424668.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198246999|gb|ACH82592.1| protein of unknown function DUF140 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519508|gb|ACK80094.1| toluene tolerance protein Ttg2B, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 260 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 68/251 (27%), Positives = 126/251 (50%), Gaps = 1/251 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG + + L++Q+Y GV + ++++ +F TG Sbjct: 9 NLGRRTLRTVPNLGTASRFLLLSLFAVANRHFSIQQLLKQVYGFGVRSLLLMMVAAFFTG 68 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L +FGA L+++ LRE+G +LTA++ AGR+GSA+ AEI SMK E Sbjct: 69 MVLGFQGYYALVRFGATSALGTLVALSLLRELGPVLTALLFAGRAGSALTAEISSMKATE 128 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M ++ + +++PR+WA I+ +P+L ++ + I G ++ + F++ Sbjct: 129 QLSAMEMMAVNPLAWVVAPRLWAGILVVPILCVIFDLVGIFGGYLISVPVLGVDGGTFWA 188 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + S + +I TGL KA + +A +G+A + +G T VV + V+ Sbjct: 189 QMQSNVAFSGDILTGLFKALCFGLVVTWIAAWQGYAAQPTAEGVGNATTISVVTASLAVL 248 Query: 359 IIDSLFAIFYF 369 +D + F F Sbjct: 249 GLDFILTAFLF 259 >gi|152980680|ref|YP_001354988.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] gi|151280757|gb|ABR89167.1| ABC transport system permease protein [Janthinobacterium sp. Marseille] Length = 258 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 131/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 L IG+ + +F+ + +I +G + Q++++G Sbjct: 1 MIWLLETIGRLVREFVVNIGFATRTFFGIIGASGGLLRR-------FRLVTSQIHFIGNY 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+ Sbjct: 54 SLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ ++ +++PR WA +I++P+L + + I+G IV Sbjct: 114 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVIAMPILAAIFSAVGILGGYIVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S+ + +I G+IK+ A+ +A+ +G+ + + Sbjct: 174 VQLIGVDEGAFWSQMQGGVDVWNDIVNGVIKSIVFGFAVTFIALYQGYEAQPTPEGVARA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 234 TTRTVVIASLSVLWLDFLLTALMFS 258 >gi|261855373|ref|YP_003262656.1| hypothetical protein Hneap_0760 [Halothiobacillus neapolitanus c2] gi|261835842|gb|ACX95609.1| protein of unknown function DUF140 [Halothiobacillus neapolitanus c2] Length = 266 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 132/272 (48%), Gaps = 8/272 (2%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + N+F N +G+ + + + G ++ + + + ++++ Sbjct: 1 MNGYRNAFFNGLALLGQGALAAVAHAGQMILFTGQLL---WRLLPAWTRPR----LIVQE 53 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 +Y +GV + ++++ G V+ QG LS+F A ++++ +RE+G ++TA++ Sbjct: 54 LYAIGVLSLVIILISGGFVGLVLGLQGYNILSKFNATESLGVMVALSLVRELGPVVTALL 113 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 AGR+GSA+ AEI MK E++ A+ M +D +R +++PR W + S+PLL L + I Sbjct: 114 FAGRAGSAVTAEIALMKTTEQLSAMEMMAVDPLRRVVAPRFWGAVFSMPLLAGLFSLVGI 173 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 G + + A ++ + ++ G+IK+ +G++A+ EGF Sbjct: 174 AGGYFIGVVVLGVDPASYWGQIQQQMQPVDDVLNGVIKSLVFGAVVGLIAVFEGFNAEPT 233 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 S + + T VV S V+ +D + + F Sbjct: 234 SLGISRATTRTVVLSSLCVLGLDFILTAWMFG 265 >gi|317046704|ref|YP_004114352.1| hypothetical protein Pat9b_0470 [Pantoea sp. At-9b] gi|316948321|gb|ADU67796.1| protein of unknown function DUF140 [Pantoea sp. At-9b] Length = 260 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G F+ L++Q+Y VGV + ++++ Sbjct: 4 QALASLGRQGINTCAAFGRAGMMLFHALVGKPAFRKHAPLLVKQLYSVGVMSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R ++SPR WA IS+PLL ++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVSWKGIDPG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + +I +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQNAVDFRTDIINCIIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|170695754|ref|ZP_02886896.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] gi|170139359|gb|EDT07545.1| protein of unknown function DUF140 [Burkholderia graminis C4D1M] Length = 259 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 1/259 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 IG I G + + +Q+++VG + ++ Sbjct: 1 MIGTLISSVGRVVLDGLGTAGYATRFFLRLLVEFFPLLRRPRLVTKQIHFVGNYSLVIIA 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEI Sbjct: 61 VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G MK E++ A+ M +D V+++++PR+WA IIS+P+L + + I G +V + Sbjct: 121 GLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGIAGGYVVGVLLIGV 180 Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ + ++ G++K+ A+ VA+ +G+ + + T VV Sbjct: 181 DAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRATTKTVV 240 Query: 352 QSISIVIIIDSLFAIFYFA 370 + V+ +D L F+ Sbjct: 241 YASLAVLGLDFLLTALMFS 259 >gi|183597953|ref|ZP_02959446.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827] gi|188022725|gb|EDU60765.1| hypothetical protein PROSTU_01302 [Providencia stuartii ATCC 25827] Length = 260 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I G +F LI+Q+Y VGV + +V + Sbjct: 4 EAIAALGRRWIEIFSAFGRAGYMLFRSLIGKPEFSKQWPLLIKQLYAVGVQSLLIVAVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ I+G ++V + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGILGGALVGVDWKGIDEG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F++ S+ +I IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWASMQSSVDWRMDIVNCFIKSLVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|238025995|ref|YP_002910226.1| ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237875189|gb|ACR27522.1| ABC transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 255 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I G + + +Q++++G ++ + Sbjct: 2 ISAIGRFVLGGLERTGYATRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L+++GAE L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 62 VGFVLGLQGYYTLNRYGAEQSLGLLVALSLVRELGPVVTALLYAGRAGTSLTAEIGLMKA 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M +D ++ +I+PR+WA II++PLL+ + +IG +V + F Sbjct: 122 GEQLTALEMMAVDPIKTVIAPRMWAGIIAMPLLSAIFCAVGVIGGYVVGVILIGVDPGAF 181 Query: 298 FSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ +++ G++K+ A+ VA+ +G+ + + T VV + Sbjct: 182 WSQMQGGVDAWSDVGNGVLKSVVFGFAVTFVALYQGYEAKPTPEGVSRATTRTVVYASLA 241 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F+ Sbjct: 242 VLGLDFLLTALMFS 255 >gi|329297311|ref|ZP_08254647.1| hypothetical protein Pstas_13477 [Plautia stali symbiont] Length = 260 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 1/259 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 + + + G F+ L++Q+Y VGV + +++ Sbjct: 1 MWLQALASLGRQGINTYAAFGRASLMLFHALVGKPAFRKHAPLLVKQLYSVGVLSLLIIV 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG L+ + AE L+++ LRE+G ++TA++ AGR+GSA+ AEI Sbjct: 61 VSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G MK E++ ++ M +D +R ++SPR WA IS+PLL ++ I G ++V + I Sbjct: 121 GLMKATEQLSSMEMMAVDPLRRVVSPRFWAGFISMPLLALIFTAVGIAGGALVGVAWKGI 180 Query: 293 PFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S + ++ LIK+ A + +A+ G+ S + + T VV Sbjct: 181 DPGFFWSTMQNAVDFRTDVINCLIKSAVFAITVTWIALFNGYDAIPTSEGISRATTRTVV 240 Query: 352 QSISIVIIIDSLFAIFYFA 370 + V+ +D + F Sbjct: 241 HASLAVLGLDFVLTALMFG 259 >gi|261868147|ref|YP_003256069.1| ABC transporter permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413479|gb|ACX82850.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D11S-1] Length = 261 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I ++ + A +G + LI+Q++ +GV + +++L Sbjct: 6 ISALGRNAINFARAMGRAGFLLFGALIGKPQINKHFPLLIKQLHVLGVQSLLIIMLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +I++P+L+I+ I G S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILSIIFIAIGIWGGSLVGVDWKGVDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S+ T + +I G IK+ F A A+ +A+ G+ S + K T VV + + Sbjct: 186 WSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFA 370 ++ +D + F Sbjct: 246 ILGLDFVLTAIMFG 259 >gi|186684564|ref|YP_001867760.1| hypothetical protein Npun_F4449 [Nostoc punctiforme PCC 73102] gi|186467016|gb|ACC82817.1| protein of unknown function DUF140 [Nostoc punctiforme PCC 73102] Length = 218 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 105/213 (49%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 ++ + G + V+L+S G + Q A +L +FGAE ++ RE+ +LT Sbjct: 1 MQHLVTAGPGSISPVLLVSGFAGMIFTIQTARELVRFGAENAVGGAFALAFCRELAPILT 60 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 A ++AG+ GSA AEIG+M++ E+IDA+ + D + L+ PR+ A + +PL+TILA Sbjct: 61 ASIMAGQVGSAFAAEIGAMRVTEQIDALYMLKTDPIDYLVLPRVIACCLMVPLMTILALV 120 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + IIG +Y I F + +++F L+K + ++ G Sbjct: 121 TGIIGGVFAGSYFYKIIPETFLESVRNFLEPSDLFIILLKGFIFGVLVAVIGCSWGLTTK 180 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +G+ T VV S + I+D ++ F Sbjct: 181 GGAKEVGESATKAVVTSWVSIFIMDFFLSLLLF 213 >gi|226229261|ref|YP_002763367.1| putative transporter [Gemmatimonas aurantiaca T-27] gi|226092452|dbj|BAH40897.1| putative transporter [Gemmatimonas aurantiaca T-27] Length = 275 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 112/264 (42%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 L + +I + +G + ++ +L + Sbjct: 4 PREPAGLPERLHDRITALGGVTRRLIEPIGTGARFVRDVARATKDTAQWLPEFSTHARVL 63 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV +P+ I I+ TG V+A ++ + F L+ E+ +LT + +AGR Sbjct: 64 GVDSLPIGIFIALFTGIVLALLASYSVGDLVPPYFVGTLVQKTITLELAPVLTGLALAGR 123 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 G+ I AE+G+M++ E+IDA+ T+ D + L+ PR+ A + P++ +A ++ Sbjct: 124 VGANIAAELGTMRVTEQIDALETLTFDPMSHLVVPRVLASALMFPIVVGMAMLVGLLSGW 183 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + DI F ++ GL+K+ A+ ++ + G + +G Sbjct: 184 VASIVLLDIATPQFLKGVRLFFQPFDVQYGLVKSASFGAAVALIGCRAGLNTLGGAQGVG 243 Query: 344 KKVTTCVVQSISIVIIIDSLFAIF 367 + T VV S +++++D+ +AI Sbjct: 244 RSATRAVVISAVMILVLDAFWAIV 267 >gi|146313264|ref|YP_001178338.1| hypothetical protein Ent638_3630 [Enterobacter sp. 638] gi|145320140|gb|ABP62287.1| protein of unknown function DUF140 [Enterobacter sp. 638] Length = 260 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V ++ I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVQWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAVDLRMDLVNCLIKSVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|254229285|ref|ZP_04922703.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262393183|ref|YP_003285037.1| ABC transporter permease component YrbE [Vibrio sp. Ex25] gi|151938209|gb|EDN57049.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262336777|gb|ACY50572.1| uncharacterized ABC transporter permease component YrbE [Vibrio sp. Ex25] Length = 263 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S G + + L++Q+Y VGV + ++++ Sbjct: 7 HFVASLGRRTLSICGAFGRATFMLIGALFTKPQPLKSFPLLVKQLYSVGVQSLAIIVVSG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 67 LFIGMVLSLQGYVVLVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D ++ +I+PR WA IS+PLL ++ I GA +V + + Sbjct: 127 KATEQLSSLEMMAVDPLKRVIAPRFWAGAISMPLLAMIFMAVGIWGAQLVGVDWKGVDHG 186 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I +IK A + VA+ G+ S + + T VV S Sbjct: 187 SFWSAMQSSVELGQDIGNSMIKCFAFAITVTWVALFNGYDAIPTSEGISRATTRTVVHSS 246 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 247 LAVLGLDFVLTALMFG 262 >gi|298491186|ref|YP_003721363.1| hypothetical protein Aazo_2257 ['Nostoc azollae' 0708] gi|298233104|gb|ADI64240.1| protein of unknown function DUF140 ['Nostoc azollae' 0708] Length = 265 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 1/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 I G+ K K + + Q+ VG + + +L + GAV Q A + F Sbjct: 19 AAILLGGQVIVHLMKGKIHRRNTLEQLAAVGPDSLFIALLTAVFVGAVFTIQVAREFINF 78 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA ++++ RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + Sbjct: 79 GAGNLVGGVLAVALTRELTPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLILKTDPID 138 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PRI A ++ LP+LT+L+ + + G I+ Y++ VF + + +I + Sbjct: 139 YLVIPRIIACLLMLPILTLLSLLAGMFGGLIIATHIYNLSDTVFLDSARNFLDIWDICSA 198 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 +IKA I I+ G + +G+ TT VV ++ I+ I + + + + G Sbjct: 199 MIKAGCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIFISNFFLSWLMFQETG 258 >gi|33151499|ref|NP_872852.1| permease [Haemophilus ducreyi 35000HP] gi|33147719|gb|AAP95241.1| probable permease [Haemophilus ducreyi 35000HP] Length = 259 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 72/251 (28%), Positives = 120/251 (47%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 G +F LI+Q+Y +GV + ++IL G Sbjct: 8 HLGEHCIQLVKTFGRATLMLWGALIGKPQFSKHTPLLIKQLYILGVQSLLIIILSGLFIG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEI MK E Sbjct: 68 MVLALQGYVVLVDFAAESSLGTLISLSLLRELGPVVTALLFAGRAGSALTAEIALMKATE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ M +D +R +I+PR WA +IS+P+L ++ I G S+V + + F+S Sbjct: 128 QLSSLEMMAVDPLRRVIAPRFWAGVISMPILAVIFTAIGIWGGSLVGVDWKGVDSGSFWS 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + ++ G IK+ A A+ +A+ G+ S + + T VV + IV+ Sbjct: 188 VMQHSVNGQDLINGFIKSIIFAIAVVWIALFNGYDSTATSEGISQATTRTVVHASLIVLG 247 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 248 LDFILTAMMFG 258 >gi|167854684|ref|ZP_02477464.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755] gi|167854221|gb|EDS25455.1| hypothetical protein HPS_01292 [Haemophilus parasuis 29755] Length = 258 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 126/255 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I +G +F+ I+Q++ +GV + +++L Sbjct: 3 EFISSIGASVIQAIRAMGRATFMLWGALVGKPEFRKHTPLFIKQLHVLGVQSLLIIMLSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLGLQGYVVLVDFSAETSLGQLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA II++P+L ++ I G S+V + + Sbjct: 123 KATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILAVIFTAIGIWGGSLVGVDWKGVDVG 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ST T+ ++ G IK+ A A+ +A+ G+ S + + T VV + Sbjct: 183 SFWSVMQSTVTMGDLLNGFIKSIVFAFAVVWIALFNGYDALPTSEGISQATTRTVVHASL 242 Query: 356 IVIIIDSLFAIFYFA 370 +++ +D + F Sbjct: 243 VILGLDFILTAIMFG 257 >gi|24214757|ref|NP_712238.1| ABC transporter membrane protein [Leptospira interrogans serovar Lai str. 56601] gi|45657720|ref|YP_001806.1| ABC transporter permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195758|gb|AAN49256.1| membrane protein of an ABC transporter complex [Leptospira interrogans serovar Lai str. 56601] gi|45600960|gb|AAS70443.1| ABC transporter permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 259 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 4/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G I E + ++ QMY GV + VV +++ TG +++ Sbjct: 9 LTEFFYASGFTILLVYESILNLPYSFFKRKEILDQMYITGVGSISVVSIVAVFTGMIMSL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L FGAE LM+I RE+ +TA+++A GSA+ AEIG+MK++EE+DA+ Sbjct: 69 NTGLGLKDFGAEGQIGLLMTITLTREMSPFMTALILAASIGSAMAAEIGTMKVSEEVDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D VR LI PRI + +P+L + + I+G +IV + I + +F Sbjct: 129 EVMSIDPVRYLIFPRILGFSVMVPVLCVYSTALGILGGAIVGYFQLGIDYFTYFRDVFDR 188 Query: 305 A----TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L +++ G++K + ++ G + +G+ VV S +VI Sbjct: 189 IASIPGLKDLYVGILKGFIFGIIVSAISCSHGLRTSGGAIGVGRATRESVVASFLMVIFT 248 Query: 361 DSLFAIFYF 369 + ++ Sbjct: 249 GYMITALFY 257 >gi|282860201|ref|ZP_06269275.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] gi|282587022|gb|EFB92253.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] Length = 248 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + G + + + FL S IR+M +GV + +V+LISF GAVI Sbjct: 3 IVNWLTSFGKYLMLMGRTFSRPERIRMFLKSYIREMSQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + ++++G+ GS I +E+G+M++ ++IDA Sbjct: 63 QIRLNVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I + + ++GA + + I + Sbjct: 123 LEIMGINSASYLILPKILGLVTIMPFLVIFSAATGMLGAYATAYIGHIISPSDLTDGVQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ +IK+ F A I VA G+ V S +GK T VV S +V+ D Sbjct: 183 QFNQWFMWMSIIKSLFFAFIIASVAAYMGYTVKGGSQEVGKASTDAVVTSSVLVLFSDVF 242 Query: 364 FAIFYF 369 Sbjct: 243 LTQILS 248 >gi|193214677|ref|YP_001995876.1| hypothetical protein Ctha_0964 [Chloroherpeton thalassium ATCC 35110] gi|193088154|gb|ACF13429.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 248 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 116/245 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG + + ++ QM ++GV +P+V+L+S TGA+ A Sbjct: 4 FTNFFSELGEATLLFWAVLKALPRIFRDRTLVLAQMSHIGVDSLPLVLLVSIFTGAIAAW 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A+Q+ + S + + E+G +LT ++IAGR G++I AE+G+MK+ E+IDA+ Sbjct: 64 QAAYQMKGLAPLSLVGGITSRVIIIELGPVLTGIIIAGRVGASIAAELGTMKVTEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M + R L PRI A I +P+L I AN AI+GA IV + I VFF + Sbjct: 124 EIMAISPSRYLAMPRILATTIMMPVLVIFANIIAIVGAFIVSNMFLGISKQVFFDSLKTF 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ L+K+ + GF + +G V S ++++I D Sbjct: 184 FYTGDVVGALVKSGIFGLMTSLAGCHIGFRTDGGAEGVGISTIRSFVVSSAMILIADYFL 243 Query: 365 AIFYF 369 F F Sbjct: 244 WFFLF 248 >gi|317050884|ref|YP_004112000.1| hypothetical protein Selin_0700 [Desulfurispirillum indicum S5] gi|316945968|gb|ADU65444.1| protein of unknown function DUF140 [Desulfurispirillum indicum S5] Length = 256 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 76/254 (29%), Positives = 126/254 (49%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G++ ++ L + +Q +GV+ + VV+L Sbjct: 3 RILNSLGQGMYHAMQVSGMIFFTFLHSALWLFRPPLRLRVIFKQFESIGVNSIFVVLLTG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+A Q SQF AE + ++ RE+G +LTA+M+ R+GSA+ AE+G+M Sbjct: 63 TFTGMVLALQLYIGFSQFHAEYLVGAVSALAIFRELGPVLTALMVTARAGSAMAAELGTM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+RTM +D + L +PRI A + LP+LT++AN AI G V K I Sbjct: 123 KVTEQIDALRTMAVDPHQYLATPRILASFVMLPVLTMVANAVAIGGCYFVGVKLLGINPV 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 VF + + +I GLIK+ +G V G + +G+ TT VV + + Sbjct: 183 VFVDQIIIFVDMGDIINGLIKSAAFGLVMGSVCCGIGMNASKGAAGVGQATTTSVVLTST 242 Query: 356 IVIIIDSLFAIFYF 369 +++ +D + F Sbjct: 243 LILAVDYILTALMF 256 >gi|282878075|ref|ZP_06286880.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] gi|281299815|gb|EFA92179.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] Length = 250 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 2/249 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I + G + G + + F +++M +GV +P+V+LISF GAV Sbjct: 3 IKLLITYLTTFGEYLILMGRTFRRPERMRMFFKRYVKEMCQLGVDSIPLVLLISFFIGAV 62 Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + ++ + + L E +++AG+ GS I +E+G+M++ ++ Sbjct: 63 ICIQMKVNVQSPWMPRWTTGYVTREIFLLEFASAFMCLILAGKVGSNIASELGTMRVTQQ 122 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I LI +P L I ++ + IIGA + + Sbjct: 123 IDALDIMGVNPASYLILPKIAGLITIMPFLVIFSSVAGIIGAYGTA-YSGVLSPDDLTAG 181 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 F + + ++ +IK+ A I V+ G++V S +G+ T VV S +V+ Sbjct: 182 FQYSFNVWFVWMSIIKSIVFAFIIASVSSFYGYSVRGGSVEVGEASTNAVVSSSVLVLFA 241 Query: 361 DSLFAIFYF 369 D Sbjct: 242 DVFLTPLLS 250 >gi|161523498|ref|YP_001578510.1| hypothetical protein Bmul_0318 [Burkholderia multivorans ATCC 17616] gi|189351729|ref|YP_001947357.1| putative ABC transporter permease [Burkholderia multivorans ATCC 17616] gi|221201636|ref|ZP_03574674.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221207289|ref|ZP_03580299.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221213427|ref|ZP_03586402.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160340927|gb|ABX14013.1| protein of unknown function DUF140 [Burkholderia multivorans ATCC 17616] gi|189335751|dbj|BAG44821.1| putative ABC transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221166879|gb|EED99350.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|221172877|gb|EEE05314.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221178452|gb|EEE10861.1| toluene tolerance ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 255 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + ++ + +Q++++G Sbjct: 1 MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWAGIITMPLLAAIFNAVGVLGGYFVGVVL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|183221249|ref|YP_001839245.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911340|ref|YP_001962895.1| ABC transporter membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776016|gb|ABZ94317.1| Membrane protein of an ABC transporter complex [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779671|gb|ABZ97969.1| ABC-type transport system, permease; putative resistance to organic solvant; putative membrane protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 258 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 4/246 (1%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + +G + S++ ++ QM+ GV + VV ++S TG ++ Sbjct: 12 LLYAIGYTVLLLFRAIGQSHQLYFKRREILEQMFIAGVGSLFVVSIVSVFTGMILGLNTG 71 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGAE L++I RE+ +T++++A GSA+ AEIG+MK++EEIDA+ M Sbjct: 72 LGLRDFGAEGQIGLLLTITLTREMSPFMTSLILAASVGSAMAAEIGTMKVSEEIDALEVM 131 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF----SRFHS 303 + +R L+ PRI + +P+L + + I+G IV I +F R S Sbjct: 132 SISPIRYLVMPRIVGFSLMVPVLCVYSAALGILGGGIVGHFQLGIDIISYFQDVYYRISS 191 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 L +++ GL+K +I ++ +G + +G+ VV S +VI + Sbjct: 192 VPGLKDLYVGLLKGYVFGLSIATISCSQGLRTEGGAIGVGQTTRKAVVTSFLMVIFSGYV 251 Query: 364 FAIFYF 369 ++ Sbjct: 252 LTALFY 257 >gi|317504956|ref|ZP_07962905.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella salivae DSM 15606] gi|315663948|gb|EFV03666.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella salivae DSM 15606] Length = 252 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 1/249 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G + A + + F ++M +GV + +V+LISF GAV Sbjct: 4 FKPLYNYLTTFGSYLILMWRSLAIPDRMRMFFKRYTKEMSQLGVDSIGIVLLISFFIGAV 63 Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + + + L E + +++AG+ GS I +E+G+M++ ++ Sbjct: 64 ICIQMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 123 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I L+ +P L I ++ I+GA + + + Sbjct: 124 IDALDIMGVNSANYLILPKILGLVTMMPFLVIFSSALGILGAYSTAYIGHLLTPDDLTLG 183 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + I+ ++K+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 184 IQHSFNSWFIWMSILKSMFFAFIIASVSSYFGYTVEGGSVEVGKASTDAVVSSSVLILFS 243 Query: 361 DSLFAIFYF 369 D Sbjct: 244 DVFLTQLLS 252 >gi|51210044|ref|YP_063708.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata var. liui] gi|50657798|gb|AAT79783.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata var. liui] Length = 252 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 1/246 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 I + ++ S++ Q+ VG + +VI+ +F G V Q Sbjct: 1 MFKFFRSCIYFKIKKKSAIELLHSSYFSVLEQIKIVGPDSLNIVIITAFFLGMVFTIQIV 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + A +++I +RE+ +LT+V+I GR S AE+ +M + E+++A+ + Sbjct: 61 KEFLYINAAALIGSVLTIAFIRELSPVLTSVIIVGRIASYFTAELATMSVTEQLNALYLL 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 + ++ L+ PR+ A I+ LP L I + +++ +S + + Y I +FF S+ + Sbjct: 121 ETNPLKYLVLPRVIACILMLPCLNIFSFITSLFSSSFICFTVYSIHPEIFFVSSFSSLIV 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-I 366 +IF L+K I ++ G + +GK T VV S+ V I D L + I Sbjct: 181 QDIFKSLLKTIVFGFLIASISCFWGLKATGGAKGVGKSTTLSVVTSLLAVFIFDFLLSYI 240 Query: 367 FYFAIG 372 + +G Sbjct: 241 MFSKLG 246 >gi|332140253|ref|YP_004425991.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii str. 'Deep ecotype'] gi|327550275|gb|AEA96993.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii str. 'Deep ecotype'] Length = 258 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 130/257 (50%), Gaps = 2/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + +G + + K + I+Q+Y VGV + ++++ Sbjct: 2 KFFQSTGAKTIGKITAIGRAALMLFGALIAIPRAK-NIPLTIKQLYVVGVQSLLIIMVSG 60 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 61 LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 120 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA ++++P+L I+ + I+G +V + + Sbjct: 121 KATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVDWLGVDAG 180 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S ST ++ G+IK+ A + +A+ +G+ S + K T VV S Sbjct: 181 SYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATTETVVYSS 240 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ +D + F I Sbjct: 241 LAVLGLDFVLTALMFGI 257 >gi|152996434|ref|YP_001341269.1| hypothetical protein Mmwyl1_2412 [Marinomonas sp. MWYL1] gi|150837358|gb|ABR71334.1| protein of unknown function DUF140 [Marinomonas sp. MWYL1] Length = 260 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 129/252 (51%), Gaps = 2/252 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNT-GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 K I +G +FK + L++Q+Y VGV + ++I+ Sbjct: 2 KSIELLGASLLDWLEAVGRAGIFLVQSIFRLPVRFKESVNLLVKQLYSVGVLSLVIIIVS 61 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 G V++ QG L++FG+E L+++ LRE+ ++TA++ AGR+GS++ AEIG Sbjct: 62 GAFIGMVLSLQGYSILAKFGSEEAVGQLLALSLLRELSPVVTALLFAGRAGSSLTAEIGL 121 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK E++ + MG+D +R +I+PR A +I LP+L+++ + S I+G +V ++ + Sbjct: 122 MKATEQLSSFEMMGVDPLRRVIAPRFIAGVICLPILSLIFSASGILGGHLVSVQWLGVYD 181 Query: 295 AVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F+S + +I GLIKA + + +A+ +G+ S +GK T VV Sbjct: 182 GAFWSSMQQSVYFDTDIMNGLIKALCFSVVVTWIAVYQGYECVPTSEGIGKATTRTVVLG 241 Query: 354 ISIVIIIDSLFA 365 ++ +D + Sbjct: 242 SLAILALDFILT 253 >gi|329942978|ref|ZP_08291752.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10] gi|313848135|emb|CBY17136.1| putative permease component of ABC transporter [Chlamydophila psittaci RD1] gi|325506979|gb|ADZ18617.1| putative permease component of ABC transporter [Chlamydophila psittaci 6BC] gi|328814525|gb|EGF84515.1| hypothetical protein G5Q_0652 [Chlamydophila psittaci Cal10] gi|328914810|gb|AEB55643.1| ABC transporter, permease protein, putative [Chlamydophila psittaci 6BC] Length = 261 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 116/253 (45%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + C LG + T S K S+ Q Y +GV+ +PVV+L VTG Sbjct: 8 RIFQILCVFPLELGRWMGFTCAVIKSFSWKKSLFRSISIQGYDIGVASLPVVMLTGAVTG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 68 IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A I+++P L I A +S I ++ + + V+ Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIMAMPALVIAAVWSGIFCGYLLCRYAFQLSAQVYLH 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 L++I ++K+ I +A +G + K T VV S ++ Sbjct: 188 MVSGNVFLSDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 248 ANCVITAFFHVLG 260 >gi|89898182|ref|YP_515292.1| ABC transporter [Chlamydophila felis Fe/C-56] gi|89331554|dbj|BAE81147.1| ABC transporter [Chlamydophila felis Fe/C-56] Length = 261 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 117/253 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + LG + T S K L S Q Y +GV+ +PVV+L VTG Sbjct: 8 RIFRILYTFPLELGRWMGFTYAVIKSFSWKKSLLRSTSMQGYDIGVASLPVVMLTGAVTG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 68 IVLALQSYYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A II++P L I A ++ I ++ + +P V+ Sbjct: 128 QVSAMETLGVNPLEYFALPRIIAGIIAMPALVIAAVWAGIFCGYLLCRCAFQLPAHVYLH 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +++I ++K+ I +A +G + K T VV S ++ Sbjct: 188 MVSGNVLISDIVMVIVKSLVFGFIITSLACYQGLGKHCRIMDVAKVTTAGVVTSYISILF 247 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 248 ANCVITTFFHLLG 260 >gi|118594041|ref|ZP_01551388.1| hypothetical protein MB2181_00195 [Methylophilales bacterium HTCC2181] gi|118439819|gb|EAV46446.1| hypothetical protein MB2181_00195 [Methylophilales bacterium HTCC2181] Length = 261 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + S+ LG S + IR++Y+ GV + ++I+ +F Sbjct: 8 IAGVGSSFRSKMTRLGAGTRLFFLILIYSVDSFKRIGLTIREIYFTGVLSLVIIIVSAFF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+AI AEIG MK Sbjct: 68 VGMVLGLQGYYTLEKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGTAITAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M + V +I+PR WA +IS+P+L + + I+G + + F Sbjct: 128 TEQLSAMEVMAVSPVARIIAPRFWAGMISMPILATIFSMVGILGGYFIAVLVIGVDEGAF 187 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + + +I G IK+ A I+A+ EGF + + + T VV S Sbjct: 188 WSQMQANVDFSNDIVDGAIKSIVFGFACTIIALFEGFDAPPTAEGVSRATTRTVVISSLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F F Sbjct: 248 VLGLDFILTSFMFV 261 >gi|292490486|ref|YP_003525925.1| hypothetical protein Nhal_0342 [Nitrosococcus halophilus Nc4] gi|291579081|gb|ADE13538.1| protein of unknown function DUF140 [Nitrosococcus halophilus Nc4] Length = 260 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 +++ LG LI QMY VGV +P++++ Sbjct: 4 ALLRLGRWGLGTFERLGRGHLFLARLLLGIAALLLRFPLLIAQMYSVGVLTLPIIVVSGA 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L FGAE ++S+ +RE+G +++A++ AGR+GSA+ AEIG MK Sbjct: 64 FVGMVLGLQGYNTLVDFGAEESLGVIVSLSLVRELGPVVSALLFAGRAGSALTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ + M +D +R + +PR +A S+PLL + + ++G V + Sbjct: 124 ATEQLSGMEMMAVDPMRRVAAPRFFAGCFSMPLLAAIFSAVGVLGGYFVGVGLLGVDEGA 183 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ + +I G+IK+ + +A+ EG+ S + + T VV S Sbjct: 184 FWSQMQANTDWEEDILNGVIKSLVFGLVVTWIAVFEGYDTAPTSEGVARATTRTVVHSAF 243 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 AVLALDFVLTALMFG 258 >gi|158337358|ref|YP_001518533.1| hypothetical protein AM1_4236 [Acaryochloris marina MBIC11017] gi|158307599|gb|ABW29216.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 249 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 1/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 I G+ + K + I QM VG + V +L + G V Q A + F Sbjct: 3 AAIFLGGQVVVHLLRGKIHRRNTIEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAF 62 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ +LTAV+I GR SA AEIG+M++ E+IDA++ + D V Sbjct: 63 GLVQTVGGVLALALTRELAPVLTAVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVD 122 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LP+LT+++ + + G +V YDIP++VF HS + +I+ Sbjct: 123 YLVVPRLLACTLMLPILTLISLVAGVTGGMVVASVLYDIPYSVFLDSVHSFLGVWDIWNS 182 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 +IKA I IV G + +G+ T VV ++ +V + + + + + G Sbjct: 183 MIKAAIFGGIIAIVGSSWGLTTYGGAKGVGQSTTAAVVTALVMVFMTNFFLSWVMFQGAG 242 >gi|322515301|ref|ZP_08068298.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] gi|322118677|gb|EFX90889.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] Length = 258 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 122/239 (51%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G +F+ LI+Q+Y +GV + +++L G V+ QG L Sbjct: 19 FGRATFMLFGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLV 78 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 F AE L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D Sbjct: 79 DFAAETSLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDP 138 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 +R +I+PR WA +IS+P+L + I G S+V + + F+S ++ +++ Sbjct: 139 LRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLI 198 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G IK+ A A+ +A+ G+ S + + T VV + +V+ +D + F Sbjct: 199 NGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 257 >gi|320174559|gb|EFW49695.1| Uncharacterized ABC transporter, permease component YrbE [Shigella dysenteriae CDC 74-1112] Length = 260 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRTGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|121998898|ref|YP_001003685.1| hypothetical protein Hhal_2119 [Halorhodospira halophila SL1] gi|121590303|gb|ABM62883.1| protein of unknown function DUF140 [Halorhodospira halophila SL1] Length = 258 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 128/251 (50%), Gaps = 1/251 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + LG + G ++ + LI Q+Y VGV + ++++ + G Sbjct: 7 ALGQRTLTALRGLGEAVLLMGRILRAAPEVVVRPRLLIEQVYAVGVLSLVIILVSALFVG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L+ FGA ++++ +RE+G ++TA++ AGR+GS++ AE+G MK E Sbjct: 67 MVLGLQGYYTLADFGATEAVGTMVALSLVRELGPVVTALLFAGRAGSSLTAEVGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ ++ M +D R +++PR +A ++++PLL + + + G +V I F+S Sbjct: 127 QLSSMEMMAVDPERRILAPRFFAAVLAVPLLAAVFSAVGVFGGYLVAVGMVGIDSGAFWS 186 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + T+ +I G+IK+ +G +A+ +G+ S+ + + T VV + V+ Sbjct: 187 NMQNAVTIQDDILNGVIKSVVFGFLVGWIALHKGYMAEPTSSGVSRATTLGVVHASLAVL 246 Query: 359 IIDSLFAIFYF 369 +D L F Sbjct: 247 GLDFLLTALMF 257 >gi|78184152|ref|YP_376587.1| hypothetical protein Syncc9902_0575 [Synechococcus sp. CC9902] gi|78168446|gb|ABB25543.1| Protein of unknown function DUF140 [Synechococcus sp. CC9902] Length = 249 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L Q+ G + +V +IS G+V Q A +L+ Sbjct: 10 LGSSLLIGGQAVTATMRGRINTVDLSDQLMEAGPGSLLIVFIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLTA ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ AL++ PL A+ I Y+IP +VF++ + ++ Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++ G +G T VV + +V I+D + F Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTKGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248 >gi|84387816|ref|ZP_00990831.1| putative ABC superfamily transport protein [Vibrio splendidus 12B01] gi|84377331|gb|EAP94199.1| putative ABC superfamily transport protein [Vibrio splendidus 12B01] Length = 259 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I + + G + K ++Q+Y VGV + ++++ Sbjct: 4 KAIAGVGKRTLAICESFGRASLMLFGALFGIPRLK-NFPLFVKQLYSVGVQSLAIILVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I GA +V + I Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I IK A + +A+ G+ S + + T VV S Sbjct: 183 SFWSAMQSSVELGRDIGNSTIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 LAVLGLDFVLTALMFG 258 >gi|163732016|ref|ZP_02139462.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149] gi|161394314|gb|EDQ18637.1| hypothetical protein RLO149_01157 [Roseobacter litoralis Och 149] Length = 256 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 108/250 (43%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +G + G+ + + + + Q+ +G +PVV L + TG Sbjct: 7 GRVIMGALAAIGRIAIFGGQCISHLVRPPFYGREFVTQLVNIGWLSLPVVGLTALFTGGA 66 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q S+F AE ++++ +RE+G +L +MIA R S+I AEI +MK+ E+I Sbjct: 67 LALQIYAGGSRFNAESVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 126 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ ++ L PR+ A ++ +PLL + + I G V A + + Sbjct: 127 DALVTLSTHPMKYLTVPRVLAAVLVVPLLVAIGDIIGIFGGYAVATGTLGFNAATYINNT 186 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ + L K ++ G G + +G+ V + +++ + Sbjct: 187 VNFLEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAILILAAN 246 Query: 362 SLFAIFYFAI 371 + +F + Sbjct: 247 FVLTGVFFTL 256 >gi|218710669|ref|YP_002418290.1| ABC transport protein: transmembrane protein (IM) [Vibrio splendidus LGP32] gi|218323688|emb|CAV20020.1| ABC transport protein: transmembrane protein (IM) [Vibrio splendidus LGP32] Length = 261 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I + + G K K L++Q Y VGV + ++++ Sbjct: 6 KTIAGVGKRALAICESFGRASLMLFGALFGIPKLK-NFPLLVKQFYSVGVQSLAIILVSG 64 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 65 LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 124 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I GA +V + I Sbjct: 125 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 184 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 185 SFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 244 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 LAVLGLDFVLTALMFG 260 >gi|261880035|ref|ZP_06006462.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella bergensis DSM 17361] gi|270333275|gb|EFA44061.1| ABC superfamily ATP binding cassette transporter, permease protein [Prevotella bergensis DSM 17361] Length = 252 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 11 LTTFGNYLILMGRAFSRPERMRMFLKRYVKEMAQLGVDSIGIVLLISFFIGAVICIQMKV 70 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 71 NIQSPWMPRWVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 130 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ I+GA + + A + + + Sbjct: 131 GINSASYLILPKIAGLVTIMPFLVIFSSAMGIVGAYATAYIGQLMSPADLTAGMNHSFNE 190 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V+ G++V S +G+ T VV S +++ D Sbjct: 191 WYMWMSIIKSLFFAFIIASVSSYFGYSVKGGSVDVGEASTDAVVSSSVLILFSDVFLTQL 250 Query: 368 YF 369 Sbjct: 251 LS 252 >gi|74313731|ref|YP_312150.1| hypothetical protein SSON_3342 [Shigella sonnei Ss046] gi|73857208|gb|AAZ89915.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 260 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDTIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|37527885|ref|NP_931230.1| hypothetical protein plu4033 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787321|emb|CAE16405.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 260 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + L +Q+Y VGV + ++I+ Sbjct: 4 QALAALGRRAIEVFASFGRAGFMLFRAIIGKPEPARQWPLLRQQLYSVGVRSLLIIIVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE +++I LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILTTYSAEASLGMMVAISLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ I G ++V + I Sbjct: 124 KATEQISSLEMMAVDPLRRVIAPRFWAGFISMPLLSLIFVAVGIWGGAMVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|170078977|ref|YP_001735615.1| ABC-type toluene export system, permease component [Synechococcus sp. PCC 7002] gi|169886646|gb|ACB00360.1| ABC-type toluene export system, permease component [Synechococcus sp. PCC 7002] Length = 259 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 107/221 (48%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 G+ + K + QM G + V+L++F G + Q A +L+ FGAE Sbjct: 21 LMLGQVLWRLLRGKLRRDQITEQMLTAGPKALVPVLLVAFFGGMIFTIQTARELTTFGAE 80 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 F +I RE+ +LTA +IAG+ GSA AE+GSMKI E+IDA+ + + V L+ Sbjct: 81 SFVGGAFAIAFCRELAPILTASIIAGQVGSAFAAELGSMKITEQIDALYMLRSNPVDYLV 140 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 PR+ A + LP+LT+ A +IG + +++YD+ F + + ++ +K Sbjct: 141 MPRVVACCLMLPILTVFALVVGVIGGTGAAYQFYDLAPINFLTSVQTFLQPRDLINVGVK 200 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 +GI+ G + +G+ T+ VV + + Sbjct: 201 GILFGLLVGIIGCSWGLTTVGSTQQVGRSATSAVVTTWIGI 241 >gi|239994339|ref|ZP_04714863.1| putative transport protein (ABC superfamily, membrane) [Alteromonas macleodii ATCC 27126] Length = 258 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 131/257 (50%), Gaps = 2/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + +G + + K + +I+Q+Y VGV + ++++ Sbjct: 2 KFFQSIGAKTIGKVTAVGRAALMLFGALIAVPRLK-NVPLVIKQLYVVGVQSLLIIMVSG 60 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 61 LFIGMVMALQGYTILVDYGAEGSLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 120 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA ++++P+L I+ + I+G +V + + Sbjct: 121 KATEQLSSLEMMAVDPLRRIVAPRFWAGMLAMPMLAIIFSAIGILGGHLVGVDWLGVDAG 180 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S ST ++ G+IK+ A + +A+ +G+ S + K T VV S Sbjct: 181 SYWSIMQSTVDWNQDVINGVIKSLVFALVVTWIAIFKGYDSIPTSEGISKATTETVVYSS 240 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ +D + F I Sbjct: 241 LAVLGLDFVLTALMFGI 257 >gi|116071211|ref|ZP_01468480.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107] gi|116066616|gb|EAU72373.1| hypothetical protein BL107_16235 [Synechococcus sp. BL107] Length = 249 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 114/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L Q+ G + +V++IS G+V Q A +L+ Sbjct: 10 LGASLLIGGQAVTATMRGRINTVELSDQLMEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI LLTA ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILALGLAREIAPLLTACLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ AL++ PL A+ I Y+IP +VF++ + ++ Sbjct: 130 VEYLVVPRLIALVVMAPLQCFFFFIVAVWSGQITSTALYNIPPSVFWTSVRTWMHPEDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++ G +G T VV + +V I+D + F Sbjct: 190 FMLVKAVVFGLIIATISCGWGLTTRGGPKEVGTSTTGAVVMILILVCIMDVVLTQVLFG 248 >gi|317403202|gb|EFV83724.1| membrane protein [Achromobacter xylosoxidans C54] Length = 262 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 128/263 (48%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G + I G +++ +G + + +Q++++G + Sbjct: 6 NAIGALGGWVRTRIAGVGFFTRFFGAMLARSGIALSRP-------RLVSQQIHFIGNYSL 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L+++GAE L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 59 LIIAVSGMFVGFVLGLQGYYTLNRYGAEESLGLLVALSLVRELGPVVTALLFAGRAGTSL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + I+G +V Sbjct: 119 TAEIGLMKAGEQLSAMEVMAVDPMRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + ++ G+IK+ + +VA+ EG+ + + T Sbjct: 179 MIGVDAGAFWSQMQGGVDVWNDVVNGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV V+ +D L F Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261 >gi|327402880|ref|YP_004343718.1| hypothetical protein Fluta_0879 [Fluviicola taffensis DSM 16823] gi|327318388|gb|AEA42880.1| protein of unknown function DUF140 [Fluviicola taffensis DSM 16823] Length = 246 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 1/245 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G + K++ F +M +G+ +P+V L+S GAVIA Q Sbjct: 1 MGIIQNIGKYFMMMYIVFSKPEKWRIFRRRFFEEMEIIGIKSIPIVALMSAFMGAVIALQ 60 Query: 186 GAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A + + + + E + ++++AG+ GS I +E+G+M++ E+IDA+ Sbjct: 61 TASNMDNPLLPAYTVGFITRSSTILEFSPTIISLILAGKVGSNIASEVGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P++ + +I P+L I + ++IG + + + Sbjct: 121 EIMGVNSLSYLVLPKVTSAMIFFPILIIFSIGLSLIGGWLSLQLSGLSSTEEYVYGIRFF 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++I L K A I +A +G+ + +GK T VV + ++I + Sbjct: 181 FKGSDIIYALGKTVVFAFLITSIASFKGYYTKGGALDVGKSSTEAVVSASVAILISNFFL 240 Query: 365 AIFYF 369 + Sbjct: 241 TQMFL 245 >gi|254423355|ref|ZP_05037073.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196190844|gb|EDX85808.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 264 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 1/239 (0%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 I G+ + I QM VG + + ++ S G V Q + FG Sbjct: 20 AILLGGQVIIHVISKPIHRRNTIEQMSAVGPESLLIALVTSVFVGMVFTIQVTREFITFG 79 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A +++I RE+ +LTAV++AGR GSA AEIG+M++ E+IDA++ + D V Sbjct: 80 ATTAIGGVLAITLSRELAPVLTAVVLAGRVGSAFAAEIGTMRVTEQIDALQMLRSDPVDY 139 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A + +P+L +LA + ++G +V Y IPFAVF + + T+ ++ L Sbjct: 140 LVIPRVIACALMVPMLNVLAIITGLLGGLVVATTLYAIPFAVFLNSARNFLTIWDLAASL 199 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 IK+ I ++ G + +G+ TT VV S+ + + + + + + +G Sbjct: 200 IKSLIFGVLIAVIGSSWGLTTTGGAKGVGQSTTTAVVTSLLAIFVSNFFLSWMMFQGMG 258 >gi|237708018|ref|ZP_04538499.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725290|ref|ZP_04555771.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265754195|ref|ZP_06089384.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229436556|gb|EEO46633.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229458004|gb|EEO63725.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234904|gb|EEZ20459.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 251 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 1/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I G A + + F + +M +GV+ + +V+LISF GAVI Q + Sbjct: 12 VGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 71 Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + +++AG+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 72 SPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 131 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I AL+ +P L I + FS IIGA W + + + Sbjct: 132 SAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 191 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 192 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 251 >gi|82778508|ref|YP_404857.1| hypothetical protein SDY_3375 [Shigella dysenteriae Sd197] gi|170765889|ref|ZP_02900700.1| toluene ABC transporter, permease protein [Escherichia albertii TW07627] gi|81242656|gb|ABB63366.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|170125035|gb|EDS93966.1| toluene ABC transporter, permease protein [Escherichia albertii TW07627] Length = 260 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|114564855|ref|YP_752369.1| hypothetical protein Sfri_3703 [Shewanella frigidimarina NCIMB 400] gi|114336148|gb|ABI73530.1| protein of unknown function DUF140 [Shewanella frigidimarina NCIMB 400] Length = 264 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 5/256 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + +GL +S + +I+Q+Y++G + V+I+ + Sbjct: 7 SVSNLGAATRKNIDSIGLATLFLLRIVSSLFTGLVSFKQVIKQIYFIGNRSLIVIIVAAL 66 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG V+A Q L +FG+ +++ ++E+G ++TA+M+ R GSA +EIG M+ Sbjct: 67 FTGMVVALQFYDTLVRFGSVDLLGSAVALSLIKELGPVMTALMVIARVGSATCSEIGIMR 126 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++ DA+ M ++ R ++ PR+ A + +P+LT + + I G IV Sbjct: 127 NEQQFDALDCMAINSYRYVMLPRLLAALFCVPMLTAVFDLVGIGGGYIVGVHIQGESPGA 186 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-----VHSNSLGKKVTTCVV 351 + T + ++ G IK+ I + + GF + + + + T VV Sbjct: 187 YIQGVMDTISFKDVLVGQIKSLVFGLFIMWIPLYYGFYLHLNQKNMGAEGVSNGTTQAVV 246 Query: 352 QSISIVIIIDSLFAIF 367 S I++ D + + Sbjct: 247 MSAIIMLFSDYIVSSL 262 >gi|255530709|ref|YP_003091081.1| hypothetical protein Phep_0797 [Pedobacter heparinus DSM 2366] gi|255343693|gb|ACU03019.1| protein of unknown function DUF140 [Pedobacter heparinus DSM 2366] Length = 269 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 108/231 (46%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 F + L RQ Y +G ++ F+TG V +Q LS+FGA Sbjct: 34 FIARFFKEGFLPPYEARELFRQCYEIGYRSALLISTTGFITGIVFTKQSRPSLSEFGATS 93 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + L+ I LR + LLT ++ AG+ GS+I AE+GSM++ E+IDA+ + + L+S Sbjct: 94 WLPSLVGIALLRTLAPLLTGLIAAGKVGSSIGAELGSMRVTEQIDAMEVSATNPFKFLVS 153 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 R+ A I++P+LT ++GA + + FF T +I +KA Sbjct: 154 TRVLAATITIPILTFYTAMVGMLGALLNVSLSEGTSARAFFQSSLEQITFLDITASTVKA 213 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 IG+V +G+ + +GK + VV ++ ++ I + + F+ Sbjct: 214 ILFGFTIGMVGCYQGYNSSKGTEGVGKAANSAVVIAMFLIFIEEVVSVQFF 264 >gi|15803734|ref|NP_289768.1| hypothetical protein Z4557 [Escherichia coli O157:H7 EDL933] gi|15833327|ref|NP_312100.1| hypothetical protein ECs4073 [Escherichia coli O157:H7 str. Sakai] gi|16131084|ref|NP_417661.1| ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein [Escherichia coli str. K-12 substr. MG1655] gi|24114483|ref|NP_708993.1| integral membrane protein [Shigella flexneri 2a str. 301] gi|26249780|ref|NP_755820.1| hypothetical protein c3954 [Escherichia coli CFT073] gi|30064532|ref|NP_838703.1| integral membrane protein [Shigella flexneri 2a str. 2457T] gi|82545568|ref|YP_409515.1| hypothetical protein SBO_3188 [Shigella boydii Sb227] gi|89109957|ref|AP_003737.1| predicted toluene transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91212619|ref|YP_542605.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89] gi|110643434|ref|YP_671164.1| hypothetical protein ECP_3281 [Escherichia coli 536] gi|110807060|ref|YP_690580.1| integral membrane protein [Shigella flexneri 5 str. 8401] gi|117625486|ref|YP_858809.1| putative toluene transporter subunit: permease component [Escherichia coli APEC O1] gi|157156689|ref|YP_001464672.1| toluene ABC transporter, permease protein [Escherichia coli E24377A] gi|157162678|ref|YP_001459996.1| toluene ABC transporter, permease protein [Escherichia coli HS] gi|168751600|ref|ZP_02776622.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168754176|ref|ZP_02779183.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168763731|ref|ZP_02788738.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168769050|ref|ZP_02794057.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168777249|ref|ZP_02802256.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168781338|ref|ZP_02806345.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168786080|ref|ZP_02811087.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168800908|ref|ZP_02825915.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|170018556|ref|YP_001723510.1| hypothetical protein EcolC_0506 [Escherichia coli ATCC 8739] gi|170082728|ref|YP_001732048.1| toluene ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170684208|ref|YP_001745466.1| toluene ABC transporter permease [Escherichia coli SMS-3-5] gi|187733158|ref|YP_001881891.1| toluene ABC transporter permease [Shigella boydii CDC 3083-94] gi|188492313|ref|ZP_02999583.1| toluene ABC transporter, permease protein [Escherichia coli 53638] gi|191168635|ref|ZP_03030417.1| toluene ABC transporter, permease protein [Escherichia coli B7A] gi|191174475|ref|ZP_03035975.1| toluene ABC transporter, permease protein [Escherichia coli F11] gi|193070286|ref|ZP_03051229.1| toluene ABC transporter, permease protein [Escherichia coli E110019] gi|194429132|ref|ZP_03061662.1| toluene ABC transporter, permease protein [Escherichia coli B171] gi|194434508|ref|ZP_03066768.1| toluene ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194439172|ref|ZP_03071253.1| toluene ABC transporter, permease protein [Escherichia coli 101-1] gi|195940050|ref|ZP_03085432.1| toluene ABC transporter membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208805807|ref|ZP_03248144.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208814152|ref|ZP_03255481.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208818401|ref|ZP_03258721.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209399676|ref|YP_002272664.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209920669|ref|YP_002294753.1| putative ABC transporter permease [Escherichia coli SE11] gi|215488510|ref|YP_002330941.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217327544|ref|ZP_03443627.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218555764|ref|YP_002388677.1| toluene ABC transporter membrane protein [Escherichia coli IAI1] gi|218560264|ref|YP_002393177.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli S88] gi|218691484|ref|YP_002399696.1| toluene ABC transporter membrane protein [Escherichia coli ED1a] gi|218696899|ref|YP_002404566.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli 55989] gi|218701963|ref|YP_002409592.1| toluene ABC transporter membrane protein [Escherichia coli IAI39] gi|218706814|ref|YP_002414333.1| toluene ABC transporter membrane protein [Escherichia coli UMN026] gi|227887915|ref|ZP_04005720.1| ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|237706054|ref|ZP_04536535.1| integral membrane protein [Escherichia sp. 3_2_53FAA] gi|238902296|ref|YP_002928092.1| putative toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|253771972|ref|YP_003034803.1| hypothetical protein ECBD_0548 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038359|ref|ZP_04872417.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43] gi|254163136|ref|YP_003046244.1| putative toluene transporter subunit membrane component of ABC superfamily [Escherichia coli B str. REL606] gi|254795143|ref|YP_003079980.1| putative toluene ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256018887|ref|ZP_05432752.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Shigella sp. D9] gi|256024231|ref|ZP_05438096.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Escherichia sp. 4_1_40B] gi|260846007|ref|YP_003223785.1| putative toluene transporter subunit [Escherichia coli O103:H2 str. 12009] gi|260857321|ref|YP_003231212.1| putative toluene transporter subunit [Escherichia coli O26:H11 str. 11368] gi|260869945|ref|YP_003236347.1| putative toluene transporter subunit [Escherichia coli O111:H- str. 11128] gi|261228205|ref|ZP_05942486.1| predicted toluene transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255061|ref|ZP_05947594.1| putative toluene transporter subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284568|ref|YP_003501386.1| hypothetical protein G2583_3919 [Escherichia coli O55:H7 str. CB9615] gi|293406803|ref|ZP_06650729.1| ABC transporter [Escherichia coli FVEC1412] gi|293412565|ref|ZP_06655288.1| conserved hypothetical protein [Escherichia coli B354] gi|293416623|ref|ZP_06659262.1| inner membrane protein yrbE [Escherichia coli B185] gi|293449527|ref|ZP_06663948.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088] gi|298382544|ref|ZP_06992141.1| ABC transport system permease [Escherichia coli FVEC1302] gi|300817551|ref|ZP_07097767.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1] gi|300823840|ref|ZP_07103964.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7] gi|300897962|ref|ZP_07116338.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1] gi|300904386|ref|ZP_07122234.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1] gi|300918956|ref|ZP_07135511.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1] gi|300926061|ref|ZP_07141883.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1] gi|300929890|ref|ZP_07145332.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1] gi|300938110|ref|ZP_07152884.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1] gi|300948849|ref|ZP_07162914.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1] gi|300955783|ref|ZP_07168125.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1] gi|300979957|ref|ZP_07174809.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1] gi|300990924|ref|ZP_07179376.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1] gi|301022096|ref|ZP_07186022.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1] gi|301025904|ref|ZP_07189391.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1] gi|301047959|ref|ZP_07195004.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1] gi|301306740|ref|ZP_07212794.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1] gi|301326373|ref|ZP_07219737.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1] gi|301644908|ref|ZP_07244877.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1] gi|306816464|ref|ZP_07450596.1| toluene ABC transporter, permease protein [Escherichia coli NC101] gi|307139880|ref|ZP_07499236.1| toluene ABC transporter, permease protein [Escherichia coli H736] gi|307313101|ref|ZP_07592727.1| protein of unknown function DUF140 [Escherichia coli W] gi|309793773|ref|ZP_07688199.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7] gi|312968467|ref|ZP_07782676.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75] gi|312972532|ref|ZP_07786706.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70] gi|331643892|ref|ZP_08345023.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H736] gi|331648994|ref|ZP_08350082.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M605] gi|331654798|ref|ZP_08355798.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M718] gi|331659481|ref|ZP_08360423.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA206] gi|331664807|ref|ZP_08365712.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA143] gi|331670021|ref|ZP_08370866.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA271] gi|331674724|ref|ZP_08375483.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA280] gi|331679273|ref|ZP_08379945.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H591] gi|331684841|ref|ZP_08385433.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H299] gi|54040598|sp|P64607|MLAE_ECOL6 RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54040599|sp|P64608|MLAE_ECO57 RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54040600|sp|P64609|MLAE_SHIFL RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|54042861|sp|P64606|MLAE_ECOLI RecName: Full=Probable phospholipid ABC transporter permease protein mlaE gi|12517809|gb|AAG58328.1|AE005547_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26110208|gb|AAN82394.1|AE016767_154 Hypothetical protein yrbE [Escherichia coli CFT073] gi|606132|gb|AAA57995.1| ORF_f260 [Escherichia coli str. K-12 substr. MG1655] gi|1789585|gb|AAC76226.1| ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein [Escherichia coli str. K-12 substr. MG1655] gi|13363546|dbj|BAB37496.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24053666|gb|AAN44700.1| integral membrane protein [Shigella flexneri 2a str. 301] gi|30042791|gb|AAP18514.1| integral membrane protein [Shigella flexneri 2a str. 2457T] gi|81246979|gb|ABB67687.1| conserved hypothetical protein [Shigella boydii Sb227] gi|85675988|dbj|BAE77238.1| predicted toluene transporter subunit [Escherichia coli str. K12 substr. W3110] gi|91074193|gb|ABE09074.1| hypothetical protein UTI89_C3630 [Escherichia coli UTI89] gi|110345026|gb|ABG71263.1| putative membrane protein [Escherichia coli 536] gi|110616608|gb|ABF05275.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115514610|gb|ABJ02685.1| putative toluene transporter subunit: permease component [Escherichia coli APEC O1] gi|157068358|gb|ABV07613.1| toluene ABC transporter, permease protein [Escherichia coli HS] gi|157078719|gb|ABV18427.1| toluene ABC transporter, permease protein [Escherichia coli E24377A] gi|169753484|gb|ACA76183.1| protein of unknown function DUF140 [Escherichia coli ATCC 8739] gi|169890563|gb|ACB04270.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170521926|gb|ACB20104.1| toluene ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|187430150|gb|ACD09424.1| toluene ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|187767468|gb|EDU31312.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014389|gb|EDU52511.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188487512|gb|EDU62615.1| toluene ABC transporter, permease protein [Escherichia coli 53638] gi|189001139|gb|EDU70125.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189358631|gb|EDU77050.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189361791|gb|EDU80210.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189366134|gb|EDU84550.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189373916|gb|EDU92332.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189376865|gb|EDU95281.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|190901329|gb|EDV61096.1| toluene ABC transporter, permease protein [Escherichia coli B7A] gi|190905230|gb|EDV64869.1| toluene ABC transporter, permease protein [Escherichia coli F11] gi|192956345|gb|EDV86805.1| toluene ABC transporter, permease protein [Escherichia coli E110019] gi|194412857|gb|EDX29149.1| toluene ABC transporter, permease protein [Escherichia coli B171] gi|194417287|gb|EDX33396.1| toluene ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194421868|gb|EDX37874.1| toluene ABC transporter, permease protein [Escherichia coli 101-1] gi|208725608|gb|EDZ75209.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208735429|gb|EDZ84116.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208738524|gb|EDZ86206.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209161076|gb|ACI38509.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209758098|gb|ACI77361.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758100|gb|ACI77362.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758102|gb|ACI77363.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758104|gb|ACI77364.1| hypothetical protein ECs4073 [Escherichia coli] gi|209758106|gb|ACI77365.1| hypothetical protein ECs4073 [Escherichia coli] gi|209913928|dbj|BAG79002.1| putative ABC transporter permease component [Escherichia coli SE11] gi|215266582|emb|CAS11021.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217319911|gb|EEC28336.1| toluene ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218353631|emb|CAU99839.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli 55989] gi|218362532|emb|CAR00156.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli IAI1] gi|218367033|emb|CAR04804.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli S88] gi|218371949|emb|CAR19805.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli IAI39] gi|218429048|emb|CAR09855.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli ED1a] gi|218433911|emb|CAR14828.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli UMN026] gi|222034911|emb|CAP77654.1| UPF0393 inner membrane protein yrbE [Escherichia coli LF82] gi|226839983|gb|EEH72004.1| toluene ABC transporter membrane protein [Escherichia sp. 1_1_43] gi|226899094|gb|EEH85353.1| integral membrane protein [Escherichia sp. 3_2_53FAA] gi|227835311|gb|EEJ45777.1| ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|238863136|gb|ACR65134.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|242378737|emb|CAQ33527.1| MlaE, subunit of phospholipid ABC transporter [Escherichia coli BL21(DE3)] gi|253323016|gb|ACT27618.1| protein of unknown function DUF140 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975037|gb|ACT40708.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli B str. REL606] gi|253979193|gb|ACT44863.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli BL21(DE3)] gi|254594543|gb|ACT73904.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257755970|dbj|BAI27472.1| predicted toluene transporter subunit [Escherichia coli O26:H11 str. 11368] gi|257761154|dbj|BAI32651.1| predicted toluene transporter subunit [Escherichia coli O103:H2 str. 12009] gi|257766301|dbj|BAI37796.1| predicted toluene transporter subunit [Escherichia coli O111:H- str. 11128] gi|260447779|gb|ACX38201.1| protein of unknown function DUF140 [Escherichia coli DH1] gi|281180236|dbj|BAI56566.1| putative ABC transporter permease component [Escherichia coli SE15] gi|281602577|gb|ADA75561.1| inner membrane protein yrbE [Shigella flexneri 2002017] gi|284923216|emb|CBG36310.1| putative organic solvent tolerance protein [Escherichia coli 042] gi|290764441|gb|ADD58402.1| UPF0393 inner membrane protein yrbE [Escherichia coli O55:H7 str. CB9615] gi|291322617|gb|EFE62046.1| UPF0393 inner membrane protein yrbE [Escherichia coli B088] gi|291426809|gb|EFE99841.1| ABC transporter [Escherichia coli FVEC1412] gi|291431979|gb|EFF04962.1| inner membrane protein yrbE [Escherichia coli B185] gi|291469336|gb|EFF11827.1| conserved hypothetical protein [Escherichia coli B354] gi|294493221|gb|ADE91977.1| putative ABC transporter, permease protein [Escherichia coli IHE3034] gi|298277684|gb|EFI19200.1| ABC transport system permease [Escherichia coli FVEC1302] gi|299879926|gb|EFI88137.1| toluene tolerance protein Ttg2B [Escherichia coli MS 196-1] gi|300300191|gb|EFJ56576.1| toluene tolerance protein Ttg2B [Escherichia coli MS 185-1] gi|300307892|gb|EFJ62412.1| toluene tolerance protein Ttg2B [Escherichia coli MS 200-1] gi|300317329|gb|EFJ67113.1| toluene tolerance protein Ttg2B [Escherichia coli MS 175-1] gi|300358310|gb|EFJ74180.1| toluene tolerance protein Ttg2B [Escherichia coli MS 198-1] gi|300397692|gb|EFJ81230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 69-1] gi|300403660|gb|EFJ87198.1| toluene tolerance protein Ttg2B [Escherichia coli MS 84-1] gi|300407000|gb|EFJ90538.1| toluene tolerance protein Ttg2B [Escherichia coli MS 45-1] gi|300413898|gb|EFJ97208.1| toluene tolerance protein Ttg2B [Escherichia coli MS 115-1] gi|300417919|gb|EFK01230.1| toluene tolerance protein Ttg2B [Escherichia coli MS 182-1] gi|300451654|gb|EFK15274.1| toluene tolerance protein Ttg2B [Escherichia coli MS 116-1] gi|300456873|gb|EFK20366.1| toluene tolerance protein Ttg2B [Escherichia coli MS 21-1] gi|300462176|gb|EFK25669.1| toluene tolerance protein Ttg2B [Escherichia coli MS 187-1] gi|300523608|gb|EFK44677.1| toluene tolerance protein Ttg2B [Escherichia coli MS 119-7] gi|300529849|gb|EFK50911.1| toluene tolerance protein Ttg2B [Escherichia coli MS 107-1] gi|300838019|gb|EFK65779.1| toluene tolerance protein Ttg2B [Escherichia coli MS 124-1] gi|300846937|gb|EFK74697.1| toluene tolerance protein Ttg2B [Escherichia coli MS 78-1] gi|301076759|gb|EFK91565.1| toluene tolerance protein Ttg2B [Escherichia coli MS 146-1] gi|305850029|gb|EFM50488.1| toluene ABC transporter, permease protein [Escherichia coli NC101] gi|306907012|gb|EFN37520.1| protein of unknown function DUF140 [Escherichia coli W] gi|307555287|gb|ADN48062.1| toluene ABC transporter [Escherichia coli ABU 83972] gi|307625207|gb|ADN69511.1| toluene ABC transporter, permease protein [Escherichia coli UM146] gi|308122730|gb|EFO59992.1| toluene tolerance protein Ttg2B [Escherichia coli MS 145-7] gi|309703620|emb|CBJ02960.1| putative organic solvent tolerance protein [Escherichia coli ETEC H10407] gi|310334909|gb|EFQ01114.1| toluene tolerance protein Ttg2B [Escherichia coli 1827-70] gi|312286685|gb|EFR14596.1| toluene tolerance protein Ttg2B [Escherichia coli 2362-75] gi|312947751|gb|ADR28578.1| putative toluene transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|313648563|gb|EFS13005.1| toluene tolerance protein Ttg2B [Shigella flexneri 2a str. 2457T] gi|315062500|gb|ADT76827.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli W] gi|315137780|dbj|BAJ44939.1| hypothetical protein ECDH1ME8569_3083 [Escherichia coli DH1] gi|315257122|gb|EFU37090.1| toluene tolerance protein Ttg2B [Escherichia coli MS 85-1] gi|315289007|gb|EFU48405.1| toluene tolerance protein Ttg2B [Escherichia coli MS 110-3] gi|315294854|gb|EFU54193.1| toluene tolerance protein Ttg2B [Escherichia coli MS 153-1] gi|315297940|gb|EFU57210.1| toluene tolerance protein Ttg2B [Escherichia coli MS 16-3] gi|315617277|gb|EFU97886.1| toluene tolerance protein Ttg2B [Escherichia coli 3431] gi|320181469|gb|EFW56387.1| Uncharacterized ABC transporter, permease component YrbE [Shigella boydii ATCC 9905] gi|320186681|gb|EFW61405.1| Uncharacterized ABC transporter, permease component YrbE [Shigella flexneri CDC 796-83] gi|320189547|gb|EFW64206.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. EC1212] gi|320194679|gb|EFW69309.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli WV_060327] gi|320202108|gb|EFW76683.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli EC4100B] gi|320645562|gb|EFX14571.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H- str. 493-89] gi|320650872|gb|EFX19329.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H- str. H 2687] gi|320656253|gb|EFX24165.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661943|gb|EFX29351.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O55:H7 str. USDA 5905] gi|320666778|gb|EFX33757.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. LSU-61] gi|323154409|gb|EFZ40610.1| toluene tolerance protein Ttg2B [Escherichia coli EPECa14] gi|323162886|gb|EFZ48721.1| toluene tolerance protein Ttg2B [Escherichia coli E128010] gi|323165155|gb|EFZ50945.1| toluene tolerance protein Ttg2B [Shigella sonnei 53G] gi|323173546|gb|EFZ59175.1| toluene tolerance protein Ttg2B [Escherichia coli LT-68] gi|323178630|gb|EFZ64206.1| toluene tolerance protein Ttg2B [Escherichia coli 1180] gi|323183148|gb|EFZ68546.1| toluene tolerance protein Ttg2B [Escherichia coli 1357] gi|323189185|gb|EFZ74469.1| toluene tolerance protein Ttg2B [Escherichia coli RN587/1] gi|323376912|gb|ADX49180.1| protein of unknown function DUF140 [Escherichia coli KO11] gi|323936112|gb|EGB32406.1| inner membrane protein yrbE [Escherichia coli E1520] gi|323941706|gb|EGB37885.1| inner membrane protein yrbE [Escherichia coli E482] gi|323946952|gb|EGB42968.1| inner membrane protein yrbE [Escherichia coli H120] gi|323951287|gb|EGB47162.1| inner membrane protein yrbE [Escherichia coli H252] gi|323957659|gb|EGB53373.1| inner membrane protein yrbE [Escherichia coli H263] gi|323961151|gb|EGB56765.1| inner membrane protein yrbE [Escherichia coli H489] gi|323966374|gb|EGB61808.1| inner membrane protein yrbE [Escherichia coli M863] gi|323970243|gb|EGB65514.1| inner membrane protein yrbE [Escherichia coli TA007] gi|323979089|gb|EGB74167.1| inner membrane protein yrbE [Escherichia coli TW10509] gi|324008706|gb|EGB77925.1| toluene tolerance protein Ttg2B [Escherichia coli MS 57-2] gi|324012162|gb|EGB81381.1| toluene tolerance protein Ttg2B [Escherichia coli MS 60-1] gi|324018354|gb|EGB87573.1| toluene tolerance protein Ttg2B [Escherichia coli MS 117-3] gi|324119559|gb|EGC13441.1| inner membrane protein yrbE [Escherichia coli E1167] gi|326337894|gb|EGD61728.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. 1125] gi|326347464|gb|EGD71189.1| Uncharacterized ABC transporter, permease component YrbE [Escherichia coli O157:H7 str. 1044] gi|327251285|gb|EGE62974.1| toluene tolerance protein Ttg2B [Escherichia coli STEC_7v] gi|330909246|gb|EGH37760.1| uncharacterized ABC transporter, permease component YrbE [Escherichia coli AA86] gi|331037363|gb|EGI09587.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H736] gi|331042741|gb|EGI14883.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M605] gi|331048180|gb|EGI20257.1| putative ABC superfamily (membrane) transport protein [Escherichia coli M718] gi|331054063|gb|EGI26092.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA206] gi|331058055|gb|EGI30037.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA143] gi|331062934|gb|EGI34848.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA271] gi|331068163|gb|EGI39559.1| putative ABC superfamily (membrane) transport protein [Escherichia coli TA280] gi|331073338|gb|EGI44661.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H591] gi|331078456|gb|EGI49662.1| putative ABC superfamily (membrane) transport protein [Escherichia coli H299] gi|332086231|gb|EGI91389.1| toluene tolerance protein Ttg2B [Shigella boydii 5216-82] gi|332086452|gb|EGI91599.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 155-74] gi|332090701|gb|EGI95795.1| toluene tolerance protein Ttg2B [Shigella boydii 3594-74] gi|332102327|gb|EGJ05673.1| membrane component of ABC superfamily [Shigella sp. D9] Length = 260 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|260435355|ref|ZP_05789325.1| ABC-type transport system, permease component [Synechococcus sp. WH 8109] gi|260413229|gb|EEX06525.1| ABC-type transport system, permease component [Synechococcus sp. WH 8109] Length = 249 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + L QM G + +V++IS G+V Q A +L+ Sbjct: 10 LGTSLLIGGQAVAATLRGRINRGELFEQMLEAGPGSLLIVLIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ F A+ + Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFFVAVWSGQLTSTALYNIPPAVFWTSVQTWMNPLDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I VA G +G T VV + +V ++D + F Sbjct: 190 FMLVKALVFGLIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248 >gi|254489694|ref|ZP_05102890.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010] gi|224465103|gb|EEF81356.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010] Length = 260 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 1/239 (0%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G +++Q++ VGV + ++++ G V+ QG L Sbjct: 20 GRAHLFLFNMLLGIPGLFLRFSLVVQQLFSVGVLSILIILISGLFVGMVLGLQGYNTLVD 79 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGAE L+S+ +RE+G +++A++ AGR+GSA+ AEIG MK E++ + M +D + Sbjct: 80 FGAEESLGVLVSLSLVRELGPVVSALLFAGRAGSALTAEIGLMKSTEQLSGMEMMAVDPI 139 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIF 311 R +I+PR A II++PLL + + I+G +V + F+S+ + L +I Sbjct: 140 RRIIAPRFLAGIIAMPLLAAIFSAVGILGGFLVGHGLLGVDDGAFWSQMQAKTDLYDDIL 199 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+IK+ + +A+ EG S +G+ T VV S ++ +D + F Sbjct: 200 NGVIKSVVFGFVVTWIALFEGHDATPTSEGVGRATTRTVVHSAFAILGLDFVLTALMFG 258 >gi|196231158|ref|ZP_03130018.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] gi|196224988|gb|EDY19498.1| protein of unknown function DUF140 [Chthoniobacter flavus Ellin428] Length = 264 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 129/255 (50%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + S A +L + G+ + Q GV VP+V L+SF Sbjct: 7 AVRSALQHVSSIAWLLIYTVQEMGDHMLRRRRLPFRPSIFFEQADRTGVGSVPLVALVSF 66 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G +A L+ +G E ++I RE+G L+T +M+A R G+A AE+G+M Sbjct: 67 FLGLTMALLTGHVLAPYGQETLVPAAVAIGFTRELGPLITGIMVAARVGAAFTAELGTMV 126 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE++AI MGL +R+L+SPR+ A + +P L++++N A+ G +++ +DIP Sbjct: 127 VAEEVEAIEAMGLGPLRLLVSPRVLAAFLLMPCLSVVSNMMALSGGALISRWAFDIPMQG 186 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F+ + +I G++K+ IG++A +G V + +G T+ VV +I+ Sbjct: 187 FWQSSLENLFIRDIVAGVLKSFLFGLLIGLIACYKGLTVRGGAAGVGTATTSSVVTAITT 246 Query: 357 VIIIDSLFAIFYFAI 371 VI D++F I A+ Sbjct: 247 VIGFDTVFNIVLVAL 261 >gi|304383590|ref|ZP_07366049.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella marshii DSM 16973] gi|304335114|gb|EFM01385.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella marshii DSM 16973] Length = 261 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + G A + + FL + +M +GV+ + +V+LISF GAVI Sbjct: 16 IKKYLTTLGAYLILMGRAVAKPERMRMFLKRYVAEMSALGVNSIGIVLLISFFIGAVICI 75 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + F + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 76 QMKLNIQSPWMPRFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 135 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I ++ +P L I+++ + I+GA + + + Sbjct: 136 LDIMGVNSACYLILPKIIGMVTIMPFLVIISSATGILGAYATSYIGHVLSPEDLTIGLQH 195 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ +IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 196 QFNPWFVWMSIIKSLFFAFIISSVSSYFGYTVQGGSVEVGKASTDAVVSSSVLILFSDVF 255 Query: 364 FAIFYF 369 Sbjct: 256 LTHLLS 261 >gi|86147572|ref|ZP_01065882.1| putative ABC superfamily transport protein [Vibrio sp. MED222] gi|85834611|gb|EAQ52759.1| putative ABC superfamily transport protein [Vibrio sp. MED222] Length = 259 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I + + G K K L++Q Y VGV + ++++ Sbjct: 4 KTIAGVGKRALAICESFGRASLMLFGALFGIPKLK-NFPLLVKQFYSVGVQSLAIILVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L +GAE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 63 LFIGMVLSLQGYVVLIDYGAEGNLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D ++ +I+PR+WA +IS+PLL ++ I GA +V + I Sbjct: 123 KATEQISSLEMMAVDPLKRIIAPRLWAGLISMPLLAMIFMAVGIWGAQLVGVDWKGIDHG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S+ L +I +IK A + +A+ G+ S + + T VV S Sbjct: 183 SFWSAMQSSVELGRDIGNSMIKCMVFAITVTWIALFNGYDAVPTSEGISQATTRTVVHSS 242 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 243 LAVLGLDFVLTALMFG 258 >gi|220933918|ref|YP_002512817.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] gi|219995228|gb|ACL71830.1| protein of unknown function DUF140 [Thioalkalivibrio sp. HL-EbGR7] Length = 260 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 1/250 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + K + LG S +I+++Y VGV + ++ + Sbjct: 4 GLQKLGHWGLGVLERLGRGHLFLLRVLMSLGTAVTRPRLVIKELYSVGVLSLLIIAVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L FGAE ++++ +RE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 64 FVGMVLGYQGYITLVNFGAEEALGSVVALSLVRELGPVITALLFAGRAGSALSAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ + M +D V+ +I PR A ISLPLL + + A++G + + Sbjct: 124 TTEQLSGMEMMAVDPVKRVILPRFVAAFISLPLLAAIFSAVAVMGGYFIGVGLLGVDGGS 183 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++S+ + ++ G+IK+ + +A+ EG+ S + + T VV S Sbjct: 184 YWSQMQANVDFYEDVMNGIIKSLVFGFVVAWIAVFEGYDTVPTSEGVSRATTRTVVHSAL 243 Query: 356 IVIIIDSLFA 365 V+ +D + Sbjct: 244 AVLALDFILT 253 >gi|320640265|gb|EFX09837.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. G5101] Length = 260 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFAAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|254436878|ref|ZP_05050372.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198252324|gb|EDY76638.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 258 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 110/254 (43%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + +G + + TG+ + + + + +G +PVV L +F Sbjct: 4 ALASLGAAFLGLLAAIGRLATFTGQTISHLVRPPFYGREFATALLQIGYFSLPVVGLTAF 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +MK Sbjct: 64 FTGGALALQIYSGGARFSAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ T+ ++ L PR+ A + +P+L + + I G +V + A Sbjct: 124 VTEQIDALVTLSTHPMKYLTLPRVLAATLVMPILVGVGDIIGIYGGFLVGTERLGFNAAA 183 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + +I + L K ++ G + +G+ + VV + + Sbjct: 184 YLQNTVDFLEPRDIISSLAKGAVFGFIAALMGCYHGMNSERGAMGVGRATKSSVVAAAIL 243 Query: 357 VIIIDSLFAIFYFA 370 ++ + L +F+ Sbjct: 244 ILAANFLLTEAFFS 257 >gi|167838138|ref|ZP_02464997.1| toluene tolerance ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 255 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + V+ + +Q++++G Sbjct: 1 MISAIGRFVIGGLGRTGYATRMFLRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G +++A++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + ++G IV Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYIVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|168022425|ref|XP_001763740.1| ATP-binding cassette transporter, subfamily I, member 14, ABC component protein PpABCI14 [Physcomitrella patens subsp. patens] gi|162684984|gb|EDQ71382.1| ATP-binding cassette transporter, subfamily I, member 14, ABC component protein PpABCI14 [Physcomitrella patens subsp. patens] Length = 263 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 114/237 (48%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 G+ + + + + + ++Q+ VG + V +L + G V Q + ++ Sbjct: 16 AAFIIAGQVIIRTLRGRIHVRNTLQQLELVGPRSLGVSLLTASFVGMVFTIQFVREFARL 75 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+ ++TA+++AGR GSA AE+G+M+++E+ D +R + D V Sbjct: 76 GLTRSVGGVLALALARELSPVVTAIIMAGRVGSAFAAELGTMQVSEQTDTLRVLRTDPVD 135 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L++PR+ A ++LP+LT + A+ + ++ Y++ + ++ + Sbjct: 136 YLVTPRVIACCLALPILTTMCFAVAMAASVLLADSVYNVSANIILESAARALQPWDLIST 195 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I IV+ G + +G+ T+ VV S+ + I D + + +F Sbjct: 196 TIKSVVFGGIISIVSCTWGVTTLGGAKGVGESTTSAVVISLVCIFIADFILSWVFFQ 252 >gi|239814162|ref|YP_002943072.1| hypothetical protein Vapar_1155 [Variovorax paradoxus S110] gi|239800739|gb|ACS17806.1| protein of unknown function DUF140 [Variovorax paradoxus S110] Length = 260 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 117/253 (46%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 S+ LG + + Q++++G + ++ + G Sbjct: 8 DIGFAVRSKLADLGYGAKLFLRLLVQGAQSLQRFGLVRDQIHFLGNYSLAIIAVSGLFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ Q + L ++G+ L+++ +RE+G ++ A++ GR+G+++ AEIG MK E Sbjct: 68 FVLGLQMYYALQRYGSSEALGLLVALSLVRELGPVVAALLFTGRAGTSLTAEIGLMKAGE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M +D V+ +++PR WA +I++PLL + + I+G +V + F+ Sbjct: 128 QLSAMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAVGIMGGYVVGVLMLGVDPGAFWG 187 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + ++ G+IK+ + +A+ +G+ + + T VV + V+ Sbjct: 188 QMQGGVDVWRDVGNGVIKSIVFGFTVTFIALLQGYEAQPTPEGVSRATTRTVVMASLSVL 247 Query: 359 IIDSLFAIFYFAI 371 +D L F+I Sbjct: 248 GLDFLLTAMMFSI 260 >gi|193065385|ref|ZP_03046456.1| toluene ABC transporter, permease protein [Escherichia coli E22] gi|192927026|gb|EDV81649.1| toluene ABC transporter, permease protein [Escherichia coli E22] Length = 260 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLT++ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +++ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGVDFVLTALMFG 259 >gi|94312189|ref|YP_585399.1| hypothetical protein Rmet_3258 [Cupriavidus metallidurans CH34] gi|93356041|gb|ABF10130.1| toluene transporter subunit: membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 258 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 123/252 (48%), Gaps = 1/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG A S + Q+++VG + ++ + G Sbjct: 7 SIGSTVRQFVGGLGHATRMFLTMLALSPALLRRFRLVTDQVFFVGNLSLVIIAVSGLFVG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L++FG+E L+++ +RE+G ++ A++ AGR+G+++ AEIG MK E Sbjct: 67 FVLGLQGYYTLNRFGSEQALGLLVALSLVRELGPVVAALLFAGRAGTSLTAEIGLMKAGE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M ++ ++ +I+PR WA +I++P+L + + ++G +V + + F+S Sbjct: 127 QLSAMEMMAVNPLQRVIAPRFWAGVIAMPVLATIFSALGVLGGYLVGVQLIGVDAGAFWS 186 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + + ++ G+IK+ + +A+ +GF + + T VV + V+ Sbjct: 187 QMQNGVDVRADVLNGVIKSFIFGITVTFIALYQGFEAKPTPEGVSRATTRTVVLASLAVL 246 Query: 359 IIDSLFAIFYFA 370 +D L F+ Sbjct: 247 GLDFLLTALMFS 258 >gi|300728342|ref|ZP_07061707.1| conserved hypothetical protein [Prevotella bryantii B14] gi|299774407|gb|EFI71034.1| conserved hypothetical protein [Prevotella bryantii B14] Length = 252 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 1/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG I G+ + + + + I++M +GV + +V+LISF GAVI Q Sbjct: 10 YLTVLGTYIQLMGKVFSRPERLRMYSKQYIKEMTQLGVDSIGIVLLISFFIGAVICIQMK 69 Query: 188 FQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + + + L E + ++++G+ GS I +E+G+M++ ++IDA+ Sbjct: 70 LNIQSPWMPRWVAGYTTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALDI 129 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I AL+ +P L I ++ I+GA + + + Sbjct: 130 MGVNSASYLILPKIAALVTIMPFLVIFSSAMGIVGAYGTAYIGQILSPEDLTLGIQHSFN 189 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 I+ +IK+ F A I V+ G+ V S +GK TT VV S +++ D Sbjct: 190 QWFIWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKASTTAVVNSSVLILFSDVFLTQ 249 Query: 367 FYF 369 Sbjct: 250 MLS 252 >gi|229496605|ref|ZP_04390319.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] gi|229316502|gb|EEN82421.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC 35406] Length = 256 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 1/249 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +G + + ++ F L+R++ +G+ + +V++ISF G V Sbjct: 7 LGKFTASFRTIGEYTLLMRQVFSRPARWSMFFKQLVREIAKIGLDSILIVMIISFFIGTV 66 Query: 182 IAQQGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q A +S F + L E + +++AG+ GS+I +E+G+M++ E+ Sbjct: 67 ITIQLAINISSPMIPRFTIGYSTREIVLLEFSSSIMCLILAGKIGSSIASELGTMRVTEQ 126 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I L++ +P+L+I++ +AI G + W + F Sbjct: 127 IDALEVMGINSANFLILPKIIGLLLFIPVLSIISMATAIGGGFLATWLTPSLTAEDFEYG 186 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 N+ +IK+ A I + G+ V + +G T VV S ++++ Sbjct: 187 MQLYFNPYNVLYSVIKSLVYAFIITSGSSYFGYNVKGGALGVGVASTNAVVTSSVLILLA 246 Query: 361 DSLFAIFYF 369 D L Sbjct: 247 DVLLTNLLL 255 >gi|160882382|ref|ZP_02063385.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483] gi|237719054|ref|ZP_04549535.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260172011|ref|ZP_05758423.1| hypothetical protein BacD2_09110 [Bacteroides sp. D2] gi|299148138|ref|ZP_07041200.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|315920324|ref|ZP_07916564.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156112195|gb|EDO13940.1| hypothetical protein BACOVA_00331 [Bacteroides ovatus ATCC 8483] gi|229451433|gb|EEO57224.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298512899|gb|EFI36786.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|313694199|gb|EFS31034.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 247 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|91786696|ref|YP_547648.1| hypothetical protein Bpro_0794 [Polaromonas sp. JS666] gi|91695921|gb|ABE42750.1| protein of unknown function DUF140 [Polaromonas sp. JS666] Length = 264 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 126/257 (49%), Gaps = 1/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + SQ LG A + + Q++++G + ++ + Sbjct: 8 RMLSNLGFGTRSQLAELGHAARLMSRLLALTGPALARFGLVRDQIFFLGNYSLAIITVSG 67 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+++ AEIG M Sbjct: 68 LFVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLM 127 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ A+ M +D VR +++PR W +I++PLL + + IIG +V + Sbjct: 128 KAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAAVFSAVGIIGGWVVGVVMIGVDAG 187 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ + + ++ G+IK+ + VA+ +GF + + T VV + Sbjct: 188 SFWSQMQAGVDVWRDVGNGVIKSFVFGVTVTFVALHQGFEAQPTPEGVSRATTRTVVVAS 247 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ +D L + F++ Sbjct: 248 LAVLGLDFLLTAWMFSL 264 >gi|311103421|ref|YP_003976274.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8] gi|310758110|gb|ADP13559.1| toluene tolerance protein Ttg2B [Achromobacter xylosoxidans A8] Length = 262 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G + ++ G +++ +G + + +Q++++G + Sbjct: 6 NAIGALGGWVRTRVSGIGYFTRFFGAMLARSGIALSRP-------RLVSQQVHFIGNYSL 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 59 LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + I+G +V Sbjct: 119 TAEIGLMKAGEQLAAMEVMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGILGGWVVGVL 178 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + + ++ G+IK+ + +VA+ EG+ + + T Sbjct: 179 LIGVDAGAFWSQMQNGVDVWKDVANGVIKSLVFGVTVTLVALYEGWQAKPTPEGVARATT 238 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV V+ +D L F Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261 >gi|294788757|ref|ZP_06753998.1| putative membrane protein [Simonsiella muelleri ATCC 29453] gi|294483239|gb|EFG30925.1| putative membrane protein [Simonsiella muelleri ATCC 29453] Length = 258 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 131/254 (51%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + + ILG + + + +IRQMY+ GV + ++ + Sbjct: 4 IQNIGSKTLTFIQILGANTLFLLKILSLLPQNILRPRLMIRQMYFSGVLSILIIAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QL++F A +++ LRE+G +L A++ A SG A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLAKFKAADVLGFMVAAALLRELGPVLAAILFASSSGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA ++S+PLL + N + I G +V ++ + VF Sbjct: 124 TEQLEAMNVMAINPVARVVAPRFWAGVVSMPLLASIFNVAGIWGGYLVGVQWLGLDSGVF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ T + ++ GLIK+ A+ ++A+ +GF + + + T VV S Sbjct: 184 WSHMQNSMTFSYDVLNGLIKSMIFGTAVSLIAVYQGFHCRPTAEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F FA Sbjct: 244 VLALDFILTAFMFA 257 >gi|260596176|ref|YP_003208747.1| hypothetical protein CTU_03840 [Cronobacter turicensis z3032] gi|260215353|emb|CBA27350.1| UPF0393 inner membrane protein yrbE [Cronobacter turicensis z3032] Length = 262 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + G +F+ L+RQ+Y+VGV + ++I+ Sbjct: 8 LASMGQRGLKFSASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYHVGVLSMIIIIVSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ +GAE L+++ LRE+G ++ A++ AGR+GSA+ AEIG MK Sbjct: 68 IGMVLGLQGYLVLTTYGAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +ISPR WA +ISLPLLT++ + G S+V + I F Sbjct: 128 TEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVNWKGIDAGFF 187 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 188 WSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLA 247 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 248 VLGLDFVLTALMFG 261 >gi|254495378|ref|ZP_05108302.1| ABC transporter, permease protein [Polaribacter sp. MED152] gi|85819732|gb|EAQ40889.1| ABC transporter, permease protein [Polaribacter sp. MED152] Length = 234 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 1/233 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAE 196 + K + F +L++++ +G+ + +++ ISF G VIA Q A L F Sbjct: 1 MLKQVFKRPQKARVFYDALLKEIEELGLKSLGIILFISFFIGGVIALQTALNLDSAFIPR 60 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ Sbjct: 61 SLIGFAAKRSIILEFAPTFCSIILAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNHLV 120 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 P++ A + P L L + G + + + I LIK Sbjct: 121 LPKVIATVFFYPFLITLGMVLGMFGGWLAGVLSGLFSGVNYIEGLQTDFQPFLIVYALIK 180 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A I V G+ V S ++GK T VV + +++I + Sbjct: 181 TLVFAFLIATVPSYHGYYVKGGSIAVGKASTQSVVWTTILIVIANYFLTQMLL 233 >gi|320322486|gb|EFW78579.1| putative ABC transport system permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 265 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 132/255 (51%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVVSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+A QG L+++G+E ++++ LRE+G ++TA++ AGR+GSA+ AEIG+MK Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMK 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V + + Sbjct: 129 STEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWVAIDWLGVYDGS 188 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ + ++ G+IK+ A + +A+ +G+ S + + T VV + Sbjct: 189 FWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISRATTRTVVYASL 248 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 249 AVLGLDFILTALMFG 263 >gi|242241047|ref|YP_002989228.1| hypothetical protein Dd703_3649 [Dickeya dadantii Ech703] gi|242133104|gb|ACS87406.1| protein of unknown function DUF140 [Dickeya dadantii Ech703] Length = 260 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + S G + L RQ+Y VGV + ++I+ Sbjct: 4 QALASLGRSGISTCASFGRAGLMLFNALVGKPEPAKQWPLLARQLYSVGVQSLLIIIVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 CFIGMVLGLQGYIVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA IS+PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ ++K+ F A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQGAVEWRHDVMNCVLKSLFFAMTVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|159476846|ref|XP_001696522.1| lipid transfer machine permease [Chlamydomonas reinhardtii] gi|158282747|gb|EDP08499.1| lipid transfer machine permease [Chlamydomonas reinhardtii] Length = 245 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 115/235 (48%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ +K + Q+ VG + + V +L + G V Q + ++ G Sbjct: 1 MVLGGQVVLRIFKGNIHWKNTAEQLRLVGPASLGVSLLTAGFVGMVFTIQFVREFAKLGL 60 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ RE+ ++TA+++AGR GSA AE+G+M+++E++D++R + D V L Sbjct: 61 TRSVGGVLALALSRELTPVVTAIILAGRVGSAFAAELGTMQVSEQMDSLRVLYTDPVDYL 120 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 ++PR+ A +I+ P+L +L + A + Y++P V T ++ T ++ Sbjct: 121 VTPRVLASMIAGPILNVLCFLMGMGAAVFLADIVYNVPANVIVDSARRALTSYDVMTSMV 180 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ + ++ GF + +G+ T+ VV S+ + I D ++ +F Sbjct: 181 KSWVFGTVVATISCAWGFTTSGGAKGVGESTTSAVVISLVTIFIADFFLSLVFFQ 235 >gi|323143323|ref|ZP_08078012.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066] gi|322416895|gb|EFY07540.1| toluene tolerance protein Ttg2B [Succinatimonas hippei YIT 12066] Length = 257 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + LG FK LI Q+Y+VGV V ++++ Sbjct: 5 ISSLGRYAIRKVTSLGRSTIMLYHALVGKPDFKKHFPLLISQIYFVGVQSVIIILVSGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F A L+++ +RE+G ++TA++ AGR+GSA+ AEIG +K Sbjct: 65 IGMVLGLQGFNILKDFMATGSLGTLVALAIIRELGPVVTALLYAGRAGSALTAEIGQLKA 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +E++ ++ M +D +R +ISPR WA IS+PLL+I+ I G +V + + ++ Sbjct: 125 SEQLSSMEMMAVDPLRRIISPRFWAGAISMPLLSIMFCLVGIYGGKLVGVDWLGLDDGIY 184 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S+ L +I ++K+ A +A+ G+ S+ + T VVQS Sbjct: 185 WSGMQSSVDLVEDIGCMVVKSIVFAIVCTWIALFNGYDCTPTSSGISNATTATVVQSSLA 244 Query: 357 VIIIDSLFAIFYF 369 V+ +D + F Sbjct: 245 VLGLDFVLTALMF 257 >gi|212690525|ref|ZP_03298653.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855] gi|212666874|gb|EEB27446.1| hypothetical protein BACDOR_00007 [Bacteroides dorei DSM 17855] Length = 248 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 1/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I G A + + F + +M +GV+ + +V+LISF GAVI Q + Sbjct: 9 VGKYIMLMGRTFARPERMRMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 68 Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + +++AG+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 69 SPWMPRFVVGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 128 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I AL+ +P L I + FS IIGA W + + + Sbjct: 129 SAGYLILPKIIALMTMIPFLVIFSIFSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 188 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 189 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 248 >gi|281421763|ref|ZP_06252762.1| ABC transporter, permease [Prevotella copri DSM 18205] gi|281404258|gb|EFB34938.1| ABC transporter, permease [Prevotella copri DSM 18205] Length = 248 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL I++M +G+ + +V+LISF GAVI Q Sbjct: 7 LTTFGKYLILMGRSFSRPERMRMFLKQYIKEMSQLGIDSIGIVLLISFFIGAVICIQMKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALDIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ IIGA + + +P + Sbjct: 127 GVNSACYLILPKILGLVTIMPFLVIFSSGMGIIGAYGTAYIGHILPPDDLTLGLQHSFNQ 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFVWMSIIKSLFFAFIISSVSSYFGYTVEGGSVEVGKSSTDAVVCSSVLILFSDVFLTQI 246 Query: 368 YF 369 Sbjct: 247 LS 248 >gi|300865432|ref|ZP_07110232.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336571|emb|CBN55382.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 274 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 1/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 I G+ + + + QM VG + + ++ + G V Q A + Sbjct: 26 AAILLGGQVTLHLFTRTIHRRNTLDQMVAVGPESLLIALVTAGFVGMVFTIQVAREFIAL 85 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G ++++ RE+G +LTAV+IAGR GSA AEIG+M++ E+IDA+ + D + Sbjct: 86 GVTNAVGGVLAVSLARELGPVLTAVIIAGRVGSAFAAEIGTMQVTEQIDALYILKTDPID 145 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LP+LTIL+ + + G ++ + Y +P VF + T +I Sbjct: 146 YLVIPRVIACCLMLPILTILSLVTGMAGGLLIATRMYGVPPVVFLESARNFLTPWDICAP 205 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 IKA I ++ G + +G+ TT VV S+ + I + + + + G Sbjct: 206 AIKAFVFGALIAVIGTSWGLTTTGGAKGVGQSTTTAVVTSMLAIFICNFFLSWLMFQGTG 265 >gi|154494356|ref|ZP_02033676.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC 43184] gi|154085800|gb|EDN84845.1| hypothetical protein PARMER_03711 [Parabacteroides merdae ATCC 43184] Length = 248 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 2/240 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H +G + G+ + ++ F LI+++Y +GV + +V++IS G VIA Q + Sbjct: 4 ALHQVGEYVMLMGKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVVIISIFIGTVIAIQIS 63 Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +S F + L E + ++++AG+ GS I +EIG+M++ E+IDA+ Sbjct: 64 LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTA 305 MG++ LI P++ ++ +P+L I + F+ I+G + A F Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243 >gi|88803715|ref|ZP_01119239.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P] gi|88780448|gb|EAR11629.1| hypothetical protein PI23P_00445 [Polaribacter irgensii 23-P] Length = 246 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 1/245 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G KF F +L++++ +G+ + +++ ISF G VIA Q Sbjct: 1 MTYLEHVGKYFMMLRLVFKRPQKFHIFYTALMKEIEDLGLKSIGIIMFISFFIGGVIALQ 60 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L F + + E +++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNLDSPFIPDSLIGFAAKRSIILEFAPTFCCIILAGKVGSYITSSIGAMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I A + P L ILA I G + + + Sbjct: 121 EVMGINALNFLVLPKILAALFFYPFLIILAMVLGIFGGWLAGVASGLFSGVDYIIGIQTE 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 I +IK + I V G+ V S ++G+ T VV + +++I + + Sbjct: 181 FNSFLIVYAMIKTLVFSFIIATVPAYHGYYVKGGSIAVGRASTQAVVWTTILIVISNYIL 240 Query: 365 AIFYF 369 Sbjct: 241 TQLLL 245 >gi|85058184|ref|YP_453886.1| hypothetical protein SG0206 [Sodalis glossinidius str. 'morsitans'] gi|84778704|dbj|BAE73481.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 260 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I F + H G + L++++Y VGV + ++++ Sbjct: 4 EAIASFGRRGINICHGFGRAGVMLFNALIGKPALREQWPLLVKKLYGVGVLSLVIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYIILTTYSAESSLGMLVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +IS+PLLT + I G ++V ++ I Sbjct: 124 KATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTAIFVAVGIWGGAVVGVEWKGIDSG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S ++ +IK+ A + +A+ G+ S + + T VV + Sbjct: 184 FFWSAMQGAVDWRQDLVNCVIKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|255034005|ref|YP_003084626.1| hypothetical protein Dfer_0190 [Dyadobacter fermentans DSM 18053] gi|254946761|gb|ACT91461.1| protein of unknown function DUF140 [Dyadobacter fermentans DSM 18053] Length = 262 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 111/210 (52%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 + +++Q Y +G + ++ L F+TG V +Q LS+FGA + L++I +R Sbjct: 39 RMEFQEIVKQCYAIGNKSLLLISLTGFITGMVFTKQSRPSLSEFGATSWLPSLVAIAIVR 98 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 + L+TA++ AG+ GS+I AE+GSM++ E+IDA+ ++ + L+ R+ A I++P+ Sbjct: 99 ALAPLVTALISAGKIGSSIGAELGSMRVTEQIDAMEVSAVNPFKFLVVTRVVACTIAIPV 158 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L +++GA + + F FF T +I+T + KA IGIV Sbjct: 159 LMFYCALVSLLGAYLNVTLNEGTSFIAFFENAFEQITFLDIWTSVAKAIAYGFTIGIVGS 218 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +G+ + +GK + VV S+ ++ I Sbjct: 219 YQGYNASKGTEGVGKAANSAVVTSMFLIFI 248 >gi|71909013|ref|YP_286600.1| hypothetical protein Daro_3401 [Dechloromonas aromatica RCB] gi|71848634|gb|AAZ48130.1| Protein of unknown function DUF140 [Dechloromonas aromatica RCB] Length = 263 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 128/253 (50%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + +++ + LG S L +R++Y+ GV + ++++ Sbjct: 8 VRRLGHETVERIWRLGFAARFFWAVLMHSGSSFRRLPLTLREIYFSGVLSLLIIMVSGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L +FG+ L+++ RE+G +L A+ A R+GS++ AEIG MK Sbjct: 68 VGLVLGLQGYEILQRFGSTEALGTLVALSLTRELGPVLAAIFFASRAGSSVTAEIGLMKA 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M ++ + +++PR W +IS+PLL + + ++G ++ + + + Sbjct: 128 TEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAAIFSAMGVLGGWLIGVVFIGVDDGAY 187 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ ++ +I+ G++K+ A+ ++A+ EG+ + + + +T VV S+ Sbjct: 188 WSQMQASVDFRYDIWNGVVKSFVFGIAVSLIAVFEGYDSVPTAEGVSRAITRTVVTSVLT 247 Query: 357 VIIIDSLFAIFYF 369 V+ +D + F F Sbjct: 248 VLALDFVLTSFMF 260 >gi|254294304|ref|YP_003060327.1| hypothetical protein Hbal_1946 [Hirschia baltica ATCC 49814] gi|254042835|gb|ACT59630.1| protein of unknown function DUF140 [Hirschia baltica ATCC 49814] Length = 264 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 118/254 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 A +G + T + +L ++RQ +G +PVV L + G Sbjct: 11 AIGRAVLGTAAEIGRLAIFTARTVWACITPTIYLREVVRQCIQIGFFSLPVVGLTAVFIG 70 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A +A S+F AE F +++ + RE+G +M+AGR G+ I AEIG+M++ E Sbjct: 71 AALALNIYMGGSRFNAEQFVPNIVVLGITRELGPAFAGLMLAGRVGAGIAAEIGAMRVTE 130 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ R L +PR+ A I+LP L ++A+ ++G +V D ++ Sbjct: 131 QIDALHTLSAKPERYLFAPRVIAATITLPALVLIADIIGVMGGWLVSVGALDFNSTIYLR 190 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 T+ ++ +GLIKA I I+ +G + +G+ T VV +++ Sbjct: 191 NTLDFMTINDVLSGLIKAGVFGAIIAIMGCYQGTNSKGGAGGVGRAATLAVVSGAVLILA 250 Query: 360 IDSLFAIFYFAIGI 373 + + + +G+ Sbjct: 251 SNYILTSIFVQVGL 264 >gi|258647414|ref|ZP_05734883.1| ABC transporter, permease [Prevotella tannerae ATCC 51259] gi|260852782|gb|EEX72651.1| ABC transporter, permease [Prevotella tannerae ATCC 51259] Length = 248 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + G I G +++ F +++M +GV + +V+LISF GAVI Sbjct: 3 ILNFLNSFGRYIELLGRTFQRPERWRMFGKQYLKEMAQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + ++++G+ GS I +E+G+M+ ++IDA Sbjct: 63 QIKLNIQSAWMPTWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRTTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +PLL I + S I+GA + + I + Sbjct: 123 LEIMGVNSASFLILPKILGLVTMIPLLVIFSTASGIVGAYATAYIGHIITATDLTAGMQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + G IK+ F A I V+ G+ V S +GK T VV +++ D Sbjct: 183 DFAPWFFWMGTIKSLFFAFIIASVSSFYGYTVEGGSIEVGKASTNAVVSCSMLILFSDLF 242 Query: 364 FAIFYF 369 Sbjct: 243 LTNILS 248 >gi|150003041|ref|YP_001297785.1| hypothetical protein BVU_0448 [Bacteroides vulgatus ATCC 8482] gi|254883679|ref|ZP_05256389.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294775665|ref|ZP_06741173.1| putative membrane protein [Bacteroides vulgatus PC510] gi|149931465|gb|ABR38163.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254836472|gb|EET16781.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294450509|gb|EFG19001.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 255 Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 1/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I G A + F + +M +GV+ + +V+LISF GAVI Q + Sbjct: 16 VGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 75 Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + ++++G+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 76 SPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVN 135 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I AL+ +P L I + S IIGA W + + + Sbjct: 136 SAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 195 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 196 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 255 >gi|325855171|ref|ZP_08171794.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS 18C-A] gi|327312571|ref|YP_004328008.1| hypothetical protein HMPREF9137_0267 [Prevotella denticola F0289] gi|325483908|gb|EGC86852.1| hypothetical protein HMPREF9303_0352 [Prevotella denticola CRIS 18C-A] gi|326944406|gb|AEA20291.1| conserved hypothetical protein [Prevotella denticola F0289] Length = 248 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 7 LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P++ LI +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQV 246 Query: 368 YF 369 Sbjct: 247 LS 248 >gi|254462404|ref|ZP_05075820.1| membrane protein [Rhodobacterales bacterium HTCC2083] gi|206678993|gb|EDZ43480.1| membrane protein [Rhodobacteraceae bacterium HTCC2083] Length = 261 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 106/239 (44%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + ++ +L L + VG +PVV L + TG +A Q ++ Sbjct: 23 GRISIYAFSTLHHIFRRPFYLRELGIAILNVGWLSLPVVGLTAVFTGGALALQIYAGGAR 82 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 F AE +++I +RE+G +L +MIA R S+I AEI +MK+ E+IDA+ T+ + Sbjct: 83 FNAEAVVPQIVAIGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQIDALVTLSTHPM 142 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L PR+ A +I +P+L + + I+G +V + + ++F+ Sbjct: 143 QYLTVPRVLAGLICVPVLVGVGDVIGILGGYLVATGTLEFNSTTYLVNTFDFLEPRDVFS 202 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 L K ++ G G + +G V + +++ + + +F+I Sbjct: 203 SLAKGAVFGTIATLMGCYYGMNSGRGAQGVGAATKGSVEAAAILILAANFVLTGVFFSI 261 >gi|83816537|ref|YP_446599.1| hypothetical protein SRU_2501 [Salinibacter ruber DSM 13855] gi|294508531|ref|YP_003572590.1| Conserved hypothetical protein, membrane, containing DUF140 domain [Salinibacter ruber M8] gi|83757931|gb|ABC46044.1| domain of unknown function superfamily [Salinibacter ruber DSM 13855] gi|294344860|emb|CBH25638.1| Conserved hypothetical protein, membrane, containing DUF140 domain [Salinibacter ruber M8] Length = 250 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 1/238 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 ++ S LG + G AS K + +L QM VG+ +P+V L + TGA Sbjct: 1 MLDALLSPFRALGRYATLMGRAFASIDKVGTYWNNLFIQMVRVGIDSIPIVALAAAFTGA 60 Query: 181 VIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A+QL F + +++ + E+G ++ ++AGR G+ I AE+G+M+++E Sbjct: 61 VFTVQTAYQLETPFIPKTIIGSIVAPSIMLELGAVIAGFILAGRVGARIAAELGTMRVSE 120 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ MGL+ V L+ PR+ A ++ P+L +++ I V + + F Sbjct: 121 QIDALEVMGLNSVGFLVLPRVLAGVLMFPVLYVVSCVVGIGTGIGVGHFGGFLSASEFLE 180 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 L + GLIK+ I +A +G+ G + +G T V S + Sbjct: 181 GARQFFKLLDPTIGLIKSFAFGFIITSIACYKGYYTGGGAVGVGDSTTQAAVLSCVFI 238 >gi|228471177|ref|ZP_04055990.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] gi|228306992|gb|EEK16074.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] Length = 251 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 115/246 (46%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + ++G + K+ F LIR++ G+ + +V++ISF G VI Sbjct: 5 ISNALSVMGEYTLLMAQVFRRPKKWGIFFKQLIREIAKYGLDSIWIVVIISFFIGTVITI 64 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + ++ F + E + +++AG+ GS+I +E+ +M++ E+IDA Sbjct: 65 QLSINMNSPLIPHFTIGYASREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L++ +P+L++++ + ++G + + I + F + Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMSTGLVGGYLATYFIPTITPSDFEMGLQT 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 NIF +IK+ A I A G+ V + +G+ T VV S ++++ D + Sbjct: 185 FFVTRNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVV 244 Query: 364 FAIFYF 369 F Sbjct: 245 LTSLLF 250 >gi|260590590|ref|ZP_05856048.1| ABC transporter, permease [Prevotella veroralis F0319] gi|260537463|gb|EEX20080.1| ABC transporter, permease [Prevotella veroralis F0319] Length = 248 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G + G + + + F +++M +GV + +V+LISF GAVI Q Sbjct: 7 LNTFGNYLMLMGRSLSRPERMRMFFKRYLKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSAWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKILGLMTIMPFLVIFSAATGIIGAYATAYFAHIITPVDLTAGLQHDFNP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246 Query: 368 YF 369 Sbjct: 247 LS 248 >gi|145640771|ref|ZP_01796354.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae R3021] gi|319776661|ref|YP_004139149.1| ABC transporter permease [Haemophilus influenzae F3047] gi|329124179|ref|ZP_08252726.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] gi|145274697|gb|EDK14560.1| hypothetical protein CGSHiR3021_06880 [Haemophilus influenzae 22.4-21] gi|317451252|emb|CBY87486.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae F3047] gi|327467604|gb|EGF13102.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] Length = 261 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 1/256 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I LG + + L++QM+ +GV + +++L Sbjct: 6 ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVGVDWKGVDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ + + +I G IKA F A A+ +A+ G+ S + + T VV + + Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFAIG 372 V+ +D + F G Sbjct: 246 VLGLDFILTAIMFGAG 261 >gi|237809666|ref|YP_002894106.1| hypothetical protein Tola_2931 [Tolumonas auensis DSM 9187] gi|237501927|gb|ACQ94520.1| protein of unknown function DUF140 [Tolumonas auensis DSM 9187] Length = 259 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + + + LI+Q+Y VGV V ++++ Sbjct: 6 ISRLGRRGIQSLTATGRAGIMLYQALVGRPEPRKHFPLLIQQLYVVGVESVLIILVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L FGAE L+++ LRE+G +++A++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGFQGYRVLVDFGAEASLGPLVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R ++SPR WA ISLPLL+++ F IIG +V + F Sbjct: 126 TEQLSSLEMMAVDPLRRIVSPRFWAGAISLPLLSLIFCFIGIIGGKLVGVDWLGADEGGF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ +I G+IK+ A + VA+ G+ + + + T VV + + Sbjct: 186 WSAMQASVDWQEDIVQGIIKSVAFALVVTWVALFNGYDSLPTAAGISQATTRTVVHASLL 245 Query: 357 VIIIDSLFAIFYF 369 V+ +D + F Sbjct: 246 VLGLDFVMTAVMF 258 >gi|319897434|ref|YP_004135631.1| abc-type transport system protein, permease component [Haemophilus influenzae F3031] gi|317432940|emb|CBY81307.1| conserved ABC-type transport system protein,permease component [Haemophilus influenzae F3031] Length = 261 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + + L++QM+ +GV + +++L Sbjct: 6 ISALGKQAIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVGVDWKGVDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ + + +I G IKA F A A+ +A+ G+ S + + T VV + + Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFAIG 372 V+ +D + F G Sbjct: 246 VLGLDFILTAIMFGAG 261 >gi|304413072|ref|ZP_07394545.1| permease component of phospholipid ABC transporter [Candidatus Regiella insecticola LSR1] gi|304283915|gb|EFL92308.1| permease component of phospholipid ABC transporter [Candidatus Regiella insecticola LSR1] Length = 260 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + G + + L++Q++ +G + ++++ Sbjct: 4 KALASLGGKAIDVCTSFGRAGWMLFHALVGKPEPRKQWPLLVKQLHNLGTQSLSIIVVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 LFIGMVLGLQGYLILMTYSAEASLGMMVALSLLRELGPVITALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +I+PR WA +IS+PLL + I+G +IV + I Sbjct: 124 KATEQLASLEMMAIDPLRRVIAPRFWAGVISMPLLMAIFIAVGIVGGAIVGVDWKGIDAG 183 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ LIK+ A+ +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAIEWRVDLINSLIKSLVFTVAVTWIALFNGYDALPTSEGISQATTRTVVYSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTTLMFG 259 >gi|241762837|ref|ZP_04760900.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241368012|gb|EER62217.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 260 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 125/260 (48%), Gaps = 8/260 (3%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G + + + D A + G ++ + Q++++G + ++ Sbjct: 8 DVGLAVRRQLADVGQAARLFGQLVRLFPAAVQRPGLVR-------DQVHFLGNYSLAIIA 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+A QG + L FG+ L+++ LRE+G ++TA++ AGR+G+++ AEI Sbjct: 61 VSGLFVGFVMALQGYYTLQDFGSTEALGQLVALSLLRELGPVITALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G M+ E++ A+ M +D VR ++ PR WA +I++P+L + + ++G +V + Sbjct: 121 GLMRAGEQLSAMEMMAVDPVRRILVPRFWAGVIAMPVLATVFSAVGVMGGWVVAVVMIGL 180 Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ +++ LIK+ + VA+ +G+ + + T VV Sbjct: 181 DGGAFWSQMQGGVDVFSDLGNSLIKSLVFGFTVTFVALLQGYTAKPTPEGVSRATTRTVV 240 Query: 352 QSISIVIIIDSLFAIFYFAI 371 + V+ +D + F+I Sbjct: 241 MASLAVLALDFVLTATMFSI 260 >gi|145630177|ref|ZP_01785959.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae R3021] gi|260581861|ref|ZP_05849657.1| ABC transporter permease [Haemophilus influenzae NT127] gi|144984458|gb|EDJ91881.1| hypothetical protein CGSHi22421_08998 [Haemophilus influenzae R3021] gi|260095054|gb|EEW78946.1| ABC transporter permease [Haemophilus influenzae NT127] Length = 261 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 1/253 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 LG + + L++QM+ +GV + +++L G Sbjct: 9 LGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGM 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 69 VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V + + F+S Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVGVDWKGVDSGSFWSV 188 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ + + +I G IKA F A A+ +A+ G+ S + + T VV + +V+ Sbjct: 189 MQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLVVLG 248 Query: 360 IDSLFAIFYFAIG 372 +D + F G Sbjct: 249 LDFILTAIMFGAG 261 >gi|330432403|gb|AEC17462.1| conserved hypothetical protein [Gallibacterium anatis UMN179] Length = 261 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG +F+ +++Q+Y +GV + +++L Sbjct: 6 IERLGKRGVHWLCTLGKSALMLYGALVGVPQFRKNFPLVVKQLYVLGVQSLLIIVLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVILVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ + M ++ +R +I+PR WA +I++PLL ++ I G S+V + + F Sbjct: 126 TEQLSGLEMMAVNPLRRVIAPRFWAGMIAMPLLALIFTAVGIWGGSLVGVDWKGVDGGSF 185 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S+ +I G+IK+ A ++ +A+ G+ S + + T VVQ+ + Sbjct: 186 WSVMQSSVVWGKDIGNGIIKSLCFALSVVWIALFNGYNALPTSEGISQATTKTVVQASLV 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLALDFILTALMFG 259 >gi|113869373|ref|YP_727862.1| ABC-type transporter, permease component involved in toluene tolerance [Ralstonia eutropha H16] gi|113528149|emb|CAJ94494.1| ABC-type transporter, permease component involved in toluene tolerance [Ralstonia eutropha H16] Length = 259 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 123/253 (48%), Gaps = 1/253 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + LG S + Q+++VG + ++ + Sbjct: 6 ITIGAAVRRSVSGLGRATRMFLTLLGLSPALLRRFRLVTDQVFFVGNLSLVIIAVSGLFV 65 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 66 GFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAG 125 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E++ A+ M ++ ++ +I+PR WA +I++P+L + + I+G +V + + F+ Sbjct: 126 EQLTAMEMMAVNPLQRVIAPRFWAGVIAMPVLAAIFSAVGILGGYVVGVQLIGVDAGAFW 185 Query: 299 SRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S+ + ++ G+IK+ A+ +A+ +GF + + T VV + V Sbjct: 186 SQMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRATTRTVVIASLAV 245 Query: 358 IIIDSLFAIFYFA 370 + +D L F+ Sbjct: 246 LGLDFLLTALMFS 258 >gi|83748206|ref|ZP_00945233.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551] gi|207721840|ref|YP_002252278.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|207744518|ref|YP_002260910.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|300702838|ref|YP_003744439.1| hypothetical protein RCFBP_10489 [Ralstonia solanacearum CFBP2957] gi|83725174|gb|EAP72325.1| toluene tolerance protein TTG2B [Ralstonia solanacearum UW551] gi|206587007|emb|CAQ17591.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum MolK2] gi|206595924|emb|CAQ62851.1| abc-type transport system involved in resistance to organic solvents, permease component protein [Ralstonia solanacearum IPO1609] gi|299070500|emb|CBJ41795.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum CFBP2957] Length = 255 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + LI Q+ ++G ++ + G V+ Sbjct: 9 VRVLISRLGYAARMLMALLGAWRDVLRRPRLLIEQLRFIGNDSFIIIAVSGLFVGFVLGL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+ Sbjct: 69 QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + +++PR W I++PLL + + I+G V + F+S+ + Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGLIGVDPGAFWSQMQAG 188 Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ G+IK+ A+ VA+ +G+ + + T VV + V+ +D + Sbjct: 189 VDVVDDVINGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASLAVLALDFV 248 Query: 364 FAIFYFA 370 F+ Sbjct: 249 LTALMFS 255 >gi|261415260|ref|YP_003248943.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371716|gb|ACX74461.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327576|gb|ADL26777.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 261 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 7/259 (2%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 +G+ + +F+N + + N L + + QM++VG++ +PVV Sbjct: 10 EGLGRAVRRFLNKVVGYVLFIWELFKNIPGAFT-------NLHTTVEQMHHVGITSIPVV 62 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 S TGA+++ Q A+Q +F + + E+ +LTA+++AGR G+++ +E Sbjct: 63 FAASLATGAIMSWQLAYQFGDMIPMMFVGMAVGKSVMVELCPILTAMVLAGRIGASMCSE 122 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M + E++DA + +GL+ + L++PR+ A +I LP+LTIL+ F I+G V Y + Sbjct: 123 LGTMAVTEQLDAYKVLGLNPYKYLLAPRLIATVIMLPVLTILSIFIGIVGGYEVAHLYKE 182 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + ++VFF ++ GLIKA I A GF + +GK VV Sbjct: 183 VSWSVFFYGVRMFYQNWDLVVGLIKATLYGFFISSYACFFGFFTHSGAEGVGKSTKATVV 242 Query: 352 QSISIVIIIDSLFAIFYFA 370 ++ ++I + Sbjct: 243 AGMTSILIGGFTLSKLLLV 261 >gi|159044922|ref|YP_001533716.1| hypothetical protein Dshi_2379 [Dinoroseobacter shibae DFL 12] gi|157912682|gb|ABV94115.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 258 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 110/255 (43%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + I G G + + + + + +G +PVV L + Sbjct: 3 RLIAAIGASVLGILGAAGRFAIFVGAAFSHMVRPPFYWREFGQALLNIGYFSLPVVGLTA 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F TG +A Q ++F AE +++I +RE+G +L +MIA R S+I AEI +M Sbjct: 63 FFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAARVTSSIAAEIATM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K+ E+IDA+ T+ ++ L +PR+ A I+ +PLL + + I+G +V A Sbjct: 123 KVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGYLVSTSRLGFNPA 182 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + L +I + L K ++ G G + +G + VV + Sbjct: 183 TYLQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGVGAATKSSVVAAAV 242 Query: 356 IVIIIDSLFAIFYFA 370 +++ + + +F+ Sbjct: 243 LILAANYMLTELFFS 257 >gi|283788167|ref|YP_003368032.1| putative organic solvent tolerance protein [Citrobacter rodentium ICC168] gi|282951621|emb|CBG91321.1| putative organic solvent tolerance protein [Citrobacter rodentium ICC168] Length = 260 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALATLGHKGIKTVSTFGRAGLMLFNALVGKPEFRKHTPLLVRQLYNVGVLSMLIILVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|253995674|ref|YP_003047738.1| hypothetical protein Mmol_0301 [Methylotenera mobilis JLW8] gi|253982353|gb|ACT47211.1| protein of unknown function DUF140 [Methylotenera mobilis JLW8] Length = 267 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 130/257 (50%), Gaps = 1/257 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + N ++ LG A S + +R++Y+ GV + ++I+ + Sbjct: 11 RFLSGVGNRMIARIWRLGAGARLFMLAIAYSGESFRRFHLTLREVYFTGVMSLLIIIVSA 70 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F G V+A QG L ++G+ L+++ +RE+G ++TA++ AGR+G+AI AEIG M Sbjct: 71 FFVGMVLALQGYNTLQKYGSSEAIGVLVALALVRELGPVVTALLFAGRAGTAITAEIGLM 130 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ A+ M ++ + +++PR WA +IS+P+L L + ++G +V + Sbjct: 131 KTTEQLSAMEMMAVNPIARVVAPRFWAGVISMPILAALFSMVGVLGGYLVAVPLIGVDDG 190 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ + + +I G+IK+ A ++A+ EGF + + T VV S Sbjct: 191 AFWSQMQANVDVRADIINGVIKSVVFGVACTMIALFEGFDAPPTAEGVSHATTRTVVISS 250 Query: 355 SIVIIIDSLFAIFYFAI 371 V+ +D + F + Sbjct: 251 LTVLFLDFVLTSFMLVV 267 >gi|332177068|gb|AEE12758.1| protein of unknown function DUF140 [Porphyromonas asaccharolytica DSM 20707] Length = 251 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + ++G + K+ F LIR+M G+ + +V++ISF G VI Sbjct: 5 IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +S F + E + +++AG+ GS+I +E+ +M++ E+IDA Sbjct: 65 QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L++ +P+L++++ + ++G + + I + F + Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + NIF +IK+ A I A G+ V + +G+ T VV S ++++ D + Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVV 244 Query: 364 FAIFYF 369 F Sbjct: 245 LTSLLF 250 >gi|319642184|ref|ZP_07996844.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A] gi|317386170|gb|EFV67089.1| hypothetical protein HMPREF9011_02444 [Bacteroides sp. 3_1_40A] Length = 251 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 1/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G I G A + F + +M +GV+ + +V+LISF GAVI Q + Sbjct: 12 VGKYIMLMGRTFARPERMHMFFKQYLNEMVQLGVNSIGIVLLISFFIGAVITIQIKLNIE 71 Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + ++++G+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 72 SPWMPRFVVGYTTREIMLLEFSSSIMCLILSGKVGSNIASEIGTMRVTQQIDALEIMGVN 131 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I AL+ +P L I + S IIGA W + + + Sbjct: 132 SAGYLILPKIIALMTMIPFLVIFSISSGIIGAFCTCWFGGVMNAEDLAYGLQYSFQEWFV 191 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 192 WCSFIKSIFFAFIISSVSAYFGYTVEGGSIAVGKASTDSVVMSSVLILFSDLVLTQLLMG 251 >gi|251793143|ref|YP_003007871.1| ABC transporter permease [Aggregatibacter aphrophilus NJ8700] gi|247534538|gb|ACS97784.1| conserved ABC-type transport system protein, permease component [Aggregatibacter aphrophilus NJ8700] Length = 261 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 N +G+ + F LG + I+Q++ +GV Sbjct: 2 LVNFISALGRNTINFGRA-------LGRAGFLLFGALVGKPQVSKHFPLFIKQLHVLGVQ 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++L G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GS Sbjct: 55 SLLIIMLSGLFIGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGS 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ ++ M +D +R +I+PR WA II++P+L+I+ I G S+V Sbjct: 115 ALTAEIGLMKATEQLSSLEMMAVDPLRRVIAPRFWAGIIAMPILSIIFIAIGIWGGSLVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S ++ T +I G IK+ F A A+ +A+ G+ S + K Sbjct: 175 VDWKGVDAGSFWSVMQNSVTWGHDILNGSIKSLFFAIAVVWIALFNGYDCIPTSEGISKA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 235 TTRTVVHASLVVLGLDFVLTAIMFG 259 >gi|188997595|ref|YP_001931846.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp. YO3AOP1] gi|188932662|gb|ACD67292.1| protein of unknown function DUF140 [Sulfurihydrogenibium sp. YO3AOP1] Length = 247 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 1/241 (0%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S G + S KF + +++ M +GV+ P+++L F TG V+ + Sbjct: 6 SLIEHTGNITIFFLRTLLSFKKFP-KIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVET 64 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+IDA+ Sbjct: 65 YPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEV 124 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 M +D +R L++PRI I+ +P LT+L+ S +IG Y I +++ + Sbjct: 125 MAVDPMRYLVAPRIITAILMVPFLTVLSYTSGVIGGYFTSVYVYGINEYMYWEKLKDFTE 184 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +I GL K+ + + G+ + +G+ TT VV + +++I+D Sbjct: 185 LKDIMGGLYKSAVFGVILVTITAYFGYITKGGAEGVGRSTTTAVVVASVVILILDYFLTA 244 Query: 367 F 367 Sbjct: 245 L 245 >gi|218550477|ref|YP_002384268.1| toluene ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218358018|emb|CAQ90664.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324115202|gb|EGC09166.1| inner membrane protein yrbE [Escherichia fergusonii B253] gi|325498775|gb|EGC96634.1| toluene transporter subunit: membrane component of ABC superfamily [Escherichia fergusonii ECD227] Length = 260 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + F + G +F+ LIRQ+Y VGV + ++I+ Sbjct: 5 ALAAFGRKGITTLRTFGRAGLMLFNAIVGKPEFRKHTPLLIRQIYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|281425287|ref|ZP_06256200.1| hypothetical protein HMPREF0971_02259 [Prevotella oris F0302] gi|299141487|ref|ZP_07034623.1| ABC transporter, permease [Prevotella oris C735] gi|281400580|gb|EFB31411.1| ABC transporter, permease [Prevotella oris F0302] gi|298576823|gb|EFI48693.1| ABC transporter, permease [Prevotella oris C735] Length = 252 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 1/249 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 G + G A + + F +++M +GV + +V+LISF GAV Sbjct: 4 FKLFYKYLTTFGSYLLLMGRSIAVPERMRMFFKRYVKEMSQLGVDSIGIVLLISFFIGAV 63 Query: 182 IAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + + + L E + +++AG+ GS I +E+G+M++ ++ Sbjct: 64 ICIQMKVNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 123 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I L+ +P L + ++ I+GA + + + Sbjct: 124 IDALDIMGVNSANYLILPKILGLVTMMPFLVVFSSALGILGAYSTAYIGHMLSPDDLTLG 183 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + I+ +IK+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 184 IQHSFNAWFIWMSIIKSMFFAFVIASVSSFFGYTVEGGSVEVGKASTDAVVSSSVLILFS 243 Query: 361 DSLFAIFYF 369 D Sbjct: 244 DVFLTQLLS 252 >gi|288803886|ref|ZP_06409311.1| ABC transporter, permease [Prevotella melaninogenica D18] gi|302345895|ref|YP_003814248.1| hypothetical protein HMPREF0659_A6184 [Prevotella melaninogenica ATCC 25845] gi|288333651|gb|EFC72101.1| ABC transporter, permease [Prevotella melaninogenica D18] gi|302149082|gb|ADK95344.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 248 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 7 LTTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I LI +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKIMGLITIMPFLVIFSAATGIIGAYATAYLAHIITPVDLTAGLQHDFNP 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQM 246 Query: 368 YF 369 Sbjct: 247 LS 248 >gi|295097681|emb|CBK86771.1| conserved hypothetical integral membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 260 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAGLGHRGLKTISTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G ++V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGALVGVNWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|302877779|ref|YP_003846343.1| hypothetical protein Galf_0536 [Gallionella capsiferriformans ES-2] gi|302580568|gb|ADL54579.1| protein of unknown function DUF140 [Gallionella capsiferriformans ES-2] Length = 262 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 8/265 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + IG +IV + A L + +G + +I++++ GV Sbjct: 2 AVVKTISAIGHRIVDTVWRIGVAARFFFLTLLYSGNCLRRFH-------LVIKELFSTGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++I+ G V+ QG L ++G+E ++++ +RE+G ++ A++ A R+G Sbjct: 55 MSLIIIIVAGLFVGMVLGLQGYETLKRYGSESALGVMVALGLVRELGPVMAALLFASRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I A+ M ++ + +++PR WA +IS+PLL L + I G +V Sbjct: 115 SAMTAEIGLMKATEQISAMEMMAVNPIARIVAPRFWAGVISMPLLAALFSAVGIFGGYLV 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+S+ + +I G+IK+ + ++A+ EGF + + Sbjct: 175 GVVQIGVDEGSFWSQMQAAVDFREDIMNGIIKSVVFGTVVTVIALFEGFDAPPTAEGVSG 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYF 369 T VV S ++++D + F Sbjct: 235 ATTRTVVTSSLAILMLDFVLTAIMF 259 >gi|30250308|ref|NP_842378.1| hypothetical protein NE2383 [Nitrosomonas europaea ATCC 19718] gi|30181103|emb|CAD86295.1| Domain of unknown function DUF140 [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + + IG ++ I + LV+ + + + R++Y+ Sbjct: 7 LAKRIRTIIESIGHRVADSIWRLGCATRFVLLVLLKSLPSFLRFH-------LITREIYF 59 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 GV + ++++ G V+ QG L +FG+E L+++ +RE+G ++ A++ A Sbjct: 60 AGVLSLIIILVSGLFVGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFAS 119 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R+GSA+ AEIG MK E++ A+ M +D + +++PR W + S+PLL + + + G Sbjct: 120 RAGSAMTAEIGLMKATEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGG 179 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 +V + + F+S+ ++ +I G+IK+ F + +A+ EGF + Sbjct: 180 YLVTVVFIGVDEGSFWSQMQNSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEG 239 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV S ++ +D + F F Sbjct: 240 VSGATTRTVVTSSLAILGLDFVLTAFMF 267 >gi|16273014|ref|NP_439243.1| ABC transporter permease [Haemophilus influenzae Rd KW20] gi|260580171|ref|ZP_05848001.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1176838|sp|P45030|Y1086_HAEIN RecName: Full=Probable ABC transporter permease protein HI_1086 gi|1574640|gb|AAC22742.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|260093455|gb|EEW77388.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 261 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 1/256 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I LG + + L++QM+ +GV + +++L Sbjct: 6 ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLIDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPVLSILFIAIGIWGGSLVGVDWKGVDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ + + +I G IKA F A A+ +A+ G+ S + + T VV + + Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFAIG 372 V+ +D + F G Sbjct: 246 VLGLDFILTAIMFGAG 261 >gi|226305212|ref|YP_002765170.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229490705|ref|ZP_04384543.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226184327|dbj|BAH32431.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229322525|gb|EEN88308.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 264 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 117/252 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 ++ G ++ + ++++ I Q +++ + L++ G Sbjct: 7 SVLSPVNGALTQAGNIVELFVDVVRNTFRRPFQFREFIEQAWFIASVTILPTALVAIPFG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV++ Q + Q GAE F+ + +++ L+TA+++AG +GSA+ A++GS I E Sbjct: 67 AVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLGSRTIRE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +G++ ++ L+ PR+ A+++ LL L + I G + S Sbjct: 127 EIDAMEVLGINPIQRLVVPRVLAMVLIAVLLNGLVSVVGIAGGYFFNVILQGGNPGAYIS 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F + A L +I++G IKA G+++ +G +G+ V VV + ++ Sbjct: 187 SFSAFAQLPDIWSGEIKAAVFGVIAGVISAYKGLHPSGGPKGVGEAVNQAVVITFLLLFF 246 Query: 360 IDSLFAIFYFAI 371 + + + Y I Sbjct: 247 ANLILTMVYLQI 258 >gi|325266930|ref|ZP_08133601.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] gi|324981671|gb|EGC17312.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] Length = 257 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + LG + + + +RQMY+ GV V ++ + Sbjct: 4 IQNIGAKTIAFIQALGATVLFLLNILMLLPQSLFRMRLTVRQMYFSGVMSVLIIAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G VI QG QL++F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA ++S+PLL + N + I G +V ++ + VF Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVLSMPLLACIFNVAGIYGGYLVGVQWLGLDSGVF 183 Query: 298 FSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + + ++ GL+K+ A+ ++A+ +GF + + + T VV S Sbjct: 184 WSNMQNNIDVVYDVGNGLLKSLIFGTAVSLIAVYQGFHCTPTAEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 V+ +D + F F Sbjct: 244 VLALDFILTAFMF 256 >gi|206890031|ref|YP_002249467.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741969|gb|ACI21026.1| toluene tolerance protein Ttg2B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 258 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 1/237 (0%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 ++ + ++ QM Y G S V +V L+ G ++ Q + +LS G + Sbjct: 19 ILCVNSIIRLFRKPLYFDDIVEQMEYAGSSSVFIVSLVCLFVGMALSLQLSAELSGLGLK 78 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 +++ ++ I +REIG L+TA++ GR G+ AEIGSM + +ID +R G+D ++ ++ Sbjct: 79 MYTGKIVGIAVIREIGPLVTALVFIGRVGAGQTAEIGSMILGHQIDTLRVYGIDPIKKVV 138 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 PR+ A ++ LP LTI+ + + G + + + ++S T N+ +G IK Sbjct: 139 VPRVVASVVMLPCLTIIGDLVCLFGGYYIAVFVSNQSGSFYWSSIIKELTFQNVLSGSIK 198 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 I ++ G + L T VV SI +VI +D + I +A+G Sbjct: 199 PFIFGYLISCISCFYGLTTRGGAKGLRTSTTKAVVTSIVVVIAMDFVLTRILLYALG 255 >gi|299137710|ref|ZP_07030891.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] gi|298600351|gb|EFI56508.1| protein of unknown function DUF140 [Acidobacterium sp. MP5ACTX8] Length = 256 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 107/237 (45%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + + S + RQ+ G + ++++ F GAV+ Sbjct: 7 LFEFVGKLGLFSLRVVGDSLRPPFEFAQFFRQVAEAGNKSLILIVVSGFALGAVMTLHTR 66 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L FGA + ++ EIG L+ +++AGR GS I A + +M+ E+IDAI ++ Sbjct: 67 STLVMFGATAMIPAVQAVAFFVEIGPLVAGLLLAGRVGSGIGAVLANMRATEQIDAIESL 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 +D + L+ PR+ A ++ LP+LT+ +F+ ++G + I ++ +R Sbjct: 127 SIDSFKFLVVPRVLACVVVLPILTLFMDFAGLLGGFLSEGLTSHIGPTLYVNRAFDYIQW 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +N +K IG V+ G+ + +G+ T VV S ++I+ D L Sbjct: 187 SNFIAPTLKTTVFGFIIGSVSSYFGYTTDKGAKGVGEAATNSVVLSSLLIIVADVLL 243 >gi|330721190|gb|EGG99301.1| Uncharacterized ABC transporter2C permease component YrbE [gamma proteobacterium IMCC2047] Length = 225 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 125/223 (56%), Gaps = 1/223 (0%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + L L++Q+Y VGV +P++I+ G V++ QG L +G+E ++S+ + Sbjct: 1 MRKGLPLLLKQLYAVGVLSLPIIIVSGLFIGMVMSLQGYSILVDYGSEQAVGQMVSLSLV 60 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 RE+G ++TA++ AGR+GS++ AEIG MK E+I ++ +G+D +R +++PR+ A I+LP Sbjct: 61 RELGPVVTALLFAGRAGSSLTAEIGLMKATEQITSLEMLGVDPLRYVMAPRLLAGFIALP 120 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIV 327 LLT++ N I G ++V + + F++ + ++ G++K+ A + + Sbjct: 121 LLTLIFNVVGIWGGALVAVDWLGVYDGSFWANMQAATDFRTDVVNGMVKSIAFAFVVTWI 180 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A+ +G + S +G+ T VV S V+ +D + F Sbjct: 181 AVFQGHDLTPTSEGIGRATTKTVVYSSLAVLGLDFVLTAVMFG 223 >gi|251791365|ref|YP_003006086.1| hypothetical protein Dd1591_3807 [Dickeya zeae Ech1591] gi|247539986|gb|ACT08607.1| protein of unknown function DUF140 [Dickeya zeae Ech1591] Length = 260 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + G + L +Q+Y VGV + ++++ Sbjct: 4 QALASLGRVGIQVCAAFGRAGLMLFNALVGKPEPARQWPLLRKQLYSVGVQSLLIIMVSG 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 64 VFIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ M +D +R +++PR WA +I++PLLT++ I G ++V + I Sbjct: 124 KATEQLSSMEMMAVDPLRRVVAPRFWAGVITMPLLTVIFVAVGIWGGALVGVDWKGIDSG 183 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S + ++ ++K+ A + +A+ G+ S + + T VV S Sbjct: 184 FFWSAMQNAVAWQKDLLNCVLKSLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSS 243 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 244 LAVLGLDFVLTALMFG 259 >gi|193213347|ref|YP_001999300.1| hypothetical protein Cpar_1708 [Chlorobaculum parvum NCIB 8327] gi|193086824|gb|ACF12100.1| protein of unknown function DUF140 [Chlorobaculum parvum NCIB 8327] Length = 265 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 121/258 (46%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG + + + ++ K K + ++ Q GV +P Sbjct: 2 PLTLIGNFVDSKVLQLKELLLTMQEFFYFALRAFSTLPKAKRYWRDVLDQALICGVESIP 61 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V++ S GA+++ + L +FGA+ S LRE+G LL +M++ R GS Sbjct: 62 IVLVSSISIGALMSMEVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGSRNG 121 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M+I+E+IDA+R G D + L+ PR+ A +I L L++F+ + A++V Y Sbjct: 122 AELGAMQISEQIDALRAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTAALVAQFY 181 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + + +F++ + + +KAP A I +V+ GF+ + +G+ Sbjct: 182 HKLDPGIFWNSIYPRLLPKDFVVSFLKAPVFAIIITLVSSFNGFSAHGGTAGVGRSTIKG 241 Query: 350 VVQSISIVIIIDSLFAIF 367 +V S +V++ + + Sbjct: 242 IVASSGLVLVANFYVSKI 259 >gi|255067843|ref|ZP_05319698.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca ATCC 29256] gi|255047934|gb|EET43398.1| toluene tolerance ABC efflux transporter, permease [Neisseria sicca ATCC 29256] Length = 258 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVTWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ ID + F Sbjct: 244 ILAIDFVLTALMF 256 >gi|261364829|ref|ZP_05977712.1| toluene tolerance ABC efflux transporter, permease [Neisseria mucosa ATCC 25996] gi|288566867|gb|EFC88427.1| toluene tolerance ABC efflux transporter, permease [Neisseria mucosa ATCC 25996] Length = 258 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVTWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ ID + F Sbjct: 244 ILAIDFVLTALMF 256 >gi|114330858|ref|YP_747080.1| hypothetical protein Neut_0852 [Nitrosomonas eutropha C91] gi|114307872|gb|ABI59115.1| protein of unknown function DUF140 [Nitrosomonas eutropha C91] Length = 265 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG S + R++YY GV + ++++ Sbjct: 9 IESIGHRMVDSIWRLGCATHFMLLVLLKSVPGFLRFRLITREIYYAGVMSLIIILVSGLF 68 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L +FG+E L+++ +RE+G ++ A++ A R+GSA+ AEIG MK Sbjct: 69 VGMVLGLQGYETLQKFGSESAVGTLVALSLVRELGPVIAALLFASRAGSAMTAEIGLMKA 128 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M +D + +++PR W + S+PLL + + + G +V + + F Sbjct: 129 TEQLAAMGMMAVDPIARIVAPRFWGGVFSMPLLAAMFSVMGVFGGYLVTVIFIGVDEGSF 188 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ S+ +I G+IK+ F + +A+ EGF + + T VV S Sbjct: 189 WSQMQSSVDFRYDIVNGVIKSCFFGVVVTAIAVFEGFDAPPTAEGVSGATTRTVVTSALA 248 Query: 357 VIIIDSLFAIFYF 369 ++ +D + F F Sbjct: 249 ILGLDFVLTAFMF 261 >gi|296104907|ref|YP_003615053.1| putative ABC transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059366|gb|ADF64104.1| putative ABC transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAIDLRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|293391911|ref|ZP_06636245.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952445|gb|EFE02564.1| conserved ABC-type transport system protein, permease component [Aggregatibacter actinomycetemcomitans D7S-1] Length = 261 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 129/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I ++ + A +G + LI+Q++ +GV + +++L Sbjct: 6 ISALGRNAINFARAMGRAGFLLFGALIGKPQINKHFPLLIKQLHVLGVQSLLIIMLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+ R WA +I++P+L+I+ I G S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIASRFWAGVIAMPILSIIFIAIGIWGGSLVGVDWKGVDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S S+ T + +I G IK+ F A A+ +A+ G+ S + K T VV + + Sbjct: 186 WSVMQSSVTWSHDILNGFIKSLFFAIAVVWIALFNGYDCIPTSEGISKATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTTIMFG 259 >gi|261342639|ref|ZP_05970497.1| toluene tolerance ABC efflux transporter, permease [Enterobacter cancerogenus ATCC 35316] gi|288315287|gb|EFC54225.1| toluene tolerance ABC efflux transporter, permease [Enterobacter cancerogenus ATCC 35316] Length = 260 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTIRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMVIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTIL I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGSLVGVHWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S L ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAIDLRMDLINCLIKSLVFAVTVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|255534289|ref|YP_003094660.1| ABC-type transport system involved in resistance to organic solvents, permease component [Flavobacteriaceae bacterium 3519-10] gi|255340485|gb|ACU06598.1| ABC-type transport system involved in resistance to organic solvents, permease component [Flavobacteriaceae bacterium 3519-10] Length = 250 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 3/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G + K F +R+++ +GV+ +V+ S GAV+A Sbjct: 2 FKNLLSQIGAYFLLLSKTMKRPQKSSVFGKLFMREIHDLGVNSFGLVLFTSTFVGAVVAI 61 Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q S F ++ + E + +V++AG+ GS I + IG+M++ E+I Sbjct: 62 QMFNNFSASSFPIPNSFIGYATKVVLILEFAPTIISVILAGKVGSYIASSIGTMRVTEQI 121 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ LI P+I A II PLL ++ I G + A + + Sbjct: 122 DALDIMGVNSPNFLILPKILASIIFNPLLIAISIVFGIWGGYLAGIATGSWSKADYITGI 181 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ K A I V G+ V S +G+ T VV +I +II + Sbjct: 182 QMYMPQHFIWYAFFKTAVFAFLIATVPAYFGYNVKGGSLEVGRASTQAVVWTIVAIIITN 241 Query: 362 SLFAIFYFA 370 + + + Sbjct: 242 LILTQMFLS 250 >gi|330991409|ref|ZP_08315360.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] gi|329761428|gb|EGG77921.1| putative ABC transporter permease protein [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 120/253 (47%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + G V + + + L + +G +PVV L + Sbjct: 8 VAGLGRAVLDIVRMAGKVALFAARALSHVVRPPFYWRILWGTLVEIGFFSLPVVALTALF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+A+ AEIG+M++ Sbjct: 68 SGGVIALQSYTGFAQYHAQNAIAGIVILAVTRELGPVLAGLMVAGRVGAAMSAEIGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ + ++ L++PR+ A ++LP L ++A+ ++G V D + + Sbjct: 128 TDQIDALSTLSTNPMKYLVTPRLVAGTLALPFLVLVADILGVLGGFTVCVMKLDFSPSAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ + ++ GL+KA I ++ G+ + +G T VV + ++ Sbjct: 188 IAATIASLKVMDVTVGLVKAAIFGFLIALMGCYHGYNSRGGAEGVGAATTAAVVAASILL 247 Query: 358 IIIDSLFAIFYFA 370 + D L +F+ Sbjct: 248 LTFDYLLTDVFFS 260 >gi|29349246|ref|NP_812749.1| hypothetical protein BT_3838 [Bacteroides thetaiotaomicron VPI-5482] gi|253573093|ref|ZP_04850484.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29341154|gb|AAO78943.1| putative ABC transporter [Bacteroides thetaiotaomicron VPI-5482] gi|251837316|gb|EES65416.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 247 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G + + + F + +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIILMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|68249643|ref|YP_248755.1| ABC transporter permease [Haemophilus influenzae 86-028NP] gi|68057842|gb|AAX88095.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 86-028NP] gi|309973443|gb|ADO96644.1| Phospholipid ABC transporter, permease component [Haemophilus influenzae R2846] Length = 261 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I LG + + L++QM+ +GV + +++L Sbjct: 6 ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G+S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGSSLVGVDWKGVDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ + + +I G IKA F A A+ +A+ G+ S + + T VV + + Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFILTAIMFG 259 >gi|312131750|ref|YP_003999090.1| hypothetical protein Lbys_3075 [Leadbetterella byssophila DSM 17132] gi|311908296|gb|ADQ18737.1| protein of unknown function DUF140 [Leadbetterella byssophila DSM 17132] Length = 243 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G + E K + I + +G+ + +V +++F GAV Q L Sbjct: 5 FGKFLLFLYELFTRRESLKVYWKRFIDECMMIGIDSLLIVCIVAFFIGAVTCVQINANLV 64 Query: 192 QFGAEIFSI-DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + + +++ + L E+ V++AG+ GS I +E+G+M+I E+I+A+ MG++ Sbjct: 65 SPIIPTYIVSNIVRDMMLLELSSTFICVILAGKVGSNIASELGTMRITEQIEALEVMGIN 124 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 L+ P++ A + P+L IL+ F I+G I I + + N+ Sbjct: 125 AASYLVLPKVLAAFVMFPILAILSGFIGIVGGYIAGTATGIITPEQYIYGIRFSFIPFNL 184 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +IK+ I ++ +GF + +GK TT V S ++I D L A Sbjct: 185 VIPIIKSAVFGVLIATISAYKGFYTRGGALEVGKVSTTAVTNSCIAILIADYLLAELLT 243 >gi|298384787|ref|ZP_06994346.1| membrane protein [Bacteroides sp. 1_1_14] gi|298261931|gb|EFI04796.1| membrane protein [Bacteroides sp. 1_1_14] Length = 247 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G + + + F + +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYLNEMEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPVLVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|282880876|ref|ZP_06289569.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] gi|281305258|gb|EFA97325.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1] Length = 250 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 2/250 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I + G + G + + + F I++M +GV +P+V+LISF GA Sbjct: 2 VIKLIITYLITFGKYLLLMGRTFSRPERMRMFFKQYIKEMTKLGVDSIPLVLLISFFIGA 61 Query: 181 VIAQQGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 VI Q + ++ + + L E +++AG+ GS I +E+G+M++ + Sbjct: 62 VICIQMKINVQSPWMPRWTTGYVTREILLLEFSSAFMCLILAGKIGSNIASELGTMRVTQ 121 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ MG++ LI P+I LI +P L I ++ + +IGA + A + Sbjct: 122 QIDALDIMGVNPACYLILPKIMGLITIMPFLVIFSSVAGMIGAYATA-YSGVLSPADLTT 180 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + + I+ +IK+ A I V+ GF+V + ++G+ T VV S +V+ Sbjct: 181 GLQYSFKVWFIWMSIIKSLVFAFIIASVSSYYGFSVEGGAVAVGEASTNAVVSSSVLVLF 240 Query: 360 IDSLFAIFYF 369 D Sbjct: 241 ADVFLTPLLS 250 >gi|150009005|ref|YP_001303748.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503] gi|256840994|ref|ZP_05546501.1| ABC transporter permease [Parabacteroides sp. D13] gi|262383895|ref|ZP_06077031.1| ABC transporter permease [Bacteroides sp. 2_1_33B] gi|298375763|ref|ZP_06985719.1| membrane protein [Bacteroides sp. 3_1_19] gi|301312055|ref|ZP_07217977.1| putative membrane protein [Bacteroides sp. 20_3] gi|149937429|gb|ABR44126.1| conserved hypothetical protein, putative ABC transporter permease protein [Parabacteroides distasonis ATCC 8503] gi|256736837|gb|EEU50164.1| ABC transporter permease [Parabacteroides sp. D13] gi|262294793|gb|EEY82725.1| ABC transporter permease [Bacteroides sp. 2_1_33B] gi|298266800|gb|EFI08457.1| membrane protein [Bacteroides sp. 3_1_19] gi|300830157|gb|EFK60805.1| putative membrane protein [Bacteroides sp. 20_3] Length = 248 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 2/240 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H +G + ++ F LI+++Y +GV + +VI+IS G VIA Q + Sbjct: 4 ALHRMGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQIS 63 Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +S F + L E + A+++AG+ GS I +EIG+M++ E+IDA+ Sbjct: 64 LNISSPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTA 305 MG++ LI P++ L+I +P+L I + F+ I+G + + + F Sbjct: 124 MGVNSANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYF 183 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243 >gi|313886966|ref|ZP_07820667.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923573|gb|EFR34381.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] Length = 251 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + ++G + K+ F LIR+M G+ + +V++ISF G VI Sbjct: 5 IGNALSVMGEYTLLMVQVFRRPKKWGIFFKQLIREMAKYGLDSIWIVVIISFFIGTVITI 64 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + +S F + E + +++AG+ GS+I +E+ +M++ E+IDA Sbjct: 65 QLSINMSSPLIPRFTIGYAGREIMFLEFSSSIMCLILAGKVGSSIASELATMRVTEQIDA 124 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L++ +P+L++++ + ++G + + I + F + Sbjct: 125 MEIMGVNSANFLILPKILGLMLFIPVLSVISMATGLVGGYLATFFIPSITPSDFEMGLQT 184 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + NIF +IK+ A I A G+ V + +G+ T VV S ++++ D + Sbjct: 185 FFVVKNIFYSIIKSLVYAFIISSGASYFGYTVKGGALGVGRASTNAVVSSCVLILLADVM 244 Query: 364 FAIFYF 369 F Sbjct: 245 LTSLLF 250 >gi|261379496|ref|ZP_05984069.1| toluene tolerance ABC efflux transporter, permease [Neisseria subflava NJ9703] gi|319638901|ref|ZP_07993659.1| ABC transport inner membrane subunit [Neisseria mucosa C102] gi|284797959|gb|EFC53306.1| toluene tolerance ABC efflux transporter, permease [Neisseria subflava NJ9703] gi|317399805|gb|EFV80468.1| ABC transport inner membrane subunit [Neisseria mucosa C102] Length = 258 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + + A S IRQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARPRLSIRQIYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V ++ + +F Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVEWLGLDGGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|189462219|ref|ZP_03011004.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136] gi|189431072|gb|EDV00057.1| hypothetical protein BACCOP_02902 [Bacteroides coprocola DSM 17136] Length = 246 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G A +F+ +L +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYLMLMGRVFARPERFRMYLKQYRNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + +++AG+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 68 SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALDIMGVN 127 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I L+ +PLL + F+ +IGA W F + + Sbjct: 128 SASYLILPKILGLMTMIPLLVTFSIFAGVIGAFCTAWFAGITNATDLEYGFQYSFVEWYV 187 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + IK+ A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 188 WCSFIKSLVFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVCSSVLILFSDLILTQLLS 246 >gi|33863666|ref|NP_895226.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9313] gi|33635249|emb|CAE21574.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9313] Length = 248 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + + L Q+ G +V++ G V Q A +LS Sbjct: 10 LGNSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + + Sbjct: 70 RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ IL A+ + Y IP VF++ + T ++ Sbjct: 130 VEYLVVPRVIAMVVMAPVQCILFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ I ++A G +G T VV ++ V ++D L F+ Sbjct: 190 FMLIKSLVFGLQIAVLACGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248 >gi|157148765|ref|YP_001456084.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895] gi|157085970|gb|ABV15648.1| hypothetical protein CKO_04597 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTLRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR+WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRLWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQDAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|156935718|ref|YP_001439634.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894] gi|156533972|gb|ABU78798.1| hypothetical protein ESA_03587 [Cronobacter sakazakii ATCC BAA-894] Length = 260 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 6 LASMGQRGLKFSASFGRAGLMLFNAIVGKPEFRKHGPLLVRQLYNVGVLSMIIIIVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +ISPR WA +ISLPLLT++ + G S+V + I F Sbjct: 126 TEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGVWGGSLVGVNWKGIDAGFF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 186 WSAMQDAVDWRMDLINCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLA 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFVLTALMFG 259 >gi|124268284|ref|YP_001022288.1| hypothetical protein Mpe_A3100 [Methylibium petroleiphilum PM1] gi|124261059|gb|ABM96053.1| putative membrane protein [Methylibium petroleiphilum PM1] Length = 260 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 120/253 (47%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +Q LG G AS ++ Q++++G + ++ + G Sbjct: 8 DVGYAVRAQLTGLGAAARLFGRMLASFGPALRRGRLVVDQVHFLGNHSLAIITVSGLFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+++ AEIG MK E Sbjct: 68 FVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M +D V+ +++PR W + ++PLL + + I+G V I F+S Sbjct: 128 QLTAMEMMAVDPVQRVLAPRFWGGVFAMPLLAAVFSAVGILGGWAVGVLLIGIDAGGFWS 187 Query: 300 RFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ G++K+ + VA+ EG+ + + T VV + V+ Sbjct: 188 QMQGGVDVFKDVGNGIVKSMVFGVTVTFVALWEGYTCQPTPEGVSRATTRTVVVASLAVL 247 Query: 359 IIDSLFAIFYFAI 371 +D + F+I Sbjct: 248 GLDFVLTAMMFSI 260 >gi|330430336|gb|AEC21670.1| hypothetical protein PT7_3130 [Pusillimonas sp. T7-7] Length = 262 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 131/268 (48%), Gaps = 8/268 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 S L +G ++ I+ + + G +++ + + +Q++++ Sbjct: 1 MTSPVQLIAALGARVRNSISGMGAFMRLAGAILARSDIVFKRP-------GLISQQIHFI 53 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G + ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR Sbjct: 54 GNYSLLIIAVSGLFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGR 113 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +G+++ AEIG MK E+I A+ M +D +R +++PR W ++++P+L + + IIG Sbjct: 114 AGTSLTAEIGLMKAGEQIAAMEVMAVDPIRRVLAPRFWGGVVAMPVLAAVFSMVGIIGGW 173 Query: 284 IVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 IV I F+S+ ++ G +K+ A+ ++A+ G+ + Sbjct: 174 IVGVVLIGIDPGAFWSQMQGGVDVFKDVLNGFVKSVVFGVAVTLIALHAGWTAKATPEGV 233 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + T VV +V+ +D + F+ Sbjct: 234 SRATTRTVVSGSLMVLGLDFILTALMFS 261 >gi|187930306|ref|YP_001900793.1| hypothetical protein Rpic_3239 [Ralstonia pickettii 12J] gi|187727196|gb|ACD28361.1| protein of unknown function DUF140 [Ralstonia pickettii 12J] Length = 255 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 1/250 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 G +S +I Q+ ++G ++ + G V Sbjct: 6 GRFVLVLISRFGYAARTLISLIGASGDVLRRPRLVIEQLRFIGNDSFIIIAVSGLFVGFV 65 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK E++ Sbjct: 66 LGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQL 125 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ M +D + +++PR WA I++PLL + + I+G V + F+S+ Sbjct: 126 IAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDPGAFWSQM 185 Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + ++ G+IK+ A+ +A+ +G+ + + T VV + V+ + Sbjct: 186 QAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTRTVVIASLTVLAL 245 Query: 361 DSLFAIFYFA 370 D + F+ Sbjct: 246 DFVLTALMFS 255 >gi|241664474|ref|YP_002982834.1| hypothetical protein Rpic12D_2892 [Ralstonia pickettii 12D] gi|240866501|gb|ACS64162.1| protein of unknown function DUF140 [Ralstonia pickettii 12D] Length = 255 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 117/250 (46%), Gaps = 1/250 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 G +S ++ Q+ ++G ++ + G V Sbjct: 6 GRFVLVLISRFGYAARTLISLIGASGDVLRRPRLVLEQLRFIGNDSFIIIAVSGLFVGFV 65 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK E++ Sbjct: 66 LGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQL 125 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ M +D + +++PR WA I++PLL + + I+G V + F+S+ Sbjct: 126 IAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDPGAFWSQM 185 Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + ++ G+IK+ A+ +A+ +G+ + + T VV + V+ + Sbjct: 186 QAGVDVMDDVLNGVIKSVVFGVAVTFIALYQGYEAKATPEGVSRATTRTVVIASLTVLAL 245 Query: 361 DSLFAIFYFA 370 D + F+ Sbjct: 246 DFVLTALMFS 255 >gi|145627949|ref|ZP_01783750.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 22.1-21] gi|145632451|ref|ZP_01788186.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 3655] gi|145634244|ref|ZP_01789955.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittAA] gi|145636462|ref|ZP_01792130.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittHH] gi|145638100|ref|ZP_01793710.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittII] gi|148826300|ref|YP_001291053.1| ABC transporter permease [Haemophilus influenzae PittEE] gi|229843875|ref|ZP_04464016.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 6P18H1] gi|229846118|ref|ZP_04466230.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 7P49H1] gi|144979724|gb|EDJ89383.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 22.1-21] gi|144987358|gb|EDJ93888.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 3655] gi|145268688|gb|EDK08681.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittAA] gi|145270287|gb|EDK10222.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittHH] gi|145272429|gb|EDK12336.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittII] gi|148716460|gb|ABQ98670.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittEE] gi|229811122|gb|EEP46839.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 7P49H1] gi|229812869|gb|EEP48557.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae 6P18H1] gi|301169827|emb|CBW29431.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Haemophilus influenzae 10810] gi|309751266|gb|ADO81250.1| Phospholipid ABC transporter, permease component [Haemophilus influenzae R2866] Length = 261 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I LG + + L++QM+ +GV + +++L Sbjct: 6 ISALGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVGVDWKGVDSGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S ++ + + +I G IKA F A A+ +A+ G+ S + + T VV + + Sbjct: 186 WSVMQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 VLGLDFILTAIMFG 259 >gi|171060067|ref|YP_001792416.1| hypothetical protein Lcho_3393 [Leptothrix cholodnii SP-6] gi|170777512|gb|ACB35651.1| protein of unknown function DUF140 [Leptothrix cholodnii SP-6] Length = 259 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 119/256 (46%), Gaps = 1/256 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + +GL + + Q++++G + ++ + Sbjct: 4 GLSDLGYSVRCKLADIGLATRLLLRLLVLTPVALRRWRLVFDQIHFLGNHSLAIIGVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+A+ AEIG MK Sbjct: 64 FVGFVLGLQGYYTLQRYGSSEALGLLVALSLVRELGPVVTALLFAGRAGTALTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ A+ M +D ++ +++PR ++++PLL + + IIG +V + Sbjct: 124 SGEQLAAMEMMAVDPIQRVLAPRFIGGMVAMPLLAAVFSAVGIIGGWLVGVVMIGVDAGS 183 Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ +I G+IK+ A + +A+ +G+ + + T VV S Sbjct: 184 FWSQMQGGVDVFKDIGNGVIKSVVFALIVTFIALLQGYECQPTPEGVARATTRTVVVSSL 243 Query: 356 IVIIIDSLFAIFYFAI 371 V+ D + F+I Sbjct: 244 AVLAFDFVLTALMFSI 259 >gi|148828248|ref|YP_001293001.1| ABC transporter permease [Haemophilus influenzae PittGG] gi|148719490|gb|ABR00618.1| conserved ABC-type transport system protein, permease component [Haemophilus influenzae PittGG] Length = 261 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 1/251 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 LG + + L++QM+ +GV + +++L G Sbjct: 9 LGKQVIDFFRALGRAGFMLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGM 68 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E+ Sbjct: 69 VLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQ 128 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + ++ M +D +R +I+PR WA +IS+P+L+IL I G S+V + + F+S Sbjct: 129 LSSLEMMAVDPLRRVIAPRFWAGVISMPILSILFIAIGIWGGSLVGVDWKGVDSGSFWSV 188 Query: 301 FHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ + + +I G IKA F A A+ +A+ G+ S + + T VV + +V+ Sbjct: 189 MQNSVSWSYDILNGFIKAVFFAVAVTWIALFNGYDCMPTSEGISQATTRTVVHASLVVLG 248 Query: 360 IDSLFAIFYFA 370 +D + F Sbjct: 249 LDFILTAIMFG 259 >gi|42524770|ref|NP_970150.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] gi|39576980|emb|CAE78209.1| ABC transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 262 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 129/251 (51%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F +G V + + + + + + Q+Y +G+ +P++++ + G Sbjct: 8 FTVFMMEVLFFIGGVGLLSRDVFRETIHGRIYYKLISEQIYQIGMRSLPLIVITAVSIGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V++ Q L +FG +++ L+++ LRE+G + T++M+A R G+ I +EIGSM + ++ Sbjct: 68 VMSLQFGMGLEKFGGKLYVPKLLAVTILREMGPVFTSLMLAARVGAGIASEIGSMVVTQQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDAIR +G ++ ++ PR+ A +I+LP+L +AN +G I+ ++ ++ + Sbjct: 128 IDAIRALGTSPIKKIVIPRVLACLITLPILVSIANIVGNLGGLIIGATELNLDPNFYYLK 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +T+ + + +G K F A I I + G V + +G T VV S ++++ Sbjct: 188 VMTTSNIQDYLSGFAKTFFFAIFIAIPSCYFGLNVKAGTKEVGIATTKAVVVSSILIVVG 247 Query: 361 DSLFAIFYFAI 371 D + ++ + Sbjct: 248 DFFLSKLFWIV 258 >gi|88811866|ref|ZP_01127119.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231] gi|88790750|gb|EAR21864.1| hypothetical protein NB231_05736 [Nitrococcus mobilis Nb-231] Length = 258 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 1/255 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + F + + LG +I Q+Y GV + ++++ Sbjct: 3 EWLRLFGEQTLAATARLGRGYLFLLRVLLGLPGLLLRPGLVITQIYATGVLSLLIIVVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L FGAE L+++ RE+G +++A++ +GR+GSA+ AEIG M Sbjct: 63 LFVGMVLGLQGYNTLVNFGAEQSLGVLVALSLTRELGPVVSALLFSGRAGSALTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ + M +D R +++PR+ +I+LPLL + + G V + Sbjct: 123 KATEQLSGMEMMAVDPERRVVAPRLLGGMIALPLLAAIFTLVGVFGGYFVGTVLLGVDSG 182 Query: 296 VFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S+ + + ++ G+IK+ + A+ EGF S + + T VV S Sbjct: 183 AYWSQMQAQVSFTDDVVNGVIKSLVFGFVVSWTAVFEGFDCAPTSEGVSRATTRAVVHSS 242 Query: 355 SIVIIIDSLFAIFYF 369 V+ +D + F Sbjct: 243 LAVLGLDFILTALMF 257 >gi|309782892|ref|ZP_07677612.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308918316|gb|EFP63993.1| toluene tolerance ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 255 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 1/250 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 G +S +I Q+ ++G ++ + G V Sbjct: 6 GRFVLVLISRFGYAARTLISLIGASGDVLRRPRLVIEQLRFIGNDSFIIIAVSGLFVGFV 65 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + QG L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK E++ Sbjct: 66 LGLQGYNTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQL 125 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ M +D + +++PR WA I++PLL + + I+G V + F+S+ Sbjct: 126 IAMEMMAVDPLARVLAPRFWAGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDPGAFWSQM 185 Query: 302 HSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + ++ G+IK+ A+ +A+ +G+ + + T VV + V+ + Sbjct: 186 QAGVDVMDDVLNGVIKSFVFGVAVTFIALYQGYEAKATPEGVSRATTRTVVIASLTVLAL 245 Query: 361 DSLFAIFYFA 370 D + F+ Sbjct: 246 DFVLTALMFS 255 >gi|288942538|ref|YP_003444778.1| hypothetical protein Alvin_2840 [Allochromatium vinosum DSM 180] gi|288897910|gb|ADC63746.1| protein of unknown function DUF140 [Allochromatium vinosum DSM 180] Length = 259 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ ++ + +L ++ GE L Q++ +GV Sbjct: 1 MLDPLARLGRGVLDALERLGRGHLLLLAILLGLGEVLRRP-------RLLWEQLFNIGVL 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V + G V+A QG + LSQFGA +++ +RE+G ++TA+++AGR+GS Sbjct: 54 SLLIVGVSGLFVGMVLALQGYYVLSQFGAAESLGVMVAASLVRELGPVVTALLVAGRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++ + M +D VR ++ PR ++S+PLL + + ++G V Sbjct: 114 ALTAEIGLMKATEQLSGLEMMAVDPVRRILVPRFVGGVLSMPLLAAIFSAVGVLGGYFVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + ++S+ + ++ G+IK+ + VA+ +G+ S + + Sbjct: 174 VGLLGVDEGAYWSQMQAKIDFDEDLVNGVIKSLAFGVVVTWVALFQGYDTVPTSEGVSRS 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + +V+ +D + F Sbjct: 234 TTRAVVHAALVVLGLDFVLTALMFG 258 >gi|160900967|ref|YP_001566549.1| hypothetical protein Daci_5535 [Delftia acidovorans SPH-1] gi|160366551|gb|ABX38164.1| protein of unknown function DUF140 [Delftia acidovorans SPH-1] Length = 260 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 127/261 (48%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 IG + + + + G +++ G + Q++++G + ++ Sbjct: 7 ARIGAAVRQQLTQLGMGTRLFGRLLALMGPALGRP-------RLIGDQIHFLGNYSLAII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V+ QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+A+ AE Sbjct: 60 GVSGLFVGFVLGLQGYYTLQRYGSAEALGLLVALSLVRELGPVVTALLFAGRAGTALTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MK E++ A+ M +D VR +++PR A +I++PLL + + +IG +V Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVRRILAPRFVAGLIAMPLLAAVFSAVGVIGGWLVGVVMIG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+ + + ++ G++K+ A+ +A+ +G+A + + T V Sbjct: 180 VDGGAFWGQMQNGVDWWYDLGNGVLKSLVFGVAVTFIALLQGYAAKPTPEGVSRATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D L F++ Sbjct: 240 VMASLAVLGLDFLLTATMFSL 260 >gi|237712741|ref|ZP_04543222.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408122|ref|ZP_06084669.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|293369494|ref|ZP_06616073.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|294644221|ref|ZP_06721991.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294808601|ref|ZP_06767341.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298480165|ref|ZP_06998363.1| membrane protein [Bacteroides sp. D22] gi|229447218|gb|EEO53009.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353674|gb|EEZ02767.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292635379|gb|EFF53892.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292640431|gb|EFF58679.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294444200|gb|EFG12927.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298273446|gb|EFI15009.1| membrane protein [Bacteroides sp. D22] Length = 247 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGINSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFVEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|121635620|ref|YP_975865.1| putative ABC transport inner membrane subunit [Neisseria meningitidis FAM18] gi|120867326|emb|CAM11097.1| putative ABC transport inner membrane subunit [Neisseria meningitidis FAM18] gi|325131371|gb|EGC54080.1| putative membrane protein [Neisseria meningitidis M6190] gi|325133423|gb|EGC56087.1| putative membrane protein [Neisseria meningitidis M13399] gi|325141491|gb|EGC63964.1| putative membrane protein [Neisseria meningitidis 961-5945] gi|325143674|gb|EGC65993.1| putative membrane protein [Neisseria meningitidis M01-240013] gi|325199054|gb|ADY94510.1| putative membrane protein [Neisseria meningitidis G2136] gi|325206870|gb|ADZ02323.1| putative membrane protein [Neisseria meningitidis M04-240196] Length = 258 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLSLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|312888399|ref|ZP_07747975.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] gi|311299233|gb|EFQ76326.1| protein of unknown function DUF140 [Mucilaginibacter paludis DSM 18603] Length = 243 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 1/239 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + LG I KF + ++R+M +G+ + ++ +IS GAV Q A Sbjct: 1 MLYHLGRYILLMKLSFKRPEKFSVYWAEVMREMVSIGLGSLGIISIISVFIGAVATIQTA 60 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL S F + + + E ++A+++AGR GS+I ++IG+M++ E+IDA+ Sbjct: 61 FQLVSDFIPKTIVGTITRDSTILEFSPTISALVLAGRVGSSIASQIGTMRVTEQIDALEI 120 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LISP+I + ++ +PLLT+++ ++G I ++ A + + Sbjct: 121 MGVNAPGYLISPKIISGVLMIPLLTVISISLGLLGGYIACAASSEVSTADYITGLTDGFK 180 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++KA F I + +GF + +G+ T VV S ++ D + + Sbjct: 181 TIILQVSMVKATFFGFIITSICAYQGFYTSGGALEVGQSATRGVVFSCIFILFADLVIS 239 >gi|293602880|ref|ZP_06685319.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818674|gb|EFF77716.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 262 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 132/263 (50%), Gaps = 8/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N+ +G + K I+ G +++ +G + + +Q++++G + Sbjct: 6 NMVGALGGWVRKQISGIGFFTRFFGGMLARSGIIFSRP-------RLVSQQVHFIGNYSL 58 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 59 LIIAVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSL 118 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + ++G +V Sbjct: 119 TAEIGLMKAGEQLSAMEMMAVDPIRRVLVPRLWGGIIAMPILAAVFSMVGVLGGWVVGVL 178 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+S+ + + ++ G+IK+ + +VA+ EG+ + + T Sbjct: 179 MIGVDAGAFWSQMQNGVDVWNDVANGVIKSVVFGITVTLVALYEGWQAKPTPEGVARATT 238 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV V+ +D L F Sbjct: 239 RTVVVGSLAVLGLDFLLTALMFG 261 >gi|288924563|ref|ZP_06418500.1| ABC transporter, permease [Prevotella buccae D17] gi|315607425|ref|ZP_07882421.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella buccae ATCC 33574] gi|288338350|gb|EFC76699.1| ABC transporter, permease [Prevotella buccae D17] gi|315250857|gb|EFU30850.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella buccae ATCC 33574] Length = 248 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + G + + + F+ +++M +GV + +V+LISF GAVI Sbjct: 3 ILKWLTTFGKYLILMGRSFSRPERMRMFMKRYVKEMSQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QMKLNIQSPWMPRWVSGYTTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+ +P L I ++ IIGA + + + Sbjct: 123 LDIMGVNSAGYLILPKILGLVTIMPFLVIFSSAMGIIGAYATAYVGHILSPDDLTLGLQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ +IK+ F A I V+ G+ V S +G+ T VV S +++ D Sbjct: 183 SFNAWFVWMSIIKSLFFAFIIASVSSYFGYTVEGGSVEVGESSTDAVVCSSVLILFSDVF 242 Query: 364 FAIFYF 369 Sbjct: 243 LTQVLS 248 >gi|261401680|ref|ZP_05987805.1| toluene tolerance ABC efflux transporter, permease [Neisseria lactamica ATCC 23970] gi|269208206|gb|EEZ74661.1| toluene tolerance ABC efflux transporter, permease [Neisseria lactamica ATCC 23970] Length = 258 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSVAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|159026095|emb|CAO86324.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 288 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 113/264 (42%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +++ + + F + S L I TG + K QM G + Sbjct: 14 VRSILVAMKDLLAIFSKELSSWFRRCWLAILLTGRVFYFLFTRKPDWRVTQEQMVAAGPA 73 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + + ++ + V G + Q A + GA ++++ RE+ ++ A+++AGR GS Sbjct: 74 SLIIAMITAAVIGMIFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGRVGS 133 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A AEIG+MK+ E+IDA+ + D V L+ PR+ A + +P L+I+A + +V Sbjct: 134 AFAAEIGTMKVTEQIDALYMLKTDPVEYLVLPRLIACCLMVPALSIMALLIGLGSGLLVG 193 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y I +VF + ++ +G +K I I+ G + +G+ Sbjct: 194 QSLYGIANSVFLDSVRGFLRVGDVLSGPVKGLVFGALIAIIGCNWGLTTDGGAKGVGQAT 253 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + + + + L F Sbjct: 254 TAAVVTMLLAIFVSNLLMTWILFQ 277 >gi|294634664|ref|ZP_06713197.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella tarda ATCC 23685] gi|291091910|gb|EFE24471.1| toluene tolerance ABC efflux transporter, permease [Edwardsiella tarda ATCC 23685] Length = 260 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G + L RQ+Y VGV + ++++ Sbjct: 5 GLASLGRRGINVCAAFGRAGLMLFSALVGRPEPAKQWPLLRRQLYSVGVQSLLIIMVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +IS+PLLT++ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAIGIWGGSVVGVDWKGIDAGF 184 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|254670842|emb|CBA07277.1| putative membrane protein [Neisseria meningitidis alpha153] gi|308390063|gb|ADO32383.1| putative ABC transport inner membrane subunit [Neisseria meningitidis alpha710] gi|309378880|emb|CBX22467.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|319409726|emb|CBY90032.1| conserved hypothetical membrane protein [Neisseria meningitidis WUE 2594] gi|325127428|gb|EGC50359.1| putative membrane protein [Neisseria meningitidis N1568] gi|325137489|gb|EGC60074.1| putative membrane protein [Neisseria meningitidis ES14902] Length = 258 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|257092255|ref|YP_003165896.1| hypothetical protein CAP2UW1_0620 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044779|gb|ACV33967.1| protein of unknown function DUF140 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 271 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 131/267 (49%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + IG + + + +++ +G+ IR++YY Sbjct: 8 PGPLLSTIASIGHHVTDALQRLGFASRFFVMLLLCSGQSFRRP-------NLTIREIYYS 60 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G + ++++ G V+ QG L ++G+ L+++ +RE+G ++ A++ A R Sbjct: 61 GFQSLLIIMVSGLFIGMVLGMQGYETLQRYGSADALGILVALSLVRELGPVVAALLFASR 120 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GS+I AEIG MK E++ A+ M ++ + +++PR W +IS+PLL L + + + G Sbjct: 121 AGSSITAEIGLMKATEQLTAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSATGVFGGY 180 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++ + + F+S+ ++ +I++G++K+ A+ ++A+ EG+ + + Sbjct: 181 LIGVVFIGVDDGAFWSQMQASVDFRYDIWSGIVKSFVFGVAVSLIAVFEGYDALPTAEGV 240 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 + + VV+S ++ +D + F F Sbjct: 241 SSSIKSTVVKSALAILALDFVLTSFMF 267 >gi|313677561|ref|YP_004055557.1| hypothetical protein Ftrac_3477 [Marivirga tractuosa DSM 4126] gi|312944259|gb|ADR23449.1| protein of unknown function DUF140 [Marivirga tractuosa DSM 4126] Length = 243 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G G F + I + +G + + +V + S GAV Q A+ Sbjct: 1 MKSIGAYFIFLGSMFVRRESFSSYFKLTINECISIGWNSILIVAITSTFMGAVTTVQTAY 60 Query: 189 QLSQFGAEIFSIDLMSILQLR-EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L + + + ++ + E+ +TA++IAG+ GS+I +G+M+I E+IDA+ M Sbjct: 61 NLVSPLIQNYVVAQVTREMVVLELAPTITAIVIAGKVGSSIAGGLGTMRITEQIDALEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ L+ P+I A +I PLL ++A F A+ G I + + Sbjct: 121 GVNASSYLVLPKIVAAMIMYPLLVVIAGFLALYGGYIAGTLTGILTETEYVYGIRIDFNP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + LIK+ A I ++ +GF + +G+ T+ V +S V++ D + A Sbjct: 181 FTVQFALIKSLVFAFLIASISAFQGFFTTGGALEVGQSSTSAVTKSCIAVLLADYILAEL 240 Query: 368 YFA 370 Sbjct: 241 LLN 243 >gi|87303089|ref|ZP_01085887.1| possible transporter, membrane component [Synechococcus sp. WH 5701] gi|87282256|gb|EAQ74216.1| possible transporter, membrane component [Synechococcus sp. WH 5701] Length = 249 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 112/243 (46%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H LG + G+ ++ K + L L QM G +VI+ + G V Q A Sbjct: 6 YIHRLGSSVMIGGQSISALAKGRINLNDLFEQMLEAGPGSFLIVIITALAAGTVFNIQVA 65 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 +L++ GA ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + Sbjct: 66 AELTRQGAGFSVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITML 125 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 D V L+ PR+ A+++ P+ +L I + Y IP VF++ + Sbjct: 126 RTDPVEYLVVPRVLAMVVMAPVQCLLFFVVGIWSGQVSSTFLYSIPPTVFWNSVRTWMEP 185 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +++ + L+KA I ++A G +G T VV + V ++D + Sbjct: 186 SDLPSMLVKALVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLVDVVLTQV 245 Query: 368 YFA 370 F Sbjct: 246 LFG 248 >gi|33865118|ref|NP_896677.1| transporter, membrane component [Synechococcus sp. WH 8102] gi|33638802|emb|CAE07097.1| possible transporter, membrane component [Synechococcus sp. WH 8102] Length = 249 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L Q+ G + +V++IS G+V Q A +L+ Sbjct: 10 LGASLLIGGQAVTATLRGRINTVDLQDQLMEAGPGTLLIVLIISIAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ A+ I Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLMAVWSGQITSTALYNIPPAVFWTSVRTWMDPTDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++A G +G T VV + +V I+D + F Sbjct: 190 FMLVKALVFGLIIAVIACGWGLTTKGGPKEVGTSTTGAVVMILILVAIMDVVLTQVLFG 248 >gi|325268715|ref|ZP_08135344.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella multiformis DSM 16608] gi|324988959|gb|EGC20913.1| ABC superfamily ATP binding cassette transporter permease protein [Prevotella multiformis DSM 16608] Length = 248 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + G + G + + + FL +++M +GV + +V+LISF GAVI Q Sbjct: 7 LNTFGNYLILMGRSFSRPERMRMFLKRYVKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + + L E + ++++G+ GS I +E+G+M++ ++IDA+ M Sbjct: 67 NVQSPWMPHWVSGYVTREIMLLEFSSSIMCLILSGKVGSNIASELGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P++ LI +P L I + + IIGA + + I + Sbjct: 127 GINSASYLILPKMLGLITIMPFLVIFSAATGIIGAYATAYIGHIITPIDLTAGLQHDFNA 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK F A I V+ G+ V S +GK T VV S +++ D Sbjct: 187 WFMWMSIIKGFFFAFIISSVSSYMGYTVKGGSVEVGKASTDAVVCSSVLILFSDVFLTQI 246 Query: 368 YF 369 Sbjct: 247 LS 248 >gi|283836259|ref|ZP_06356000.1| toluene tolerance ABC efflux transporter, permease [Citrobacter youngae ATCC 29220] gi|291067623|gb|EFE05732.1| toluene tolerance ABC efflux transporter, permease [Citrobacter youngae ATCC 29220] Length = 260 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ LIRQ+Y VGV + ++I+ Sbjct: 5 ALASLGHRGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|238789753|ref|ZP_04633535.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC 33641] gi|238722112|gb|EEQ13770.1| hypothetical protein yfred0001_29030 [Yersinia frederiksenii ATCC 33641] Length = 235 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 1/234 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + L++Q+Y VGV + ++++ G V+ QG L+ + AE Sbjct: 1 MLFNALVGRPEPRKQWPLLLKQLYSVGVQSLLIIVVSGLFIGMVLGLQGFLILTTYSAEA 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 ++S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E+I ++ M +D +R +++ Sbjct: 61 SLGMMVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQISSLEMMAIDPLRRVVA 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIK 316 PR WA +IS+PLLT + I G S+V + I F+S S ++ LIK Sbjct: 121 PRFWAGLISMPLLTAIFVAVGIWGGSVVGVDWKGIDGGFFWSAMQSAVEWRTDLLNCLIK 180 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + A + +A+ G+ S + + T VV S V+ +D + F Sbjct: 181 SLVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFVLTALMFG 234 >gi|329962630|ref|ZP_08300578.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT 12057] gi|328529661|gb|EGF56559.1| hypothetical protein HMPREF9446_02167 [Bacteroides fluxus YIT 12057] Length = 258 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 VK++ +G I G A + + F I +M +GV+ + +V+LISF Sbjct: 5 AVKYLRVMIKALKTVGRYIMLMGRVFARPERMRMFFRQYINEMEQLGVNSIGIVLLISFF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAVI Q + + + + L E + +++AG+ GS I +E+G+M+ Sbjct: 65 IGAVITIQIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + ++IDA+ MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 125 VTQQIDALEIMGVNSANYLILPKISAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVD 184 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 I+ G+IK+ F A I V+ G+ V S +GK T VV S + Sbjct: 185 LEYGLQYMFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVL 244 Query: 357 VIIIDSLFAIFYFA 370 ++ D + Sbjct: 245 ILFSDLILTQLLMG 258 >gi|15677795|ref|NP_274959.1| hypothetical protein NMB1965 [Neisseria meningitidis MC58] gi|218767464|ref|YP_002341976.1| putative ABC transport inner membrane subunit [Neisseria meningitidis Z2491] gi|254804222|ref|YP_003082443.1| putative ABC transport system permease protein [Neisseria meningitidis alpha14] gi|296313905|ref|ZP_06863846.1| toluene tolerance ABC efflux transporter, permease [Neisseria polysaccharea ATCC 43768] gi|313669181|ref|YP_004049465.1| ABC transport inner membrane subunit [Neisseria lactamica ST-640] gi|7227225|gb|AAF42294.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|121051472|emb|CAM07765.1| putative ABC transport inner membrane subunit [Neisseria meningitidis Z2491] gi|254667764|emb|CBA03695.1| putative ABC transport system permease protein [Neisseria meningitidis alpha14] gi|254672981|emb|CBA07458.1| putative ABC transport system permease protein [Neisseria meningitidis alpha275] gi|261393293|emb|CAX50921.1| conserved hypothetical membrane protein [Neisseria meningitidis 8013] gi|296839439|gb|EFH23377.1| toluene tolerance ABC efflux transporter, permease [Neisseria polysaccharea ATCC 43768] gi|313006643|emb|CBN88109.1| putative ABC transport inner membrane subunit [Neisseria lactamica 020-06] gi|316985593|gb|EFV64540.1| toluene tolerance protein Ttg2B [Neisseria meningitidis H44/76] gi|325129426|gb|EGC52257.1| putative membrane protein [Neisseria meningitidis OX99.30304] gi|325135556|gb|EGC58174.1| putative membrane protein [Neisseria meningitidis M0579] gi|325139615|gb|EGC62155.1| putative membrane protein [Neisseria meningitidis CU385] gi|325201013|gb|ADY96468.1| putative membrane protein [Neisseria meningitidis H44/76] gi|325201398|gb|ADY96852.1| putative membrane protein [Neisseria meningitidis M01-240149] gi|325204915|gb|ADZ00369.1| putative membrane protein [Neisseria meningitidis M01-240355] gi|325207379|gb|ADZ02831.1| putative membrane protein [Neisseria meningitidis NZ-05/33] Length = 258 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|124022277|ref|YP_001016584.1| transporter membrane component [Prochlorococcus marinus str. MIT 9303] gi|123962563|gb|ABM77319.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9303] Length = 248 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + + L Q+ G +V++ G V Q A +LS Sbjct: 10 LGSSLIIGGQAVAATARGRINKVDLFDQLMEAGPGSFLIVLITGLAAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + + Sbjct: 70 RQGAGSTVGGILAIGMAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTEP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L A+ + Y IP VF++ + T ++ Sbjct: 130 VEYLVVPRVIAMVVMAPVQCMLFFGIALWSGQVSSTNLYQIPPEVFWNSVRTWLTPDDMP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+K+ I +++ G +G T VV ++ V ++D L F+ Sbjct: 190 FMLVKSLVFGLQIAVLSCGWGLTTRGGPKEVGTSTTGAVVMTLVTVSLMDVLLTQILFS 248 >gi|161506125|ref|YP_001573237.1| hypothetical protein SARI_04313 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867472|gb|ABX24095.1| hypothetical protein SARI_04313 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 260 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + G +F+ L+RQ+Y VGV + ++++ Sbjct: 5 ALASLGRSGIKTVRTFGRAGLMLFNAVIGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|189347228|ref|YP_001943757.1| hypothetical protein Clim_1737 [Chlorobium limicola DSM 245] gi|189341375|gb|ACD90778.1| protein of unknown function DUF140 [Chlorobium limicola DSM 245] Length = 264 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 115/243 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + + K K + + Q G +P+V++ + G+++A Sbjct: 17 AKDFLLTMQEFFLFSMRAFFTLPKLKRYWRDFLDQATICGTDSIPIVLVSAVSIGSLLAI 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ SI +RE+G LL +M++ R GS AE+G+MKI+E+IDA+ Sbjct: 77 EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKISEQIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A ++ LT L++F+ + A+ + Y+ + +F++ + Sbjct: 137 RAFGTDPVAKLVMPRLAAALVMFIPLTALSDFAGLQSAAYLAEHYHHLDPGIFWNAVYPR 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G KAP A I +V+ GF + +G+ +V S +V+I + Sbjct: 197 LGPKDFVVGFAKAPVFAIIITLVSSYNGFIAKGGTAGVGRATIKGIVVSSGLVLIANFYV 256 Query: 365 AIF 367 + Sbjct: 257 SKI 259 >gi|87120456|ref|ZP_01076350.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121] gi|86164099|gb|EAQ65370.1| hypothetical protein MED121_21902 [Marinomonas sp. MED121] Length = 260 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 2/252 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILI 174 K I + + G + K G + L++Q+Y VGV + ++++ Sbjct: 2 KPIQAAGVRALNTIGAFGQAGLFLIQVMLHRPKSLSGAMGLLMKQIYSVGVLSLVIILVS 61 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 G V+ QG L++FG+E L+++ LRE+G ++TA++ AGR+ SA+ AEIG Sbjct: 62 GLFIGMVLGLQGYTILAKFGSEQAVGQLLALTLLRELGPVVTALLFAGRACSALTAEIGL 121 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK E++ ++ MG+D R +I+PR A +I LP+L ++ + I+G V + I Sbjct: 122 MKATEQLSSLEMMGVDPYRRIIAPRFIAGLICLPILCVIFSAVGILGGEFVAVTWLQIHG 181 Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F+S + + ++ G+IKA A A +A+ +G+ S +GK T VV Sbjct: 182 GSFWSLMQQSVYFSTDVVNGIIKAFCFAIATTWIAVFQGYQCEPTSEGIGKATTRTVVLG 241 Query: 354 ISIVIIIDSLFA 365 ++ +D + Sbjct: 242 SLSILALDFILT 253 >gi|295677863|ref|YP_003606387.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] gi|295437706|gb|ADG16876.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1002] Length = 255 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + ++ + +Q+++VG + Sbjct: 1 MISTIGRSVITGLGTAGYATRFFLRLVLEIFPLLRRP-------RLVTKQIHFVGNYSLV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D V+++I+PR+WA IIS+P+L + + ++G +V Sbjct: 114 AEIGLMKAGEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVLGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ S + ++ G++K+ A+ VA+ +G+ + + T Sbjct: 174 IGVDAGAFWSQMQSGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTR 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|163854451|ref|YP_001628749.1| hypothetical protein Bpet0147 [Bordetella petrii DSM 12804] gi|163258179|emb|CAP40478.1| putative membrane protein [Bordetella petrii] Length = 259 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 131/265 (49%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 +G + ++ LG +++ +G + + +Q++++G Sbjct: 1 MSGPVQALGGWVRAQVSGVGFFTRFLGALLARSGIAVSRP-------RLVSQQVHFIGNY 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++I+ G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 54 SLLIIIVSGMFVGFVLGLQGYYTLNRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M +D +R ++ PR+W II++P+L + + I+G +V Sbjct: 114 SLTAEIGLMKAGEQLAAMEVMAVDPMRRVLVPRLWGGIIAMPVLAAVFSMVGILGGWVVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ S + ++ G++K+ + +VA+ EG+ + + Sbjct: 174 VLLIGVDAGAFWSQMQSGVDVWDDVANGVLKSLVFGVTVTLVALYEGWQARPTPEGVARA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV V+ +D L F Sbjct: 234 TTRTVVVGSLAVLGLDFLLTALMFG 258 >gi|310766231|gb|ADP11181.1| ABC transporter, permease subunit, probable toluene tolerance protein [Erwinia sp. Ejp617] Length = 235 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 1/234 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 +F+ L++Q+Y +GV + +V++ G V+ QG L +GAE Sbjct: 1 MLFHALFGIPRFRKHAPLLVKQLYNIGVLSLLIVVVSGLFIGMVLGLQGYLILKTYGAEA 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 ++++ LRE+G +++A++ AGR+GSA+ AEIG MK E++ ++ M +D +R +IS Sbjct: 61 SLGMMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLRRIIS 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIK 316 PR WA IS+PLLT++ I+G ++V + I F+S + L +I IK Sbjct: 121 PRFWAGFISMPLLTLIFVAVGILGGALVGVSWKGIDSGFFWSAMQNAVDLQTDIINCTIK 180 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + A + +A+ G+ S + + T VV + V+ +D + F Sbjct: 181 SAVFAVTVTWIALFNGYDAIPTSEGISRATTRTVVHASLAVLGLDFVLTALMFG 234 >gi|86609938|ref|YP_478700.1| hypothetical protein CYB_2505 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558480|gb|ABD03437.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 252 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 119/239 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G G+ + + + + Q+ VG+ + +V++ + V V Q A + Sbjct: 4 VGSSFLLAGQVILHLMRGRIHRRNTLDQLSAVGLESLLIVLITAVVISGVFTIQLAREFI 63 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA +++I RE+ ++TAV++AGR GSA AE+G+MK+ E+IDA+ + D Sbjct: 64 NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALLLLRTDP 123 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A + LP+LTIL+ + ++G I+ Y+I AVF + + + ++ Sbjct: 124 VDYLVIPRVLAAGLMLPVLTILSLLTGLVGGMIICASAYNISPAVFLNSAQTLLSSWDLL 183 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +KA I IV G + + +G+ T VV ++ V + + L + F Sbjct: 184 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWLLFQ 242 >gi|253991145|ref|YP_003042501.1| hypothetical protein PAU_03671 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782595|emb|CAQ85759.1| conserved hypothetical Protein [Photorhabdus asymbiotica] Length = 262 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + L +Q++ VGV + ++++ Sbjct: 6 QALAALGRRAIEVFASFGRAGFMLFGAIIGRPEPARQWPLLRQQLFSVGVQSLLIIVVSG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 66 LFIGMVLGLQGYLVLTTYSAEASLGMMVAVSLLRELGPVVTALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ I G ++V + I Sbjct: 126 KATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGICGGAMVGVDWKGIDSG 185 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ IK+ A + +A+ G+ S + + T VV + Sbjct: 186 FFWSSMQSAIEWQKDLLNCFIKSVVFAITVTWIALFNGYDAIPTSEGISQATTRTVVHAS 245 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 LAVLGLDFVLTALMFG 261 >gi|225077106|ref|ZP_03720305.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens NRL30031/H210] gi|224951663|gb|EEG32872.1| hypothetical protein NEIFLAOT_02159 [Neisseria flavescens NRL30031/H210] Length = 258 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S IRQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGFIQSLGSITLFFLHILAKSGTAFTRPRLSIRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLAKFKSADVLGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V ++ + +F Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVEWLGLDGGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVSTSEGILRASTRTVVSSSLT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFMLTAWMF 256 >gi|46143493|ref|ZP_00135103.2| COG0767: ABC-type transport system involved in resistance to organic solvents, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208757|ref|YP_001053982.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae L20] gi|307248316|ref|ZP_07530341.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307257357|ref|ZP_07539127.1| hypothetical protein appser10_13550 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259627|ref|ZP_07541351.1| hypothetical protein appser11_14250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261768|ref|ZP_07543434.1| hypothetical protein appser12_13270 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263956|ref|ZP_07545559.1| hypothetical protein appser13_13640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097549|gb|ABN74377.1| hypothetical protein APL_1291 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306855186|gb|EFM87364.1| hypothetical protein appser2_12940 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864207|gb|EFM96120.1| hypothetical protein appser10_13550 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866272|gb|EFM98136.1| hypothetical protein appser11_14250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868586|gb|EFN00397.1| hypothetical protein appser12_13270 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870718|gb|EFN02459.1| hypothetical protein appser13_13640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 234 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 69/233 (29%), Positives = 121/233 (51%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 +F+ LI+Q+Y +GV + +++L G V+ QG L F AE Sbjct: 1 MLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAET 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 L+S+ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+ Sbjct: 61 SLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIA 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR WA +IS+P+L + I G S+V + + F+S ++ +++ G IK+ Sbjct: 121 PRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKS 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A A+ +A+ G+ S + + T VV + +V+ +D + F Sbjct: 181 IIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFG 233 >gi|144898324|emb|CAM75188.1| ABC transporter permease protein [Magnetospirillum gryphiswaldense MSR-1] Length = 267 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 2/265 (0%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + L +G+ + +++ A +LG + + S+ Q Sbjct: 2 PTPNPSALLERLGRAAARGLSEFGFAATLLGQSLYWL--VLGHWRRQPVRAASVAAQAMD 59 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G++ +P++ ++S G ++A QG + L FGAE +++ +RE L+T +++AG Sbjct: 60 IGIAALPIITVLSTTIGLMLAIQGIYTLKTFGAESRVTLGVALSVVREFAPLITGILVAG 119 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSA+ A +G+M+IN+EID++ MG++ VR L++P + A+++ +PLLT+ A+ + A Sbjct: 120 RSGSALAARLGTMRINQEIDSLTVMGINPVRFLVAPPLAAMMVLMPLLTLWADLVGLFAA 179 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + I A + S L ++ GL K+ + IV + G +V + + Sbjct: 180 GLYISIELQGTMAGYADEVLSLLKLNDLLHGLAKSAIFGVLVTIVGVVNGASVSGGAEGV 239 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367 G+ T VV +IS ++I D +F Sbjct: 240 GRMTTRSVVHAISAIVITDMIFVFL 264 >gi|53720756|ref|YP_109742.1| hypothetical protein BPSL3149 [Burkholderia pseudomallei K96243] gi|53724275|ref|YP_104245.1| ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67641604|ref|ZP_00440380.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|76810397|ref|YP_335067.1| ABC transporter permease [Burkholderia pseudomallei 1710b] gi|83719902|ref|YP_443507.1| ABC transporter permease [Burkholderia thailandensis E264] gi|121601502|ref|YP_994512.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124386292|ref|YP_001027757.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126441452|ref|YP_001060680.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126450665|ref|YP_001082296.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|126451565|ref|YP_001067964.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|134283213|ref|ZP_01769914.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|167002607|ref|ZP_02268397.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167582553|ref|ZP_02375427.1| toluene tolerance ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167721498|ref|ZP_02404734.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167740468|ref|ZP_02413242.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167817681|ref|ZP_02449361.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167826076|ref|ZP_02457547.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167847585|ref|ZP_02473093.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167896161|ref|ZP_02483563.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167904546|ref|ZP_02491751.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167912808|ref|ZP_02499899.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167920767|ref|ZP_02507858.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|217424760|ref|ZP_03456257.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|226198280|ref|ZP_03793851.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237814076|ref|YP_002898527.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|242317944|ref|ZP_04816960.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254175241|ref|ZP_04881902.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254180406|ref|ZP_04887004.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254190369|ref|ZP_04896877.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254198428|ref|ZP_04904849.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254201319|ref|ZP_04907683.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei FMH] gi|254206661|ref|ZP_04913012.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei JHU] gi|254258882|ref|ZP_04949936.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|254300642|ref|ZP_04968087.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|254357286|ref|ZP_04973560.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|257137708|ref|ZP_05585970.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|52211170|emb|CAH37159.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|52427698|gb|AAU48291.1| ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76579850|gb|ABA49325.1| ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|83653727|gb|ABC37790.1| ABC transporter, permease protein [Burkholderia thailandensis E264] gi|121230312|gb|ABM52830.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124294312|gb|ABN03581.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126220945|gb|ABN84451.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126225207|gb|ABN88747.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126243535|gb|ABO06628.1| ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134245408|gb|EBA45501.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147747213|gb|EDK54289.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei FMH] gi|147752203|gb|EDK59269.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei JHU] gi|148026350|gb|EDK84435.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|157810484|gb|EDO87654.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|157938045|gb|EDO93715.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|160696286|gb|EDP86256.1| ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169655168|gb|EDS87861.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184210945|gb|EDU07988.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|217392216|gb|EEC32241.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|225929800|gb|EEH25816.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237505137|gb|ACQ97455.1| ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|238522557|gb|EEP86001.1| ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242141183|gb|EES27585.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243061712|gb|EES43898.1| toluene tolerance ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254217571|gb|EET06955.1| toluene tolerance ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 255 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + V+ + +Q++++G Sbjct: 1 MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G +++A++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + ++G +V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G+IK+ A+ +A+ +G+ + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|284039999|ref|YP_003389929.1| hypothetical protein Slin_5158 [Spirosoma linguale DSM 74] gi|283819292|gb|ADB41130.1| protein of unknown function DUF140 [Spirosoma linguale DSM 74] Length = 243 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G G + K +L +I + +GV + +V L++ GAV Q A+ L+ Sbjct: 4 IGSYFLFLGTLFRNREKLSVYLGLIINECTSIGVGSIFIVALVNIFIGAVTCVQTAYNLT 63 Query: 192 QFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + I L+ + E+ L+ +++AG+ GS I +E+G+M+I E++DA+ MG++ Sbjct: 64 NPFVPKYIIALIVRDSSILELAPTLSCIVLAGKVGSNIASELGTMRITEQVDALEVMGIN 123 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P++ A ++ PLL I+A F AI+G I I + + + Sbjct: 124 SSSYLILPKVIASVLMFPLLVIMAAFLAILGGYIAGTLAGVISAEEYVTGLRFDYKPFGV 183 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 LIK A I ++ +G+ V + +G T+ V S ++ D + Sbjct: 184 AFALIKTVVFAFLISTISAFQGYNVSGGALEVGAASTSAVTNSCIAIVAADFVLTQLLL 242 >gi|303236789|ref|ZP_07323368.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gi|302482957|gb|EFL45973.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length = 248 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + G + +F+ FL +++M +GV + +V+LISF GAVI Sbjct: 3 IINWLTNFGKYLLLMGRTFSRPERFRMFLKQYVKEMSQLGVDSIGIVLLISFFIGAVICI 62 Query: 185 QGAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + ++ + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 63 QIKLNVQSPWMPLWVSGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I LI +P L I + I+GA + + I S Sbjct: 123 LEIMGINSASYLILPKIAGLITIMPFLVIFSAAMGIVGAYATAYFAHIITPVDLTSGLQH 182 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ ++K+ F A I V+ G+ V S +GK T VV S +++ D Sbjct: 183 SFNSWFMYMSIMKSLFFAFIIASVSSYFGYTVKGGSFDVGKSSTDAVVSSSVLILFSDVF 242 Query: 364 FAIFYF 369 Sbjct: 243 LTQLLS 248 >gi|241758953|ref|ZP_04757065.1| ABC transport inner membrane subunit [Neisseria flavescens SK114] gi|241320774|gb|EER57007.1| ABC transport inner membrane subunit [Neisseria flavescens SK114] Length = 258 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + + A S IRQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGFIQSLGSITLFFLQILAKSGTAFARPRLSIRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V ++ + +F Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVEWLGLDGGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITFHYDVLNGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFMLTAWMF 256 >gi|301155764|emb|CBW15232.1| predicted toluene transporter subunit: membrane component of ABC superfamily [Haemophilus parainfluenzae T3T1] Length = 261 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 1/256 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I LG + + L++Q+Y +GV + +++L Sbjct: 6 ISSLGRSVIKFFRALGRSGFMLFGALVGKPQIRKHFPLLVKQLYALGVQSLLIILLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +I++P+L IL I G S+V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGVIAMPILAILFTAIGIWGGSLVGVDWKGVDAGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + + + +I G IK+ F A A+ +A+ G+ S + + T VV + + Sbjct: 186 WSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFAIG 372 V+ +D + F G Sbjct: 246 VLGLDFILTAIMFGAG 261 >gi|330888613|gb|EGH21274.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. mori str. 301020] Length = 230 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 126/219 (57%), Gaps = 1/219 (0%) Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 L+RQ+Y VGV + ++++ G V+A QG L+++G+E ++++ LRE+G Sbjct: 10 FQLLVRQLYSVGVMSLVIIVVSGMFIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELG 69 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA++ AGR+GSA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L + Sbjct: 70 PVVTALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAM 129 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKE 331 + + + GAS V + + F+S ++ + ++ G+IK+ A + +A+ + Sbjct: 130 IFSVVGVWGASWVAIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQ 189 Query: 332 GFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G+ S + + T VV + V+ +D + F Sbjct: 190 GYDCDPTSEGISRATTRTVVYASLAVLGLDFILTALMFG 228 >gi|296114211|ref|ZP_06832866.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC 23769] gi|295979287|gb|EFG86010.1| ABC transporter permease protein [Gluconacetobacter hansenii ATCC 23769] Length = 261 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 118/253 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G V + + + + + +G +PVV L + Sbjct: 8 IAGIGRTLLDMVRMAGQVALFGLLAVSHLVRPPFYWRTFCGSLIEIGYFSLPVVALTALF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+A+ AEIG+M++ Sbjct: 68 SGGVIALQSYTGFAQYHAQSAIAGIVILAVTRELGPVLAGLMVAGRVGAAMSAEIGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +IDA+ T+ + ++ L++PR+ A ++LP L I+A+ ++G IV + + Sbjct: 128 TNQIDALSTLSTNPIKYLVTPRLLAGTLALPFLVIIADILGVMGGFIVCVMKLNFVPQAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S ++ + ++ GL KA I ++ G+ + +G T VV + ++ Sbjct: 188 ISATIASFRMMDVTVGLAKAAIFGFLIALMGCYHGYHSRGGAEGVGAATTAAVVAASILL 247 Query: 358 IIIDSLFAIFYFA 370 + D L +F+ Sbjct: 248 LTFDYLLTDVFFS 260 >gi|311277833|ref|YP_003940064.1| hypothetical protein Entcl_0502 [Enterobacter cloacae SCF1] gi|308747028|gb|ADO46780.1| protein of unknown function DUF140 [Enterobacter cloacae SCF1] Length = 260 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTTAAFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ + ++ LIK+ A + +A+ G+ S + + T VV S Sbjct: 185 FWTAMQNAVEWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHSSL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|237730114|ref|ZP_04560595.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908720|gb|EEH94638.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 260 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ LIRQ+Y VGV + ++I+ Sbjct: 5 ALASLGHRGIKTLRTFGRAGLMLFNAVVGKPEFRKHAPLLIRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRLDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|299065474|emb|CBJ36643.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum CMR15] Length = 255 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 118/247 (47%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + L+ Q+ ++G ++ + G V+ Sbjct: 9 VRVLISRLGYATRMLLALLGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGLFVGFVLGL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+ Sbjct: 69 QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + +++PR W I++PLL + + I+G V + F+S+ + Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGIVGGYFVGVGLIGVDAGAFWSQMQAG 188 Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ G+IK+ A+ VA+ +G+ + + T VV + V+ +D + Sbjct: 189 VDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASLAVLALDFV 248 Query: 364 FAIFYFA 370 F+ Sbjct: 249 LTALMFS 255 >gi|303270959|ref|XP_003054841.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545] gi|226462815|gb|EEH60093.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545] Length = 251 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 110/226 (48%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 ++ K + I+Q+ VG + V +L S G V Q + S+ G L+ Sbjct: 26 RVVWQRKLNMAQTIQQIARVGPDTLGVAMLTSSFVGMVFTIQFCKEFSKVGLTRVIGGLL 85 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + RE+ ++ A+++AGR GSAI AE+G+M+++E++D +RT+G D V L++PR+ A Sbjct: 86 GLAFTRELTPVICAIVLAGRVGSAIAAELGTMQVSEQVDQLRTLGSDPVDYLVAPRVVAC 145 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +SLP+L++++ + + ++ Y I ++I +K Sbjct: 146 ALSLPILSVVSFTIGMAASILLADLRYGISPNAIVDSAAKYLETSDIGVMCVKGLAFGGV 205 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 I ++ G + +G+ T VV S+ + ++D ++ +F Sbjct: 206 IATISCGWGQTTTGGAKGVGESTTASVVISLVAIFVVDFFLSMIFF 251 >gi|260220241|emb|CBA27582.1| UPF0393 membrane protein HI1086 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 260 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 129/261 (49%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 +G + + D + A ++G ++++ G + Q++++G + ++ Sbjct: 7 AELGFAVRSKLADWGAGARLMGRLVASLGAVLRRPALLR-------DQIHFMGNYSLAII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V+ Q + L +FGA L+S+ +RE G +LTA++ AGR+G+++ AE Sbjct: 60 AVSGVFVGFVMGLQYYYGLQRFGAADSVGMLISLSLVREFGPVLTALLFAGRAGTSLTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG MK E++ A+ M +D V +++PR W +I++P+L + + ++G IV Sbjct: 120 IGLMKAGEQLSAMEMMAVDPVSRILAPRFWGAVIAMPILAAVFSAVGVLGGWIVSVPMIG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 I F+S+ S + ++ G+IK+ A+ +A+ +GF + + T V Sbjct: 180 IDSGAFWSQMQSGVDVWVDVGNGVIKSVVFGFAVSFIALLQGFEAQPTPEGVARATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D + F+I Sbjct: 240 VVASLTVLALDFVLTAMMFSI 260 >gi|238023142|ref|ZP_04603568.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147] gi|237865525|gb|EEP66665.1| hypothetical protein GCWU000324_03068 [Kingella oralis ATCC 51147] Length = 257 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + LG + + IRQMY+ GV V ++ + Sbjct: 4 IQSTGAKTLAFIQTLGANALFLLKILLLLPQTLLRARLTIRQMYFSGVLSVLIIAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G VI QG QL++F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVIGLQGYTQLAKFKSADVLGFMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA ++S+PLL + N + I G +V ++ + VF Sbjct: 124 TEQLEAMDVMAVNPVARVVAPRFWAGVVSMPLLACIFNVAGIYGGYLVGVQWLGLDTGVF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + + ++F GL K+ A+ ++A+ +GF + + + T VV S Sbjct: 184 WSNMQNNIDWSYDVFNGLTKSLIFGSAVALIAVYQGFHCTPTAEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 V+ +D + F F Sbjct: 244 VLALDFILTAFMF 256 >gi|308814916|dbj|BAJ22980.1| L-glutamate ABC transporter [Neisseria meningitidis] Length = 258 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGMF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGIVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|161869245|ref|YP_001598412.1| putative ABC transport system permease protein [Neisseria meningitidis 053442] gi|304388521|ref|ZP_07370624.1| ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] gi|161594798|gb|ABX72458.1| putative ABC transport system permease protein [Neisseria meningitidis 053442] gi|304337518|gb|EFM03684.1| ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] Length = 258 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGARTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVTWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|290476800|ref|YP_003469711.1| putative ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289176144|emb|CBJ82949.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 262 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + A G + L +Q+Y VGV + ++++ Sbjct: 6 RALAALGKRAIEVAASFGRAGFMLFSAIIGKPELAKQWKLLCQQLYSVGVQSLLIIVVSG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V++ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 66 LFIGMVLSLQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +I+PR WA IS+PLL+++ IIG +IV + I Sbjct: 126 KATEQISSLEMMAIDPLRRVIAPRFWAGFISMPLLSLIFVAVGIIGGAIVGVDWKGIDAG 185 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ +K+ A + +A+ G+ S + + T VV + Sbjct: 186 FFWSSMQSAVDWQKDLLNCFLKSVAFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 LAVLGLDFVLTALMFG 261 >gi|134096234|ref|YP_001101309.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans] gi|133740137|emb|CAL63188.1| ABC transporter, permease protein [Herminiimonas arsenicoxydans] Length = 259 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 133/265 (50%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + IG+ + +F+ + I +I +G +I Q++++G Sbjct: 2 IAAVLTAIGRGVREFVTNLGFATRIFFKIIGVSGGLLRRPQ-------LVISQIHFIGNY 54 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+ Sbjct: 55 SLVLIAVSGLFVGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGT 114 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ AEIG MK E++ A+ M ++ ++ +++PR WA ++++P+L + + IIG IV Sbjct: 115 SLTAEIGLMKAGEQLSAMEMMAVNPLQRVLAPRFWAGVVAMPVLAAIFSAIGIIGGYIVG 174 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 K + F+S+ + ++ G+IK+ A+ VA+ +G+ + + Sbjct: 175 VKMIGVDEGAFWSQMQGGVDVWDDVLNGVIKSVVFGFAVTFVALYQGYQAQPTPEGVARA 234 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D L F+ Sbjct: 235 TTRTVVIASLSVLWLDFLLTALMFS 259 >gi|298369697|ref|ZP_06981014.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282254|gb|EFI23742.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] Length = 258 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + S IRQ+Y+ GV V ++ + Sbjct: 4 IRTVGAKTLDFIQSLGSITLFLLRILTKSATAFTRPRLSIRQVYFSGVMSVLIIAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M +D V +++PR WA + S+PLL + N + I GA +V ++ + +F Sbjct: 124 TEQLEAMNVMAVDPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQWLGLDGGIF 183 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +++ + + ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WAQMQNNISFGYDVANGLIKSAAFGTAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFVLTAWMF 256 >gi|261415153|ref|YP_003248836.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371609|gb|ACX74354.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325884|gb|ADL25085.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 260 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 114/248 (45%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 +G I ++++M VGVS +P++ + S TG V Sbjct: 12 GQKIVDAIAAVGECICILFITLKQFRYVHKNPSLIVKEMISVGVSSLPLLFVTSIFTGMV 71 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 F+ ++ F + L E+G LLTA++++GR GSA+ AE+GSMK EE+ Sbjct: 72 ATIMAEFEFHNLVSDKFVGTAACKMVLIELGPLLTAIVLSGRVGSAVAAELGSMKEKEEL 131 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A +GLD R L PR +A + +P LT ++N A+IG IV DI + + Sbjct: 132 SAYVVLGLDPYRYLAMPRFFAFLTMIPCLTAISNALALIGGWIVCVLALDITTYTYSTGM 191 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +++ G+IK+ I ++A G ++ +G + VV S ++++ D Sbjct: 192 QYLFSNMDLWAGIIKSIVFGTIIFVLAYYHGTHSKPGAHGVGLATMSVVVASCLMILVSD 251 Query: 362 SLFAIFYF 369 + F F Sbjct: 252 FILDAFMF 259 >gi|171462919|ref|YP_001797032.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192457|gb|ACB43418.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 262 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 5/259 (1%) Query: 117 KIVKFINDSCSQ----AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 ++ D LGL S +I Q+ +VG ++ Sbjct: 3 ALLNLFGDLGFFIRRNLSSLGLAARMLVAVVFRSGFLLKRPRLVIDQILFVGNHSFVIIA 62 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+++ AEI Sbjct: 63 VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLTRELGPVITALLFAGRAGTSLTAEI 122 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G MK E++ A+ M +D + +I+PR+WA IIS+P+L + I+G +V + Sbjct: 123 GLMKAGEQLTAMEMMAVDPLGRVIAPRLWAGIISMPILATIFTAVGILGGYLVGVPLIGV 182 Query: 293 PFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ ++ GLIK+ A+ +A+ +G+ + + T VV Sbjct: 183 DSGAFWSQMQGGVDLFSDTGNGLIKSMVYGVAVTFIALYQGYESRPTPEGVSQATTRTVV 242 Query: 352 QSISIVIIIDSLFAIFYFA 370 S V+ +D L F+ Sbjct: 243 ISSLSVLALDFLLTAMMFS 261 >gi|16762074|ref|NP_457691.1| hypothetical protein STY3491 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766607|ref|NP_462222.1| transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143563|ref|NP_806905.1| hypothetical protein t3229 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415241|ref|YP_152316.1| hypothetical protein SPA3179 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181820|ref|YP_218237.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616322|ref|YP_001590287.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552038|ref|ZP_02345791.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994505|ref|ZP_02575596.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231923|ref|ZP_02656981.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238014|ref|ZP_02663072.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243148|ref|ZP_02668080.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262675|ref|ZP_02684648.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463462|ref|ZP_02697379.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819618|ref|ZP_02831618.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443328|ref|YP_002042570.1| toluene ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449369|ref|YP_002047341.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470890|ref|ZP_03076874.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737604|ref|YP_002116262.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251770|ref|YP_002148237.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262344|ref|ZP_03162418.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364171|ref|YP_002143808.1| hypothetical protein SSPA2967 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200388463|ref|ZP_03215075.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931189|ref|ZP_03221983.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354213|ref|YP_002228014.1| hypothetical protein SG3202 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858560|ref|YP_002245211.1| hypothetical protein SEN3145 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163395|ref|ZP_03349105.1| hypothetical protein Salmoneentericaenterica_26575 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213420406|ref|ZP_03353472.1| hypothetical protein Salmonentericaenterica_22736 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426645|ref|ZP_03359395.1| hypothetical protein SentesTyphi_14148 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213618602|ref|ZP_03372428.1| hypothetical protein SentesTyp_19883 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646981|ref|ZP_03377034.1| hypothetical protein SentesTy_06536 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857745|ref|ZP_03384716.1| hypothetical protein SentesT_21720 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585109|ref|YP_002638908.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910106|ref|ZP_04653943.1| hypothetical protein SentesTe_03070 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825822|ref|ZP_06544990.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25319166|pir||AG0904 probable membrane protein STY3491 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421869|gb|AAL22181.1| putative ABC superfamily transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504377|emb|CAD07829.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139198|gb|AAO70765.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129498|gb|AAV79004.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129453|gb|AAX67156.1| putative ABC superfamily (membr) transport protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365686|gb|ABX69454.1| hypothetical protein SPAB_04130 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401991|gb|ACF62213.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407673|gb|ACF67892.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457254|gb|EDX46093.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713106|gb|ACF92327.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633368|gb|EDX51782.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095648|emb|CAR61216.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215473|gb|ACH52870.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240599|gb|EDY23219.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289146|gb|EDY28515.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199605561|gb|EDZ04106.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204319956|gb|EDZ05162.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273994|emb|CAR39000.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323252|gb|EDZ11091.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327645|gb|EDZ14409.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333943|gb|EDZ20707.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337808|gb|EDZ24572.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343404|gb|EDZ30168.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348318|gb|EDZ34949.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710363|emb|CAR34721.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469637|gb|ACN47467.1| hypothetical protein SPC_3382 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248477|emb|CBG26314.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995511|gb|ACY90396.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159861|emb|CBW19380.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914339|dbj|BAJ38313.1| toluene ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087757|emb|CBY97521.1| UPF0393 inner membrane protein yrbE [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225264|gb|EFX50323.1| Uncharacterized ABC transporter, permease component YrbE [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615316|gb|EFY12237.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618325|gb|EFY15216.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622870|gb|EFY19714.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626808|gb|EFY23605.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631377|gb|EFY28137.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635356|gb|EFY32070.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643355|gb|EFY39919.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647073|gb|EFY43574.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648876|gb|EFY45321.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655068|gb|EFY51379.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657671|gb|EFY53939.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664167|gb|EFY60365.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667450|gb|EFY63612.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674698|gb|EFY70790.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675669|gb|EFY71742.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682305|gb|EFY78328.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684908|gb|EFY80906.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716309|gb|EFZ07880.1| putative phospholipid ABC transporter permease protein mlaE [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131672|gb|ADX19102.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195887|gb|EFZ81058.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199004|gb|EFZ84101.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204296|gb|EFZ89305.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207643|gb|EFZ92590.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211304|gb|EFZ96148.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214754|gb|EFZ99503.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221234|gb|EGA05660.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224025|gb|EGA08318.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230326|gb|EGA14445.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233302|gb|EGA17396.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239339|gb|EGA23389.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242410|gb|EGA26436.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246920|gb|EGA30886.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254147|gb|EGA37967.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255264|gb|EGA39041.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262727|gb|EGA46283.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264037|gb|EGA47545.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269423|gb|EGA52878.1| toluene transporter subunit: membrane component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625062|gb|EGE31407.1| putative phospholipid ABC transporter permease protein mlaE [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629335|gb|EGE35678.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 260 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|167587707|ref|ZP_02380095.1| hypothetical protein BuboB_20349 [Burkholderia ubonensis Bu] Length = 255 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + A + ++ + +Q++++G Sbjct: 1 MISAIGRFVIGGLVRAGYGARMFVRLVLEFFPLLRRP-------RLVTKQIHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+W II++PLL + N ++G V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPIKTVIAPRMWGGIITMPLLAAIFNAVGVLGGYFVGVIL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + + T Sbjct: 174 IGVDSGAFWSQMQGGVQVWADVGNGVLKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVFASLAVLGLDFLLTALMFS 255 >gi|86606727|ref|YP_475490.1| hypothetical protein CYA_2087 [Synechococcus sp. JA-3-3Ab] gi|86555269|gb|ABD00227.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 255 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 117/236 (49%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G G+ + + + + Q+ VG+ + +V++ + V V Q A + Sbjct: 7 VGSSFLLAGQVTLHLLRGRIHRRNTLEQLAAVGLESLLIVLITAVVISGVFTIQLAREFI 66 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 FGA +++I RE+ ++TAV++AGR GSA AE+G+MK+ E+IDA+ + D Sbjct: 67 NFGASSLIGGVLAIALARELTPVVTAVILAGRVGSAFAAELGTMKVTEQIDALYLLRTDP 126 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A + LP+LTIL+ + ++G I+ Y+IP VF + + ++ Sbjct: 127 VDYLVIPRVVAAGLMLPVLTILSLLTGLVGGMIICASVYNIPSTVFLTSAQNLLAPWDLI 186 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +KA I IV G + + +G+ T VV ++ V + + L + Sbjct: 187 VCCLKAMVFGSLIAIVGSNWGLSTSGGAKGVGRSTTDAVVTALLGVFVTNFLISWL 242 >gi|296135334|ref|YP_003642576.1| protein of unknown function DUF140 [Thiomonas intermedia K12] gi|295795456|gb|ADG30246.1| protein of unknown function DUF140 [Thiomonas intermedia K12] Length = 261 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++V + LG + LI+QMY++G + ++ + Sbjct: 6 RLVSIGVGTRQLLSSLGYAARLFVRLLWLVGRVFMRPSLLIQQMYFLGNLSLVIIAVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG + LS++G+ L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 66 FVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E+I A+ M +D V +++PR WA +I +PLL + + I+G +V + Sbjct: 126 AGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVGVVMIGVDAGQ 185 Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ S ++ G+IK+ A+ VA+ +G+ + + T VV + Sbjct: 186 FWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRATTRTVVIASL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F+ Sbjct: 246 AVLALDFVLTAMMFS 260 >gi|269137863|ref|YP_003294563.1| putative transport protein [Edwardsiella tarda EIB202] gi|267983523|gb|ACY83352.1| putative transport protein [Edwardsiella tarda EIB202] gi|304557916|gb|ADM40580.1| hypothetical protein ETAF_0456 [Edwardsiella tarda FL6-60] Length = 260 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + F G + L RQ+Y VGV + ++I+ Sbjct: 5 GLAAFGRRGIRVCAAFGRAGLMLFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 65 FIGMVLGLQGYLVLTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMK 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +++PR WA +IS+PLLT++ I G S+V + I Sbjct: 125 ATEQLSSLEMMAVDPLRRVVAPRFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGF 184 Query: 297 FFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSAMQGAVDYRTDLLNCLIKSLVFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|269128543|ref|YP_003301913.1| hypothetical protein Tcur_4348 [Thermomonospora curvata DSM 43183] gi|268313501|gb|ACY99875.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 285 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 111/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + +K I Q +++ +L++ GA+++ Q + Q Sbjct: 41 GRFFALCLDAFRAMFKRPLQWREFIEQAWFIVSVTAIPTMLVAIPFGAILSLQVGGLIRQ 100 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +RE L+TA++IAG +GSA+ A+IGS KI EEIDA+ +G++ + Sbjct: 101 LGAQSFTGATAVVAIVREASPLVTALLIAGAAGSAMCADIGSRKIREEIDAMEVLGINPL 160 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+WA L L + ++G D + + F++ A L ++ Sbjct: 161 HRLVVPRMWACAFIGLFLNGLVSVVGLVGGYFFNVVLQDGTPGAYLASFNAMAQLPDLIQ 220 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +KA G+VA +G +G V VV + ++ + + + + YF + Sbjct: 221 AEVKAFIFGLTAGLVAAYKGLNAKGGPKGVGDAVNQTVVITFMLLFVENFVISALYFQL 279 >gi|294669772|ref|ZP_06734838.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308338|gb|EFE49581.1| hypothetical protein NEIELOOT_01672 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 258 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG V + A S +RQ+Y+ GV V ++ + Sbjct: 4 IRTVGAKTLGFIQALGSVCLFLLQILAHSGTSLLRFRLSVRQVYFAGVLSVLIIAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKA 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V ++ + +F Sbjct: 124 TEQLEAMNVMAINPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVQWLGLDGGIF 183 Query: 298 FSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + + ++ GLIK+ F A+ ++A+ +GF S + + T VV S + Sbjct: 184 WSQMQNNISFGYDVLNGLIKSAFFGVAVTLIAVHQGFHALPTSEGILRASTRTVVSSALV 243 Query: 357 VIIIDSLFAIFYF 369 V+ ID + F F Sbjct: 244 VLAIDFILTAFMF 256 >gi|33240854|ref|NP_875796.1| putative transporter, membrane component [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238383|gb|AAQ00449.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 248 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 112/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ S+ K + LI Q+ G + +V++ G V Q A +LS Sbjct: 10 LGSSCIIGGQAVTSTTKGRFNKADLIDQLMEAGPASFLIVLITGVSAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G L++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGLGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLKTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ PL +L A+ + +Y IP VF++ L ++ Sbjct: 130 VEYLVVPRLIAMVVMAPLQCLLFFSVALWSGQVSSTAFYSIPPNVFWNSVKEWIVLTDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I ++A G + +G T VV ++ V ++D + F+ Sbjct: 190 FMLIKAVVFGLQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLTVSLMDVVLTKVLFS 248 >gi|332178184|gb|AEE13873.1| protein of unknown function DUF140 [Thermodesulfobium narugense DSM 14796] Length = 250 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 120/246 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + + + + Q + +GV VP+V + S G V A Sbjct: 4 FIEFFSDVGQLSYLFFRSIVAVLTARFRFFLFLDQCFMIGVESVPIVFITSLFVGMVFAI 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A + +GA ++ I +RE+G ++T V++AGR GSA+ AEIG+MK+ E+IDA+ Sbjct: 64 QTAREFVFYGAGSVVGGVVGIAIIRELGPMITGVVVAGRVGSAMAAEIGTMKVTEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +M +D + L++PR++A ++ LPLLT++AN + +IG V Y + + F Sbjct: 124 LSMSVDPIFYLVAPRVFACMLMLPLLTVIANLAGVIGGYFVAVYYGGVIPSSFVESVRFL 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +I LIKA I ++ G + +G VV S+ ++ I + Sbjct: 184 VKVWDIEASLIKAMIFGSIISLIGTFIGLRTKAGARGVGNSTMLSVVISLILIFIFNYFL 243 Query: 365 AIFYFA 370 ++ F+ Sbjct: 244 SMVMFS 249 >gi|329957353|ref|ZP_08297873.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT 12056] gi|328523066|gb|EGF50169.1| hypothetical protein HMPREF9445_02751 [Bacteroides clarus YIT 12056] Length = 247 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|78213612|ref|YP_382391.1| hypothetical protein Syncc9605_2096 [Synechococcus sp. CC9605] gi|78198071|gb|ABB35836.1| Protein of unknown function DUF140 [Synechococcus sp. CC9605] Length = 249 Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 115/239 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + L+ Q+ G V +V++IS G+V Q A +L+ Sbjct: 10 LGASLLIGGQAVAATLRGRIDRGELLEQLLDAGPGSVLIVLIISVAAGSVFNIQVAAELT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA +++I REI LLT+ ++AG+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILAIGLAREIAPLLTSCLLAGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ A+ + Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRMIAMVVMAPVQCFFFFLVAVWSGQLTSTALYNIPPAVFWTSVRTWMAPLDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I VA G +G T VV + +V ++D + F Sbjct: 190 FMLVKAVVFGMIIATVACGWGLTTRGGPKEVGTSTTGAVVMILILVALMDVVLTQVLFG 248 >gi|300724964|ref|YP_003714289.1| putative ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297631506|emb|CBJ92213.1| putative transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 262 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G + L L +Q+Y VGV + ++++ Sbjct: 6 RALAVLGRRAIEVTASFGRAGFMLFSAIIGKPEPAKQWLLLRQQLYSVGVQSLLIIVVSG 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG M Sbjct: 66 LFIGMVLALQGYLVLTTFSAEGSLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLM 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E+I ++ M +D +R +++PR WA IS+PLLT++ I+G +IV + I Sbjct: 126 KATEQISSLEMMAVDPLRRVVAPRFWAGFISMPLLTLIFVAVGILGGAIVGVDWKGIDAG 185 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S S ++ +K+ A + +A+ G+ S + + T VV + Sbjct: 186 FFWSSMQSAVEWKKDLLNCFLKSVVFAITVTWIALFNGYDAIPTSEGISRATTRTVVHAS 245 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 246 LAVLGLDFVLTALMFG 261 >gi|261378129|ref|ZP_05982702.1| toluene tolerance ABC efflux transporter, permease [Neisseria cinerea ATCC 14685] gi|269145589|gb|EEZ72007.1| toluene tolerance ABC efflux transporter, permease [Neisseria cinerea ATCC 14685] Length = 258 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + LG + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGFIQSLGSITLFLLNILAKSGTAFVRPCLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCVPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ ID + + F Sbjct: 244 ILAIDFVLTAWMF 256 >gi|162146934|ref|YP_001601395.1| hypothetical protein GDI_1139 [Gluconacetobacter diazotrophicus PAl 5] gi|209543998|ref|YP_002276227.1| hypothetical protein Gdia_1852 [Gluconacetobacter diazotrophicus PAl 5] gi|161785511|emb|CAP55082.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531675|gb|ACI51612.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 261 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 118/253 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + + G + + + + + + +G +PVV L + Sbjct: 8 IAALGRAALNLVRTAGALTLFGAQALSHLVRPPFYWRIFFGALVEIGFFSLPVVALTALF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G VIA Q +Q+ + ++ + RE+G +L +M+AGR G+A+ AEIG+M++ Sbjct: 68 SGGVIALQSYTGFAQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAEIGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ + ++ L++PR+ A ++LP L ++A+ ++G V D V+ Sbjct: 128 TDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVLGGFTVSVAKLDFSAPVY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + + ++ GL+KA I ++ G+ + +G T VV + ++ Sbjct: 188 IAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGAATTAAVVAASILL 247 Query: 358 IIIDSLFAIFYFA 370 + D L +F+ Sbjct: 248 LASDYLLTDVFFS 260 >gi|325104961|ref|YP_004274615.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] gi|324973809|gb|ADY52793.1| protein of unknown function DUF140 [Pedobacter saltans DSM 12145] Length = 244 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G I KF + + ++M Y+G+ + ++ +IS GAV+ Q A Sbjct: 2 FFSYFGKYILLLKAVFRKPEKFSLYWKEIAKEMVYIGIGSLALISIISVFVGAVMTLQIA 61 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL S F + + + E+ + A+++AG+ GS+I +EIG+M++ E+IDA+ Sbjct: 62 FQLVSDFIPKTIVGSVNRDSAILELSPTICALVLAGKIGSSISSEIGTMRVTEQIDALEI 121 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A I +P+L ++ F A++G + + + + + Sbjct: 122 MGINAPGYLILPKIIAGITMIPILVYISIFLALLGGYVGGVASGVVSSSDYIQGITTGFI 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +KA I VA +GF V + +GK T VV S ++ D + Sbjct: 182 PYTMAVAGVKAFIFGFIITSVASYQGFYVNGGALEVGKAGTKTVVISCIAILSADYIITE 241 Query: 367 F 367 Sbjct: 242 L 242 >gi|17547680|ref|NP_521082.1| hypothetical protein RSc2961 [Ralstonia solanacearum GMI1000] gi|17429984|emb|CAD16668.1| putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein [Ralstonia solanacearum GMI1000] Length = 255 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 118/247 (47%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + L+ Q+ ++G ++ + G V+ Sbjct: 9 VRILISRLGYATRMLLALIGAGRDVLRRPRLLVEQLRFIGNDSFIIIAVSGLFVGFVLGL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+ Sbjct: 69 QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + +++PR W I++PLL + + I+G V + F+S+ + Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGILGGYFVGVGLIGVDAGAFWSQMQAG 188 Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ G+IK+ A+ VA+ +G+ + + T VV + V+ +D + Sbjct: 189 VDVVKDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVSRATTRTVVIASLAVLALDFV 248 Query: 364 FAIFYFA 370 F+ Sbjct: 249 LTALMFS 255 >gi|218128442|ref|ZP_03457246.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697] gi|317475731|ref|ZP_07934990.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii 1_2_48FAA] gi|217989333|gb|EEC55646.1| hypothetical protein BACEGG_00010 [Bacteroides eggerthii DSM 20697] gi|316908114|gb|EFV29809.1| hypothetical protein HMPREF1016_01972 [Bacteroides eggerthii 1_2_48FAA] Length = 247 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGKYIMLMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|307150966|ref|YP_003886350.1| hypothetical protein Cyan7822_1067 [Cyanothece sp. PCC 7822] gi|306981194|gb|ADN13075.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7822] Length = 266 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 1/238 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L I TG + K + + QM VG + + + ++ + V G + Q A + Sbjct: 18 LWAAILLTGRVVFYLFTRKIDARNTLEQMMAVGPASLAIALITATVIGMIFTIQVAREFL 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA ++++ RE+ ++ AV++AGR GSA AEIG+M++ E+IDA+ + D Sbjct: 78 ALGAGSAVGGILALALSRELCPIMMAVVVAGRVGSAFAAEIGTMRVTEQIDALYMLNADP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A I +P LT+LA + + G ++I Y VF + + ++ Sbjct: 138 VEYLVIPRVVACCIMVPALTVLALITGLAGGLLMIRFYGIAD-TVFLESIQNFVRVWDVI 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 G IK C I I+ G + +G+ T VV + + I + + + F Sbjct: 197 CGPIKGIVFGCLIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFIANFILSWIMF 254 >gi|148240268|ref|YP_001225655.1| ABC-type transport system, permease component [Synechococcus sp. WH 7803] gi|147848807|emb|CAK24358.1| ABC-type transport system, permease component [Synechococcus sp. WH 7803] Length = 257 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 112/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L+ Q+ G +VI+ S G V Q +LS Sbjct: 19 LGSSLIIGGQAVTATARGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELS 78 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA+ ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 79 SMGADATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 138 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L AI A I + Y IP VF+ S +I Sbjct: 139 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTELYAIPPEVFWMSVRSWLLPDDIP 198 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I +++ G +G T VV + V ++D++ F Sbjct: 199 FMLIKALVFGLQIAVLSCGWGMTTQGGPKEVGTSTTGAVVMILVTVALMDTVLTQILFG 257 >gi|167765445|ref|ZP_02437558.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC 43183] gi|167697073|gb|EDS13652.1| hypothetical protein BACSTE_03835 [Bacteroides stercoris ATCC 43183] Length = 247 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIILMGRVFARPERMRMFFRQYINEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVSTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G++V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYSVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|110680422|ref|YP_683429.1| hypothetical protein RD1_3241 [Roseobacter denitrificans OCh 114] gi|109456538|gb|ABG32743.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 257 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 107/250 (42%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 S +G + G+ + + Q+ +G +PVV L + TG Sbjct: 8 GRVVLSALAAIGRIAIFGGQTIGHLARPPFYAREFATQLLNIGWLSLPVVGLTAVFTGGA 67 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q S+F AE ++++ +RE+G +L +MIA R S+I AEI +MK+ E+I Sbjct: 68 LALQIYAGGSRFNAEAVVPQIVAVGMVRELGPVLVGLMIAARVTSSIAAEIATMKVTEQI 127 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ ++ L PR+ A ++ +PLL + + I G V A + + Sbjct: 128 DALVTLSTHPMKYLTVPRVLAAVLVVPLLVAVGDIIGIFGGFAVATGTLGFNAATYINNT 187 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ + L K ++ G G + +G+ V + +++ + Sbjct: 188 VNFLEPLDVISSLTKGAVFGFCAALMGCYHGMNSGRGAMGVGRATKGAVEGAAVLILAAN 247 Query: 362 SLFAIFYFAI 371 + +F + Sbjct: 248 FVLTGVFFTL 257 >gi|198242766|ref|YP_002217283.1| toluene ABC transporter permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937282|gb|ACH74615.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 260 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G S+V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWSVMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|297172194|gb|ADI23174.1| ABC-type transport system involved in resistance to organic solvents, permease component [uncultured gamma proteobacterium HF0770_11A05] Length = 220 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 65/217 (29%), Positives = 113/217 (52%) Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 + Q++++GV VV+L TG V+ Q Q + + + + ++ RE+G + T Sbjct: 1 MEQLHFIGVKSQSVVLLTGAFTGMVMCAQFYIQFHKVKMDSAVMSVXTVXMXRELGAVXT 60 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +MIAGR G+A+ A++G+MK+ E+IDA+RT+ V L++PR+ A++ISLPLLT A Sbjct: 61 XLMIAGRVGAAMAAQLGTMKVTEQIDALRTLATSPVDYLVAPRLLAMLISLPLLTAEAIA 120 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +++ +V + +S +I+ GLIKA A I VA +G G Sbjct: 121 ISMVSGMLVAVYLLGLDPVFLWSNMVFYTGSVDIWMGLIKAFIFAGIIATVACHKGMHCG 180 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + +GK T VV + +++ + + + I Sbjct: 181 QGAEGVGKATTEAVVAASISILVSNFFVTLVLNNLLI 217 >gi|255014836|ref|ZP_05286962.1| ABC transporter permease [Bacteroides sp. 2_1_7] Length = 241 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + ++ F LI+++Y +GV + +VI+IS G VIA Q + +S Sbjct: 1 MGEYTLLMMKSITLPDRWSMFFKQLIKEIYKLGVDSLWIVIIISVFIGTVIAIQISLNIS 60 Query: 192 QFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + A+++AG+ GS I +EIG+M++ E+IDA+ MG++ Sbjct: 61 SPLIPKFTIGYTTREIILLEFSSSIMALILAGKVGSNIASEIGTMRVTEQIDAMEIMGVN 120 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTATLAN 309 LI P++ L+I +P+L I + F+ I+G + + + F Sbjct: 121 SANFLILPKMLGLMIFIPVLVIFSMFTGIMGGIFASYSTSTGMTPSSFEYGLQFYFNEFY 180 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 181 IWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 236 >gi|224535957|ref|ZP_03676496.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus DSM 14838] gi|224522412|gb|EEF91517.1| hypothetical protein BACCELL_00821 [Bacteroides cellulosilyticus DSM 14838] Length = 247 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F I +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALKTVGRYIMLMGRTFARPERMRMFFRQYINEMGQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I+A++ ++P L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIFAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|194290964|ref|YP_002006871.1| hypothetical protein RALTA_A2885 [Cupriavidus taiwanensis LMG 19424] gi|193224799|emb|CAQ70810.1| conserved hypothetical protein, DUF140; Putative abc-type transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 259 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 123/252 (48%), Gaps = 1/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 LG A S + Q+++VG + ++ + G Sbjct: 7 AIGAAVRRSISGLGHATRMFLAVLALSPALLRRFRLVTDQVFFVGNLSLVIIAVSGLFVG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK E Sbjct: 67 FVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M ++ ++ +++PR WA +I++P+L + + I+G +V + + F+S Sbjct: 127 QLTAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGILGGYVVGVQLIGVDAGAFWS 186 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + ++ G+IK+ A+ +A+ +GF + + T VV + V+ Sbjct: 187 QMQGGVDVRADVLNGVIKSFIFGIAVTFIALYQGFEARPTPEGVSRATTRTVVIASLAVL 246 Query: 359 IIDSLFAIFYFA 370 +D L F+ Sbjct: 247 GLDFLLTALMFS 258 >gi|189463681|ref|ZP_03012466.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM 17393] gi|189438631|gb|EDV07616.1| hypothetical protein BACINT_00012 [Bacteroides intestinalis DSM 17393] Length = 247 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F + +M +GV+ + +V+LISF GAVI Sbjct: 1 MIKALKTVGRYIMLMGRTFARPERMRMFFRQYLNEMGQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++P L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKICAMVTTIPFLVTFSIFAGIIGAFATCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|329913017|ref|ZP_08275865.1| putative transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] gi|327545454|gb|EGF30661.1| putative transport protein (ABC superfamily, membrane) [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + + +G +S + Q+++VG + ++ + Sbjct: 4 WIAALGSRVTGFLYQIGYAARAFLAILRASAGLWRRPRLITDQIHFVGNYSLVIIAVSGL 63 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 64 FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK 123 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ A+ M +D ++ +++PR WA +I++P+L + + I+G +V + I Sbjct: 124 AGEQLSAMEMMAVDPIQRVLAPRFWAGVIAMPVLAAIFSAVGIVGGYVVGVQMIGIDEGA 183 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ + +I G++K+ A+ +A+ +G+ + + T VV Sbjct: 184 FWSQMQGGVDVWQDIANGVLKSFVFGIAVTFIALFQGYEAQPTPEGVARATTRTVVIGSL 243 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D L F Sbjct: 244 TVLWLDFLMTALMFN 258 >gi|56417212|ref|YP_154286.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries] gi|222475576|ref|YP_002563993.1| hypothetical protein AMF_912 [Anaplasma marginale str. Florida] gi|254995379|ref|ZP_05277569.1| hypothetical protein AmarM_05554 [Anaplasma marginale str. Mississippi] gi|255003566|ref|ZP_05278530.1| hypothetical protein AmarPR_05019 [Anaplasma marginale str. Puerto Rico] gi|255004692|ref|ZP_05279493.1| hypothetical protein AmarV_05379 [Anaplasma marginale str. Virginia] gi|56388444|gb|AAV87031.1| hypothetical protein AM1212 [Anaplasma marginale str. St. Maries] gi|222419714|gb|ACM49737.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 259 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 112/250 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +G + + A + RQ + + +P+V + + TG Sbjct: 10 AVGRYFIGLVVPVGRMSIFCAKSVALGALPPYYFPIAARQFFEMWFFSLPIVGMTALFTG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 + Q A F ++++ +RE+G +L +++AGR G+A+ AEIG+M+I E Sbjct: 70 GALVLQDTLVGGGKVAAHFMAGIVTVAIVRELGPVLIGLIVAGRVGAAVAAEIGTMRITE 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ D + L++PR+ AL++++P+L I +F I G V + Sbjct: 130 QIDALDTLEADPFQYLVAPRVIALMVAMPVLIIYTDFLGIFGGYAVGTLGLGYNPNEYIG 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ GL+KA I +V G+ + +G T VV S ++++ Sbjct: 190 GVAEFLRFKDVTEGLVKAVSFGFVIAMVGCYSGYYCSGGARGVGAATTNTVVSSSMLIVL 249 Query: 360 IDSLFAIFYF 369 ++ + +FY Sbjct: 250 LNYVITVFYA 259 >gi|319900088|ref|YP_004159816.1| hypothetical protein Bache_0200 [Bacteroides helcogenes P 36-108] gi|319415119|gb|ADV42230.1| protein of unknown function DUF140 [Bacteroides helcogenes P 36-108] Length = 247 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIILMGRVFARPERMRMFFRQYLNEVEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I AL+ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKISALVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 T I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 TFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|73542805|ref|YP_297325.1| hypothetical protein Reut_A3121 [Ralstonia eutropha JMP134] gi|72120218|gb|AAZ62481.1| Protein of unknown function DUF140 [Ralstonia eutropha JMP134] Length = 258 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 124/252 (49%), Gaps = 1/252 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + LG S + Q+++VG + ++ + G Sbjct: 7 AIGSAVRQGVAGLGHAAGMFFTVLGLSPALLRRFRLVTDQIFFVGNLSLVIIAVSGLFVG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK E Sbjct: 67 FVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVITALLFAGRAGTSLTAEIGLMKAGE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M ++ ++ +I+PR WA ++++P+L + + ++G +V + + F+S Sbjct: 127 QLTAMEMMAVNPLQRVIAPRFWAGVVAMPVLAAIFSAVGVLGGYLVGVQLIGVDAGAFWS 186 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + + ++ G+IK+ A+ +A+ +GF + + T VV + V+ Sbjct: 187 QMQAGVDVRDDVVNGVIKSFIFGIAVTFIALYQGFEAKPTPEGVSRATTRTVVIASLAVL 246 Query: 359 IIDSLFAIFYFA 370 +D L F+ Sbjct: 247 GLDFLLTALMFS 258 >gi|291613160|ref|YP_003523317.1| hypothetical protein Slit_0691 [Sideroxydans lithotrophicus ES-1] gi|291583272|gb|ADE10930.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus ES-1] Length = 262 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 132/266 (49%), Gaps = 8/266 (3%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 + + IGK++V I + A + + +G +R++++ GV Sbjct: 2 AIVSGLRGIGKRVVNAIWRTGYGARFFLMTLLYSGMSFKR-------FRLTVREIFFSGV 54 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G V+ QG L ++G+E L+++ +RE+G +L A++ A R+G Sbjct: 55 MSLIIILVAGMFVGMVLGLQGYETLKRYGSESALGSLVALSLVRELGPVLAALLFASRAG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I A+ M ++ + +++PR WA +IS+PLL L + + G +V Sbjct: 115 SAMTAEIGLMKATEQISAMELMAVNPIARVVAPRFWAGVISMPLLAALFSAMGVFGGYVV 174 Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+S+ ++ +I G+IK+ A+ +A+ EG+ + + Sbjct: 175 GVVNIGVDEGSFWSQMQASVDFQHDILNGVIKSLVFGLAVTAIALFEGYDAPPTAEGVSG 234 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV+S ++++D + F F Sbjct: 235 ATTRTVVESSLAILMLDFILTAFMFQ 260 >gi|145219305|ref|YP_001130014.1| hypothetical protein Cvib_0490 [Prosthecochloris vibrioformis DSM 265] gi|145205469|gb|ABP36512.1| protein of unknown function DUF140 [Chlorobium phaeovibrioides DSM 265] Length = 264 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 116/248 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + K + + + Q G +P+V++ + G Sbjct: 12 DLVYRLKDFFLTMQDFFLFGVRSFLTIPKIRRYWRDFLDQAKICGADSIPIVLVSAISIG 71 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +++A + L FGA+ SI +RE+G LL +M++ R GS AE+G+MKI+E Sbjct: 72 SLLAIEVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMKISE 131 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+R G D + L+ PR+ A +I LT L++F+ + A+ + Y+ + +F++ Sbjct: 132 QIDALRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWN 191 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + L + G KAP A I +V+ GF+ + +G+ +V S +V+I Sbjct: 192 SVYPRLALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTAGVGRSTIKGIVVSSGLVLI 251 Query: 360 IDSLFAIF 367 + + Sbjct: 252 ANFYVSKI 259 >gi|56476144|ref|YP_157733.1| organic solvent resistance ABC transporter permease [Aromatoleum aromaticum EbN1] gi|56312187|emb|CAI06832.1| predicted ABC-type transport system involved in resistance to organic solvents, permease component [Aromatoleum aromaticum EbN1] Length = 264 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 129/267 (48%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 N L +G + + A GL++ +G+ + IR++Y+ Sbjct: 1 MNGLLALVRRLGGAVTDAVWRLGFAARFFGLLLLYSGQSLLRVH-------LTIREVYFS 53 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V+ QG L +FG+ L+++ RE+G ++ A++ A R Sbjct: 54 GVLSLLIIVVSGLFVGMVLGLQGYETLQRFGSGDALGVLVALSLTRELGPVVAALLFASR 113 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSA+ AEIG MK E++ A+ M ++ + +++PR W +IS+PLL L + + G Sbjct: 114 AGSAVTAEIGLMKATEQLKAMDMMAVNPIARVVAPRFWGGVISMPLLAALFSAMGVFGGW 173 Query: 284 IVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++ + F+S+ + ++ G+IK+ A+ ++A+ EG+ + + Sbjct: 174 LIGVVLIGVDEGAFWSQMQAAVDFRFDVVNGVIKSVVFGAAVSLIAVFEGYDCTPTAEGV 233 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +T VV S ++ +D + F F Sbjct: 234 SRAITRTVVSSALAILALDFVLTSFMF 260 >gi|294339439|emb|CAZ87798.1| Toluene tolerance protein Ttg2B [Thiomonas sp. 3As] Length = 261 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++V + LG + LI+QMY++G + ++ + Sbjct: 6 RLVSIGAGTRQLLSSLGYAARLFARLILLVGRVFMRPSLLIQQMYFLGNLSLVIIAVSGL 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG + LS++G+ L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 66 FVGFVLGLQGYYTLSRYGSSSALGVLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E+I A+ M +D V +++PR WA +I +PLL + + I+G +V + Sbjct: 126 AGEQIAAMEMMAVDPVVRVLAPRFWAGVIVMPLLAAVFSAVGIMGGYVVGVVMIGVDAGQ 185 Query: 297 FFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ S ++ G+IK+ A+ VA+ +G+ + + T VV + Sbjct: 186 FWSQMQSGVDVFKDVGNGVIKSVVFGLAVTFVALLQGWRSQPTPEGVSRATTRTVVIASL 245 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F+ Sbjct: 246 AVLALDFVLTAMMFS 260 >gi|160890565|ref|ZP_02071568.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492] gi|270295705|ref|ZP_06201905.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317479890|ref|ZP_07939007.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36] gi|156859564|gb|EDO52995.1| hypothetical protein BACUNI_03008 [Bacteroides uniformis ATCC 8492] gi|270273109|gb|EFA18971.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316903964|gb|EFV25801.1| hypothetical protein HMPREF1007_02124 [Bacteroides sp. 4_1_36] Length = 247 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G A + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MFKALKTVGRYIILMGRVFARPERMRMFFRQYVNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPFMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ ++PL+ + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVTTIPLMVTFSIFAGIIGAFCTCWFGGIMSAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFIWCGIIKSLFFAFIIASVSAFFGYTVEGGSIEVGKASTDSVVCSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTQLLMG 247 >gi|258541792|ref|YP_003187225.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256632870|dbj|BAH98845.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256635927|dbj|BAI01896.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256638982|dbj|BAI04944.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642036|dbj|BAI07991.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645091|dbj|BAI11039.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648146|dbj|BAI14087.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651199|dbj|BAI17133.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654190|dbj|BAI20117.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 261 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 118/253 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + S G + + + + + G +PVV L + Sbjct: 8 VARLGRATLSLIRAAGALALFAASGLSHIVRPPFYGRVFLSTFLETGFFSLPVVALTALF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G VIA Q +Q+ A+ ++ + RE+G +L +M+AGR G+A+ A+IG+M++ Sbjct: 68 SGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAQIGTMRV 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 ++IDA+ T+ + ++ L++PR+ A +I+LPLL ++A+ + G V + Sbjct: 128 TDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAVVKLGFSAPAY 187 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + ++ ++ GL+KA I ++ G+ + +G T VV + ++ Sbjct: 188 ITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAEGVGSATTAAVVAASIML 247 Query: 358 IIIDSLFAIFYFA 370 + D L +F+ Sbjct: 248 LAFDYLLTDLFFS 260 >gi|318042383|ref|ZP_07974339.1| putative transporter, membrane component [Synechococcus sp. CB0101] Length = 261 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 109/239 (45%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ A+ K + + L+ ++ G +VI+ G V Q A +L Sbjct: 22 LGESCLIGGQAMAALAKGQVGINDLMAELMEAGPGSFLIVIITGLAAGTVFNIQAASELV 81 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI +LTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 82 KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 141 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A++I P+ + A+ + Y IP VF++ + +++ Sbjct: 142 VQYLVVPRVLAMLIMTPVQCLAFFAVAMWSGQVSSTLLYQIPPGVFWNSVRTWMEPSDLP 201 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I +++ G +G T VV + V ++D + F Sbjct: 202 AMLLKAVVFGLQIAVISCGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 260 >gi|152972118|ref|YP_001337264.1| ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206579237|ref|YP_002236394.1| hypothetical protein KPK_0517 [Klebsiella pneumoniae 342] gi|238896701|ref|YP_002921446.1| putative ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|288933378|ref|YP_003437437.1| hypothetical protein Kvar_0495 [Klebsiella variicola At-22] gi|290511571|ref|ZP_06550940.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55] gi|329997630|ref|ZP_08302887.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3] gi|150956967|gb|ABR78997.1| putative transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206568295|gb|ACI10071.1| putative membrane protein [Klebsiella pneumoniae 342] gi|238549028|dbj|BAH65379.1| putative ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888107|gb|ADC56425.1| protein of unknown function DUF140 [Klebsiella variicola At-22] gi|289776564|gb|EFD84563.1| ABC transporter, permease component YrbE [Klebsiella sp. 1_1_55] gi|328538940|gb|EGF64994.1| toluene tolerance protein Ttg2B [Klebsiella sp. MS 92-3] Length = 260 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G ++V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|111018970|ref|YP_701942.1| ABC transporter permease [Rhodococcus jostii RHA1] gi|226361065|ref|YP_002778843.1| YrbE family protein [Rhodococcus opacus B4] gi|110818500|gb|ABG93784.1| possible ABC transport system, permease component [Rhodococcus jostii RHA1] gi|226239550|dbj|BAH49898.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 264 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 116/258 (44%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G + G ++ + +++K I Q +++ + + Sbjct: 1 MGVTRSSVLRPVNGALTQAGNIVELFVDVARNTFKRPFQFREFIEQAWFIASVTILPTAM 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ GAV++ Q + Q GAE F+ + +++ L+TA+++AG +GSA+ A++G Sbjct: 61 VAIPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPLVTALLVAGAAGSAVTADLG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 + I EEIDA+ +G++ ++ L+ PR+ A+++ LL L + I G Sbjct: 121 ARTIREEIDAMEVLGINPIQRLVVPRVLAMVLVAILLNGLVSVVGIAGGYFFNVILQGGN 180 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + + F + A L +I+ G +KA G++A +G +G V VV + Sbjct: 181 PGAYLASFSAFAQLPDIWVGELKAAVFGVIAGVIAAYKGLHPKGGPKGVGDAVNQSVVIT 240 Query: 354 ISIVIIIDSLFAIFYFAI 371 ++ + + + Y I Sbjct: 241 FLLLFFANLILTMVYLQI 258 >gi|329120837|ref|ZP_08249497.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] gi|327459709|gb|EGF06050.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] Length = 258 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 8/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + +G K + FI S +++++G L +RQ+Y+ GV V Sbjct: 2 DFIQTVGAKTLAFIRSIGSVCLFFAQILAHSGTSLLR-------LRLSVRQVYFAGVLSV 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG QL++F + +++ LRE+G +L A++ A +G A+ Sbjct: 55 LIIAVSGLFVGMVLGLQGYTQLAKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAM 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 +EIG MK E+++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + Sbjct: 115 TSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIYGAYLVGVE 174 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + +F+S+ + ++ GLIK+ A+ ++A+ +GF S + + T Sbjct: 175 WLGLDGGIFWSQMQNNIAFGYDVLNGLIKSACFGVAVTLIAVHQGFHCVPTSEGILRAST 234 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 VV S V+ +D + F F Sbjct: 235 RTVVSSALTVLAVDFILTAFMF 256 >gi|325300148|ref|YP_004260065.1| hypothetical protein Bacsa_3064 [Bacteroides salanitronis DSM 18170] gi|324319701|gb|ADY37592.1| protein of unknown function DUF140 [Bacteroides salanitronis DSM 18170] Length = 246 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 1/239 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG I G + + + + + +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYIMLMGRVFSRPERVRMYFKQYVNEMAQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ Sbjct: 68 SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGVN 127 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I LI +P+L + F+ +IGA W + + Sbjct: 128 SASYLILPKILGLITMIPVLVTFSIFAGVIGAFCTAWFAGIMNATDLEYGIQYCFVEWYV 187 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 188 WCSFIKSFFFAFIISSVSAFFGYTVEGGSIAVGKASTDAVVSSSVLILFSDLILTKLLS 246 >gi|59802415|ref|YP_209127.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA 1090] gi|194100076|ref|YP_002003216.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae NCCP11945] gi|239998068|ref|ZP_04717992.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae 35/02] gi|240079831|ref|ZP_04724374.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae FA19] gi|240112039|ref|ZP_04726529.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|240116987|ref|ZP_04731049.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|240122625|ref|ZP_04735581.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|240127329|ref|ZP_04739990.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] gi|268593920|ref|ZP_06128087.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae 35/02] gi|268595976|ref|ZP_06130143.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19] gi|268598097|ref|ZP_06132264.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|268602671|ref|ZP_06136838.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|268681221|ref|ZP_06148083.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|268685698|ref|ZP_06152560.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] gi|59719310|gb|AAW90715.1| putative abc transport protein, inner membrane protein [Neisseria gonorrhoeae FA 1090] gi|193935366|gb|ACF31190.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae NCCP11945] gi|268547309|gb|EEZ42727.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae 35/02] gi|268549764|gb|EEZ44783.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae FA19] gi|268582228|gb|EEZ46904.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae MS11] gi|268586802|gb|EEZ51478.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID1] gi|268621505|gb|EEZ53905.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID332] gi|268625982|gb|EEZ58382.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-93-1035] Length = 258 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGLIQSFGSITLFLLNILAKSGTAFARPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|113954700|ref|YP_731394.1| transporter membrane component [Synechococcus sp. CC9311] gi|113882051|gb|ABI47009.1| possible transporter, membrane component [Synechococcus sp. CC9311] Length = 248 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 114/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ +++ K + + L Q+ G +VI+ + G V Q +L+ Sbjct: 10 LGSSLLIGGQAVSATTKGRINTIDLFDQLQEAGPGSFLIVIITALAAGTVFNIQITAELN 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 SMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L AI A I Y IP AVF++ + T ++ Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQISSTNLYSIPPAVFWTAVRTWLTPDDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA IG++A G + +G T VV + V ++D L F Sbjct: 190 FMLIKALVFGLQIGVIACGWGMTTKGGAKEVGTSTTGAVVMILVSVALMDVLLTQILFG 248 >gi|325579009|ref|ZP_08148965.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325159244|gb|EGC71378.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 261 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 126/256 (49%), Gaps = 1/256 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I LG + + L++Q++ +GV + +++L Sbjct: 6 ISSLGRSVIKFFRALGRSGFMLFGALVGKPQVRKHFPLLVKQLHVLGVQSLLIILLSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG L F AE L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK Sbjct: 66 IGMVLGLQGYVVLVDFSAETSLGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ M +D +R +I+PR WA +I++P+L +L I G ++V + + F Sbjct: 126 TEQLSSLEMMAVDPLRRVIAPRFWAGLIAMPILALLFTAIGIWGGALVGVDWKGVDAGSF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + + + +I G IK+ F A A+ +A+ G+ S + + T VV + + Sbjct: 186 WSVMQNAVSWSYDILNGFIKSVFFAIAVVWIALFNGYDCIPTSEGISQATTRTVVHASLV 245 Query: 357 VIIIDSLFAIFYFAIG 372 V+ +D + F G Sbjct: 246 VLGLDFILTAIMFGAG 261 >gi|62185216|ref|YP_220001.1| putative permease component of ABC transporter [Chlamydophila abortus S26/3] gi|62148283|emb|CAH64049.1| putative permease component of ABC transporter [Chlamydophila abortus S26/3] Length = 261 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 117/253 (46%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + C LG + T S K S+ Q Y +GV+ +PVVIL VTG Sbjct: 8 RIFQILCVFPLELGRWMGFTCAVIKSLSWKKSLFRSVNIQGYDIGVASLPVVILTGAVTG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL G + L EIG +LTA+ ++GR G AI A +G+M++ E Sbjct: 68 IVLALQSCYQLGIHGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAISAFLGTMRMTE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ T+G++ + PRI A I++P L I A +S I G ++ + +P V+ Sbjct: 128 QVSAMETLGVNPLAYFALPRIIAGTIAMPALVIAAVWSGIFGGYLLCRYAFQLPAQVYLH 187 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +++I ++K+ I +A +G + K T VV S ++ Sbjct: 188 MVSGNVFISDIVMVIVKSLVFGFIITSLACYQGLGKHCRITDVAKVTTAGVVTSYISILF 247 Query: 360 IDSLFAIFYFAIG 372 + + F+ +G Sbjct: 248 ANCVITAFFHVLG 260 >gi|167564342|ref|ZP_02357258.1| toluene tolerance ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167571490|ref|ZP_02364364.1| toluene tolerance ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 255 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 129/262 (49%), Gaps = 8/262 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + IG+ ++ + + + V+ + +Q++++G Sbjct: 1 MISAIGRFVLGGLERTGYATRMFVRVVLEFFSLLRRP-------RLVTKQVHFLGNYSFV 53 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++ + G V+ QG + L+++G+E L+++ +RE+G +++A++ AGR+G+++ Sbjct: 54 IIAVSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLT 113 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++ A+ M +D ++ +I+PR+WA +I++PLL + + ++G +V Sbjct: 114 AEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLL 173 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + F+S+ + ++ G++K+ A+ +A+ +G+ + T Sbjct: 174 IGVDPGAFWSQMQGGVEVWADVGNGVLKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTK 233 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV + V+ +D L F+ Sbjct: 234 TVVYASLAVLGLDFLLTALMFS 255 >gi|166365969|ref|YP_001658242.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843] gi|166088342|dbj|BAG03050.1| hypothetical protein MAE_32280 [Microcystis aeruginosa NIES-843] Length = 268 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 108/250 (43%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F + S L + TG + + QM G + + + ++ + V G Sbjct: 8 FSKELSSWFRRCWLAVLLTGRVFYFLFTRQPDWRVTQEQMVAAGPASLIIAMITAAVIGM 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 + Q A + GA ++++ RE+ ++ A+++AGR GSA AEIG+MK+ E+ Sbjct: 68 IFTIQVAREFQALGAGSMVGGILALALGRELCPIMMAIVVAGRVGSAFAAEIGTMKVTEQ 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ + D V L+ PR+ A + +P L+++A + +V Y I +VF Sbjct: 128 IDALYMLKTDPVEYLVLPRLIACCLMVPALSVMALLIGLGSGLLVGQSLYGIANSVFLDS 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + ++ +G +K I I+ G + +G+ T VV + + + Sbjct: 188 VRGFLGVGDVLSGPVKGVVFGALIAIIGCNWGLTTDGGAKGVGQATTAAVVTMLLAIFVS 247 Query: 361 DSLFAIFYFA 370 + L F Sbjct: 248 NLLMTWILFQ 257 >gi|159903919|ref|YP_001551263.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9211] gi|159889095|gb|ABX09309.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9211] Length = 248 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ SS K LI Q+ G + +V++ G V Q A +LS Sbjct: 10 LGSSMLIGGQAITSSTKGNINKSDLIDQLMEAGPASFIIVLITGISAGTVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G L++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGVGSEVGGLLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLQTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A++I PL +L A+ I +Y IP VF++ + +++I Sbjct: 130 IDYLVVPRVIAMVIMAPLQCLLFFTVALWSGQISSTYFYSIPINVFWNSVNEWLVISDIP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I ++A G + +G T VV ++ V ++D L F Sbjct: 190 FMLIKAVVFGFQIAVIACGWGLTTRGGAKEVGTSTTGAVVMTLLSVSLMDVLLTKVLFG 248 >gi|34495903|ref|NP_900118.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34101758|gb|AAQ58126.1| probable ABC transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 257 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 131/264 (49%), Gaps = 8/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G V + + L ++ N+G+ L IR++Y+ GV Sbjct: 1 MTSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLR-------LQMTIREIYFAGVM 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG L++FG+ ++++ LRE+G +L A++ A R+GS Sbjct: 54 SLIIIVVSGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLAALLFASRAGS 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG MK E++DA+ M ++ + +I+PR WA ++S+P+L L N I G +V Sbjct: 114 AMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNVVGIFGGYLVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F+S+ L ++ G+IK+ A+ ++A+ EG+ + + Sbjct: 174 VVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 T VV S +++ +D + F F Sbjct: 234 TTRTVVTSALVILALDFVLTAFMF 257 >gi|87123683|ref|ZP_01079533.1| possible transporter, membrane component [Synechococcus sp. RS9917] gi|86168252|gb|EAQ69509.1| possible transporter, membrane component [Synechococcus sp. RS9917] Length = 248 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 113/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ A++ + + + L Q+ G +VI+ G+V Q A +LS Sbjct: 10 LGSSLLIGGQAVAATARGRINTIDLFDQLLEAGPGSFLIVIITGIAAGSVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 RQGAGSTVGGILALGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L AI I + Y IP +VF++ + ++ Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSGQITSTELYSIPPSVFWTSVRTWMQPDDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I +++ G +G T VV + V ++D L F Sbjct: 190 FMLIKALVFGLQIAVLSCGWGLTTEGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248 >gi|167626717|ref|YP_001677217.1| ABC-type transport system permease [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667292|ref|ZP_04754870.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875843|ref|ZP_05248553.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596718|gb|ABZ86716.1| ABC-type transport system permease protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841864|gb|EET20278.1| ABC transporter, permease protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 254 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 126/252 (50%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + N+ L + + K + I Q+ VGV+ + +++ Sbjct: 1 MSVFNNIYKLTISLIYSFLKSIDLVLRIVFSKLSIRDCITQIKAVGVNSIIIIVTSGIFI 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V++ QG + LS+FGA ++++ LRE+G ++TA++ AGR+ S+I +EIG MK Sbjct: 61 GLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKAT 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 ++I++++ M ++ + ++S R WA +IS P+L ++ AI+ ++ I + F+ Sbjct: 121 DQINSLKVMNVNPISFILSTRFWACVISGPILALIFATVAILAGFVLAEAGLGISYGEFW 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 S S+ T+++I G+IK+ A +A+ +G+ SN + K T VV V+ Sbjct: 181 SNIQSSVTISDITNGIIKSLVFAFITAWIALYQGYYCIADSNGIAKATTKTVVYCCMSVL 240 Query: 359 IIDSLFAIFYFA 370 D + F Sbjct: 241 GADLILTSIMFG 252 >gi|89891419|ref|ZP_01202925.1| putative ABC transporter [Flavobacteria bacterium BBFL7] gi|89516450|gb|EAS19111.1| putative ABC transporter [Flavobacteria bacterium BBFL7] Length = 246 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 2/245 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G I K +++++ + + + + IS GAV+A Q Sbjct: 1 MRFLRHIGKYILMLIGIFKRPTKTSVLRELILKEIDDLVIGSIGITAFISLFMGAVVALQ 60 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L + + E +V++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNLDNPLIPKSLIGFATRQSIILEFAPTFISVIMAGKVGSYITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + LI P+I AL+ P L + F I G + + F + Sbjct: 121 EVMGINPLNYLIYPKIIALLF-YPFLIAIIMFVGIFGGFLASVYGNLVSLEDFIVGLQDS 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK + + G+ + + +GK TT V + +I+ + + Sbjct: 180 FIPWHVAYAFIKTMVFGILLATIPSYHGYYMEGGALEVGKASTTSFVWTCVAIIVANYIL 239 Query: 365 AIFYF 369 Sbjct: 240 TQILL 244 >gi|240013249|ref|ZP_04720162.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae DGI18] gi|240015696|ref|ZP_04722236.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae FA6140] gi|240114786|ref|ZP_04728848.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|240120321|ref|ZP_04733283.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae PID24-1] gi|240124812|ref|ZP_04737698.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|254492848|ref|ZP_05106019.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291] gi|260441401|ref|ZP_05795217.1| Putative ABC transport inner membrane subunit [Neisseria gonorrhoeae DGI2] gi|268600440|ref|ZP_06134607.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|268683391|ref|ZP_06150253.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|291044759|ref|ZP_06570468.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2] gi|293397855|ref|ZP_06642061.1| ABC transport system permease [Neisseria gonorrhoeae F62] gi|226511888|gb|EEH61233.1| ABC transporter inner membrane subunit [Neisseria gonorrhoeae 1291] gi|268584571|gb|EEZ49247.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae PID18] gi|268623675|gb|EEZ56075.1| ABC transport inner membrane subunit [Neisseria gonorrhoeae SK-92-679] gi|291011653|gb|EFE03649.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae DGI2] gi|291611801|gb|EFF40870.1| ABC transport system permease [Neisseria gonorrhoeae F62] gi|317165512|gb|ADV09053.1| ABC transporter inner membrane protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 258 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + G + A S +RQ+Y+ GV V +V + Sbjct: 4 IRSVGAKTLGLIQPFGSITLFLLNILAKSGTAFARPRLSVRQVYFAGVLSVLIVAVSGLF 63 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG QLS+F + +++ LRE+G +L A++ A +G A+ +EIG MK Sbjct: 64 VGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLAAILFASSAGGAMTSEIGLMKT 123 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +++A+ M ++ V +++PR WA + S+PLL + N + I GA +V + + +F Sbjct: 124 TGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIFNVAGIFGAYLVGVSWLGLDSGIF 183 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + + + T+ ++ GLIK+ A+ ++A+ +GF S + + T VV S Sbjct: 184 WPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQGFHCIPTSEGILRASTRTVVSSALT 243 Query: 357 VIIIDSLFAIFYF 369 ++ +D + + F Sbjct: 244 ILAVDFILTAWMF 256 >gi|167753066|ref|ZP_02425193.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216] gi|167659380|gb|EDS03510.1| hypothetical protein ALIPUT_01336 [Alistipes putredinis DSM 17216] Length = 247 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++G G+ + K + +I +M +G++ + + +IS GAVI Sbjct: 1 MLKIFELIGRYFILMGKVFSRPEKRAIYRRRIIYEMESLGLNSIGLTAIISVFIGAVITL 60 Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + L F + + E + A+++AG+ GS+I +EIG+M+I E+IDA Sbjct: 61 QMSINLESPFIPKYIIGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A ++ P L IL+ I G ++ + + Sbjct: 121 LEIMGVNSASYLILPKIVATVLFFPFLAILSILIGIAGGYLISALTGIMIPDDYVQGLLY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I LIK A I ++ G+ +S +G T VV S +++I + + Sbjct: 181 DFRPYSITYTLIKMAVFAFIITSISAFYGYYAKGNSLEVGAASTKAVVASSIVIMIFNLI 240 Query: 364 FAIFYF 369 Sbjct: 241 LTQILL 246 >gi|116073591|ref|ZP_01470853.1| possible transporter, membrane component [Synechococcus sp. RS9916] gi|116068896|gb|EAU74648.1| possible transporter, membrane component [Synechococcus sp. RS9916] Length = 248 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 114/239 (47%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ +++ + K + L Q+ G +V++ G+V Q A +LS Sbjct: 10 LGSSLLIGGQAVSATARGKINTIDLFDQLMEAGPGSFLIVLITGVAAGSVFNIQVAAELS 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA +++I REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 70 GMGAGSTVGGVLAIGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L AI I ++Y+IP AVF++ + ++ Sbjct: 130 VEYLVVPRLIAMVVMAPVQCLLFFAVAIYSGQITSTEFYNIPPAVFWNSVRTWLQPDDLP 189 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I ++A G +G T VV + V ++D L F Sbjct: 190 FMLIKALVFGLQIAVLACGWGLTTSGGPKEVGTSTTGSVVMILVTVALMDVLLTQILFG 248 >gi|88607911|ref|YP_504642.1| putative ABC transporter, permease protein [Anaplasma phagocytophilum HZ] gi|88598974|gb|ABD44444.1| putative ABC transporter, permease protein [Anaplasma phagocytophilum HZ] Length = 244 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 116/244 (47%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +G V + S +L +Q + V +P+V + S TG +A Q Sbjct: 1 MGLLIPVGRVAIFCVKAVFHSLVPPYYLWITTKQFFEVWFFSLPIVAVTSLFTGGALALQ 60 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 S + F ++++ +RE+G +L +++AGR G+A+ AEIG+M+I E+IDA+ Sbjct: 61 DTLVGSAKVSGNFMAGIVTVAIVRELGPVLLGLIVAGRIGAAVAAEIGTMRITEQIDALT 120 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 T+ D LI+PR+ AL++++P+L I A+ + G +V + Sbjct: 121 TLDTDPFHYLIAPRVIALVLAMPVLMIYADILGVFGGFVVGTLGLGYGQEEYLGGVMEFL 180 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L ++ GL+KA I +V G+ + + +G T V + ++I+++ + Sbjct: 181 LLQDVIEGLVKAVSFGLVISLVGCYNGYHCEIGARGVGTATTKTSVAASMLIILLNYIIT 240 Query: 366 IFYF 369 +FY Sbjct: 241 VFYA 244 >gi|218441471|ref|YP_002379800.1| hypothetical protein PCC7424_4570 [Cyanothece sp. PCC 7424] gi|218174199|gb|ACK72932.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7424] Length = 266 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 110/246 (44%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S + +G K + QM VG + + ++ + V G + Sbjct: 9 GFGSWIQRTWAAVLLSGRAIFFVSIGKIDRQLTLEQMMAVGPGSLVIALITAAVIGMIFT 68 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A + GA ++++ RE+ ++TAV++AGR GSA AEIG+M++ E+IDA Sbjct: 69 IQVAREFLALGAGSAVGGILALSLARELSPIMTAVIVAGRVGSAFAAEIGTMQVTEQIDA 128 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + + D + L+ PR+ A + +PL+TI+A + G ++ YDI VF + Sbjct: 129 LYMLKTDPIEYLVVPRLVACCVMVPLMTIIALVIGLAGGLLIASSIYDISIEVFLDSIQT 188 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +++I +G IK I I+ G + +G+ T VV + + + + Sbjct: 189 FLKISDILSGPIKGIVFGALIAIIGCNWGLTTTGGAKGVGESTTAAVVTCLLAIFVSNFF 248 Query: 364 FAIFYF 369 + F Sbjct: 249 LSWIMF 254 >gi|269128029|ref|YP_003301399.1| hypothetical protein Tcur_3830 [Thermomonospora curvata DSM 43183] gi|268312987|gb|ACY99361.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 267 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 105/252 (41%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + GL+ E ++ + + I Q +++ V+LI+ G Sbjct: 11 RVLRRAGKALDETGLLFVIFLEGLRRTWDVRTWWGEFIEQCWFIARVTSMPVLLIAIPLG 70 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 A I+ Q Q GA+ + L+ + ++ L +A++I+G GSAI +++G+ I + Sbjct: 71 ATISLQAGDIARQLGAQSGTGALVVANMITQVAPLASALLISGAGGSAITSDMGARNIRD 130 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+ A+ MG++ V L++PR+WA LL + S G + +F Sbjct: 131 ELAAMEVMGINPVHRLVTPRLWAASTVAVLLCSVVILSGTAGGFYFNVIQQGVSPGAYFD 190 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 S +++ L KA VA G + +G+ V VV + +V Sbjct: 191 GATSLLQFSDLVVTLFKAWIFGFIAAAVACYAGMNCDLGPVGVGRAVNKAVVVTSILVFS 250 Query: 360 IDSLFAIFYFAI 371 + + + Y + Sbjct: 251 ANYVITMLYQVL 262 >gi|88807464|ref|ZP_01122976.1| possible transporter, membrane component [Synechococcus sp. WH 7805] gi|88788678|gb|EAR19833.1| possible transporter, membrane component [Synechococcus sp. WH 7805] Length = 257 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 111/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ + + + L+ Q+ G +VI+ S G V Q +LS Sbjct: 19 LGSSLIIGGQAVTATVRGRINTVDLLDQLQEAGPGSFLIVIITSLAAGTVFNIQVTKELS 78 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 GA ++++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 79 SMGASATVGGVLAVGLAREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 138 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L AI A + Y IP VF+S S +I Sbjct: 139 VEYLVVPRLIAMVVMAPVQCLLFFGVAIWSAQWSSTELYMIPPQVFWSSVRSWLMPDDIP 198 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIKA I +++ G +G T VV + V ++D++ F Sbjct: 199 FMLIKALVFGLQIAVLSCGWGMTTAGGPKEVGTSTTGAVVMILVTVALMDTVLTQLLFG 257 >gi|194337270|ref|YP_002019064.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme BU-1] gi|194309747|gb|ACF44447.1| protein of unknown function DUF140 [Pelodictyon phaeoclathratiforme BU-1] Length = 264 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 116/243 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + K K + + Q G +P+V++ + GA++A Sbjct: 17 LKDFFLTMQDFFLFSLRAFMAMPKIKRYWRDFLDQAGICGTDSIPIVLVSAISIGALLAI 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ ++ +RE+G LL +M++ R GS AE+G+M+I+E+IDA+ Sbjct: 77 EVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D + L+ PR+ A +I LT L++F+ + A+ + Y+ I +F++ + Sbjct: 137 RAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYPR 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G +KAP A I +V+ GF+ + +G+ +V S +V+I + Sbjct: 197 LAPKDFVVGFLKAPVFAIIITLVSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIANFYV 256 Query: 365 AIF 367 + Sbjct: 257 SKI 259 >gi|254431004|ref|ZP_05044707.1| ABC-type transport system involved in resistance to organic solvents permease component [Cyanobium sp. PCC 7001] gi|197625457|gb|EDY38016.1| ABC-type transport system involved in resistance to organic solvents permease component [Cyanobium sp. PCC 7001] Length = 258 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 111/231 (48%) Query: 140 GEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFS 199 G+ ++ + + L L++++ G +V++ + G V Q +LS+ GA Sbjct: 28 GQAISAIARGRIGLNDLMQELLEAGPGSFLIVVITALAAGTVFNIQVVAELSKQGANAAV 87 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPR 259 L+++ REI LLTA ++ G+ +A A++G+MK+ E+IDAI + D V+ L+ PR Sbjct: 88 GGLLALGLSREIAPLLTATLLTGKVATAYAAQLGTMKVTEQIDAITMLRTDPVQYLVVPR 147 Query: 260 IWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPF 319 + A+++ P+ +L I + Y+IP +VF++ + ++ L+KA Sbjct: 148 VLAMVVMAPVQCLLFFGVGIWSGQLSSSLLYNIPPSVFWTSVRTWMQPEDLPFMLVKALV 207 Query: 320 MACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 I ++A G +G T VV + V ++D+L F Sbjct: 208 FGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVALMDALLTKVLFG 258 >gi|33861880|ref|NP_893441.1| putative transporter, membrane component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640248|emb|CAE19783.1| possible transporter, membrane component [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 251 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 3/242 (1%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 L + G+ ++ K L Q+ G + +V++ G V Q A QL+ Sbjct: 10 LVSSLIIGGQAINYIFRGKISKNDLFEQLMESGPGSLVIVLITGIAAGTVFNIQVASQLT 69 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI + + Sbjct: 70 SMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEP 129 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLA 308 ++ L+ PR+ ++II P+ +L A+ I +Y++P VF++ S + T + Sbjct: 130 IQYLVVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPIVFWTSVRSGNVSLTSS 189 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ + +IK+ I I+A G +G T VV ++ V ++D + Sbjct: 190 DLSSMIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQIL 249 Query: 369 FA 370 F Sbjct: 250 FG 251 >gi|269958397|ref|YP_003328184.1| putative ABC transporter [Anaplasma centrale str. Israel] gi|269848226|gb|ACZ48870.1| putative ABC transporter [Anaplasma centrale str. Israel] Length = 259 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 110/250 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +G + + + RQ + + +P+V + + TG Sbjct: 10 AIGRYFIGLIIPVGRMSVFCAQSVMRGILPPYYFPIAARQFFEMWFFSLPIVGMTALFTG 69 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 + Q A F ++++ +RE+G +L +++AGR G+A+ AEIG+M+I E Sbjct: 70 GALVLQDTLVGGGKVAAHFMAGIVTVATVRELGPVLIGLIVAGRVGAAVAAEIGTMRITE 129 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDA+ T+ + + L+ PR+ AL+I++P+L + +F I G V + Sbjct: 130 QIDALDTLEANPFQYLVMPRVIALMIAMPVLIVYTDFLGIFGGYAVGTLGLGYDSNEYLG 189 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++ GL+KA I +V G+ + +G T VV S ++++ Sbjct: 190 GVAEFLHFKDVAEGLVKAVSFGFVISLVGCYSGYYCSGGARGVGVATTNTVVASSMLIVL 249 Query: 360 IDSLFAIFYF 369 ++ + +FY Sbjct: 250 LNYVITVFYA 259 >gi|294816012|ref|ZP_06774655.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|326444354|ref|ZP_08219088.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|294328611|gb|EFG10254.1| Putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] Length = 293 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + H G + T E S ++ L I Q ++V + L+S GAVIA Sbjct: 41 ALAPLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIAL 100 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 101 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 160 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL + + +G D + + F + Sbjct: 161 EVMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 220 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA G+VA G +G V VV + ++ ++ + Sbjct: 221 AQLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMII 280 Query: 365 AIFYFAI 371 Y + Sbjct: 281 TAIYLQV 287 >gi|148241576|ref|YP_001226733.1| ABC-type transport system, permease component [Synechococcus sp. RCC307] gi|147849886|emb|CAK27380.1| ABC-type transport system, permease component [Synechococcus sp. RCC307] Length = 250 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 110/239 (46%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG G+ A++ + + + L + G S VV++I G V Q A +L+ Sbjct: 12 LGSSCLIGGQALAAAARGRVPIGELSENLMEAGPSSFLVVLIIGMAAGTVFNIQVAAELT 71 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI LLTA+++ G+ +A A +G+MK+ E+IDAI + D Sbjct: 72 KQGAGSTVGGILALGLAREIAPLLTAMLLTGKVATAYAASLGTMKVTEQIDAITMLRTDP 131 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A+++ P+ +L + + Y IP VF+S + +++ Sbjct: 132 VEYLVVPRVIAMLVMSPVQCLLFFGIGMWSGMLSSSMLYRIPPPVFWSSMRTWMQPSDVP 191 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + L+KA I I+A G +G T VV + + I D + + Sbjct: 192 SMLLKATVFGLEIAIIACGWGLTTRGGPKEVGTSTTGAVVMILLTIAITDVILTQVLYG 250 >gi|325281943|ref|YP_004254485.1| hypothetical protein Odosp_3346 [Odoribacter splanchnicus DSM 20712] gi|324313752|gb|ADY34305.1| protein of unknown function DUF140 [Odoribacter splanchnicus DSM 20712] Length = 245 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 1/241 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + LG + + + K + +I + +G++ + +V++ISF GAV+ Q A Sbjct: 3 FLYKLGSYLIFIRKAFSRPEKRSVYTKEVIVEFEKLGLNSIVLVVIISFFIGAVLTLQTA 62 Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + + + L L E + ++++AG+ GS I +EIGSM+I E+I+A+ T Sbjct: 63 YNMQSPLLPRYLIGYLTRETMLLEFSSTIVSLILAGKIGSNIASEIGSMRITEQIEALET 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ V L+ P+I A ++ P+L I + F I+G I + F F H + Sbjct: 123 MGVNSVSYLVGPKILASLVINPILYIFSVFIGILGGIISGLISGVVNFEDFVYGLHFSFN 182 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++K F A + G+ V + +GK T VV S ++ + + Sbjct: 183 PYYVTYSIVKTLFFAFIFTSIPAFYGYYVQGGAREVGKAGTKAVVDSSIAILTANLVLTQ 242 Query: 367 F 367 Sbjct: 243 I 243 >gi|300775379|ref|ZP_07085241.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] gi|300506119|gb|EFK37255.1| ABC superfamily ATP binding cassette transporter permease protein [Chryseobacterium gleum ATCC 35910] Length = 250 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 3/246 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G+ K + F +R++ +GV+ +V+ S GAV+A Sbjct: 2 LKKFFTAVGEYIILLGKSLQKPQKMRVFWKLFMREINDLGVNSFGLVVFTSIFVGAVVAI 61 Query: 185 QGAFQL---SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q S F + + E + ++++AG+ GS I + IG+M+++E+I Sbjct: 62 QMFNNFDASSFPIPTSFVGYATKAVLVLEFSPTIISLILAGKVGSYIASSIGTMRVSEQI 121 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ LI P+I A ++ PLL ++ I G I + + Sbjct: 122 DALDIMGVNSPNFLIFPKIVACVLFNPLLIAISIVFGIGGGYIAGILTGNWTENDYIVGI 181 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 I+ IK A I V G+ V S +G+ T VV ++ +II + Sbjct: 182 QMYMPNLFIYYAFIKTTVFAFIIATVPSYFGYNVKGGSLEVGRASTQAVVWTMVFIIISE 241 Query: 362 SLFAIF 367 + Sbjct: 242 LILTQL 247 >gi|95928284|ref|ZP_01311032.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM 684] gi|95135555|gb|EAT17206.1| protein of unknown function DUF140 [Desulfuromonas acetoxidans DSM 684] Length = 261 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 131/260 (50%), Gaps = 6/260 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + G S K + ++RQ++++G + + V++ Sbjct: 2 RFVALLGHHTLHFLETAGRFGMFLLVSVYSMIKPPYKVKPIVRQIHFIGANSLFVILFTG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ QG + L++FG+ F +++ +RE+G +L A+M+ GR+GSAI AE+G M Sbjct: 62 LFTGMVLGLQGYYTLAKFGSVGFLGGAVALSLIRELGPVLAALMVIGRAGSAICAEVGIM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + +E+IDA+ M +D + LI P++ A +I++PLLT + + I G ++ + +D+ Sbjct: 122 RNSEQIDALECMAIDPISYLIVPKLVAGLIAMPLLTAIFDVIGIFGGFMIGVQLFDVSAG 181 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV------GVHSNSLGKKVTTC 349 +F +S+ +I GL+K+ + + +GF + G + + + T+ Sbjct: 182 SYFQGMYSSVVWLDIEMGLVKSLVFGLLLVWICAAKGFYLHLERGGGFGAEGVSRTTTSA 241 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VV + V++ D L + Sbjct: 242 VVLASVSVLVWDYLISAILL 261 >gi|220907786|ref|YP_002483097.1| hypothetical protein Cyan7425_2378 [Cyanothece sp. PCC 7425] gi|219864397|gb|ACL44736.1| protein of unknown function DUF140 [Cyanothece sp. PCC 7425] Length = 255 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 111/235 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + + +L+ Q+ VG + V+LI+ TG + Q +LSQFG Sbjct: 21 TLFIFGQVWMRILQRRIHRDNLLEQLAIVGWGSLLAVVLINTFTGVLFTIQTTRELSQFG 80 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A+ ++ RE+ +LTA ++ G SA AEIG M++ ++IDA+ + D + Sbjct: 81 AKSLVGGAFALGYCRELAPVLTAGLLVGEVSSAFAAEIGEMRVTDQIDALYILHTDPIDY 140 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ + + LP+LT+LA A++G ++ K Y IP VF + + + ++ + Sbjct: 141 LVVPRVLSCCLMLPVLTVLAIGGAMLGGTLAGAKIYGIPPTVFLNSIQAVLEVGDLCGIV 200 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 +KA G+V G + + K VV +V + + I+ Sbjct: 201 LKAFIFGIITGLVGCGWGLTTTGGAKGVSKSTKAAVVNGWILVFFANFVLTIWLT 255 >gi|124005927|ref|ZP_01690765.1| domain of unknown function superfamily [Microscilla marina ATCC 23134] gi|123988610|gb|EAY28251.1| domain of unknown function superfamily [Microscilla marina ATCC 23134] Length = 248 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 1/244 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + +FK ++ I + +G+ V +V++ S GAV A Q A+ Sbjct: 1 MQTLGKYCIFIASLFYNRERFKVYVRLTIDECMRIGIDSVFIVVITSTFIGAVAAVQTAY 60 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L ++ ++ + + E +T +++AG+ GS I +G+M+I E++DAI M Sbjct: 61 NLVSPAIPLYVIGTIVRDMAILEFAPTITCIVLAGKVGSNIAGGLGTMRITEQVDAIEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ L+ P+I A +I++P+L ++A F +I+G I + + + Sbjct: 121 GINAASYLVLPKITAALITIPMLCVIAGFLSIMGGFISGTVTGALTESQYIYGIRWDFNP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 I+ +IK+ A I ++ +GF + +G+ T V S V+ D + A Sbjct: 181 GGIYFAIIKSFVFAYLISSISAFKGFFTTGGALEVGQSSTNAVTSSTIAVLFADYILAQL 240 Query: 368 YFAI 371 I Sbjct: 241 LAGI 244 >gi|91070487|gb|ABE11396.1| putative transporter, membrane component [uncultured Prochlorococcus marinus clone HOT0M-1A11] Length = 251 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 10/254 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F S I G ++ ++ K L Q+ G + +V++ G Sbjct: 5 NFFKRLLSSLIIGGQAMNFI-------FRGKISKNDLFDQLMESGPGSLLIVLITGIAAG 57 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E Sbjct: 58 TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +I+AI + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ Sbjct: 118 QIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177 Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 S + T ++ + LIK+ I I+A G +G T VV ++ Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237 Query: 357 VIIIDSLFAIFYFA 370 V ++D L F Sbjct: 238 VSLMDVLLTQILFG 251 >gi|313158068|gb|EFR57473.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 247 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++G G+ + K + ++ +M +G+ + + +IS GAVI Sbjct: 1 MLKIFELIGRYFILMGKVFSRPEKAAIYRRRIVYEMESLGIDSIGLTAIISVFIGAVITL 60 Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q L F + E + A+++AG+ GS+I +EIG+M+I E+IDA Sbjct: 61 QMCINLDSPFIPRSLVGYATRETMILEFSSTVVALILAGKVGSSIASEIGTMRITEQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A ++ P LTIL+ IIG + + + A + Sbjct: 121 LEIMGVNSASYLILPKIVAAVVFFPFLTILSIAIGIIGGWAIAYLTGIMIPADYIDGLLM 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I LIK A I ++ G+ +S +G T VV S +++I + + Sbjct: 181 DFKPYSIVYSLIKTAVFAYIITSISAFYGYYAKGNSLEVGAASTRAVVASSVVIMIFNLI 240 Query: 364 FAIFYF 369 Sbjct: 241 LTQVLL 246 >gi|217969318|ref|YP_002354552.1| hypothetical protein Tmz1t_0889 [Thauera sp. MZ1T] gi|217506645|gb|ACK53656.1| protein of unknown function DUF140 [Thauera sp. MZ1T] Length = 262 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 129/267 (48%), Gaps = 8/267 (2%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 ++ + IG + I L V+ N+G+ + IR++Y+ Sbjct: 1 MSAIASALRRIGALTIDGIWRLGFATRFLFAVLLNSGQSLRRIH-------LTIRELYFS 53 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 GV + ++++ G V+ QG L ++G+ ++++ LRE+G ++ A++ A R Sbjct: 54 GVLSLLIIMVSGLFVGLVLGLQGYDILQRYGSADAVGVMVALSLLRELGPVIAALLFASR 113 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 +GSAI AEIG MK E++ A+ M ++ + +++PR W ++S+PLL L + + G Sbjct: 114 AGSAITAEIGLMKTTEQLKAMDMMAVNPIARVVAPRFWGGVLSMPLLAALFSAMGVFGGW 173 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++ + F+S+ + ++ G+IK+ + ++A+ EG+ + + Sbjct: 174 LITVVVIGVDDGAFWSQMQAAVEFRYDVVNGVIKSAVFGTVVSLIAVFEGYDCQPTAEGV 233 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +T VV S ++ +D + F F Sbjct: 234 SRAITRTVVTSALAILALDFVLTSFMF 260 >gi|78779806|ref|YP_397918.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9312] gi|78713305|gb|ABB50482.1| Protein of unknown function DUF140 [Prochlorococcus marinus str. MIT 9312] Length = 251 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 10/254 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 KF S I G I+ ++ K L Q+ G + +V++ G Sbjct: 5 KFFKRLLSSIMIGGQAINFI-------FRGKISKNDLFEQLMESGPGSLLIVLITGIAAG 57 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E Sbjct: 58 TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +IDAI + + ++ L+ PR+ +++I P+ +L A+ I +Y +P VF++ Sbjct: 118 QIDAITMLRTEPIQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177 Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 S + T ++ + LIK+ I I+A G +G T VV ++ Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLIISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237 Query: 357 VIIIDSLFAIFYFA 370 V ++D L F Sbjct: 238 VSLMDVLLTQILFG 251 >gi|297190651|ref|ZP_06908049.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719878|gb|EDY63786.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 281 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 112/273 (41%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 G V+ + + G + + E + ++ L I Sbjct: 3 APPPVRPPALADDRPAGVPAVRGPSKLLAPLRETGKLFALAAEVTRAIFRRPFQLREFIE 62 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q ++V + L+S GAVIA Q Q GA+ F+ + +++ L+ A+ Sbjct: 63 QFWFVASVTILPAALVSIPFGAVIALQVGSLTQQLGAQSFTGGASVLAVIQQASPLIVAL 122 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +IAG GSAI A++GS KI EE+DA+ MG+ V+ L+ PR+ A ++ LL + + Sbjct: 123 LIAGAGGSAICADLGSRKIREELDAMEVMGVSPVQRLVVPRVLATMLVAVLLNGMVSVVG 182 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 +G + + F + A L +++ +KA GIVA G Sbjct: 183 TLGGYFFNVIMQGGTPGAYLASFSALAQLPDLYVSELKALIFGFIAGIVAAYRGLGPRGG 242 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ ++ + Y I Sbjct: 243 PKGVGDAVNQSVVITFMLLFFVNMVLTAIYLQI 275 >gi|300690218|ref|YP_003751213.1| hypothetical protein RPSI07_0537 [Ralstonia solanacearum PSI07] gi|299077278|emb|CBJ49904.1| conserved membrane protein of unknown function, DUF140 [Ralstonia solanacearum PSI07] Length = 255 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 118/247 (47%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + +I Q+ ++G ++ + G V+ Sbjct: 9 VRVLISRLGYAARMLVALVGAWRDVLRRPRLVIEQLRFIGNDSFIIIAVSGLFVGFVLGL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK NEE+ A+ Sbjct: 69 QGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKANEELIAM 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + +++PR W I++PLL + + ++G V + F+S+ + Sbjct: 129 EMMAVDPLARVLAPRFWGGFIAMPLLAAIFSAVGVLGGYFVGVGLIGVDAGAFWSQMQAG 188 Query: 305 AT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ G+IK+ A+ VA+ +G+ + + T VV + V+ +D + Sbjct: 189 VDVVDDVLNGVIKSVVFGVAVTFVALYQGYEAKATPEGVARATTRTVVIASLAVLALDFV 248 Query: 364 FAIFYFA 370 F+ Sbjct: 249 LTALMFS 255 >gi|309785522|ref|ZP_07680153.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617] gi|308926642|gb|EFP72118.1| toluene tolerance protein Ttg2B [Shigella dysenteriae 1617] Length = 235 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 1/234 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 +F+ L+RQ+Y VGV + ++++ G V+ QG L+ + AE Sbjct: 1 MLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAET 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +IS Sbjct: 61 SLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVIS 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIK 316 PR WA +ISLPLLTI+ I G S+V + I F+S + ++ LIK Sbjct: 121 PRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIK 180 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + A + +++ G+ S + + T VV S V+ +D + F Sbjct: 181 SVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 234 >gi|227538358|ref|ZP_03968407.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300774198|ref|ZP_07084065.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] gi|227241873|gb|EEI91888.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300758877|gb|EFK55706.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] Length = 252 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 109/235 (46%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + F + +IRQ Y +G +P++ + F+ G V + Sbjct: 5 VRNLLIEFANIHRFLMRFLKEVVSPPFEIKEIIRQCYEIGWRSLPLISVTGFIVGFVFTK 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q L +FGA + L+SI +R + L+TA++ +G+ GS I AE+ SM + E+IDA+ Sbjct: 65 QSRPSLEEFGATSWLPSLISIAIIRALAPLVTALIASGKVGSQIGAELSSMNVTEQIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 G + + LI R+WA I +P+L ++G + I D+ F FF++ Sbjct: 125 EVSGTNPFKFLIVSRVWATTIGIPILCFYTAGIGLLGGYLSIASKDDVSFLSFFTQVFEA 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 +IF + +A IG V+ G+ + +GK + VV S+ IV I Sbjct: 185 IAYKDIFAMVFRAVVFGFTIGAVSSYCGYFSSKGTEGVGKAANSAVVASMFIVFI 239 >gi|21673166|ref|NP_661231.1| hypothetical protein CT0327 [Chlorobium tepidum TLS] gi|21646245|gb|AAM71573.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 252 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 119/247 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + A+ K K + ++ Q + GV +P+V++ S GA+++ Sbjct: 4 FKELVLTMQEFFYFALRAFATLPKAKRYWRDVLDQAFICGVESIPIVLVSSISIGALMSM 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L +FGA+ S LRE+G LL +M++ R G+ AE+G+M+I+E+IDA+ Sbjct: 64 EVGNLLEEFGAKTMLGRSTSNAVLRELGPLLMGLMLSARYGARNGAELGAMQISEQIDAL 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D + L+ PR+ A +I L L++F+ + ++V Y+ + +F++ + Sbjct: 124 RAFGTDPIAKLVMPRLLAALIMFVPLIALSDFAGLQTGALVAQYYHKLDPGIFWNSIYPR 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +KAP A I +V+ GF+ + +G+ +V S +V++ + Sbjct: 184 LLPMDFVVSFLKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVASSGLVLVANFYV 243 Query: 365 AIFYFAI 371 + F I Sbjct: 244 SKLVFDI 250 >gi|319942210|ref|ZP_08016526.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B] gi|319804263|gb|EFW01155.1| ABC-type transporter [Sutterella wadsworthensis 3_1_45B] Length = 259 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 134/264 (50%), Gaps = 10/264 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 NL +G ++ ++ G V++ G L +I Q++++G Sbjct: 2 IVNLLAQLGSWVLSLLSSVGRFGIFSGRVLARLGGA---------GLSPIISQIHFIGNY 52 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++ + G V+ QG + L +G+E L+++ +RE+G ++TA++ AGR+G+ Sbjct: 53 SLLIISVSGLFVGFVLGLQGYYVLVTYGSEEALGTLVALSLVRELGPVVTALLFAGRAGT 112 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEIG M+ E++ A+ MG+D +R + +PR IS+P+L ++ + IIGA +V Sbjct: 113 ALTAEIGLMRSGEQLAAMEMMGVDPIRRVFAPRFIGGFISMPILALIFSAVGIIGAWMVG 172 Query: 287 WKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 F+S+ S ++I G +K+ A+ ++A+ +G+A + + + Sbjct: 173 VLLIGTDNGAFWSQMESAVDVFSDICNGFVKSVVFGAAVTLIALYQGWASRPTPDGVARA 232 Query: 346 VTTCVVQSISIVIIIDSLFAIFYF 369 TT VV S +V+ +D + + F Sbjct: 233 TTTTVVVSSLLVLGLDFIMTAWMF 256 >gi|119356498|ref|YP_911142.1| hypothetical protein Cpha266_0663 [Chlorobium phaeobacteroides DSM 266] gi|119353847|gb|ABL64718.1| protein of unknown function DUF140 [Chlorobium phaeobacteroides DSM 266] Length = 264 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 116/243 (47%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + + K K + + Q G +P+V++ + G+++A Sbjct: 17 LKDFFLTMQEFFMFSVRAFLTIPKIKRYWRDFLDQATICGTDSIPIVLVSAISIGSLLAI 76 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ SI +RE+G LL +M++ R G+ AE+G+M+I+E+IDA+ Sbjct: 77 EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGARNGAELGAMQISEQIDAL 136 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A ++ LT L++F+ + A+ + Y+ + +F++ + Sbjct: 137 RAFGTDPVAKLVMPRLIAALVMFLPLTALSDFAGLHSAAYMAEHYHRLDPGMFWNAVYPR 196 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + G +KAP A I +V+ GF+ + +G+ +V S +V++ + Sbjct: 197 LAPKDFVVGFVKAPVFAIIITLVSSFNGFSARGGTAGVGRSTIKGIVVSSGLVLVANFYV 256 Query: 365 AIF 367 + Sbjct: 257 SKI 259 >gi|11465859|ref|NP_054003.1| hypothetical protein PopuCp208 [Porphyra purpurea] gi|1723414|sp|P51393|YCF63_PORPU RecName: Full=Probable ABC transporter permease protein ycf63 gi|1276859|gb|AAC08279.1| ORF263 [Porphyra purpurea] Length = 263 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 1/239 (0%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 +S A K SL Q+Y VG + + +L + V Q A + Sbjct: 16 TLSLFVSLLARLRTMKINTSSLAEQIYLVGPGSLNITLLTACFISMVFTMQIAKEFLHLD 75 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A ++ I RE+ +LTAV+IAG+ GS+ AEI +M+ E+IDA+ + + + Sbjct: 76 AASALGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDY 135 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ P++ A I LP+L+ ++ ++I + V + Y IP ++F ++++ F+ L Sbjct: 136 LVFPKVAACCIMLPILSTISLTASIAISIFVSFVMYGIPSSIFLKSAFLALSVSDFFSCL 195 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF-YFAIG 372 K+ I ++ + G + +G T+ VV + + I D + + F + + G Sbjct: 196 QKSLCFGTIIAFISCQWGLTSSGGAKGVGNSTTSSVVTILLTIFITDFILSYFMFQSTG 254 >gi|123969056|ref|YP_001009914.1| putative transporter, membrane component [Prochlorococcus marinus str. AS9601] gi|123199166|gb|ABM70807.1| possible transporter, membrane component [Prochlorococcus marinus str. AS9601] Length = 251 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 10/254 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F S I G I+ +K K L Q+ G + +V++ G Sbjct: 5 NFFKRLLSSLIIGGQAINFI-------FKGKISKNDLFDQLMESGPGSLLIVLITGIAAG 57 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E Sbjct: 58 TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +I+AI + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ Sbjct: 118 QIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177 Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 S + T ++ + LIK+ I I+A G +G T VV ++ Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237 Query: 357 VIIIDSLFAIFYFA 370 V ++D F Sbjct: 238 VSLMDVFLTQILFG 251 >gi|262202881|ref|YP_003274089.1| hypothetical protein Gbro_2988 [Gordonia bronchialis DSM 43247] gi|262086228|gb|ACY22196.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 285 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 111/252 (44%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + +G+ + +K + IRQ ++ + V +L++ G Sbjct: 28 HVMASFDTFGRQMGMFVEVFKVLFVDIFKRRFPFGEFIRQCAFMSSTSVFPTLLVAIPIG 87 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +++ Q + Q GA FS + +R+ L+T++++AG GSAI A++GS I + Sbjct: 88 VIVSIQVSNIAGQIGATSFSGAATGLGVIRQGAPLVTSLLLAGAVGSAIAADLGSRTIRD 147 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+R MG++ ++ LISPR+ A ++ LL F I + + Sbjct: 148 EIDAMRVMGVNPIQRLISPRLLATMVVSFLLCGFVCFVGFITGYAFNVYFQGGTPGSYTG 207 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F S A+ +++ L KA + +VA G + + V VV S+ ++ Sbjct: 208 TFASFASTSDLLFALGKAVIFGAIVAVVACDRGLSTKGGPAGVANSVNAAVVNSVLLLFT 267 Query: 360 IDSLFAIFYFAI 371 ++ + + + Sbjct: 268 VNVILTQLFAIL 279 >gi|326382581|ref|ZP_08204272.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL B-59395] gi|326198700|gb|EGD55883.1| hypothetical protein SCNU_06565 [Gordonia neofelifaecis NRRL B-59395] Length = 281 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 7/281 (2%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 + +R + + HI K F + ++I + K + Sbjct: 2 EAQPQVARRRWSDSGARRWFDEHIKKSFETFGRQLAMFVEVFKVLIEDIL-------KKR 54 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 IRQ ++ + V +L++ G +++ Q + Q GA FS + +R+ Sbjct: 55 FPFGEFIRQCAFMASTSVFPTLLVAIPIGVIVSIQVSNIAGQIGATSFSGAATGLGVIRQ 114 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 L+T++++AG GSAI A++GS I EEIDA+R MG++ ++ LISPR+ A ++ LL Sbjct: 115 GAPLVTSLLLAGAVGSAIAADLGSRTIREEIDAMRVMGVNPIQRLISPRLLATMVVSFLL 174 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 F I + + + F S A + ++ L+KA + IVA Sbjct: 175 CGFVCFVGFITGYLFNVYFQGGTPGSYTGTFASFAGVPDLLFALVKAVIFGAIVAIVACD 234 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G + + V VV S+ ++ ++ + + + Sbjct: 235 RGLSTSGGPAGVANSVNAAVVNSVILLFTVNVVLTQVFALV 275 >gi|226953846|ref|ZP_03824310.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] gi|294651661|ref|ZP_06728964.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] gi|226835406|gb|EEH67789.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ATCC 27244] gi|292822440|gb|EFF81340.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] Length = 258 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I + + +L ++ + KG I QMY VGV + Sbjct: 2 NTIAWLGRLVIERIKGIGAASLMLLQILFSMPS--------KGGFQRFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+ S+ ++ G+IK+ A VA+ +G+A + +T Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSIVFALICTWVAVYQGYACDPTPEGIATSMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|262373545|ref|ZP_06066823.1| toluene tolerance efflux transporter [Acinetobacter junii SH205] gi|262311298|gb|EEY92384.1| toluene tolerance efflux transporter [Acinetobacter junii SH205] Length = 258 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ + + + +L ++ + KG I QMY VGV + Sbjct: 2 NTIAWLGRLVIERVKGIGAASLMLIQILFSMPS--------KGGFQRFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIISVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+ S+ ++ G+IK+ A VA+ +G+A + +T Sbjct: 174 FLGVDEGSFWGGMQSSVQFGHDVVNGIIKSVVFALICTWVAVYQGYACDPTPEGIATSMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|226939988|ref|YP_002795061.1| ABC transport system permease protein [Laribacter hongkongensis HLHK9] gi|226714914|gb|ACO74052.1| probable ABC transport system permease protein [Laribacter hongkongensis HLHK9] Length = 261 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 126/261 (48%), Gaps = 1/261 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + I K + + LG + S IR++Y+ GV + Sbjct: 1 MLDGILKAVAGIGHRIIEGVWRLGFALRFLAAIVRHSGTALLRFQLTIREIYFAGVLSLI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 ++++ G V+ QG L +FG+ L+++ LRE+G +L A++ A RSGSA+ Sbjct: 61 IIVVSGTFVGMVLGLQGYTTLMRFGSADALGGLVALSLLRELGPVLAAILFASRSGSAMT 120 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AEIG MK E++DA+ M ++ V +++PR WA ++S+PLL L + I G V Sbjct: 121 AEIGLMKATEQLDAMAVMAVNPVARVVAPRFWAGVLSMPLLAALFSVMGIFGGYFVGVVM 180 Query: 290 YDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + ++S+ + +L ++ G+IK+ A+ ++A+ EG+ + + T Sbjct: 181 IGLDHGAYWSQMQAAVSLHEDVINGIIKSGVFGVAVTLIAVFEGYDAQPTAAGVSAATTR 240 Query: 349 CVVQSISIVIIIDSLFAIFYF 369 VV S +++ +D + F F Sbjct: 241 TVVTSALVILALDFVLTAFMF 261 >gi|120609708|ref|YP_969386.1| hypothetical protein Aave_1014 [Acidovorax citrulli AAC00-1] gi|326315802|ref|YP_004233474.1| hypothetical protein Acav_0985 [Acidovorax avenae subsp. avenae ATCC 19860] gi|120588172|gb|ABM31612.1| protein of unknown function DUF140 [Acidovorax citrulli AAC00-1] gi|323372638|gb|ADX44907.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 121/253 (47%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + S +G + Q++++G + ++ + G Sbjct: 8 DVGFATRSLLADMGRAARLFVRLAGLIGPTLQRFGLVRDQLHFLGNYSLSIISVSGLFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L ++G+ L+++ +RE+G +++A++ AGR+G+++ AEIG M+ E Sbjct: 68 FVLGLQGYYTLQRYGSAQALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEIGLMRAGE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++ A+ M +D VR +++PR WA +I++PLL + + +IG IV + F+ Sbjct: 128 QLSAMEMMAVDPVRRILAPRFWAGVIAMPLLAAVFSAVGVIGGWIVGVVMLGVDGGAFWG 187 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + S + ++ G++K+ + +A+ +G+ + + T VV + V+ Sbjct: 188 QMQSGVDVWADVGNGVLKSFVFGVTVTFIALLQGYIAKPTPEGVSRATTRTVVMASLTVL 247 Query: 359 IIDSLFAIFYFAI 371 +D L + F+I Sbjct: 248 GLDFLLTAWMFSI 260 >gi|305664611|ref|YP_003860898.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170] gi|88708628|gb|EAR00864.1| hypothetical protein FB2170_17306 [Maribacter sp. HTCC2170] Length = 265 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G E K+ +++++ + + ++I ISF G V+A Q Sbjct: 21 MNYLASIGSYAIMIKEVFRKPTKWSIMRSLILKEIDELIFGSLGILIFISFFIGGVVAIQ 80 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A ++ + + E ++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 81 TALNITSELIPKNLVGFATRQSIILEFAPTFCSIIMAGKVGSYITSSIGTMRVTEQIDAL 140 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I AL++ P + ++ + I G A F Sbjct: 141 EVMGVNALNYLVFPKIIALLL-YPFIIAISMYVGIFGGWFAGVFGGFSTSADFVEGVQLD 199 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK A + + GF + + +GK TT V + ++II++ + Sbjct: 200 FIPFHVTYSFIKTLVFAFILATIPSYHGFYMKGGALEVGKAATTSFVWTSVVIIILNYIL 259 Query: 365 AIFYFA 370 Sbjct: 260 TQLLLG 265 >gi|190576453|ref|YP_001974298.1| putative transmembrane component of ABC transporter protein [Stenotrophomonas maltophilia K279a] gi|254522804|ref|ZP_05134859.1| toluene tolerance protein [Stenotrophomonas sp. SKA14] gi|190014375|emb|CAQ48023.1| putative transmembrane component of ABC transporter protein [Stenotrophomonas maltophilia K279a] gi|219720395|gb|EED38920.1| toluene tolerance protein [Stenotrophomonas sp. SKA14] Length = 249 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + S + FL L R++Y +G +P++ + G V+ Sbjct: 3 FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ FGA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI + + VF+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|126696848|ref|YP_001091734.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9301] gi|126543891|gb|ABO18133.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9301] Length = 251 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 10/254 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F S I G I+ +K K L Q+ G + +V++ G Sbjct: 5 NFFKRLLSSLIIGGQAINFI-------FKGKISKNDLFDQLMESGPGSLLIVLITGIAAG 57 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E Sbjct: 58 TVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTE 117 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +I+AI + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ Sbjct: 118 QIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWT 177 Query: 300 RFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 S + T ++ + LIK+ I I+A G +G T VV ++ Sbjct: 178 SVRSGNVSLTSTDLTSMLIKSVVFGLLIAIIACGYGLTTKGGPKEVGTSTTGAVVMTLVT 237 Query: 357 VIIIDSLFAIFYFA 370 V ++D F Sbjct: 238 VSLMDVFLTQILFG 251 >gi|297191127|ref|ZP_06908525.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721749|gb|EDY65657.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 272 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 7/250 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVILISF 176 + + Q G ++ TG K L L + G V V+ +SF Sbjct: 12 LEELGRQLVFYGRSLAWTGRTLRRYK--KETLRLLAEVSFGRGALAVVGGTVGVIAFLSF 69 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG + QG L+Q G F L + REI L+ + ++ G+ A++G+M+ Sbjct: 70 FTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMR 129 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ A + YY Sbjct: 130 ISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYYGQSAGT 189 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + F ++ K A I +V G+ +G V V SI Sbjct: 190 YDHYFQQYLPPVDVLWSFGKVIVFAVVIILVHCYYGYYASGGPAGVGVAVGRAVRTSIVA 249 Query: 357 VIIIDSLFAI 366 + I+D ++ Sbjct: 250 INILDFFLSL 259 >gi|298372676|ref|ZP_06982666.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298275580|gb|EFI17131.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 248 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + ++ ++ F L ++ +G++ V +++LIS G ++ Sbjct: 2 VKKLLTTTGRYVQLMRQTFSAPDNWRVFWRQLPSEIEKLGINTVGIIVLISIFMGVIMTM 61 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + ++ L E + ++++AG+ GS I +EIG+M+I E+IDA Sbjct: 62 QTVMNTENPMLPRYSTGLVLRDTLLLEFSSTIMSLLLAGKVGSNIASEIGTMRITEQIDA 121 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I L+I +P+L L+ F + G V I + F Sbjct: 122 LDIMGINSANYLILPKIIGLMICMPMLVTLSVFLGLAGGCGVAVFTDMITLSDFIYGIQY 181 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +IK+ F I V+ G+ + +G+ T VV S + + + L Sbjct: 182 AFVPYYFTYSIIKSFFFGFIISSVSAFYGYYAYGGALDVGRASTNAVVNSSILTLAANVL 241 Query: 364 FAIFYFA 370 Sbjct: 242 LTQLLLV 248 >gi|110596847|ref|ZP_01385137.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM 13031] gi|110341534|gb|EAT59994.1| Protein of unknown function DUF140 [Chlorobium ferrooxidans DSM 13031] Length = 264 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 116/244 (47%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 + + + K + ++ Q G +P+V++ + GA++A Sbjct: 16 QLKDFFLTMQEFFLFSLRTFMAIPKTIRYWRDVLDQATICGTDSIPIVLVSAISIGALLA 75 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 + L FGA+ ++ +RE+G LL +M++ R GS AE+G+M+I+E+IDA Sbjct: 76 IEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDA 135 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 +R G D + L+ PR+ A +I LT L++F+ + A+ + Y+ I +F++ + Sbjct: 136 LRAFGTDPIAKLVMPRLVAALIMFLPLTALSDFAGLQSAAYMAEHYHRIDPGIFWNAVYP 195 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + G +KAP A I +V+ GF+ + +G+ +V S +V+I + Sbjct: 196 RLAPKDFVVGFLKAPVFAVIITLVSSFNGFSARGGTAGVGRATIKGIVVSSGLVLIANFY 255 Query: 364 FAIF 367 + Sbjct: 256 VSKI 259 >gi|325922508|ref|ZP_08184271.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325924178|ref|ZP_08185738.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325545309|gb|EGD16603.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] gi|325547016|gb|EGD18107.1| conserved hypothetical integral membrane protein [Xanthomonas gardneri ATCC 19865] Length = 249 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 MVESIRAFGRAGLFSLTVLRGSVPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|90994584|ref|YP_537074.1| hypothetical protein 26 [Porphyra yezoensis] gi|122194637|sp|Q1XD94|YCF63_PORYE RecName: Full=Probable ABC transporter permease protein ycf63 gi|90819148|dbj|BAE92517.1| unnamed protein product [Porphyra yezoensis] Length = 263 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 113/236 (47%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 I K +L+ Q+Y VG + + +L + V Q A + Sbjct: 16 TIRLFFRLLIRLKTIKVNTNNLVEQIYIVGPGSLNITLLTACFISMVFTMQIAKEFLYLD 75 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A ++ I RE+ +LTAV+IAG+ GS+ AEI +M+ E+IDA+ + + + Sbjct: 76 AASAIGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPIDY 135 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ P++ + + LP+L+I++ ++I + V + YDIP +VF + ++++ L Sbjct: 136 LVFPKVASCFLMLPILSIISLTASIAISLFVAFVMYDIPSSVFLKSAFNALSISDFLICL 195 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ F A IG ++ + G + +G T+ VV + V I D + + F F Sbjct: 196 EKSMFFAIIIGFISCQWGLTSNGGAKGVGNSTTSSVVTILFTVFITDFVLSYFMFQ 251 >gi|221069030|ref|ZP_03545135.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220714053|gb|EED69421.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 258 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG + + + A +L ++ G + Q++++G + Sbjct: 2 NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L ++G+ ++++ LRE+G ++TA++ AGR+G+A+ Sbjct: 55 AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D V+ +++PR WA +I++PLL + + ++G +V Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+ + ++ G++K+ A+ VA+ +G+A + + T Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLQGYAAKPTPEGVSRATT 234 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV + V+ +D L F+I Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258 >gi|315927603|gb|EFV06934.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 194 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 117/194 (60%) Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q A+QL+QFGA IF +DLM I RE+ L+ A++IAGRS S+ A+IG MKI + Sbjct: 1 MVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAGRSASSYTAQIGVMKITD 60 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EI A+ TMG ++ PR+ AL++++PL+ +++ +IIG +V DI FA F Sbjct: 61 EIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISIIGGMMVAKLNLDISFAEFLR 120 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 RF + +IF GL KAP IG++A GF V + S+G T VV +I VI Sbjct: 121 RFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNTTQSIGIYTTKSVVNAIFWVIA 180 Query: 360 IDSLFAIFYFAIGI 373 D+LF++ + GI Sbjct: 181 FDALFSVILTSTGI 194 >gi|218262319|ref|ZP_03476833.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii DSM 18315] gi|218223470|gb|EEC96120.1| hypothetical protein PRABACTJOHN_02507 [Parabacteroides johnsonii DSM 18315] Length = 248 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 2/240 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H +G + + + ++ F LI+++Y +GV + +VI+IS G VIA Q + Sbjct: 4 ALHQVGEYVMLMAKCISVPNRWSMFFKQLIKEIYKLGVDSLWIVIIISIFIGTVIAIQIS 63 Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +S F + L E + ++++AG+ GS I +EIG+M++ E+IDA+ Sbjct: 64 LNISSPLIPKFTIGYTTREIILLEFSSSIMSLILAGKVGSNIASEIGTMRVTEQIDAMEI 123 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVFFSRFHSTA 305 MG++ LI P++ ++ +P+L I + F+ I+G + A F Sbjct: 124 MGVNSANFLILPKMVGMMTFIPVLVIFSMFTGILGGIAASHSTGTGMTPASFEYGLQFYF 183 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 I+ +IK+ A I +A G+ V + +GK T VV S ++++ D + Sbjct: 184 NEFYIWYSIIKSVVYAFIISSIAAYFGYNVKGGALEVGKASTNAVVMSSIMILLADVILT 243 >gi|264676838|ref|YP_003276744.1| hypothetical protein CtCNB1_0702 [Comamonas testosteroni CNB-2] gi|299529658|ref|ZP_07043095.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44] gi|262207350|gb|ACY31448.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] gi|298722521|gb|EFI63441.1| hypothetical protein CTS44_02750 [Comamonas testosteroni S44] Length = 258 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 8/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N IG + + + A +L ++ G + Q++++G + Sbjct: 2 NFLARIGLAVRCQLVNMGIGARLLWRLLGLMGPALRRP-------RLIGDQIHFLGNYSL 54 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG + L ++G+ ++++ LRE+G ++TA++ AGR+G+A+ Sbjct: 55 AIIGVSGLFVGFVLGLQGYYILQRYGSAEALGMMVALSLLRELGPVVTALLFAGRAGTAL 114 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ A+ M +D V+ +++PR WA +I++PLL + + ++G +V Sbjct: 115 TAEIGLMKAGEQLSAMEMMAVDPVKRILAPRFWAGLITMPLLAAVFSAVGVLGGWLVGVV 174 Query: 289 YYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F+ + ++ G++K+ A+ VA+ EG+A + + T Sbjct: 175 MIGVDSGAFWGQMQQGVDWWSDLGNGVLKSFVFGLAVTFVALLEGYAAKPTPEGVSRATT 234 Query: 348 TCVVQSISIVIIIDSLFAIFYFAI 371 VV + V+ +D L F+I Sbjct: 235 RTVVVASLAVLGLDFLLTATMFSI 258 >gi|262042753|ref|ZP_06015907.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039978|gb|EEW41095.1| toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 260 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHRGIKTTATFGRAGLMLFNAVVGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGL 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGSVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I G ++V + I Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGALVGVSWKGIDGGF 184 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F++ + ++ LIK+ A + +A+ G+ S + + T VV + Sbjct: 185 FWTAMQNAVDWRMDLVNCLIKSLVFAITVTWIALFNGYDAVPTSAGISRATTRTVVHASL 244 Query: 356 IVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 245 AVLGLDFVLTALMFG 259 >gi|110638590|ref|YP_678799.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406] gi|110281271|gb|ABG59457.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406] Length = 243 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 1/230 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G KF + I + +G + + +V ++S GAV Q A Sbjct: 1 MKSFGKYMILMGSLFVRREKFSVYWKLTIDECILIGTNSIFIVAIVSSFIGAVTCIQTAA 60 Query: 189 QLSQFGAEIFSIDLMSILQ-LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L I+ + + + E+ T V++AG+ GS+I ++G+M+I E++DA+ M Sbjct: 61 NLVSPLVPIYVVASVVREMSILELAPTFTCVVLAGKVGSSIAGQLGTMRITEQVDALEVM 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I A +I++P+L A +I+G I I F Sbjct: 121 GINSASYLILPKILASLITIPMLVTFAGLLSILGGYIAGILGNIITTQDFVYGVQIDFNE 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 N+ LIKA A I ++ +G+ + +G+ TT VV S V Sbjct: 181 FNVTFALIKAFVFAFLISSISAYQGYFTKGGALEVGQSSTTAVVNSCIGV 230 >gi|78186330|ref|YP_374373.1| putative ABC transport system permease protein [Chlorobium luteolum DSM 273] gi|78166232|gb|ABB23330.1| putative ABC transport system permease protein [Chlorobium luteolum DSM 273] Length = 256 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 118/243 (48%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + A+ K + + + Q G +P+V++ + G+++A Sbjct: 9 IKGFFLTMQDFFFFSVRAFATMPKIRRYWRDFLDQAAICGADSIPIVLVSAISIGSLLAI 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L FGA+ SI +RE+G LL +M++ R GS AE+G+M+I+E+IDA+ Sbjct: 69 EVGNLLEDFGAKTMLGRSTSISVIRELGPLLMGLMLSARFGSRNGAELGAMQISEQIDAL 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R G D V L+ PR+ A +I LT L++F+ + A+ + Y+ + +F++ + Sbjct: 129 RAFGTDPVAKLVMPRLLAALIMFLPLTALSDFAGLYSAAYMAEHYHHLDPGIFWNSVYPR 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 L + G KAP A I +V+ GF+ ++ +G+ +V S +V+I + Sbjct: 189 LALKDFVVGFAKAPVFAVIITLVSSFNGFSASGGTSGVGRSTIKGIVVSSGLVLIANFYV 248 Query: 365 AIF 367 + Sbjct: 249 SKI 251 >gi|91070390|gb|ABE11304.1| putative transporter, membrane component [uncultured Prochlorococcus marinus clone HF10-88H9] Length = 251 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 10/255 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + F S I G I+ +K K L Q+ G + +V++ Sbjct: 4 LNFFKRLLSSLIIGGQAINFI-------FKGKISKNDLFDQLMESGPGSLLIVLITGIAA 56 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G V Q A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ Sbjct: 57 GTVFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVT 116 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 E+I+AI + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF+ Sbjct: 117 EQIEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFW 176 Query: 299 SRFHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + S + T ++ + LIK+ I I+A G +G T VV ++ Sbjct: 177 TSVRSGNVSLTSTDLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLV 236 Query: 356 IVIIIDSLFAIFYFA 370 V ++D F Sbjct: 237 TVSLMDVFLTQILFG 251 >gi|330996070|ref|ZP_08319964.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila YIT 11841] gi|329574067|gb|EGG55645.1| hypothetical protein HMPREF9442_01039 [Paraprevotella xylaniphila YIT 11841] Length = 248 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + F I++M +GV + +V+LISF GAVI Q Sbjct: 7 LATFGRYLMLMGRTFSRPERMRMFFKQYIKEMSQLGVDSIGIVLLISFFIGAVICIQIKL 66 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + L E + +++AG+ GS I +EIG+M++ ++IDA+ M Sbjct: 67 NIQSPWMPKFVTGYTTREIMLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 126 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P++ ++ +P L + FS +GA I Sbjct: 127 GVNSANYLILPKVLGMMTMMPFLVCFSIFSGFVGAYATSIIGQVITMDDLTLGLQHDFNE 186 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ G IK+ F A I V+ G+ V S +GK T VV S +++ D L Sbjct: 187 WYVWMGFIKSIFFAFVITSVSAFYGYTVEGGSVEVGKASTDSVVSSSVLILFSDVLLTQL 246 Query: 368 YF 369 Sbjct: 247 LS 248 >gi|325915573|ref|ZP_08177883.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] gi|325538211|gb|EGD09897.1| hypothetical integral membrane protein [Xanthomonas vesicatoria ATCC 35937] Length = 249 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|320007322|gb|ADW02172.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC 33331] Length = 282 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 30 LLAPLRQTGQLFALALAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 89 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG +GSAI A++GS KI EE+DA+ Sbjct: 90 QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 149 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G + + F + Sbjct: 150 EVMGVSPVQRLVVPRVLATMFVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 209 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ G +KA GIVA G +G V VV + ++ ++ + Sbjct: 210 AQLPDLYVGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMVL 269 Query: 365 AIFYFAI 371 Y I Sbjct: 270 TAIYLQI 276 >gi|119946509|ref|YP_944189.1| ABC-type transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865113|gb|ABM04590.1| ABC-type transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 234 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 63/222 (28%), Positives = 120/222 (54%), Gaps = 1/222 (0%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 I Q++ +G+ +P+++ G V++ QG L + AE ++++ LR Sbjct: 12 PKLFPLFIGQIFQLGILSLPIILTAGLFIGMVLSLQGYNVLVDYAAEESLGSMVALSLLR 71 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G ++TA++ AGR+GSA+ AEIG M+ E+I ++ M + ++ +I+PR A I++LPL Sbjct: 72 ELGPVVTALLFAGRAGSALTAEIGLMQSTEQIASMEMMAVSPLKRVIAPRFLAGIVTLPL 131 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT-LANIFTGLIKAPFMACAIGIVA 328 LT++ N AI G ++ + + ++S + L ++ G+IK+ I VA Sbjct: 132 LTLMFNVVAIWGGYLIGVSWMGVDGGAYWSVMQGSVDYLPDVMNGVIKSIVFGVMITWVA 191 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + G+ V ++ + + T VV S +V+ +D + +F F Sbjct: 192 LYNGYYVMPNAIGISRSTTQTVVVSSLLVLAMDFILTVFMFG 233 >gi|188579086|ref|YP_001916015.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523538|gb|ACD61483.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 249 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G + I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTTALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|262280246|ref|ZP_06058030.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus RUH2202] gi|262258024|gb|EEY76758.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus RUH2202] Length = 258 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L ++ + G I QM+ VGV + Sbjct: 2 NAIAWLGRLVIERIRGIGVAALMLVQIVFSFPTT--------GGFGRFIYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNIGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA ++SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|311741974|ref|ZP_07715784.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311314467|gb|EFQ84374.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 288 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 104/278 (37%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 + S ++G + G+ + + + + Sbjct: 8 SRPEGDTPNEPTPPTRAEIEREALTFNPFAKVLSGFGLVGNFYNFCGKTFRTMFTRRPVV 67 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 +++Q +++ + I++S +I Q L Q GA + ++ +REIG Sbjct: 68 DEIVQQAWFISSVSIMPAIMVSIPLCMIIVFQVNQLLIQIGAVDLAGAGAAVAVIREIGP 127 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +++ +++AG +A+ A++G+ KI +EIDA+ T+G+D + L+ PR+ A L + Sbjct: 128 IVSVLVVAGAGATAVCADLGARKIRDEIDAMETLGIDPIHRLVVPRVIASTFIAVALNGM 187 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + GA +F + + +KA G+ G Sbjct: 188 VSIVGLAGAYYFSVVLQGATPGLFIDGLTLLVGTPDFWASSLKAAIFGLLAGLAGCYLGL 247 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G V VV + ++ +++ + + Sbjct: 248 NAKGGPKGVGDAVNQTVVLAFLMLFAANTVITTIFLQL 285 >gi|21245052|ref|NP_644634.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str. 306] gi|294627465|ref|ZP_06706049.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664971|ref|ZP_06730282.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21110783|gb|AAM39170.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598286|gb|EFF42439.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605249|gb|EFF48589.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 249 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|50086238|ref|YP_047748.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49532214|emb|CAG69926.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 258 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ + A +L ++ + G I QMY VGV + Sbjct: 2 NAIAWLGRLVIERVRGIGVAALMLLQILFSMPST--------GGFRRFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G VI QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVIGLQGYSILVNVGSEAMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGILGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S S ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQSNVQFGHDVVNGIIKSIVFALVCTWIAVYQGYACDPTPEGIATSMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGSDFVLTAVMFG 256 >gi|291515429|emb|CBK64639.1| ABC-type transport system involved in resistance to organic solvents, permease component [Alistipes shahii WAL 8301] Length = 247 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 ++G G+ + K + +I +M +GV+ + + +IS GAVI Sbjct: 1 MLKIFELIGRYFMLMGKVFSRPEKAAIYRRRIIFEMESLGVNSIGLTAIISVFIGAVITL 60 Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q L F + E + A+++AG+ GS+I +EIG+M+I E+IDA Sbjct: 61 QMCINLDSPFIPRSLVGYATRETMILEFSSAVVALILAGKVGSSIASEIGTMRITEQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A ++ P LTIL+ I+G ++ + A + Sbjct: 121 LEIMGVNSASYLILPKIVAAMVFFPFLTILSILIGILGGYLIAAATGIMIPADYVDGLLM 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I LIK F A I ++ G+ +S +G T VV S ++++ D + Sbjct: 181 DFKPYSITYTLIKTVFFAYIITSISAFYGYNARGNSLEVGTASTRAVVASCVVILLFDLI 240 Query: 364 FAIFYF 369 Sbjct: 241 LTQVLL 246 >gi|21233625|ref|NP_639542.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770590|ref|YP_245352.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. 8004] gi|21115493|gb|AAM43424.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575922|gb|AAY51332.1| toluene tolerance protein [Xanthomonas campestris pv. campestris str. 8004] Length = 249 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|89255923|ref|YP_513285.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115314405|ref|YP_763128.1| toluene ABC transporter ATP-binding/membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|167009174|ref|ZP_02274105.1| toluene ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|169656537|ref|YP_001427977.2| toluene tolerance protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367281|ref|ZP_04983308.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|290953704|ref|ZP_06558325.1| putative ABC transport system permease protein [Francisella tularensis subsp. holarctica URFT1] gi|295312939|ref|ZP_06803658.1| putative ABC transport system permease protein [Francisella tularensis subsp. holarctica URFT1] gi|89143754|emb|CAJ78956.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129304|gb|ABI82491.1| toluene ABC superfamily ATP binding cassette transporter, membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|134253098|gb|EBA52192.1| ABC transporter, membrane protein [Francisella tularensis subsp. holarctica 257] gi|164551605|gb|ABU61021.2| toluene tolerance protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 254 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 122/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ + I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILASFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV ++ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252 >gi|289662322|ref|ZP_06483903.1| toluene tolerance protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 249 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|119897098|ref|YP_932311.1| hypothetical protein azo0807 [Azoarcus sp. BH72] gi|119669511|emb|CAL93424.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 263 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 124/254 (48%), Gaps = 1/254 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + S LG S + + +R++Y+ GV + ++++ Sbjct: 7 ALRRLGGMSIDAVWRLGFATRFLLMVLVYSGQSVRRIHLTLREIYFAGVLSLLIILVSGL 66 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L +FG+ L+++ RE+G ++ A++ A R+GSA+ AEIG MK Sbjct: 67 FVGLVLGLQGYETLQRFGSSDALGVLVALSLTRELGPVVAALLFASRAGSAVTAEIGLMK 126 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ A+ M ++ + +++PR W +IS+PLL + + + G ++ + + Sbjct: 127 ATEQLKAMDMMAVNPLARVVAPRFWGGVISMPLLAAMFSAMGVFGGWLIGVVFIGVDDGA 186 Query: 297 FFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S+ + + ++ G+IK+ A+ ++A+ EG+ + + + +T VV S Sbjct: 187 FWSQMQAAVDVRYDVLNGVIKSFVFGVAVSLIAVFEGYDCTPTAEGVSRAITRTVVSSAL 246 Query: 356 IVIIIDSLFAIFYF 369 ++ +D + F F Sbjct: 247 AILALDFVLTSFMF 260 >gi|289667685|ref|ZP_06488760.1| toluene tolerance protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 249 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSVRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVYVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|166710003|ref|ZP_02241210.1| ABC transporter permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 249 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|293610802|ref|ZP_06693102.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827146|gb|EFF85511.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123627|gb|ADY83150.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 258 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L ++ + G I QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGVAALMLLQIVFSFPSS--------GGFGRFIYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA ++SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGVVSLPMLTVIFAAIGIVGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVYQGYACDPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|317968902|ref|ZP_07970292.1| putative transporter, membrane component [Synechococcus sp. CB0205] Length = 257 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 109/239 (45%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G+ ++ K + LI ++ G ++++ G V Q A +L Sbjct: 18 LGESLLIGGQAVSALAKGQINPNDLIAELMEAGPGSFLIILITGLAAGTVFNIQAASELV 77 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA ++++ REI +LTA ++ G+ +A A++G+MK+ E+IDAI + D Sbjct: 78 KQGAGSTVGGILALGLAREIAPILTATLVTGKVATAYAAQLGTMKVTEQIDAITMLRTDP 137 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A+++ P+ + AI + Y+IP VF++ +++ Sbjct: 138 VQYLVVPRLLAMVVMTPVQCLAFFGVAIWSGQVSSAILYNIPPDVFWTSVRGWMQPSDLP 197 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 L+KA I ++A G +G T VV + V ++D + F Sbjct: 198 AMLLKAGVFGLQIAVIACGWGLTTRGGPKEVGTSTTGAVVMILVTVSLMDVVLTQLLFG 256 >gi|146298213|ref|YP_001192804.1| hypothetical protein Fjoh_0449 [Flavobacterium johnsoniae UW101] gi|146152631|gb|ABQ03485.1| protein of unknown function DUF140 [Flavobacterium johnsoniae UW101] Length = 248 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 98/247 (39%), Gaps = 2/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G E K+ + +++ + + + +V ISF G V+A Sbjct: 3 LIRYLSQIGKYFLMLKEIFNKQTKWPVMKNLIFKEIDDLIIDSLGIVCFISFFIGGVVAI 62 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A L+ + + E +V++AG+ GS I + IG+M++ E+IDA Sbjct: 63 QTALNLTNPLIPKYLIGFATRQSVVLEFAPTFISVIMAGKMGSYITSSIGTMRVTEQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ V L+ P+I AL + P + ++ F I G + A F Sbjct: 123 LEVMGVNSVNYLVFPKIIAL-LMYPFVIGISMFLGIFGGWLACAYGGFSTGADFIMGAQK 181 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I IK A + + G+ + + +GK TT V + +I+++ + Sbjct: 182 DFIPFHITYAFIKTLIFAMLLATIPSFHGYYMKGGALEVGKASTTSFVWTSVTIILLNYI 241 Query: 364 FAIFYFA 370 Sbjct: 242 LTQLLLG 248 >gi|302036847|ref|YP_003797169.1| putative ABC transporter permease [Candidatus Nitrospira defluvii] gi|300604911|emb|CBK41244.1| putative ABC transporter, permease component [Candidatus Nitrospira defluvii] Length = 291 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 2/277 (0%) Query: 90 RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKF 149 R + + + + +G+K + + A + + + + Sbjct: 13 RHESSLGPTVLLHEKDGLQRMIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGR 70 Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 L L+RQ+ + GV +PV +I+ + G +I Q QL + GA ++ + +R Sbjct: 71 GETLRVLVRQILFTGVDALPVTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIR 130 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+G L+TA ++ GRSG+AI E+G+M + E+ A+R MG+ R +I PR+ +++S+ Sbjct: 131 ELGPLITAFIVVGRSGTAIATELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLC 190 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 LT+ + A++G ++ IPF F + ++ IK A+ + Sbjct: 191 LTLYFDVVAVLGGYLIADAQLTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICC 250 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 G AV + ++ T ++ S + ++ID + + Sbjct: 251 YHGLAVRSSFTEVPQQTTRAMINSFVLCLLIDVVVTV 287 >gi|225677253|ref|ZP_03788238.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590703|gb|EEH11945.1| hypothetical protein WUni_007540 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 187 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 93/185 (50%) Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q + E L++I ++E+G +L ++++ G+ GS++ AEIG+M+I E+ID Sbjct: 1 SLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQID 60 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 + T+ ++ + LI+PRI A II P+LT+ A+ I G I ++ ++ Sbjct: 61 VLTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFEFNHNLNIYIKHTA 120 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + TGLIKA I + + G+ + +G T+ VV S ++I+ + Sbjct: 121 QFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANY 180 Query: 363 LFAIF 367 + + Sbjct: 181 MITLI 185 >gi|188993823|ref|YP_001905833.1| putative transporter [Xanthomonas campestris pv. campestris str. B100] gi|167735583|emb|CAP53801.1| putative transporter [Xanthomonas campestris pv. campestris] Length = 249 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 IAESIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|124026456|ref|YP_001015571.1| putative transporter, membrane component [Prochlorococcus marinus str. NATL1A] gi|123961524|gb|ABM76307.1| possible transporter, membrane component [Prochlorococcus marinus str. NATL1A] Length = 249 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 66/235 (28%), Positives = 106/235 (45%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 I G+ AS K LI Q+ G +V++ G V Q A +LS+ G Sbjct: 15 ILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGL 74 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 L++I REI LLTA ++ G+ +A A+IG+MK+ E+IDAI + D V L Sbjct: 75 GSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYL 134 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A+++ P+ +L A+ Y IP ++F++ +++ L+ Sbjct: 135 VVPRLCAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLPFMLV 194 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 KA I I+A G +G T VV ++ V ++D L F Sbjct: 195 KALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFG 249 >gi|187931162|ref|YP_001891146.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712071|gb|ACD30368.1| ABC-type transport system permease protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 254 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++ + M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSFKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|255319835|ref|ZP_05361040.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SK82] gi|262380367|ref|ZP_06073521.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SH164] gi|255303154|gb|EET82366.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SK82] gi|262297813|gb|EEY85728.1| toluene tolerance efflux transporter [Acinetobacter radioresistens SH164] Length = 258 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ + +L +I + + + I QMY VGV + Sbjct: 2 NAVAWLGRLVIERVRGIGVATLMLLQIIFSLPTWLG--------VKLFIYQMYRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++++ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSEAMLGTMVALTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRIVSPRLWAGIVSLPMLTVIFGAVGILGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S S+ ++ G+IK+ A +A+ +G+A S + T Sbjct: 174 FLGVDEGSFWSGMQSSVQFGHDVVNGIIKSTVFALICTWIAVYQGYACEPTSEGIATSTT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVFSSLCVLGFDFVLTAVMFG 256 >gi|58579932|ref|YP_198948.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84621937|ref|YP_449309.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424526|gb|AAW73563.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365877|dbj|BAE67035.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 249 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FVDSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G + I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYVEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|295088056|emb|CBK69579.1| ABC-type transport system involved in resistance to organic solvents, permease component [Bacteroides xylanisolvens XB1A] Length = 235 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 1/235 (0%) Query: 137 SNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE 196 G + + + F + ++ +GV+ + +V+LISF GAVI Q + Sbjct: 1 MLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITIQIKLNIESPWMP 60 Query: 197 IF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ MG++ L Sbjct: 61 RWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIMGINSANYL 120 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 I P+I A++ +P+L + F+ IIGA W + I+ G+I Sbjct: 121 ILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQYMFVEWFIWAGII 180 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 KSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDAVVSSSVLILFADLILTKLLMG 235 >gi|254368757|ref|ZP_04984770.1| ABC-type transport system permease protein [Francisella tularensis subsp. holarctica FSC022] gi|157121678|gb|EDO65848.1| ABC-type transport system permease protein [Francisella tularensis subsp. holarctica FSC022] Length = 254 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 121/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV ++ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSILGADLILTSIMFG 252 >gi|72382734|ref|YP_292089.1| putative transporter, membrane component [Prochlorococcus marinus str. NATL2A] gi|72002584|gb|AAZ58386.1| Protein of unknown function DUF140 [Prochlorococcus marinus str. NATL2A] Length = 249 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 107/235 (45%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 I G+ AS K LI Q+ G +V++ G V Q A +LS+ G Sbjct: 15 ILIGGQAIASIAKGNINKSDLIDQLMEAGPGSFLIVLITGIAAGTVFNIQVAAELSKQGL 74 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 L++I REI LLTA ++ G+ +A A+IG+MK+ E+IDAI + D V L Sbjct: 75 GSAVGGLLAIGMAREIAPLLTATLLTGKVATAYAAQIGTMKVTEQIDAITMLQTDPVEYL 134 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI A+++ P+ +L A+ Y IP ++F++ +++ L+ Sbjct: 135 VVPRICAMVVMAPIQCLLFFSIALFSGQFSSTILYQIPPSIFWNSVREWLITSDLPFMLV 194 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 KA I I+A G +G T VV ++ V ++D L FA Sbjct: 195 KALVFGLLIAIIACGWGLTTRGGPKEVGSSTTGAVVMTLITVSLVDVLLTQVLFA 249 >gi|325927586|ref|ZP_08188818.1| putative integral membrane protein [Xanthomonas perforans 91-118] gi|325542051|gb|EGD13561.1| putative integral membrane protein [Xanthomonas perforans 91-118] Length = 249 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFMAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|319761579|ref|YP_004125516.1| hypothetical protein Alide_0863 [Alicycliphilus denitrificans BC] gi|330823447|ref|YP_004386750.1| hypothetical protein Alide2_0819 [Alicycliphilus denitrificans K601] gi|317116140|gb|ADU98628.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] gi|329308819|gb|AEB83234.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 260 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 121/248 (48%), Gaps = 1/248 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S+ LG+ + Q++++G + ++ + G V+A Sbjct: 13 VRSKLADLGMGARLFVRLVGLFGTAMRRFGLVRDQVHFLGNYSLSIIAMSGLFVGFVLAL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L +G+ ++++ +RE+G ++TA++ AGR+G+++ AEIG M+ E++ A+ Sbjct: 73 QGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAEIGLMRAGEQLSAM 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V+ +++PR W +I++PLL + + +IG +V + F+ + S+ Sbjct: 133 EMMAVDPVQRILAPRFWGGVIAMPLLAAVFSAVGVIGGWLVGVVLIGVDGGAFWGQMQSS 192 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++ G++K+ A+ +A+ +G+ + + T VV + V+ +D + Sbjct: 193 VDVWKDVGNGVVKSVVFGVAVTFIAVLQGYMAKPTPEGVSRATTRTVVMASLTVLGLDFV 252 Query: 364 FAIFYFAI 371 F+I Sbjct: 253 LTALMFSI 260 >gi|78050007|ref|YP_366182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038437|emb|CAJ26182.1| ABC transporter permease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 249 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + S + F+ L+R++Y VG +P++ + G V+ Sbjct: 3 FADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI G I F+S ++ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDVWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|239945573|ref|ZP_04697510.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] gi|239992040|ref|ZP_04712704.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379] Length = 293 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 41 LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 100 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++I+G +GSAI A++GS KI EE+DA+ Sbjct: 101 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSRKIREELDAM 160 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 161 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 220 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 221 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 280 Query: 365 AIFYFAI 371 Y I Sbjct: 281 TAIYLQI 287 >gi|226227980|ref|YP_002762086.1| putative transporter [Gemmatimonas aurantiaca T-27] gi|226091171|dbj|BAH39616.1| putative transporter [Gemmatimonas aurantiaca T-27] Length = 264 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 68/245 (27%), Positives = 112/245 (45%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + H G + ++ IRQM +GV VP+ ++++ G V A Sbjct: 15 TAGLLHAFGRRAYFARDIARGLRDPGTWIPETIRQMQRIGVESVPLTVIVAAFLGGVTAF 74 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +QL + + E+G LLTA+++ GR G+ + AEIG+M++ E+IDA+ Sbjct: 75 QTRYQLFPGVQLSVVGLIARQSIVLELGPLLTALVLTGRVGARMTAEIGTMRVTEQIDAL 134 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+ D V L +PR A ++ LP L +LAN +AI A + D+ + F Sbjct: 135 ETLAFDPVAYLATPRFIAGVVMLPTLVMLANATAIFSAWATLVLATDVRTSDFLGGLRLA 194 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T + LIKA AI V EG+ + +GK VV + ++++D++ Sbjct: 195 FTAFQVVYSLIKATCFGAAIAFVCSYEGYVTEAGAEGVGKSTALAVVIASVSILVLDAIV 254 Query: 365 AIFYF 369 A Sbjct: 255 AAVLA 259 >gi|326799081|ref|YP_004316900.1| hypothetical protein Sph21_1668 [Sphingobacterium sp. 21] gi|326549845|gb|ADZ78230.1| protein of unknown function DUF140 [Sphingobacterium sp. 21] Length = 244 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 1/241 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + K + ++ +M +GV + ++ +IS GAV+ Q A Sbjct: 2 FFTSFGKYLLLLKSVFKKPEKASIYWKEIMHEMNSIGVGSLGLIAIISTFIGAVMTMQIA 61 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL S + + E+ ++A+++AG+ GS+I ++IGSM++ E+IDA+ Sbjct: 62 FQLVSDLIPNSIIGQINRDSSILELSPTISALVLAGKVGSSISSQIGSMRVTEQIDALEI 121 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A I +P+L IL+ F A+ G I + A + Sbjct: 122 MGINAPGYLILPKILAGITMVPVLVILSIFLALSGGLIGGALSGAVTPADYIMGITGDFN 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + L+KA I VA GF V + +G+ T VV S +++ D + Sbjct: 182 GYTVAVALVKAFVFGFVITSVAAYHGFYVKGGALEVGQASTKSVVVSCIMILATDYVITA 241 Query: 367 F 367 Sbjct: 242 L 242 >gi|194367789|ref|YP_002030399.1| hypothetical protein Smal_4017 [Stenotrophomonas maltophilia R551-3] gi|194350593|gb|ACF53716.1| protein of unknown function DUF140 [Stenotrophomonas maltophilia R551-3] Length = 249 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + S + FL L R++Y +G +P++ + G V+ Sbjct: 3 FVQATRSLGRAGLFSLTVLRGSLPTRDFLAELTREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ FGA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTFGAADALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI + + VF+S + Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAVHVLGLDNGVFWSALRGS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSAMLF 248 >gi|39996027|ref|NP_951978.1| ABC transporter permease [Geobacter sulfurreducens PCA] gi|39982792|gb|AAR34251.1| ABC transporter, permease protein, putative [Geobacter sulfurreducens PCA] Length = 256 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 119/246 (48%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + S + ++ G+ + Q +GV + ++ L TG V+ Sbjct: 8 HTVKSFLAEFQAFCVLSLRAVVRIFRRPGYYREFVIQFDKMGVGSLFIICLTGLFTGMVM 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + ++++ ++E+G +L+++M+AGR GS+I AE+G+M + E++D Sbjct: 68 ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVD 127 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D V L++ R+ AL++++P+L ++ + A++G I+ YDI +++ Sbjct: 128 AMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLP 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ G++K I ++ G + + +G VV S +V++ D Sbjct: 187 QFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADF 246 Query: 363 LFAIFY 368 + Sbjct: 247 FMTKIF 252 >gi|118496937|ref|YP_897987.1| ABC-type transport system permease protein [Francisella tularensis subsp. novicida U112] gi|254372307|ref|ZP_04987798.1| hypothetical protein FTCG_01374 [Francisella tularensis subsp. novicida GA99-3549] gi|118422843|gb|ABK89233.1| ABC-type transport system permease protein [Francisella novicida U112] gi|151570036|gb|EDN35690.1| hypothetical protein FTCG_01374 [Francisella novicida GA99-3549] gi|328676409|gb|AEB27279.1| ABC-type transport system involved in resistance to organic solvents, permease component [Francisella cf. novicida Fx1] Length = 254 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 121/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|162451968|ref|YP_001614335.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161162550|emb|CAN93855.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 296 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 1/268 (0%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + + + + A +G + G+ A + +R Sbjct: 25 PPAPPVKRPRAPIAQEPSGVHQLGGSFLQIAATVGGMAVLAGKIAARVATLRVDGAEFMR 84 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 +Y +GV +P+V++ + TGA++ Q A + +FGA LREI LLTA+ Sbjct: 85 NLYRMGVKSMPIVVVTALFTGAIMVIQAAPLVERFGAHGLLGWGAGFGTLREIAPLLTAL 144 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 MI GR G+ AE+G+M + E+IDA+R + +D V LI+PR A++++L L I A+ A Sbjct: 145 MINGRVGANNTAELGTMVVTEQIDALRVLAIDPVSFLIAPRFLAMVLTLLLSVIFADALA 204 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHS-TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 ++GA++ + AVF++ S + ++ +GL+K+ + + + + G V Sbjct: 205 LLGAALTGDLLLGVAPAVFYNGLTSGLLDIGDVMSGLVKSVVFGVVLALSSCQYGLGVTG 264 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + +G+ V VV S + + I+D + Sbjct: 265 GAPGVGRAVNATVVASAAGIFILDYFVS 292 >gi|302523371|ref|ZP_07275713.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] gi|302432266|gb|EFL04082.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] Length = 253 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + T E + ++ I Q +++ + L+S GAVIA Sbjct: 1 MLGPLRQTGRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ +++IAG GSAI A++GS KI EE+DA+ Sbjct: 61 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAM 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G + + F + Sbjct: 121 EVMGVSPVQRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSAL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ G +KA GIVA G +G V VV + ++++++ Sbjct: 181 AQLPDLYVGELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAM 240 Query: 365 AIFYFAI 371 Y I Sbjct: 241 TAVYLQI 247 >gi|208780390|ref|ZP_03247731.1| toluene tolerance protein Ttg2B [Francisella novicida FTG] gi|208743758|gb|EDZ90061.1| toluene tolerance protein Ttg2B [Francisella novicida FTG] Length = 241 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 5 LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 64 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 65 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 124 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 125 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 184 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 185 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 239 >gi|254373781|ref|ZP_04989264.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548] gi|151571502|gb|EDN37156.1| hypothetical protein FTDG_01565 [Francisella novicida GA99-3548] Length = 254 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKALSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ T ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|116747850|ref|YP_844537.1| hypothetical protein Sfum_0402 [Syntrophobacter fumaroxidans MPOB] gi|116696914|gb|ABK16102.1| protein of unknown function DUF140 [Syntrophobacter fumaroxidans MPOB] Length = 258 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 115/248 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + G + GE + + + Q+ ++G + ++ + + TG V Sbjct: 11 GRRCVHAVRLAGRSLLFLGEALGYGFVPPLKIRRSLEQIVFIGAKSLIIIFVTALSTGMV 70 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A + L E L+++ +RE+G +L+A+++ GR+GSA+ AEIG M++ E+I Sbjct: 71 LALEALHMLRGGATENILGALVALSIVRELGPVLSALIVTGRAGSAMTAEIGIMRLTEQI 130 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ M ++ ++ +++P+I A ++S+P+L + I+G V Y +P FF Sbjct: 131 DALEMMAVNPIKHVVTPKIVAGVVSMPVLCAFFDVVGILGGYFVGVVIYGVPEVHFFGGM 190 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 ++ GL K+ A+ + G+ + + + T VV + V+++D Sbjct: 191 TKAVAYLDVAGGLFKSAVFGLAMSWICSMMGYGAAATAEGVSRATTNAVVITSIAVLVLD 250 Query: 362 SLFAIFYF 369 + Sbjct: 251 YMVTSLLL 258 >gi|307634769|gb|ADI83773.2| transporter membrane protein of unknown function DUF140 [Geobacter sulfurreducens KN400] Length = 256 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 118/246 (47%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + S + ++ + + Q +GV + ++ L TG V+ Sbjct: 8 HTVKSFLAEFQAFCVLSLRAVVRIFRRPSYYREFVIQFDKMGVGSLFIICLTGLFTGMVM 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + ++++ ++E+G +L+++M+AGR GS+I AE+G+M + E++D Sbjct: 68 ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVD 127 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D V L++ R+ AL++++P+L ++ + A++G I+ YDI +++ Sbjct: 128 AMRVEGTDIVSRLVTSRLKALMLAMPMLALVTDAVALLGGYIIAAG-YDINLLMYWKSLP 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ G++K I ++ G + + +G VV S +V++ D Sbjct: 187 QFMVFQDLIEGVMKPFVFGTLIALIGCYVGLSTSGGAEGVGTSAKRAVVLSSVMVLVADF 246 Query: 363 LFAIFY 368 + Sbjct: 247 FMTKIF 252 >gi|150025444|ref|YP_001296270.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86] gi|149771985|emb|CAL43461.1| Probable ABC-type transport system, permease component [Flavobacterium psychrophilum JIP02/86] Length = 248 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G E K+ + +++ + + + +V ISF G V+A Sbjct: 3 LLRYLSQIGRYFLMIVEIFKKPTKWSVMRTLIFKEIDDLIIGSLGIVAFISFFVGGVVAI 62 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A L+ + + E ++++AG+ GS I + IG+M++ E+IDA Sbjct: 63 QTALNLTNPLIPKYLIGFATRQSIILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDA 122 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ + L+ P++ AL++ P L +A F I+G I A F + Sbjct: 123 LEVMGVNSLNYLVFPKLIALLL-YPFLIGIAMFLGILGGYIASVYGGFGTHADFLNGLQK 181 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +I IK A + + G+ + + +GK T V + ++I+++ + Sbjct: 182 EFIPFHITYAFIKTLIFALILATIPSFHGYYMKGGALEVGKASTVSFVWTSVMIILMNYI 241 Query: 364 FAIFYF 369 Sbjct: 242 LTQLLL 247 >gi|318059765|ref|ZP_07978488.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actG] gi|318075809|ref|ZP_07983141.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actF] Length = 287 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 108/239 (45%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + T E + ++ I Q +++ + L+S GAVIA Q Q Sbjct: 43 GRLFALTLEVLRAIFRRPFQFREFIEQFWFIASVTILPAALVSIPFGAVIALQVGSLTQQ 102 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +++ L+ +++IAG GSAI A++GS KI EE+DA+ MG+ V Sbjct: 103 LGAQSFTGGASVLAVIQQASPLIVSLLIAGAGGSAICADLGSRKIREELDAMEVMGVSPV 162 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR+ A + LL L + +G + + F + A L +++ Sbjct: 163 QRLVVPRVLATMFVALLLNGLVSVVGTLGGYFLNVGLQHGTPGAYLQSFSALAQLPDLYV 222 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G +KA GIVA G +G V VV + ++++++ Y I Sbjct: 223 GELKALVFGLIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFILLLVVNMAMTAVYLQI 281 >gi|323527530|ref|YP_004229683.1| hypothetical protein BC1001_3209 [Burkholderia sp. CCGE1001] gi|323384532|gb|ADX56623.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1001] Length = 259 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 125/259 (48%), Gaps = 1/259 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 IG I G + + +Q+++VG + ++ Sbjct: 1 MIGSLISTLGRSVLDGLGTAGYATRFFFRLLFQFFPLLRRPRLVTKQIHFVGNYSLVIIA 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEI Sbjct: 61 VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G MK E++ A+ M +D V+++++PR+WA IIS+P+L + + + G +V + Sbjct: 121 GLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVAGGYVVGVLLIGV 180 Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ + ++ G++K+ A+ VA+ +G+ + + T VV Sbjct: 181 DAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRATTKTVV 240 Query: 352 QSISIVIIIDSLFAIFYFA 370 + V+ +D L F+ Sbjct: 241 YASLAVLGLDFLLTALMFS 259 >gi|319788633|ref|YP_004148108.1| hypothetical protein Psesu_3054 [Pseudoxanthomonas suwonensis 11-1] gi|317467145|gb|ADV28877.1| protein of unknown function DUF140 [Pseudoxanthomonas suwonensis 11-1] Length = 249 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG + +S + FL L R+ Y +G +P++ + G V+ Sbjct: 3 AVGAVRSLGRAGLFSLSVLRASLPSRDFLAELARETYKIGGRSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ FGA L+ + RE+G +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTFGAADALSTLLGLSLYRELGPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++ +PLLT AI + K + F++ + Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLCVPLLTGFFCSLAISASWFEAVKVLGLDNGTFWAALQGS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + L+K+ +VA GF T VV + +V++++ + Sbjct: 183 VDFWDDFGVALLKSAVFGGVSALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMLNFV 242 Query: 364 FAIFYFA 370 + F Sbjct: 243 MSALLFQ 249 >gi|294672817|ref|YP_003573433.1| hypothetical protein PRU_0026 [Prevotella ruminicola 23] gi|294473166|gb|ADE82555.1| putative membrane protein [Prevotella ruminicola 23] Length = 251 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + G + + + FL I +M +G++ + +V++ISF GAVI Q Sbjct: 10 LTTFGRYLMLMGRVFSRPERMRMFLKQYITEMTQLGINSIGIVLIISFFIGAVICIQMKL 69 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + L E + +++AG+ GS I +E+G+M++ ++IDA+ M Sbjct: 70 NIQSPWMPRWVAGYTTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDALEIM 129 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +P L I ++ + IIGA + + I + Sbjct: 130 GINSACYLILPKIIGLLTIMPFLVIFSSATGIIGAYGTAYIGHIIAPDDLTAGLQHAFIP 189 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ +IK+ F A I V G+ V S ++GK T VV S +++ D Sbjct: 190 WFVWMSIIKSQFFAFIISSVPAFCGYTVEGGSVNVGKASTDAVVTSSVLILFSDVFLTQL 249 Query: 368 YF 369 Sbjct: 250 LS 251 >gi|332041054|gb|EGI77422.1| hypothetical protein HGR_06456 [Hylemonella gracilis ATCC 19624] Length = 260 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 123/253 (48%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 S+ +G F + + Q++ +G + ++++ G Sbjct: 8 DVGYAVRSKLVDIGRATRLFIRFWQLARPTFRRFGLVSEQIHLLGNHSLAIIVVSGLFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG + L FG+E ++++ +RE+G ++ A++ AGR+G+++ AEIG +K E Sbjct: 68 FVLGLQGYYILVDFGSEQALGQMVTLSLVRELGPVVAALLFAGRAGTSLTAEIGLLKAGE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +++A+ M +D V+ +++PR WA +I+LPLLT + + ++G +V I F+ Sbjct: 128 QLNAMAMMAVDPVQRILAPRFWAGVIALPLLTAVFSAVGVLGGWVVGVVMIGIDPGAFWG 187 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ ++ ++ G+IK+ + A+ +G+ + + T VV + V+ Sbjct: 188 QMQASVSVWSDVGNGVIKSIVFGFTVSFTALLQGYEAQPTPEGVSRATTRTVVMASLAVL 247 Query: 359 IIDSLFAIFYFAI 371 +D + F I Sbjct: 248 GLDFVLTALMFTI 260 >gi|296532685|ref|ZP_06895378.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gi|296266987|gb|EFH12919.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 278 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 3/263 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG V + D + LG + T + + L+R + G+ P Sbjct: 18 FVAGIGAWAVAVLRDVRAATGFLGEAVVMTLSLLPRPRRLRV--GDLLRHLDEAGLRAFP 75 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +L+ + G ++A Q + + Q+GAEI+ L+ I LRE+G L+ A+++AGR+GSA Sbjct: 76 LTLLLGLLIGVILAFQSSIPMRQYGAEIYIPSLVGISLLRELGPLIAAIILAGRTGSAFA 135 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+M +NEE+DA+R MG+D + +L+ PR+ A ++ +P+LT+L N S +IG V+ Sbjct: 136 AELGTMTVNEEVDALRIMGIDPMVMLVLPRLIAAMLVMPVLTLLMNLSGLIGMGTVM-GA 194 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 P A+ ++ TL + GL K+ + + + G + G ++G T Sbjct: 195 LGFPAALVINQLSYWLTLGTLLGGLGKSVVFGLVVAGIGCRAGLSAGRGPRAVGDAATAA 254 Query: 350 VVQSISIVIIIDSLFAIFYFAIG 372 VV I +++D LFA+ ++ +G Sbjct: 255 VVGGIVSTVVLDGLFAVLFYRLG 277 >gi|184159620|ref|YP_001847959.1| ABC transporter [Acinetobacter baumannii ACICU] gi|294842631|ref|ZP_06787314.1| ABC-type transport system [Acinetobacter sp. 6014059] gi|183211214|gb|ACC58612.1| ABC-type transport system [Acinetobacter baumannii ACICU] gi|322509530|gb|ADX04984.1| ttg2B [Acinetobacter baumannii 1656-2] gi|323519550|gb|ADX93931.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715] Length = 258 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L +I + G + QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACEPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|317125893|ref|YP_004100005.1| hypothetical protein Intca_2777 [Intrasporangium calvum DSM 43043] gi|315589981|gb|ADU49278.1| protein of unknown function DUF140 [Intrasporangium calvum DSM 43043] Length = 282 Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 99/262 (37%), Gaps = 1/262 (0%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 L G+ + L + + + + +G Sbjct: 9 RPLARLAGRPGRGLESLGAQMRFYVRSLAWSGRTVRRYKKEVVRLLAEVSLGTGALSVIG 68 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V+ ++F TG + QG L Q G F+ + REI L+ + +A Sbjct: 69 -GTVGVIAFMAFFTGTEVGLQGYSALEQLGTGAFTGFFSAYFNTREIAPLVAGLALAATV 127 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G A++G+M+I+EE+DA+ MG+ + L++ R+ A +++ L ++ S+ Sbjct: 128 GCGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRMIAGFVAVVPLYVIGLLSSYAATRF 187 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + Y+ + FH +IF K A I ++ G+ +G Sbjct: 188 IATTYFGQSEGTYDHYFHLFLPPGDIFWSFGKVMVFAVVIILIHCYYGYTASGGPAGVGV 247 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V T V SI + ++D ++ Sbjct: 248 AVGTAVRTSIVAINVVDFFLSL 269 >gi|189502390|ref|YP_001958107.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus 5a2] gi|189497831|gb|ACE06378.1| hypothetical protein Aasi_1030 [Candidatus Amoebophilus asiaticus 5a2] Length = 229 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 1/229 (0%) Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF-SI 200 ++ +K + I + +G+ + +V ++S GAV Q ++ L A+ F Sbjct: 1 MFSNRVAWKTYFQQTIDECINIGICSITIVSIVSIFIGAVTCIQISYNLKSPFAQDFLVG 60 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 + + + E+ + A++ AG+ GS I +++GSM+I E+IDA+ MG++ L+ P+I Sbjct: 61 FGVRNMVILELAPTVMAIIFAGKVGSNIASQLGSMRITEQIDALEVMGINPTTYLVLPKI 120 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A I PLL IL+ AI + + + I + K+ Sbjct: 121 IASIFMYPLLVILSGSLAIYSGYLAAKFVLTMAAEDYIYGIRFMFEPYTIQFAIYKSIAF 180 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A + +A +GF V + ++G+ T V S ++ D + Sbjct: 181 AFLVSSIASYKGFYVFRGAVAVGQASTEAVTNSCIAILAADYVLTQLLL 229 >gi|157413886|ref|YP_001484752.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9215] gi|254526072|ref|ZP_05138124.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus str. MIT 9202] gi|157388461|gb|ABV51166.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9215] gi|221537496|gb|EEE39949.1| ABC-type transport system involved in resistance to organic solvents permease component [Prochlorococcus marinus str. MIT 9202] Length = 251 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 10/253 (3%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 F S I G I+ +K K L Q+ G + +V++ G Sbjct: 6 FFKRLLSSLVIGGQAINFI-------FKGKISKNDLFEQLMESGPGSLLIVLITGIAAGT 58 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 V Q A QL+ G L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+ Sbjct: 59 VFNIQVASQLTSMGVSSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQ 118 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 I+AI + + V+ L+ PR+ +++I P+ +L A+ I +Y +P VF++ Sbjct: 119 IEAITMLRTEPVQYLVVPRLLSMVIMSPIQCLLFLSVALWSGQIWSTIFYKVPPIVFWTS 178 Query: 301 FHS---TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S + T A++ + LIK+ I I+A G +G T VV ++ V Sbjct: 179 VRSGNVSLTSADLTSMLIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTV 238 Query: 358 IIIDSLFAIFYFA 370 ++D L F Sbjct: 239 SLMDVLLTQILFG 251 >gi|194324165|ref|ZP_03057939.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp. novicida FTE] gi|194321612|gb|EDX19096.1| toluene tolerance protein Ttg2B [Francisella tularensis subsp. novicida FTE] Length = 222 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 118/220 (53%) Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 + I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE Sbjct: 1 MNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRE 60 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 +G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L Sbjct: 61 LGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPIL 120 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 ++ AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ Sbjct: 121 ALIFASVAILAGFILAEAALGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALY 180 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G+ SN + K T VV V+ D + F Sbjct: 181 QGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220 >gi|269128542|ref|YP_003301912.1| hypothetical protein Tcur_4347 [Thermomonospora curvata DSM 43183] gi|268313500|gb|ACY99874.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 282 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 113/262 (43%), Gaps = 10/262 (3%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS------- 166 G+ + + I ++ G +S A + + + + + R + V + Sbjct: 8 GRALARVIGKPLNRVEDFGHQLSFYARAFAWTLRVLRRYRTEVARLLAEVSLGTGGLAVI 67 Query: 167 --GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V +V ++F TG+ + QG L+Q G ++ + S RE+ L++A+ ++ Sbjct: 68 GGSVAIVGFMTFFTGSQVGLQGYNSLNQIGTAAYTGFVSSYFNTRELAPLVSALALSATV 127 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G A++G+M+I++EIDA+ M + V L++ R+ A +I++ L ++ ++ + + Sbjct: 128 GCGFTAQLGAMRISDEIDALEVMAVPTVPFLVTTRLLAGMIAVIPLYVVGLLASYLATRL 187 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ +Y + F+ +I K A + ++ GF +G Sbjct: 188 IVTVFYGQSTGTYDHYFNLFLPPYDILWSFGKVIVFAILVMLIHCYYGFHASGGPAGVGV 247 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V SI ++ + D + Sbjct: 248 AVGRAVRTSIVVINLADLFLGM 269 >gi|302338250|ref|YP_003803456.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] gi|301635435|gb|ADK80862.1| protein of unknown function DUF140 [Spirochaeta smaragdinae DSM 11293] Length = 258 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 3/260 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G +++ I + I + F + + L+ Q+ + GV + Sbjct: 1 MFQELGHRVIASIRELFYACGFFLRTIKESVPFFR---RRQIGYRVLVMQLLFTGVEALG 57 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ LI+ + G VI G L QFG ++ + +RE+G LL A +I RSG+AI Sbjct: 58 VISLIALILGGVIIVYGVDLLPQFGQGELIYSILITVIMRELGPLLCAFIIIARSGTAIA 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G M ++ +I+A ++G+D + L+ PR +I S+ LL I N +I + V Sbjct: 118 TELGQMVVSHQIEAYTSVGVDPISYLVVPRFLGVIFSMILLNIYFNLFGLIASFFVTSFI 177 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 IP + + +I + +IK+ I + A GF V S + + V Sbjct: 178 QPIPMRDYMYDLITHIRSVDIVSSMIKSLIFGAIIALSATYNGFRVEQSSTEVPQVVIKA 237 Query: 350 VVQSISIVIIIDSLFAIFYF 369 VVQS ++I+ D+L + Y+ Sbjct: 238 VVQSFVLIIVADALITLIYY 257 >gi|307731184|ref|YP_003908408.1| hypothetical protein BC1003_3170 [Burkholderia sp. CCGE1003] gi|307585719|gb|ADN59117.1| protein of unknown function DUF140 [Burkholderia sp. CCGE1003] Length = 259 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 126/259 (48%), Gaps = 1/259 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 IG I G + + +Q+++VG + ++ Sbjct: 1 MIGSLISTVGRSVLEGLGTAGYATRFFFRLLFEFFALLRRPRLVTKQIHFVGNYSLVIIA 60 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEI Sbjct: 61 VSGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G MK E++ A+ M +D V+++++PR+WA IIS+P+L + + ++G +V + Sbjct: 121 GLMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVLGGYVVGVLLIGV 180 Query: 293 PFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F+S+ + ++ G++K+ A+ VA+ +G+ + + T VV Sbjct: 181 DAGAFWSQMQGGVDVWRDVGAGVVKSVVFGLAVTFVALFQGYEARPTPEGVSRATTKTVV 240 Query: 352 QSISIVIIIDSLFAIFYFA 370 + V+ +D L F+ Sbjct: 241 YASLAVLGLDFLLTALMFS 259 >gi|169632329|ref|YP_001706065.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii SDF] gi|239503256|ref|ZP_04662566.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii AB900] gi|260549862|ref|ZP_05824078.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624] gi|169151121|emb|CAO99787.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter baumannii] gi|193078493|gb|ABO13499.2| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC 17978] gi|260407112|gb|EEX00589.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624] Length = 258 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 9/263 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I A +L +I + G + QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSA--------GGFGRFVYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + G V+ QG L G+E ++S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ I+G +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+S + ++ G+IK+ A +A+ +G+A + +T Sbjct: 174 FLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACDPTPEGIATAMT 233 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 VV S V+ D + F Sbjct: 234 RTVVYSSLCVLGFDFVLTAVMFG 256 >gi|149921452|ref|ZP_01909904.1| ABC-type transport system involved in resistance to organic solvents [Plesiocystis pacifica SIR-1] gi|149817655|gb|EDM77122.1| ABC-type transport system involved in resistance to organic solvents [Plesiocystis pacifica SIR-1] Length = 259 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 104/250 (41%), Gaps = 2/250 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 I L + G + I Q G + ++ +++ G Sbjct: 7 GLIASVERSLTKLVDFVRFVGLALRVQFTRVPPRDVFITQFVDAGWGSLALLTMLTAFAG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 ++ Q +FG + + +RE+ ++ AV+ R G+ + A + +M+I+E Sbjct: 67 LNLSVQSYASFERFGGQDLLGMFAGVGGVRELYPVMAAVVCGARIGANLAASLANMRISE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +I+A+ M +D + LISPR+WA+ ++LPLL A+ I + D+ F + Sbjct: 127 QIEALEVMAVDPLDYLISPRLWAVTLALPLLCGYADVVGIAASYAGAVYQLDLDAGSFMT 186 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV--HSNSLGKKVTTCVVQSISIV 357 + L +I G++K M + ++A G++V ++ +G +V Sbjct: 187 QIQEQVGLVDIGAGMLKGLIMGWLVAVIACFHGYSVSKRDGADGVGISTNLAIVHGAVTC 246 Query: 358 IIIDSLFAIF 367 I+++ + Sbjct: 247 IVVNLFLSWL 256 >gi|328675485|gb|AEB28160.1| ABC-type transport system permease protein [Francisella cf. novicida 3523] Length = 222 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 117/217 (53%) Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 I Q+ VGV+ + +++ G V++ QG + LS+FGA ++++ LRE+G Sbjct: 4 RDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGAHSLLGVMVALSVLRELGP 63 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + ++S R WA +IS P+L ++ Sbjct: 64 VVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFILSTRFWACMISGPILALI 123 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 AI+ I+ I + F+S S+ T ++I G+IK+ A +A+ +G+ Sbjct: 124 FASVAILAGFILAEATLGISYGEFWSNIQSSVTASDISNGIIKSIVFAFITAWIALYQGY 183 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 SN + K T VV V+ D + F Sbjct: 184 YCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 220 >gi|56708629|ref|YP_170525.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110671100|ref|YP_667657.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134301425|ref|YP_001121393.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis WY96-3418] gi|224457822|ref|ZP_03666295.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254371262|ref|ZP_04987264.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254875493|ref|ZP_05248203.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|56605121|emb|CAG46242.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321433|emb|CAL09625.1| ABC transporter, membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|134049202|gb|ABO46273.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569502|gb|EDN35156.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis FSC033] gi|254841492|gb|EET19928.1| toluene ABC superfamily ATP binding cassette transporter [Francisella tularensis subsp. tularensis MA00-2987] gi|282159866|gb|ADA79257.1| ABC-type transporter involved in resistance to organic solvents, permease protein [Francisella tularensis subsp. tularensis NE061598] Length = 254 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 120/235 (51%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + K + I Q+ VGV+ + +++ G V++ QG + LS+FGA Sbjct: 18 LVKSLSLILRIVISKLNIRDCIIQIKAVGVNSIIIIVTSGVFIGLVLSLQGYYTLSKFGA 77 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++++ LRE+G ++TA++ AGR+ S+I +EIG MK ++I++++ M ++ + + Sbjct: 78 HSLLGVMVALSVLRELGPVVTAMLFAGRACSSITSEIGLMKATDQINSLKVMNVNPISFI 137 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 +S R WA +IS P+L ++ AI+ I+ I + F+S S+ ++I G+I Sbjct: 138 LSTRFWACMISGPILALIFASVAILAGFILAEAALGISYGEFWSNIQSSVIASDISNGII 197 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ A +A+ +G+ SN + K T VV V+ D + F Sbjct: 198 KSIVFAFITAWIALYQGYYCIPDSNGIAKATTKTVVYCCMSVLGADLILTSIMFG 252 >gi|296159550|ref|ZP_06842374.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] gi|295890258|gb|EFG70052.1| protein of unknown function DUF140 [Burkholderia sp. Ch1-1] Length = 255 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 123/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I G + + +Q+++VG + ++ + Sbjct: 2 ISAIGRSVLDGLGTAGYATRFFFRLLLEFFALLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 62 VGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M +D V+++I+PR+WA IIS+P+L + + + G +V + F Sbjct: 122 GEQLTAMEMMAVDPVKVVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLLIGVDAGAF 181 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + ++ G++K+ A+ VA+ +G+ + + T VV + Sbjct: 182 WSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTKTVVYASLA 241 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F+ Sbjct: 242 VLGLDFLLTALMFS 255 >gi|91785391|ref|YP_560597.1| ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689345|gb|ABE32545.1| Putatitive ABC transporter, inner membrane subunit, toluene tolerance Ttg2B-like protein [Burkholderia xenovorans LB400] Length = 255 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 123/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I G + + +Q+++VG + ++ + Sbjct: 2 ISAIGRSVLDGLGTAGYATRFFFRLLLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 62 VGFVLGLQGYYTLTRYGSEEALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M +D V+I+I+PR+WA IIS+P+L + + + G +V + F Sbjct: 122 GEQLTAMEMMAVDPVKIVIAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLLIGVDAGAF 181 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + ++ G++K+ A+ VA+ +G+ + + T VV + Sbjct: 182 WSQMQGGVDVWHDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTKTVVYASLA 241 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F+ Sbjct: 242 VLGLDFLLTALMFS 255 >gi|315635512|ref|ZP_07890778.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] gi|315480270|gb|EFU70937.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] Length = 285 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 12/266 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 W + I + + ++ +D + + D+ ++ F+ + K Sbjct: 18 LTLLNIWDKQTLPNIIKKIE--LLNFSKNSKLSIDFANLKGCDSSAIIYLISFLNTFEEK 75 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ 128 + + E++F ++ K+ ++ + FF +GKK +S Sbjct: 76 NITILNNKNHEKIFDFYKKHYQTKLLEEEKKNLFF--------EDLGKKSYDIYKESKEF 127 Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G V + K + ++++ + + +V + SF+ G VIA QG+ Sbjct: 128 IGFIGKVFYFFIYAIFNPSKIR--FKAMLKYIETSAFDALLIVAVTSFLVGVVIAYQGSV 185 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL +FGA IF ++++SI REI L+TA++IAGRS S+ AEIG+MKI EEIDA++TM Sbjct: 186 QLEKFGANIFIVEMISITMFREIAPLVTAIVIAGRSASSYTAEIGAMKITEEIDAMKTMN 245 Query: 249 LDFVRILISPRIWALIISLPLLTILA 274 + L PRI+AL ISLPLL Sbjct: 246 FEPTLFLTLPRIFALCISLPLLVFFC 271 >gi|121603597|ref|YP_980926.1| hypothetical protein Pnap_0686 [Polaromonas naphthalenivorans CJ2] gi|120592566|gb|ABM36005.1| protein of unknown function DUF140 [Polaromonas naphthalenivorans CJ2] Length = 260 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 116/251 (46%), Gaps = 1/251 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + S LG A+ + Q++++G + ++ + G Sbjct: 8 DVGFATRSWLANLGYGCRLFLRLLATFGSSFKRFGLVRDQIHFLGNYSLVIIAISGLFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V QG + L +FG+ L++ +RE+G ++TA++ AGR+G+++ AEIG MK E Sbjct: 68 FVFGLQGYYTLLRFGSTEALGQLVTFTLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +I + M +D ++ +++PR W +I++PLL + + +IG +V + F+S Sbjct: 128 QISVMEMMAVDPIQRILAPRFWGGVITMPLLAAVFSAMGVIGGWVVGVLMLGVDSGSFWS 187 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + + ++ G++K+ + +A+ +GF + T VV + V+ Sbjct: 188 QIQGSVDVWRDVGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTVVVASLAVL 247 Query: 359 IIDSLFAIFYF 369 +D + F Sbjct: 248 ALDFILTAMMF 258 >gi|121593173|ref|YP_985069.1| hypothetical protein Ajs_0749 [Acidovorax sp. JS42] gi|222109932|ref|YP_002552196.1| hypothetical protein Dtpsy_0717 [Acidovorax ebreus TPSY] gi|120605253|gb|ABM40993.1| protein of unknown function DUF140 [Acidovorax sp. JS42] gi|221729376|gb|ACM32196.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 260 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 128/261 (49%), Gaps = 8/261 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 H+G + + D A + ++ G+ + Q++++G + ++ Sbjct: 7 THVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLVR-------DQVHFLGNYSLSII 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + G V+A QG L +G+ ++++ +RE+G ++TA++ AGR+G+++ AE Sbjct: 60 AMSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPVVTALLFAGRAGTSLTAE 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG M+ E++ A+ M +D VR +++PR W +I++PLL ++ N +IG +V Sbjct: 120 IGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLALVFNAVGVIGGWLVGVVLIG 179 Query: 292 IPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+ + S + ++ G++K+ A+ +A+ +GF + + T V Sbjct: 180 VDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAVLQGFVAKPTPEGVSRATTRTV 239 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 V + V+ +D + F+I Sbjct: 240 VMASLSVLGLDFVLTALMFSI 260 >gi|326775351|ref|ZP_08234616.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] gi|326655684|gb|EGE40530.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] Length = 290 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 38 LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ ++ A++I+G +GSAI A++GS KI EE+DA+ Sbjct: 98 QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277 Query: 365 AIFYFAI 371 Y I Sbjct: 278 TAIYLQI 284 >gi|182434833|ref|YP_001822552.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463349|dbj|BAG17869.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 290 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 38 LLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 97 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ ++ A++I+G +GSAI A++GS KI EE+DA+ Sbjct: 98 QVGSLTQQLGAQSFTGGASVLAVIQQASPIIVALLISGAAGSAICADLGSRKIREELDAM 157 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 158 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 217 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 218 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 277 Query: 365 AIFYFAI 371 Y I Sbjct: 278 TAIYLQI 284 >gi|124515845|gb|EAY57354.1| probable ABC transporter, permease [Leptospirillum rubarum] Length = 251 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 111/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + + QM +GV +P+V L S G +A Sbjct: 1 MLDLFQSMGDFTLMVSKSFRYMVT-HFRTGDTLIQMDRIGVGSIPIVFLASIFAGLDMAL 59 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q ++ +GA +++ +R++G +L +++++ R + I +E+G M ++IDA+ Sbjct: 60 QFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDAL 119 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG+D + L++PRI+A I+ +P+L+I +F A++ + +P +F+S Sbjct: 120 RVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRDA 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T N+ +K F + + G + +GK T VV + +++ + L Sbjct: 180 LTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFLL 239 Query: 365 AIFYFAI 371 + + Sbjct: 240 SKLLINV 246 >gi|312141010|ref|YP_004008346.1| integral membrane protein yrbe4a [Rhodococcus equi 103S] gi|325675353|ref|ZP_08155037.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311890349|emb|CBH49667.1| putative integral membrane protein YrbE4A [Rhodococcus equi 103S] gi|325553324|gb|EGD23002.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 264 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 116/258 (44%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G + G ++ + +++K I Q +++ + L Sbjct: 1 MGGTRASLMKPVNGALTQAGNIVQLFVDVVRNTFKRPFQFKEFIEQAWFIASVTILPTAL 60 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ GAV++ Q + Q GAE F+ + +++ ++TA++IAG +GSA+ A++G Sbjct: 61 VAIPFGAVVSLQTGSLIKQLGAESFTGAASVLAVIQQGSPIVTALLIAGAAGSAVTADLG 120 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 S I EEIDA+ +G++ V+ L+ PR+ A+++ LL L + I G Sbjct: 121 SRTIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVSVVGIAGGYFFNVILQGGT 180 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + + F + A L +++ +KA G++A +G +G+ V VV + Sbjct: 181 PGAYLASFSALAQLPDLYIAEVKAAIFGVIAGVIAAYKGLTPKGGPKGVGEAVNQAVVIT 240 Query: 354 ISIVIIIDSLFAIFYFAI 371 ++ + + + Y I Sbjct: 241 FLVLFFANLILTMVYLQI 258 >gi|303256524|ref|ZP_07342538.1| toluene tolerance ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331000622|ref|ZP_08324280.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis YIT 11859] gi|302860015|gb|EFL83092.1| toluene tolerance ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329571184|gb|EGG52889.1| toluene tolerance protein Ttg2B [Parasutterella excrementihominis YIT 11859] Length = 263 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 8/268 (2%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 N +G + + + + L ++ N G ++Q+Y+VG Sbjct: 3 GIFNWISSVGAWALSGVRTLGNFSRFLFRLVVNLGPSFTR-------FQDTLKQLYFVGN 55 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G V+ QG + LS +G+E L+++ LRE+G ++TA++ AGR+G Sbjct: 56 YSLVIILVSGLFVGFVLGLQGDYVLSSYGSEQALGVLVALSLLRELGPVVTALLFAGRAG 115 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 +++ AEIG M E++ A+ MG+D +R ++ PR A +IS+PLL I+ + IIG+ +V Sbjct: 116 TSLTAEIGLMNAGEQLSALEMMGVDPIRRILGPRFLACVISMPLLAIMFSAVGIIGSWVV 175 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + F+++ + + +I G+IK A+G +A+ EG+ + Sbjct: 176 AVPLIGLDSGAFWAQMQAGVEVGPDIGNGIIKTFVFGVAVGAIALYEGYTARATPEGVSS 235 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAIG 372 T VV S +V+ +D + F F G Sbjct: 236 ATTRTVVVSSLVVLGLDFILTAFMFTHG 263 >gi|254392558|ref|ZP_05007736.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197706223|gb|EDY52035.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 255 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 109/246 (44%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + H G + T E S ++ L I Q ++V + L+S GAVIA Q Sbjct: 4 LASLHETGRFFALTAEIVRSVFRRPFQLREFIEQFWFVASVTILPAALVSIPFGAVIALQ 63 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 64 VGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAME 123 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 MG+ ++ L+ PR+ A ++ LL + + +G D + + F + A Sbjct: 124 VMGVSPIQRLVVPRVLATMLVAFLLNGMISVVGTLGGYFFNVIMQDGTPGAYLASFSALA 183 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L +++ KA G+VA G +G V VV + ++ ++ + Sbjct: 184 QLPDLYISEFKALVFGFIAGVVAAHRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMIIT 243 Query: 366 IFYFAI 371 Y + Sbjct: 244 AIYLQV 249 >gi|330444642|ref|YP_004377628.1| ABC transporter permease [Chlamydophila pecorum E58] gi|328807752|gb|AEB41925.1| ABC transporter, permease protein [Chlamydophila pecorum E58] Length = 271 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 113/249 (45%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 F L + S K ++ Q Y +GVS +PVVIL +TG Sbjct: 19 NFCRALFLFPIGLSRWLGFNFAVVKSFSFKKCLFHAVCVQGYAIGVSSLPVVILTGVITG 78 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A Q +QL +G + L EIG +LTA+ ++GR G AI A +G++++ E Sbjct: 79 VVLALQSYYQLGVYGLSCAIGFFVVKSILVEIGPVLTALALSGRVGGAIAAFLGTLRMTE 138 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +I A+ ++G++ + PRI A II++P L I+A +S I ++ + IP ++ Sbjct: 139 QISAMSSLGVNPLEYFALPRIIAGIITMPALVIIAVWSGIFSGYMICRYAFQIPSQEYWY 198 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 ++F ++K+ I +A +G + + T VV S +I Sbjct: 199 MVAGHILPFDVFMVIVKSLIFGFFITSLACYQGLGRYRRITGVTEVTTEGVVISYVSIIF 258 Query: 360 IDSLFAIFY 368 I+ + + Sbjct: 259 INCVITTIF 267 >gi|89901707|ref|YP_524178.1| hypothetical protein Rfer_2936 [Rhodoferax ferrireducens T118] gi|89346444|gb|ABD70647.1| protein of unknown function DUF140 [Rhodoferax ferrireducens T118] Length = 260 Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + Q LGL + + Q++++G + ++ + G Sbjct: 8 DIGFAARGQLANLGLGARLFIRLLTTLGPSFKRFGLIRDQIHFLGNYSLAIIAVSGLFVG 67 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V QG + L ++G+ L+++ +RE+G ++TA++ AGR+G+++ AEIG MK E Sbjct: 68 FVFGLQGYYTLQRYGSSSALGLLVTLTLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGE 127 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 +I + M +D V+ +++PR WA +I++PLL + + IIG +V + F+S Sbjct: 128 QISVMEMMAVDPVQRILAPRFWAGVITMPLLAAVFSAMGIIGGWVVGVLMIGVDGGSFWS 187 Query: 300 RFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + + ++ G++K+ + +A+ +GF + T VV + V+ Sbjct: 188 QIQEGVDVWQDLGNGIVKSIVFGFTVTFIALLQGFEAQPTPEGVASATTRTVVVASLAVL 247 Query: 359 IIDSLFAIFYFAI 371 +D + F + Sbjct: 248 GLDFILTAMMFTV 260 >gi|206602089|gb|EDZ38571.1| Probable ABC transporter, permease [Leptospirillum sp. Group II '5-way CG'] Length = 251 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 111/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + + QM +GV +P+V L S G +A Sbjct: 1 MLDLFQSMGDFALMVSKSFRYMVT-HFRTGDTLIQMDRIGVGSIPIVFLASIFAGLDMAL 59 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q ++ +GA +++ +R++G +L +++++ R + I +E+G M ++IDA+ Sbjct: 60 QFEVVMAPYGARALLGKVVTTSIIRDMGPVLASLVMSARVTAGISSELGMMNSTQQIDAL 119 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG+D + L++PRI+A I+ +P+L+I +F A++ + +P +F+S Sbjct: 120 RVMGVDPLDRLVAPRIFAGIVMMPILSISGDFLALLAGLGISMAVGHVPAPLFWSGVRDA 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T N+ +K F + + G + +GK T VV + +++ + L Sbjct: 180 LTAQNLTDAFLKPLFFGFILTSIGCYYGMKSASGAFGVGKSTTKAVVSAAIWILVANFLL 239 Query: 365 AIFYFAI 371 + + Sbjct: 240 SKLLINV 246 >gi|311744833|ref|ZP_07718629.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311311950|gb|EFQ81871.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 292 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 104/280 (37%), Gaps = 1/280 (0%) Query: 87 FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 + QK R +G + ++ V + Sbjct: 1 MATDTQQDPQKDARPSLVQRASAAPVKLGNGLDDLGKQMLFYLRVIKSVPRTIKNYSREI 60 Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 ++ + + VG V V+ + F TG + QG L Q G S + + Sbjct: 61 FRLLAEVTFGSGSLALVG-GTVGVIAAMCFFTGTEVGLQGYAALDQLGTSALSGFVSAYF 119 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 REI ++ + +A G A++G+M+I+EE+DA+ M + + L++ R+ A +I+ Sbjct: 120 NTREIAPIVAGIALAATVGCGFTAQLGAMRISEEVDALEVMAIPSLPFLVTTRVIAGLIA 179 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 + L I+ S+ + + + Y + F + ++ K A + + Sbjct: 180 VIPLYIVGLLSSYFATRLTVTQVYGQSSGTYDHYFTTFLPPGDVLWSFAKVLIFAVVVIL 239 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + G+ +G V V SI + ++D L ++ Sbjct: 240 IHCYYGYYASGGPAGVGVAVGLAVRTSIVAINVVDLLASM 279 >gi|28199532|ref|NP_779846.1| toluene tolerance protein [Xylella fastidiosa Temecula1] gi|71274637|ref|ZP_00650925.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71899306|ref|ZP_00681467.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71899651|ref|ZP_00681805.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|170730903|ref|YP_001776336.1| toluene tolerance protein [Xylella fastidiosa M12] gi|182682267|ref|YP_001830427.1| hypothetical protein XfasM23_1749 [Xylella fastidiosa M23] gi|28057647|gb|AAO29495.1| toluene tolerance protein [Xylella fastidiosa Temecula1] gi|71164369|gb|EAO14083.1| Protein of unknown function DUF140 [Xylella fastidiosa Dixon] gi|71730603|gb|EAO32680.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|71730932|gb|EAO33002.1| Protein of unknown function DUF140 [Xylella fastidiosa Ann-1] gi|167965696|gb|ACA12706.1| toluene tolerance protein [Xylella fastidiosa M12] gi|182632377|gb|ACB93153.1| protein of unknown function DUF140 [Xylella fastidiosa M23] gi|307578543|gb|ADN62512.1| hypothetical protein XFLM_02565 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 249 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S LG SS + F LIR++Y +G +P++ + G V+ Sbjct: 3 LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS++ AE+ M+ ++I A+ Sbjct: 63 QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA ++++PLLT + AI I +F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAVLTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182 Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSALLF 248 >gi|187925542|ref|YP_001897184.1| hypothetical protein Bphyt_3570 [Burkholderia phytofirmans PsJN] gi|187716736|gb|ACD17960.1| protein of unknown function DUF140 [Burkholderia phytofirmans PsJN] Length = 255 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 123/254 (48%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I G + + +Q+++VG + ++ + Sbjct: 2 ISAIGRSVIGGLGTAGYATRFFFRLLLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 62 VGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M +D V+++++PR+WA IIS+P+L + + + G +V + F Sbjct: 122 GEQLTAMEMMAVDPVKVVVAPRLWAGIISMPILAAIFSAVGVFGGYVVGVLLIGVDAGAF 181 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + ++ G+IK+ A+ VA+ +G+ + + T VV + Sbjct: 182 WSQMQGGVDVWRDVGAGVIKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTKTVVYASLA 241 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F+ Sbjct: 242 VLGLDFLLTALMFS 255 >gi|78188458|ref|YP_378796.1| putative ABC transport system permease protein [Chlorobium chlorochromatii CaD3] gi|78170657|gb|ABB27753.1| putative ABC transport system permease protein [Chlorobium chlorochromatii CaD3] Length = 264 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 118/251 (47%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I K + + + + K + + Q G +P+V++ S Sbjct: 9 SINKLSAQAKEFFFTMQEFFLFSLRAFMAIPKMGRYWRDVFDQATICGTDSIPIVLVSSI 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GA++A + L FGA+ ++ +RE+G LL +M++ R GS AE+G+M+ Sbjct: 69 SIGALLAVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARFGSRNGAELGAMQ 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+E+IDA+R G D V L+ PR+ A ++ LT L++F+ + A+ + Y+ I + Sbjct: 129 ISEQIDALRAFGTDPVAKLVMPRLVAALVMFLPLTALSDFAGLQSAAYMAEHYHHIDAGI 188 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F++ + L + G +KAP A I +V+ GF + +G+ +V S + Sbjct: 189 FWNAVYPRLVLKDFVLGFLKAPVFAVIITLVSSFNGFNARGGTAGVGRATIKGIVVSSGL 248 Query: 357 VIIIDSLFAIF 367 V+I + + Sbjct: 249 VLIANFYVSKL 259 >gi|29832443|ref|NP_827077.1| ABC transporter integral membrane protein [Streptomyces avermitilis MA-4680] gi|29609562|dbj|BAC73612.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 267 Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 7/261 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVV 171 ++ + + SQ G ++ TG K L L + G V V+ Sbjct: 2 ALLNRLEELGSQLSFYGRSLAWTGRTVRRYK--KEILRLLAEVSFGRGALAVVGGTVGVI 59 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +SF TG + QG L+Q G F L + REI L+ + ++ G+ A+ Sbjct: 60 AFLSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQ 119 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ A + YY Sbjct: 120 LGAMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVVGLLSSYFAARTITTGYYG 179 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + F ++ K A I +V G+ +G V V Sbjct: 180 QSAGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYYASGGPAGVGVAVGRAVR 239 Query: 352 QSISIVIIIDSLFAIFYFAIG 372 SI + ++D ++ + G Sbjct: 240 TSIVAINVLDFFLSLAIWGAG 260 >gi|121609355|ref|YP_997162.1| hypothetical protein Veis_2398 [Verminephrobacter eiseniae EF01-2] gi|121553995|gb|ABM58144.1| protein of unknown function DUF140 [Verminephrobacter eiseniae EF01-2] Length = 260 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 130/264 (49%), Gaps = 8/264 (3%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + +G + + D A +L ++ G C + Q++++G Sbjct: 3 RQPIADLGFAVRSKLADIGMAARLLARLLLLAGAVCRRPALVR-------DQLHFLGNYS 55 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + ++++ G V+ QG + L ++GA L+++ +RE+G ++TA++ AGR+G++ Sbjct: 56 LAIIVVSGLFVGFVLGLQGYYTLQRYGASEALGLLVALSLVRELGPVVTALLFAGRAGTS 115 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + AEIG M+ E++ A+ M +D VR +++PR WA +I++PLL + + +IG ++V Sbjct: 116 LTAEIGLMRSGEQLSAMEMMAIDPVRRILAPRFWAGVIAMPLLAAMFSAVGVIGGAVVGV 175 Query: 288 KYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 I F+S+ + ++ G++K+ + VA+ +G+ + + Sbjct: 176 LMIGIDPGAFWSQMQGGVDIWRDLGNGVLKSLVFGFTVSFVALLQGYVARPTPEGVARAT 235 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F+ Sbjct: 236 TRTVVLASLAVLALDFILTALMFS 259 >gi|282866015|ref|ZP_06275063.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] gi|282559054|gb|EFB64608.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] Length = 283 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 106/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + +K + Q ++V + L+S GAVIA Sbjct: 31 LLAPLRQTGQLFALALAVARAVFKRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 90 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG +GSAI A++GS KI EE+DA+ Sbjct: 91 QVGSLTEQLGAQSFTGGASVLAVIQQASPLIVALLIAGAAGSAICADLGSRKIREELDAM 150 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G + + F + Sbjct: 151 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVIMQGGTPGAYLASFSAL 210 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ G +KA GIVA G +G V VV + ++ ++ Sbjct: 211 AQLPDLYIGELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFAVNMAL 270 Query: 365 AIFYFAI 371 Y I Sbjct: 271 TAIYLQI 277 >gi|15837022|ref|NP_297710.1| toluene tolerance protein [Xylella fastidiosa 9a5c] gi|9105260|gb|AAF83230.1|AE003893_7 toluene tolerance protein [Xylella fastidiosa 9a5c] Length = 249 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S LG SS + F LIR++Y +G +P++ + G V+ Sbjct: 3 LVSSISSLGRSGLFALTVLRSSLPTRDFFAELIREIYKIGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS++ AE+ M+ ++I A+ Sbjct: 63 QGYRTLTLYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSVAAELSLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D + ++PR WA I+++PLLT + AI I +F+S ++ Sbjct: 123 ELMAIDPIAKAVAPRFWAAILTVPLLTGVFCSLAICSGYFQAVHVLGIDNGLFWSGLSNS 182 Query: 305 ATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFLEDFGVAMLKSAIFGGTSALVAAYVGFHAQPTIEGTSIATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 LSALLF 248 >gi|238918531|ref|YP_002932045.1| hypothetical protein NT01EI_0581 [Edwardsiella ictaluri 93-146] gi|238868099|gb|ACR67810.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 235 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 1/234 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + L RQ+Y VGV + ++I+ G V+ QG L+ + AE Sbjct: 1 MLFSALVGRPEPGKQWPLLRRQLYSVGVQSLLIIIVSGLFIGMVLGLQGYLVLTTYSAEA 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +++ Sbjct: 61 SLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVVA 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIK 316 PR WA +IS+PLLT++ I G S+V + I F+S ++ LIK Sbjct: 121 PRFWAGVISMPLLTVIFVAVGIWGGSVVGVDWKGIDAGFFWSAMQGAVDYRTDLLNCLIK 180 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + A + +A+ G+ S + + T VV + V+ +D + F Sbjct: 181 SLIFAITVMWIALFNGYDAVPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 234 >gi|225010488|ref|ZP_03700959.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-3C] gi|225005317|gb|EEG43268.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-3C] Length = 245 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 2/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G E ++K +++++ + + +VI +SF G V+ Q A Sbjct: 4 LAAIGQYFLMIREVFKKPTRWKVMRGLILKEIDELIYGSMGIVIFVSFFIGGVVTIQTAL 63 Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L+ + + E T++++AG+ GS I + IGSM++ E+IDA+ M Sbjct: 64 NLNSPLIPKNLIGFAARQSVILEFAPTFTSIIMAGKVGSFITSSIGSMRVTEQIDALEVM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ + L+ P+I AL + P + +A + I G + A F Sbjct: 124 GINSLNYLVFPKIIAL-LMYPFVIAIAMYLGIFGGFLAGVFGGFSTAADFIEGVRIDFVP 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ IK F A I V G+ + + +GK TT V + ++I + + Sbjct: 183 FHVAYAFIKTMFFAFIIATVPSFHGYYMKGGALEVGKASTTSFVWTAVVIITTNYILTQL 242 Query: 368 YFA 370 Sbjct: 243 LLG 245 >gi|84494808|ref|ZP_00993927.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] gi|84384301|gb|EAQ00181.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] Length = 276 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 9/232 (3%) Query: 144 ASSYKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFG 194 S + + ++R + V + V V+ ++F TG+ + QG L+Q G Sbjct: 32 WSPRTIRRYKKEILRLLAEVSLGSGALSVIAGTVGVLTFMAFFTGSQVGLQGYSSLNQLG 91 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 F+ L + L REI L+ + +A G A++G+M+I+EE+DA+ MG+ + Sbjct: 92 TGAFAGFLAAYLNTREIAPLVAGLSLAATVGCGFTAQLGAMRISEEVDALEVMGIPSLPF 151 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L++ R+ A I++ L ++ S+ ++ Y+ + FH +IF Sbjct: 152 LVTTRMIAGFIAVIPLYVIGLLSSYAATRFIVTDYFGQSKGTYDHYFHLFLPPIDIFYSF 211 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +K A I ++ G+ +G V V SI V ++D F++ Sbjct: 212 LKVLVFAVIIILIHCYYGYTASGGPAGVGVAVGKAVRTSIVAVNLVDFFFSL 263 >gi|307544520|ref|YP_003896999.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216544|emb|CBV41814.1| probable ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 260 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 2/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 ++I + C+ LG + +G +RQM++VGV + +V++ Sbjct: 3 ERIARLGRWGCNTLESLGDAGIFLVQSMFGKPSAEGM-RLWLRQMHFVGVMSLAIVLVSG 61 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+A QG L FGAE ++++ LRE+ ++ A++ AGR+GSA+ AEIG M Sbjct: 62 LFIGMVLALQGYTILVDFGAEDALGQMVALSLLRELAPVVAALLFAGRAGSALTAEIGLM 121 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ ++ +G+D +R +++PR+WA ++LPLLTI + G +V ++ + Sbjct: 122 KATEQLTSMEMIGVDPLRRVVAPRLWAGFVALPLLTIGFGVVGVWGGQLVGVQWLGVFEG 181 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ ++ A++ GLIK+ A + +A+ +G+A+ S + + T VV + Sbjct: 182 SYWGNMQASVDFIADVGNGLIKSLVFALVVTWIAVYQGYALVPTSEGISRATTRTVVYAS 241 Query: 355 SIVIIIDSLFAIFYFA 370 V+ +D + F Sbjct: 242 LAVLGLDFILTAVMFG 257 >gi|319778667|ref|YP_004129580.1| Uncharacterized ABC transporter, permease component YrbE [Taylorella equigenitalis MCE9] gi|317108691|gb|ADU91437.1| Uncharacterized ABC transporter, permease component YrbE [Taylorella equigenitalis MCE9] Length = 258 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I + S +G + +I Q++++G + ++ + Sbjct: 3 KFISRIGELIISAICAVGAFARLMWSVFLNVAFIFKRPSLVIEQLHFIGNHSLIIIAVSG 62 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G V+ QG LS +G+E ++S+ RE+G ++TA++ AGR+G+A AEIG M Sbjct: 63 LFVGFVLGLQGYHTLSMYGSEESLGLVVSLALTRELGPVVTALLFAGRAGTATTAEIGLM 122 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 K E++ A+ MG++ +R ++ PR W I++P+L + + ++G +V D+ Sbjct: 123 KSGEQLAAMDVMGINPIRRILVPRFWGGTIAMPILATIFSAIGVVGGWVVGVVLIDVDSG 182 Query: 296 VFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 F+S+ S + +I G IK+ A+ ++A+ EG+ + K T VV+S Sbjct: 183 SFWSQMQSGTDIVEDILNGFIKSVVFGVAVMLIALFEGWYSVPTPEGVAKATTHTVVKSS 242 Query: 355 SIVIIIDSLFAIFYF 369 V+ +D L F Sbjct: 243 LCVLGLDFLLTAVMF 257 >gi|209516602|ref|ZP_03265456.1| protein of unknown function DUF140 [Burkholderia sp. H160] gi|209503043|gb|EEA03045.1| protein of unknown function DUF140 [Burkholderia sp. H160] Length = 255 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 125/254 (49%), Gaps = 1/254 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I S G + + +Q+++VG + ++ + Sbjct: 2 ISAIGRAVMSGLGTAGYATRFFLRLLLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLF 61 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L+++G+E L+++ +RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 62 VGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKA 121 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M +D V+++I+PR+WA I+S+P+L + + ++G +V + F Sbjct: 122 GEQLTAMEMMAVDPVKVVIAPRLWAGIVSMPILAAIFSAVGVLGGYVVGVLLIGVDAGAF 181 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S+ + ++ G++K+ A+ VA+ +G+ + + T VV + Sbjct: 182 WSQMQGGVDVWKDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTRTVVYASLA 241 Query: 357 VIIIDSLFAIFYFA 370 V+ +D L F+ Sbjct: 242 VLGLDFLLTALMFS 255 >gi|282895910|ref|ZP_06303950.1| Putative uncharacterized protein [Raphidiopsis brookii D9] gi|281199155|gb|EFA74024.1| Putative uncharacterized protein [Raphidiopsis brookii D9] Length = 238 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 1/229 (0%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 + K + + Q+ VG + + +L + GAV Q A + FGA +++ Sbjct: 4 HLIRGKIHRRNTVEQLAVVGPDSLFIALLTAIFVGAVFTIQVAREFINFGAGNLVGGVLA 63 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 + RE+ +LTAV++AGR GSA AEIG+M++ E+IDA+ + D + + L Sbjct: 64 VALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDALLMLKTDPIDFFSHTSSFGLF 123 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 I+ + +G I+ Y++ VF + L +I + +IKA I Sbjct: 124 INATNFDLAIPGYWNVGRLIIATNLYNLSDTVFLDSARNFLDLRDIISAMIKAACFGILI 183 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA-IFYFAIG 372 I+ G + +G+ TT VV ++ ++ I + + + + G Sbjct: 184 AIIGCSWGLTTTGGAKGVGQSTTTAVVTALLVIFISNFFLSWLMFQGAG 232 >gi|284034024|ref|YP_003383955.1| hypothetical protein Kfla_6153 [Kribbella flavida DSM 17836] gi|283813317|gb|ADB35156.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836] Length = 257 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 112/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + +S + L ++Q ++V + L++ GAVIA Q + Q Sbjct: 13 GSLFAFALDTARASVRRPFQLREFLQQAWFVASVTIIPTALVAIPFGAVIALQVGGLIQQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA+ F+ + +RE + TA++IAG GSAI A++GS KI EE+DA+ +G+D + Sbjct: 73 FGAQAFTGSAAVLAVVREASPIATALLIAGAGGSAICADLGSRKIREELDAMMVLGIDPI 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ A ++ L + ++G + D + + F + A L +++ Sbjct: 133 HRLVVPRVLATMLVAFFLNGFVSVVGVMGGYVFNVVLQDGTPGAYIASFTALAHLPDLWQ 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G KA +VA +G G +G V VV + ++ + + YF + Sbjct: 193 GQAKALVFGFIAAVVASYKGVNAGGGPKGVGDAVNQSVVITFMLLFVANFSMTAIYFQL 251 >gi|54027083|ref|YP_121325.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018591|dbj|BAD59961.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 264 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 109/239 (45%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G V + + ++ I Q +++ + L++ GAV+A Q + Q Sbjct: 20 GNVFALFVDVLRKMFRRPFQWREFIEQSWFIASVSILPSALVAIPFGAVVALQTGSLIKQ 79 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GAE ++ + +++ ++TA++IAG +GSA+ A++GS I EEIDA+ +G+D + Sbjct: 80 LGAESYTGATSVLATVQQAAPVVTALIIAGAAGSAVAADLGSRTIREEIDAMEVLGVDPI 139 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR+ + + LL L + I G + S F + A L +++ Sbjct: 140 ARLVVPRVLGMTLVAVLLNGLVSVVGIAGGYFFNVLLQGGTPGAYLSSFSALAQLPDLWI 199 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G IKA G++A +G +G V VV + ++ ++ + + Y + Sbjct: 200 GEIKAAIFGLLAGVIAAYKGLHPKGGPKGVGDAVNQSVVITFLVLFFVNLILTLVYLQV 258 >gi|296089608|emb|CBI39427.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 23/236 (9%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 V G+ K ++ ++Q+ VG V V IL + G Q + ++ G Sbjct: 107 VFIMAGQVIIRILTGKVHWVNTLQQLERVGPRSVGVCILTAAFVGMAFTIQFVREFTRLG 166 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++E+ D +R +G + V Sbjct: 167 LNRSVGGVLALAFSRELSP-----------------------VSEQTDTLRVLGTNPVDY 203 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L++PR+ A I+LP LT+L + ++++ Y I + +I + + Sbjct: 204 LVTPRVIASCIALPFLTLLCFTVGMASSALLADSVYGISINIILDSAQRALNSWDIISAM 263 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 IK+ I V+ G + +G+ T+ VV S+ + I D + +F Sbjct: 264 IKSVAFGGIISTVSCAWGVTTMGGAKGVGESTTSAVVISLVGIFIADFALSYCFFQ 319 >gi|332043098|gb|EGI79296.1| protein of unknown function DUF140 [Lacinutrix algicola 5H-3-7-4] Length = 245 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 H +G E K+ +++ + + + + +V I+F G VI Q Sbjct: 1 MQYLHNIGSYFLMIVEMFRKPTKWSVMKQLILKDIDDLIIGSLGIVAFIAFFVGGVITIQ 60 Query: 186 GAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A + + + E ++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNIDNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+ A+++ P + +A F I G F + Sbjct: 121 EVMGINSINYLVFPKFVAMML-YPFVISIAMFLGIFGGLTACVLGGYSSVEDFITGVQID 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK A + + G+ + + +G+ TT V + +I+++ L Sbjct: 180 LIPFHVAYAFIKTIIFAFILATIPSYHGYFMKGGALEVGEASTTSFVWTSVAIILLNYLL 239 Query: 365 AIFYFA 370 + Sbjct: 240 TQMLLS 245 >gi|134103293|ref|YP_001108954.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|291004488|ref|ZP_06562461.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133915916|emb|CAM06029.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 263 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 109/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + + + + K + ++Q +++ + L++ GAVIA Q Sbjct: 13 GGIRETGRLFALMLDVGRALPKRPFQVREFVQQCWFIASVTILPTALVAIPFGAVIALQL 72 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 Q GA+ F+ + +++ ++TA++IAG GSAI A++GS KI +EIDA+ Sbjct: 73 GSLTRQIGAQSFTGGASVLAIIQQASPIVTALLIAGAGGSAICADLGSRKIRDEIDAMEV 132 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V L+ PR+ A ++ LL + + ++G + + F++ A Sbjct: 133 LGVSPVHRLVVPRVLAAMLVAVLLNGMVSVVGVMGGYFFNVIMQGGTPGAYMASFNALAQ 192 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +I+ +KA G+VA G +G V VV + ++ ++ + Sbjct: 193 LPDIWISELKALIFGFLAGVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFAVNFVLTT 252 Query: 367 FYFAI 371 Y + Sbjct: 253 IYLQL 257 >gi|60683336|ref|YP_213480.1| hypothetical protein BF3899 [Bacteroides fragilis NCTC 9343] gi|60494770|emb|CAH09576.1| putative membrane protein [Bacteroides fragilis NCTC 9343] gi|301164825|emb|CBW24385.1| putative membrane protein [Bacteroides fragilis 638R] Length = 254 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 1/250 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 I +G I G + + + F I+++ +GV+ + +V+LISF GAV Sbjct: 5 IRVMIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAV 64 Query: 182 IAQQGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 I Q + + + + L E + +++AG+ GS I +E+G+M++ ++ Sbjct: 65 ITIQIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQ 124 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 125 IDALEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYG 184 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 ++ G+IK+ F A I V+ G+ V S +GK T VV S +++ Sbjct: 185 LQYMFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFA 244 Query: 361 DSLFAIFYFA 370 D + Sbjct: 245 DLVLTKLLMG 254 >gi|302551013|ref|ZP_07303355.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468631|gb|EFL31724.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 256 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 112/246 (45%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 G + + + + + I+Q ++V + L+S GAVIA Q Sbjct: 6 VGALRHSGSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTIMPTALVSIPFGAVIALQ 65 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 Q GA+ FS + LRE ++TA++IAG G+AI A++G+ KI +EIDA++ Sbjct: 66 IGSLTRQLGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIRDEIDAMQ 125 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +G+D V L+ PR+ A ++ LL L + + G + + + F + A Sbjct: 126 VLGIDPVHRLVVPRVLASMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLA 185 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L++++ +KA GIVA +G +G V VV + ++ + + + Sbjct: 186 QLSDLWAAEVKALVFGAIAGIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMT 245 Query: 366 IFYFAI 371 YF + Sbjct: 246 AVYFQV 251 >gi|239931478|ref|ZP_04688431.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439854|ref|ZP_06579244.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342749|gb|EFE69705.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 254 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 106/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q ++V + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVSRAIFRRPFQFREFVEQFWFVAGVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G D + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVLQDGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A A+++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQPADLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TALYLQI 248 >gi|332169298|gb|AEE18553.1| protein of unknown function DUF140 [Krokinobacter diaphorus 4H-3-7-5] Length = 245 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S H +G K K + +++ + + + +V ISF GAV+A Q Sbjct: 1 MSYLHSIGEYFLMIKNTFVKPTKGKVLRDLIFKEIDDLIIGSLGIVAFISFFVGAVVAIQ 60 Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L+ + E +V++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNLNNPLLPKSLIGFAARQSIILEFAPTFVSVIMAGKVGSFITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I A++I P L + F IIGA P F S Sbjct: 121 EVMGINSLNYLVFPKIVAMLI-YPFLIAIGMFLGIIGAYTAAVYGGFAPSNDFLSGLQQD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +F K A + + G+ + + +GK TT V + +I+++ + Sbjct: 180 FIPFQLFYAFFKTFLFAFLLATIPAYHGYYMRGGALEVGKASTTSFVWTSVAIILVNFIT 239 Query: 365 AIFYFA 370 + Sbjct: 240 TQLLLS 245 >gi|297191126|ref|ZP_06908524.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721750|gb|EDY65658.1| ABC transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 256 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 112/246 (45%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 G + + + + K + I+Q ++V + L+S GAVIA Q Sbjct: 6 VGALRQSGSLFAMGLDVLRTIPKRPFQVREFIQQAWFVASVTILPTALVSIPFGAVIALQ 65 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 Q GA+ FS + LRE ++TA++IAG G+AI A++G+ KI EEIDA+R Sbjct: 66 IGSLTRQLGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMR 125 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 +G+D + L+ PR+ A ++ LL L + + G + + + F + A Sbjct: 126 VLGIDPIHRLVVPRVLATMLVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLA 185 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 L++++ +KA IVA +G +G V VV + ++ + + + Sbjct: 186 QLSDLWAAELKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMT 245 Query: 366 IFYFAI 371 YF I Sbjct: 246 AVYFQI 251 >gi|194334499|ref|YP_002016359.1| hypothetical protein Paes_1694 [Prosthecochloris aestuarii DSM 271] gi|194312317|gb|ACF46712.1| protein of unknown function DUF140 [Prosthecochloris aestuarii DSM 271] Length = 264 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 116/245 (47%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + K + + + Q G +P+V++ S GA++ Sbjct: 15 QSMKEFFLTMQEFFFFSVRAFVTLPKLRRYWRDFLDQATIAGTDSIPIVLVSSISIGALL 74 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A + L FGA+ ++ +RE+G LL +M++ R GS AE+G+MKI+E+ID Sbjct: 75 AVEVGNLLEDFGAKTMLGRSTALSVIRELGPLLMGLMLSARYGSRNGAELGAMKISEQID 134 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D V L+ PR+ A +I LT +A+F+ + A+ + Y+ I +F++ Sbjct: 135 ALRAFGTDPVAKLVMPRLAAALIVFIPLTAIADFAGLHSAAWLAEHYHKIDPGIFWNAVF 194 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + G +KAP A I +V+ GF+ + +G+ +V S +++I + Sbjct: 195 PRLVLKDFVVGFLKAPVFAIIITLVSSFNGFSATGGTAGVGRSTIKGIVVSSGLILIANF 254 Query: 363 LFAIF 367 + Sbjct: 255 YVSKI 259 >gi|302551012|ref|ZP_07303354.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468630|gb|EFL31723.1| ABC transporter integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 271 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 7/253 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173 +K + +Q G ++ TG K L L + G V V+ Sbjct: 8 LKALEALGTQLSFYGRSLAWTGRTLRRYK--KEVLRLLAEVSFGRGALAVVGGTVGVIAF 65 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +SF TG + QG L+Q G F L + REI L+ + ++ G+ A++G Sbjct: 66 LSFFTGTEVGLQGYAALNQLGTSNFVAFLSAYFNTREIAPLVAGLALSATVGAGFTAQLG 125 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I+EE DA+ MG+ + L++ R+ A +++ L ++ S+ + A + YY Sbjct: 126 AMRISEETDALEVMGVPSLPFLVTTRMIAGFVAVIPLYVIGLLSSYLAARTITTGYYGQS 185 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F ++ K A I +V G+ +G V V S Sbjct: 186 TGTYDHYFQQYLPPVDVLWSFGKVLVFAVLIILVHCFYGYHASGGPAGVGVAVGRAVRTS 245 Query: 354 ISIVIIIDSLFAI 366 I + ++D ++ Sbjct: 246 IVAINVLDLFLSL 258 >gi|29832444|ref|NP_827078.1| ABC transporter integral membrane protein [Streptomyces avermitilis MA-4680] gi|29609563|dbj|BAC73613.1| putative ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 256 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 110/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + + + + + I+Q ++V + L+S GAVIA Q Sbjct: 7 GALRHSGSLFAMALDVVRTIPRRPFQAREFIQQAWFVASVTILPTALVSIPFGAVIALQI 66 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 Q GA+ FS + LRE ++TA++IAG G+AI A++G+ KI EEIDA++ Sbjct: 67 GSLTRQLGAQSFSGAASVLAVLREASPIVTALLIAGAGGTAICADLGARKIREEIDAMQV 126 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+D + L+ PR+ A ++ LL L + + G + + + F + A Sbjct: 127 LGIDPIHRLVVPRVLASMVVAVLLNGLVSVVGVAGGYFFNVVLQNGTPGAYLASFTTLAQ 186 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L++++ KA IVA +G +G V VV + ++ + + + Sbjct: 187 LSDLWAAEAKALVFGAIAAIVASYKGLTAKGGPKGVGDAVNQSVVITFMLLFVTNFVMTA 246 Query: 367 FYFAI 371 YF + Sbjct: 247 VYFQV 251 >gi|291298382|ref|YP_003509660.1| hypothetical protein Snas_0856 [Stackebrandtia nassauensis DSM 44728] gi|290567602|gb|ADD40567.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM 44728] Length = 253 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 111/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G T + + + I+Q +++ + L++ GAVIA Sbjct: 1 MGRMFAGVGRFTGFTIDTFKAVPRRPFQWSEAIKQAWFIASVSILPTALVAIPFGAVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GAE F+ + +RE G ++TA++I+G GSA+ A++G+ KI EE+DA+ Sbjct: 61 QLGSLSKQIGAESFAGAASVLAVVREAGPIVTALLISGAGGSAMCADLGARKIREELDAM 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 T+G+D ++ L+ PR++A + L + + I G I D + + F + Sbjct: 121 ETLGVDPIQRLVVPRMFAGAVVAFFLNGVVSAVGIAGGYIFNVYMQDGTPGSYLASFAAL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +A++ + ++A ++A G +G+ V VV + ++ + + Sbjct: 181 GQVADVVSAQLRAIVFGMVAALIACYLGMNAKGGPKGVGQAVNVSVVVNFMVLFAFNFVM 240 Query: 365 AIFYFAI 371 YF + Sbjct: 241 VALYFQL 247 >gi|256380617|ref|YP_003104277.1| hypothetical protein Amir_6634 [Actinosynnema mirum DSM 43827] gi|255924920|gb|ACU40431.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827] Length = 260 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 113/245 (46%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + + G+ A+S++ + ++Q +++ V L+S GAVIA Q Sbjct: 10 GLLRETGRLFALAGQVVAASFRRPFQVREFVQQCWFLVSVTVLPTALVSIPFGAVIALQL 69 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 Q GA+ F+ + +++ ++TA++IAG GSAI A++GS I EEIDA+ Sbjct: 70 GSLTRQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAICADLGSRTIREEIDAMEV 129 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V L+ PR+ A ++ LL + + ++G D + + F + A Sbjct: 130 LGVSPVHRLVVPRVLAAMVVAVLLNGMVSVVGVMGGYFFNVVLQDGTPGAYLASFSALAQ 189 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L++++ G +KA GIVA G +G V VV + ++ + + Sbjct: 190 LSDLWIGELKALVFGFIAGIVAAYRGLNPAGGPKGVGDAVNQAVVVTFLLLFFANFVLTT 249 Query: 367 FYFAI 371 Y + Sbjct: 250 IYLQV 254 >gi|21220886|ref|NP_626665.1| ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|256787958|ref|ZP_05526389.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|289771845|ref|ZP_06531223.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|8247037|emb|CAB92895.1| putative ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|289702044|gb|EFD69473.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] Length = 254 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 106/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q ++V + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVVRAVFRRPFQFREFVEQFWFVASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS +I EE+DA+ Sbjct: 62 QVGSLTEQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRRIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + I+G + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVIMQGGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYVSELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TAVYLQI 248 >gi|332107650|gb|EGJ08874.1| hypothetical protein RBXJA2T_01025 [Rubrivivax benzoatilyticus JA2] Length = 260 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 1/250 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + LG + S ++ Q++ +G + +++ G V Sbjct: 9 GRFTLEWLRALGHAAYFFVDLLRHSPAALRRFSLVVAQIHAIGNRSLVIILASGMAVGFV 68 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q + L +GA ++++ +RE+G ++ A++ AGR+G+++ AEIG MK E++ Sbjct: 69 LALQMYYALVTYGAAESLGLVVNLSLVRELGPVVAALLFAGRAGTSLTAEIGLMKAGEQL 128 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ M +D +++PR IIS+PLL L + I+GA +V + F+S Sbjct: 129 AAMELMAIDPRSRVLAPRFLGGIISMPLLAALFSAIGILGAWVVAVLLIGVDAGNFWSIM 188 Query: 302 HSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S+ + ++ G++K+ VA+ +G+ + T VV + V+ + Sbjct: 189 QSSVDVWRDVGNGIVKSFVFGVICTAVALYQGYETQATPEGVAHATTRTVVIASLAVLAM 248 Query: 361 DSLFAIFYFA 370 D L F+ Sbjct: 249 DFLLTALMFS 258 >gi|91215158|ref|ZP_01252130.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC 700755] gi|91186763|gb|EAS73134.1| hypothetical protein P700755_12712 [Psychroflexus torquis ATCC 700755] Length = 247 Score = 160 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 2/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +G E K +++++ + +S + +V+ ISF GAVIA Sbjct: 2 LSNYIKSIGQYFIMIYETFRKMTKTSELKRLILQELDDLIISSLGIVVFISFFIGAVIAI 61 Query: 185 QGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q A S F + + E A+++AG+ GS I + IG+M+++E+IDA Sbjct: 62 QTALNFSNPFVPKSLIGFAARQSIILEFAPTFVAIIMAGKVGSYITSSIGTMRVSEQIDA 121 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ + L+ P+I A+ P + ++ F IIGA + F + Sbjct: 122 LEVMGINSLNYLVFPKIIAMC-MFPFVIAISMFVGIIGAYTASVYGGFLSSEQFLAGLQE 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +F +K+ A + V G+ + S +G+ TT V + I+I ++ Sbjct: 181 DFIPFQVFYAFLKSFVFAIILATVPAFHGYYMKGGSLEVGRAATTSFVWTSVIIIFMNYF 240 Query: 364 FAIFYFA 370 + Sbjct: 241 ITQLLLS 247 >gi|262370600|ref|ZP_06063925.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046] gi|262314400|gb|EEY95442.1| toluene tolerance protein Ttg2B [Acinetobacter johnsonii SH046] Length = 259 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+++++ + + +L ++ + + + QMY VGV + Sbjct: 2 NAIALLGRRVIERVRGIGVASLMLLQILFSMPTALG--------VRLFVYQMYRVGVLSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++++ GAV+ Q L FG+E +++ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIIVVSGLFIGAVLGLQMYSILVTFGSEAMLGTAVALTLLRELAPVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIG MK E++ ++ +G+D ++ +ISPR+WA I SLP+L+++ I+G +V Sbjct: 114 TAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++S S+ ++ G +IK+ A +A+ +G+A S + Sbjct: 174 FLGADEGSYWSGIQSSVEFYKDVLNGTIIKSFVFALICTWIAVYQGYACEPTSEGIATST 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ D + F Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257 >gi|123966718|ref|YP_001011799.1| putative transporter, membrane component [Prochlorococcus marinus str. MIT 9515] gi|123201084|gb|ABM72692.1| possible transporter, membrane component [Prochlorococcus marinus str. MIT 9515] Length = 251 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 3/238 (1%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ +K K L Q+ G + +V++ G V Q A QL+ G Sbjct: 14 LIIGGQAINYIFKGKISKNDLFEQLMESGPGSLLIVLITGVAAGTVFNIQVASQLTSMGV 73 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 L+++ RE+ LLTA ++ G+ +A A++G+MK+ E+I+AI + + ++ L Sbjct: 74 SSEIGGLLAVGMAREMAPLLTATLMTGKVATAYAAQLGTMKVTEQIEAITMLRTEPIQYL 133 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS---TATLANIFT 312 + PR+ ++II P+ +L A+ I +Y++P +VF++ S + + +++ + Sbjct: 134 VVPRLLSMIIMSPIQCLLFLSVALWSGQIWSTIFYNVPPSVFWTSVRSGNVSLSSSDLSS 193 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +IK+ I I+A G +G T VV ++ V ++D + F Sbjct: 194 MIIKSVVFGLLISIIACGYGLTTKGGPKEVGTSTTGAVVMTLVTVSLMDVVLTQILFG 251 >gi|198276177|ref|ZP_03208708.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135] gi|198270989|gb|EDY95259.1| hypothetical protein BACPLE_02366 [Bacteroides plebeius DSM 17135] Length = 247 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 LG + G + +F+ + + +M +G++ + +V+LISF GAVI Q + Sbjct: 8 LGKYLMLMGRVFSRPERFRMYFKQYLNEMVQLGINSIGIVLLISFFIGAVICIQIKLNIE 67 Query: 192 QFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 F + L E + +++AG+ GS I +EIG+M++ ++IDA+ MG++ Sbjct: 68 SPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIMGVN 127 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 LI P+I L+ +P L I + F+ +IGA W + I Sbjct: 128 SASYLILPKILGLMTMIPFLVIFSIFAGVIGAFCTAWFAGIMNATDLEYGLQYCFVEWYI 187 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 188 WCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQLLMG 247 >gi|289641747|ref|ZP_06473905.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289508391|gb|EFD29332.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 2/241 (0%) Query: 133 GLVISNTGEFCASSYKFK-GFLLSLIRQMYYVGVSG-VPVVILISFVTGAVIAQQGAFQL 190 G ++ G+ S+ + G+ + QM+ + +P+++ + QG Sbjct: 38 GEMVQLAGQVFGSAIRHPVGYWGEVRDQMFEILKLCWIPMMVSCTAFGFGAPGLQGGNLF 97 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 FG + +RE + A+++AG G+A+ A++G+ +I EEIDA+ +G+D Sbjct: 98 LLFGIPERLGSFFIMASVREFAPWINAMVVAGVMGTAMTADLGARRIREEIDAMEVLGVD 157 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +R LI PR+ A+ + LL ++A ++G + + FF F + AT+ ++ Sbjct: 158 PIRTLIVPRVLAITLMTGLLDLVALAFGVLGGYMASVWVLGANSSAFFENFFANATVTDV 217 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + K IG+V +G +G+ V VV S + + I + +F Sbjct: 218 WASVAKTTIFGLLIGVVCCYKGLHTQGGPIGVGRAVNQAVVISFAAIWIFNYVFTTILLG 277 Query: 371 I 371 + Sbjct: 278 L 278 >gi|126643117|ref|YP_001086101.1| toluene tolerance efflux transporter [Acinetobacter baumannii ATCC 17978] Length = 235 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%) Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 G + QM+ VGV + ++ + G V+ QG L G+E ++S+ LRE Sbjct: 13 GGFGRFVYQMHRVGVMSLLIITVSGLFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRE 72 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + ++ A++ AGR+GSA+ AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+L Sbjct: 73 LAPVVAALLFAGRAGSALTAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPML 132 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAM 329 T++ I+G +V + + F+S + ++ G+IK+ A +A+ Sbjct: 133 TVIFAAIGIVGGKLVGVDFLGVDEGSFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAV 192 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G+A + +T VV S V+ D + F Sbjct: 193 FQGYACDPTPEGIATAMTRTVVYSSLCVLGFDFVLTAVMFG 233 >gi|315122740|ref|YP_004063229.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496142|gb|ADR52741.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 211 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 184/211 (87%), Positives = 206/211 (97%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +GV+GVPV+ILISFVTGAVIAQQGAFQLS FGAEIF+IDLMSILQLREIGVLLTAVM+AG Sbjct: 1 MGVTGVPVIILISFVTGAVIAQQGAFQLSNFGAEIFAIDLMSILQLREIGVLLTAVMVAG 60 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSGSAIVAEIGSMKINEEID+++T+G+D VR+LISPRIWALIISLPLLTILAN+SAI+GA Sbjct: 61 RSGSAIVAEIGSMKINEEIDSLKTIGIDLVRVLISPRIWALIISLPLLTILANYSAIVGA 120 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 SI++WKYYDIPF+VFF+RFHSTATL N+FTGLIKAPFMACAIGIVAMKEGF VG +S+SL Sbjct: 121 SIIVWKYYDIPFSVFFARFHSTATLGNVFTGLIKAPFMACAIGIVAMKEGFGVGTNSDSL 180 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GK+VTTCVVQSIS+VIIIDSLFAIFYFAIGI Sbjct: 181 GKRVTTCVVQSISMVIIIDSLFAIFYFAIGI 211 >gi|285016849|ref|YP_003374560.1| ABC transporter permease [Xanthomonas albilineans GPE PC73] gi|283472067|emb|CBA14574.1| putative abc transporter permease abc transporter, permease protein [Xanthomonas albilineans] Length = 249 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG S + L LIR++Y VG +P++ + G V+ Sbjct: 3 MAASIRALGRAGLFFLTVLRGSLPSRDLLAELIREIYKVGARSLPIIAVGGAFVGLVLTL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+ +GA L+ + RE+ +LTA++ GR+GS+I AE+G M+ ++I A+ Sbjct: 63 QGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D V ++PR WA ++++PLLT + AI + + F+S S+ Sbjct: 123 ELMAIDPVAKAVAPRFWAAVLTVPLLTGIFCSLAISASYFEAIGALGLDRGTFWSALSSS 182 Query: 305 ATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 + ++K+ +VA GF T VV + +V++ + + Sbjct: 183 VDFWADFGVAMLKSAVFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFV 242 Query: 364 FAIFYF 369 + F Sbjct: 243 MSALLF 248 >gi|302560790|ref|ZP_07313132.1| YrbE family protein [Streptomyces griseoflavus Tu4000] gi|302478408|gb|EFL41501.1| YrbE family protein [Streptomyces griseoflavus Tu4000] Length = 254 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 107/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ I Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVSRAVFRRPFQFREFIEQFWFIAGVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + +G D + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGTLGGYFFNVVMQDGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L++++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLSDLYISELKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGIYLQI 248 >gi|319945411|ref|ZP_08019671.1| tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319741197|gb|EFV93624.1| tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 260 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + +G+ IND L ++ + + Q+Y+VG Sbjct: 1 MIGMLARLGRWARHVINDLGFAGRFLMQLLWASLLSLKRP-------RLISEQVYFVGNR 53 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + ++++ G V+ QG + L ++GAE L+++ LRE+G +++A++ AGR+ + Sbjct: 54 SLSIILISGLFVGFVLGLQGYYNLERYGAESSLGLLVALSLLRELGPVVSALLFAGRACT 113 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 +I A IG MK E++ A+ MG+D ++ +++PR A++I+LPLL +L + I+GA +V Sbjct: 114 SITAGIGLMKSGEQLIAMEMMGVDPMKRVLAPRFMAVMIALPLLALLFSAVGIVGAWVVG 173 Query: 287 WKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+S+ + ++ G+IK+ A G +A+ G + + Sbjct: 174 VQMIGVDPGSFWSQMQGGVSFRADVLNGVIKSFVFALLCGFIALVVGHESDATPEGVARA 233 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFA 370 TT VV S V+ D L F Sbjct: 234 TTTTVVISSLAVLASDVLMTALMFG 258 >gi|53715368|ref|YP_101360.1| hypothetical protein BF4084 [Bacteroides fragilis YCH46] gi|253567257|ref|ZP_04844707.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265767855|ref|ZP_06095387.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52218233|dbj|BAD50826.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|251944088|gb|EES84607.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263252527|gb|EEZ24055.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 247 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I G + + + F I+++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYIMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|262377332|ref|ZP_06070556.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145] gi|262307785|gb|EEY88924.1| toluene tolerance protein Ttg2B [Acinetobacter lwoffii SH145] Length = 259 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 70/256 (27%), Positives = 123/256 (48%), Gaps = 3/256 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 I + +G+ + S + G I QMY VGV + ++++ Sbjct: 3 AIAALGRRVIERVQGIGVATLMLLQILFSMPTWLGV-KLFIYQMYRVGVLSLLIIVVSGL 61 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAV+ Q LS FG+E +++ LRE+ ++ A++ AGR+GSA+ AEIG MK Sbjct: 62 FIGAVLGLQMFSILSTFGSESMLGTAVALTLLRELAPVVAALLFAGRAGSALTAEIGLMK 121 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 E++ ++ +G+D ++ +ISPR+WA I SLP+L+++ I+G +V + Sbjct: 122 ATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKMVGVDFLGADEGA 181 Query: 297 FFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++S S+ ++ G +IK+ A +A+ +G+A S + T VV S Sbjct: 182 YWSGMESSVQFYKDVLNGTIIKSFVFALICTWIAVYQGYACVPTSEGIATSTTRTVVYSS 241 Query: 355 SIVIIIDSLFAIFYFA 370 V+ D + F Sbjct: 242 LCVLGFDFVLTAVMFG 257 >gi|117164593|emb|CAJ88139.1| putative ABC-transporter integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 254 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVARAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG +GSAI A++GS I EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLIAGAAGSAICADLGSRTIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + I+G + D + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMGVAVLLNGLVSVVGILGGYVFNVFLQDGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA G+VA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYVSELKALVFGFIAGVVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y + Sbjct: 242 TGVYLQL 248 >gi|291449028|ref|ZP_06588418.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291351975|gb|EFE78879.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 253 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 108/247 (43%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + G + + + ++ + I Q ++V + L+S GAVIA Sbjct: 1 MLAPLRETGKLFALAVAVARAIFRRPFQVREFIEQFWFVASVTILPAALVSIPFGAVIAL 60 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++I+G +GSAI A++GS KI EE+DA+ Sbjct: 61 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLISGAAGSAICADLGSRKIREELDAM 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 121 EVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSAL 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 181 AQLPDLYISEFKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 240 Query: 365 AIFYFAI 371 Y I Sbjct: 241 TAIYLQI 247 >gi|317508868|ref|ZP_07966507.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC BAA-974] gi|316252829|gb|EFV12260.1| hypothetical protein HMPREF9336_02879 [Segniliparus rugosus ATCC BAA-974] Length = 304 Score = 159 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 111/276 (40%), Gaps = 3/276 (1%) Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLL 154 + + L + K +V + Q LGLV+ + + L Sbjct: 18 PTRYVPPGFRTAVQLQSALRKAVVSGFVSAGHQITFLGLVLGAVPKTIRHYRRQIGAQLQ 77 Query: 155 SLI--RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 +I VG + +++ + GA I G L G + + + RE+ Sbjct: 78 DVIWGNGSIIVGGGSIGMLLFMGVCIGASIGVVGFATLDLVGLGPLVGFVSAYVNTRELA 137 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 ++TA+ A ++G I AE+G+M+I+EEIDAI G+ + +I+ R+ A +IS+ L + Sbjct: 138 PMVTAIGFAAQTGCRITAEVGAMRISEEIDAIEAQGIQSIPFVITTRVIAGVISIIPLYV 197 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + + + V+ + ++ F S ++ ++KA AI + +G Sbjct: 198 MTTLLGYVSCAFVVNVVHGEASGTYYHYFDSFIHPIDVVYSVVKAIVFVVAIIAIHGYQG 257 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G + S+ V++ D + I Sbjct: 258 YYASGGPEGVGVAAGRAIRTSLITVVVADMVLTIVL 293 >gi|153809065|ref|ZP_01961733.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185] gi|149128398|gb|EDM19617.1| hypothetical protein BACCAC_03373 [Bacteroides caccae ATCC 43185] Length = 247 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKIAAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVEGGSIAVGKASTDSVVSSSVLILFADLI 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|260061863|ref|YP_003194943.1| hypothetical protein RB2501_09685 [Robiginitalea biformata HTCC2501] gi|88785996|gb|EAR17165.1| hypothetical protein RB2501_09685 [Robiginitalea biformata HTCC2501] Length = 245 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G E K+ +++++ + + ++I ISF G V+A Q Sbjct: 1 MNYLASIGSYAIMIVETFKKPTKWPIMRSLILKEIDELIYGSMGIIIFISFFIGGVVAIQ 60 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A +S + + E T++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNISNPLIPKNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I A+++ P + +A + I+G I A F Sbjct: 121 EVMGVNALNYLVFPKIIAMLL-YPFVVAIAMYVGILGGWIAGVFGGFSSSADFIEGLQLD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK+ A I V GF + + +GK T V + ++I+++ + Sbjct: 180 FIPFHVMYSFIKSVVFAFIIATVPSYHGFYMKGGALEVGKASTVSFVWTSVVIIVMNYIL 239 Query: 365 AIFYFA 370 Sbjct: 240 TQLLLG 245 >gi|255011705|ref|ZP_05283831.1| hypothetical protein Bfra3_21365 [Bacteroides fragilis 3_1_12] gi|313149539|ref|ZP_07811732.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138306|gb|EFR55666.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 247 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + G + + + F I+++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYMMLMGRTFSRPERMRMFFRQYIKEIEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREILLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKITAMVTMIPILVTFSIFAGIIGAFATCWFGGIMTATDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 ++ G+IK+ F A I V+ G+ V S +GK T VV S +++ D + Sbjct: 181 MFVEWFVWCGIIKSLFFAFIIASVSSFFGYTVEGGSIEVGKASTDSVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|169794572|ref|YP_001712365.1| toluene tolerance efflux ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|213158857|ref|YP_002320855.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057] gi|215482161|ref|YP_002324343.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB307-0294] gi|260557005|ref|ZP_05829222.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC 19606] gi|294839769|ref|ZP_06784452.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013113] gi|294860447|ref|ZP_06798216.1| toluene tolerance protein Ttg2B [Acinetobacter sp. 6013150] gi|301347321|ref|ZP_07228062.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB056] gi|301510049|ref|ZP_07235286.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB058] gi|301597237|ref|ZP_07242245.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB059] gi|169147499|emb|CAM85360.1| toluene tolerance efflux transporter (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|213058017|gb|ACJ42919.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB0057] gi|213988817|gb|ACJ59116.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii AB307-0294] gi|260409611|gb|EEX02912.1| toluene tolerance protein Ttg2B [Acinetobacter baumannii ATCC 19606] Length = 259 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I + AH+L +I + + KG + QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGAAAHMLLQIIFS--------FPTKGGFGRFVYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + GAV+ Q L FGAE +S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIIAVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ IIG +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + F+S +T +IF G +IK+ A VA+ +G+A + + Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIFNGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ D + F Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257 >gi|54027607|ref|YP_121849.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54019115|dbj|BAD60485.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 284 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 105/249 (42%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + IS E + ++ + +RQ ++ +L++ G ++ Sbjct: 30 RSLETFGRQITMGISAVAELFIAIFRRRFPFDEFVRQCAFMANVAAAPTLLVAIPIGVIV 89 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q Q GA F + +++ L+T++MIAG GSAI A++GS I EEID Sbjct: 90 SIQVGAVAGQVGATSFIGAANGLGIVQQGAPLVTSIMIAGAVGSAICADLGSRTIREEID 149 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ MG+D +R L++PR+ A ++ LL F + I + F Sbjct: 150 AMKVMGVDPMRRLVAPRLGAAMLVSVLLCGFVVFVGFLTGYIFNIFAQGGTPGSYIGTFS 209 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S A ++ L+K+ I+A G + V + VV S ++ ++ Sbjct: 210 SFAVTRDLLVALVKSLIFGLLAAIIACDTGLNTRGGPGGVANSVNSAVVSSAIMLFGVNL 269 Query: 363 LFAIFYFAI 371 Y A+ Sbjct: 270 GITQIYSAL 278 >gi|225011579|ref|ZP_03702017.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-2A] gi|225004082|gb|EEG42054.1| protein of unknown function DUF140 [Flavobacteria bacterium MS024-2A] Length = 245 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 2/243 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G K+K +++ + + + + +V ISF G V+A Q A Sbjct: 3 ILTHIGNYFIMLKLTFGKFTKWKILKQLILKDIDTLIIGSLGIVSFISFFVGGVVAIQTA 62 Query: 188 FQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 L + E ++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 63 LNLENPLLPKNLIGFAARQSIILEFAPTFISIIMAGKVGSYITSSIGTMRVTEQIDALEV 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I +L + PL+ ++ F I G I A + Sbjct: 123 MGINTHNYLIFPKIVSLSL-YPLVICISMFLGIFGGYIAAVYGGFSSSADYIEGIQMDFI 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +I IK F + + + G+ + + +GK T V + ++I+++ L Sbjct: 182 PFHITYAFIKTSFFSFILATIPAYHGYYMNGGALEVGKASTVSFVWTSVVIILLNYLITQ 241 Query: 367 FYF 369 Sbjct: 242 LLL 244 >gi|325286981|ref|YP_004262771.1| hypothetical protein Celly_2079 [Cellulophaga lytica DSM 7489] gi|324322435|gb|ADY29900.1| protein of unknown function DUF140 [Cellulophaga lytica DSM 7489] Length = 260 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G E K+ +++++ + + ++I ISF G V+ Q Sbjct: 16 MNYIASIGSYFIMIKEVFKKPTKWSIMKKLILKEIDELVFGSLGIIIFISFFIGGVVTIQ 75 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L+ E + E T++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 76 TALNLTNPLIPESLIGFAARQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I AL++ P +A + I G I A F Sbjct: 136 EVMGVNSLNYLVFPKIIALLL-YPFAIAIAMYVGIFGGWIAGVFGGFTTSASFIEGIQLD 194 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK+ A I + G+ + + +GK TT V + +II++ + Sbjct: 195 FIPYHVTYAFIKSIIFAFVIATIPSFHGYYMKGGALEVGKASTTAFVWTSVAIIILNYIL 254 Query: 365 AIFYFA 370 Sbjct: 255 TQLLLG 260 >gi|255693535|ref|ZP_05417210.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565] gi|260620673|gb|EEX43544.1| ABC transporter, permease [Bacteroides finegoldii DSM 17565] Length = 247 Score = 158 bits (401), Expect = 9e-37, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 1/247 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G G + + + F + ++ +GV+ + +V+LISF GAVI Sbjct: 1 MIKALRTVGRYFMLMGRTFSRPERMRMFFRQYLNELEQLGVNSIGIVLLISFFIGAVITI 60 Query: 185 QGAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q + + + + L E + +++AG+ GS I +E+G+M++ ++IDA Sbjct: 61 QIKLNIESPWMPRWTVGYVTREIMLLEFSSSIMCLILAGKVGSNIASELGTMRVTQQIDA 120 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG++ LI P+I A++ +P+L + F+ IIGA W + Sbjct: 121 LEIMGVNSANYLILPKITAMVTVIPILVTFSIFAGIIGAFCTCWFAGVMNAVDLEYGLQY 180 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 I+ G+IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 181 MFNEWFIWAGIIKSLFFAFIIASVSAFFGYTVDGGSIAVGKASTDSVVSSSVLILFADLV 240 Query: 364 FAIFYFA 370 Sbjct: 241 LTKLLMG 247 >gi|257054442|ref|YP_003132274.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584314|gb|ACU95447.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 250 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 110/244 (45%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + + + ++ I+Q +++ + L++ GAVI+ Q Sbjct: 1 MLRETGKLFALALDVARGVFRRPFQFREFIQQAWFIASVTILPTALVAIPFGAVISMQFG 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 Q GA+ ++ + +++ L+ A+++AG GSAI A+IG+ I EEIDA+ + Sbjct: 61 SLAKQLGAQSYTGAGSVLATVQQASPLVVALLVAGAGGSAICADIGARTIREEIDAMEVL 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ V+ L+ PR+ A + LL + + ++G D + + F + A L Sbjct: 121 GVSAVQRLVVPRVLACMFVALLLNGMVSVIGVLGGYFFNVVLQDGTPGAYLASFSALAQL 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++++ G IKA +VA G +G V VV + ++ +++++ + Sbjct: 181 SDLWIGEIKALIFGFIAAVVAAYRGLNPPPGPKGVGDAVNQSVVITFLLLFVVNTVLTLI 240 Query: 368 YFAI 371 Y + Sbjct: 241 YLQL 244 >gi|254423231|ref|ZP_05036949.1| conserved domain protein [Synechococcus sp. PCC 7335] gi|196190720|gb|EDX85684.1| conserved domain protein [Synechococcus sp. PCC 7335] Length = 291 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 1/240 (0%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF 193 + + G+ + + ++ + G V VI + G + Q A ++S+F Sbjct: 51 MALLLAGQVIHRLLRGRFGQRQIMDHLMSAGPRCVASVIATNVCAGLIFGIQTAREMSRF 110 Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 GA + E+ +LTA ++A + GSA AEI +MK+ ++IDA++ + D + Sbjct: 111 GAVSSLGSAFAAGYCSELAPILTAGVLACQVGSAFAAEIAAMKLTQQIDALKMLRTDPID 170 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ A + LP+LT+LA ++ + YY +P F +++++ Sbjct: 171 YLVMPRVIACAVMLPMLTVLALVCGVMSGGFLTTYYYHLPMGTFLDGVRGALSVSDVLLI 230 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + KA I I + G +H +G+ T+ V+ + + ID + A F + I Sbjct: 231 MGKAILFGLVIAIASCSRGLTSALHGKGVGQSATSAVMMAWIALFFIDLVIA-FLALLAI 289 >gi|328880858|emb|CCA54097.1| putative ABC-transporter integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 254 Score = 158 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 105/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q ++V + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVSRAVFRRPFQFREFLEQFWFVASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL + + +G + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMAVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVL 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGIYLQI 248 >gi|296139955|ref|YP_003647198.1| hypothetical protein Tpau_2250 [Tsukamurella paurometabola DSM 20162] gi|296028089|gb|ADG78859.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 267 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 113/256 (44%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + K S G++ + ++++ I Q +++ + L++ Sbjct: 6 RSVAKAAQGGTSALTQAGMIFQLFADIVRNTFRRPFQYREFIEQSWFIASVTILPTALVA 65 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA+++ Q + Q GAE F+ + +++ ++TA+++AG +GSA+ A++G+ Sbjct: 66 VPFGAIVSLQTGSLIGQLGAESFTGAASVLAVVQQGAPVVTALLVAGAAGSAVCADLGAR 125 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + EEI A+ +G++ V+ L+ PR+ +++ L L + ++G Sbjct: 126 TVREEIAAMEVLGINPVQRLVVPRVLGMMLVSMFLNGLVSVVGVVGGYFFNVVLQHGTPG 185 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L ++ G KA G+VA +G G +G V VV + Sbjct: 186 AYLASFSALAQLPDLLVGEFKALVFGLIAGVVAAYKGLHPGGGPKGVGDAVNQSVVITFL 245 Query: 356 IVIIIDSLFAIFYFAI 371 ++ + + Y + Sbjct: 246 LLFFANIILTAVYLQV 261 >gi|256820380|ref|YP_003141659.1| hypothetical protein Coch_1553 [Capnocytophaga ochracea DSM 7271] gi|315223460|ref|ZP_07865317.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga ochracea F0287] gi|256581963|gb|ACU93098.1| protein of unknown function DUF140 [Capnocytophaga ochracea DSM 7271] gi|314946633|gb|EFS98624.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga ochracea F0287] Length = 245 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 2/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + ++ ++R++ + + +V ISF G V+A Q A Sbjct: 4 IAAVGGYFIMLYDVFRKRTRWSIMKDLILREIDDLIFGSIGIVTFISFFVGGVVAVQTAL 63 Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + + E TA+++AG+ GS I + IG+M++ E+IDA+ M Sbjct: 64 NIDNPFIPKYLIGFATRQSIVLEFAPTFTAIILAGKIGSFITSSIGTMRVTEQIDALDIM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ V L+ P+I AL++ P L L + ++G A F Sbjct: 124 GVNSVNYLVFPKIVALMLM-PFLIALGMYLGVLGGWASAVMSGYTTSAEFVQGVQYDFKP 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ K A + + G+ + + +GK T V + ++I+ +S+ Sbjct: 183 YSMIYAFTKTVVFAFFLATIPSYHGYYMKGGALDVGKASTVSFVWTSIVIILSNSVLTQL 242 Query: 368 YFA 370 ++A Sbjct: 243 FYA 245 >gi|226349637|ref|YP_002776751.1| putative YrbE family protein [Rhodococcus opacus B4] gi|226245552|dbj|BAH55899.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 266 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 104/253 (41%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G++ K +G + + E +K L ++Q +++ + +L+ Sbjct: 11 GERSAKARAALRVAPRAVGAFYATSLETYRCMFKRPFHLREFLQQAWFIASVSIMPALLM 70 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + Q L++ GA + + +REIG ++T +++AG +AI A++GS Sbjct: 71 AIPFCMMFVYQINILLAEIGAVDLAGAGAGVAIVREIGPIVTVLVVAGAGSTAICADLGS 130 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 I EEIDA++ +G+D + L PR+ A L L + ++G I Sbjct: 131 RTIREEIDAMKVLGIDPIHRLCVPRVLASTFIAIFLNGLVSAVGLVGGYIATVYMQGASP 190 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + + L + F IKA G+VA G V +G V VV S Sbjct: 191 GQYVTAISIITGLGDFFVAEIKAAVFGMLAGLVACHLGLNVRGGPKGVGDAVNQTVVFSF 250 Query: 355 SIVIIIDSLFAIF 367 ++ + +S+ Sbjct: 251 LLLFLANSIITTL 263 >gi|83594240|ref|YP_427992.1| hypothetical protein Rru_A2908 [Rhodospirillum rubrum ATCC 11170] gi|83577154|gb|ABC23705.1| Protein of unknown function DUF140 [Rhodospirillum rubrum ATCC 11170] Length = 275 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 140/275 (50%), Gaps = 2/275 (0%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 + + + +G+ ++ + + + + + L Sbjct: 2 DSPKTKPGLSQALLKAVERLGQGVIAGVAEIGQASLLGAESLYWL--VVGRFRGQPVRLG 59 Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 +++ Q +G+ +P+V++++F G ++A QG + L FGAE + ++ +RE L Sbjct: 60 AIVEQAMEMGIRALPIVLVMNFTIGMMLAIQGIYSLRMFGAEQQVVLGVAFSVVREFAPL 119 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T +++AGRSGSAI A +G+M IN+EIDA+ MG+ VR L++P + A ++ +PL+T L Sbjct: 120 ITGILVAGRSGSAIAARLGTMTINQEIDALTVMGIVPVRYLVAPPLIAALVMVPLMTFLG 179 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 A++GAS+ + + + FF + L ++ GL K+ A I +V + G + Sbjct: 180 MLVALLGASLTVRIDLGMSLSAFFHQTLDILRLIDLTHGLGKSALFALQIVLVGVVNGVS 239 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 V + +GK T VVQ+IS +I+ D +FA Sbjct: 240 VSGGAEGVGKMTTRSVVQAISAIIVTDMVFAFILT 274 >gi|227536152|ref|ZP_03966201.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300772122|ref|ZP_07081992.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] gi|227244049|gb|EEI94064.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33300] gi|300760425|gb|EFK57251.1| ABC superfamily ATP binding cassette transporter permease protein [Sphingobacterium spiritivorum ATCC 33861] Length = 244 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 + +G I K K + + M +G+ + ++++IS GAV+ Q A Sbjct: 2 LIYHIGKYILLLKSVFKKPEKGKIYWKETMFAMTDIGLGSLGLIVIISTFIGAVMTMQIA 61 Query: 188 FQL-SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FQL S + + E+G ++A+++ G+ GS+I ++IGSM++ E+IDA+ Sbjct: 62 FQLVSDLIPNSIIGQINRDSNILELGPTISALVLMGKVGSSISSQIGSMRVTEQIDALEI 121 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ LI P+I A I +P L I+A F AI+G + + A + + Sbjct: 122 MGINAPGYLILPKILAGITMIPALVIVAIFCAILGGLLGGALSGAVSTADYIQGIQGSFN 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + ++KA I V +GF V + +G+ T VV ++ D L Sbjct: 182 GFTVSVAMVKAVVFGFIITSVPAYKGFYVSGGALEVGEAGTQAVVIGCITILASDYLITA 241 Query: 367 F 367 Sbjct: 242 L 242 >gi|302525561|ref|ZP_07277903.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] gi|302434456|gb|EFL06272.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] Length = 286 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 95/252 (37%), Gaps = 7/252 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILI 174 + Q G ++ + + L + G + V+I + Sbjct: 24 ASLEGLGKQLSFYGRALAWSPRTIRRYG--RETTRLLTEVCFGTGGLAVIGGTLGVMIGM 81 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + TG ++ QG L+Q G + + + RE+ L + ++ G A++G+ Sbjct: 82 TLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGCGFTAQLGA 141 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+I+EEIDA+ M + + L++ R+ A + ++ L + S+ + + + Y Sbjct: 142 MRISEEIDALEVMAVPSMPYLVTTRVLAGVTAVIPLYAVGLLSSYLASRQITIWLYGQSA 201 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + F ++ K + + + G+ +G V V SI Sbjct: 202 GTYDHYFTLFLPPEDVLWSFAKVIVFSVLVILSHCYYGYTASGGPAGVGIAVGRAVRTSI 261 Query: 355 SIVIIIDSLFAI 366 ++ ++D ++ Sbjct: 262 VLISVLDFFLSL 273 >gi|299768645|ref|YP_003730671.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1] gi|298698733|gb|ADI89298.1| toluene tolerance protein Ttg2B [Acinetobacter sp. DR1] Length = 259 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 10/264 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 N +G+ +++ I + AH+L +I + KG QM+ VGV + Sbjct: 2 NTIAWLGRLVIERIRGIGAAAHMLLQIIFSLPS--------KGGFGRFGYQMHRVGVMSL 53 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 ++ + GAV+ Q L FGAE +S+ LRE+ ++ A++ AGR+GSA+ Sbjct: 54 LIITVSGLFIGAVLGLQMYSILVTFGAESMLGTAISLTLLRELASVVAALLFAGRAGSAL 113 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSMK +E++ ++ +G+D ++ ++SPR+WA I+SLP+LT++ IIG +V Sbjct: 114 TAEIGSMKQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIIGGKMVGVD 173 Query: 289 YYDIPFAVFFSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + F+S +T +I G +IK+ A VA+ +G+A + + Sbjct: 174 FLGADEGSFWSGMQNTVRFGHDIINGTIIKSIVFALICTWVAVYQGYACDPTPEGIATAM 233 Query: 347 TTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ D + F Sbjct: 234 TRTVVYSSLCVLGFDFVLTAVMFG 257 >gi|120437216|ref|YP_862902.1| ABC-type transporter permease protein [Gramella forsetii KT0803] gi|117579366|emb|CAL67835.1| ABC-type transporter permease protein [Gramella forsetii KT0803] Length = 245 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + H +G K + +++ + + + +V +SF GAV+A Q Sbjct: 1 MTYLHSIGEYFIMLKGVFGRMTKGSVLRNLIFKEINELIMGSLGIVAFLSFFIGAVVAIQ 60 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A L+ + + E ++++AG+ GS I + IGSM++ E+IDA+ Sbjct: 61 TALNLNNPLIPKSLVAFAARQSVILEFAPTFISIIMAGKVGSFITSSIGSMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ LI P+I A +++ P L +A F I GA + F + Sbjct: 121 EVMGINSKNYLILPKIIA-MLTYPFLIAIAMFLGIAGAYFAAVFGGFVTSDQFLTGLQDD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK A + V G+ + + +G+ TT V + ++II + Sbjct: 180 FNGFHLTYAFIKTFLFAFILATVPSYHGYYMKGGALEVGEASTTSFVWTSVVLIITNYAI 239 Query: 365 AIFYFA 370 + Sbjct: 240 TQLLLS 245 >gi|294632699|ref|ZP_06711258.1| YrbE family protein [Streptomyces sp. e14] gi|292830480|gb|EFF88830.1| YrbE family protein [Streptomyces sp. e14] Length = 254 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 104/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVGRAIFRRPFQAREFVEQFWFLASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++I+G GSAI A++GS I EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVVQQASPLIVALLISGAGGSAICADLGSRTIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL L + I+G + S F S Sbjct: 122 EVMGVSPVQRLVVPRVLAAMGVAVLLNGLVSVVGILGGYFFNVYLQHGTPGAYVSSFSSL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYVSEFKALVFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFLLLFFVNMVI 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGVYLQI 248 >gi|239982859|ref|ZP_04705383.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291454702|ref|ZP_06594092.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291357651|gb|EFE84553.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] Length = 254 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 105/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + E + ++ + Q +++ + L+S GAVIA Sbjct: 2 ITGALRQTGRLFALAAEVTRAIFRRPFQFREFVEQFWFIASVTILPAALVSIPFGAVIAL 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ F+ + +++ L+ A++IAG GSAI A++GS KI EE+DA+ Sbjct: 62 QVGSLTQQLGAQSFTGGASVLAVIQQASPLIVALLIAGAGGSAICADLGSRKIREELDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ V+ L+ PR+ A + LL + + +G + S F + Sbjct: 122 EVMGVSPVQRLVVPRVLATMSVAVLLNGMVSVVGTLGGYFFNIILQGGTPGAYLSSFSAL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ +KA GIVA G +G V VV + ++ ++ + Sbjct: 182 AQLPDLYISELKALIFGFIAGIVAAYRGLNPRGGPKGVGDAVNQSVVITFMLLFFVNMVM 241 Query: 365 AIFYFAI 371 Y I Sbjct: 242 TGLYLQI 248 >gi|149370868|ref|ZP_01890463.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49] gi|149355654|gb|EDM44212.1| hypothetical protein SCB49_04265 [unidentified eubacterium SCB49] Length = 245 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 2/240 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + K + +++ + + + +V ISF G VI Q A L+ Sbjct: 7 IGSYFLMLKKVFGGFTKGSVLRELIFKEIDDLVIGSLGIVAFISFFVGGVITIQTALNLT 66 Query: 192 Q-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + + E ++++AG+ GS I + IGSM++ E+IDA+ MG++ Sbjct: 67 NPLIPKSLIAYATRQSIILEFAPTFMSIIMAGKVGSFITSSIGSMRVTEQIDALEVMGIN 126 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 + L+ P+I A++ PL+ LA F I+G I F T ++ Sbjct: 127 SLNYLVFPKIVAMMF-YPLVIALAMFLGIVGGYIAGVYGGFTNSTDFGIGLRDTFEPFHL 185 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K A I V +GF + + +GK T V + ++I+ + + + Sbjct: 186 VYAFVKTFIFAFIIATVPSWQGFYMKGGALEVGKASTNSFVWTSVLIILANYIVTQLLLS 245 >gi|296179480|gb|ADG96485.1| SupA [Gordonia cholesterolivorans] Length = 257 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 101/247 (40%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I + + +G E + + L+ Q +++ + +L+S Sbjct: 8 AIGKARNGVQTVGSFFLTFWEILKALPRRPFQWRELVAQAWFIASVSIVPTMLMSIPFCV 67 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++ Q L++ GA S I +REIG ++T +++AG +AI A++GS I EE Sbjct: 68 MVVFQINVLLNEIGAIDLSGAGAGIAVIREIGPIVTVLVVAGAGATAICADLGSRTIREE 127 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D ++ L PR+ A + L L + G + + + Sbjct: 128 IDAMRVLGIDPIQRLAVPRVIASCVVAVFLNGLVTAIGLTGGYLYGVFLQGATPGQYITA 187 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 +++ +KA +VA GF G +G V VV S ++ + Sbjct: 188 IPILTGTSDLLISELKAGIFGLLAAVVACHLGFKAGGGPKGVGDAVNQTVVLSFVLLFLA 247 Query: 361 DSLFAIF 367 +++ Sbjct: 248 NAVITTL 254 >gi|88608548|ref|YP_506573.1| putative ABC transporter, permease protein [Neorickettsia sennetsu str. Miyayama] gi|88600717|gb|ABD46185.1| putative ABC transporter, permease protein [Neorickettsia sennetsu str. Miyayama] Length = 250 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 115/246 (46%), Gaps = 2/246 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 N + I G + S K + +I+Q++ +G +P+V + GA Sbjct: 1 MYNHIKNTIKIFGDFTLFSLSTFLSGR--KIYFSEIIKQLFLIGYYSMPIVAFSAVFIGA 58 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L F ++ +++ REIG ++ +++AGR S I AEIG+M++ E+ Sbjct: 59 MLAFHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +D +R++ ++ L+ P+I A +IS P+L I++ ++G ++ + ++ S Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIVSTLFGMLGGYLIGTYKFAFSKMLYVSD 178 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + T ++ G+ K+ F V+ + +G VT VV S ++++ Sbjct: 179 TLTFLTSKDLIAGMTKSFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238 Query: 361 DSLFAI 366 + L + Sbjct: 239 NYLITL 244 >gi|269124784|ref|YP_003298154.1| hypothetical protein Tcur_0519 [Thermomonospora curvata DSM 43183] gi|268309742|gb|ACY96116.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 288 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 101/205 (49%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V+ +SF G I QG L GAE F + S +REI ++ AV +A + GSA Sbjct: 77 VFVIFTMSFFVGTEIGLQGYTGLRSIGAESFMGLVGSFANVREITPVIAAVALAAQCGSA 136 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 AE+G+M+I+EEIDA+ MG+ L+ R+ A +I+L L ++A F++ ++ Sbjct: 137 FTAELGAMRISEEIDALEVMGISSFTYLVCTRVLAALIALVPLYLIALFASFFSTRLITT 196 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +++ + V+ F + ++ IK A A+ + G+ +G+ Sbjct: 197 QFFGLAPGVYDYYFQLYLPMIDLVYSSIKVAVFAFAVIAIHCYYGYYATGGPAGVGRATG 256 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372 + SI +++ ++ L + ++ G Sbjct: 257 RAIRLSIIVIVTLNLLLSYLFWGNG 281 >gi|190343261|gb|ACE75649.1| ABC transporter permease protein [Candidatus Nitrospira defluvii] Length = 259 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 122/257 (47%), Gaps = 2/257 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G+K + + A + + + + L L+RQ+ + GV +P Sbjct: 1 MIEWVGRKAIAGYTYLAALATLFTQAVLDL--LLPTRQGRGETLRVLVRQILFTGVDALP 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V +I+ + G +I Q QL + GA ++ + +RE+G L+TA ++ GRSG+AI Sbjct: 59 VTTVIALLLGIIIVTQAGTQLPRLGAGGLVGSIIVVTVIRELGPLITAFIVVGRSGTAIA 118 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G+M + E+ A+R MG+ R +I PR+ +++S+ LT+ + A++G ++ Sbjct: 119 TELGNMSVTREVVALRLMGISISRFVIMPRMVGMVLSMLCLTLYFDVVAVLGGYLIADAQ 178 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 IPF F + ++ IK A+ + G AV + ++ T Sbjct: 179 LTIPFYAFVESITKALSTTDVLMTAIKGLSFGSAVAAICCYHGLAVRSSFTEVPQQTTRA 238 Query: 350 VVQSISIVIIIDSLFAI 366 ++ S + ++ID + + Sbjct: 239 MINSFVLCLLIDVVVTV 255 >gi|78223740|ref|YP_385487.1| hypothetical protein Gmet_2543 [Geobacter metallireducens GS-15] gi|78194995|gb|ABB32762.1| protein of unknown function DUF140 [Geobacter metallireducens GS-15] Length = 253 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 116/246 (47%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L + ++ + I Q+ +GV + +V L TG V+ Sbjct: 5 RTVKWFLQELQAFFVLSARAVVRIFRRPWYYREFITQLDKMGVGSLFIVCLTGLFTGMVM 64 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + ++++ ++E+G +L+++M+AGR GS+I AE+G+M + E++D Sbjct: 65 ALQALIQLKPFAATSYVGGMVAVTMVKELGPVLSSLMVAGRVGSSITAELGTMVVTEQVD 124 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D + L++ R+ A+++++PLL ++ + A++G ++ YDI +++ Sbjct: 125 AMRVEGTDIITRLVTSRLKAMLVAMPLLAVVTDALALLGGYVIASG-YDINLLMYWKSLS 183 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ G+ K I ++ G + +G VV S +V++ D Sbjct: 184 QFMVFQDLVEGVAKPFVFGFLIAMIGSYAGLTTSGGAEGVGAAAKRAVVVSSIMVLVCDF 243 Query: 363 LFAIFY 368 + Sbjct: 244 FMTKIF 249 >gi|300784334|ref|YP_003764625.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793848|gb|ADJ44223.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 283 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 105/260 (40%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG-------- 167 + +++I LG ++ + A S + + + +R + V Sbjct: 11 RTLEYIARPGQSLEGLGKQLAFAAKALAWSPRTIRRYSRETLRLLTEVCFGTGGLAVIGG 70 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+I ++ TG ++ QG L+Q G + + + RE+ L + ++ G Sbjct: 71 TLGVMIGMTLFTGLIVGLQGYSALNQLGTAALTGFISAYFNTREVAPLSAGLALSATVGC 130 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ MG+ + L++ R+ A + ++ L + S+ + + + Sbjct: 131 GFTAQLGAMRISEEIDALEVMGVPSMPYLVTTRVLAGVAAVIPLYAVGLLSSYLASRQIT 190 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y + F ++ K + + + GF +G V Sbjct: 191 IWLYGQSAGTYDHYFTLFLPPGDVLWSFGKVIVFSVLVILSHCYYGFNASGGPAGVGVAV 250 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V SI ++ ++D ++ Sbjct: 251 GRAVRTSIVLISVLDFFLSL 270 >gi|262201121|ref|YP_003272329.1| hypothetical protein Gbro_1128 [Gordonia bronchialis DSM 43247] gi|262084468|gb|ACY20436.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 268 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 114/256 (44%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + G ++ + ++ I+Q +++ + LI+ Sbjct: 7 RGVDRIAKAGTGALEQTGNIVQLFVDVARQTFVRPFQWREFIQQAWFIASVTILPTALIA 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA+++ Q + Q GAE ++ ++ +++ L+T+++IAG +GSA+ A++GS Sbjct: 67 IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVIQQGSPLVTSLLIAGAAGSAVAADLGSR 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 I EEIDA+ +G++ ++ L+ PR+ A+++ LL L I G Sbjct: 127 TIREEIDAMEVLGINPIQRLVVPRVLAMVLVAMLLNGLVAVIGIGGGYFFNVVVQGGTPG 186 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L +++ +KA G+VA +G +G V VV + Sbjct: 187 AYLASFGALAQLPDLYVSTLKAAIFGVLAGVVAAYKGLHPKGGPKGVGDAVNQSVVITFL 246 Query: 356 IVIIIDSLFAIFYFAI 371 ++ + + + Y I Sbjct: 247 LLFLANLIITAVYLQI 262 >gi|324997539|ref|ZP_08118651.1| hypothetical protein PseP1_02183 [Pseudonocardia sp. P1] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 99/253 (39%), Gaps = 1/253 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + G + + + + ++ Q + ++ ++ ++ V G Sbjct: 26 SLGTQLRNGVSTAGEIFRFSTATIRGFRDVRHYSSEVLHQAGILILTSGLIIWVMQGVMG 85 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V + ++ L Q GA ++S + +RE+ + + A + G +VAE+GSM+I++ Sbjct: 86 TVCGLEASYTLKQIGAPLYSGIFNAYCSIREMAPYMWGYIFAAKVGCGLVAELGSMRISD 145 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFF 298 EIDA+ MG+ L+ R+ A +++P L + + +V + + Sbjct: 146 EIDAMEVMGIKARSYLVGTRVIAAWLAIPFLYTVGLGIMYVTMYLVTVVQLGGVSPGGYL 205 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + LIK I V GF +G+ ++ ++ ++ Sbjct: 206 YIFWLYQNPLDFLYSLIKVMSFGTTIVFVGCYFGFNATGGPVGVGRNTAKAMMINMVLIH 265 Query: 359 IIDSLFAIFYFAI 371 I+ L ++ + Sbjct: 266 ILGVLGTQLFWGL 278 >gi|300313364|ref|YP_003777456.1| organic solvents resistance ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076149|gb|ADJ65548.1| ABC-type transport system involved in resistance to organic solvents, permease component protein [Herbaspirillum seropedicae SmR1] Length = 259 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 115/238 (48%), Gaps = 1/238 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + +G SS + Q++++G + ++ + Sbjct: 6 VSGLGRSLREFVVGVGFAGRMFASMLGSSLGLLRRPRLITDQIHFIGNYSLVIIAVSGLF 65 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+ QG + L+++G+E L+++ RE+G ++TA++ AGR+G+++ AEIG MK Sbjct: 66 VGFVLGLQGYYTLNKYGSEQALGLLVALSLTRELGPVVTALLFAGRAGTSLTAEIGLMKA 125 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M ++ ++ +++PR WA +I++P+L + + +IG +V + F Sbjct: 126 GEQLSAMEMMAVNPLQRVVAPRFWAGVIAMPVLAAIFSAVGVIGGYVVGVLLIGVDEGAF 185 Query: 298 FSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 +S+ + +I G++K+ A+ VA+ +G+ + + T VV + Sbjct: 186 WSQMQGGVDVWNDIANGVLKSVVFGVAVTFVALFQGYEAKPTPEGVARATTRTVVIAS 243 >gi|284034023|ref|YP_003383954.1| hypothetical protein Kfla_6152 [Kribbella flavida DSM 17836] gi|283813316|gb|ADB35155.1| protein of unknown function DUF140 [Kribbella flavida DSM 17836] Length = 275 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 7/256 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PV 170 KK + ++ Q ++ +G K L L G V V Sbjct: 9 KKPLNSLDRLGEQLAFYLKALAWSGRSVTRYR--KEILRLLAEVTLGTGALAVIGGTVGV 66 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + ++F TG + QG L+Q G F+ + + + REIG L+ + +A G A Sbjct: 67 ITFLAFFTGTEVGLQGYSALNQIGTSAFAGFVSAYINTREIGPLIAGIALAATVGCGFTA 126 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EEIDA+ M + + L++ RI A +I++ L ++ S+ + + +Y Sbjct: 127 QLGAMRISEEIDALEVMAIPSLPFLVTTRIIAGLIAVVPLYVVGLLSSYFATRLTVTTFY 186 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + FH ++ K A + +V G+ +G V V Sbjct: 187 GQSTGTYDHYFHLFLPPGDVLWSFGKVLVFAVLVILVHCYHGYHASGGPAGVGVAVGRAV 246 Query: 351 VQSISIVIIIDSLFAI 366 SI ++ ++D L ++ Sbjct: 247 RTSIVVINVVDLLLSM 262 >gi|42523258|ref|NP_968638.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100] gi|39575463|emb|CAE79631.1| ABC transporter permease protein [Bdellovibrio bacteriovorus HD100] Length = 274 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 128/266 (48%), Gaps = 2/266 (0%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 S +G+ + K + + ++ +S + F+ + + Q+Y+ Sbjct: 1 MTSLLAQIDSLGRSVTKNLEYTARVLLMV--YLSLRATILDRAQGFRQIVGVISAQIYFT 58 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G +P++ +++ TG++I Q LS G + + ++ +RE G LL A+++ R Sbjct: 59 GWQALPLISVLALGTGSIILLQSLSNLSLLGGTQMIGNFLIVMIVREAGPLLVALVVIAR 118 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SG+A+ +E+G+M+ N EI+A+ +MG++ + ++ PR+ IIS+ L NF A+IG Sbjct: 119 SGTAVASEVGNMRANREIEALESMGINPLSFIVFPRVLGGIISVLGLAFYFNFIALIGGF 178 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V D+P A + ++ L+K F I +V +G +V + + Sbjct: 179 LVTKFVQDLPLAFYTDSLMRAFAKEDVLIFLLKNGFSGMIIFVVCCYQGLSVKRSPHEVP 238 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYF 369 + T VV SI V++ + + ++ Sbjct: 239 QVTTQAVVNSIIFVVVFNLIVTALFY 264 >gi|257054989|ref|YP_003132821.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584861|gb|ACU95994.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 281 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 105/261 (40%), Gaps = 10/261 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG------- 167 +++ ++ S LG + + A + + + ++R + V Sbjct: 8 QRVAHTLDRRLSFLDTLGESVLFSLRALAWIPRALRRYPREIVRLLAEVSFGSGALAVIG 67 Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V++ ++ TG V+ QG L Q G F+ + + REI L+ + ++ G Sbjct: 68 GTIGVMVGMTMFTGIVVGLQGYTALDQVGTAAFAGFISAYFNTREIAPLVAGLALSATVG 127 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++GSM+I+EEIDA+ MG+ V L++ R+ A ++ L + ++ + + + Sbjct: 128 CGFTAQLGSMRISEEIDALEVMGVPSVPYLVTTRVIAGFCAIIPLYAIGLLTSYVASRQI 187 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 +Y + F ++ K + + + GF +G Sbjct: 188 TVWFYGQSEGTYDHYFELFLPPEDVLWSFGKVLLFSVVVVMTHCYYGFRASGGPAGVGVA 247 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V +I V ++D ++ Sbjct: 248 VGRAVRTAIVAVALLDFFASL 268 >gi|118581609|ref|YP_902859.1| hypothetical protein Ppro_3208 [Pelobacter propionicus DSM 2379] gi|118504319|gb|ABL00802.1| protein of unknown function DUF140 [Pelobacter propionicus DSM 2379] Length = 256 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 117/246 (47%), Gaps = 1/246 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 H L S G A ++ + + Q +G + + + +L +G V+ Sbjct: 8 RVLIRFFHGLQSYFSLGGGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVM 67 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q QL F A + +++ ++E+G +L ++M+AGR GSAI AE+G+M + E++D Sbjct: 68 ALQALIQLKPFAATSYVGGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVD 127 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R G D ++ L +PR+ A+++++PLLT+ + +++G ++ Y I ++ S Sbjct: 128 AMRVEGTDIIQRLATPRLKAMLLAMPLLTVATDVISLVGGYVMSAGYG-INPIMYVSGLS 186 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++ GL+K F I + G + +G VV S +++ D Sbjct: 187 QFMVFQDLIEGLVKPLFFGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVTILVSDF 246 Query: 363 LFAIFY 368 + + Sbjct: 247 FISKIF 252 >gi|224025978|ref|ZP_03644344.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM 18228] gi|224019214|gb|EEF77212.1| hypothetical protein BACCOPRO_02729 [Bacteroides coprophilus DSM 18228] Length = 247 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 1/243 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + G A + + + I +M +G++ + +V+LISF GAVI Q Sbjct: 5 ISTLGKYLMLMGRVFARPERIRMYFKQYINEMVQLGINSIGIVLLISFFIGAVICIQIKL 64 Query: 189 QLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + F + L E + +++AG+ GS I +EIG+M++ ++IDA+ M Sbjct: 65 NIESPWMPRFVVGYTTREILLLEFSSSIMCLILAGKVGSNIASEIGTMRVTQQIDALEIM 124 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I L+ +PLL I + F+ IIGA W + Sbjct: 125 GINSASYLILPKILGLMTIIPLLVIFSIFAGIIGAFCTAWFAGIMNATDLEYGLQYCFIE 184 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 I+ IK+ F A I V+ G+ V S ++GK T VV S +++ D + Sbjct: 185 WYIWCSFIKSLFFAFIIASVSAYFGYTVEGGSIAVGKASTDSVVSSSVLILFSDLILTQL 244 Query: 368 YFA 370 Sbjct: 245 LMG 247 >gi|312141009|ref|YP_004008345.1| integral membrane protein yrbe4b [Rhodococcus equi 103S] gi|325675354|ref|ZP_08155038.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311890348|emb|CBH49666.1| putative integral membrane protein YrbE4B [Rhodococcus equi 103S] gi|325553325|gb|EGD23003.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 286 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 7/259 (2%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167 +K + ++++ Q I+ T K L L + G Sbjct: 17 RWARKPLDVLDNAGEQMSFYSRAIAWTPRTLRRYR--KEMLRLLAEVTFGSGALAVIGGT 74 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V++++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 75 IGVIVMMSGFTGVVVGLQGFAALDQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCG 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + +V Sbjct: 135 FTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVVST 194 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+ ++ K A + ++ GF +G V Sbjct: 195 VFNGQSSGSYDHYFNLFLPPEDVLWSFGKVLVFAFVLILIHCYYGFHARGGPAGVGVAVG 254 Query: 348 TCVVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 255 HAVRTAIVTIAVLDFFLSL 273 >gi|226364103|ref|YP_002781885.1| YrbE family protein [Rhodococcus opacus B4] gi|226242592|dbj|BAH52940.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 264 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 99/236 (41%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + E +K ++Q +++ + +L++ + Q L+ Sbjct: 26 VGAFYATSMETVRCMFKRPFHAREFVQQAWFIAGVSIMPALLMAIPFCMMFVYQINILLA 85 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S + +REIG ++T +++AG +AI A++GS I EEIDA++ +G+D Sbjct: 86 EIGAVDLSGAGAGVAIIREIGPVVTVLVVAGAGSTAICADLGSRTIREEIDAMKVLGIDP 145 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 ++ L PR+ A + L L + ++G I + + L + Sbjct: 146 IQRLCVPRVLASTLIGMFLNGLVSAVGLVGGYIATVYMQGASPGQYVTAISILTGLPDFL 205 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +KA G+VA G +G V VV S ++ + +S+ Sbjct: 206 VSEVKAAVFGMLAGLVACHLGLNAKGGPKGVGDAVNQTVVFSFLLLFLANSVITTL 261 >gi|326382983|ref|ZP_08204672.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL B-59395] gi|326198119|gb|EGD55304.1| hypothetical protein SCNU_08601 [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 112/256 (43%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + K G ++ + + I+Q +++ + LI+ Sbjct: 7 RGVDKLAKAGEGALAQTGNIVQLFVDVARQLFVRPFQWREFIQQAWFIASVTILPTALIA 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA+++ Q + Q GAE ++ ++ +++ L+T++++AG +GSA+ A++GS Sbjct: 67 IPFGAIVSLQTGSLIKQLGAESYTGAASVLVVVQQGSPLVTSLLVAGAAGSAVAADLGSR 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 I EEIDA+ +G++ V+ L+ PR+ A+++ LL L I G Sbjct: 127 TIREEIDAMEVLGINPVQRLVVPRVLAMVLVAVLLNGLVAVVGIGGGYFFNVVVQGGTPG 186 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + F + A L +++ +KA G+VA +G +G V VV + Sbjct: 187 AYLASFGALAQLPDLYISTLKAVIFGVIAGVVAAYKGLNPKGGPKGVGDAVNQSVVVTFL 246 Query: 356 IVIIIDSLFAIFYFAI 371 ++ + + + I Sbjct: 247 LLFFANLIITAVFLQI 262 >gi|262196627|ref|YP_003267836.1| hypothetical protein Hoch_3441 [Haliangium ochraceum DSM 14365] gi|262079974|gb|ACY15943.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 258 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 111/230 (48%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G + + G + + E + + +I QMY +GV +P+V L Sbjct: 4 GAPLRALGRSALGLCRDTGGIAALGVEVVRALVPPRIDGRMVIDQMYKMGVQSLPIVALA 63 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 +F G ++A Q + Q GA RE+G ++ A+M +GR G+ A++G+ Sbjct: 64 AFFAGVLMALQSGVIVRQLGATSLLGWGGGFAIFRELGPVVIALMFSGRVGANNAADLGN 123 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MKI E++D +R + +D VR L++PRI A++ +L LTI+ N A+ G ++ +D+ F Sbjct: 124 MKITEQLDGLRALAIDPVRYLVAPRIVAMVGALVSLTIIGNSIALQGGTVFSMLLFDVEF 183 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 F+ + ++ G+IK+ I + + G +V + +G+ Sbjct: 184 ITLFTSLVDNISPFDLLHGVIKSAVFGVFIALTSCYFGLSVRGGAVGVGR 233 >gi|119714948|ref|YP_921913.1| hypothetical protein Noca_0701 [Nocardioides sp. JS614] gi|119535609|gb|ABL80226.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 261 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 116/247 (46%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + + G + + + +K L I+Q +++ + L++ GAVIA Sbjct: 9 ALAPVGTAGKFFAFGLDVMRALFKRPFQLREFIQQAWFIASVTIIPTALVAIPFGAVIAL 68 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q + QFGA+ F+ + +++ + TA++IAG GSAI A++G+ KI EE+DA+ Sbjct: 69 QVGGLIKQFGAQSFTGSASVLAVVQQAAPIGTALLIAGAGGSAIAADLGARKIREELDAM 128 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+D ++ L+ PR+ A ++ L L + + G + D + + F + Sbjct: 129 MVLGIDPIQRLVVPRVLAAMLVAVFLNGLVSVVGVAGGYVFNVILQDGTPGAYLASFTAL 188 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + L +++ G+ KA +VA +G +G V VV + ++ I++ + Sbjct: 189 SQLPDLWQGMAKALVFGLIAAVVACYKGMNAAGGPKGVGDAVNESVVVTFILLFIVNFVM 248 Query: 365 AIFYFAI 371 + Y + Sbjct: 249 SAIYIQL 255 >gi|325954854|ref|YP_004238514.1| hypothetical protein Weevi_1232 [Weeksella virosa DSM 16922] gi|323437472|gb|ADX67936.1| protein of unknown function DUF140 [Weeksella virosa DSM 16922] Length = 250 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 3/233 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + LG + + KFK F +IR++ +G+S + +V IS GAV+A Sbjct: 2 AMKLFENLGRYVLLMTKVFQKPIKFKYFWKLIIREVMDLGMSSLGIVTFISTFMGAVVAI 61 Query: 185 QGAFQLSQ---FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 Q A + + ++ + E + ++++AG+ GS I + IG+M++ E+I Sbjct: 62 QMAQNFRGSEIPVPDAYIGYATKVVLVLEFSPTIVSLILAGKVGSYIASSIGTMRVTEQI 121 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ MG++ LI P+I A + P L ++ I+G ++ F Sbjct: 122 DALDVMGINSPNFLILPKIIACVFFFPFLIAISIGFGILGGHLIGVFTKMWAPVDFVQGL 181 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 L K A I V G+ V S +G+ TT VV + Sbjct: 182 QMGMALKFYIYTFFKTMVFAFVIATVPAYYGYYVSGGSLEVGRSSTTAVVWTS 234 >gi|90408209|ref|ZP_01216376.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3] gi|90310655|gb|EAS38773.1| hypothetical protein PCNPT3_11414 [Psychromonas sp. CNPT3] Length = 259 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 133/255 (52%), Gaps = 2/255 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + +S + + G K I Q++ +G+ +P+++ Sbjct: 6 VSAVGRESLALIQVSGRACLLLTRTL-CVKPHKKLFSLFIVQIFQLGILSLPIILTAGLF 64 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ QG + L + AE ++++ LRE+G +++A++ AGR+GSA+ AEIG M+ Sbjct: 65 IGMVLSLQGYYVLVAYAAEENLGSMVALSLLRELGPVVSALLFAGRAGSALTAEIGLMQS 124 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ ++ MG+ ++ +++PR+ A +I+LP+LT+L N AI G ++ + I F Sbjct: 125 TEQLASMEMMGVSPLKRVLAPRLLAGVITLPMLTLLFNVFAIWGGYLIGVHWMGIDAGSF 184 Query: 298 FSRFHSTAT-LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +S + +++ G+IK+ A I VA+ G+ V ++ + + TT VV S + Sbjct: 185 WSVMQGSVDLFSDVGNGIIKSVIFALIITWVALYNGYYVIPNAQGISRSTTTTVVVSSLL 244 Query: 357 VIIIDSLFAIFYFAI 371 ++ +D + +F F + Sbjct: 245 ILAMDFILTVFMFGM 259 >gi|254447411|ref|ZP_05060877.1| ABC transporter permease protein [gamma proteobacterium HTCC5015] gi|198262754|gb|EDY87033.1| ABC transporter permease protein [gamma proteobacterium HTCC5015] Length = 290 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 113/259 (43%), Gaps = 2/259 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G+ +V+ ++ L + + + + + L + Q+Y+ G + Sbjct: 26 QVGRYVVQRTVFLFELLRLIYLGVRTSWFEQGYASRAR--LAVIGAQVYHTGFKALGTAT 83 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ V GA++ Q + QL G ++ ++ +RE+ L+TA ++ RSG+A+ E+ Sbjct: 84 PLAVVAGALVIFQASNQLYIVGGREHIGQIVIMIVVRELAPLVTAFIVIARSGTAVATEV 143 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 +M+ N EI+++ +G+ ++ PRI A +I+ L +A+ G V + ++ Sbjct: 144 ANMRANHEIESLEALGIHPYAYVVFPRIMAGMIATICLAFYFMVAAMYGGYFVTVPWSNL 203 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + +F + + + K I ++ G V + + T V+ Sbjct: 204 NVSTYFYALDEAIQIRDYVLFITKTLVSGALIFSISCYYGLQVKQGHDEVPIATTRAVIH 263 Query: 353 SISIVIIIDSLFAIFYFAI 371 ++S +I + ++ ++ Sbjct: 264 ALSYIIFFNLAASVVFYVY 282 >gi|84684701|ref|ZP_01012601.1| membrane protein [Maritimibacter alkaliphilus HTCC2654] gi|84667036|gb|EAQ13506.1| membrane protein [Rhodobacterales bacterium HTCC2654] Length = 244 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 104/243 (42%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G V + L R +G +PVV L + TGA +A Q Sbjct: 1 MLRRIGSVTLFFLNAVIRFPATLRYPRELARAFLQIGWLSLPVVGLTAVFTGAALALQIY 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 S+ AE +++I +RE+G ++ +MIA R S+I AE+ +MK++E++DA+ T+ Sbjct: 61 AGGSRISAEAVVPQIVAIGIVRELGPVMVGLMIAARVTSSIAAELATMKVSEQVDALTTL 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 D + L +PR+ A ++++P+L L + + G +V + + + + Sbjct: 121 STDPMTYLTAPRVLAGLVTVPILVGLGDILGLFGGFVVATQGLGFNGPSYVTTSWNFLDP 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +I L K +A G G + +G + V + +V+ + Sbjct: 181 VDIVLSLTKGAVFGGIAVTLACHAGLNAGRGAQGVGLATKSAVQAAAILVLAANVALTGL 240 Query: 368 YFA 370 +F Sbjct: 241 FFG 243 >gi|162451969|ref|YP_001614336.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] gi|161162551|emb|CAN93856.1| putative ABC transport system permease protein [Sorangium cellulosum 'So ce 56'] Length = 285 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 3/278 (1%) Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK 148 + + +S + + S + S K Sbjct: 2 PSPDKSSSDRPSAGPPSSELRDLAPEASGVAAIGAAALSLFQSARELYSVFVRTLYYCAK 61 Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAE-IFSIDLMSILQ 207 + ++++QMY +G + + ++ G ++ Q Q + + L Sbjct: 62 GRREPGAVLQQMYEIGNKSLFFLTVVMGFIGMIMVFQAGQQAKRVIPDLTMLGATYLELL 121 Query: 208 LREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISL 267 +R++ + A+M+A R G+ I AEIGSM + E++DA+R D + LI PR A ++ Sbjct: 122 VRDLAASIAALMLATRVGAGIAAEIGSMVVTEQVDALRMCAADPIDYLIKPRFIASLLMT 181 Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 L + + + + + +D+ F + S ++ TGL K AI +V Sbjct: 182 TCLIVWSAAVSFTTGMVTAYSMFDVSPETFMN--VSLVDAGDLATGLAKCVAYGAAIPVV 239 Query: 328 AMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + G + S +G T VV S VI+++ L + Sbjct: 240 SGHSGLSTFGGSEGVGWATTRAVVNSSLAVIVLNMLIS 277 >gi|163786261|ref|ZP_02180709.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium ALC-1] gi|159878121|gb|EDP72177.1| hypothetical protein FBALC1_13787 [Flavobacteriales bacterium ALC-1] Length = 245 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 96/232 (41%), Gaps = 2/232 (0%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 H +G + K+ +++ + + + + +V I+F G V+A Q + Sbjct: 3 YLHNIGAYFIMIKDIFRKPTKWSVMKTLILKDIDDLIIGSLGIVAFIAFFVGGVVAIQTS 62 Query: 188 FQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 ++ + + E ++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 63 LNINNPLIPKYLVGFATRQSIILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEV 122 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MG++ + L+ P+ AL + P + +A F ++G + + + Sbjct: 123 MGINAINYLVFPKFIALTL-YPFVISIAMFLGVLGGMVACVYGGYGTLEDYIQGIQTDFI 181 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 +I IK A + + G+ + + +GK TT V + ++I Sbjct: 182 PFHIVYAFIKTLVFAFILATIPSFYGYFMKGGALEVGKASTTSFVWTSVVII 233 >gi|295690359|ref|YP_003594052.1| hypothetical protein Cseg_2991 [Caulobacter segnis ATCC 21756] gi|295432262|gb|ADG11434.1| protein of unknown function DUF140 [Caulobacter segnis ATCC 21756] Length = 266 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 115/250 (46%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 I + +G V G L RQ+ +G +PVV L + Sbjct: 12 IRSLGARATIAVRAVGAVGLFAGRGVICILTPPWRLGHWGRQLTTIGFFSLPVVALTALF 71 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TGA +A + A ++++ RE+G +L A+M+AGR +AI AEIG+M+ Sbjct: 72 TGAALALNIHIGGGRLNAAQAMPQIVALGITRELGPVLAALMLAGRVSAAIAAEIGAMRA 131 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+RT+ D +R L++PR+ A +++LPLLT++A+ + G +V D + Sbjct: 132 TEQLDAMRTLSTDPIRYLVAPRLAAAVLALPLLTLVADIIGVAGGGVVAVGVLDFSAPTY 191 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 T +I +GL+KA + ++ G+ + +G+ T VV + ++ Sbjct: 192 ARAAARFLTGWDIGSGLVKAAVFGFVVALMGCYHGYVATGGARGVGRATTRAVVSAAILI 251 Query: 358 IIIDSLFAIF 367 D L Sbjct: 252 FACDYLLTTL 261 >gi|262201122|ref|YP_003272330.1| hypothetical protein Gbro_1129 [Gordonia bronchialis DSM 43247] gi|262084469|gb|ACY20437.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 275 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 7/251 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173 +K ++ + Q G ++ + + L L + G + V++L Sbjct: 12 LKVLDGAGEQMSFYGRTLAWMPKTLVHYT--REVLRLLAEVAFGSGGLAVIGGTIGVMVL 69 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S TG V+ QG L Q G++ + L + + RE+ L+ + ++ G A++G Sbjct: 70 MSGFTGVVVGLQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQLG 129 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I+EEIDA+ TM + + L+S R+ A +++ L +L SA + + ++ + Sbjct: 130 AMRISEEIDALETMAVPSIPFLVSTRVIAGFVAVIPLYVLGLLSAYLASRVITTVFNGQS 189 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ A++ K A I +V G+ +G V V + Sbjct: 190 GGSYDHYFNLFLPPADVLWSFGKVLVFAFVIILVHCYYGYYASGGPAGVGVAVGHAVRAA 249 Query: 354 ISIVIIIDSLF 364 + ++ I+D Sbjct: 250 LVLIAILDFFL 260 >gi|111018969|ref|YP_701941.1| hypothetical protein RHA1_ro01972 [Rhodococcus jostii RHA1] gi|110818499|gb|ABG93783.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 274 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 108/259 (41%), Gaps = 7/259 (2%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167 +G+ + ++ + Q I+ + K L L + G Sbjct: 5 RVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVHYR--KEVLRLLAEVTFGSGALAVIGGT 62 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+ ++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 63 IGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCG 122 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + I+ Sbjct: 123 FTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRIIST 182 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+ ++ K A + ++ G+ +G V Sbjct: 183 VFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGYHASGGPAGVGVAVG 242 Query: 348 TCVVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 243 RAVRTAIVTIAVLDFFLSL 261 >gi|226361064|ref|YP_002778842.1| YrbE family protein [Rhodococcus opacus B4] gi|226239549|dbj|BAH49897.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 108/259 (41%), Gaps = 7/259 (2%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG----- 167 +G+ + ++ + Q I+ + K L L + G Sbjct: 17 RVGRAPLNVLDRAGEQMSFYARAIAWSPHTLVHYR--KEVLRLLAEVTFGSGALAVIGGT 74 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+ ++S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G Sbjct: 75 IGVIAMMSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCG 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + ++ Sbjct: 135 FTAQLGAMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVIST 194 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F+ ++ K A + ++ G+ +G V Sbjct: 195 VFNGQSTGSYDHYFNLFLPPQDVLYSFAKVLIFAFVLILIHCYYGYHASGGPAGVGVAVG 254 Query: 348 TCVVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 255 RAVRTAIVTIAVLDFFLSL 273 >gi|296139954|ref|YP_003647197.1| hypothetical protein Tpau_2249 [Tsukamurella paurometabola DSM 20162] gi|296028088|gb|ADG78858.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 279 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 9/254 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPVVI 172 +K ++ + Q G I + A ++ + ++ ++ + V V VV+ Sbjct: 17 LKVLDGAGEQMSFYGRSIGFIPQSIA---RYPKEVGRVLAEVAFGSGALAVIAGTVGVVL 73 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ TG V+ QG L Q GA + + L + + RE+ L+ A+ ++ G A++ Sbjct: 74 MLCGFTGIVVGLQGNAALQQLGASVMTGFLSAYVNTRELTPLVAALAMSATVGCGFTAQL 133 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+I+EEIDA+ M + + L + R+ A +++ L I+ ++ + V Sbjct: 134 GAMRISEEIDALEAMAIPSISFLTATRVIAGFVAVIPLYIVGLLASYVMTRFVNTTLLGQ 193 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F+ + ++ K A + +V G+ +G V V Sbjct: 194 STGTYDHYFNLFLSPDDVLWSFGKVLVFAFVLVLVHCYYGYNASGGPAGVGVAVGRAVRT 253 Query: 353 SISIVIIIDSLFAI 366 S+ + ++D ++ Sbjct: 254 SLVAIALLDFFLSL 267 >gi|227206406|dbj|BAH57258.1| AT1G19800 [Arabidopsis thaliana] Length = 201 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 97/191 (50%) Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 Q + ++ G ++++ RE+ ++T++++AGR GSA AE+G+M+++E Sbjct: 1 MAFTIQFVREFTRLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSE 60 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 + D +R +G D + LI+PR+ A ++LP LT++ + ++++ Y I + Sbjct: 61 QTDTLRVLGADPIDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMD 120 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 H +I + +IK+ I +++ G + +G+ T+ VV S+ + I Sbjct: 121 SAHRALRPWDIVSAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFI 180 Query: 360 IDSLFAIFYFA 370 D + + F+F Sbjct: 181 ADFVLSSFFFQ 191 >gi|149921451|ref|ZP_01909903.1| ABC-type transport system involved in resistance to organic solvents, permease component [Plesiocystis pacifica SIR-1] gi|149817654|gb|EDM77121.1| ABC-type transport system involved in resistance to organic solvents, permease component [Plesiocystis pacifica SIR-1] Length = 251 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 112/249 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G ++ + +++ +L + M + + V L GAVI+ Sbjct: 3 LLRMLQTIGGLVVFMAQVARATFSRPFYLRQTLDIMAILVQRCIVPVGLAVAPVGAVISL 62 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG FGAE + +RE L +VM+A ++GS+I A IG+MK+ +IDA+ Sbjct: 63 QGIAVFKLFGAERMLSAFLGTAIIREYSPALASVMVAAQAGSSIAARIGTMKVRGQIDAL 122 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 M +D VR ++ P + A ++ PLL+++ N I+ I + F + Sbjct: 123 AVMSVDPVRYVVVPGVLACVLVTPLLSVVTNLLGILSGWIFAVPLGGVDHGAFMDNLTAQ 182 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 T +++ GL K +G++A G VG + +GK VV +I +++ D + Sbjct: 183 ITPMDLWVGLGKCAVFGLGVGMIAGYLGLNVGRGAADVGKAANDTVVSTIVLILFTDYVV 242 Query: 365 AIFYFAIGI 373 ++ G+ Sbjct: 243 SMALLGAGL 251 >gi|254797049|ref|YP_003081887.1| ABC transporter permease protein [Neorickettsia risticii str. Illinois] gi|254590296|gb|ACT69658.1| ABC transporter permease protein [Neorickettsia risticii str. Illinois] Length = 250 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 118/246 (47%), Gaps = 2/246 (0%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 N + ILG S K + L +I+Q++ +G +P+V + GA Sbjct: 1 MYNHIKNTIKILGDFTLFNLNIFLSGRKM--YFLEIIKQLFLIGYYSMPIVAFSAVFMGA 58 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L F ++ +++ REIG ++ +++AGR S I AEIG+M++ E+ Sbjct: 59 MLALHTYTGLDLFQSQTMVAQILAKSITREIGPVVVGIVVAGRVASTIAAEIGTMRVTEQ 118 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 +D +R++ ++ L+ P+I A +IS P+L I++ ++G ++ + ++ S Sbjct: 119 VDLLRSLSINVHAYLVLPKIIAALISFPVLEIISALFGMLGGYLIGTYKFAFSKMLYISD 178 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + T A++ +G+ KA F V+ + +G VT VV S ++++ Sbjct: 179 TLTFITYADLMSGMTKAFFFGFITASVSCFNALRATHGAKGVGIAVTNSVVASFVLILLS 238 Query: 361 DSLFAI 366 + L + Sbjct: 239 NYLITL 244 >gi|86143923|ref|ZP_01062291.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis MED217] gi|85829630|gb|EAQ48093.1| hypothetical protein MED217_03715 [Leeuwenhoekiella blandensis MED217] Length = 245 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 93/246 (37%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 +GL K +++++ + + + +V ISF G V+A Q Sbjct: 1 MGYLKEIGLYFMMLKGVFIKPTKTSVLRNLVLKEIDDLIIGSLGIVCFISFFVGGVVAIQ 60 Query: 186 GAFQLSQFGAE-IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A + + E ++++AG+ S I + IG+M++ E+IDA+ Sbjct: 61 TALNMDNPILPKSLIGFASRQSIILEFAPTFISIIMAGKVSSFITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I A++ P + +A F I+G F Sbjct: 121 EVMGINSLNYLVFPKIIAMLF-YPFVIAIAMFLGILGGYTAAVLGGFATGDQFIQGLQED 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + IK A + + G+ + + +GK TT V + +I+ + L Sbjct: 180 FVPFQLVYAFIKTFVFAILLATIPSYFGYYMKGGALEVGKASTTSFVWTSVFIILSNYLI 239 Query: 365 AIFYFA 370 + Sbjct: 240 TQLLLS 245 >gi|257054443|ref|YP_003132275.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584315|gb|ACU95448.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 279 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 10/259 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG------- 167 + + N +LG +S A + + + + ++R + V Sbjct: 6 QNVKNLANRPLRTLDMLGDQMSFYLRALAWTPRAIRRYSKEVLRLLAEVSFGSGSLAVIG 65 Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V++ ++ TG ++ QG L G F+ L S REI L+ + ++ G Sbjct: 66 GTVGVMVGLTLFTGVLVGLQGFSALDSIGTSAFTGFLTSFFNTREIAPLVAGLALSATVG 125 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 S A++G+M+I+EE+DA+ MG+ + L++ RI A I++ L I+ S+ + + V Sbjct: 126 SGFTAQLGAMRISEEVDALEVMGVPSLPYLVTTRIIAGFIAIIPLYIIGLLSSYLASRTV 185 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + Y + F ++F +K + I + G+ +G Sbjct: 186 VVYLYGQSAGTYDHYFDMFLPPEDVFYSFVKVLIFSVLIILTHCYYGYRATGGPAGVGVA 245 Query: 346 VTTCVVQSISIVIIIDSLF 364 V V SI V +++ Sbjct: 246 VGKAVRLSIVTVAVVNFFI 264 >gi|326336634|ref|ZP_08202802.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691104|gb|EGD33075.1| ABC superfamily ATP binding cassette transporter permease protein [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 273 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 2/240 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + +G E K+ +++++ + S + ++ IS Sbjct: 21 TFALSKNKMKHLEAIGRYFLMIYEIFRKRTKWSIMKKLIMKEIDDLMYSSLGIIAFISLF 80 Query: 178 TGAVIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 GAVIA Q A + + + E T++++AG+ GS I + IG+M+ Sbjct: 81 VGAVIAIQMALNIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMR 140 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + E+IDA+ MG++ + LI P+I AL++ P +A I G I + A Sbjct: 141 VTEQIDALDIMGVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAE 199 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F +I LIK+ A + + G+ + + +GK T V + Sbjct: 200 FLEGLKLQFRSFDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTVSFVWTSVA 259 >gi|317125894|ref|YP_004100006.1| hypothetical protein Intca_2778 [Intrasporangium calvum DSM 43043] gi|315589982|gb|ADU49279.1| protein of unknown function DUF140 [Intrasporangium calvum DSM 43043] Length = 256 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 115/247 (46%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + + + + + + I+Q +++ + L+S GAVIA Sbjct: 5 VTGVLRQSGSLFALALDVLRALPRRPFQVKEFIQQSWFLASVTILPTALVSIPFGAVIAL 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q Q GA+ ++ + LRE ++TA++IAG GSAI A++GS KI EEIDA+ Sbjct: 65 QLGTLTRQLGAQSYTGAASVLAVLREASPIVTALLIAGAGGSAICADLGSRKIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+ ++ L+ PR+ A ++ LL L + ++G + + + F + Sbjct: 125 EVLGISPIQRLVVPRVLASMLVAVLLNGLVSVVGVVGGYVFNVIVQGGTPGAYIASFTAM 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A L +++ G +KA GIVA +G G +G V VV + ++ +++ + Sbjct: 185 AQLPDLWAGELKALVFGAIAGIVAAHKGLTAGGGPKGVGDAVNQSVVITFMLLFVVNFVI 244 Query: 365 AIFYFAI 371 YF + Sbjct: 245 TAVYFQV 251 >gi|189423561|ref|YP_001950738.1| hypothetical protein Glov_0490 [Geobacter lovleyi SZ] gi|189419820|gb|ACD94218.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 257 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 118/231 (51%), Gaps = 1/231 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + + Q +G S + + +L TG V+A Q QL F A Sbjct: 24 LAWQAFVRIFHKPYYYRDFAIQFDKLGFSSLFICVLTGLFTGMVMALQALIQLKPFAATS 83 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + ++++ ++E+G +L A+M+AGR GSAI AE+G+M + E++DA+R G D ++ L++ Sbjct: 84 YVGGMVAVTMIKELGPVLAALMVAGRVGSAITAELGTMVVTEQVDAMRVEGTDIIQRLVT 143 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A++++LPLLTI+ + +++G ++ Y I ++ S F + G+ K Sbjct: 144 PRLKAMLLALPLLTIITDAVSMLGGYLIASG-YSISPVMYLSTFTQFMVPLDYLEGVTKP 202 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 A I +++ + G G + +G VV S +V++ D A + Sbjct: 203 LVFAFLITMISCQTGLNTGGGAEGVGAAAKRAVVLSSVLVLMCDFFIAKIF 253 >gi|307718422|ref|YP_003873954.1| transporter [Spirochaeta thermophila DSM 6192] gi|306532147|gb|ADN01681.1| putative transporter [Spirochaeta thermophila DSM 6192] Length = 263 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 ++ +G + + +D + VI T F + L+ Q+ + GV Sbjct: 3 GDILSSLGNRAIARTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+ L++ GA+I QG L QFG ++ + RE+G +LTA ++ RSG+A Sbjct: 61 LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I EIG+M ++ EI+A G+D + L+ PR I+++ LL + N ++G+ V Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + I FA +F +I + L+K+ I +V GF V S + + Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 V + I+ D+L + Y+ Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262 >gi|300783702|ref|YP_003763993.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793216|gb|ADJ43591.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 283 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 108/260 (41%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG-------- 167 ++ + ++ LG I A + + + +L ++R + V Sbjct: 11 RVREAVDRRFGFLDTLGDQILFFIRAIAWTPRALRRYLREVVRLLAEVSFGSGALAVIGG 70 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V+I ++ TG V+ QG L+Q G F+ + + REI L++ + ++ G Sbjct: 71 TIGVMIGMTVATGTVVGLQGYSALNQVGTSAFAGFVSAYFNTREIAPLVSGLALSATVGC 130 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I+EEIDA+ MG+ V L++ R+ A +++ L + S+ + + + Sbjct: 131 GFTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFLAVIPLYAIGLLSSYLASRQIT 190 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 ++ + F ++ K + + + GF +G V Sbjct: 191 VWFFGQSAGTYDHYFLLFLPPGDVLWSFGKVLVFSIVVVLAHCYYGFRASGGPAGVGVAV 250 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 251 GRAVRTAIVAISVLDFFLSL 270 >gi|226305213|ref|YP_002765171.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229490562|ref|ZP_04384400.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226184328|dbj|BAH32432.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229322382|gb|EEN88165.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 286 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 7/253 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173 V ++ + Q I+ T K L L + G + V+ + Sbjct: 23 VNALDRAGEQMSFYARAIAWTPRTLHRYR--KETLRLLAEVTFGSGALAVIGGTIGVIAM 80 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S TG V+ QG L Q G+ + + L + + REI ++ A+ ++ G A++G Sbjct: 81 MSGFTGVVVGLQGFAALEQLGSSVLTGFLSAYVNTREIAPIVAALALSATVGCGFTAQLG 140 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I+EEIDA+ M + V L++ R+ A +++ L I+ +A + + ++ + Sbjct: 141 AMRISEEIDALEVMAVPSVPFLVTTRMIAGFVAVIPLYIVGLLAAYLASRVISTVFNGQS 200 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ ++ K A + ++ GF +G V V + Sbjct: 201 TGSYDHYFNLFLPPQDVLYSFAKVLVFAFVLILIHCYYGFHASGGPAGVGVAVGRAVRAA 260 Query: 354 ISIVIIIDSLFAI 366 I + ++D ++ Sbjct: 261 IVTIAVLDFFLSL 273 >gi|54027028|ref|YP_121270.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018536|dbj|BAD59906.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 284 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 98/234 (41%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 E + + IRQ ++ + ++ V++ Q ++Q GA Sbjct: 45 AVIELFRALAARRFPYHEFIRQCAFMSNVSAAPTVFVAIPIAVVVSIQVGALVNQVGATT 104 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F + + +R+ L+T++MIAG GSAI A++GS I EEIDA+ MG++ VR L++ Sbjct: 105 FIGAVAGLGIIRQGAPLVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRRLVA 164 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A ++ LL F A + F F S A +++ L+KA Sbjct: 165 PRLVAAVLVSMLLCGFIVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKA 224 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 I+A G + V + VV S ++ + + Y + Sbjct: 225 AIFGALTAIIACDIGLHAKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTL 278 >gi|315185558|gb|EFU19327.1| protein of unknown function DUF140 [Spirochaeta thermophila DSM 6578] Length = 263 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 ++ +G + + +D + VI T F + L+ Q+ + GV Sbjct: 3 GDILSSLGNRAITRTHDILYGIGYVATVIKETVLFFRK--RRGEAGRVLVLQILFTGVEA 60 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+ L++ GA+I QG L QFG ++ + RE+G +LTA ++ RSG+A Sbjct: 61 LNVIALLALGIGALIIIQGVSLLPQFGQGDLVYPILIAVITRELGPILTAFIVTARSGTA 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I EIG+M ++ EI+A G+D + L+ PR I+++ LL + N ++G+ V Sbjct: 121 IATEIGTMVVSHEIEAYMAFGIDPISYLVVPRFLGAIVAVTLLNVYFNIFGLLGSFFVTS 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + I FA +F +I + L+K+ I +V GF V S + + Sbjct: 181 LIHPIQFAEYFHNLLLRLKPVDILSSLVKSATFGAVIALVGTYSGFQVERASTEIPQVAI 240 Query: 348 TCVVQSISIVIIIDSLFAIFYF 369 V + I+ D+L + Y+ Sbjct: 241 KAVGKGFVYCIVADALLTLVYY 262 >gi|296394453|ref|YP_003659337.1| hypothetical protein Srot_2050 [Segniliparus rotundus DSM 44985] gi|296181600|gb|ADG98506.1| protein of unknown function DUF140 [Segniliparus rotundus DSM 44985] Length = 290 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 3/279 (1%) Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKG 151 + F I + F LGLV+ S + + Sbjct: 1 MTAPARYYPPLVAPFVRGVKAIFNGPLNFFEQMGHVLTFLGLVLGAIPHTFRSYGRQIRD 60 Query: 152 FLLSLI--RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 L+ L VG + V+ ++ G VI +G LS F+ + + R Sbjct: 61 TLIDLTWGNGRIIVGGGTLSVLAVLGLSIGGVIGLEGYNALSIINIAPFTSFVSAYGMTR 120 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E G L A+ A ++G I AEIG+M+I EEIDA+ G+ + +++ R+ A + + Sbjct: 121 EFGPLAAALGFAAQAGCRITAEIGAMRIAEEIDALEATGIRSIPFVVTTRVIAGVAVILP 180 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 + +L S+V+ + + F ++ LIK A+ ++ Sbjct: 181 VYLLTLILGYEACSLVVNVLHSQSSGTYDYNFSHFLVPRDVVLSLIKTAVFIVAVVMIHG 240 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G+ +G + SI IV +++ +F+ Sbjct: 241 YQGYYASGGPEGVGLASGRAIRSSIVIVTVLNMFLTLFF 279 >gi|119717049|ref|YP_924014.1| hypothetical protein Noca_2825 [Nocardioides sp. JS614] gi|119537710|gb|ABL82327.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 279 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 104/256 (40%), Gaps = 10/256 (3%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VP 169 F G + + + + + + + ++ + V V Sbjct: 10 SFYRGRRDSLEQYGDQLLFYVKALSWTPRAIRRYPREIVNTLAEVTFGAGGLSLIAGTVG 69 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+ ++F G + QG LSQ G FS + + RE+ L++A+ +A G Sbjct: 70 VIAFLAFFAGTEVGIQGYASLSQIGVAKFSAFISAYFNTREVAPLVSAIALAATVGCGYT 129 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A +G+M+I+EEIDA+ MG+ + L++ R+ A +++ L ++A ++ + ++ Sbjct: 130 ARLGAMRISEEIDALEVMGIPSLPFLVTTRMVAAFVAVIPLYVVALSASYLSPRLITTLV 189 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y + F ++ K F+A A+ ++ G+ +G V Sbjct: 190 YGQSPGTYDHYFLQFLPPIDMLWSFFKLLFLAAAVILIHCYYGYTASGGPAGVGMAVGRA 249 Query: 350 VVQSISIVIIIDSLFA 365 + SI +++ D + Sbjct: 250 IRTSIVTIVVADFFLS 265 >gi|298208113|ref|YP_003716292.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus HTCC2559] gi|83850754|gb|EAP88622.1| hypothetical protein CA2559_07665 [Croceibacter atlanticus HTCC2559] Length = 233 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 2/230 (0%) Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAEIFSI 200 K +++++ + +S + +V ISF GAV++ Q A L+ + Sbjct: 5 VFGRMTKQSVLRGLILKEIDDLIMSSLGIVTFISFFIGAVVSIQTALNLNNPLIPKELIG 64 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 + E +V++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ P+I Sbjct: 65 FAARQSIILEFAPTFISVIMAGKVGSYITSSIGTMRVTEQIDALEVMGINSLNYLVLPKI 124 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A++I P L +A F I+GA + + + F S ++ +K Sbjct: 125 VAMMI-YPFLIGIAMFIGILGAYMAGVYGGFLGSSEFLSGLQDDFISFHLVYAFLKTFLF 183 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + V G+ + + +G+ T V + ++II + + + Sbjct: 184 AFILATVPAYHGYYMKGGALEVGQASTQSFVWTSVVIIITNYVLTQVLLS 233 >gi|326333403|ref|ZP_08199649.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325948799|gb|EGD40893.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 261 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 115/239 (48%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + + + ++ I+Q +++ + L++ GAVIA Q + Q Sbjct: 17 GSLFAFGLDVGRAVFRRPFQFREFIQQAWFIASVTIVPTALVAIPFGAVIALQVGGLVQQ 76 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 FGA+ F + +++ + TA+++AG GSAI A++G+ KI EE+DA+ +G+D + Sbjct: 77 FGAQSFVGSAAVLAVVQQAAPIATALLVAGAGGSAIAADLGARKIREELDAMMVLGIDPI 136 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 + L+ PR+ A ++ L L + ++G + + + F + A +A+++ Sbjct: 137 QRLVVPRVLAAMMIAVFLNGLVSIVGVMGGYVFNVIIQGGTPGAYLASFTALAQMADLWQ 196 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 GL KA IVA +G G +G V VV + ++ I++ + + + I Sbjct: 197 GLAKALVFGLIAAIVAAYKGMNAGGGPKGVGDAVNESVVITFLLLFIVNFVMSAIFLQI 255 >gi|42525131|ref|NP_970511.1| ABC-type organic solvent resistance transporter, permease protein. [Bdellovibrio bacteriovorus HD100] gi|39577342|emb|CAE81165.1| ABC-type organic solvent resistance transporter, permease protein [Bdellovibrio bacteriovorus HD100] Length = 259 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 112/243 (46%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 S +G + + K + Q++ V V P + F GA++ Sbjct: 4 ITSLLDQMGATLLFLQRILRTMIFKKLKTHEIFEQIWKVTVDSFPTTAMAGFFVGAIMTV 63 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q A Q+ +FGA + L + RE+G LL A M++G+ G+ AE+G+MK+ E+IDA+ Sbjct: 64 QFAMQVKEFGALGYLGALATSATFREVGPLLIAFMLSGKVGAFTSAELGTMKVTEQIDAV 123 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R +G D ++ +I PR +I+S L ++ G ++ + + + + Sbjct: 124 RCLGADPIQEIIVPRFVGIIVSSFFLLAAGLMMSVFGGMLLGELFAGVNYEEYLRHVPLI 183 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + +I +GL+K A + + +G+A + +G+ V V ++ ++++D + Sbjct: 184 VSPVSILSGLVKCGTFAVVLATICTYQGYATTGGAKGVGRAVVATAVTTMICIVVMDWMT 243 Query: 365 AIF 367 + Sbjct: 244 SFI 246 >gi|313204340|ref|YP_004042997.1| hypothetical protein Palpr_1873 [Paludibacter propionicigenes WB4] gi|312443656|gb|ADQ80012.1| protein of unknown function DUF140 [Paludibacter propionicigenes WB4] Length = 246 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 S + G + A ++K F +++ +G+ +P+V +IS G ++ Q Sbjct: 1 MSLLNNTGKYVLLMKRVFAKPDRWKMFFRQFPKELEKLGLQSLPIVAIISIFIGFIMTMQ 60 Query: 186 GAFQLSQFGAEIFS-IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + +++ + L E + +++AG+ GS I +EIG+M+I E+IDA+ Sbjct: 61 TKLNTANPLLPVYTTGLVTRDTLLLEFSSTILCLILAGKVGSNIASEIGTMRITEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ LI P+I A II +P L + + I G V + + + Sbjct: 121 EIMGVNSANYLILPKIAAFIIMMPFLVVFSMALGIFGGYFVGVLTSIMTTGDYLTGIQYA 180 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +F LIK+ A I VA G+ + +GK T VV +++ + L Sbjct: 181 FVPFYVFYSLIKSMIFAFIISSVAAYYGYYAYGGALDVGKASTNAVVNGSVLILFFNILI 240 Query: 365 AIF 367 Sbjct: 241 TKI 243 >gi|302525040|ref|ZP_07277382.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302433935|gb|EFL05751.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 272 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 104/259 (40%), Gaps = 10/259 (3%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG--------- 167 +++ I+ LG I + + +L ++R + V Sbjct: 1 MLEAIDRRLGFLDTLGDQILFFLRALGWVPRAVRRYLREIVRLLAEVSFGSGALAVIGGT 60 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G Sbjct: 61 IGVMVGMTVATGTVVGLQGYSALNQVGTSAFAGFISAYFNTREIAPLVAGLALSATVGCG 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ MG+ V L++ R+ A I++ L + S+ + + V Sbjct: 121 FTAQLGAMRISEEIDALEVMGIPSVPYLVTTRVIAGFIAVIPLYAVGLLSSYLASRQVTV 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + + F ++ K + + + GF +G V Sbjct: 181 WGFGQSAGTYDHYFLLFLPPGDVLWSFGKVLIFSVVVVLAHCYYGFRASGGPAGVGVAVG 240 Query: 348 TCVVQSISIVIIIDSLFAI 366 V +I + ++D ++ Sbjct: 241 RAVRTAIVAISVLDFFLSL 259 >gi|300784333|ref|YP_003764624.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793847|gb|ADJ44222.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 262 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 116/245 (47%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + + + E + +K I+Q ++ + L++ GAVIA Q Sbjct: 12 AALTQVGRLATLSWEVLRAIFKRPFQAREWIQQCWFFASVTILPTALVAIPFGAVIALQL 71 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ ++ +++ L+TA+++AG GSA+ A+IG+ KI EEIDA+ Sbjct: 72 GSLTAQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 131 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ ++ LI PR+ A ++ LL L + ++G + + F++ A Sbjct: 132 LGVNPIQRLIVPRVLAAMVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 191 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +++ IKA G+VA G +G V VV + ++ +I+ + Sbjct: 192 VPDLWVSEIKALLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 251 Query: 367 FYFAI 371 Y I Sbjct: 252 IYLRI 256 >gi|269128028|ref|YP_003301398.1| hypothetical protein Tcur_3829 [Thermomonospora curvata DSM 43183] gi|268312986|gb|ACY99360.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 288 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 6/257 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILIS 175 ++ + LG V+ + K+ LL I + +G + VV ++ Sbjct: 25 LSTALDMPVFLGRVLYHLVVDIVLRRKYGKMLLRQISDITVGVGALVIGGGMIFVVATMA 84 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TGA++ QG L + GAE FS + S +RE+ ++ V + + GSA AEIG+M Sbjct: 85 MATGAMVGMQGYPSLERIGAEAFSGVMASFANVREVTPIIAGVALIAQVGSAFTAEIGAM 144 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I+EEIDA+ MG++ + L+ R+ A +I+L L +LA F++ ++ +Y+ + Sbjct: 145 RISEEIDALEVMGINSLTFLVCTRVAAGVIALLPLYLLALFASFFATRLITVQYFGLSPG 204 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ F+ ++ IK A + + G+ +G + +S Sbjct: 205 IYDYYFNLYLPPIDVLYSGIKVAVFAFVVMFIHCYRGYYATGGPVGVGVAAGRAIRESSV 264 Query: 356 IVIIIDSLFAIFYFAIG 372 +I+I+ L + ++ G Sbjct: 265 AIIVINLLLSYIFWGHG 281 >gi|163754162|ref|ZP_02161285.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1] gi|161326376|gb|EDP97702.1| hypothetical protein KAOT1_21107 [Kordia algicida OT-1] Length = 233 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 2/233 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + K+ + + + + + + +V ISF G V++ Q A ++ Sbjct: 1 MLQSVFSKMTKWSMLRKLIFKDIDDLIIGSMGIVCFISFFVGGVVSIQTALNMNNPLIPK 60 Query: 198 F-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 + + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ Sbjct: 61 YLVGFATRQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGVNSLNYLV 120 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 P+I AL + P + +A F I G + A F ++ IK Sbjct: 121 FPKIIALSL-YPFVITIAMFLGIFGGWLASIYGGFSTSADFIQGLQIEFIPFHVTYAFIK 179 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 A + + G+ + + +GK TT V + ++I+I+ L Sbjct: 180 TFVFAFVLATIPSFYGYYMKGGALEVGKASTTSFVWTSVVIILINYLITQLLL 232 >gi|326333402|ref|ZP_08199648.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325948798|gb|EGD40892.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 275 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 103/248 (41%), Gaps = 10/248 (4%) Query: 129 AHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VPVVILISFVT 178 LG + + + + + ++R + V + V V++ ++F T Sbjct: 15 LDHLGDELGFYLRAVSWFPRTLRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMTFFT 74 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA + G L Q G FS + + REI L+ + +A G A++G+M+I+ Sbjct: 75 GAQVGLSGYTALDQLGTSAFSGFVSAYFNTREIAPLVAGIALAATVGCGFTAQLGAMRIS 134 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EE+DA+ M + + L++ R+ +I++ L ++ S+ + + +Y + Sbjct: 135 EEVDALEVMAIPSLPFLVTTRMIGGLIAIVPLYVVGLLSSYVATRFTVILFYGQSAGTYD 194 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F++ ++ K A + ++ G+ +G V V SI V Sbjct: 195 HYFNTFLPPVDVLWSFGKVLIFAVVVILIHCYHGYNASGGPAGVGVAVGKAVRTSIVAVS 254 Query: 359 IIDSLFAI 366 ++D + ++ Sbjct: 255 VLDLMLSM 262 >gi|302523958|ref|ZP_07276300.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302432853|gb|EFL04669.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 262 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 109/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + + + ++ I+Q ++V + L++ GAVI+ Q Sbjct: 12 GMLRETGNLFALGLDIVRGIFQRPFQFREFIQQAWFVASVTILPTALVAIPFGAVISLQF 71 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 Q GA+ ++ + +++ L+TA+++AG GSA+ A+IG+ I EEIDA+ Sbjct: 72 GALARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIDAMEV 131 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V+ LI PR A+++ LL + + ++G + S F + A Sbjct: 132 LGVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLSSFSALAQ 191 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +++ G IKA +VA G +G V VV + ++ +++ + + Sbjct: 192 LPDLWVGEIKALIFGFIAAVVAAYRGLHPSGGPKGVGDAVNQSVVITFLLLFVVNFVITL 251 Query: 367 FYFAI 371 Y + Sbjct: 252 IYLQL 256 >gi|326333296|ref|ZP_08199543.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325948940|gb|EGD41033.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 284 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 96/248 (38%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 N G + + + Q +++ +L++ VI Sbjct: 32 NALFKALASFGDFYAFVVSVFRKGFTHSFQFREFVSQAWFITTVSFWPALLVAIPFCVVI 91 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q L + GA + ++ +REIG +++ +++AG +AI A++GS KI EEID Sbjct: 92 IFQVNQLLIEIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGATAICADLGSRKIREEID 151 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ T+G+D + L+ PR+ A + L L ++G ++ + Sbjct: 152 AMTTLGIDPIHRLVVPRVAASTLVGIALNGLVTVVGLVGGYFFSVVLQGATPGLYLNDLT 211 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L++ KA G+ A G +G+ V VV + ++ +S Sbjct: 212 LLVGLSDFIAAEAKAAIFGLLAGLTACYLGLNAKGGPKGVGEAVNQTVVFAFMLLFAANS 271 Query: 363 LFAIFYFA 370 + + + Sbjct: 272 VISTLFLQ 279 >gi|326382982|ref|ZP_08204671.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL B-59395] gi|326198118|gb|EGD55303.1| hypothetical protein SCNU_08596 [Gordonia neofelifaecis NRRL B-59395] Length = 286 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 105/251 (41%), Gaps = 7/251 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173 +K ++ + Q ++ + + + L + G V V++L Sbjct: 23 LKLLDGAGEQMSFYARTLAWIPKTLVHYT--REVMRLLAEVAFGSGGLAVIGGTVGVMVL 80 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S TG V+ QG L Q G++ + L + + RE+ L+ + ++ G A++G Sbjct: 81 MSGFTGVVVGMQGYAALDQIGSQALTGFLSAYVNTREVAPLVAGLALSATVGCGFTAQLG 140 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I+EEIDA+ M + + L+S R+ A I++ L +L +A + + +V + Sbjct: 141 AMRISEEIDALEVMAVPSIPFLVSSRVIAGFIAVIPLYVLGLMAAYLASRVVNTVFNGQS 200 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ ++ K A I ++ G+ +G V V + Sbjct: 201 TGSYDHYFNLFLPPVDVLWSFGKVLIFAFVIILIHCYYGYFASGGPAGVGVAVGHAVRTA 260 Query: 354 ISIVIIIDSLF 364 + ++ ++D Sbjct: 261 LVLIAVMDFFL 271 >gi|294086102|ref|YP_003552862.1| hypothetical protein SAR116_2535 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665677|gb|ADE40778.1| Protein of unknown function DUF140 [Candidatus Puniceispirillum marinum IMCC1322] Length = 266 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 2/258 (0%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 IG ++ F+ S + I I + L ++ + G+ +PV Sbjct: 11 LTRIGMPVLNFVAFSGFISQIFATAILLLCSGFRRGQPVR--LRHVVSDIRSSGIDALPV 68 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 VIL++ G +++ QG L FGAE +++ RE L+T +++AGRSGS + + Sbjct: 69 VILMAATIGIMLSIQGVHSLRIFGAESQVTFGLALSIPREFAPLITGIIVAGRSGSQLTS 128 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 +GSM++N E+DA++ MG+ +R +++P + AL+ +LP+L +AN SA AS+ I Sbjct: 129 RVGSMQLNGELDALKVMGISPIRFVVAPALVALLFALPILVAIANVSAFWTASLYIDAVL 188 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 I A +++ + T+ ++ G KA A I ++ + +G V ++ LG T+ V Sbjct: 189 GIAPAAYWADILAVVTITDLIHGFGKAIIFAVLIALIGICKGLRVSGGADRLGAATTSSV 248 Query: 351 VQSISIVIIIDSLFAIFY 368 V I+ +I D++FA+ Sbjct: 249 VSCIAAIIAADAMFALIL 266 >gi|168699832|ref|ZP_02732109.1| probable permease of ABC transporter [Gemmata obscuriglobus UQM 2246] Length = 276 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 115/236 (48%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G A + +R VG + V VV + G V+A Q Q Sbjct: 24 FGDWWLFAFRSLAGIFGRAFRAGEFLRVAVEVGTNSVGVVAITGTFIGMVLAVQAYGQFH 83 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 G E ++ I +RE+G +L AVM+AGR GSA+ AE+ +M++ E++DA+ +G+D Sbjct: 84 TIGMETSLGAVIHISVVRELGPVLAAVMLAGRVGSAMAAELATMRVTEQLDALACLGVDP 143 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A + LPLLT+LA+ + G+S++ Y I ++ L ++ Sbjct: 144 VKYLVGPRLLACFLLLPLLTVLADVMGLFGSSLICLHVYHIDSHHYWRHTREFVKLWDVS 203 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 GL+KA + ++A GF + +G+ T V + ++IID L A+ Sbjct: 204 VGLMKAFVFGAVLSLIACHRGFNSKAGAAGVGRAATEAFVIAFVAILIIDFLLAML 259 >gi|302525560|ref|ZP_07277902.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302434455|gb|EFL06271.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 267 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 116/245 (47%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + + + E + +K I+Q ++ + L++ GAVIA Q Sbjct: 17 AALTQVGRLATLSWEVLRAIFKRPFQFREWIQQCWFFASVTILPTALVAIPFGAVIALQL 76 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ ++ +++ L+TA+++AG GSA+ A+IG+ KI EEIDA+ Sbjct: 77 GSLTTQIGAQSFTGAASALAIVQQASPLITALLVAGAGGSAVCADIGARKIREEIDAMEV 136 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G++ ++ ++ PR+ A I+ LL L + ++G + + F++ A Sbjct: 137 LGVNPIQRIVVPRVLAAIVVSVLLNGLVSVVGVLGGYFFNVVLQGGTPGAYLASFNALAQ 196 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +++ IKA G+VA G +G V VV + ++ +I+ + Sbjct: 197 VPDLWISEIKAFLYGFVAGVVAAFRGLNPAGGPKGVGDAVNQAVVITFLLLFLINVVLTA 256 Query: 367 FYFAI 371 Y + Sbjct: 257 VYLKV 261 >gi|325003316|ref|ZP_08124428.1| putative ABC-transporter integral membrane protein [Pseudonocardia sp. P1] Length = 259 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 105/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G I E S + L LI Q ++V L + GA IA Sbjct: 7 VTRVLSPVGKFIGLGAEIGKQSLRRPFQLRELIEQTWFVTKVSALPTALFTIPFGATIAL 66 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QFGA+ + + +++ ++TA++I+G GSA+ A++G+ I EEI A+ Sbjct: 67 LLGELTRQFGAQSQTGAGAVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAM 126 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+ ++ L+ PR+ A+ I+ +L LA + G + S F + Sbjct: 127 EVLGISPIQRLVVPRVLAMGITAVVLNGLATCVGVSGGYFFNVIIQGGSPGAYISSFSAI 186 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A +++I IKA G+VA G + +G V VV S +V +I+ + Sbjct: 187 AQVSDIVVSEIKAFLFGIVAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLVL 246 Query: 365 AIFYFAI 371 Y + Sbjct: 247 TALYLEL 253 >gi|300782534|ref|YP_003762825.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|41581798|gb|AAS07742.1| putative ABC-transporter permease [Amycolatopsis mediterranei S699] gi|299792048|gb|ADJ42423.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 278 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG------- 167 + + +N LG +S G + + + + ++R + V Sbjct: 5 QGAKRVVNRPLQTLDTLGDQMSFYGRALLWTPRTLRRYTKEVLRLLAEVSFGSGSLAVIG 64 Query: 168 --VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V++ ++ TG ++ QG L+ G F+ L + REI L+ + ++ G Sbjct: 65 GTVGVMVGLTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVG 124 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+I+EEIDA+ MG+ + L++ RI A +++ L I+ S+ + + +V Sbjct: 125 AGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYIIGLLSSYLASRLV 184 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + Y + F ++ IK + I + G+ +G Sbjct: 185 VIYIYHQSAGTYDHYFDLFLPPQDVLYSFIKVLLFSVLIILSHCYFGYRATGGPAGVGVA 244 Query: 346 VTTCVVQSISIVIIIDSLF 364 V V SI V I++ Sbjct: 245 VGKAVRLSIVTVSIMNFFI 263 >gi|282897686|ref|ZP_06305685.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9] gi|281197365|gb|EFA72262.1| Protein of unknown function DUF140 [Raphidiopsis brookii D9] Length = 241 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 108/239 (45%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 G+ + K + ++ VG + V+L+S G + Q A +L +FG Sbjct: 3 TALLFGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELVRFG 62 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A ++ RE+ LLTA +IAG++GSA AEIG+M++ E+IDA+ + D + Sbjct: 63 AVDNLGGAFAVAFCRELAPLLTASVIAGQAGSAFAAEIGAMQVTEQIDALYLLKTDPIDY 122 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A + +P++ I A + G ++Y I F T ++ + Sbjct: 123 LVLPRVIACGLMMPVMMIFALIIGVSGGIFAGLEFYQIQPENFLESVRDFLTPGDMMMII 182 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 IK + + G + +G+ TT VV + ++ I D L A+ +GI Sbjct: 183 IKGVIFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLALPGITVGI 241 >gi|145352678|ref|XP_001420665.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus lucimarinus CCE9901] gi|144580900|gb|ABO98958.1| ABC(membrane) family transporter: toluene tolerance [Ostreococcus lucimarinus CCE9901] Length = 308 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 110/239 (46%), Gaps = 2/239 (0%) Query: 134 LVISNTGEFCASSYK--FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 G + + ++Q+ VG + V +L S G V Q + + Sbjct: 69 ATGLLFGSVLYRCARQPRRVNWEQTLQQIARVGPQTLGVSLLTSSFVGMVFTIQFCKEFA 128 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + G + L+ + RE+ ++ A+++ GR GS+I AE+G+M++ E++D + +G D Sbjct: 129 KVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTEQVDQLTVLGTDP 188 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A +SLP+L+I++ A+ + ++ Y + V ++I Sbjct: 189 VDYLVIPRVIACAVSLPILSIISFAQALGASILLADLRYGVSPNVIIDSAAKYLEPSDIG 248 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 K+ I +++ G + +G+ T VV S++ + ++D + ++ +F Sbjct: 249 IMTAKSIAFGAVIAVISCGWGTTTTGGAKGVGESTTASVVISLTAIFVVDFVLSLVFFQ 307 >gi|118619254|ref|YP_907586.1| membrane protein YrbE4A [Mycobacterium ulcerans Agy99] gi|118571364|gb|ABL06115.1| conserved membrane protein YrbE4A [Mycobacterium ulcerans Agy99] Length = 279 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 1/255 (0%) Query: 113 HIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +G+ + I A +G + + ++++ + Q + V + + Sbjct: 19 RLGRGT-ELIQQLAVPARAVGGFFEMSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTL 77 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L+S ++A L + GA S + + ++G ++T +++AG +AI A++ Sbjct: 78 LVSIPFTVLVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADL 137 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+ I EEIDA+R +G+D ++ L+ PR+ A + LL L + G + Sbjct: 138 GARTIREEIDAMRVLGIDPIQRLVVPRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGV 197 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F + L + IKA G+V G V +G V VV Sbjct: 198 NPGAFINGLTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVY 257 Query: 353 SISIVIIIDSLFAIF 367 + + +I+ + Sbjct: 258 AFICLFVINVVMTAI 272 >gi|319950491|ref|ZP_08024404.1| putative YrbE family protein [Dietzia cinnamea P4] gi|319435850|gb|EFV91057.1| putative YrbE family protein [Dietzia cinnamea P4] Length = 262 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 106/252 (42%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + G V + ++ I Q +++ + L++ G Sbjct: 5 DVGGGFRTAVGGAGEVFRLFLDVLRGVFRRPFQFREFIEQSWFIASVTILPSALVAIPFG 64 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 AV+A Q + Q GAE F+ + +++ L+T+++IAG +GSA+ A++G+ I E Sbjct: 65 AVVAMQTGSLVQQLGAEAFTGATGVLAVVQQGAPLVTSLLIAGAAGSAVAADLGARTIRE 124 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+R +G+D ++ L+ PR+ +++ LL L + I G + + Sbjct: 125 ELDAMRVLGIDPIQRLVVPRVLGMMLVAVLLNGLVSIVGISGGYVFNIMLQGGTPGAYLM 184 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F + A L + IKA G+VA G +G V VV + ++ Sbjct: 185 SFGALAQLPDFIMSSIKALIFGLIAGVVASYCGMNPKGGPKGVGDAVNLGVVLTFLLLFF 244 Query: 360 IDSLFAIFYFAI 371 + + Y I Sbjct: 245 ANLILTAMYLQI 256 >gi|302523959|ref|ZP_07276301.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] gi|302432854|gb|EFL04670.1| ABC transporter integral membrane protein [Streptomyces sp. AA4] Length = 278 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 7/251 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173 ++ ++ Q G + T K L L + G V V++ Sbjct: 15 LETLDTLGDQMSFYGRALLWTPRTLRRYT--KEVLRLLAEVSFGSGSLAVIGGTVGVMVG 72 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TG ++ QG L+ G F+ L + REI L+ + ++ G+ A++G Sbjct: 73 LTLFTGVLVGLQGYSALNSIGTSAFTGFLTAFFNTREIAPLVAGLALSATVGAGFTAQLG 132 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I+EEIDA+ MG+ + L++ RI A +++ L ++ S+ + + +V+ Y Sbjct: 133 AMRISEEIDALEVMGVPSLPYLVTTRIIAGFVAVIPLYVIGLLSSYLASRLVVIYIYGQS 192 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F ++ IK + I + G+ +G V V S Sbjct: 193 AGTYDHYFDLFLPPQDVLYSFIKVLIFSVLIILSHCYFGYRASGGPAGVGVAVGRAVRLS 252 Query: 354 ISIVIIIDSLF 364 I V +++ Sbjct: 253 IVTVSVVNFFI 263 >gi|282900961|ref|ZP_06308894.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] gi|281194052|gb|EFA69016.1| protein of unknown function DUF140 [Cylindrospermopsis raciborskii CS-505] Length = 259 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 104/232 (44%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 G+ + K + ++ VG + V+L+S G + Q A +L +FG Sbjct: 21 TALLFGQISLHIIQGKTYYRKILDHALKVGPGSLSPVLLVSGFAGMIFTIQTARELIRFG 80 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A ++ RE+ +LTA +IAG+ GSA AEIG+M++ E+IDA+ + D + Sbjct: 81 AVDNLGGAFAVAFCRELAPILTASVIAGQVGSAFAAEIGAMQVTEQIDALYLLKTDPIDY 140 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A + +P++ I A + G ++Y + F T ++ + Sbjct: 141 LVLPRVIACGLMMPVMMIFALIMGVSGGIFAGLQFYQVQPENFLESVRDFLTPGDMMMII 200 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +K + + G + +G+ TT VV + ++ I D L A+ Sbjct: 201 VKGVIFGIIVAVNGCSWGLTTRGGAKEVGESATTAVVTTWVVLFITDFLLAL 252 >gi|324999480|ref|ZP_08120592.1| hypothetical protein PseP1_11966 [Pseudonocardia sp. P1] Length = 246 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 97/242 (40%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + + +K ++Q ++V + IL+ A++ Q L Sbjct: 1 MGSFFAFVADTFVAMFKRPFHWREFVQQTWFVASVSLGPAILLGIPFVALVTFQFNLILV 60 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S + +IG + T +IAG S +AI A+IG+ KI EE+DA+ +G+D Sbjct: 61 EIGAIDLSGSGSGFATVTQIGPVATTFIIAGASSTAICADIGARKIREELDAMEVLGIDV 120 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V L+ PR+ A ++ LL + + G + + ++ Sbjct: 121 VHRLVVPRVLATAVNAFLLNGVMILIGLTGGYVFGVYLQGASPGQYVDSLKLLVGFPDLV 180 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 G I+A ++ G +G V VV + + I+ L +++ Sbjct: 181 HGEIRAVVFGMVGALIGCYRGMTCAAGPRGVGNAVNETVVYTFLALFPINILLTQIPYSL 240 Query: 372 GI 373 GI Sbjct: 241 GI 242 >gi|311744834|ref|ZP_07718630.1| ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] gi|311311951|gb|EFQ81872.1| ABC superfamily ATP binding cassette transporter permease protein [Aeromicrobium marinum DSM 15272] Length = 258 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 117/250 (46%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + A G + + + + +K + + Q Y+ + L++ GAV Sbjct: 3 VSQIAAPARAAGGLFAFMLDVFMALFKRPFQMREFLLQAYFTIRVTIVPTALVAIPFGAV 62 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 IA Q + QFGA+ F+ + +R G + TA++IAG +GSAI A+ G+ KI EE+ Sbjct: 63 IALQVGGLIKQFGAQSFTGSAAVLAVVRNAGPIATALLIAGAAGSAIAADFGARKIREEL 122 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ +G+D ++ L+ PR+ A+++ L L F + G + D + + F Sbjct: 123 DAMMVLGIDPIQRLVVPRVLAVMLIAVFLNGLVTFVGVAGGYVFNVLLQDGTPGAYLASF 182 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + A L +I G++KA IVA +G +G V VV + ++ ++ Sbjct: 183 TALAQLPDILQGMVKAVIFGFLAAIVASYKGMNAKGGPKGVGDAVNEAVVITFVLLFAVN 242 Query: 362 SLFAIFYFAI 371 + + Y + Sbjct: 243 FVVSALYIQL 252 >gi|254488593|ref|ZP_05101798.1| membrane protein [Roseobacter sp. GAI101] gi|214045462|gb|EEB86100.1| membrane protein [Roseobacter sp. GAI101] Length = 254 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 109/254 (42%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + +G V ++ + + +G +PVV L + Sbjct: 1 MAALGRLTLAALATIGSVTLFACSALVHIFRPPFYAGQFGTALVQIGWLSLPVVGLTALF 60 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG + Q ++F AE +++I +RE+G +L +M+A R +AI AEI +MK+ Sbjct: 61 TGGALVMQIYAGGARFNAEAVVPQIVAIGMVRELGPVLVGLMVAARVTAAIAAEIATMKV 120 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++DA+ T+ D +R L PR+ A ++++PLL + + I+G V + Sbjct: 121 TEQLDALITLSTDPMRYLTVPRVLAALLAVPLLVAVGDIIGIMGGYFVATGSLGFSSGAY 180 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 + +I + LIK ++ G G + +G+ + V + ++ Sbjct: 181 LRNTVNFLEPLDIASSLIKGTAFGLIAALMGCYFGLNAGRGARGVGRATKSAVEAAAILI 240 Query: 358 IIIDSLFAIFYFAI 371 + + + FA+ Sbjct: 241 LAANFILTAVIFAL 254 >gi|289806792|ref|ZP_06537421.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 212 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 1/211 (0%) Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y VGV + ++I+ G V+ QG L+ + AE L+++ LRE+G ++ A++ Sbjct: 1 YNVGVLSMLIIIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLF 60 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISPR WA +ISLPLLTI+ I Sbjct: 61 AGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIW 120 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 G S+V + I F+S + ++ LIK+ A + +A+ G+ S Sbjct: 121 GGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTS 180 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + T VV + V+ +D + F Sbjct: 181 AGISRATTRTVVHASLAVLGLDFVLTALMFG 211 >gi|319950492|ref|ZP_08024405.1| putative YrbE family protein [Dietzia cinnamea P4] gi|319435851|gb|EFV91058.1| putative YrbE family protein [Dietzia cinnamea P4] Length = 285 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 7/253 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPV 170 + V + Q I + L + + VG + V Sbjct: 19 RGPVNSFDSLGDQLAFHLRAIRWIPQTIVHYRH--EVLRLIAEVTFGVGTLAVLGGTIGV 76 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++++S TG V+ QG L Q G+ + + L + + RE+ ++ ++ ++ G A Sbjct: 77 IVMMSGFTGVVVGLQGYAALDQIGSSVLTGFLSAYVNTREVAPVVASLALSATVGCGFTA 136 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EEIDA+ M + V L++ R+ A I++ L ++ S+ + V Sbjct: 137 QLGAMRISEEIDALEVMAIPSVPYLVTTRVIAGFIAVIPLYVVGLLSSYLATRGVNTMIQ 196 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 F FH ++ IK A + ++ G+ +G V V Sbjct: 197 GQSTGSFDHYFHLFLPPEDVIYSFIKVIIFAFVLVMIHCYYGYTASGGPAGVGVAVGRAV 256 Query: 351 VQSISIVIIIDSL 363 +I +V I++ Sbjct: 257 RTTIVVVAILNFF 269 >gi|119714949|ref|YP_921914.1| hypothetical protein Noca_0702 [Nocardioides sp. JS614] gi|119535610|gb|ABL80227.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 275 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 107/251 (42%), Gaps = 10/251 (3%) Query: 126 CSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VPVVILIS 175 LG ++ + A + + + + ++R + V + V V++ ++ Sbjct: 12 LKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMT 71 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 F TGA + G L Q G F+ + + REI L++ + +A G A++GSM Sbjct: 72 FFTGAQVGLSGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCGFTAQLGSM 131 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I+EE+DA+ M + + L++ RI +I++ L ++ ++ + + +++ Sbjct: 132 RISEEVDALEVMAIPSLPFLVTTRIVGGLIAIIPLYVVGLLASYFATRLTVTQFFGQSAG 191 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + F+S ++ K A + ++ G+ +G V V SI Sbjct: 192 TYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGVAVGRAVRTSIV 251 Query: 356 IVIIIDSLFAI 366 + +ID ++ Sbjct: 252 AINVIDLFLSM 262 >gi|331699196|ref|YP_004335435.1| hypothetical protein Psed_5449 [Pseudonocardia dioxanivorans CB1190] gi|326953885|gb|AEA27582.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans CB1190] Length = 259 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 106/247 (42%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +G + + + +++ L I Q ++V L + GA IA Sbjct: 7 VTRALTPVGQLFALGVDIVRMTFRRPFQLGEYIEQTWFVTKVSALPTALFTIPFGATIAL 66 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A QFGA+ + + +++ ++TA++I+G GSA+ A++G+ I EEI A+ Sbjct: 67 LLAELTRQFGAQSQTGAGSVLAIVQQAAPIVTALLISGAGGSAVCADLGARTIREEIAAM 126 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 +G+ ++ L+ PR+ A+ + +L LA + G + + F + Sbjct: 127 EVLGISPIQRLVVPRVLAMATTALVLNGLATVVGVAGGYFFNVVVQGGTPGAYIASFSAI 186 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A +++I +KA G+VA G + +G V VV S +V +I+ + Sbjct: 187 AQVSDIVVSEVKAALFGFTAGVVAAYRGLNPPPGAKGVGDAVNQAVVISFVLVFLINLIL 246 Query: 365 AIFYFAI 371 Y I Sbjct: 247 TALYLQI 253 >gi|296179481|gb|ADG96486.1| SupB [Gordonia cholesterolivorans] Length = 287 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 3/249 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFL---LSLIRQMYYVGVSGVPVVILISFVTGAV 181 Q G + + L +SL V V ++ ++ G Sbjct: 29 LGRQLAFYGASLRAVPRAFTHYRRETIRLLAEVSLGAGALAVIGGTVVIIGFLTAAAGYE 88 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 + QQG+ L + G E S + + RE ++ V + GS A++G+M+++EEI Sbjct: 89 VGQQGSSSLGRVGVEAMSGFISAFFNTREAIPVIAGVALTATVGSGFTAQLGAMRVSEEI 148 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ M + + L+S RI A ++++ L +A F+ V D + F Sbjct: 149 DALEVMSVQSLPYLVSTRIAAGLVAIIPLYAIALFTGYAATKFVSVFLSDQSPGTYDHYF 208 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 +++ L+K MA A+ V G+ +G V V S+ I++++D Sbjct: 209 QLFLQPSDVAISLLKVIVMAVAVMAVHCYYGYNASGGPAGVGVAVGHAVRTSLIIIMVVD 268 Query: 362 SLFAIFYFA 370 + I + Sbjct: 269 FVVGIALYG 277 >gi|300783703|ref|YP_003763994.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793217|gb|ADJ43592.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 264 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 55/228 (24%), Positives = 100/228 (43%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + G + + +++ LI+Q +++ + L+S GAVIA Sbjct: 14 AALRQTGRLYGLGLDVVRLTFRRPFQARELIQQFWFIASVSILPTALVSIPFGAVIALHI 73 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ + +++ ++TA++IAG GSA+ A++GS I EEIDA+ Sbjct: 74 GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 133 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ V+ LI PR+ A + L + + ++G + + F + A Sbjct: 134 LGVSPVQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQHGTPGAYLASFSALAQ 193 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 L +++ IKA G+VA G +G V VV + Sbjct: 194 LPDLWISEIKALIFGFVAGVVASYRGLNPKGGPKGVGDAVNQSVVITF 241 >gi|262196626|ref|YP_003267835.1| hypothetical protein Hoch_3440 [Haliangium ochraceum DSM 14365] gi|262079973|gb|ACY15942.1| protein of unknown function DUF140 [Haliangium ochraceum DSM 14365] Length = 268 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 3/225 (1%) Query: 148 KFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQF-GAEIFSIDLMSIL 206 + + RQMY +G + + G V QGA QL + G S L Sbjct: 41 RRGWRRREVARQMYDIGNRSFVFIAVTMGFFGMVFIYQGALQLDRIVGDVSLLGREFSKL 100 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 ++++G LTA+M+A R G+ I AE+GSM + E++DA+R G+ + L++PR+ A ++ Sbjct: 101 LVKDLGPSLTAMMLATRVGAGIAAELGSMTVTEQVDALRMSGVRPIDYLVAPRLLAALVM 160 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 + L I A + W Y+D+ +F ++ GL+KA A I + Sbjct: 161 VTALAIFGTAVAFAAGGLTAWAYFDLNPRAYFDLSQ--VEFGHLGLGLVKAVVYAANIPL 218 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +A G S +G+ T V+ S V+ D ++ + Sbjct: 219 IAAFCGLRAHGGSAGVGRATTAAVIGSSFAVLSWDLALSLVALQL 263 >gi|228473179|ref|ZP_04057934.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] gi|228275329|gb|EEK14121.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] Length = 245 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 2/229 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G E K+ +++++ + + ++ IS GAVIA Q A Sbjct: 4 LEAIGRYFLMLYEIFRKRTKWAMMKRLIMKEIDDLMYGSLGIIAFISLFVGAVIAIQMAL 63 Query: 189 QLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 + + + E T++++AG+ GS I + IG+M++ E+IDA+ M Sbjct: 64 NIDNPLIPKSLIGFATRQTIVLEFAPTFTSIIVAGKVGSFITSSIGTMRVTEQIDALDIM 123 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ + LI P+I AL++ P +A I G I + A F Sbjct: 124 GVNSLNYLIFPKIIALLL-YPFAITMAMALGIYGGYIAATVGHYATSAEFLEGLKLQFRA 182 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 +I LIK+ A + + G+ + + +GK T V + Sbjct: 183 FDITYALIKSVIFAFVLATIPAYHGYYMKGGALDVGKASTISFVWTSVA 231 >gi|54027082|ref|YP_121324.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018590|dbj|BAD59960.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 288 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 101/256 (39%), Gaps = 7/256 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPV 170 + + ++ + Q I+ K + L + G + V Sbjct: 22 RAPLNVVDRAGEQMSFYARAIAWIPRAAVHYR--KEVMRLLAEVTFGSGALAVIGGTIGV 79 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++ +S G V+ QG L G+ + + L + + REI L+ A+ ++ G A Sbjct: 80 IVFMSGSVGVVVGLQGFKALDAIGSSVLTGFLTAYINTREIAPLVAALALSATVGCGFTA 139 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EEIDA+ M + V L++ R+ A +++ L I+ A + + + Sbjct: 140 QLGAMRISEEIDALEVMAVPGVPFLVTTRVIAGFLAVIPLYIVGLLGAYFASRSISIWFN 199 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F ++ +K A I +V GF +G V V Sbjct: 200 GQSSGSYDHYFSLFLPPEDVLYSFLKVLVFAFVIILVHCYYGFTATGGPAGVGVAVGRAV 259 Query: 351 VQSISIVIIIDSLFAI 366 +I +V ++D ++ Sbjct: 260 RAAIVLVNVLDFFLSL 275 >gi|302525041|ref|ZP_07277383.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] gi|302433936|gb|EFL05752.1| ABC-transporter integral membrane protein [Streptomyces sp. AA4] Length = 257 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 109/245 (44%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + H G + + + +++ L++Q +++ + L+S GAVIA Sbjct: 7 AALHQTGRLYALGLDVVRLTFRRPFQFRELVQQFWFIASVSILPTALVSIPFGAVIALHI 66 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ + +++ ++TA++IAG GSA+ A++GS I EEIDA+ Sbjct: 67 GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDAMEV 126 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ ++ LI PR+ A + L + + ++G + + F + A Sbjct: 127 LGVSPIQRLIVPRVLAAMGVAVFLNGMVSVVGVLGGYFFNVIMQGGTPGAYLASFSALAQ 186 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 L +++ IKA +VA G +G V VV + ++ +++ + Sbjct: 187 LPDLWISEIKALLFGFVAAVVASYRGLNPRGGPKGVGDAVNQSVVITFLLLFVLNLILTT 246 Query: 367 FYFAI 371 Y + Sbjct: 247 VYLQL 251 >gi|238758308|ref|ZP_04619486.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236] gi|238703431|gb|EEP95970.1| hypothetical protein yaldo0001_1950 [Yersinia aldovae ATCC 35236] Length = 208 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 1/206 (0%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + ++++ G V+ QG L+ + AE ++S+ LRE+G ++TA++ AGR+G Sbjct: 2 QSLLIIVVSGLFIGMVLGLQGFLILTTYSAEASLGMMVSLSLLRELGPVVTALLFAGRAG 61 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG MK E+I ++ M +D +R +++PR WA +IS+PLLT + I G S+V Sbjct: 62 SALTAEIGLMKATEQISSLEMMAIDPLRRVVAPRFWAGLISMPLLTAIFVAVGIWGGSVV 121 Query: 286 IWKYYDIPFAVFFSRFHSTATL-ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + I F+S + ++ LIK+ A + +A+ G+ S + + Sbjct: 122 GVDWKGIDAGFFWSAMQNAVEWRTDLLNCLIKSLVFAITVTWIALFNGYDAIPTSEGISR 181 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV S V+ +D + F Sbjct: 182 ATTRTVVHSSLAVLGLDFVLTALMFG 207 >gi|258546129|ref|ZP_05706363.1| membrane protein [Cardiobacterium hominis ATCC 15826] gi|258518554|gb|EEV87413.1| membrane protein [Cardiobacterium hominis ATCC 15826] Length = 263 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 2/255 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + LG L +R Y GV +P++++ Sbjct: 8 LAAVGATTLACLAALGDFCLFALALLRHVAILLRKPLLTLRATYAAGVLSLPIILVAGLF 67 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V++ Q + +FGAE ++++ LRE+G +++A++ AGR+GSAI AEIG MK Sbjct: 68 VGMVLSFQAYTTMVRFGAEQALGTMVALSLLRELGPVVSALLFAGRAGSAITAEIGLMKT 127 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 E++ A+ M ++ V + PR +LPLLTIL AIIGA +V Y + +F Sbjct: 128 TEQLVAMEMMAIEPVAQVGVPRFLGAWFALPLLTILFVAVAIIGAHLVGVVYLGLDDGIF 187 Query: 298 FSRFHSTATL-ANIFTG-LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 +S ++ +++ G L+K+ +A+ +GF+ ++ + + TT VV S Sbjct: 188 WSGMQNSVDFGSDVVRGMLLKSLVFGWVCAAIAVFQGFSSLPTASGMSRATTTTVVMSSL 247 Query: 356 IVIIIDSLFAIFYFA 370 V+ ++ + F Sbjct: 248 AVLGLNFVLTAMLFG 262 >gi|226349636|ref|YP_002776750.1| putative YrbE family protein [Rhodococcus opacus B4] gi|226245551|dbj|BAH55898.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 304 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG--------- 167 +K I+ S +G S A+ + F+ + +R + V + Sbjct: 32 ALKVIDAPVSHLEEMGRQFSFYNHTIAAIPRTFRRYRAETVRLLAEVSMGTGALAVIGGT 91 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V+ L++ G + QQGA L + G S + + RE + + + G+ Sbjct: 92 LMVISLLTAAVGYEVGQQGATSLGRVGIGALSGFISAFFNTREAIPAIAGIALTATVGAG 151 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+++EEIDA+ TM + + L++ R+ A +I++ L +A F +V Sbjct: 152 FTAQLGAMRVSEEIDAMETMSIPSLPYLVTTRVMAGVIAVIPLYSVALFVGYAATQLVTV 211 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 F+ F+ +++ +K M+ + V G+ +G V Sbjct: 212 YMIGEAKGTFWHYFNVFLVPSDVIWSAVKVLAMSVVVMCVHCYHGYNASGGPAGVGVAVG 271 Query: 348 TCVVQSISIVIIIDSLFAI 366 V S+ +++ID L I Sbjct: 272 RAVRTSLISIMVIDLLIGI 290 >gi|229494293|ref|ZP_04388056.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|229318655|gb|EEN84513.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 281 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 9/261 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 + V ++ Q VI++ ++ + L+ Q+ + G V V Sbjct: 15 RTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGGSVVV 71 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + ISF G+ I +G L+ G S + +I RE+ L+ A+ +A + G+ A Sbjct: 72 IFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGTGFTA 131 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EEIDA+ M + +R L++ R+ A +I++ L ++ F++ + ++ + + Sbjct: 132 QLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAVIRVK 191 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F + +I+ LIK A + +V G+ +G+ + Sbjct: 192 GQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAAGRAL 251 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 SI + D I + + Sbjct: 252 RTSIVFLAFTDVAMTIALWGL 272 >gi|226304167|ref|YP_002764125.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183282|dbj|BAH31386.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 281 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 9/261 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVPV 170 + V ++ Q VI++ ++ + L+ Q+ + G V V Sbjct: 15 RTVDGLSRLGDQFTFHARVITSIPATLKRYWR---EVARLVAQVAFGSGTLLAGGGSVVV 71 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 + ISF G+ I +G L+ G S + +I RE+ L+ A+ +A + G+ A Sbjct: 72 IFAISFFAGSQIGLEGYRGLNLVGLAPLSGVMSAIANTREVAPLVAAITLAAKVGTGFTA 131 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I+EEIDA+ M + +R L++ R+ A +I++ L ++ F++ + ++ + + Sbjct: 132 QLGAMRISEEIDALEVMAIPSLRYLVTTRMIAALIAVVPLYLVGLFASYMATALAVIRVK 191 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F + +I+ LIK A + +V G+ +G+ + Sbjct: 192 GQSEGTYGYYFSLFLSPNDIWLSLIKVMVFAVVVTLVHCYYGYTATGGPEGVGRAAGRAL 251 Query: 351 VQSISIVIIIDSLFAIFYFAI 371 SI + D I + + Sbjct: 252 RTSIVFLAFTDVAMTIALWGL 272 >gi|134103292|ref|YP_001108953.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915915|emb|CAM06028.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 269 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 108/256 (42%), Gaps = 7/256 (2%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PV 170 ++ ++F++D Q ++ + K + L + G V V Sbjct: 3 RRPLEFLDDLGDQMSFYLRTLAWIPKAVTRYV--KETMRLLAEVSFGSGALAVIGGTVGV 60 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 ++ ++ TG V+ QG L+Q G F+ + + REI L+ + ++ GS A Sbjct: 61 MVGMTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTA 120 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I++EIDA+ TMG+ + L++ R+ A +++ L +L ++ + A +V Y Sbjct: 121 QLGAMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVY 180 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + F+ ++ K + + + G+ +G V V Sbjct: 181 GQSAGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAV 240 Query: 351 VQSISIVIIIDSLFAI 366 +I ++D ++ Sbjct: 241 RTAIVTTALLDFFLSL 256 >gi|323436128|ref|ZP_01050723.2| ABC transporter, permease protein [Dokdonia donghaensis MED134] gi|321496443|gb|EAQ38641.2| ABC transporter, permease protein [Dokdonia donghaensis MED134] Length = 233 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 2/234 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAE 196 + K K + +++ + + + +V ISF G V+A Q A L+ + Sbjct: 1 MIKDTFVKPTKGKVLSDLIFKEIDDLIIGSLGIVAFISFFVGGVVAIQTALNLNNPLIPK 60 Query: 197 IFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + LI Sbjct: 61 SLIGFAARQSVILEFAPTFISIIMAGKVGSFITSSIGTMRVTEQIDALEVMGINSLNYLI 120 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 P+I A+++ P + +A F IIGA F S +F K Sbjct: 121 FPKIVAMLV-YPFVIAIAMFLGIIGAYTAAVYGGFTSNDAFLSGLQEDFIPFQLFYAFFK 179 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + + G+ + + +GK TT V + +I+++ + + Sbjct: 180 TFLFAFLLATIPSYHGYFMRGGALEVGKASTTSFVWTSVAIILVNFIVTQLLLS 233 >gi|256380616|ref|YP_003104276.1| hypothetical protein Amir_6633 [Actinosynnema mirum DSM 43827] gi|255924919|gb|ACU40430.1| protein of unknown function DUF140 [Actinosynnema mirum DSM 43827] Length = 279 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 104/266 (39%), Gaps = 10/266 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG-- 167 G++ + + LG + A + + + ++R + V Sbjct: 1 MATTGERARRAASAPLRGLDSLGDQLWFYLRALAWAPRAITRYHREVLRLLAEVSFGSGA 60 Query: 168 -------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 + V++ +S TG V+ QG L Q G F+ + + REI L+ + + Sbjct: 61 LAVIGGTIGVMVGLSVFTGTVVGLQGFTALDQIGTSAFAGFVSAYFNTREIAPLVAGLAL 120 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 + GS A++G+M+I+EEIDA+ MG+ + L++ RI A ++ L ++ ++ + Sbjct: 121 SATVGSGFTAQLGAMRISEEIDALEVMGVPSLPYLVTTRIVAGFAAIVPLYVIGLLTSYL 180 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 A V +Y + F ++ K A I + G+ Sbjct: 181 AARTVTVHFYGQSAGTYDHYFTLFLPPEDVLWSFGKVLVFAVVIILTHCYYGYRASGGPA 240 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V +I ++D ++ Sbjct: 241 GVGVAVGRAVRTAIVTTSLLDFFLSL 266 >gi|134098921|ref|YP_001104582.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291009385|ref|ZP_06567358.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133911544|emb|CAM01657.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 279 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 102/259 (39%), Gaps = 1/259 (0%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + + G + + + LG + + + + +G Sbjct: 9 RTVLRRPGDTLYNLGDQLLFYLYALGAAPLAVRRYLREVVRLLAEVTFGSGALAVIG-GT 67 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + V++ + TG + QG L+Q G + + + REI L+ + ++ G+ Sbjct: 68 IGVILGMCVFTGVTVGLQGFSALNQIGISTLTGFMTAYFNTREIAPLVAGLALSATVGAG 127 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I+EEIDA+ M + + L++ RI A +++ L ++ ++ + + V Sbjct: 128 FTAQLGAMRISEEIDALEVMAVRSLPYLVTTRIVAGFVAVVPLYVIGLLTSYVASRQVTV 187 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 ++ + F ++ K + A+ + G+ +G V Sbjct: 188 WFFGQSGGTYDHYFSLFLPPVDVLWSFGKVLVFSVAVILTHCFYGYRAAGGPAGVGVAVG 247 Query: 348 TCVVQSISIVIIIDSLFAI 366 V SI ++ ++D ++ Sbjct: 248 RAVRTSIVLISVLDLFLSL 266 >gi|126662313|ref|ZP_01733312.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38] gi|126625692|gb|EAZ96381.1| hypothetical protein FBBAL38_03140 [Flavobacteria bacterium BAL38] Length = 233 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 100/234 (42%), Gaps = 2/234 (0%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 E K+ +++++ + + + +V ISF G V+A Q A L+ Sbjct: 1 MLKEIFNKPTKWSVMKQLILKEVDDLIIGSLGIVSFISFFVGGVVAIQTALNLTNPLIPK 60 Query: 198 F-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILI 256 F + E ++++AG+ GS I + IG+M++ E+IDA+ MG++ + L+ Sbjct: 61 FLIGFATRQSVILEFAPTFISIIMAGKMGSFITSSIGTMRVTEQIDALEVMGVNSLNYLV 120 Query: 257 SPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 P+I AL++ P + L+ F + G + F + + +I IK Sbjct: 121 FPKIIALLL-YPFVIGLSMFLGVFGGWMAAVYGGFTTSFEFTTGLQTEFIPFHIAYAFIK 179 Query: 317 APFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + + G+ + + +G+ T V + ++I+++ + + Sbjct: 180 TIVFALLLATIPSFHGYYMKGGALEVGQASTVSFVWTSVVIILMNFILTQLLLS 233 >gi|300782533|ref|YP_003762824.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|41581797|gb|AAS07741.1| putative ABC-transporter integral membrane protein [Amycolatopsis mediterranei S699] gi|299792047|gb|ADJ42422.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 250 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 109/244 (44%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 G + + + ++ L I+Q +++ + L++ GAVI+ Q Sbjct: 1 MLRETGNLFALGLDIVRGLFQRPFQLREFIQQSWFIASVTILPTALVAIPFGAVISLQFG 60 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 Q GA+ ++ + +++ L+TA+++AG GSA+ A+IG+ I EEI A+ + Sbjct: 61 SLARQLGAQSYTGAGSVLATVQQASPLVTALLVAGAGGSAVCADIGARTIREEIAAMEVL 120 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+ V+ LI PR A+++ LL + + ++G + + F + A L Sbjct: 121 GVSAVQRLIVPRTLAMMLVALLLNGMVSVIGVLGGYFFNVVLQGGTPGAYLASFSALAQL 180 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +++ G +KA +VA G +G V VV + ++ +++ + + Sbjct: 181 PDLWVGELKALIFGFIAAVVASYRGLNPSGGPKGVGDAVNQSVVITFLLLFVVNFVITLI 240 Query: 368 YFAI 371 Y I Sbjct: 241 YLQI 244 >gi|120401520|ref|YP_951349.1| hypothetical protein Mvan_0498 [Mycobacterium vanbaalenii PYR-1] gi|119954338|gb|ABM11343.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 112/239 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + + T + + +K + Q ++V + + +S + + Sbjct: 25 LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 85 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 263 >gi|218961658|ref|YP_001741433.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] gi|167730315|emb|CAO81227.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 253 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 3/246 (1%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 L ++ E + LL +IRQ+ + GV +P++ I+ G + Sbjct: 7 KSLRDFFLFLEETVT---ELLHIKHNRHVSLLVVIRQILFTGVEALPLIGFIALAIGCLT 63 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 QG LS FG I+ ++ + + E+ ++TA+++ RSG+AI E+G+M +N E+ Sbjct: 64 IMQGYAFLSNFGQGIWVHIILVRVVVGELSGIITALVVIARSGTAISTELGNMVVNREMQ 123 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 +++ + + L+ RI ++IS+ +LT+ N A++G + + + F F + F Sbjct: 124 LLKSFDIAPMGYLVVSRILGVVISMLVLTLYFNIIAVLGGWLFAQFFNHLSFGAFMNDFL 183 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 S T I ++K+ I I A EG +V S + ++ VV SI V+I+D Sbjct: 184 SVLTFPYILMTILKSVIFGFVIAITASYEGMSVYRASTEVPQRTIKAVVISIFSVLILDL 243 Query: 363 LFAIFY 368 + + + Sbjct: 244 IISWLF 249 >gi|239945574|ref|ZP_04697511.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] gi|239992041|ref|ZP_04712705.1| putative YrbE family protein [Streptomyces roseosporus NRRL 11379] gi|291449029|ref|ZP_06588419.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291351976|gb|EFE78880.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 267 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 105/253 (41%), Gaps = 3/253 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173 ++ +++ S Q + + ++ V + V+I Sbjct: 2 AMLNWLDRSGDQLTFYIRTLVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIA 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G+ A++G Sbjct: 62 MTLFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEE+DA+ MG+ + L++ RI A ++++ L + S+ + + + + Sbjct: 122 AMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQS 181 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ + ++ ++K + + + GF +G V V + Sbjct: 182 AGTYDHYFNLFLSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241 Query: 354 ISIVIIIDSLFAI 366 I ++ + D ++ Sbjct: 242 IVLISVTDFFLSL 254 >gi|254392559|ref|ZP_05007737.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294816013|ref|ZP_06774656.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326444355|ref|ZP_08219089.1| putative YrbE family protein [Streptomyces clavuligerus ATCC 27064] gi|197706224|gb|EDY52036.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294328612|gb|EFG10255.1| ABC-transporter integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 267 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 103/251 (41%), Gaps = 1/251 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + L + + + + + V + V++ ++ Sbjct: 5 RWLERSGDQLAFYLRALLWIPRTLHRYLREVQRLLAEV-AFGSGGLGVIGGTIGVMVAMT 63 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 TG V+ QG L+Q G F+ + + REI L+ + ++ G+ A++G+M Sbjct: 64 LFTGTVVGLQGYAALNQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAM 123 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +INEE+DA+ MG+ + L++ RI A ++++ L + S+ + + + + Sbjct: 124 RINEEVDALEAMGVRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVVFNGQSTG 183 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + F + ++ ++K + + + GF +G V V +I Sbjct: 184 TYDHYFQLFLSPDDVLLSILKVLIFSVMVILAHCYYGFRAEGGPAGVGVAVGRSVRNAIV 243 Query: 356 IVIIIDSLFAI 366 ++ + D ++ Sbjct: 244 LISVTDFFLSL 254 >gi|108798619|ref|YP_638816.1| hypothetical protein Mmcs_1650 [Mycobacterium sp. MCS] gi|119867717|ref|YP_937669.1| hypothetical protein Mkms_1676 [Mycobacterium sp. KMS] gi|126434218|ref|YP_001069909.1| hypothetical protein Mjls_1625 [Mycobacterium sp. JLS] gi|108769038|gb|ABG07760.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693806|gb|ABL90879.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126234018|gb|ABN97418.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 266 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 112/239 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + + T + + +K + Q ++V + + +S + + Sbjct: 22 LSIIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 81 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 82 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 141 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 142 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 201 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 202 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 260 >gi|289641746|ref|ZP_06473904.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289508390|gb|EFD29331.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 290 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 1/250 (0%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 G + + + + + Q + +S ++ + F+ G Sbjct: 33 RGVKQAVTTGGEIAQFSARTIRDFGDIRHYASEVFHQAGILILSSGLIIWSMQFIMGMQC 92 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + ++ L Q GA ++S + LRE+ + + A + G +VAEIGSM+I +EID Sbjct: 93 GLEASYTLKQIGAPLYSGIFNAYCSLREMAPYMYGYIFAAKVGCGLVAEIGSMRIADEID 152 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY-DIPFAVFFSRF 301 A+ MG+ L+ RI A I++P L + I +V + + F Sbjct: 153 AMEVMGVRSRSYLVGTRIMAAWIAMPFLFTVGLGLMYISMYLVTVVQLGGVSAGGYNYIF 212 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + +IK M I V+ G+ S +GK ++ ++ ++ +I Sbjct: 213 WLYQNPLDFLFSMIKMLSMGTTIVFVSCYYGYTASGGSVGVGKNTAKSMMLNMVLIHVIG 272 Query: 362 SLFAIFYFAI 371 L ++ + Sbjct: 273 LLTTQLFWGL 282 >gi|254818557|ref|ZP_05223558.1| hypothetical protein MintA_01474 [Mycobacterium intracellulare ATCC 13950] Length = 289 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 4/255 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + LG + + +RQ ++ + V +L++ Sbjct: 29 VVRHPLASLNTLGEQYILAVRTVEYCMVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G ++ Q A +Q GA + + +R+ L+ AV++A GSAI A++GS Sbjct: 89 PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE DA+ MG+ +R L+ PR A I+ LT + F + + + + Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + F S AT ++ L+KA + ++A ++G + V VV+SI + Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268 Query: 357 VIIIDSLFAIFYFAI 371 ++I++ + Y + Sbjct: 269 LMIVNVGISQLYNTL 283 >gi|145221253|ref|YP_001131931.1| hypothetical protein Mflv_0654 [Mycobacterium gilvum PYR-GCK] gi|315441852|ref|YP_004074731.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213739|gb|ABP43143.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260155|gb|ADT96896.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 269 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 111/239 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + + T + + K + Q ++V + + +S + + Sbjct: 25 LSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 85 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 263 >gi|182434832|ref|YP_001822551.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775350|ref|ZP_08234615.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] gi|178463348|dbj|BAG17868.1| putative YrbE family protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655683|gb|EGE40529.1| protein of unknown function DUF140 [Streptomyces cf. griseus XylebKG-1] Length = 267 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 105/253 (41%), Gaps = 3/253 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173 ++ +++ S Q + + ++ V + V++ Sbjct: 2 AMLSWLDRSGDQLTFYVKALVWIPRTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMVA 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TG V+ QG L+Q G F+ + + REI L+ + ++ G+ A++G Sbjct: 62 MTLFTGTVVGLQGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEE+DA+ MG+ + L++ RI A ++++ L + S+ + + + + Sbjct: 122 AMRINEEVDALEAMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRWITIFFNGQS 181 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ + ++ ++K + + + GF +G V V + Sbjct: 182 AGTYDHYFNLFLSPQDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241 Query: 354 ISIVIIIDSLFAI 366 I ++ + D ++ Sbjct: 242 IVLISVTDFFLSL 254 >gi|291004489|ref|ZP_06562462.1| putative ABC transport system permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 279 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 106/253 (41%), Gaps = 7/253 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVIL 173 ++F++D Q ++ + K + L + G V V++ Sbjct: 16 LEFLDDLGDQMSFYLRTLAWIPKAVTRYV--KETMRLLAEVSFGSGALAVIGGTVGVMVG 73 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TG V+ QG L+Q G F+ + + REI L+ + ++ GS A++G Sbjct: 74 MTLFTGTVVGLQGYAALNQIGTSAFAGFVSAYFNTREIAPLVAGLALSATVGSGFTAQLG 133 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I++EIDA+ TMG+ + L++ R+ A +++ L +L ++ + A +V Y Sbjct: 134 AMRISDEIDALETMGVPSLPYLVTTRVVAGFVAVVPLYVLGLLTSYLAARLVTVHVYGQS 193 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ ++ K + + + G+ +G V V + Sbjct: 194 AGTYDHYFNLFLPPEDVLWSFGKVLVFSVVVIMTHCYYGYRASGGPAGVGVAVGRAVRTA 253 Query: 354 ISIVIIIDSLFAI 366 I ++D ++ Sbjct: 254 IVTTALLDFFLSL 266 >gi|328880857|emb|CCA54096.1| toluene tolerance protein [Streptomyces venezuelae ATCC 10712] Length = 268 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 101/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 ++ + +L + R + V + V++ ++ TG V+ Sbjct: 14 QLLFYVKALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMVAMTLFTGTVVGL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALEQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSQGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + I GF +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIIAHCYYGFRASGGPAGVGIAVGRSVRNAIVLISVTDFFL 253 Query: 365 AI 366 ++ Sbjct: 254 SL 255 >gi|49072908|gb|AAT51759.1| TrnB1 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 112/239 (46%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + + T + + +K + Q ++V + + +S + + Sbjct: 25 LSVIGGLYAMTLDMFVAMFKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG +T +++AG SA+ A++GS I EE+DA+R +G Sbjct: 85 LLGEFGAADFSGTGAALGAVNQIGPFVTVLVVAGAGASAMCADLGSRTIREEVDAMRVLG 144 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD + L+ PR+ A + LL+ + + ++GA + + + F + L Sbjct: 145 LDPIHSLVVPRVLATTLVAVLLSSVVTVTGLLGAFLFSVYFQHVTPGSFVASMTLITGLG 204 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA G++A +G V + +G V+ VV + ++ +++++ Sbjct: 205 DVLVSLVKATLFGFVAGLIACYQGLRVQKGAAGVGNAVSETVVIAFLLLFVVNAIVTAV 263 >gi|145220618|ref|YP_001131296.1| hypothetical protein Mflv_0012 [Mycobacterium gilvum PYR-GCK] gi|145213104|gb|ABP42508.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 312 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 1/290 (0%) Query: 83 SLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF-INDSCSQAHILGLVISNTGE 141 S + R Q +S + +G + + + + L + Sbjct: 17 SECTAAERTSGMTTADQPVRRDDSVHAVQDWVGGYVRRHPLASLATVGDQFVLGVRTLQW 76 Query: 142 FCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSID 201 F + + +RQ ++ + V +L++ G ++ Q A Q GA + Sbjct: 77 FFVDLFTGRFQFQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGA 136 Query: 202 LMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIW 261 + +R+ L A+++A GSAI A++GS K+ EE DA+ MG+ +R L+ PR Sbjct: 137 ASGLAVIRQAASLTAAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRLVVPRFA 196 Query: 262 ALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMA 321 A I+ LT + F + + + + + F + F S AT ++ L+KA Sbjct: 197 AAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALVKAVIFG 256 Query: 322 CAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + IV+ ++G + + V VV+SI ++++++ + Y + Sbjct: 257 AIVAIVSCQKGLSTQGGPTGVANSVNAAVVESILVLMVVNVAISQLYILM 306 >gi|300789441|ref|YP_003769732.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299798955|gb|ADJ49330.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 264 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 108/249 (43%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + G + + + + + + + Q +++ + IL+S GAVI Sbjct: 10 QKAANGLREFGRMCAMGLDVLLAMLRRPYQVREFVLQFWFIASVSITPAILVSIPFGAVI 69 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 + Q SQ GA+ F+ + +++ ++T ++IAG GSAI A++G+ I EEI Sbjct: 70 SLQLGSLTSQIGAQQFNGAASVLAVVQQASPIVTTLIIAGAGGSAICADLGARSIREEIA 129 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+ + L+ PR+ A + LL L + ++G + + F+ Sbjct: 130 AMEVLGVSPIHRLVVPRVQAAVGVSVLLNGLVSVVGVLGGYFFGVIIQGGTPGAYLASFN 189 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + A L ++ IKA G+VA G +G V VV + ++ +++ Sbjct: 190 ALAQLPDLVVSSIKAVIFGYLAGVVAAYRGLNPKGGPKGVGDVVNQSVVITFLLLFFVNT 249 Query: 363 LFAIFYFAI 371 + Y + Sbjct: 250 VLTALYLQL 258 >gi|296171119|ref|ZP_06852572.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894375|gb|EFG74128.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 256 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 106/241 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + + + + +K + Q ++V + +L++ ++ Sbjct: 12 LRSAGEFFAMSLDTFVAMFKLPFPWREFLLQTWFVARVSIIPTLLLTIPFTVLVVFTMNI 71 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS + + +IG ++T +++AG +A+ A++G+ I++E+DA+R MG Sbjct: 72 LLVEFGAADFSGTGAATASVTQIGPVVTVLVVAGTGATAMCADLGARAIHDELDALRVMG 131 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D VR L +PR+ A + L L + G+ + F + L Sbjct: 132 VDPVRRLAAPRVLAATVVAVSLVSLVTLVGLGGSFFFSVFIQHVTPGAFAAGLTLLTHLP 191 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 ++ GL+K A ++A +G +VG +G V VV S + +I+ + Y Sbjct: 192 DLVLGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINIVATAVY 251 Query: 369 F 369 + Sbjct: 252 Y 252 >gi|223937195|ref|ZP_03629102.1| protein of unknown function DUF140 [bacterium Ellin514] gi|223894217|gb|EEF60671.1| protein of unknown function DUF140 [bacterium Ellin514] Length = 311 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 117/278 (42%), Gaps = 5/278 (1%) Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK-GFLL 154 + + + + G+K+++F+ + G + + Sbjct: 37 PERHYLLWAPLPRAYSNYFGRKVIRFLLTIQGLGAFF---LITLGVIFTKFRRARSVVWP 93 Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 + +++ GV +P+ + +S G V+ Q L++ A + +M ++ +REIG + Sbjct: 94 LIWQELNRSGVKLLPMFLFLSLAMGLVVIGQAVSWLTRVNAVQYLGTIMVLVVVREIGPM 153 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 LTA+++ R+G++ V E+G+ + E++A+ + +D + L+ PR+ + I + LT+ Sbjct: 154 LTALLVLARAGTSNVIELGTARALGEVEALEALVIDPIHYLVMPRVIGMAIGVFSLTVYF 213 Query: 275 NFSAIIGASIVIWKY-YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 +++ + + + +F + + + K+ I ++ G Sbjct: 214 ILGSLLSGYMWAFLQDVPLRPTDYFEQLAGALSYTDFIVLGTKSILFGVIISVITCYHGL 273 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 A + + V QS+ + +D+LF + Y + Sbjct: 274 AQPLQLEEVSNATVRAVAQSVIACVALDALFIVIYLVL 311 >gi|254773146|ref|ZP_05214662.1| hypothetical protein MaviaA2_00471 [Mycobacterium avium subsp. avium ATCC 25291] Length = 289 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 4/255 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + LG + + +RQ ++ + V +L++ Sbjct: 29 VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G ++ Q A +Q GA + + +R+ L+ AV++A GSAI A++GS Sbjct: 89 PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLMASAVGSAITADLGSRT 148 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE DA+ MG+ +R L+ PR A I+ LT + F + + + + Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + F S AT ++ L+KA + ++A ++G + V VV+SI + Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268 Query: 357 VIIIDSLFAIFYFAI 371 ++I++ + Y + Sbjct: 269 LMIVNVGISELYNTL 283 >gi|240170711|ref|ZP_04749370.1| hypothetical protein MkanA1_15455 [Mycobacterium kansasii ATCC 12478] Length = 255 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 107/242 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + +K+ + Q ++V + +L++ ++ Sbjct: 11 LRSVGEFFAMSLDTLVAMFKWPFPWREFLLQSWFVARVSIIPTLLLAIPFTVLVVFTLNI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS + + +IG ++T +++AG +A+ A++G+ I++E+DA+R MG Sbjct: 71 LLVEFGAADFSGTGAATASVTQIGPIVTVLVVAGTGATAMCADLGARTIHDELDALRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D +R L +PR+ A + L L + G+ + F + L Sbjct: 131 VDPIRRLAAPRVLAATVVAVSLVSLVTLVGLAGSFAFSVFVQHVTPGAFAAGLTLITHLP 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + GL+K A ++A +G +VG +G V VV S + +I+ + + Sbjct: 191 ELILGLVKGALFGMAAALIACYKGISVGGGPQGVGNAVNETVVYSFIALFVINIVATAVF 250 Query: 369 FA 370 + Sbjct: 251 YV 252 >gi|297190650|ref|ZP_06908048.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719877|gb|EDY63785.1| ABC-transporter integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 267 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 101/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 +I + +L + R + V + V+I ++ TG V+ Sbjct: 13 QLIFYVRALLWIPKTLRRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGL 72 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L+Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 73 QGYAALNQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 132 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F Sbjct: 133 EAMGVRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRWVTVLFNGQSAGTYDHYFALF 192 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 193 LSPDDVLLSILKVLIFSVMVILAHCYHGFRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 252 Query: 365 AI 366 ++ Sbjct: 253 SL 254 >gi|15610637|ref|NP_218018.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Rv] gi|31794677|ref|NP_857170.1| integral membrane protein YrbE4a [Mycobacterium bovis AF2122/97] gi|121639420|ref|YP_979644.1| integral membrane protein YrbE4a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663365|ref|YP_001284888.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra] gi|148824708|ref|YP_001289462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis F11] gi|167967132|ref|ZP_02549409.1| conserved membrane protein YrbE4A [Mycobacterium tuberculosis H37Ra] gi|215405542|ref|ZP_03417723.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|215413414|ref|ZP_03422098.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 94_M4241A] gi|215429007|ref|ZP_03426926.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T92] gi|215432469|ref|ZP_03430388.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|215447834|ref|ZP_03434586.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T85] gi|218755278|ref|ZP_03534074.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis GM 1503] gi|219559568|ref|ZP_03538644.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis T17] gi|224991916|ref|YP_002646605.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253800543|ref|YP_003033544.1| hypothetical protein TBMG_03546 [Mycobacterium tuberculosis KZN 1435] gi|254234087|ref|ZP_04927412.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis C] gi|254366847|ref|ZP_04982888.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis str. Haarlem] gi|254552603|ref|ZP_05143050.1| hypothetical protein Mtube_19505 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188553|ref|ZP_05766027.1| hypothetical protein MtubCP_21377 [Mycobacterium tuberculosis CPHL_A] gi|260202680|ref|ZP_05770171.1| hypothetical protein MtubT4_21968 [Mycobacterium tuberculosis T46] gi|260206868|ref|ZP_05774359.1| hypothetical protein MtubK8_21506 [Mycobacterium tuberculosis K85] gi|289445098|ref|ZP_06434842.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T46] gi|289449203|ref|ZP_06438947.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis CPHL_A] gi|289555767|ref|ZP_06444977.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 605] gi|289571734|ref|ZP_06451961.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T17] gi|289576235|ref|ZP_06456462.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85] gi|289747337|ref|ZP_06506715.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|289752222|ref|ZP_06511600.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T92] gi|289755631|ref|ZP_06515009.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|289759660|ref|ZP_06519038.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289763681|ref|ZP_06523059.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis GM 1503] gi|294995729|ref|ZP_06801420.1| hypothetical protein Mtub2_14793 [Mycobacterium tuberculosis 210] gi|297636157|ref|ZP_06953937.1| hypothetical protein MtubK4_18625 [Mycobacterium tuberculosis KZN 4207] gi|297733157|ref|ZP_06962275.1| hypothetical protein MtubKR_18795 [Mycobacterium tuberculosis KZN R506] gi|298526981|ref|ZP_07014390.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777851|ref|ZP_07416188.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu001] gi|306782582|ref|ZP_07420919.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu002] gi|306786400|ref|ZP_07424722.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu003] gi|306790769|ref|ZP_07429091.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu004] gi|306795299|ref|ZP_07433601.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu005] gi|306799487|ref|ZP_07437789.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu006] gi|306805333|ref|ZP_07442001.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu008] gi|306809519|ref|ZP_07446187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu007] gi|306969626|ref|ZP_07482287.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu009] gi|306973969|ref|ZP_07486630.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu010] gi|307081677|ref|ZP_07490847.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu011] gi|307086285|ref|ZP_07495398.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu012] gi|313660488|ref|ZP_07817368.1| hypothetical protein MtubKV_18790 [Mycobacterium tuberculosis KZN V2475] gi|2924438|emb|CAA17738.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A [Mycobacterium tuberculosis H37Rv] gi|31620274|emb|CAD95717.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A [Mycobacterium bovis AF2122/97] gi|121495068|emb|CAL73554.1| Conserved hypothetical integral membrane protein yrbE4A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599616|gb|EAY58720.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis C] gi|134152356|gb|EBA44401.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis str. Haarlem] gi|148507517|gb|ABQ75326.1| conserved hypothetical integral membrane protein YrbE4a [Mycobacterium tuberculosis H37Ra] gi|148723235|gb|ABR07860.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis F11] gi|224775031|dbj|BAH27837.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253322046|gb|ACT26649.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis KZN 1435] gi|289418017|gb|EFD15257.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T46] gi|289422161|gb|EFD19362.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis CPHL_A] gi|289440399|gb|EFD22892.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 605] gi|289540666|gb|EFD45244.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis K85] gi|289545488|gb|EFD49136.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T17] gi|289687865|gb|EFD55353.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis 02_1987] gi|289692809|gb|EFD60238.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis T92] gi|289696218|gb|EFD63647.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis EAS054] gi|289711187|gb|EFD75203.1| hypothetical integral membrane protein yrbE4A [Mycobacterium tuberculosis GM 1503] gi|289715224|gb|EFD79236.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298496775|gb|EFI32069.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308213831|gb|EFO73230.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu001] gi|308324772|gb|EFP13623.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu002] gi|308329036|gb|EFP17887.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu003] gi|308332875|gb|EFP21726.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu004] gi|308336458|gb|EFP25309.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu005] gi|308340336|gb|EFP29187.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu006] gi|308344191|gb|EFP33042.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu007] gi|308348121|gb|EFP36972.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu008] gi|308352885|gb|EFP41736.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu009] gi|308356698|gb|EFP45549.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu010] gi|308360652|gb|EFP49503.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu011] gi|308364269|gb|EFP53120.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis SUMu012] gi|323717843|gb|EGB27034.1| hypothetical protein TMMG_03675 [Mycobacterium tuberculosis CDC1551A] gi|326905343|gb|EGE52276.1| hypothetical membrane protein yrbE4A [Mycobacterium tuberculosis W-148] gi|328460274|gb|AEB05697.1| integral membrane protein YrbE4a [Mycobacterium tuberculosis KZN 4207] gi|328864220|gb|AEB53193.1| conserved integral membrane protein YRBE4A [Mycobacterium tuberculosis] Length = 254 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 98/247 (39%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I A +G + + ++++ + Q + V + +L+S Sbjct: 1 MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTV 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L + GA S + + ++G ++T +++AG +AI A++G+ I EE Sbjct: 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D ++ L+ PR+ A + LL L + G + F + Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFING 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + IKA G+V G V +G V VV + + +I Sbjct: 181 LTVLTGLRELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240 Query: 361 DSLFAIF 367 + + Sbjct: 241 NVVMTAI 247 >gi|41406190|ref|NP_959026.1| hypothetical protein MAP0092 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394538|gb|AAS02409.1| hypothetical protein MAP_0092 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 289 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 4/255 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + LG + + +RQ ++ + V +L++ Sbjct: 29 VVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVLPTVLVAL 88 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G ++ Q A +Q GA + + +R+ L+ AV+ A GSAI A++GS Sbjct: 89 PIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLTASAVGSAITADLGSRT 148 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 + EE DA+ MG+ +R L+ PR A I+ LT + F + + + + Sbjct: 149 MREETDAMEVMGVSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGS 208 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 F + F S AT ++ L+KA + ++A ++G + V VV+SI + Sbjct: 209 FVATFSSFATTEDMIVALLKAVIYGAIVAVIACQKGLFTKGGPAGVANSVNAAVVESILV 268 Query: 357 VIIIDSLFAIFYFAI 371 ++I++ + Y + Sbjct: 269 LMIVNVGISELYNTL 283 >gi|296138972|ref|YP_003646215.1| hypothetical protein Tpau_1245 [Tsukamurella paurometabola DSM 20162] gi|296027106|gb|ADG77876.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 287 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 4/270 (1%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY-KFKGFLLSLI- 157 R F NL GK F + + VI + L + Sbjct: 6 RPRGTRWFYNLFGSSGKAWTGF-DSLGHVVSFIAEVIRTVPHAIKHYRSQIMYILTDITW 64 Query: 158 -RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 R VG PV+ ++ GA++A QG L+ G + S RE LL Sbjct: 65 GRGALVVGGGTAPVLAVLGITVGAIVAVQGFAILNMLGMGPLTAVAASFANTREFAPLLA 124 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V A ++G + AEIG+M+INEEIDA+ ++GL V +++ R+ A +I++ + ++ Sbjct: 125 GVGFAAQAGCRMTAEIGAMRINEEIDALESLGLRSVSFVVTTRVLAGLIAVIPVYLITLI 184 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + + ++ Y +P + F + ++I +IK A+ I+ +GF Sbjct: 185 LSWLSCAWMVTSVYGMPTGTYQHYFSQFVSASDIIFSVIKVAVFLVAVIIIHCYQGFFAS 244 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +G + S+ V+I++ + + Sbjct: 245 GGPEGVGTASGRAIRASLVAVVILNLVMTV 274 >gi|326331738|ref|ZP_08198026.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325950537|gb|EGD42589.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 257 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 115/248 (46%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 S +G + TGE ++ K L + Q +++ + +L+S GAVI+ Sbjct: 4 QFASLVRGVGGMGLMTGEVVKGTFTTKFQLREFLEQAWFITSVTMMPAVLVSIPFGAVIS 63 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q Q GA+ F+ + +RE + A++IAG +GSAI +++GS KI EEIDA Sbjct: 64 LQVGNLAGQLGAQSFAGATAVLAVVREAAPMAAALIIAGAAGSAICSDMGSRKIREEIDA 123 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + +G+D V L+ PR+ A + ++ + + I G F S F + Sbjct: 124 MEVLGIDPVVRLVIPRVLACLFVSVMINGIVIATGIGGGYFFTVIVQGGSAGAFLSSFTA 183 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 A+L +++ ++K+ I+ G + +G+ V V+ + ++ +++S+ Sbjct: 184 LASLPDLYISMVKSALFGFLAAIIGAYNGLNAQGGPSGVGRAVNEAVIIAFMMLFVLNSI 243 Query: 364 FAIFYFAI 371 YF I Sbjct: 244 MTAVYFQI 251 >gi|315442585|ref|YP_004075464.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260888|gb|ADT97629.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 237 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 93/230 (40%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + +++ + Q + + + +L++ ++A L + GA Sbjct: 1 MSLDTFVKTFRRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAAD 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ L+ Sbjct: 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A LL L + G + + F + L + IKA Sbjct: 121 PRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILAEIKA 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+V G V +G V VV + + +I+ + Sbjct: 181 LLFGFVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230 >gi|169631233|ref|YP_001704882.1| hypothetical protein MAB_4155c [Mycobacterium abscessus ATCC 19977] gi|169243200|emb|CAM64228.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 255 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 100/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + A +G +S + + ++ + Q +++ + +L++ ++ Sbjct: 3 QQLAAPARAVGGFVSMSLATFRNIFRRPFQGQEFLDQTWFIARVSLLPTLLVAIPFTVLV 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A L + GA S + + ++G ++T +++AG +AI A++G+ I EEID Sbjct: 63 AFTLNILLREIGAADLSGAATAFGTVTQLGPVVTVLVVAGAGATAICADLGARTIREEID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +G+D ++ L+ PR+ A LL L ++G + + F + Sbjct: 123 AMQVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFINGLT 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + +KA G+V G V +G V VV + + +I+ Sbjct: 183 VLTGLGELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLFVINV 242 Query: 363 LFAIF 367 + Sbjct: 243 VMTAI 247 >gi|295135743|ref|YP_003586419.1| ABC-type transporter permease protein [Zunongwangia profunda SM-A87] gi|294983758|gb|ADF54223.1| ABC-type transporter permease protein [Zunongwangia profunda SM-A87] Length = 225 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 2/216 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ-FGAEIFSIDLMSILQLREIGVL 214 + +++ + + + +V +SF GAV+A Q A L+ + + E Sbjct: 11 IFKEIDELIIGSLGIVCFLSFFIGAVVAIQTALNLNNPLIPKSLVAFAARQSVILEFSPT 70 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++++AG+ GS I + IGSM++ E+IDA+ MG++ LI P+I A +++ P + ++ Sbjct: 71 FISIIMAGKVGSFITSSIGSMRVTEQIDALEVMGINSKNYLIFPKIIA-MLTYPFVIAIS 129 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 F I+GA + + F S ++ IK A + V G+ Sbjct: 130 MFLGILGAYVAAVLGGFVKPDDFVSGLQDDFVTFHLIYAFIKTFLFAFILATVPAYHGYY 189 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + +G+ TT V + ++II + + Sbjct: 190 MKGGALEVGQASTTAFVWTSVVLIITNYATTQLLLS 225 >gi|32141168|ref|NP_733570.1| ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|256787959|ref|ZP_05526390.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|289771846|ref|ZP_06531224.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] gi|24413768|emb|CAD55305.1| putative ABC-transporter integral membrane protein [Streptomyces coelicolor A3(2)] gi|289702045|gb|EFD69474.1| ABC-transporter integral membrane protein [Streptomyces lividans TK24] Length = 268 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 ++ + +L + R + V + V+I ++ TG V+ Sbjct: 14 QLLFYVRALLWVPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVVGI 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALDQIGTSAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSFLASRYVTVLFNGQSRGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + G+ +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVLIFSVMVIVAHCYYGYRASGGPAGVGVAVGRSVRNAIVLISVTDFFL 253 Query: 365 AI 366 ++ Sbjct: 254 SL 255 >gi|320007321|gb|ADW02171.1| protein of unknown function DUF140 [Streptomyces flavogriseus ATCC 33331] Length = 267 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 105/253 (41%), Gaps = 3/253 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173 ++ +++ S Q + K ++ V + V+I Sbjct: 2 SVLGWLDRSGEQLTFYVRALVWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIA 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TG+V+ QG L Q G F+ + + REI L+ + ++ G+ A++G Sbjct: 62 MTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEE+DA+ MG+ + L++ RI A ++++ L + S+ + + + + Sbjct: 122 AMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRWITVLFNGQS 181 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ + ++ ++K + + + GF +G V V + Sbjct: 182 AGTYDHYFNLFLSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241 Query: 354 ISIVIIIDSLFAI 366 I ++ + D ++ Sbjct: 242 IVLISVTDFFLSL 254 >gi|269124785|ref|YP_003298155.1| hypothetical protein Tcur_0520 [Thermomonospora curvata DSM 43183] gi|268309743|gb|ACY96117.1| protein of unknown function DUF140 [Thermomonospora curvata DSM 43183] Length = 262 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 110/243 (45%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + +G + E ++ + + + Q +++ VIL++ GA +A Q Sbjct: 12 GLLNQVGELFVVALEGLRRTWDVRTWFWEFVEQCWFLARVTSIPVILVALPLGATVALQV 71 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ + + + +RE+ + A++IAG GSA+ A++G+ +I +E+DA+ Sbjct: 72 GQVAAQLGAQSATGGAVIVGLVREVAPIAAAMIIAGAGGSAMTADMGTRRIRDELDAMEV 131 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 M ++ + L++PR+WA + LL L S G + D+ +F S Sbjct: 132 MAINPIHRLVTPRLWAASLISTLLVSLVVLSGAAGGFVFNVLLQDVTPGAYFDGATSLLQ 191 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +++ L+KA GIVA G +G+ V +V + +V ++ + Sbjct: 192 TSDLVVTLLKAWLFGMIAGIVACYMGMNCASTPVGVGRAVNQAIVVAFLLVFALNYVITT 251 Query: 367 FYF 369 YF Sbjct: 252 VYF 254 >gi|118470037|ref|YP_890128.1| hypothetical protein MSMEG_5902 [Mycobacterium smegmatis str. MC2 155] gi|118171324|gb|ABK72220.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 254 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 99/247 (40%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I A +G + + + A ++ L + Q + + + +L++ Sbjct: 1 MIEQLAVPARAVGGFVEMSLDTFAKIFRRPFQLKEFLDQTWMIARVSLVPTLLVAIPFTV 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L + GA S + + ++G ++T +++AG +AI A++G+ I EE Sbjct: 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D ++ L+ PR+ A LL L + G + + F + Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + IKA G+V G V +G V VV + + +I Sbjct: 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240 Query: 361 DSLFAIF 367 + + Sbjct: 241 NVIMTAV 247 >gi|326331737|ref|ZP_08198025.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950536|gb|EGD42588.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 280 Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 107/254 (42%), Gaps = 10/254 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG---------VPVV 171 + + G + + A + + + + ++ + V V V+ Sbjct: 13 VKEQRQAVEGYGDQLLFYAKALAWAPRTIRRYKREVLNILAEVAFGAGGLTMIAGTVGVI 72 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++F G+ + QG LSQ G FS + + RE+ L++++ +A G A Sbjct: 73 AFMAFFAGSEVGIQGYASLSQIGVAKFSAFISAFFNTREVAPLISSIALAATVGCGYTAR 132 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+I+EEIDA+ MG+ + L++ R+ A +++ L I+A ++ + ++ Y Sbjct: 133 LGAMRISEEIDALEAMGVPSLPYLVTTRMIAGFLAVIPLYIVALCASYLSPRLITTLMYG 192 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + F + +I +K +A AI ++ G+ +G V + Sbjct: 193 QSGGTYDHYFLAFLPPIDILYSFLKLIILAVAIILIHCYYGYTASGGPAGVGIAVGKAIR 252 Query: 352 QSISIVIIIDSLFA 365 SI V++ D + Sbjct: 253 TSIVTVVVADFFLS 266 >gi|257054990|ref|YP_003132822.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] gi|256584862|gb|ACU95995.1| ABC-type transport system involved in resistance to organic solvents, permease component [Saccharomonospora viridis DSM 43017] Length = 267 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 96/223 (43%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 + G + + E + ++Q +++ + L++ G VIA Sbjct: 17 AAIRQAGKLYALALEVLRCIPRRPFQFREFVQQFWFIASVSILPTALVAIPFGGVIALHV 76 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +Q GA+ F+ + +++ ++TA++IAG GSA+ A++GS I EEIDA++ Sbjct: 77 GSLTTQIGAQSFTGAASVLAIIQQASPIVTALLIAGAGGSAMCADLGSRTIREEIDALKV 136 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+ ++ L+ PR+ A + L + + + G D + + F + A Sbjct: 137 LGVSPIQRLVVPRVLAAMAVAVFLNGMVSVVGVCGGYFFNVIMQDGTPGAYLASFSALAQ 196 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 L +++ G IKA G+VA G +G V Sbjct: 197 LPDLWIGEIKALVFGFVAGVVAAHRGLNPSAGPKGVGDAVNQS 239 >gi|282866016|ref|ZP_06275064.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] gi|282559055|gb|EFB64609.1| protein of unknown function DUF140 [Streptomyces sp. ACTE] Length = 267 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 105/253 (41%), Gaps = 3/253 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYYVGVSGVPVVIL 173 ++ +++ S Q + + ++ V + V+I Sbjct: 2 SMLGWLDRSGEQLTFYVRALVWIPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIA 61 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ TG+V+ QG L Q G F+ + + REI L+ + ++ G+ A++G Sbjct: 62 MTLATGSVVGLQGYAALDQIGTSAFTGFISAYFNTREIAPLVAGLALSATVGAGFTAQLG 121 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEE+DA+ MG+ + L++ RI A ++++ L + S+ + + + + Sbjct: 122 AMRINEEVDALEAMGVRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYITVLFNGQS 181 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ + ++ ++K + + + GF +G V V + Sbjct: 182 AGTYDHYFNLFLSPDDVLLSVLKVLIFSVLVILAHCYYGFHATGGPAGVGVAVGRSVRNA 241 Query: 354 ISIVIIIDSLFAI 366 I ++ + D ++ Sbjct: 242 IVLISVTDFFLSL 254 >gi|240170056|ref|ZP_04748715.1| membrane protein YrbE4A [Mycobacterium kansasii ATCC 12478] Length = 254 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 98/247 (39%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I A +G + + ++ + + Q + V + +L+S Sbjct: 1 MIQQLAVPARAVGGFFEMSIDTGRAALRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTV 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L + GA S + + ++G ++T +++AG +AI A++G+ I EE Sbjct: 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D ++ L+ PR+ A + LL L + G + + F + Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTLVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + +KA G+V G V +G V VV + + +I Sbjct: 181 LTVLTGLRELILAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240 Query: 361 DSLFAIF 367 + + Sbjct: 241 NVVMTAI 247 >gi|239982860|ref|ZP_04705384.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291454703|ref|ZP_06594093.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] gi|291357652|gb|EFE84554.1| ABC-transporter integral membrane protein [Streptomyces albus J1074] Length = 268 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 102/242 (42%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 +I A + +L + R + V V V+I ++ TG V+ Sbjct: 14 QLIFYVKALAAIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTVGVMIAMTLFTGTVVGL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + + + + F+ Sbjct: 134 EGMGIRSMPYLVTTRIIAGVVAIIPLYAIGLLSSYVASRYITVFFNGQSRGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + GF +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVLIFSVLVILAHCYYGFRAQGGPAGVGVAVGRSVRNAIVLISVTDFFL 253 Query: 365 AI 366 ++ Sbjct: 254 SL 255 >gi|188995184|ref|YP_001929436.1| hypothetical protein PGN_1320 [Porphyromonas gingivalis ATCC 33277] gi|188594864|dbj|BAG33839.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 217 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 1/207 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +++ LI+++ +GV V +VI+ISF GAVI Q + Sbjct: 6 LQQIGEYTKLMQRTFSLPNRWRMSFRELIKEIDKLGVDSVWIVIIISFFIGAVITIQLSL 65 Query: 189 QLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 ++ F + L E + +++AG+ GS+I +E+G+M++ E+IDA+ + Sbjct: 66 NMTSPLIPRFTIGYSTREIILLEFSSTVMCLILAGKVGSSIASELGTMRVTEQIDAMEVI 125 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G++ LI P+I ++ +P+L+I++ + I+G + ++P + F + Sbjct: 126 GVNSANYLILPKIIGFMLFVPVLSIISMSTGIVGGYLACSLVPNLPRSDFEYGLQLFFSP 185 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFA 334 N+F +IK+ A I VA G+ Sbjct: 186 YNVFYSIIKSVAYAFIISSVAGYYGYT 212 >gi|311744212|ref|ZP_07718016.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311312385|gb|EFQ82298.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 279 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 10/257 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYK----FKGFLLSLIRQMYY------VGVSGV 168 F+ + + LG + + A + + ++ + + ++ + V V Sbjct: 9 RAFVTERRRRVETLGDQLIFYVKALAWTPRTVRLYRKEISKTLAEVVFGVGGISVIAGTV 68 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 V+ ++F G + G LS+ G F+ + + RE+ L+ A+ +A G Sbjct: 69 GVIAFLAFFAGTGVGLNGYAALSEIGVAKFTAFISAYFNTREVAPLVAAIALAATVGCGY 128 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A +G+M+I+EEIDA+ MG+ + L++ R+ A I++ L +A ++ + ++ Sbjct: 129 TARLGAMRISEEIDALEVMGVPSLPFLVTTRMIAAFIAVIPLYSVALVASYLAPRLITTL 188 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 Y + F +I K +A I ++ G+ +G+ V Sbjct: 189 IYGESAGTYDHYFIQFLPPGDILWSFFKLAVLAVGIILIHCYYGYTASDGPAGVGRAVGR 248 Query: 349 CVVQSISIVIIIDSLFA 365 + SI V++ D Sbjct: 249 AIRTSIVFVVVTDFFLT 265 >gi|145222146|ref|YP_001132824.1| hypothetical protein Mflv_1554 [Mycobacterium gilvum PYR-GCK] gi|145214632|gb|ABP44036.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 237 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 93/230 (40%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + +++ + Q + + + +L++ ++A L + GA Sbjct: 1 MSLDTFVKTFRRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAAD 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ L+ Sbjct: 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A LL L + G + + F + L + IKA Sbjct: 121 PRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGSFINGLTVLTGLPELILAEIKA 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+V G V +G V VV + + +I+ + Sbjct: 181 LLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAI 230 >gi|239931479|ref|ZP_04688432.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439855|ref|ZP_06579245.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342750|gb|EFE69706.1| ABC-transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 268 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 101/244 (41%), Gaps = 10/244 (4%) Query: 133 GLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVI 182 G + + + +L + R + V + V+I ++ TG V+ Sbjct: 12 GDHLLFYARALLWIPRTLRRYLKEVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVV 71 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+D Sbjct: 72 GLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVD 131 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ MG+ + L++ RI A ++++ L + S+ + + V + + F Sbjct: 132 ALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRSVTVLFNGQSRGTYDHYFA 191 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + ++ ++K + + + G+ +G V V +I ++ + D Sbjct: 192 LFLSPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDF 251 Query: 363 LFAI 366 ++ Sbjct: 252 FLSL 255 >gi|315442434|ref|YP_004075313.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260737|gb|ADT97478.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + + +RQ ++ + V +L++ G ++ Q A Q GA Sbjct: 44 VRTLQWFFVDLFTGRFQWQEFVRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 103 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L A+++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 104 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + + + F + F S T ++ L+ Sbjct: 164 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFTTTGDMIVALV 223 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV+SI I+++++ + Y + Sbjct: 224 KAVIFGAIVAIVSCQKGMSTRGGPTGVANSVNAAVVESILILMVVNVAISQLYIML 279 >gi|291298383|ref|YP_003509661.1| hypothetical protein Snas_0857 [Stackebrandtia nassauensis DSM 44728] gi|290567603|gb|ADD40568.1| protein of unknown function DUF140 [Stackebrandtia nassauensis DSM 44728] Length = 262 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 86/194 (44%) Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++F TG + QG L+Q G F+ + + REI L+ + ++ G+ A++ Sbjct: 56 FLTFFTGTEVGLQGYQALNQVGTSAFTGFISAYFNTREIAPLVAGIALSATVGAGFTAQL 115 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M++NEE+DA+ MG+ + L++ R+ A + + L +LA S+ + V Y+ Sbjct: 116 GAMRVNEEVDALEVMGVRSLPYLVTTRMLAGLAACVPLYVLALLSSYVATRGVAIFYFGQ 175 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F + ++ K + + V G+ +G V V Sbjct: 176 SSGTYDHYFSTFLVPGDVLWSFGKVLCFSVIVIGVHCYYGYHASGGPAGVGVAVGRAVRT 235 Query: 353 SISIVIIIDSLFAI 366 +I V I+D ++ Sbjct: 236 AIVAVNIVDFFVSL 249 >gi|118469389|ref|YP_885535.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170676|gb|ABK71572.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 106/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + + IRQ ++ + V +L++ G ++ Q A Q GA Sbjct: 48 VRTVQYLFTELFTGRFQWQEFIRQGAFMASTAVVPTVLVALPIGVTLSIQFALLAGQVGA 107 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L AV++A GSAI A++GS K+ EE DA+ MG+ ++ L Sbjct: 108 TSLAGAASGLAVIRQAASLTAAVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRL 167 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F I + + + D F + F S AT ++ LI Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFIASFLFNVYFQDGAPGSFVATFASFATTGDMIVALI 227 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +V+ ++G + + V VV+SI ++++++ + Y + Sbjct: 228 KAVIFGAIVAVVSCQKGLSTVGGPTGVANSVNAAVVESILLLMVVNVAISQLYIML 283 >gi|296166535|ref|ZP_06848966.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898147|gb|EFG77722.1| membrane protein YrbE4A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 254 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 97/239 (40%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 A +G + ++++ L + Q + + + +L+S ++A Sbjct: 9 ARAVGGFFEMMIDTGRATFRRPFQLGEFLEQTWMIARVSLVPTLLVSIPFTVLVAFTLNI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G Sbjct: 69 LLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D V L+ PR+ A + LL L + G + + F + L Sbjct: 129 IDPVHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLR 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+V G V +G V VV + + +I+ + Sbjct: 189 ELVLAEVKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 247 >gi|317508867|ref|ZP_07966506.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC BAA-974] gi|316252828|gb|EFV12259.1| hypothetical protein HMPREF9336_02878 [Segniliparus rugosus ATCC BAA-974] Length = 315 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 109/259 (42%), Gaps = 4/259 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 +V I + S +G ++ + + + + Q ++ + Sbjct: 51 AVVGGIRQADSSLQTVGRLVVLSLHAFRFLAVDLIRLQHPWRETVSQCAFLIRVTATPAL 110 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 L+S G +++ Q + Q GA S + + +++ ++ A+++ G +GSA+ ++ Sbjct: 111 LMSVPFGVILSVQVNSLVKQIGAVSMSGAVGGMGVMQQGAPIVAALLLGGAAGSAVATDL 170 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+ I EEIDA+ MG++ VR L+SPR+ A++ PLL + F + ++ Sbjct: 171 GARSIREEIDAMLVMGINPVRRLVSPRLAAILFVAPLLCVFIIFMGLAAGYVIAIVGMSG 230 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + + F + A + ++ LIK+ ++A + G + + VV Sbjct: 231 TPGSYIASFSAFARVEDMAVALIKSLLFGVVAILIACQRGLETRGGARGVADAANASVVL 290 Query: 353 SISIVIIIDSLFAIFYFAI 371 + ++ ++ + I Sbjct: 291 GVISIVGMNLVLTELTTLI 309 >gi|134098920|ref|YP_001104581.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133911543|emb|CAM01656.1| putative ABC-transporter integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 243 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 56/237 (23%), Positives = 109/237 (45%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + + + ++ ++Q +++ + IL+S GAVI+ Q +Q G Sbjct: 1 MFALGLDVAVLMFRRPFQFREFVQQFWFIASVSITPAILVSIPFGAVISLQLGTLTAQIG 60 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A+ F+ + +++ ++T ++IAG GSAI A++GS I EEI A+ +G+ V+ Sbjct: 61 AKSFNGAASVLAVVQQASPIVTTLVIAGAGGSAICADLGSRTIREEIAAMEVLGVSPVQR 120 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 LI PR+ A +++ LL L + + G D + + F++ A L +++ Sbjct: 121 LIVPRVLAAVLTAMLLNGLVSVVGVAGGYFFNVIVQDGTPGAYLASFNALAQLPDLWVST 180 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA G+VA G S +G V VV + ++ ++++ Y + Sbjct: 181 FKALIFGFLAGVVAAYRGLNPRGGSKGVGDVVNQSVVITFLLLFFVNTVITALYLQL 237 >gi|300789440|ref|YP_003769731.1| ABC transporter permease [Amycolatopsis mediterranei U32] gi|299798954|gb|ADJ49329.1| ABC transport system permease protein [Amycolatopsis mediterranei U32] Length = 271 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 98/252 (38%), Gaps = 1/252 (0%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G ++ + L V + + + + +G + V++ + Sbjct: 8 GDRLFDLGDQLLFYVRALAAVPLAVTRYFREVVRLLAEVTFGSGALAVIG-GTIGVMVGL 66 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 TG + QG L+Q + L + REI L+ + ++ GS A++G+ Sbjct: 67 CVFTGVTVGLQGFSALNQINISAMTGFLTAYFNTREIAPLVAGLALSSTVGSGFTAQLGA 126 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+I+EEIDA+ M + + L++ RI A I++ L ++ + +G+ + ++ Sbjct: 127 MRISEEIDALEVMAVRSMPYLVTTRIVAGFIAIIPLYVIGLLISYLGSRLTTVVFFGQSG 186 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + F ++ K + + + G+ +G V V SI Sbjct: 187 GTYDHYFTLFLPPGDVLWSFGKVLVFSVGVILTHCFYGYRASGGPAGVGVAVGRAVRTSI 246 Query: 355 SIVIIIDSLFAI 366 ++ ++D ++ Sbjct: 247 VLISVLDLFLSL 258 >gi|169631675|ref|YP_001705324.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243642|emb|CAM64670.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 288 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 102/236 (43%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + I Q ++ S V +L++ G ++ Q A Q GA Sbjct: 47 VRAMQYMFSDIVHRAFPWREFIHQGAFMAGSAVVPTLLVAIPIGVTLSIQFALLAGQVGA 106 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EEIDA+ MG+ +R L Sbjct: 107 SSLAGAASGVAIVRQGASLVAAVLMASAVGSAITADLGSRTMREEIDAMEVMGVSVIRRL 166 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A ++ LT F + + + + F + F S + ++ L+ Sbjct: 167 VVPRVAAAVLVGVGLTGTTCFVGFLASYLFNVYFQHGAPGSFVATFASFTRVDDLVLALL 226 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IVA +G + V VV+SI ++++I+ L + Y + Sbjct: 227 KAILYGLIVAIVACDKGLTTKGGPAGVANSVNAAVVESILVLMLINVLVSQVYVMV 282 >gi|226361938|ref|YP_002779716.1| YrbE family protein [Rhodococcus opacus B4] gi|226240423|dbj|BAH50771.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 267 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 102/251 (40%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 K + + +G GE + K L+ Q +++ + +L++ Sbjct: 9 ATAKIASGVGTGLRAVGGFFELCGETFRAMAKRPFQWRELVLQSWFIVRVALLPTLLVAL 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 ++ L +FGA S + + +IG L+T +++AG +AI A++G+ Sbjct: 69 PFTVLVVFTLNILLVEFGAADLSGAGAGLGAVTQIGPLVTVLIVAGAGATAICADLGART 128 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I EEIDAIR +G+D ++ L+ PR+ A + LL L + G + ++ Sbjct: 129 IREEIDAIRVLGIDPIQRLVVPRVLASMFVAVLLNGLVITIGLTGGFLFSVYIQNVTPGA 188 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + S L + +KA G+VA G V S+G V VV + Sbjct: 189 YVSSLTFVTGLPEVIISEVKATLFGLIAGLVACHRGLTVKGGPKSVGDAVNETVVYAFMA 248 Query: 357 VIIIDSLFAIF 367 + ++ + Sbjct: 249 LFAVNVVVTAI 259 >gi|108801582|ref|YP_641779.1| hypothetical protein Mmcs_4619 [Mycobacterium sp. MCS] gi|119870736|ref|YP_940688.1| hypothetical protein Mkms_4707 [Mycobacterium sp. KMS] gi|108772001|gb|ABG10723.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119696825|gb|ABL93898.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 254 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 98/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + A +G + + + +++ + Q + + + +L++ ++ Sbjct: 3 EQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLV 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A L + GA S + + ++G ++T +++AG +AI A++G+ I EEID Sbjct: 63 AFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R +G+D ++ L+ PR+ A LL L + G + + F + Sbjct: 123 AMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFINGLT 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + IKA G+V G V +G V VV + + +I+ Sbjct: 183 VLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVINV 242 Query: 363 LFAIF 367 + Sbjct: 243 IMTAV 247 >gi|326331672|ref|ZP_08197960.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950471|gb|EGD42523.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 277 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 102/247 (41%), Gaps = 7/247 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY-----YVGVSGVPVVILISFVTG 179 S V+ ++ L + VG + V++L+S G Sbjct: 20 FGSFLTFSASVLLAVPATLVHH--WRTCLEHFSDICWGRGAIIVGGGTIGVMVLLSVSVG 77 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 + +G L G + + RE+G L+ A+ + + G A++G+M++NE Sbjct: 78 TSLGIEGFNGLELVGLAPLVGFISATANTRELGPLVAALALGAQVGCRFTAQLGAMRVNE 137 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 E+DA+ M + V L++ R+ A ++++ L ++ + I + + + F Sbjct: 138 EVDALEVMSVRPVNYLVATRLVATMLAIVPLYVIGLLGSYIASESTVVMLFGQSPGQFDH 197 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 F T+ +I LIK A + ++ G AV S ++G+ + S ++++ Sbjct: 198 YFLEFLTMRDIGFSLIKILIFAAIVVLIHCWYGLAVSAGSLNVGEATGRSIRASFVVIVV 257 Query: 360 IDSLFAI 366 ++ L + Sbjct: 258 LNMLLTV 264 >gi|262201204|ref|YP_003272412.1| hypothetical protein Gbro_1221 [Gordonia bronchialis DSM 43247] gi|262084551|gb|ACY20519.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 349 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 89/195 (45%) Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G ++ Q ++Q GA+ +++ L +++ G SAI A++G+ Sbjct: 148 IPLGIIVTVQIGNIINQLGAQSLLGAGSGFAVIQQAAPLAAGMLLGGAGASAIAADLGAR 207 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + EEIDA+RTMG+D V L+ PR+ A ++ PL+ + ++ A + + D+ Sbjct: 208 TVREEIDAMRTMGIDPVARLVVPRVLAAVVVAPLIALFIVLVGVLSAYYLAITFQDVGPG 267 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ F S +++ +IF L KA I +V + G + V VV S Sbjct: 268 SYWQSFGSFSSVRDIFLALFKAVVFGFIIAVVGCQRGLEARGGPRGVADGVNATVVVSTV 327 Query: 356 IVIIIDSLFAIFYFA 370 +I ++ + + Y Sbjct: 328 GIIGVNLVLTLVYTV 342 >gi|302560791|ref|ZP_07313133.1| ABC-transporter integral membrane protein [Streptomyces griseoflavus Tu4000] gi|302478409|gb|EFL41502.1| ABC-transporter integral membrane protein [Streptomyces griseoflavus Tu4000] Length = 268 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 10/244 (4%) Query: 133 GLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVI 182 G + + +L + R + V + V+I ++ TG V+ Sbjct: 12 GDHLLFYARALLWVPRTLHRYLREVQRLLAEVAFGSGGLGVIGGTIGVMIAMTLFTGTVV 71 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+D Sbjct: 72 GLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVD 131 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ MG+ + L++ RI A ++++ L + S+ + + V + + F Sbjct: 132 ALEGMGIRSMPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFA 191 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + ++ ++K + + + G+ +G V V +I ++ + D Sbjct: 192 LFLSPTDVLLSVLKVLIFSVMVILAHCYYGYRATGGPAGVGVAVGRSVRNAIVLISVTDF 251 Query: 363 LFAI 366 ++ Sbjct: 252 FLSL 255 >gi|326333295|ref|ZP_08199542.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325948939|gb|EGD41032.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 267 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 102/250 (40%), Gaps = 10/250 (4%) Query: 127 SQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG---------VPVVILISF 176 S LG ++ + + F + ++R + V + V V+ ++ Sbjct: 6 SALRELGEQLAFHARAYSHVPHAFHRYRKEVVRLLAEVAMGTGALALIGGTVLVIGFLTA 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +G + Q G S + RE+ ++ + + G+ A+IG+M+ Sbjct: 66 ASGIEVGLQAYTSFDNIGVSALSGFFSAYFNTREVAPIIAGIALTATVGAGFTAQIGAMR 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++EEIDA+ M + V L++ RI A +I++ L +A + +V+ YD Sbjct: 126 VSEEIDALEVMAVPPVPYLVTTRIMAGLIAVIPLYAIAVMMCWLATRLVVTVGYDEAPGT 185 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + F + ++F ++K MA + V GF +G+ V V ++ Sbjct: 186 YQHYFDTFLIPGDLFLSMLKVTIMALVVVSVCCYHGFKAAGGPAGVGRAVGRAVRSALIA 245 Query: 357 VIIIDSLFAI 366 ++ +D +F I Sbjct: 246 IMFVDLIFGI 255 >gi|169628107|ref|YP_001701756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240074|emb|CAM61102.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 106/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ + + V VIL++ G ++ Q A Q GA Sbjct: 44 VRTIQWFFVDLFTGNFQWQEFVRQGAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGA 103 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + I +R+ L+ A++++ GSAI A++GS + EE DA+ MG+ +R L Sbjct: 104 TSLAGAASGIAIIRQAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F +GA + + + F + F + AT ++ LI Sbjct: 164 VVPRFAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALI 223 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +VA ++G + + V VV+SI +++ ++ + Y + Sbjct: 224 KAVIYGAIVAVVACQKGLSTKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMM 279 >gi|120406152|ref|YP_955981.1| hypothetical protein Mvan_5204 [Mycobacterium vanbaalenii PYR-1] gi|119958970|gb|ABM15975.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 237 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 93/230 (40%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + +++ + Q + + + +L++ ++A L + GA Sbjct: 1 MSLDTFVKTFRRPFQFREFLEQTWMIARVSLVPTLLVAIPFTVLVAFTLNILLREIGAAD 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ L+ Sbjct: 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A LL L + G + + F + L + IKA Sbjct: 121 PRVLASTFVALLLNGLVCLIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLGELVLAEIKA 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+V G V +G V VV + + +I+ + Sbjct: 181 LLFGVVAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVIMTAV 230 >gi|271964524|ref|YP_003338720.1| resistance to organic solvents ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507699|gb|ACZ85977.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Streptosporangium roseum DSM 43021] Length = 269 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 104/249 (41%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + S +G + E ++ + + I+Q +++ V+L+S GA Sbjct: 13 LVRRSTDVFGRVGDMSVIALEGFRRTWDVRTWFWEYIQQCWFLARVTSLPVLLVSLPLGA 72 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +A Q Q GA + + + +RE+ + +A++IAG GSA+ ++IG+ I +E Sbjct: 73 TVALQVGQLAWQLGASSATGGAVVVGLVREVAPMASALLIAGAGGSAMTSDIGARNIRDE 132 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 + A+ M ++ + L++PR+WA LL L + G + +F Sbjct: 133 LAAMEVMAVNPIHRLVTPRLWAASTVAVLLVPLVIVAGAGGGYFFNVVIQGVTPGAYFDG 192 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 S +++ L KA I++ G +G+ V V + +V + Sbjct: 193 AVSLLVTSDLLVTLFKAWIFGFIAAIMSCYFGMTCQTSPVGVGRAVNQSTVVTFMLVFAV 252 Query: 361 DSLFAIFYF 369 + + + YF Sbjct: 253 NYVITMIYF 261 >gi|119717050|ref|YP_924015.1| hypothetical protein Noca_2826 [Nocardioides sp. JS614] gi|119537711|gb|ABL82328.1| protein of unknown function DUF140 [Nocardioides sp. JS614] Length = 257 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 110/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + E + L + Q +++ + IL+S GAVI+ Q Q Sbjct: 13 GEIAVMVVEVTKRMFTRPFQLREFVEQAWFITSVTLMPTILVSIPFGAVISLQVGNLTGQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +RE + A++IAG +GSAI +++G+ KI EEIDA+ +G+D + Sbjct: 73 LGAQSFAGATAVLAVVREAAPIAAALIIAGAAGSAICSDMGARKIREEIDAMEVLGVDPL 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 LI PR+ A + ++ + + I G F S F + A+L +++ Sbjct: 133 ERLIVPRVVATMFVALMINGIVIGAGIGGGYFFTVIVQGGSAGAFLSSFTALASLPDLYI 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +IKA IV +G G + +G+ V V+ + ++ ++++ YF + Sbjct: 193 SMIKAVVFGWLAAIVGSYKGLNAGGGPSGVGRAVNESVIVAFMLLFFLNAVITAIYFQV 251 >gi|331699195|ref|YP_004335434.1| hypothetical protein Psed_5448 [Pseudonocardia dioxanivorans CB1190] gi|326953884|gb|AEA27581.1| protein of unknown function DUF140 [Pseudonocardia dioxanivorans CB1190] Length = 280 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 107/268 (39%), Gaps = 10/268 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGV 168 + G + + + Q LG +S A + + + + R + V Sbjct: 1 MSTAFGTRTRRALRGPLDQLAELGDQLSLYARAIAWIPRTVRRYRGEIARLLAEVSFGSG 60 Query: 169 PVVILI---------SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 +++++ S G+++ QG L G E + + + R+I L+ A Sbjct: 61 ALIVILGTAGVMAALSLFVGSLVGLQGFRALDSLGVEALTGFITAYFNTRDIAPLVAASA 120 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 + G+ A++G+M+I+EE+DA+ M + V L++ R+ A +I++ + + ++ Sbjct: 121 LTATLGAGFTAQLGAMRISEEVDALEVMAVPSVPFLVTTRVIAGMIAVIPMYTIGLLASF 180 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 + + + + +P + F ++++ +K + I ++ G+ Sbjct: 181 VASRLNVTVVNGLPGGTYDHYFDLFLPVSDVLFSYLKVIVFSVVIILIHCHYGYRAKGGP 240 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +G V V SI ++D + Sbjct: 241 AGVGVAVGRAVRLSIVSTAVLDFFLTLV 268 >gi|226304401|ref|YP_002764359.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183516|dbj|BAH31620.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 269 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L + Q ++G +L+ G IA Sbjct: 16 ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 76 SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D + L++PR+ A +I L + F +I + +P F + F Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ L+KA A +VA +G + V VV + ++V I++++ Sbjct: 196 GRSSDFVMALVKAAIFGLASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255 Query: 365 AIFYFAI 371 + Y I Sbjct: 256 SALYTVI 262 >gi|126437566|ref|YP_001073257.1| hypothetical protein Mjls_5002 [Mycobacterium sp. JLS] gi|126237366|gb|ABO00767.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 254 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 98/247 (39%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I + A +G + + + ++ + Q + + + +L++ Sbjct: 1 MIEQLAAPARAVGGFVDMSIDTFVKMFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTV 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L + GA S + + ++G ++T +++AG +AI A++G+ I EE Sbjct: 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D ++ L+ PR+ A LL L + G + + F + Sbjct: 121 IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + IKA G+V G V +G V VV + + +I Sbjct: 181 LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI 240 Query: 361 DSLFAIF 367 + + Sbjct: 241 NVIMTAV 247 >gi|41406660|ref|NP_959496.1| hypothetical protein MAP0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465663|ref|YP_879935.1| hypothetical protein MAV_0655 [Mycobacterium avium 104] gi|254773611|ref|ZP_05215127.1| hypothetical protein MaviaA2_02900 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395009|gb|AAS02879.1| hypothetical protein MAP_0562 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166950|gb|ABK67847.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 254 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 97/247 (39%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 I A +G + ++++ + Q + + + +L+S Sbjct: 1 MIEQLAVPARAVGGFFEMMIDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTV 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++A L + GA S + + ++G ++T +++AG +AI A++G+ I EE Sbjct: 61 LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+R +G+D + L+ PR+ A + LL L + G + + F + Sbjct: 121 IDAMRVLGIDPIHRLVVPRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFING 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 L + +KA G+V G V +G V VV + + +I Sbjct: 181 LTVLTGLRELVLAEVKALLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVI 240 Query: 361 DSLFAIF 367 + + Sbjct: 241 NVVMTAI 247 >gi|125591222|gb|EAZ31572.1| hypothetical protein OsJ_15716 [Oryza sativa Japonica Group] Length = 322 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 91/236 (38%), Gaps = 23/236 (9%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ + +L+ Q+ VG V +L + G Q + ++ G Sbjct: 99 ALLLAGQVFHRVLTGRVHRRNLLAQLRRVGPGSARVSLLTAAFVGMAFTIQFVREFTRLG 158 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 ++++ RE+ ++E+ D +R +G V Sbjct: 159 LHRSVDSVLALALSRELSP-----------------------VSEQTDTLRVLGAQPVDY 195 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A +++LP+LT+++ + ++ + + + ++ ++ + L Sbjct: 196 LVVPRVVACVLALPVLTLMSFALGLASSAFLADSIFGVSTSIILESARRALRPWDLISSL 255 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +K+ I +V+ G + +G+ T+ VV S+ + + D + +F Sbjct: 256 LKSQVFGAIIAVVSCAWGVTTHGGAKGVGESTTSAVVVSLVGIFVADFALSCLFFQ 311 >gi|54027606|ref|YP_121848.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54019114|dbj|BAD60484.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 108/282 (38%), Gaps = 8/282 (2%) Query: 85 ISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCA 144 +S T+ + Q + +L IG ++ F+ S L Sbjct: 1 MSSTYVPPLLRPLQQLKRSAQAPVDLIARIGHQVFFFLRSVGSIPLALKQYPKEVWRLLT 60 Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 G L+ + VV+++S G + QG L+ G + + + Sbjct: 61 DVTWGNGNLVVG--------GGTIGVVVILSAFGGMTVGIQGHTSLNLLGLSPITGAISA 112 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 RE+G LL ++ A ++G A++G+M+I+EEIDA+ ++ + + L+S R++A I Sbjct: 113 FATTRELGPLLASLAFAAQAGCRFTAQLGAMRISEEIDALESVAIRPLPYLVSTRMFAAI 172 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 +++ L L A I ++ + D + F+ ++ L+KA Sbjct: 173 VAIVPLYCLGLAVAYISCALTVQLVGDTAEGTYQHYFYQFLIPTDVLYSLLKAILFVAIT 232 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + GF +G + I +V+ D + Sbjct: 233 TFIQCYYGFFASGGPEGVGVAAGRAIKMCIILVVFADLFMTL 274 >gi|229494168|ref|ZP_04387931.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318530|gb|EEN84388.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 269 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L + Q ++G +L+ G IA Sbjct: 16 ALQGGYLIGFSVQALFGLFTAILRRRLSLHETVTQTLFIGRVSTGPSLLLMIPIGVFIAV 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 76 SVGELAGRIGAGGYSGAVVAFIIVGQAAALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D + L++PR+ A +I L + F +I + +P F + F Sbjct: 136 EVMGIDVIERLVAPRLVAAVIVSLALCSMVTFGGVIACYLYHIYVQHLPAGTFMATFSQY 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ L+KA A +VA +G + V VV + ++V I++++ Sbjct: 196 GRSSDFVMALVKAAVFGIASTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFIVNTVL 255 Query: 365 AIFYFAI 371 + Y I Sbjct: 256 SALYTVI 262 >gi|117164592|emb|CAJ88138.1| putative ABC-transporter integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 268 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 99/242 (40%), Gaps = 9/242 (3%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL---------ISFVTGAVIAQ 184 ++ +L + R + V + ++ ++ TG V+ Sbjct: 14 QLLFYVRSLLWIPRTLHRYLREVQRLLAEVAFGTGGLGVVGGTIGVMIAMTLFTGTVVGL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 QG L Q G F+ + + REI L+ + ++ G+ A++G+M+INEE+DA+ Sbjct: 74 QGYAALDQIGTAAFTGFVSAYFNTREIAPLVAGLALSATVGAGFTAQLGAMRINEEVDAL 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 134 EGMGIRSLPYLVTTRIIAGVVAIIPLYAIGLLSSYLASRYVTVLFNGQSRGTYDHYFNLF 193 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ ++K + + + G+ +G V V +I ++ + D Sbjct: 194 LSPTDVLLSVLKVFIFSVMVIVAHCYYGYRASGGPAGVGTAVGRSVRNAIVLISVTDFFL 253 Query: 365 AI 366 ++ Sbjct: 254 SL 255 >gi|118463749|ref|YP_880207.1| TrnB1 protein [Mycobacterium avium 104] gi|118165036|gb|ABK65933.1| TrnB1 protein [Mycobacterium avium 104] Length = 272 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 110/262 (41%), Gaps = 1/262 (0%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + + G ++ D +G + + + + ++ + Q ++V Sbjct: 4 LRAERWSTGLPALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARV 63 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +L++ +++ L + GA S + + ++G L+T +++AG + Sbjct: 64 SLAPTLLVAIPFTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGAT 123 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ A++GS I EEIDA+ +G++ ++ L++PR+ A + LL L ++G + Sbjct: 124 AMCADLGSRTIREEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFS 183 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKK 345 D+ F + + + IKA G+VA G + G + ++G Sbjct: 184 VFVQDVNPGAFAAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNA 243 Query: 346 VTTCVVQSISIVIIIDSLFAIF 367 V VV + + +++ + Sbjct: 244 VNETVVYAFMSLFVVNVVVTAI 265 >gi|294632698|ref|ZP_06711257.1| ABC-transporter integral membrane protein [Streptomyces sp. e14] gi|292830479|gb|EFF88829.1| ABC-transporter integral membrane protein [Streptomyces sp. e14] Length = 268 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 102/244 (41%), Gaps = 10/244 (4%) Query: 133 GLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVP---------VVILISFVTGAVI 182 G + + + +L + R + V V+I ++ TG V+ Sbjct: 12 GERMIFYVRAVFWVPRTLRRYLKEVRRLLAEVAFGTGGLGVIGGTIGVMIGMTLFTGTVV 71 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 QG L Q G F+ + + REI L++ + ++ G+ A++G+M+INEE+D Sbjct: 72 GLQGYAALDQIGTAAFTGFVSAYFNTREIAPLVSGLALSATVGAGFTAQLGAMRINEEVD 131 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ MG+ + L++ RI A ++++ L + S+ + + V + + F+ Sbjct: 132 ALEAMGIRSLPYLVTTRIIAGVVAIVPLYAIGLLSSYLASRAVTVMFQGQSRGTYDHYFN 191 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + ++ ++K + + I G+ +G V V +I ++ + D Sbjct: 192 LFLSPTDVLLSVLKVLIFSVIVIIAHCYHGYHAHGGPAGVGVAVGRSVRNAIVLIALTDF 251 Query: 363 LFAI 366 ++ Sbjct: 252 FLSL 255 >gi|289642564|ref|ZP_06474707.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289507652|gb|EFD28608.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 285 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 2/260 (0%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 +G + LG K + + + RQ + +S ++ Sbjct: 18 VRVGGSTSDAYGGGQALVTDLGEAALFAVRAFRDIPKTRRYASEVFRQTGIIILSSSGII 77 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + + A I+ +G + L Q GA ++ ++ + + ++A + G +VAE Sbjct: 78 WFMMAMLAAEISLEGHYLLRQLGAGGYTAVFTAVSDYT-VAPEMWGWILAAKVGCGLVAE 136 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +GSM+I+EEIDA+ MGLD + L+S R+ A+II P + I I ++ + Sbjct: 137 LGSMRISEEIDALEVMGLDSMSYLVSARLLAVIIVTPFMFIAGTGIMYIVNYVLNVHVFH 196 Query: 292 -IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + + S F + T ++ L+ M I ++ G+ +GK + Sbjct: 197 SVTQGAYLSVFWTFLTQTDVLLSLVAGGIMGTMIVLIGCFYGYTASGGPVGVGKNTAKSM 256 Query: 351 VQSISIVIIIDSLFAIFYFA 370 V ++ IV ++ ++F +F Sbjct: 257 VINLIIVSVVGAIFQQLFFG 276 >gi|15843113|ref|NP_338150.1| hypothetical protein MT3605 [Mycobacterium tuberculosis CDC1551] gi|13883459|gb|AAK47964.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 237 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 94/230 (40%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + ++++ + Q + V + +L+S ++A L + GA Sbjct: 1 MSMDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ L+ Sbjct: 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A + LL L + G + F + L + IKA Sbjct: 121 PRVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKA 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+V G V +G V VV + + +I+ + Sbjct: 181 LLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230 >gi|169631674|ref|YP_001705323.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243641|emb|CAM64669.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 286 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 102/269 (37%), Gaps = 4/269 (1%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK--FKGFLLSLIRQ-MYYVG 164 G++I + I I++ K F+ G Sbjct: 11 VQPIIDAGQRIAQSIRRLGHMLAFFVEAIASIPNALRYYSKEFFRLLADVTWGNGSLVTG 70 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V ++ GA+I + L+ G + + S++ RE+ ++ A+ A ++ Sbjct: 71 GGTVGVAAVLGATIGALIGIEAYNLLNIIGLGPATGFISSLVSTRELAPVMAALAFAMQA 130 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA-IIGAS 283 G A++G+ +INEEIDA+ + + + L++ R+ A +++ L +L + I Sbjct: 131 GCRFTAQLGAQRINEEIDALDALAIRPIPYLVTTRLLASTVAVVPLYLLCLVISYITCRL 190 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 +V + F + ++ +IKA + GF +G Sbjct: 191 LVGISSGGSIGGAYNHYFTMMLSGTDVVYSVIKAVVFVWIASTIQCYFGFNASGGPEGVG 250 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +I++VII++ L + + + Sbjct: 251 VAAGHAMRAAITVVIIVNMLLTMALWGVD 279 >gi|183984957|ref|YP_001853248.1| membrane protein YrbE4A [Mycobacterium marinum M] gi|183178283|gb|ACC43393.1| conserved membrane protein YrbE4A [Mycobacterium marinum M] Length = 237 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 94/230 (40%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + ++++ + Q + V + +L+S ++A L + GA Sbjct: 1 MSIDTARAAFRRPFQFREFLDQTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ L+ Sbjct: 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A + LL L + G + F + L + IKA Sbjct: 121 PRVLASTVVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEIKA 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+V G V +G V VV + + +I+ + Sbjct: 181 LLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230 >gi|226361937|ref|YP_002779715.1| YrbE family protein [Rhodococcus opacus B4] gi|226240422|dbj|BAH50770.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 110/257 (42%), Gaps = 15/257 (5%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VP 169 V+ + QA G I +S K +R + +G+ V Sbjct: 23 VRILKAIGHQADFFGKTIRLAPHAISSYKK------ETVRLIAEIGMGSGAMAIIGGTVV 76 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ G ++A QG L G E + + + +R + +++ + +A G+ Sbjct: 77 IVGFMTLSGGTLLAIQGFSSLGNIGVEALTGFFAAFINVRIVAPVISGIALAATIGAGAT 136 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+I+EEIDA+ MG+ + L+S R+ A +IS+ L +A + + + Sbjct: 137 AQLGAMRISEEIDALEVMGIRSMSYLVSTRLIAGMISIVPLYSMAVIMSFVASQFTTTYV 196 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y V+ F + ++F ++A MA + ++ G+ +G+ V Sbjct: 197 YGQSSGVYDHYFTTFLRPTDLFWSFLQAVVMALVVMLIHCYYGYHARGGPAGVGEAVGRA 256 Query: 350 VVQSISIVIIIDSLFAI 366 V S+ V+ + + ++ Sbjct: 257 VRTSLIAVVSVTLIASL 273 >gi|296167380|ref|ZP_06849782.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897324|gb|EFG76928.1| integral membrane protein YrbE1A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 271 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 100/247 (40%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + ++G + +++ + Q +++ I++S Sbjct: 17 LRDQLQTPLTVIGGFFRMCVLTGRALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTV 76 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++ L+QFGA S +I + ++G L T +++AG +AI A++G+ I EE Sbjct: 77 LLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 136 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ +G+D + L+ PR+ A + LL L ++G + ++ + + Sbjct: 137 IDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLAT 196 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + L + +KA G+V G V S LG V VV + + + Sbjct: 197 LTTITGLPEVVIATVKAAIFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAV 256 Query: 361 DSLFAIF 367 + + Sbjct: 257 NVVLTTI 263 >gi|119386398|ref|YP_917453.1| hypothetical protein Pden_3690 [Paracoccus denitrificans PD1222] gi|119376993|gb|ABL71757.1| protein of unknown function DUF140 [Paracoccus denitrificans PD1222] Length = 252 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 3/248 (1%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + G V A + L RQ+ +G +PVV L + TGA Sbjct: 8 GRAAIGLTRMTGQVTIFAARGLARVGQHP---AELARQVVQIGWLSLPVVGLTALFTGAA 64 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 +A Q +F A +++I RE+G +L +M+A R SAI AE+G+M++ E+I Sbjct: 65 LALQIHSGGERFQAGDVVPAIVAIGMARELGPVLGGLMVAARVASAIAAELGTMRVTEQI 124 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ T+ D V L+SPR+WA ++ +P+L + + I+G ++ A++ S Sbjct: 125 DALVTLSTDPVGWLVSPRLWAALLCVPMLVGVGDVIGIMGGWLIGVNALGFNSAIYLSNS 184 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + ++ +GL+K + + G + +G+ T VV + ++ + Sbjct: 185 WAYLESWDVVSGLLKGAVFGLIVALSGCWFGMTAAGGAAGVGRATTNAVVAASVGILAAN 244 Query: 362 SLFAIFYF 369 +F Sbjct: 245 FALTGLFF 252 >gi|148263953|ref|YP_001230659.1| hypothetical protein Gura_1896 [Geobacter uraniireducens Rf4] gi|146397453|gb|ABQ26086.1| protein of unknown function DUF140 [Geobacter uraniireducens Rf4] Length = 258 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 3/258 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G+ I+ I D I+ N + ++Q+Y+ G+ + Sbjct: 1 MITALGRWIIYRILDLSDLVDIILQACINIPATIRYGRRP--VFTVFMKQVYFTGLEALK 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+++IS G VI Q L G EI + ++ + +RE+G LLTA+++ RSG+AI Sbjct: 59 VIVVISLTIGVVIITQI-ISLVGAGNEILTGKVLIWVVIRELGPLLTAIVVIARSGTAIA 117 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G MKIN EI++I ++G+ + LI PRI+ + ++ +LTI ++I G IV Sbjct: 118 TELGYMKINNEIESIESLGIPAGQYLIMPRIFGVTTAVMILTIYFEIASIFGGFIVASIG 177 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + +PF F ++ TL + + K+ F + K+G VG + + + T Sbjct: 178 WHVPFDRFSEGVFTSLTLKELGRSVAKSFFFGLFLSAACCKQGLGVGKSATQIPQAATKG 237 Query: 350 VVQSISIVIIIDSLFAIF 367 V+QS+ +V ++D + + Sbjct: 238 VMQSLFLVFLLDGIITVV 255 >gi|271964523|ref|YP_003338719.1| resistance to organic solvents ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507698|gb|ACZ85976.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Streptosporangium roseum DSM 43021] Length = 288 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 103/210 (49%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G V V ++F GA + QG L GAE F + S +REI ++ AV +A Sbjct: 72 IGGGMVFVAFTMAFAVGATVGLQGYQGLQAIGAESFIGLVGSFANVREITPIIAAVALAA 131 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + GS+ AE+G+M+I+EEIDA+ M ++ LI R+ A +I+L + ++A F++ Sbjct: 132 QVGSSFTAELGAMRISEEIDALEVMAINAFTYLICTRVVAALIALVPVYLIALFASFFAT 191 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 ++ + + V+ F+ L +I +IK A A+ + GF + Sbjct: 192 RLMCTVLFGMSPGVYDYYFYLGLPLIDIVYSVIKVIVFAFAVISIHCYYGFNATGGPVGV 251 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 G + QSI VI+++ L + ++ G Sbjct: 252 GTAAGRAIRQSIVTVILLNLLLSYLFWGNG 281 >gi|326330430|ref|ZP_08196738.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325951705|gb|EGD43737.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 108/253 (42%), Gaps = 2/253 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + +D S LG + + S + + ++RQ + + ++ + + Sbjct: 27 MGGYSDGSSLIADLGGIALFGIQIVKSMPDVRHYGTEVLRQAGIIILKSTFIIWFMMCML 86 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 A IA + + L+Q GA ++ S + + +++ + +VAE+GSM+I+ Sbjct: 87 AAEIALEAHYLLAQLGAGGYTAVFSSTADYT-VAPEMWGWILSAKVACGLVAELGSMRIS 145 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD-IPFAVF 297 EEIDA+ MG+D L++ R+ A++I P + + I + + + + Sbjct: 146 EEIDALDVMGIDSRAYLVNTRVLAMVIVTPFMFVAGTGLMYILGYYMNVYLFHSVSAGGY 205 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 S F S ++ LI+A M I +V GF +GK +V ++ IV Sbjct: 206 LSVFWSFTAQQDLILSLIQATIMGLLIVLVGCYYGFNASGGPVGVGKATAKSMVINLVIV 265 Query: 358 IIIDSLFAIFYFA 370 + ++F +F Sbjct: 266 SALGAVFQQLFFG 278 >gi|326383821|ref|ZP_08205506.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395] gi|326197585|gb|EGD54774.1| YrbE family protein [Gordonia neofelifaecis NRRL B-59395] Length = 258 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 112/247 (45%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + H LG + G + +F+ L + Q ++G +L+ G IA Sbjct: 5 AVEAGHTLGFALQAIGSLFVAIARFRLSLSETLNQTVFIGRVSTGPSLLLMIPVGVFIAV 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 65 SVGELAGRIGAGGYSGAVVAFIIVGQASSLVCALMMAGVAGSAICTDLGSRKIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L++PRI A II +L L + + + +P F + F Sbjct: 125 EVMGVNILERLVAPRIAAAIIVALVLCSLITVTGVGACFLYHVYVQHLPAGSFMATFSQY 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 +++ L+K+ A IVA +G + + V VV + ++V + +++ Sbjct: 185 GRMSDFVMALVKSSIFALLATIVACFKGLHARGGPSGVADAVNEAVVIAFALVFVFNTVL 244 Query: 365 AIFYFAI 371 + Y + Sbjct: 245 SQLYAVM 251 >gi|289645180|ref|ZP_06477195.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289505005|gb|EFD26088.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 283 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 2/260 (0%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 G S LG + T + + ++RQ + +S ++ Sbjct: 16 TEAGTGSFGSYTGEGSLIRDLGEIARFTVTSVRRMPGVRHYGSEVLRQAGIMILSSSGII 75 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 + + A + +G + LSQ GA ++ S + + +++ + +VAE Sbjct: 76 WFMMGMLAAEASLEGHYLLSQLGAGSYTGVFTSTADYT-VAPEMWGWILSAKVACGLVAE 134 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +GSM+I+EEIDA+ MGLD LIS R+ A+II P + ++ ++ + Sbjct: 135 LGSMRISEEIDALEVMGLDPHSYLISTRLLAVIIITPFMFMIGTGIMYGVQYVLNVHVFH 194 Query: 292 -IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + + S F + T ++ L M I V G+ +GK + Sbjct: 195 SVSAGGYLSVFWAFQTQQDVLLSLAMGAIMGMMIVTVGCYYGYTASGGPVGVGKNTAKSM 254 Query: 351 VQSISIVIIIDSLFAIFYFA 370 V ++ IV ++ ++F +F Sbjct: 255 VINLVIVSVVGAVFQQMFFG 274 >gi|326383822|ref|ZP_08205507.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL B-59395] gi|326197586|gb|EGD54775.1| hypothetical protein SCNU_12842 [Gordonia neofelifaecis NRRL B-59395] Length = 286 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 106/260 (40%), Gaps = 10/260 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GV 165 + ++ + S G ++ + + + +IRQ+ V G Sbjct: 12 RGYRNRMDTAVSGLVRFGEYVTFVVRAVRAVPFTLIHYRKHVIRQIAEVTFGNKSLLSGG 71 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + +V+ +S A++ + L G S L +I RE+ ++ A+ +A + G Sbjct: 72 GTIGIVLAMSLAAAAMLGIETYRGLQLVGMTSMSGMLAAIANTRELAPVVVAIALAAKVG 131 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A+IG+M+I++EI A+ M + V L + R+ A ++ + + ++ ++ + +V Sbjct: 132 TGFTAQIGAMRISDEIAALDAMAIRSVPFLATTRMIAAMVCVLPIYMVGLLASYVATRLV 191 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + Y+ + FH T ++ KA A + +V G+ +G+ Sbjct: 192 VVWYHGESSGTYDYFFHLALTPTDLLYSATKAVVFAAIVTLVHCSYGYFASGGPEGVGQA 251 Query: 346 VTTCVVQSISIVIIIDSLFA 365 + SI + + D + Sbjct: 252 AGRALRTSILSIGVFDVILT 271 >gi|326383099|ref|ZP_08204788.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL B-59395] gi|326198235|gb|EGD55420.1| hypothetical protein SCNU_09181 [Gordonia neofelifaecis NRRL B-59395] Length = 246 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 95/230 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 + +G +S E ++ + Q + + + +L++ +++ Sbjct: 1 MNGVGEFVSLAVESARELFRRPFQWRETVEQSWAIARVSLVPTLLVAIPFTVLVSFTLNI 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA+ S ++ + +IG ++T +++AG +AI A++G+ I EEIDA+ +G Sbjct: 61 LLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREEIDALEVLG 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V L+ PR+ A LL L I G I D+ F + L Sbjct: 121 INPVHRLVVPRVIASTGVALLLNSLVCTIGIAGGFIFSVYLQDVNPGAFIANLTLLTGLG 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + +IKA G+V G V + +G V VV S + Sbjct: 181 ELVISMIKAALFGLFAGLVGCYRGLNVKGGAKGVGDAVNETVVYSFMALF 230 >gi|296141835|ref|YP_003649078.1| hypothetical protein Tpau_4170 [Tsukamurella paurometabola DSM 20162] gi|296029969|gb|ADG80739.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 113/275 (41%), Gaps = 3/275 (1%) Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS 155 + + + +I + + + A + + + + + + + Sbjct: 7 PTEAPARRPSDLRIFLDNIDRNALGPLRTLGRTAQL---ATTTVMAAISDTIRGRLAVKE 63 Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + Q +++ L++ G ++ Q + Q GAE + +++ L Sbjct: 64 TVIQAWFLVSVTAVPAFLMAIPFGVIVTIQVGGVVQQIGAESLLGAASGLAVIQQAAPLA 123 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +++ G SAI A++G+ I +E+DA+RTMG+D V L++PR+ A ++ PLL + Sbjct: 124 AGLLLGGAGASAIAADLGARTIRDEVDALRTMGIDPVHRLVAPRLIAAVVVAPLLNLFIV 183 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 I+ A V D+ ++ F + AT+ ++ ++KA I IV + G Sbjct: 184 VVGILAAFYVAVLGQDVTPGSYWLSFGAYATVRDLGFSMVKAALFGAIIAIVGCQHGLEA 243 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 + + V VV S +I+++ Y Sbjct: 244 KGGARGVADAVNATVVVSTVAIIVLNFALTQAYTV 278 >gi|254441414|ref|ZP_05054907.1| conserved domain protein [Octadecabacter antarcticus 307] gi|198251492|gb|EDY75807.1| conserved domain protein [Octadecabacter antarcticus 307] Length = 551 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 2/190 (1%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 IG + GL +S +F+ L +L+ Sbjct: 10 PAPVVAGGLIEWVADIGSSTTNAVKFVLKLIGYFGLFLSRLARSIRHPKEFR--LTALVH 67 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 VG+ VP+V L++F+ G V+A QG+ QL QFGAE+F +DL+++ LRE+G+LLT++ Sbjct: 68 HCQEVGLKAVPIVALMAFLIGVVLAFQGSTQLKQFGAEVFVVDLIAVYILRELGILLTSI 127 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 ++AGR+ SA A IGSMK+ EEIDA+R++GLD IL PRI AL++ LP+L ++AN Sbjct: 128 IVAGRTASAFTAAIGSMKMREEIDAMRSLGLDPATILFVPRILALVLMLPILGLVANVMG 187 Query: 279 IIGASIVIWK 288 + G + Sbjct: 188 LFGDPMAAQV 197 >gi|169628106|ref|YP_001701755.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240073|emb|CAM61101.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 109/267 (40%), Gaps = 10/267 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GV 165 + V N LG +++ A + + +R + + G Sbjct: 12 RPFVGIYNRVQKPVTRLGHMVAFFFRAIAGVPIVLRHYWKEFLRHLSDIAWGNGSLVVGG 71 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V+I++ + G ++A +G L G + + S++ RE+ ++ A+ A ++G Sbjct: 72 GTAGVMIVLGVIAGGLVAIEGYNFLDLLGLGPATGIISSLVNTRELAPIMAAIAFATQAG 131 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++G+M+I+EEIDA+ ++ + + L++ R+ A I+ L + + + ++ Sbjct: 132 CRFTAQLGAMRISEEIDAMDSIAIRPIPYLVTTRLMAAIVVTIPLYVACLAVSYLSCQVM 191 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F + +I +IKA + GF +G Sbjct: 192 VGIMSGGSIGSYLHYFGIGVSGIDIVYSVIKAIIFVWIASTIQCYYGFYASGGPEGVGVA 251 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +I++VIII+ L + +++ Sbjct: 252 AGHAMRAAITLVIIINMLLTMALWSVD 278 >gi|120401972|ref|YP_951801.1| hypothetical protein Mvan_0957 [Mycobacterium vanbaalenii PYR-1] gi|119954790|gb|ABM11795.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 106/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + + IRQ ++ + V +L++ G ++ Q A Q GA Sbjct: 40 VRTVQYFLLDLFSGRFQWQEFIRQGAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGA 99 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L A+++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 100 TSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 159 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + + + F + F S AT ++ L+ Sbjct: 160 VVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV 219 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +V+ ++G A + V VV+SI ++++++ + Y + Sbjct: 220 KAVIFGAIVAVVSCQKGLATQGGPTGVANSVNAAVVESILLLMVVNVAISQLYIMM 275 >gi|262201470|ref|YP_003272678.1| hypothetical protein Gbro_1508 [Gordonia bronchialis DSM 43247] gi|262084817|gb|ACY20785.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 286 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 100/253 (39%), Gaps = 10/253 (3%) Query: 123 NDSCSQAHILGLVISNTGEFC-ASSYKFKGFLLSLIRQMYYV---------GVSGVPVVI 172 +G ++ A + + ++ Q+ V G + +V+ Sbjct: 19 QQLTGGIVRIGEFVTFIARAIIAIPFTVVHYRKHVLNQIAEVTFGSKSLLSGGGTLGIVL 78 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 +S ++ + L G S L +I RE+ ++ + +A + G+ A++ Sbjct: 79 AMSLAAAMMLGVETYRGLQLVGMTSLSGMLSAIANSRELAPVVVGIALAAKVGTGFTAQV 138 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+I++EI A+ +M + + L + R+ A ++ + + ++ ++ I +V+ Y Sbjct: 139 GAMRISDEIAALDSMAIRSIPFLATTRMIAAMVCILPIYMVGLLASYIATRLVVVWYNGE 198 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + FH T ++ KA A + +V G+ +G+ + Sbjct: 199 SSGTYDYFFHLALTPTDLLYSATKAIVFAAIVALVHCSYGYFASGGPEGVGQAAGRALRT 258 Query: 353 SISIVIIIDSLFA 365 SI + I D +F Sbjct: 259 SILAIGIFDVIFT 271 >gi|296165200|ref|ZP_06847747.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899389|gb|EFG78848.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 103/254 (40%), Gaps = 6/254 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178 H+L + + +++G L L+ + VG V +++ Sbjct: 27 IIRLGHLLVFFVRALAAVPLALRQYRGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGVTV 86 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L+ G + + S++ RE+ L+ ++ A + G A++GSM+I Sbjct: 87 GALVGIEGYNFLNLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 146 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A ++++ L + +V+ + Sbjct: 147 EEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAIGYLSTQLVVGIGSGGSTGSYL 206 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F +I LIKA + G+ +G + SI++VI Sbjct: 207 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 266 Query: 359 IIDSLFAIFYFAIG 372 I++ L + + + Sbjct: 267 IVNMLLTMALWGVD 280 >gi|262203811|ref|YP_003275019.1| hypothetical protein Gbro_3952 [Gordonia bronchialis DSM 43247] gi|262087158|gb|ACY23126.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 254 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 96/238 (40%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + +G ++ + + + Q + + + +L++ Sbjct: 1 MLGKLATPLGGIGDFVALGVDSARELFHRPFQWRETVEQSWAIARVSMVPTLLVAIPFTV 60 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 +++ L + GA+ S ++ + +IG ++T +++AG +AI A++G+ I EE Sbjct: 61 LVSFTLNILLREIGAQDLSGAGAALGTITQIGPIVTVLIVAGAGATAICADLGARTIREE 120 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA++ +G++ + L+ PRI A LL L I G + D+ F + Sbjct: 121 IDAMKVLGINPIHRLVVPRIIASTGVAVLLNSLVCTIGIGGGFVFSVYLQDVNPGAFIAN 180 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++KA G+V +G V + +G V VV S + Sbjct: 181 LTLLTGFGELMISMVKAALFGLFAGMVGCYQGLNVKGGAKGVGDAVNETVVYSFMALF 238 >gi|189425024|ref|YP_001952201.1| hypothetical protein Glov_1965 [Geobacter lovleyi SZ] gi|189421283|gb|ACD95681.1| protein of unknown function DUF140 [Geobacter lovleyi SZ] Length = 270 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 3/264 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 IG +++ + ++ + + + + L++Q+Y+ G+ Sbjct: 9 FPERIGAFVLRRGQFFVTITRLILQSLVSLISPPSLGN--PAIRMVLLKQLYFTGLEAAK 66 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +++L++ + G VI Q L G ++ + E+G LLTA+++ RSG+AI Sbjct: 67 IIVLVAVILGTVIVSQV-IGLVGGGNGSLIGKVLVWVVFLELGPLLTAMIVIARSGTAIA 125 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 AE+G+MKIN EI A+ +G+D R L+ PR+ S+ LLTI ++ +G +++ Sbjct: 126 AELGAMKINGEIAALERLGIDPERYLLLPRVIGAATSVMLLTIYFVLTSFVGGFLIVSFG 185 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + I + F ++ + + + KA I ++ G +VG + + + T Sbjct: 186 HHISYDQFIQGIVASLGIREVVVLMAKAAAFGLIIPLICCNAGMSVGTSATEIPQAATRA 245 Query: 350 VVQSISIVIIIDSLFAIFYFAIGI 373 V+ S+ + ++D + + + Sbjct: 246 VITSLFSIFVLDGVITYLASLLAV 269 >gi|324997538|ref|ZP_08118650.1| hypothetical protein PseP1_02178 [Pseudonocardia sp. P1] Length = 246 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 8/245 (3%) Query: 128 QAHILGLVISNTGEF-CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 A +LG V+ + + L +++ ++ P+ + Q Sbjct: 1 MAELLGRVVYSAVRHPVGYWGDVRDQLFEVLKLCWF------PMAVACVAFGFGAPGLQA 54 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 FG + +RE + A+++AG G+A+ A++G+ +I EEIDA+ Sbjct: 55 GNLFILFGIPERLGSFFVMASVREFAPWINAMVVAGVVGTAMTADLGARRIREEIDAMEV 114 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +G+D VR LI PRI A+ I L+ ++A ++G + D A F F S AT Sbjct: 115 LGIDPVRALILPRIIAVTIMTGLMDLIALSFGVLGGYLAA-IQLDAGSAAFQQNFFSNAT 173 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 +++ ++K IG+V +GF +G+ V VV + + + + +F Sbjct: 174 TIDLWGSVLKTTLFGLIIGVVCCYKGFRAQGGPAGVGRAVNQAVVIAFAAIWSFNFVFTT 233 Query: 367 FYFAI 371 + Sbjct: 234 ILLGL 238 >gi|183980441|ref|YP_001848732.1| integral membrane protein YrbE1A [Mycobacterium marinum M] gi|183173767|gb|ACC38877.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium marinum M] Length = 267 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 1/259 (0%) Query: 110 LHYHIGKKIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 + G ++ ++ D ++G + ++ LI Q ++V + Sbjct: 1 MTTSSGPHLMGYLRDQLETPLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVAL 60 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 I++S ++ L+QFGA S +I + ++G L T +++AG +AI Sbjct: 61 LPTIMVSIPLTVLLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAI 120 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G+ I EEIDA+ +G+D + L+ PR+ A LL L ++G + Sbjct: 121 CADLGARTIREEIDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVY 180 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 +I + + + + + ++KA G+V G V S LG V Sbjct: 181 LQNINGGAYLATLTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNE 240 Query: 349 CVVQSISIVIIIDSLFAIF 367 VV + + ++ + Sbjct: 241 TVVLCVVALYAVNVILTTI 259 >gi|118616793|ref|YP_905125.1| integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99] gi|118568903|gb|ABL03654.1| conserved hypothetical integral membrane protein YrbE1A [Mycobacterium ulcerans Agy99] Length = 267 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 101/247 (40%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGA 180 + + ++G + ++ LI Q ++V + I++S Sbjct: 13 LRDQLETSLTMVGGFFRMCVLTGKALFRRPFQWRELILQCWFVMRVALLPTIMVSIPLTV 72 Query: 181 VIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEE 240 ++ L+QFGA S +I + ++G L T +++AG +AI A++G+ I EE Sbjct: 73 LLIFTLNVLLAQFGAADISGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREE 132 Query: 241 IDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSR 300 IDA+ +G+D + L+ PR+ A LL L ++G + +I + + Sbjct: 133 IDAMEVLGIDPIHRLVVPRVIAATFVATLLNALVITVGLVGGYLFGVYLQNINGGAYLAT 192 Query: 301 FHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII 360 + + + ++KA G+V G V S LG V VV + + + Sbjct: 193 LTTITGMPEVTIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALYAV 252 Query: 361 DSLFAIF 367 + + Sbjct: 253 NVILTTI 259 >gi|325673338|ref|ZP_08153030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325555928|gb|EGD25598.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 269 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L ++Q ++G +L+ G +A Sbjct: 16 ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 75 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 76 SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 135 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D V L++PR+ A ++ L + F ++ + +P F + F Sbjct: 136 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 195 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A+ L+KA A +VA +G + V VV + ++V ++++ Sbjct: 196 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 255 Query: 365 AIFYFAI 371 + Y I Sbjct: 256 SALYTVI 262 >gi|240168187|ref|ZP_04746846.1| integral membrane protein YrbE1A [Mycobacterium kansasii ATCC 12478] Length = 268 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 99/237 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + ++ I Q +++ + IL+S ++ Sbjct: 22 LTLVGGFFRMCVLTGKALFRRPFQWREFILQCWFIMRVALLPAILVSVPFTVLLIFTLNV 81 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+QFGA S +I + ++G +T +++AG +AI A++G+ I EEIDA+ +G Sbjct: 82 LLAQFGAADLSGAGAAIGAVTQLGPQVTVLVVAGAGSTAICADLGARTIREEIDAMEVLG 141 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A + LL L ++G + ++ + + + L Sbjct: 142 IDPIHRLVVPRVIAATLIATLLNALVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLP 201 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 + ++KA G+V G V S LG V VV + + ++ + Sbjct: 202 EVVIAMVKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVVALFAVNVVLT 258 >gi|108798492|ref|YP_638689.1| hypothetical protein Mmcs_1522 [Mycobacterium sp. MCS] gi|119867593|ref|YP_937545.1| hypothetical protein Mkms_1545 [Mycobacterium sp. KMS] gi|108768911|gb|ABG07633.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119693682|gb|ABL90755.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 271 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 106/239 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + + + + Q ++V + ++++ ++ Sbjct: 27 IRALGGFFAMALDTLVTIPRRPFAWREFLEQSWFVARVSLVPTLMLAIPFTVLLIFTFNI 86 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA F+ + + +IG ++T +++AG +A+ A++G+ I +E+DA+R MG Sbjct: 87 LLLEFGAADFAGTGAAYGTVTQIGPVVTVLVVAGAGATAMCADLGARTIRDELDALRVMG 146 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D ++ L+ PR+ A + LL+ + ++G + F S + A Sbjct: 147 VDPIQTLVVPRVLAATVVATLLSSVVILVGLVGGFAFSVFVQHVTPGAFISGLTVITSAA 206 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ LIKA A G++A +G +VG +G V VV + + I+ + + Sbjct: 207 DVVISLIKAALFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFVALFAINIIASAV 265 >gi|126436761|ref|YP_001072452.1| hypothetical protein Mjls_4189 [Mycobacterium sp. JLS] gi|126236561|gb|ABN99961.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 20/278 (7%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 H V +QA + E +R + +G Sbjct: 7 GPRFPGLTHRLDGWVAGWRRIGAQARFYAKTLGAMWEALVYYR------GETLRMIAQMG 60 Query: 165 VSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 + V +V ++ G+++ QG LS G E + + + + R + L Sbjct: 61 LGAGALAMIGGTVGIVGFLTLTAGSLVTIQGYSSLSDIGVEALTGFVSAYVNGRIVTPLT 120 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 + ++ G+ A++G+M+INEEIDA+ MG+ V L S R+ A +I + L +A Sbjct: 121 AVISLSATIGAGTTAQLGAMRINEEIDALEVMGIRSVAYLASTRVIAGVIVVIPLYCIAV 180 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + + + A YY ++ F + ++I L +A M + +V GF Sbjct: 181 WMSFMSARFATTVYYGQATGIYDHYFSTFLQPSDILWSLFQAVLMGFVVMLVHTYYGFTA 240 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +G+ V V S+ ++F I + ++ I Sbjct: 241 SGGPAGVGEAVGRAVRTSLIA-----AVFVILFASLAI 273 >gi|41409700|ref|NP_962536.1| hypothetical protein MAP3602 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398532|gb|AAS06152.1| hypothetical protein MAP_3602 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 271 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 1/256 (0%) Query: 113 HIGKKIVKFINDSCSQ-AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 G +V ++ D ++G + +++ + Q +++ Sbjct: 8 RRGPYLVGYLRDQLETPLTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPT 67 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 I++S ++ L+QFGA S +I + ++G L T +++AG +AI A+ Sbjct: 68 IMVSIPLTVLLIFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICAD 127 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+ I EEIDA+ +G+D + L+ PR+ A + LL L ++G + + Sbjct: 128 LGARTIREEIDAMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQN 187 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + + + L + +KA G+V G V S LG V VV Sbjct: 188 VSGGAYLATLTTITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVV 247 Query: 352 QSISIVIIIDSLFAIF 367 + + ++ + Sbjct: 248 LCVVALYAVNVVLTTI 263 >gi|169631592|ref|YP_001705241.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243559|emb|CAM64587.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 107/236 (45%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + + +RQ + + V VIL++ G ++ Q A Q GA Sbjct: 44 VRTLQWFFVDLFTGQFQWQEFVRQGAFQAATAVMPVILVTLPIGVTLSIQFALLAGQVGA 103 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + I +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 104 TSLAGAASGIAIIRQAASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 163 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F +GA + + F S F S AT ++ ++ Sbjct: 164 VVPRFAAAIMIAVALTAVVCFVGFLGAYLFNVYWQGGAPGSFVSTFASFATPDDMVLAVL 223 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +V+ ++G + + V VV+SI ++++++ + Y + Sbjct: 224 KAIIYGAIVAVVSCQKGLSTKGGPIGVANSVNAAVVESILLLMVVNVAISQLYIMM 279 >gi|226361226|ref|YP_002779004.1| YrbE family protein [Rhodococcus opacus B4] gi|226239711|dbj|BAH50059.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 291 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 102/265 (38%), Gaps = 7/265 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR-----QMY 161 +G+ I + ++ + K ++ + + Sbjct: 16 LLQPIRSVGRAATSVIEEIGQVTVFSVKTVALLPKTLRHYRKQTMTTMNNMAWGNGSLVV 75 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 GV + + + GAV+A Q G + + S +R I ++T + A Sbjct: 76 DGGVVSL--MFFLGLAVGAVVAIQAFMAFDLLGFGALTGIIGSFGNVRVIAPIITGIGFA 133 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 ++G + AEIGSM+I+EEIDA +MGL + ++ R+ ++ + ++A + Sbjct: 134 AQAGCRMTAEIGSMRISEEIDATESMGLQAIPFVVGTRLIGSMLIVIPGYLMALVVSFFT 193 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 ++I ++ P + F ++ ++ L+KA + ++ G+ Sbjct: 194 GGLIIKTFHRQPSGTYDHYFSQFLSVPDLMASLLKAVVFCAVVTMIHCYYGYFADGGPAG 253 Query: 342 LGKKVTTCVVQSISIVIIIDSLFAI 366 +G + S+ +++++ + Sbjct: 254 VGAASGRAIRASLVAIVVLNFCMTV 278 >gi|111023083|ref|YP_706055.1| ABC transporter membrane protein [Rhodococcus jostii RHA1] gi|110822613|gb|ABG97897.1| possible ABC transporter integral membrane protein [Rhodococcus jostii RHA1] Length = 269 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 104/242 (42%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G I+ T + K L+ Q + + +L+ G +IA Sbjct: 21 ALIGFSIATTVAAVRVLVRRKLAWRELLDQAWRLASVTSAPALLLMIPIGVLIAVTIGSL 80 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 Q GAE ++ ++ + + + L+ A+M+AG GSAI A++GS I EE++A+ +GL Sbjct: 81 AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 + + L+ PR+ A +I L + + + + F + L++ Sbjct: 141 NVIERLVVPRVLAAVIVGIALCAMVTAVGVSACFLFQVIVQNSSAGSFLTALSQYTRLSD 200 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+K+ A +VA +G + + V VV + +V I++++ + Y Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260 Query: 370 AI 371 + Sbjct: 261 VL 262 >gi|254822745|ref|ZP_05227746.1| hypothetical protein MintA_22639 [Mycobacterium intracellulare ATCC 13950] Length = 237 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 94/230 (40%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + ++++ + Q + + + +L+S ++A L + GA Sbjct: 1 MMMDTGRAAFRRPFQFGEFLDQTWMIARVSLVPTLLVSIPFTVLVAFTLNILLREIGAAD 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G+D ++ L+ Sbjct: 61 LSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVV 120 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR+ A + LL L + G + + F + L + +KA Sbjct: 121 PRVLASTVVALLLNGLVCAIGLSGGYVFSVFLQGVNPGAFINGLTVLTGLRELVLAEVKA 180 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G+V G V +G V VV + + +I+ + Sbjct: 181 LLFGVMAGMVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMTAI 230 >gi|54024947|ref|YP_119189.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54016455|dbj|BAD57825.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 7/283 (2%) Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEF----CASSYKFKGFL 153 + ++ S G + A + L Sbjct: 4 EYAPAAVWPPDSTDEQRASAVLVLRGRILSAVRTFGRTVRLGVRATVLAVADLAAGRFPL 63 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 + Q ++ + ILIS G VIA Q GA + + + +++I Sbjct: 64 REAVVQAWFFASVSLLPAILISLPMGVVIAVQVGSLTENVGAGSMAGAVGGMGVMQQIAP 123 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 L A+++ G SAI +++G+ I EEIDA+RTMG+D R L++PR+ A+ + P+L +L Sbjct: 124 LAAALLVGGAGASAIASDLGARTIREEIDALRTMGIDPHRRLVAPRVVAMTVVAPMLAVL 183 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 +I+ + +V + ++ F S A++ ++ L K+ + ++A + G Sbjct: 184 VILMSILASFLVASVGQGVAPGSYWLSFGSFASVTDLVICLGKSAVFGYLVAVIASQRGL 243 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA---IFYFAIGI 373 + V VV + ++++ + + + +G+ Sbjct: 244 QAQGGPKGVADCVNAAVVLGLLACLVVNLIITQIVLLFVPMGL 286 >gi|193215869|ref|YP_001997068.1| hypothetical protein Ctha_2170 [Chloroherpeton thalassium ATCC 35110] gi|193089346|gb|ACF14621.1| protein of unknown function DUF140 [Chloroherpeton thalassium ATCC 35110] Length = 264 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 3/247 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 +G+ + + + VI++ +F + L L+RQ+ + G + Sbjct: 7 FLEQLGQNVRSSLRAYITFLSFAAAVIASFPKFFKQTQ---VGYLVLLRQVLFTGYEALS 63 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V+LIS G +I +G L+ FG ++ + RE+ LLTA +I RSG+AI Sbjct: 64 IVVLISVSIGGLIILEGYSILANFGQSDLLYVILVSVITRELSNLLTAFIIVARSGTAIA 123 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G+M +N EIDA+ ++G+ + L+ PR +++SL +L + N + I+G +V + Sbjct: 124 TELGNMVVNHEIDALLSIGISPISYLVVPRTIGVVVSLLVLNVYFNITGILGGWMVSNWF 183 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y I F VFFS+ + TL +I ++K+ AI I++ G V S + ++ Sbjct: 184 YPIDFNVFFSKLLAKLTLVDISASILKSMLFGFAIAIISSFHGLQVNFASTEVPQRTIRA 243 Query: 350 VVQSISI 356 VV S+++ Sbjct: 244 VVYSLTM 250 >gi|41406855|ref|NP_959691.1| hypothetical protein MAP0757 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395205|gb|AAS03074.1| hypothetical protein MAP_0757 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 260 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ D +G + + + + ++ + Q ++V + +L++ Sbjct: 3 ALRLKVDMSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +++ L + GA S + + ++G L+T +++AG +A+ A++GS I Sbjct: 63 FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ +G++ ++ L++PR+ A + LL L ++G + D+ F Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356 + + + IKA G+VA G + G + ++G V VV + Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242 Query: 357 VIIIDSLFAIF 367 + +++ + Sbjct: 243 LFVVNVVVTAI 253 >gi|317508278|ref|ZP_07965958.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC BAA-974] gi|316253453|gb|EFV12843.1| hypothetical protein HMPREF9336_02330 [Segniliparus rugosus ATCC BAA-974] Length = 290 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 101/279 (36%), Gaps = 3/279 (1%) Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKG 151 + + + F GLV+ + + + Sbjct: 1 MTAPARYYPPIVAPLVRGVKAVVGIPLGFFERMGHVLTFFGLVLGAVPHTFRAYGRQIRE 60 Query: 152 FLLSLI--RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 L+ L VG + V+ ++ G VI + LS + + + R Sbjct: 61 TLIDLTWGNGRIIVGGGTLSVLAVLGLSIGGVIGLEAYNALSIVNLGPLTGFISAYGMTR 120 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E G L A+ A ++G I AE+G+M+I EEIDA+ G+ + +++ R+ A I + Sbjct: 121 EFGPLAAALGFAAQAGCRITAEVGAMRIAEEIDALEATGIRSIPFVVTTRVIAGIAVILP 180 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 + +L S+V+ + + F ++ LIK + IV Sbjct: 181 VYLLTLILGYEACSLVVNLLNNQSAGTYNYYFMRFLVPQDVVLSLIKTAIFIVVVVIVHG 240 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 +G+ +G + SI IV+I++ L + + Sbjct: 241 YQGYYASGGPEGVGLASGRAIRSSIVIVVILNMLLTLLF 279 >gi|319952306|ref|YP_004163573.1| hypothetical protein Celal_0740 [Cellulophaga algicola DSM 14237] gi|319420966|gb|ADV48075.1| protein of unknown function DUF140 [Cellulophaga algicola DSM 14237] Length = 245 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 2/246 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G E K++ +++++ + + ++I ISF G V+A Q Sbjct: 1 MNYLASIGSYFIMIREVFKKPTKWRIMKSLILKEIDELIYGSLGIIIFISFFIGGVVAIQ 60 Query: 186 GAFQLSQ-FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 A ++ + E T++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TALNMTNPLIPRNLIGFATRQSVILEFAPTFTSIIMAGKVGSYITSSIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + L+ P+I AL++ P +A + I G I A F Sbjct: 121 EVMGVNSLNYLVFPKIVALLL-YPFAIAIAMYVGIFGGWIAGVFGGFSTSADFVEGIQLD 179 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ IK A I + GF + + +GK TT V + ++II++ + Sbjct: 180 FIPFHVTYSFIKTIIFAFIIATIPSFHGFYMKGGALEVGKASTTSFVWTSVVIIIVNYVL 239 Query: 365 AIFYFA 370 Sbjct: 240 TQLLLG 245 >gi|254773835|ref|ZP_05215351.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 260 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ D +G + + + + ++ + Q ++V + +L++ Sbjct: 3 ALRLKVDVSGAMQAVGALFAMSADAVKYLFRRPFQWREFLEQSWFVARVSLAPTLLVAIP 62 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +++ L + GA S + + ++G L+T +++AG +A+ A++GS I Sbjct: 63 FTVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPLVTVLIVAGAGATAMCADLGSRTI 122 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 EEIDA+ +G++ ++ L++PR+ A + LL L ++G + D+ F Sbjct: 123 REEIDAMEVLGINPIQRLVTPRMLASGLVAFLLNSLVVIIGVLGGYVFSVFVQDVNPGAF 182 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISI 356 + + + IKA G+VA G + G + ++G V VV + Sbjct: 183 AAGITLLTGVPEVVISCIKAALFGLIAGLVACYRGLSITGGGAKAVGNAVNETVVYAFMS 242 Query: 357 VIIIDSLFAIF 367 + +++ + Sbjct: 243 LFVVNVVVTAI 253 >gi|261415551|ref|YP_003249234.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372007|gb|ACX74752.1| protein of unknown function DUF140 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 292 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 120/279 (43%), Gaps = 14/279 (5%) Query: 99 QRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIR 158 + L + +G I+K ++ L + S+ FK ++I Sbjct: 7 KNWQKMTPVGRLFHTLGIFILK-----TRMGQLIALFLRTVASLFDKSHNFKSDSRNIIL 61 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 Q ++ GV P + ++ + G V+ + + G L+ ++ +RE+ + TA Sbjct: 62 QTFFTGVEIFPPLFAVATLFGTVVIIYLFSLMGKMGFSNNIGFLIVVIIIRELSPIFTAF 121 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +IAGR+GS++ IGSM IN E+DA+ TMG++ +R L+ P + I++ ++ I+ + SA Sbjct: 122 LIAGRTGSSLTTYIGSMVINSEVDALATMGINPIRYLVMPSVIGGTIAMIIMNIIFSTSA 181 Query: 279 IIGASIVIWKYY---------DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 I ++ I ++ + T + ++K I I A Sbjct: 182 IGAGFLLTKGIIFITGNAPNVQITWSYLSTEIIKALTKPDFVFAIVKPLIFGIIITINAC 241 Query: 330 KEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + + + K + V+ S ++ D+LF +++ Sbjct: 242 YQALNIKRDIRQVPKATSRSVIMSFLYIVFTDALFLMYF 280 >gi|108800639|ref|YP_640836.1| hypothetical protein Mmcs_3673 [Mycobacterium sp. MCS] gi|119869778|ref|YP_939730.1| hypothetical protein Mkms_3746 [Mycobacterium sp. KMS] gi|108771058|gb|ABG09780.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695867|gb|ABL92940.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 270 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 1/245 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +G + + + + + ++ + Q ++V + +L++ + Sbjct: 17 VKNLAGPMAAVGGLFAMSADAIRNVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ L + GA S + + ++G L+T +++AG +A+ A++GS I EEI Sbjct: 77 VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ +G+D V+ L++PR+ A + LL L I+G D+ F + Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360 + + +KA G+VA G V G + ++G V VV + + I Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256 Query: 361 DSLFA 365 + L Sbjct: 257 NVLVT 261 >gi|183983838|ref|YP_001852129.1| integral ABC-type transport protein [Mycobacterium marinum M] gi|183177164|gb|ACC42274.1| conserved hypothetical integral ABC-type transport protein [Mycobacterium marinum M] Length = 287 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 110/274 (40%), Gaps = 10/274 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQM---- 160 I +++V+ + LG ++ A +++G L L+ + Sbjct: 7 RPLAPITEQVVRLYRRTTKPIIRLGHMLVFFFRALAGVPIAVRQYRGEFLRLLSNITWGN 66 Query: 161 --YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAV 218 VG V +++ GA++ +G L G + + S++ RE+ L+ ++ Sbjct: 67 GSIVVGGGTAGVAVVLGMTVGALLGIEGYNFLDLLGLGPATGLISSLVNTRELAPLMASL 126 Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 A ++G A++GSM+I EEIDA+ ++ + + L++ R+ A I+++ L Sbjct: 127 AFAMQAGCRFTAQLGSMRIAEEIDAMESIAIRPIPFLVTTRLVASIVAMIPLYAACLAIG 186 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 + +V+ + F +IF L+K + GF Sbjct: 187 YLTTQVVVGISSGGSTGSYLHYFSLMLAGQDIFYSLLKTVIFVWIASTIQCYYGFYASGG 246 Query: 339 SNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G + SI++VI+++ L + + + Sbjct: 247 PEGVGVAAGHGMRASITVVIMVNMLITMALWGVD 280 >gi|41407948|ref|NP_960784.1| hypothetical protein MAP1850 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466872|ref|YP_881589.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] gi|254775058|ref|ZP_05216574.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41396302|gb|AAS04167.1| hypothetical protein MAP_1850 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118168159|gb|ABK69056.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 287 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 102/275 (37%), Gaps = 1/275 (0%) Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLI 157 + L+ +++ + L V ++ + + Sbjct: 7 QPFAPISVPLARLYRRGKVPVIRLGHLLVFFVRALVAVPLALRQYSGEFLRLLSNITWGN 66 Query: 158 RQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 + G + V +++ GA++ +G L G + + S++ RE+ L+ + Sbjct: 67 GSIVVGGGTA-GVAVVLGMTVGALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMAS 125 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + A + G A++GSM+I EEIDA+ ++ + + L++ R+ A ++++ L Sbjct: 126 LAFAMQGGCRFTAQLGSMRIAEEIDAMESIAIRPIPYLVTTRLIASVVAIVPLYAACLAI 185 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + IV+ + F +I L KA + G+ Sbjct: 186 GYLSTQIVVSIGSGGSTGSYLHYFTLMLAGQDIVYSLFKAVVFVWIASTIQCYYGYYASG 245 Query: 338 HSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G + SI++VII++ L + + + Sbjct: 246 GPEGVGVAAGHGMRASITVVIIVNMLLTMALWGVD 280 >gi|326382400|ref|ZP_08204092.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395] gi|326199130|gb|EGD56312.1| putative YrbE family protein [Gordonia neofelifaecis NRRL B-59395] Length = 268 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 96/205 (46%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 VG V++++ GA I QG L G + + S RE+ ++ A+ A Sbjct: 52 VGGGTAVVLVILGMAVGASIGIQGYASLDLVGMGSLTGFISSYANTRELAPMIAAIGFAA 111 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 ++G + AEIGSM+I EEIDA+ +M + + ++S R+ A I ++ L I+ + + A Sbjct: 112 QAGCRLTAEIGSMRIAEEIDALESMAVRPIPYVVSTRVVAAITTIIPLYIVTLILSFVAA 171 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +V+ + + F++ ++ +IK ++ IV +GF + + Sbjct: 172 KLVVILMHGQSGGTYDFYFNAFLKPQDLVFSVIKVLIFVVSVVIVHSYQGFYATGGAEGV 231 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367 G+ + S+ ++++ D + + Sbjct: 232 GRASGRAIRSSLIVIVVEDMILTLL 256 >gi|262202880|ref|YP_003274088.1| hypothetical protein Gbro_2987 [Gordonia bronchialis DSM 43247] gi|262086227|gb|ACY22195.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 288 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 96/263 (36%), Gaps = 10/263 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166 + +G +I+ +S F+ + + R + V Sbjct: 15 EAAKGLYRGPRDALAAMGHLITFLVRSISSVPLAFRHYSKEVWRLLADVAWGNGAIVVGG 74 Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V++++ + GA + + L+ G + L + REI LL A +SG Sbjct: 75 GTVGVMVILGIMGGATVGIEAYTALNLLGMAPVTGGLSAFATTREIAPLLAATAFTAQSG 134 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++GSM+I EEIDA+ + + + L++ R+ A ++++ L ++ + I ++ Sbjct: 135 CRFTAQLGSMRIAEEIDALEAIAIRPLPYLVTTRMLAAVLAIVPLYSVSLAANYIACQVM 194 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F ++ IK + G+ +G Sbjct: 195 FQFQSGQGAGTYLYYFTQFLVSWDVVFSFIKVIIFVLLTTFIQCYYGYFASGGPEGVGVA 254 Query: 346 VTTCVVQSISIVIIIDSLFAIFY 368 + +I +++ + + + + Sbjct: 255 AGHAIRLAIIVIVFANLVMTLVF 277 >gi|120401973|ref|YP_951802.1| hypothetical protein Mvan_0958 [Mycobacterium vanbaalenii PYR-1] gi|119954791|gb|ABM11796.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 285 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 107/265 (40%), Gaps = 10/265 (3%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GVSG 167 +V+ + LG ++ + + +R + + G Sbjct: 14 VVRAYRKISTPLVRLGHMLVFFVRALHGLPVALRHYRKEFVRLLSDIAWGNGSLVVGGGT 73 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +++ GA++ +G L G + + S++ RE+ + ++ A ++G Sbjct: 74 AGVAVVLGITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIAASLAFATQAGCR 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++GSM+I EEIDA+ ++G+ + L++ R+ A ++++ L +L + + IV+ Sbjct: 134 FTAQLGSMRIAEEIDALESLGIRPIPYLVTTRLMASVVAVIPLYVLCLAVSYLTTQIVVQ 193 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F + +I ++K + GF +G Sbjct: 194 IISGGSAGSYLHYFTLMLSGQDILYSVLKTVIFVWIASTIQCYYGFYASGGPVGVGVAAG 253 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372 + SI++VI+++ L + +++ Sbjct: 254 HAMRASITVVIMVNMLLTMALWSVD 278 >gi|126436263|ref|YP_001071954.1| hypothetical protein Mjls_3686 [Mycobacterium sp. JLS] gi|126236063|gb|ABN99463.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 270 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 103/245 (42%), Gaps = 1/245 (0%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 + + +G + + + + ++ + Q ++V + +L++ + Sbjct: 17 VKNLAGPMAAVGGLFAMSADAIRYVFRRPFQWREFLEQSWFVAKVSLAPTVLVAIPFTVL 76 Query: 182 IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 ++ L + GA S + + ++G L+T +++AG +A+ A++GS I EEI Sbjct: 77 VSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEI 136 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 A+ +G+D V+ L++PR+ A + LL L I+G D+ F + Sbjct: 137 SAMEVLGIDPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYTFSVFIQDVNPGAFAAGI 196 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIII 360 + + +KA G+VA G V G + ++G V VV + + I Sbjct: 197 TLLTGVPEMIISCVKALLFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMALFAI 256 Query: 361 DSLFA 365 + L Sbjct: 257 NVLVT 261 >gi|146328846|ref|YP_001209755.1| hypothetical protein DNO_0858 [Dichelobacter nodosus VCS1703A] gi|146232316|gb|ABQ13294.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 262 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 2/249 (0%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 +Q L T + + I+ +++ GV +P++++ G V+A Sbjct: 14 VLTQLAALAEFSFLTLQLHWQLSILWRRPMLWIKALFHAGVLSLPIIMVSGLFVGMVLAL 73 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 Q +S FGAE + L+++ +RE+G ++TA++ AGR+GSAI AEIG MK E++DA+ Sbjct: 74 QAFINMSLFGAEQSTSTLVALSLMRELGSVVTALLFAGRAGSAITAEIGLMKTTEQLDAM 133 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ + + PR + +++LPLL I+ +A++GA V + + +F+S+ Sbjct: 134 TMMGVEPLAQIGVPRFFGALLALPLLAIIFVATAMVGAYWVAVPHLGLDNGIFWSQLQRG 193 Query: 305 ATLA-NIFTGL-IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 NI G+ +K+ +++ +GF + + + T VV S V+ +D Sbjct: 194 VGFYQNIVLGIGVKSLVFGWLCAAISVFQGFVCVPTAQGMAQATTKTVVLSSLAVLAVDF 253 Query: 363 LFAIFYFAI 371 L FA+ Sbjct: 254 LLTSLMFAL 262 >gi|326382582|ref|ZP_08204273.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL B-59395] gi|326198701|gb|EGD55884.1| hypothetical protein SCNU_06570 [Gordonia neofelifaecis NRRL B-59395] Length = 282 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 98/263 (37%), Gaps = 10/263 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCA-SSYKFKGFLLSLIRQMYYVGVS-------- 166 + + K +G +I+ + + F + + R + V Sbjct: 9 EWLKKLWQAPRDGIVAMGHLITFLVKSIGLAPITFTHYRKEVWRLLSDVAWGNGAIVVGG 68 Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V++++ + GA + +G L+ G + L + REI LL A +SG Sbjct: 69 GTVGVMVILGVMGGATVGIEGYTALNLLGMSPITGGLSAFATTREIAPLLAATAFTAQSG 128 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 A++GSM+I+EEIDA+ ++ + + L++ R+ A ++S+ L ++ + + + Sbjct: 129 CRFTAQLGSMRISEEIDALESIAIRPLPYLVTTRMAAAVLSIIPLYAISLAANYVACQFM 188 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + F ++ +K + G+ +G Sbjct: 189 FQVQSGQGAGTYLHYFDQFILSRDVVFSFLKVIVFVLLTTFIQCYYGYFASGGPEGVGVA 248 Query: 346 VTTCVVQSISIVIIIDSLFAIFY 368 + SI ++ + + + + Sbjct: 249 AGHAIRLSIITIVFANLILTLVF 271 >gi|254820120|ref|ZP_05225121.1| hypothetical protein MintA_09346 [Mycobacterium intracellulare ATCC 13950] Length = 286 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 107/273 (39%), Gaps = 6/273 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 S + + + A LG + + + + + + Sbjct: 8 SQLFPRLSYTLDGWVAGWRRIGAQARFYARTLGAIRDALSSYKHETLRMIAEMGLGAGAL 67 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G V +V ++ G+++ QG LS G E + + + + R + L + + Sbjct: 68 AVIG-GTVGIVGFLTLSGGSLVTIQGYSSLSGIGVEALTGFVSAYVNGRIVTPLTAVIGL 126 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 + G+ A++G+M+INEEIDA+ MG+ + L+S R+ A ++ + L + + + Sbjct: 127 SATIGAGTTAQLGAMRINEEIDALEVMGIRSIAYLVSTRVIAGVVVVIPLYCIGLWMSFY 186 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 A Y P V+ F + +I L++A M + +V G+ Sbjct: 187 AARFATTSVYGQPTGVYDHYFSTFLQPTDIIWSLLQAVLMGLVVMLVHTYYGYTASGGPA 246 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +G+ V V S+ ++ I + ++ I Sbjct: 247 GVGEAVGRAVRSSMVS-----AVLVILFSSLAI 274 >gi|226361227|ref|YP_002779005.1| YrbE family protein [Rhodococcus opacus B4] gi|226239712|dbj|BAH50060.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 302 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 115/279 (41%), Gaps = 1/279 (0%) Query: 90 RKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGE-FCASSYK 148 + +GK + + S + G + +N + + Sbjct: 14 PAGPAQADRSAPEKRRRPRLSVAAVGKYLKETPIRSLATLGRSGELAANILRYTVSDTIA 73 Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + L + QM+ + +L++ GA ++ Q ++Q GA + + + Sbjct: 74 LRLPLEEVATQMWKLLKVTALPALLMAVPIGAEVSVQVGGIMNQVGANSLAGAASGLGVV 133 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 + + ++++G + SAI +++G+ I EEI+AIR MG+D V+ L+ PR A+I P Sbjct: 134 GQGAPMAAGLLMSGAAASAIASDLGARAIREEIEAIRVMGIDPVQRLVVPRFIAMIAIAP 193 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 +L I+ + + ++ D+ F+ F S AT ++ ++K+ A + ++A Sbjct: 194 MLCIVIVAAGVAAGLVISANVNDVVPGSFWQSFGSFATPTDLVFSVLKSVIFAALVVLIA 253 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G + V VV S+ + + + + + Sbjct: 254 SLRGLEAKGGPKGVANAVNASVVLSVFCIFMTNLVVSQI 292 >gi|169631107|ref|YP_001704756.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243074|emb|CAM64102.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 320 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 129/305 (42%), Gaps = 4/305 (1%) Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSC 126 +L+ + + + S + + P I + + ++ + Sbjct: 6 ADARLEPAADDWTETPDVESGSKSEDDHTSDPAAGALPQLLDRAPRLIKRPVAYAVSQTD 65 Query: 127 SQAHILGL----VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 S LG V+ + + + + + Q +++ V IL+S G ++ Sbjct: 66 SMLKTLGRYVDLVVQSFAFLISDIVRLRHPWQDTVIQSWFILTVTVVPAILVSIPFGVIV 125 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A Q +SQ GA S + +++ ++ A+++ G +GSA+ ++G+ I EE+D Sbjct: 126 AVQAGSIISQVGASSISGAAGGLGVIQQGAPIVAALLLGGAAGSAVATDLGARSIREEVD 185 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+R MG++ V+ L++PR+ A++ PLL I F I +V + + S F Sbjct: 186 AMRVMGVNPVQRLVTPRLAAILFVSPLLCIFIIFVGIFAGYLVNVGFQGGTPGSYLSSFA 245 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + A ++++ ++K + +VA + G + + V VV + V+++++ Sbjct: 246 AFANVSDVTVAVLKTWLFGVVVILVACQRGLEAKGGARGVADAVNATVVIGVVTVMVLNT 305 Query: 363 LFAIF 367 + Sbjct: 306 VITQI 310 >gi|118469400|ref|YP_885536.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170687|gb|ABK71583.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 285 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 109/278 (39%), Gaps = 9/278 (3%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 S + + G++ K I ++ +G + L+ + Sbjct: 4 SPYVPTLLAPWVRFGQRASKPIVRLGHMLVFFVRAVAAIPIVLRHY---RGEFVRLLSDI 60 Query: 161 Y------YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 VG V +++ GA++ +G L G + + S++ RE+ + Sbjct: 61 AWGNGSLVVGGGTAGVAVVLGITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPI 120 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 ++ A ++G A++GSM+I EEIDA+ ++ + + L++ R+ A ++++ L ++ Sbjct: 121 AASLAFATQAGCRFTAQLGSMRIAEEIDALDSIAIRPIPYLVTTRLMAAVVAVIPLYVMC 180 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + V++ + F + +I L+K V GF Sbjct: 181 LAVSYLTTQTVVFLISGGSTGSYLHYFTLMLSGQDILYSLLKTIIFVWIASTVQCYYGFY 240 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G + SI++VII++ L + +++ Sbjct: 241 ASGGPVGVGVAAGHAMRASITVVIIVNMLLTMALWSVD 278 >gi|284043083|ref|YP_003393423.1| hypothetical protein Cwoe_1620 [Conexibacter woesei DSM 14684] gi|283947304|gb|ADB50048.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 246 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 1/198 (0%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 P+++ Q A L FGA + +RE +TA+++AG +G+A Sbjct: 36 FPLLVSTVAFGYGAPGLQAANFLVLFGALDRLGGFFVLASIREFAPFVTAIVLAGVAGTA 95 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 I A++G+ KI EE+DA++ +G+D V+ L+ PR AL++ L + A + G ++ Sbjct: 96 ITADLGARKIREELDALQVLGVDPVKNLVVPRFLALMLVTGLFDVYALLFGVFGG-VIAT 154 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 P FF+ F + A+ +++ L+K I IV +G + +G+ V Sbjct: 155 LVNGAPLGPFFATFLTNASTTDLWGSLLKTTLFGAIIAIVCCYKGMTASGGAEGVGRAVN 214 Query: 348 TCVVQSISIVIIIDSLFA 365 VV + + + +F Sbjct: 215 QAVVIAFMGIFAFNYVFT 232 >gi|254822928|ref|ZP_05227929.1| hypothetical protein MintA_23574 [Mycobacterium intracellulare ATCC 13950] Length = 255 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 100/245 (40%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ + Q +++ I++S ++ Sbjct: 3 DQLQTPLELVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLL 62 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 63 IFTLNVLLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 122 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A + LL L ++G + ++ + + Sbjct: 123 AMEVLGIDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLT 182 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + L + +KA G+V G V S LG V VV + + ++ Sbjct: 183 TITGLPEVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNV 242 Query: 363 LFAIF 367 + Sbjct: 243 VLTTI 247 >gi|226364102|ref|YP_002781884.1| YrbE family protein [Rhodococcus opacus B4] gi|226242591|dbj|BAH52939.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 289 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 102/253 (40%), Gaps = 8/253 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173 + + + Q H ++ K + L G + V+ L Sbjct: 26 IGHMEEMGRQLHFYTHAVTAIPRTFRRYR--KETIRLLAEVSMGTGALAVIGGTLVVISL 83 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ G + QQGA + + G S + + RE ++ + + G+ A++G Sbjct: 84 LTTAVGYEVGQQGATSMGRIGIGALSGFISAFFNTREAIPVIAGIALTATVGAGFTAQLG 143 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+++EEIDA+ TM + + L++ R+ A II++ L +A F + +V + Sbjct: 144 AMRVSEEIDAMETMSIPSLPYLVTTRVTAGIIAVIPLYAVALFVGYVATQLVTEYLGEAS 203 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + F+ +++ ++K M+ + V G+ +G V V S Sbjct: 204 -GTYQHYFNVFLVPSDVAWSMVKVLAMSVVVMCVHCYHGYNAKGGPAGVGVAVGRAVRTS 262 Query: 354 ISIVIIIDSLFAI 366 + +++ID L I Sbjct: 263 LIAIMVIDLLVGI 275 >gi|126436743|ref|YP_001072434.1| hypothetical protein Mjls_4171 [Mycobacterium sp. JLS] gi|126236543|gb|ABN99943.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 284 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 16/262 (6%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-------PVV 171 V N +Q G I + + ++ LI QM +GV + +V Sbjct: 21 VNGWNRIGTQTQFYGETIKGIWDAVVHY---RTEVVRLIAQM-SLGVGALAVIGGTIVIV 76 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ G++IA Q QL Q G E + + L +R + L+ + +A G+ A+ Sbjct: 77 GFLTLSAGSLIAVQAYSQLQQVGVEALAGFTSAFLNVRLVSPLVAGIGLAATIGAGATAQ 136 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+I+EE+DA+ MG+ V L S R+ A +I + L +A +A Y Sbjct: 137 LGAMRISEEVDALEVMGIRSVAYLASSRVLAGVIVVIPLYCIAVLAAFAATRTGTTLVYG 196 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 V+ F++ ++ ++A MA + +V GF +G+ V V Sbjct: 197 QSTGVYDHYFYTFLNPTDLIYSFLQAISMAVVVMLVHTYYGFTATGGPAGVGEAVGRAVR 256 Query: 352 QSISIVIIIDSLFAIFYFAIGI 373 S+ ++F + ++ I Sbjct: 257 TSLVA-----AVFVTLFVSLAI 273 >gi|111023084|ref|YP_706056.1| hypothetical protein RHA1_ro06121 [Rhodococcus jostii RHA1] gi|110822614|gb|ABG97898.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 286 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 3/259 (1%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK---FKGFLLSLIRQMYY 162 + ++ + + + G VI+ ++ + +S Sbjct: 8 PAVHWVRARARQPLDLMTGLGREFTFYGSVIAGVPLAIVKYWRHIMRQIGDISFGGATLL 67 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G + VV +S V + +G L G S L +IL RE+ ++ ++ +A Sbjct: 68 AGGGAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALAA 127 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 + G+ A++G+M+I+EEI A+ M + + L S R+ + +I + L ++ S+ + + Sbjct: 128 KVGTGFTAQLGAMRISEEISALDAMAIRSLPFLASTRLVSCLICVVPLYVVGLLSSYLAS 187 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 +VI + + FH T ++ +KA A I +V G+ + Sbjct: 188 RLVIVTFGGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAHGGPEGV 247 Query: 343 GKKVTTCVVQSISIVIIID 361 G+ + SI + I+D Sbjct: 248 GRAAGRALRTSILAIGIVD 266 >gi|118464753|ref|YP_884137.1| hypothetical protein MAV_5017 [Mycobacterium avium 104] gi|254776559|ref|ZP_05218075.1| hypothetical protein MaviaA2_18089 [Mycobacterium avium subsp. avium ATCC 25291] gi|118166040|gb|ABK66937.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 258 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 98/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + +++ + Q +++ I++S ++ Sbjct: 12 LTLVGGFFRMCVLTGKALFRWPFQWREFVLQCWFIMRVAFLPTIMVSIPLTVLLIFTLNV 71 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEIDA+ +G Sbjct: 72 LLAQFGAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLG 131 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A + LL L ++G + ++ + + + L Sbjct: 132 IDPIHRLVVPRVIAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLP 191 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+V G V S LG V VV + + ++ + Sbjct: 192 EVVIATVKAAVFGLIAGLVGCFRGLTVRGGSKGLGTAVNETVVLCVVALYAVNVVLTTI 250 >gi|308810118|ref|XP_003082368.1| unnamed protein product [Ostreococcus tauri] gi|116060836|emb|CAL57314.1| unnamed protein product [Ostreococcus tauri] Length = 361 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 5/210 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 KF+ + + A + G V+ + ++Q+ VG + V +L S G Sbjct: 105 KFLWRATATALLFGSVLYRLVR-----EPKRVNWEQTLQQIARVGPQTLGVSLLTSSFVG 159 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V Q + ++ G + L+ + RE+ ++ A+++ GR GS+I AE+G+M++ E Sbjct: 160 MVFTIQFCKEFAKVGLKNAIGGLLGLAFARELTPVICAIVLTGRIGSSIAAELGTMQVTE 219 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 ++D + +G D V L+ PR+ A ISLP+L++L+ ++ + ++ Y + V Sbjct: 220 QVDQLTVLGTDPVDYLVIPRVIACSISLPILSVLSFAQSLGASILLADLRYGVSPNVIID 279 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAM 329 ++I K+ I ++ Sbjct: 280 SVAKYVEPSDIGVMAAKSIAFGAVIAAISC 309 >gi|326382401|ref|ZP_08204093.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL B-59395] gi|326199131|gb|EGD56313.1| hypothetical protein SCNU_05666 [Gordonia neofelifaecis NRRL B-59395] Length = 245 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 104/230 (45%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + ++ Q ++V IL++ G +++ Q Q GA Sbjct: 6 ALRWTVYDIVTGRFPFREVVVQTWFVITVTTLPAILVAIPFGVIVSVQVGSLTQQVGATS 65 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 + + +++ ++TA+++ G +GSAI +++G+ + EEIDA+ T+GL+ R +++ Sbjct: 66 IAGAAGGLGIIQQGAPIVTALLLGGAAGSAIASDLGARTVREEIDAMETLGLNPTRRVVA 125 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 PR A++I P+L +L F+ ++ I+ I + + F S A+ A+I LIK+ Sbjct: 126 PRFVAVLIVAPMLCMLIVFTGLVAGYILSVNVQGITPGSYVASFASFASSADIVVALIKS 185 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +A G + + + V VV + +I+ + Sbjct: 186 VVFGLVVVAIACHRGLSTKGGPKGVAESVNATVVLGVVACFVINVVITQL 235 >gi|30468225|ref|NP_849112.1| ORF251 [Cyanidioschyzon merolae strain 10D] gi|30409325|dbj|BAC76274.1| ycxr [Cyanidioschyzon merolae strain 10D] Length = 251 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 1/240 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + ++ + + ++ L + Q+ ++ + + + S G V+ Q Sbjct: 1 MQMISSILSILRFQAQIIVHLFHWRYPL-MIKWQIAWIAEQSLSLCWIHSCFLGMVLCLQ 59 Query: 186 GAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 A +L A ++ + LRE+ + TA+++ R S+ +E+ SM ++E+ DA+ Sbjct: 60 LAKELISLQATPMIGAILGLTLLRELSPVFTAILLTARVASSYTSELASMCVSEQFDALY 119 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 + ++ I PR A +I LPL T +++ + + Y IP +F + S+ Sbjct: 120 LLQTHPFQLHIIPRYLACLIMLPLCTWFCFLTSLSASLFLACLAYGIPVNLFLTSLRSSL 179 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 +L +I T L+KA + +++ S + T VV + +++ D L + Sbjct: 180 SLWDILTSLLKAMIFGALLALISCHYALITRGGSKQIAISTTRAVVHVLVLILAFDWLLS 239 >gi|126433443|ref|YP_001069134.1| hypothetical protein Mjls_0834 [Mycobacterium sp. JLS] gi|126233243|gb|ABN96643.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 281 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 10/266 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVS-------- 166 + + +GL + + +S + ++QM + Sbjct: 8 RLFEATVGMVGGVFREVGLWVVFIAKAFSSVPVAVFKYRRQTLQQMNSLAWGRGSLIVDG 67 Query: 167 -GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + V++L+ GA +A + L+ G S + I +RE+G +++AV AG++G Sbjct: 68 GAISVLLLLGIAVGASLAVEAFAVLNIIGFGGLSGIIGGIGGVRELGPIVSAVAFAGQAG 127 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + AEIG+M+I EEIDA+ +GL + ++ R+ +I + ++A + V Sbjct: 128 CRMTAEIGAMRIAEEIDALEAIGLRPIPFVVGTRLIGAMILVVPGYLVALIANFFVMDTV 187 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 I +++ P + F T ++ +IK A+ ++ G+ +G+ Sbjct: 188 IRVFHNQPGGTYNHYFAQFVTPTDLAYSVIKVAVFCMAVTLIHCYYGYFASGGPVGVGRA 247 Query: 346 VTTCVVQSISIVIIIDSLFAIFYFAI 371 V S+ +I +D + + + + Sbjct: 248 SGRAVRTSLITIIFLDLILTVAMWGL 273 >gi|325003317|ref|ZP_08124429.1| integral membrane protein yrbe4b [Pseudonocardia sp. P1] Length = 280 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 105/271 (38%), Gaps = 10/271 (3%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSG- 167 + +G + + +Q LG +S K K + + R + V Sbjct: 1 MATQLGTRARRLAQAPLNQLEELGDQLSLYTRSIVWIPKTLKDYRKEVARLLAEVSFGSG 60 Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 V V+ +S G+++ QG L G E + + + R I L+ A Sbjct: 61 ALIVILGTVGVMASLSLFVGSLVGLQGFRALDALGVEALTGFITAYFNTRSIAPLVAASA 120 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 + G+ A++G+M+I+EEIDA+ M + V L++ R+ A I+++ + L ++ Sbjct: 121 LTATLGAGFTAQLGAMRISEEIDALEVMAVPSVPYLVTTRVIAGIVAIIPIYTLGLLASY 180 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 A + + + + F ++++ +K A I ++ G+A Sbjct: 181 AAARLNVTLVNGLSGGTYDHYFDLFLPVSDVLLSYLKVIVFATVIILIHCHYGYAAKGGP 240 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +G V V SI I+D + F Sbjct: 241 AGVGVAVGRAVRLSIVSTAILDFFLTLVMFG 271 >gi|84494809|ref|ZP_00993928.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] gi|84384302|gb|EAQ00182.1| putative ABC transporter integral membrane protein [Janibacter sp. HTCC2649] Length = 203 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 99/198 (50%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S GAVIA Q Q GA+ F+ + +RE ++TA++IAG GSAI A++G Sbjct: 1 MSIPFGAVIALQLGTLTRQLGAQSFTGAASVLAVVREASPIVTALLIAGAGGSAICADLG 60 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 S KI EE+DA+ +G+ ++ L+ PR+ A ++ LL L + + G Sbjct: 61 SRKIREELDAMEVLGISPIQRLVVPRVLATMLVAVLLNGLVSVVGVGGGYFFNVVIQGGT 120 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + + F + A LA+++T IKA IVA +G G +G V VV + Sbjct: 121 PGAYLASFTALAQLADLWTSEIKALLFGAVAAIVASYKGLTAGGGPKGVGDAVNQSVVIT 180 Query: 354 ISIVIIIDSLFAIFYFAI 371 ++ +I+ + + YF + Sbjct: 181 FMLLFVINFVISAIYFQV 198 >gi|226365583|ref|YP_002783366.1| YrbE family protein [Rhodococcus opacus B4] gi|226244073|dbj|BAH54421.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 286 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 10/260 (3%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG--- 167 + + + LG + G A + ++RQ+ + G Sbjct: 7 WPAAHWVRARVRQPLGLMTGLGREFTFYGSVIAGVPLAVVKYWRHIMRQIGDISFGGATL 66 Query: 168 ------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 + VV +S V + +G L G S L +IL RE+ ++ ++ +A Sbjct: 67 LAGGGAIGVVFAMSAVAATQVGIEGLRGLDLLGMGSLSGLLSAILNTRELAPVIASIALA 126 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 + G+ A++G+M+I+EEI A+ M + + L S R+ + +I + L ++ S+ + Sbjct: 127 AKVGTGFTAQLGAMRISEEISALDAMAIPSLPFLASTRLVSCLICVVPLYVVGLLSSYLA 186 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + +VI + + FH T ++ +KA A I +V G+ Sbjct: 187 SRLVIVTFSGQSAGTYDYYFHLMLTPTDVAYSFVKAVVFATIIALVHCSYGYHAYGGPEG 246 Query: 342 LGKKVTTCVVQSISIVIIID 361 +G+ + SI + I+D Sbjct: 247 VGRAAGRALRTSILAIGIVD 266 >gi|41408215|ref|NP_961051.1| hypothetical protein MAP2117c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396570|gb|AAS04434.1| hypothetical protein MAP_2117c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 255 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 106/239 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + E A++ + ++ Q+++V + I++S +I Sbjct: 10 MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++TA++++G +A+ A++G+ I EEIDA++ +G Sbjct: 70 LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PRI A +L + + G+ I + + F + L Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVIGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + LIKA + G++A +G +VG +G V VV S + I+ L Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248 >gi|311744213|ref|ZP_07718017.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311312386|gb|EFQ82299.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 257 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 112/239 (46%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G + + ++ + + Q +++ + IL+S GA+IA Q Q Sbjct: 13 GQIAGMAIDVLRLTFTTRFQTREFVEQAWFITSVTLVPTILVSIPFGAIIALQVGSLTGQ 72 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA+ F+ + +RE + A++IAG +GSAI +++G+ KI EEIDA+ +G+D + Sbjct: 73 LGAQSFAGATAVLATVREAAPIAAALVIAGAAGSAICSDLGARKIREEIDAMEVLGIDPL 132 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 L+ PR A + L+ + + I G F S F + ATL +++ Sbjct: 133 ARLVVPRALATVAVALLINGIVITAGIAGGYFFTVVVQGGSAGAFLSSFAALATLPDVYV 192 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 ++KA IVA +G G + +G+ V V+ + ++ +++++ YF I Sbjct: 193 AMVKAAVFGFLTAIVAANKGLTAGGGPSGVGRAVNEAVILAFMLLFLLNAIITALYFQI 251 >gi|312137895|ref|YP_004005231.1| integral membrane protein yrbe1a [Rhodococcus equi 103S] gi|311887234|emb|CBH46543.1| putative integral membrane protein YrbE1A [Rhodococcus equi 103S] Length = 258 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 110/247 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +++G + + + + L ++Q ++G +L+ G +A Sbjct: 5 ALQGGYLIGFSVQAMVSLARALLRGRLSLEETVKQTLFIGRVSTGPSLLLMVPIGVFVAV 64 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + GA +S +++ + + + L+ A+M+AG +GSAI ++GS KI EEIDA+ Sbjct: 65 SVGELAGRIGAGGYSGAVVAFIIVGQASALVCALMMAGVAGSAICTDLGSRKIREEIDAM 124 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG+D V L++PR+ A ++ L + F ++ + +P F + F Sbjct: 125 EVMGIDVVERLVAPRLLAAVVVSVALCAMVTFGGVMACYLYHIYVQHLPAGTFLATFGQY 184 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 A+ L+KA A +VA +G + V VV + ++V ++++ Sbjct: 185 GRTADFVMALVKAAIFALTSTLVATFKGLHAKGGPRGVADAVNEAVVIAFALVFVVNTAL 244 Query: 365 AIFYFAI 371 + Y I Sbjct: 245 SALYTVI 251 >gi|296141464|ref|YP_003648707.1| hypothetical protein Tpau_3790 [Tsukamurella paurometabola DSM 20162] gi|296029598|gb|ADG80368.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 284 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 88/199 (44%) Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ +GA +A + L+ G + + + +RE+ + + A ++G + A+I Sbjct: 78 ILGAASGAAVAIEAYAGLNLIGFGPLTGVIGGLANIREMIPISAGIGFAAQAGCRMTAQI 137 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 GSM+I EEIDA+ +G+ + ++S R+ A I+ + +L A + +++ ++ Sbjct: 138 GSMRIAEEIDAVEALGIRSIPYVVSTRLIAGIVVVIPAYLLTLLLAFLTCKLIVVVFHGQ 197 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 + F + +I +KA A+ I+ G+ +G V Sbjct: 198 AQGTYNHYFEQFLSPGDILLSTVKAVVFCAAVTIIHCYYGYFAKGGPEGVGLASGRAVRA 257 Query: 353 SISIVIIIDSLFAIFYFAI 371 S+ V+ +D + I + + Sbjct: 258 SLVTVLTLDFILTIVMWGV 276 >gi|296141836|ref|YP_003649079.1| hypothetical protein Tpau_4171 [Tsukamurella paurometabola DSM 20162] gi|296029970|gb|ADG80740.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 103/266 (38%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 Y + ++ + ++I + + L+ R Sbjct: 6 YRPRGTRTLGRVYTWLRGVLARLGHMMGFCVQAVIMIPHAARHYSRQTISTVTDLTWGRG 65 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 VG +++++ G +A Q L G + + ++ +RE +L A Sbjct: 66 AVIVGGGTSLMMVVLGLAVGGTVAVQAFSTLDLLGMGPLTGSISALANIREFAPILAAAG 125 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 A ++G + AEIG+M+INEEIDA+ ++GL + ++S R+ A +I++ ++A + Sbjct: 126 FAVQAGCRMTAEIGAMRINEEIDALESLGLRSISFVVSTRVLAGLIAVIPTFLIAIVVSF 185 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 S+++ + F + ++ +K + ++ +GF Sbjct: 186 FACSVIVTVVQGESAGAYTHYFRQFLSGPDLLASTVKVIVFLIVVILIHCYQGFFAAGGP 245 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFA 365 +G V S+ ++++D L Sbjct: 246 EGVGVASGRAVRASLVSIVVLDMLLT 271 >gi|118466063|ref|YP_881276.1| TrnB1 protein [Mycobacterium avium 104] gi|254774784|ref|ZP_05216300.1| TrnB1 protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118167350|gb|ABK68247.1| TrnB1 protein [Mycobacterium avium 104] Length = 255 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 107/239 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + E A++ + ++ Q+++V + I++S +I Sbjct: 10 MTALGQFFLLSAEALAAAVRGPWAWREILEQIWFVARVSIFPTIMLSIPYTVLIVFVLNI 69 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++TA++++G +A+ A++G+ I EEIDA++ +G Sbjct: 70 LLVEIGAGDLSGAGAGLASVTQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIG 129 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PRI A +L + + + G+ I + + F + L Sbjct: 130 VNPVQALVVPRIIAATFVAVMLYAVVAVTGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP 189 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + LIKA + G++A +G +VG +G V VV S + I+ L Sbjct: 190 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALFFINILTTAL 248 >gi|215404242|ref|ZP_03416423.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|218753676|ref|ZP_03532472.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis GM 1503] gi|253798988|ref|YP_003031989.1| hypothetical protein TBMG_02026 [Mycobacterium tuberculosis KZN 1435] gi|254550984|ref|ZP_05141431.1| hypothetical protein Mtube_11066 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297634533|ref|ZP_06952313.1| hypothetical protein MtubK4_10441 [Mycobacterium tuberculosis KZN 4207] gi|253320491|gb|ACT25094.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis KZN 1435] Length = 269 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 105/252 (41%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + LG + T + +K + Q ++V +L++ Sbjct: 11 KAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMT 70 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + L+ GA FS +I + + ++T +++AG +A+ A++G+ Sbjct: 71 IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGAR 130 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 I EE+DA+R MG++ ++ L +PR+ A L + + +IGA + Sbjct: 131 TIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAG 190 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + + ++ +IKA G++A +G +VG +G+ V VV + Sbjct: 191 AWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFI 250 Query: 356 IVIIIDSLFAIF 367 ++ +I+ + Sbjct: 251 VLFVINIVVTAV 262 >gi|260203312|ref|ZP_05770803.1| hypothetical protein MtubK8_03235 [Mycobacterium tuberculosis K85] gi|289572747|ref|ZP_06452974.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85] gi|289537178|gb|EFD41756.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis K85] Length = 265 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 101/245 (41%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ I Q +++ G I++S ++ Sbjct: 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A ++ LL L ++G + ++ + + Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNSLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + IKA G+V G V S LG V VV + + ++ Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252 Query: 363 LFAIF 367 + Sbjct: 253 ILTTI 257 >gi|118470268|ref|YP_889052.1| hypothetical protein MSMEG_4796 [Mycobacterium smegmatis str. MC2 155] gi|118171555|gb|ABK72451.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 257 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 107/250 (42%), Gaps = 1/250 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + + +G + S + + +++ + Q +++ + +L++ Sbjct: 1 MNLGRNLSGPMQAVGALFSMSLDAIMFAFRRPFQGREFLDQCWFIARVSMAPTLLVAIPF 60 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 +++ L + GA S + + ++G ++T +++AG +A+ A++GS I Sbjct: 61 TVLVSFTLNILLRELGAADLSGAGAAFGAVTQLGPMVTVLIVAGAGATAMCADLGSRTIR 120 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +G++ ++ L++PRI A + LL L I+G + D+ F Sbjct: 121 EEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYVFSVFIQDVNPGAFA 180 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357 + + + IKA G+VA G VG + ++G V VV + + Sbjct: 181 AGITLLTGVPEVIISCIKAALFGLIAGLVACYRGLTIVGGGAKAVGNAVNETVVYAFMAL 240 Query: 358 IIIDSLFAIF 367 +I+ + Sbjct: 241 FVINVVVTAI 250 >gi|15607308|ref|NP_214681.1| integral membrane protein YRBE1A [Mycobacterium tuberculosis H37Rv] gi|15839545|ref|NP_334582.1| hypothetical protein MT0176 [Mycobacterium tuberculosis CDC1551] gi|31791345|ref|NP_853838.1| integral membrane protein YRBE1A [Mycobacterium bovis AF2122/97] gi|121636079|ref|YP_976302.1| integral membrane protein YrbE1a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659931|ref|YP_001281454.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra] gi|148821359|ref|YP_001286113.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis F11] gi|167970287|ref|ZP_02552564.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis H37Ra] gi|215406160|ref|ZP_03418341.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|215414032|ref|ZP_03422691.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 94_M4241A] gi|215448446|ref|ZP_03435198.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T85] gi|218755901|ref|ZP_03534697.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis GM 1503] gi|224988552|ref|YP_002643239.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797089|ref|YP_003030090.1| hypothetical protein TBMG_00168 [Mycobacterium tuberculosis KZN 1435] gi|254233556|ref|ZP_04926882.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis C] gi|254366619|ref|ZP_04982663.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis str. Haarlem] gi|254549106|ref|ZP_05139553.1| hypothetical protein Mtube_01351 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185030|ref|ZP_05762504.1| hypothetical protein MtubCP_03112 [Mycobacterium tuberculosis CPHL_A] gi|289445698|ref|ZP_06435442.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis CPHL_A] gi|289552419|ref|ZP_06441629.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 605] gi|289747934|ref|ZP_06507312.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|289760269|ref|ZP_06519647.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289764283|ref|ZP_06523661.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis GM 1503] gi|294994641|ref|ZP_06800332.1| hypothetical protein Mtub2_09017 [Mycobacterium tuberculosis 210] gi|297632645|ref|ZP_06950425.1| hypothetical protein MtubK4_00901 [Mycobacterium tuberculosis KZN 4207] gi|297729620|ref|ZP_06958738.1| hypothetical protein MtubKR_00931 [Mycobacterium tuberculosis KZN R506] gi|298527559|ref|ZP_07014968.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A] gi|306774257|ref|ZP_07412594.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu001] gi|306779001|ref|ZP_07417338.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu002] gi|306782789|ref|ZP_07421111.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu003] gi|306787156|ref|ZP_07425478.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu004] gi|306791712|ref|ZP_07430014.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu005] gi|306795756|ref|ZP_07434058.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu006] gi|306801752|ref|ZP_07438420.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu008] gi|306805963|ref|ZP_07442631.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu007] gi|306970359|ref|ZP_07483020.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu009] gi|306974591|ref|ZP_07487252.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu010] gi|307082300|ref|ZP_07491470.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu011] gi|307082645|ref|ZP_07491758.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu012] gi|313656946|ref|ZP_07813826.1| hypothetical protein MtubKV_00916 [Mycobacterium tuberculosis KZN V2475] gi|2213504|emb|CAB09750.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A [Mycobacterium tuberculosis H37Rv] gi|13879657|gb|AAK44396.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31616930|emb|CAD93037.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1A [Mycobacterium bovis AF2122/97] gi|110348076|gb|ABG72765.1| YrbE1A [Expression vector yrbE1AB] gi|121491726|emb|CAL70188.1| Conserved hypothetical integral membrane protein yrbE1A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603349|gb|EAY61624.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis C] gi|134152131|gb|EBA44176.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis str. Haarlem] gi|148504083|gb|ABQ71892.1| conserved hypothetical integral membrane protein YrbE1a [Mycobacterium tuberculosis H37Ra] gi|148719886|gb|ABR04511.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis F11] gi|224771665|dbj|BAH24471.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318592|gb|ACT23195.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 1435] gi|289418656|gb|EFD15857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis CPHL_A] gi|289437051|gb|EFD19544.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 605] gi|289688462|gb|EFD55950.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis 02_1987] gi|289711789|gb|EFD75805.1| hypothetical integral membrane protein yrbE1A [Mycobacterium tuberculosis GM 1503] gi|289715833|gb|EFD79845.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298497353|gb|EFI32647.1| YrbE1A [Mycobacterium tuberculosis 94_M4241A] gi|308217091|gb|EFO76490.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu001] gi|308328029|gb|EFP16880.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu002] gi|308332309|gb|EFP21160.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu003] gi|308336191|gb|EFP25042.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu004] gi|308339691|gb|EFP28542.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu005] gi|308343698|gb|EFP32549.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu006] gi|308347571|gb|EFP36422.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu007] gi|308351470|gb|EFP40321.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu008] gi|308352197|gb|EFP41048.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu009] gi|308356146|gb|EFP44997.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu010] gi|308360101|gb|EFP48952.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu011] gi|308367649|gb|EFP56500.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis SUMu012] gi|323717156|gb|EGB26365.1| hypothetical protein TMMG_00596 [Mycobacterium tuberculosis CDC1551A] gi|326905924|gb|EGE52857.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis W-148] gi|328456876|gb|AEB02299.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis KZN 4207] gi|328864228|gb|AEB53197.1| conserved integral membrane protein YRBE1A [Mycobacterium tuberculosis] Length = 265 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 101/245 (41%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ I Q +++ G I++S ++ Sbjct: 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A ++ LL L ++G + ++ + + Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + IKA G+V G V S LG V VV + + ++ Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252 Query: 363 LFAIF 367 + Sbjct: 253 ILTTI 257 >gi|15609101|ref|NP_216480.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Rv] gi|15841439|ref|NP_336476.1| hypothetical protein MT2016 [Mycobacterium tuberculosis CDC1551] gi|148661773|ref|YP_001283296.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|167970514|ref|ZP_02552791.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|215411646|ref|ZP_03420442.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 94_M4241A] gi|215427323|ref|ZP_03425242.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T92] gi|215430874|ref|ZP_03428793.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis EAS054] gi|215446167|ref|ZP_03432919.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T85] gi|219557918|ref|ZP_03536994.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis T17] gi|254232134|ref|ZP_04925461.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis C] gi|254364783|ref|ZP_04980829.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis str. Haarlem] gi|260186935|ref|ZP_05764409.1| hypothetical protein MtubCP_13013 [Mycobacterium tuberculosis CPHL_A] gi|260201057|ref|ZP_05768548.1| hypothetical protein MtubT4_13279 [Mycobacterium tuberculosis T46] gi|289443448|ref|ZP_06433192.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T46] gi|289447581|ref|ZP_06437325.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis CPHL_A] gi|289554259|ref|ZP_06443469.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 605] gi|289570054|ref|ZP_06450281.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T17] gi|289746097|ref|ZP_06505475.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|289750548|ref|ZP_06509926.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T92] gi|289754061|ref|ZP_06513439.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289758074|ref|ZP_06517452.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289762119|ref|ZP_06521497.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis GM 1503] gi|294996886|ref|ZP_06802577.1| hypothetical protein Mtub2_20868 [Mycobacterium tuberculosis 210] gi|297731521|ref|ZP_06960639.1| hypothetical protein MtubKR_10546 [Mycobacterium tuberculosis KZN R506] gi|298525458|ref|ZP_07012867.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306776196|ref|ZP_07414533.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu001] gi|306784727|ref|ZP_07423049.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu003] gi|306803683|ref|ZP_07440351.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu008] gi|306968080|ref|ZP_07480741.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu009] gi|306972305|ref|ZP_07484966.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu010] gi|307080016|ref|ZP_07489186.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu011] gi|307084590|ref|ZP_07493703.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu012] gi|308369573|ref|ZP_07418314.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu002] gi|308372102|ref|ZP_07427406.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu004] gi|308373284|ref|ZP_07431721.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu005] gi|308374452|ref|ZP_07436104.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu006] gi|308375733|ref|ZP_07444925.2| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu007] gi|313658854|ref|ZP_07815734.1| hypothetical protein MtubKV_10556 [Mycobacterium tuberculosis KZN V2475] gi|2950434|emb|CAA17837.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3A [Mycobacterium tuberculosis H37Rv] gi|13881678|gb|AAK46290.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124601193|gb|EAY60203.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis C] gi|134150297|gb|EBA42342.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis str. Haarlem] gi|148505925|gb|ABQ73734.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium tuberculosis H37Ra] gi|289416367|gb|EFD13607.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T46] gi|289420539|gb|EFD17740.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis CPHL_A] gi|289438891|gb|EFD21384.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 605] gi|289543808|gb|EFD47456.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T17] gi|289686625|gb|EFD54113.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis 02_1987] gi|289691135|gb|EFD58564.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis T92] gi|289694648|gb|EFD62077.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289709625|gb|EFD73641.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis GM 1503] gi|289713638|gb|EFD77650.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298495252|gb|EFI30546.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308215376|gb|EFO74775.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu001] gi|308327131|gb|EFP15982.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu002] gi|308330567|gb|EFP19418.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu003] gi|308334401|gb|EFP23252.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu004] gi|308338197|gb|EFP27048.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu005] gi|308341892|gb|EFP30743.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu006] gi|308345381|gb|EFP34232.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu007] gi|308349684|gb|EFP38535.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu008] gi|308354314|gb|EFP43165.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu009] gi|308358256|gb|EFP47107.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu010] gi|308362184|gb|EFP51035.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu011] gi|308365841|gb|EFP54692.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis SUMu012] gi|323719529|gb|EGB28655.1| hypothetical protein TMMG_01225 [Mycobacterium tuberculosis CDC1551A] gi|326903571|gb|EGE50504.1| hypothetical membrane protein yrbE3A [Mycobacterium tuberculosis W-148] gi|328458743|gb|AEB04166.1| integral membrane protein YrbE3A [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 105/252 (41%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + LG + T + +K + Q ++V +L++ Sbjct: 7 KAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMT 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + L+ GA FS +I + + ++T +++AG +A+ A++G+ Sbjct: 67 IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGAR 126 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 I EE+DA+R MG++ ++ L +PR+ A L + + +IGA + Sbjct: 127 TIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAG 186 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + + + ++ +IKA G++A +G +VG +G+ V VV + Sbjct: 187 AWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFI 246 Query: 356 IVIIIDSLFAIF 367 ++ +I+ + Sbjct: 247 VLFVINIVVTAV 258 >gi|120405557|ref|YP_955386.1| hypothetical protein Mvan_4605 [Mycobacterium vanbaalenii PYR-1] gi|119958375|gb|ABM15380.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 15/263 (5%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 +S ++ N +Q G + + G + LIR + Sbjct: 5 RPHSQFPWLKSQFARVADPWNHIGTQTKFYGRTLRSVGYVFTHYG------VELIRIIAQ 58 Query: 163 VGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 +G+ V +V ++ TGA++A QG S+ G E + + + +R I Sbjct: 59 MGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYSDFSELGVEALTGFVSAYFNVRLIAP 118 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 TA+ ++ G+ A++G+M+INEEIDA+ MG+ + L S R+ A + + L + Sbjct: 119 ATTAIALSATIGAGATAQLGAMRINEEIDALEVMGIRSIAFLASSRVIAGFLVVIPLYCV 178 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 A A Y V+ F + ++ + ++ I +V G+ Sbjct: 179 GVLMAFWAARFGTTVIYGQSTGVYDHYFKTFLNPTDLMWSFGQCIALSVIIMLVHTYYGY 238 Query: 334 AVGVHSNSLGKKVTTCVVQSISI 356 +G+ V V S+ + Sbjct: 239 TARGGPAGVGEAVGRAVRTSLIV 261 >gi|41407947|ref|NP_960783.1| hypothetical protein MAP1849 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254775059|ref|ZP_05216575.1| hypothetical protein MaviaA2_10356 [Mycobacterium avium subsp. avium ATCC 25291] gi|41396301|gb|AAS04166.1| hypothetical protein MAP_1849 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 286 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 45 VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ VR L Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A ++ LT + F+ + + + + F S F S AT ++ L+ Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMILALL 224 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV++I +++I++ + Y + Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280 >gi|254819658|ref|ZP_05224659.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 281 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 6/254 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178 H+L + + ++ G L L+ + VG V +++ Sbjct: 21 IIRLGHLLVFFVRAAVAVPLAVRQYSGEFLRLLSNITWGNGSIVVGGGTAGVAVVLGMTV 80 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L G + + S++ RE+ L+ ++ A + G A++GSM+I Sbjct: 81 GALVGIEGYNFLDLLGLGPATGFVSSLVNTRELAPLMASLAFAMQGGCRFTAQLGSMRIA 140 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A ++++ L + +V+ + Sbjct: 141 EEIDALESIAIRPIPYLVTTRLIASVVAIIPLYAACLAIGYLSTQVVVGIGSGGSTGSYL 200 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F +I LIKA + G+ +G + SI++VI Sbjct: 201 HYFTLMLAGQDIVYSLIKAVIFVWIASTIQCYYGYYASGGPEGVGVAAGHGMRASITVVI 260 Query: 359 IIDSLFAIFYFAIG 372 I++ L + + + Sbjct: 261 IVNMLLTMALWGVD 274 >gi|226365582|ref|YP_002783365.1| YrbE family protein [Rhodococcus opacus B4] gi|226244072|dbj|BAH54420.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 269 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 103/242 (42%) Query: 130 HILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQ 189 ++G I+ + K L+ Q + + +L+ G +IA Sbjct: 21 ALIGFSIATAVAAVRVVVRRKLAWRELLDQAWRIASVTSAPALLLMIPIGVLIAVTIGSL 80 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 Q GAE ++ ++ + + + L+ A+M+AG GSAI A++GS I EE++A+ +GL Sbjct: 81 AGQLGAEGYTGAVVGFVIVGQASALVCALMLAGVGGSAICADLGSRTIREEVEAMEVLGL 140 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D + L+ PR+ A +I L + + + + F + L++ Sbjct: 141 DVIERLVVPRVLAAVIVGVALCAMVTAVGVSACFLFQVVVQNSSAGSFLAALSQYTRLSD 200 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 L+K+ A +VA +G + + V VV + +V I++++ + Y Sbjct: 201 FVVALVKSMAFAVTSALVASFKGLHAKGGPSGVADAVNEAVVLAFILVFIVNTVLSQLYS 260 Query: 370 AI 371 + Sbjct: 261 VL 262 >gi|183980210|ref|YP_001848501.1| integral membrane protein YrbE6B [Mycobacterium marinum M] gi|183173536|gb|ACC38646.1| conserved hypothetical integral membrane protein YrbE6B [Mycobacterium marinum M] Length = 288 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 106/254 (41%), Gaps = 6/254 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178 H++ + + +++ + L+ + VG V VV+++ Sbjct: 28 LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITWGNGSIVVGGGTVGVVLVLGITA 87 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + S++ RE+ ++ A+ A ++G +IG+M++ Sbjct: 88 GALVAIEGYNFLNMMGIGPAIGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ M + + L++ R+ A +++ L I + + +++ + Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPYL 207 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F ++ +IKA +V GF +G + SI++VI Sbjct: 208 HYFTMLIDARDVGYSVIKAVVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVVI 267 Query: 359 IIDSLFAIFYFAIG 372 I++ + + +++ Sbjct: 268 IVNMVLTMALWSVD 281 >gi|118467326|ref|YP_879397.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|254773147|ref|ZP_05214663.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118168613|gb|ABK69510.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 285 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 108/265 (40%), Gaps = 8/265 (3%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 +G +V F+ + +L + ++ G + VG Sbjct: 22 AAPTMRLGHMLVFFVRAVLAVPTVLRQYRTEFLRLLSNIAWGNGSI--------VVGGGT 73 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +++ F GA++A +G L+ G + + S++ RE+ ++ ++ A ++G Sbjct: 74 AGVAVVLGFTAGALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCR 133 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+I EEIDA+ ++ + + L++ R+ A +I++ L I + +V Sbjct: 134 FTAQLGAMRIAEEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVAN 193 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 + F + +I ++K V GF +G Sbjct: 194 IISGGSIGPYLHYFTMMLSAKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAG 253 Query: 348 TCVVQSISIVIIIDSLFAIFYFAIG 372 + SI++VI+++ L + ++I Sbjct: 254 HAMRASITVVIMVNMLLTMALWSID 278 >gi|108797254|ref|YP_637451.1| hypothetical protein Mmcs_0274 [Mycobacterium sp. MCS] gi|119866339|ref|YP_936291.1| hypothetical protein Mkms_0284 [Mycobacterium sp. KMS] gi|126432878|ref|YP_001068569.1| hypothetical protein Mjls_0265 [Mycobacterium sp. JLS] gi|108767673|gb|ABG06395.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692428|gb|ABL89501.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232678|gb|ABN96078.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSG-------- 167 ++V S LG I G A + ++R + + + Sbjct: 13 RVVSQFRKPASLVGRLGDHILFYGRALAGTPHAAMHYRKEIVRLIAEISMGAGTLAMIGG 72 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V +V ++ G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 73 TVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 132 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEE+DA+ TMG+ + L+S RI A +I++ L +A + + + + Sbjct: 133 GVTAQLGAMRINEEVDALETMGIRPIEYLVSTRIIAGMIAITPLYSVAVILSFLASQLTT 192 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F++ ++ ++A MA + + G+ +G V Sbjct: 193 VVLFGQSGGLYDHYFNTFLNPVDLLWSFLQAILMALTVLFIHTYFGYFATGGPAGVGVAV 252 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V S+ +V+ + L ++ Sbjct: 253 GNAVRTSLIVVVAVTLLVSL 272 >gi|215425374|ref|ZP_03423293.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T92] gi|215433087|ref|ZP_03431006.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis EAS054] gi|219555965|ref|ZP_03535041.1| integral membrane protein YrbE1a [Mycobacterium tuberculosis T17] gi|260199170|ref|ZP_05766661.1| hypothetical protein MtubT4_03250 [Mycobacterium tuberculosis T46] gi|289441542|ref|ZP_06431286.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T46] gi|289568066|ref|ZP_06448293.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T17] gi|289748643|ref|ZP_06508021.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T92] gi|289756232|ref|ZP_06515610.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289414461|gb|EFD11701.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T46] gi|289541819|gb|EFD45468.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T17] gi|289689230|gb|EFD56659.1| hypothetical membrane protein yrbE1A [Mycobacterium tuberculosis T92] gi|289696819|gb|EFD64248.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 265 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 101/245 (41%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + ++G + +++ I Q +++ G I++S ++ Sbjct: 13 DQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPTIMVSIPLTVLL 72 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 L+QFGA S +I + ++G L T +++AG +AI A++G+ I EEID Sbjct: 73 IFTLNILLAQFGAADISGSGAAIGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEID 132 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+D + L+ PR+ A ++ LL L ++G + ++ + + Sbjct: 133 AMEVLGIDPIHRLVVPRVLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLT 192 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 L + IKA G+V G V S LG V VV + + ++ Sbjct: 193 LITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNV 252 Query: 363 LFAIF 367 + Sbjct: 253 ILTTI 257 >gi|145220617|ref|YP_001131295.1| hypothetical protein Mflv_0011 [Mycobacterium gilvum PYR-GCK] gi|145213103|gb|ABP42507.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 285 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 104/254 (40%), Gaps = 6/254 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY------YVGVSGVPVVILISFVT 178 H+L + + ++ + L+ + VG V I++ Sbjct: 25 IIRLGHMLVFFVRALLGIPVAISHYRKEFVRLLSDIAWGNGSLVVGGGTAGVAIVLGITV 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++ +G L G + + S++ RE+ + ++ A ++G A++GSM+I Sbjct: 85 GALVGIEGYNFLDMLGLGPATGIISSLVNTRELAPIAASLAFATQAGCRFTAQLGSMRIA 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++G+ + L++ R+ A +I++ L ++ + + V+ + Sbjct: 145 EEIDALESLGIRPIPYLVTTRLMASVIAVIPLYVVCLAVSYLTTQAVVMVISGGSTGSYM 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + +I ++K V GF +G + SI++VI Sbjct: 205 HYFTLMLSGQDILYSVLKTVIFVWIASTVQCYYGFYASGGPVGVGVAAGHAMRASITVVI 264 Query: 359 IIDSLFAIFYFAIG 372 +++ L + +++ Sbjct: 265 MVNMLLTMALWSVD 278 >gi|296165591|ref|ZP_06848116.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899064|gb|EFG78545.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 230 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 91/200 (45%) Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 + ++ ++ GA++A + L+ G S + +RE+ L+T V A ++G Sbjct: 19 ISILTILGVTIGAMVAIEAYATLNLIGLGALSGIIGGWGNIREMAPLVTGVAFASQAGCR 78 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 + AEIGSM+I +EIDA +MGL + ++ R+ +I + +L A + +VI Sbjct: 79 MTAEIGSMRIADEIDATESMGLRSIPFVVGTRLVGGMICVVPGFLLELMVAFFTSDLVIR 138 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y+ P + F + +I LIKA A ++ G+ +G+ Sbjct: 139 VSYNQPAGTYNHYFVQFLSPTDIGYSLIKAIIYCAAATLIHCYYGYFASGGPVGVGQASG 198 Query: 348 TCVVQSISIVIIIDSLFAIF 367 + S+ ++++D + + Sbjct: 199 RAIRASLVTIMVLDIMTTVM 218 >gi|54022502|ref|YP_116744.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014010|dbj|BAD55380.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 263 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 97/230 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + +S + I Q +++ + +L++ +++ Sbjct: 18 LRAVGGFFELSADVARASVRRPFQAREFIDQSWFIARVSIVPTLLVAIPFTVLVSFTLNI 77 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G ++T +++AG +AI A++G+ I EEIDA+R +G Sbjct: 78 LLREIGAADLSGAGAAFGAVTQVGPIVTVLIVAGAGATAICADLGARTIREEIDAMRVLG 137 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PR+ A + +L L I+G + D+ F + L Sbjct: 138 INPVQRLVVPRVLASMFVALMLNSLVCTIGIVGGFLFSVYLQDVNPGAFVNGITLLTHLP 197 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + +KA G+VA G V S+G V VV + + Sbjct: 198 ELIISEVKAGLFGLIAGLVACYLGLNVKGGPKSVGDAVNQTVVFAFMALF 247 >gi|254818556|ref|ZP_05223557.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 285 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 106/254 (41%), Gaps = 6/254 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178 + H+L + +++ L L+ + VG V +++ F Sbjct: 25 TMRLGHMLVFFVRAVLAVPIVLRQYRTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + + S++ RE+ ++ ++ A ++G A++G+M+I Sbjct: 85 GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ ++ + + L++ R+ A +I++ L I + +V + Sbjct: 145 EEIDALESLAIRPIPFLVTTRLMASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYL 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F + +I ++K V GF +G + SI++VI Sbjct: 205 HYFTMMLSTKDIAYSVLKCVVFVWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVI 264 Query: 359 IIDSLFAIFYFAIG 372 +++ L + ++I Sbjct: 265 MVNMLLTMALWSID 278 >gi|206889329|ref|YP_002249685.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741267|gb|ACI20324.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 223 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 1/212 (0%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +RQ+Y+ G+ VP V + + G +I Q A G+ ++ L L+EIG Sbjct: 8 FLRQIYFTGIQAVPAVTISGLLIGLIIVLQTASIAGT-GSSNMIGKILLWLVLKEIGPFF 66 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T ++I RSGSAI E+ +MK+ EI+ + MG+ LI PR++ ++ S +L+I Sbjct: 67 TGLIILTRSGSAIATELATMKLGREIEYLEAMGIKPEVYLIKPRLYGVVCSAVILSIYFQ 126 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 +A+ G + IPF+ + + ++ I +K+ I ++ + +G +V Sbjct: 127 LTAMFGGVFLATLMSGIPFSDYANAIVFHLSIKEIVISFLKSLIFGFLISLICIWQGLSV 186 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++ T V S+ + +ID + + Sbjct: 187 MKSPTEIPQRATKAVTGSLFSLFLIDVIIDVI 218 >gi|118619946|ref|YP_908278.1| integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99] gi|118572056|gb|ABL06807.1| conserved hypothetical integral membrane protein YrbE6B [Mycobacterium ulcerans Agy99] Length = 288 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 107/254 (42%), Gaps = 6/254 (2%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178 H++ + + +++ + L+ + VG V VV+++ Sbjct: 28 LARFGHMIAFYLHTVLAIPVALRRYRREFMRLLSDITWGNGSIVVGGGTVGVVLVLGITA 87 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + + S++ RE+ ++ A+ A ++G +IG+M++ Sbjct: 88 GALVAIEGYNFLNMMGIGPATGVVSSLVTTRELAPIMAALGFAVQAGCRFTTQIGAMRVA 147 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ M + + L++ R+ A +++ L I + + +++ + Sbjct: 148 EEIDALNAMAIRPIPYLVTTRLLASAVAIIPLYIACLTISYLSCQLMVTFTTHGSVGPYL 207 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F ++ +IKA +V GF +G + SI++VI Sbjct: 208 HYFTMLIDARDVGYSVIKAAVFVALASVVQCYYGFCAEGGPEGVGVAAGHAMRASITVVI 267 Query: 359 IIDSLFAIFYFAIG 372 I++ + + +++ Sbjct: 268 IVNMVLTMALWSVD 281 >gi|145222687|ref|YP_001133365.1| hypothetical protein Mflv_2099 [Mycobacterium gilvum PYR-GCK] gi|315443151|ref|YP_004076030.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145215173|gb|ABP44577.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315261454|gb|ADT98195.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 255 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 104/239 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G S + + K I Q ++V + ++++ ++ Sbjct: 11 MRAFGGFFSMALDTFVAMVKPPFAWREFISQSWFVARVSIVPTLMLTIPYTVLLTFTFNI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FGA FS ++ +R+IG ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 71 LLTEFGAADFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ ++ L+ PR+ A + L+ + GA ++ F + Sbjct: 131 VNPIQALVVPRVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLIIGAT 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA + G++A +G +VG +G V VV + + I+ + Sbjct: 191 DVIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVATAV 249 >gi|169631591|ref|YP_001705240.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243558|emb|CAM64586.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 285 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 8/268 (2%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N + G + F +L + G L VG Sbjct: 19 NRIRRPLMRFGHMVAFFFRALSGIPVVLRQYSKEFLRHLSDIAWGNGSL--------VVG 70 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V +++ GA++A + L G + + S+ RE+ ++ ++ A ++ Sbjct: 71 GGTAGVALVLGVTAGALVAIESYNFLDLLGLGPATGIISSLASTRELAPIMASLAFAMQA 130 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G A++GSM+I EEIDA+ ++ + + L++ R+ A II++ L + + + + Sbjct: 131 GCRFTAQLGSMRIAEEIDAMDSVAIRPIPFLVTTRLMAAIIAVIPLYLACLAISYVSCQV 190 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 ++ + F + +I +IK V GF +G Sbjct: 191 MVGILSGGSVGSYLHYFGIGVSGIDIVYSIIKTVVFVWIASTVQCYYGFYASGGPEGVGI 250 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFAIG 372 + +I++V++++ L + +++ Sbjct: 251 AAGHAMRAAITVVVMVNMLLTMALWSVD 278 >gi|118462658|ref|YP_881590.1| hypothetical protein MAV_2390 [Mycobacterium avium 104] gi|118163945|gb|ABK64842.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 286 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 104/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 45 VRTIQYFFYDLITGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 104 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ VR L Sbjct: 105 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRL 164 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A ++ LT + F+ + + + + F S S AT ++ L+ Sbjct: 165 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTSASFATTGDMILALL 224 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV++I +++I++ + Y + Sbjct: 225 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 280 >gi|296138973|ref|YP_003646216.1| hypothetical protein Tpau_1246 [Tsukamurella paurometabola DSM 20162] gi|296027107|gb|ADG77877.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 285 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 5/251 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ-MYYVGVSGVPVVILISF 176 +V I +L + + + + Q Y +GV+ P + LI+ Sbjct: 29 VVDSIRTMGRAVRML---VLTLVSMVTDIVRGQLQWKETLYQTWYMIGVTAFPGI-LIAI 84 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G VI+ Q + Q GA+ S + + + + T +++AG SAI A++G+ Sbjct: 85 PFGIVISIQVGNIIHQLGADSLSGAAGGLAVIAQGAPIATGLLLAGAGASAIAADLGART 144 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I EE DA+R MG++ + L+ PR+ A I PLL +L I +V + Sbjct: 145 IREETDAMRVMGINPINRLVVPRLLAAWIVSPLLNLLIIGVGTIAGYLVAVGGQGVTPGA 204 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ F S A +++ L+K+ I I+ + G S + V VV S + Sbjct: 205 YWLSFGSFAHPIDVWISLVKSIIFGTIIAIIGCQRGLEAKGGSRGVADGVNATVVLSFVV 264 Query: 357 VIIIDSLFAIF 367 + ++ L Sbjct: 265 IFAVNLLITQI 275 >gi|311743966|ref|ZP_07717772.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311313096|gb|EFQ83007.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 275 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 105/254 (41%), Gaps = 7/254 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL-----I 174 + +Q G I + L+ + G V + + Sbjct: 13 SMLALVGTQMTFAGRAIGSIPMTLRHYRA--EVFRILLDISWGTGALLVGGGTVGVMVLL 70 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + G + +G L G + + +++ RE+ L+ A+ +A + G A++GS Sbjct: 71 AVSAGTSLGIEGFNGLETIGLAPLTGFISAVVNTRELAPLVAALALAAQVGCRFTAQLGS 130 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+ +EEIDA+ M + + L++ R+ A ++++ L ++ + + + + + + P Sbjct: 131 MRTSEEIDALSVMAVPAIPYLVTTRLIASMLAILPLYMIGLVGSYLASQLAVTVLFGQPV 190 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + F + L +I ++K A A+ ++ GF + +G+ + SI Sbjct: 191 GTYQHYFGTFIALEDIALSIVKVLVFAFAVTLIHCWYGFMASGGAEGVGEATGRAIRASI 250 Query: 355 SIVIIIDSLFAIFY 368 +V++++ + + + Sbjct: 251 VVVVLLNMILTLVF 264 >gi|169631108|ref|YP_001704757.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169243075|emb|CAM64103.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 292 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 111/282 (39%), Gaps = 7/282 (2%) Query: 92 KIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG 151 + ++ K Q +GLV++ + + G Sbjct: 2 ATSRPSRYFPDELPAAVRSVWNFTKGAGGSAEYLGHQITFVGLVLAAIPQTLKRYRRQTG 61 Query: 152 FLLSLIRQMYYVG-----VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 L L+ + G + V++ + GA + G L G + + + + Sbjct: 62 IL--LVDMTWGNGSIIVGGGVIGVLVFMGIAVGASVGIVGFSTLDMVGMGSLTGFISAYV 119 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 RE+ ++ A+ A ++G + AEIG+M+I+EEIDA+ G+ + +++ R+ A II Sbjct: 120 NTREMAPMIAAIGFAAQAGCRMTAEIGAMRISEEIDALEAQGIRSIPFVVTTRVIAGIII 179 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 + L +L A + +++ ++ V+ F S ++ +IKA I Sbjct: 180 IVPLYVLTLLLAYGSCAFMVFFVHNQSQGVYKHYFDSFVHPVDVLYSVIKAVVFVVIIIA 239 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 + +G+ G +G + S+ V++ D L + + Sbjct: 240 IQCYQGYYAGGGPEGVGMASGRAIRASLVAVVLFDMLLTLLF 281 >gi|328951866|ref|YP_004369200.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] gi|328452190|gb|AEB08019.1| protein of unknown function DUF140 [Desulfobacca acetoxidans DSM 11109] Length = 274 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 120/244 (49%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S A+I GL +++ RQ+Y +G G P+V L + G I Sbjct: 31 SLANIFGLFYRLLTLGLVGMTRYRLIRREFARQIYLIGGRGWPIVALTGMLLGLAIIVYA 90 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + QL++ G E F +L+ I+ +RE+G +LTA+++ RSG+A++ EIG M + EI+A+ Sbjct: 91 SAQLAKIGGEQFVGNLLVIIVIRELGPVLTALLVLLRSGAAMIVEIGGMVLEREIEALEL 150 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 MGL+ ++ PR W L+ISL L + A+ G + + D+ + VF+ F + Sbjct: 151 MGLEPEIVIGGPRFWGLVISLITLYFIFVVCAVWGGFLFSQIFADMYWGVFWLSFVNALG 210 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++ K IG+VA+ G H S+ + + V S+ + +I++ ++ Sbjct: 211 WPDLVLNFAKVVLFGMFIGVVAIYHGLQTADHWESIVAQTSRGAVISLLFLGLINTALSV 270 Query: 367 FYFA 370 Y Sbjct: 271 LYNV 274 >gi|302327111|gb|ADL26312.1| putative ABC transporter, permease protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 262 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 9/247 (3%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 ++ L + S+ FK ++I Q ++ GV P + ++ + G V+ + Sbjct: 4 LIALFLRTVASLFDKSHNFKSDSRNIILQTFFTGVEIFPPLFAVATLFGTVVIIYLFSLM 63 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 + G L+ ++ +RE+ + TA +IAGR+GS++ IGSM IN E+DA+ TMG++ Sbjct: 64 GKMGFSNNIGFLIVVIIIRELSPIFTAFLIAGRTGSSLTTYIGSMVINSEVDALATMGIN 123 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY---------DIPFAVFFSRF 301 +R L+ P + I++ ++ I+ + SAI ++ I ++ + Sbjct: 124 PIRYLVMPSVIGGTIAMIIMNIIFSTSAIGAGFLLTKGIIFITGNAPNVQITWSYLSTEI 183 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 T + ++K I I A + + + K + V+ S ++ D Sbjct: 184 IKALTKPDFVFAIVKPLIFGIIITINACYQALNIKRDIRQVPKATSRSVIMSFLYIVFTD 243 Query: 362 SLFAIFY 368 +LF +++ Sbjct: 244 ALFLMYF 250 >gi|254819657|ref|ZP_05224658.1| hypothetical protein MintA_07029 [Mycobacterium intracellulare ATCC 13950] Length = 280 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 39 VRTVQYFFVDLITGRFQWHEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 98 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 99 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 158 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A ++ LT + F+ + + + + F S F S AT ++ L+ Sbjct: 159 VVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDMVLALL 218 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + IV+ ++G + + V VV++I +++I++ + Y + Sbjct: 219 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIML 274 >gi|284042176|ref|YP_003392516.1| hypothetical protein Cwoe_0708 [Conexibacter woesei DSM 14684] gi|283946397|gb|ADB49141.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 272 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 115/243 (47%), Gaps = 3/243 (1%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFL-LSLIRQMYYVGVSG-VPVVILISFVTGAVI 182 +G ++ TG+ S+ + + Q + +P+++ ++ ++ +V Sbjct: 17 LRDALEEVGDMLILTGKTLVSAIRPPYPYGDEFVSQFMFALRQCFLPLILTMACISYSVP 76 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 Q A L FGA L + +RE ++ A+++AG +G+AI A++G+ KI EE+D Sbjct: 77 GLQAANFLMLFGALDRMGGLFVLAVIREFAPIVCAIVVAGAAGTAITADLGARKIREELD 136 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A++ +G+D V+ L+ PR ALI L + A I G + D FF+ F Sbjct: 137 ALQVLGVDPVKNLVVPRFLALIAITALFDVFAIVFGITGG-LAATLLNDARIEPFFATFW 195 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 ++++ +++ L+K IV +G V + +G+ V +V + + +++ Sbjct: 196 TSSSTTDLWGSLLKCTIFGGVTAIVCCYKGMTVSGGAAGVGRAVNQAIVIAFLAIGVVNY 255 Query: 363 LFA 365 +F Sbjct: 256 VFT 258 >gi|171463508|ref|YP_001797621.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193046|gb|ACB44007.1| protein of unknown function DUF140 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 216 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 5/201 (2%) Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 L S + G +++ Q A + QFGA F L ++ +RE+G ++TA+++AGRS +A E Sbjct: 20 WLGSLLIGVILSFQAAIGMQQFGAVSFVGPLAALDIVREMGPIITAILLAGRSSAAFAVE 79 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG+M +N E+DA+ + L+ RI A I+ P+LT+ A+ +I + + Y Sbjct: 80 IGTMTVNSEVDAL----VSGGYFLVVSRILAGILVAPILTLFADIVSIFSSML-TMLIYG 134 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 IPF F++ S + +I +GL+KA I + G G + ++G T VV Sbjct: 135 IPFVNFYNGMLSAVDVEDILSGLLKATLFGVVISAMGCLRGMQTGTGAAAVGISATRAVV 194 Query: 352 QSISIVIIIDSLFAIFYFAIG 372 SI +++I+D +FA + G Sbjct: 195 SSIVMIVIVDGIFAFISYKTG 215 >gi|183983837|ref|YP_001852128.1| YrbE family protein, YrbE5A [Mycobacterium marinum M] gi|183177163|gb|ACC42273.1| YrbE family protein, YrbE5A [Mycobacterium marinum M] Length = 289 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 102/232 (43%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 48 VRTIQYFFVDLVTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 107 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 108 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 167 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + + F + F S AT ++F L Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALF 227 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 KA + +V+ ++G + + V VV+SI +++I++ + Sbjct: 228 KAVIFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279 >gi|229494350|ref|ZP_04388113.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|229318712|gb|EEN84570.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 284 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 4/250 (1%) Query: 123 NDSCSQAHILGLVISNTGEF----CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 N + +GL+ + T S + + QM+++ L+ Sbjct: 25 NMFSNLLSEIGLLFTFTVRVCVAAFTSLRHKRLAWREALDQMWFLAHVTSVASALVMIPL 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 G +A Q Q GA +S +++ L + + G L+ A++IAG GSAI A++G+ I Sbjct: 85 GVGVALQIGALADQIGAGAYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIR 144 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +GL + L+ PR+ A+ + LL + + + V D F Sbjct: 145 EEIDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFL 204 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 + ++ IKA A GIVA +G V + +G V VV S +V Sbjct: 205 RNLVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVF 264 Query: 359 IIDSLFAIFY 368 + + FY Sbjct: 265 VANLAITQFY 274 >gi|226304168|ref|YP_002764126.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226183283|dbj|BAH31387.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 259 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 3/249 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 +++ V + + QM+++ L+ G Sbjct: 4 NLLSEIGLLFTFTVRVCVAAFTTLRHK---RLAWREALDQMWFLAHVTSVASALVMIPLG 60 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +A Q Q GA +S +++ L + + G L+ A++IAG GSAI A++G+ I E Sbjct: 61 VGVALQIGSLADQIGAGSYSGAVVAFLIIGQAGPLVCALIIAGVGGSAICADLGARTIRE 120 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +GL + L+ PR+ A+ + LL + + + V D F Sbjct: 121 EIDALEVLGLPVLERLVVPRMIAIAVVCLLLNSIVLVIGLGASLFVHVLILDGNAQSFLR 180 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVII 359 + ++ IKA A GIVA +G V + +G V VV S +V + Sbjct: 181 NLVQFSQPSDFVVSGIKAVAFALISGIVACYKGLTVKRGAQGVGDAVNETVVLSFVLVFV 240 Query: 360 IDSLFAIFY 368 + FY Sbjct: 241 ANLAITQFY 249 >gi|145225117|ref|YP_001135795.1| hypothetical protein Mflv_4539 [Mycobacterium gilvum PYR-GCK] gi|315445484|ref|YP_004078363.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145217603|gb|ABP47007.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315263787|gb|ADU00529.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 282 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 16/267 (5%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG- 167 L +G+ + + G ++ + +IR + + + Sbjct: 10 QLVRRLGRPV-DTLGGIGEHTAFYGRALAGVPHAVVHYRR------EIIRLVAEISMGAG 62 Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 V +V ++ G +A QG L G E + L + + +R ++ + Sbjct: 63 TLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIG 122 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +A G+ + A++G+M+INEEIDA+ TMG+ V L+S RI A +I++ L +A + Sbjct: 123 LAATFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSF 182 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 + + + + ++ F + ++ ++A MA A+ +V G+ G Sbjct: 183 LASKLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAGGGP 242 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G V V S+ +VI + L ++ Sbjct: 243 SGVGVAVGNAVRTSLIVVISVTLLVSL 269 >gi|312138208|ref|YP_004005544.1| integral membrane protein yrbe2a [Rhodococcus equi 103S] gi|311887547|emb|CBH46859.1| putative integral membrane protein YrbE2A [Rhodococcus equi 103S] Length = 275 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 100/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + + + + + + Q ++V + +L++ +++ Sbjct: 30 LRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 89 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+R +G Sbjct: 90 LLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAMRVLG 149 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 150 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLLTGFG 209 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G++A G V + S+G V VV S + +++ L Sbjct: 210 ELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 268 >gi|120404938|ref|YP_954767.1| hypothetical protein Mvan_3984 [Mycobacterium vanbaalenii PYR-1] gi|119957756|gb|ABM14761.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 257 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 104/239 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + + ++ + Q ++V V ++++ ++ Sbjct: 12 VRALGGFFAMSLDTFILMFQRPFAFREYVIQTWFVARVSVLPALMLTMPYSVLLVFTFNI 71 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FGA FS +I + +IG ++T ++++G +A+ A++G+ I +E+DA+R MG Sbjct: 72 LLNEFGASDFSGTGAAIGTVNQIGPIVTVLVVSGAGATAMCADLGARTIRDELDALRVMG 131 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PR+ A L+ + GA + + F S Sbjct: 132 INPVQALVVPRVLAATTVALALSASVIIVGLAGAFLFCVYVQHVSAGAFISGLTLLTGAG 191 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ LIKA A G++A +G VG +G V VV + ++ I+ + Sbjct: 192 DVVVSLIKATLFGAAAGLIACYKGVYVGGGPAGVGNAVNETVVFTFMVLFAINVIVTAV 250 >gi|120405558|ref|YP_955387.1| hypothetical protein Mvan_4606 [Mycobacterium vanbaalenii PYR-1] gi|119958376|gb|ABM15381.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 255 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 105/239 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G S + + ++ I Q ++V + +L++ ++ Sbjct: 11 VRAFGGFYSMALDTFVAMFQPPFAWREFISQAWFVARVSILPTLLLTIPYTVLLTFIETI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++ GA FS ++ +R+IG ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 71 LLTEIGASDFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ ++ L+ PR+ A ++ L+ + GA + D+ F + Sbjct: 131 INPIQALVVPRVLAAMVVSLALSATVILVGLSGAYFFVVYIQDVSPGAFAAGLTLIIGAT 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA + G++A +G +V +G V VV + + I+ + Sbjct: 191 DVVIALVKAALFGLSAGLIACYKGISVRGGPAGVGNAVNETVVFTFMALFAINIVATAV 249 >gi|108800638|ref|YP_640835.1| hypothetical protein Mmcs_3672 [Mycobacterium sp. MCS] gi|119869777|ref|YP_939729.1| hypothetical protein Mkms_3745 [Mycobacterium sp. KMS] gi|108771057|gb|ABG09779.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119695866|gb|ABL92939.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 285 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 107/267 (40%), Gaps = 5/267 (1%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + +G+ + +G V T F + + Sbjct: 11 YPRLARGVRRPVDVLGR----LGDHMLFYIRAIGGVPHATLHFRKEIIRLIAEISMGAGT 66 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + +G + +V ++ G +A QG L G E + L + + +R + + Sbjct: 67 LAMIG-GTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIG 125 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +A G+ + A++G+M+INEEIDA+ +M + V L+S RI A +I++ L +A + Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSF 185 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 + + + ++ F + ++ ++A MA I +V G+ Sbjct: 186 VASQFTTVMLFGQSAGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGP 245 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G V V S+ +V+ + L ++ Sbjct: 246 SGVGVAVGNAVRTSLILVVSVTLLVSL 272 >gi|54023081|ref|YP_117323.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014589|dbj|BAD55959.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 288 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 3/260 (1%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSY--KFKGFLLSLI-RQMYYVGVSGV 168 G +++ I A + V+S + + R VG V Sbjct: 18 VRRGGLVLRGIESFGFVAVFVWQVLSAVPLTLSRYRAETMRAITNMTWGRGSIVVGGGTV 77 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P+++++ V GA + + L G + + + RE+ + AV A ++G I Sbjct: 78 PMMVVLGLVMGASVGVESFATLDMLGMGPVTGIVSAYATTRELAPIAAAVGFAAQAGCRI 137 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AEIGSM+I+EEIDAI ++GL V +++ R+ A +++ ++A A +I Sbjct: 138 TAEIGSMRISEEIDAIESLGLRSVPFVVTTRVIAGALAIVPTFLIALILAYAACRGLITL 197 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 + V+ F + ++ +IK + +V GF +G Sbjct: 198 LHGQSAGVYDHYFFQFVSGFDVIAAVIKVAVFGTVVILVHSYYGFFAKGGPEGVGIASGR 257 Query: 349 CVVQSISIVIIIDSLFAIFY 368 V S +I ID + +I Sbjct: 258 AVRTSFVAIIAIDMVLSIVL 277 >gi|126436744|ref|YP_001072435.1| hypothetical protein Mjls_4172 [Mycobacterium sp. JLS] gi|126236544|gb|ABN99944.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 257 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 106/239 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + + ++ + Q ++V + I+++ + Sbjct: 13 MRALGGFFAMSLDAFVQMFRPPFAWREFLLQTWFVARVALFPTIMLAIPFTVLTVFTINV 72 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA FS ++ + +IG ++T ++IAG +A+ A++G+ I EEIDA+R +G Sbjct: 73 LLVEIGAADFSGTGAALGAVTQIGPIVTVLVIAGAGATAMCADLGARTIREEIDALRVLG 132 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ ++ L+ PRI A + +LT L I+G+ I + ++ F + Sbjct: 133 INPIQALVVPRIVAATVVSLMLTSLVTMVGIVGSFIFSVYFQNVTPGAFAAGLTLLVGTP 192 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + L+KA A ++A +G +VG +G V VV + + +I+ + Sbjct: 193 EVVVNLLKAAIFGLAASLIACYKGISVGGGPQGVGNAVNETVVYTFMALFVINVIATAV 251 >gi|183984680|ref|YP_001852971.1| hypothetical protein MMAR_4712 [Mycobacterium marinum M] gi|183178006|gb|ACC43116.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length = 268 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 104/240 (43%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + +++ + Q ++V + +L++ +++ Sbjct: 22 MQAVGGLFAMSADAIKFAFRRPFQWREFLEQSWFVARVAMLPTLLVAIPFTVLVSFTLNI 81 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 82 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 141 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G + D+ F + + Sbjct: 142 INPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 201 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G G + ++G V VV + + +++ + Sbjct: 202 EVIISCVKAALFGLIAGLVACYRGLTISGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 261 >gi|126436262|ref|YP_001071953.1| hypothetical protein Mjls_3685 [Mycobacterium sp. JLS] gi|126236062|gb|ABN99462.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 285 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 108/267 (40%), Gaps = 5/267 (1%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + +G+ + +G V T F + + Sbjct: 11 YPRLARGVRRPVDVLGR----LGDHMLFYIRAIGGVPHATVHFRKEIIRLIAEISMGAGT 66 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + +G + +V ++ G +A QG L G E + L + + +R + + Sbjct: 67 LAMIG-GTLVIVGFLTLAAGGTLAVQGFSSLGDIGIEALTGFLAAFINVRIAAPTVAGIG 125 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +A G+ + A++G+M+INEEIDA+ +M + V L+S RI A +I++ L +A + Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMAIRPVEYLVSTRIAAGMIAITPLYAIAVILSF 185 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 + + V + ++ F + ++ ++A MA I +V G+ Sbjct: 186 LASQFVTVMLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAITILLVHTYFGYFASGGP 245 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G V V S+ +V+ + L ++ Sbjct: 246 SGVGVAVGNAVRTSLILVVSVTLLVSL 272 >gi|120401936|ref|YP_951765.1| hypothetical protein Mvan_0921 [Mycobacterium vanbaalenii PYR-1] gi|119954754|gb|ABM11759.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 9/256 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY-VGVSG-----VPV 170 + N +Q G + + G+ + + I QM G + + Sbjct: 19 GLAAGWNRIGTQTEFYGRTVRSIGDAVVHY---RTEIAVQIAQMSLGTGALAVVGGTIVI 75 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ GA+IA QG L+ G E + + L +R IG L T + +A G+ A Sbjct: 76 VGFLTMSAGALIAVQGYNTLAGVGVEALTGFASAYLNVRIIGPLTTGIGLAATIGAGATA 135 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+I EEIDA+ MG+ + L S R+ A +I + L +A + + A + Y Sbjct: 136 QLGAMRIAEEIDALEVMGVRSIAYLASTRLLAGMIVVIPLYCVAVLMSFVAARVGTTAIY 195 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 V+ F + ++ ++A MA + ++ GF +G+ V V Sbjct: 196 GQSTGVYDHYFTTFLNPLDLVWSFVQAIAMAVTVMVIHTYYGFNASGGPAGVGEAVGRAV 255 Query: 351 VQSISIVIIIDSLFAI 366 S+ +V+ + + ++ Sbjct: 256 RASLIVVVFVTLVISL 271 >gi|118473565|ref|YP_887174.1| hypothetical protein MSMEG_2854 [Mycobacterium smegmatis str. MC2 155] gi|118174852|gb|ABK75748.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 281 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 15/272 (5%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + ++ V G ++ T + +IR + + Sbjct: 3 VRTLHPRLTRELRRPVDVAGRLGDHTSFYGRALAGTPHAAMHYRR------EVIRLIAEI 56 Query: 164 GVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 + V +V ++ G +A QG L G E + L + + +R + Sbjct: 57 SMGAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPV 116 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 + + +A G+ + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A Sbjct: 117 VAGIGLAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVA 176 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + +++ + ++ F + ++ ++A MA AI +V GF Sbjct: 177 VILSFAASNLTTVVMFGQSAGLYNHYFSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFF 236 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G V V S+ +VI + L ++ Sbjct: 237 AAGGPSGVGVAVGNAVRTSLIVVIAVTLLVSL 268 >gi|145223093|ref|YP_001133771.1| hypothetical protein Mflv_2506 [Mycobacterium gilvum PYR-GCK] gi|145215579|gb|ABP44983.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 269 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 1/250 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + N +G S + + + Q ++V + +L++ Sbjct: 13 ISLPNGLSGAMQAVGGFFSMALDAVRFVFVRPFQWREFLEQSWFVAKVSMAPTLLVAIPF 72 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 +++ L + GA S + + ++G L+T +++AG +A+ A++GS I Sbjct: 73 TVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIR 132 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +G++ V+ L++PR+ A + LL L I+G D+ F Sbjct: 133 EEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFA 192 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357 + + + +KA G+VA G G + ++G V VV + + Sbjct: 193 AGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMAL 252 Query: 358 IIIDSLFAIF 367 +I+ + Sbjct: 253 FVINVVVTAI 262 >gi|325674886|ref|ZP_08154573.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] gi|325554472|gb|EGD24147.1| membrane protein YrbE4A [Rhodococcus equi ATCC 33707] Length = 263 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 100/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G + + + + + + Q ++V + +L++ +++ Sbjct: 18 LRAAGGFFAMSADTLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 77 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+R +G Sbjct: 78 LLREIGAADLSGAGAALGAVTQVGPIVTVLIVAGAGATAICADLAARTIREEIDAMRVLG 137 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 138 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFLFSVYVQDVNPGAFVNGITLLTGFG 197 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G++A G V + S+G V VV S + +++ L Sbjct: 198 ELMISMLKAGLFGMIAGLMAAYLGMNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 256 >gi|315443550|ref|YP_004076429.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261853|gb|ADT98594.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 269 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 1/250 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + N +G S + + + Q ++V + +L++ Sbjct: 13 ISLPNGVSGAMQAVGGFFSMALDAVRFVFVRPFQWREFLEQSWFVAKVSMAPTLLVAIPF 72 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 +++ L + GA S + + ++G L+T +++AG +A+ A++GS I Sbjct: 73 TVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIR 132 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +G++ V+ L++PR+ A + LL L I+G D+ F Sbjct: 133 EEIDAMEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFVQDVNPGAFA 192 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357 + + + +KA G+VA G G + ++G V VV + + Sbjct: 193 AGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMAL 252 Query: 358 IIIDSLFAIF 367 +I+ + Sbjct: 253 FVINVVVTAI 262 >gi|118619125|ref|YP_907457.1| integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] gi|118571235|gb|ABL05986.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium ulcerans Agy99] Length = 255 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 100/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G S + + I Q ++V + ++++ ++ Sbjct: 11 LRAFGGFYSMALDTFVAMVHPPFAWREYIAQAWFVARVSLLPTLMLTIPYTVLLTFIENI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++ GA FS ++ +R+IG ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 71 LLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D ++ L+ PR+ A L+ + GA + F + Sbjct: 131 VDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLIIGTT 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA + G++A +G +VG +G V VV + + I+ + Sbjct: 191 DVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVATAV 249 >gi|120403834|ref|YP_953663.1| hypothetical protein Mvan_2850 [Mycobacterium vanbaalenii PYR-1] gi|119956652|gb|ABM13657.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 282 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 110/267 (41%), Gaps = 16/267 (5%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG- 167 L IG+ + G ++ K +IR + + + Sbjct: 10 RLAQQIGRPVGALGR-IGDHTSFYGRALAGVPHAAMHYRK------EIIRLVAEISMGAG 62 Query: 168 --------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + +V ++ G +A QG L G E + L + + +R ++ + Sbjct: 63 TLAMIGGTIVIVGFLTLAAGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIG 122 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +A G+ + A++G+M+INEEIDA+ TMG+ V L+S RI A +I++ L +A + Sbjct: 123 LAATFGAGVTAQLGAMRINEEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSF 182 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 + + + ++ F + ++ ++A MA A+ +V G+ Sbjct: 183 AASKLTTVVLFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFATGGP 242 Query: 340 NSLGKKVTTCVVQSISIVIIIDSLFAI 366 + +G V V S+ +VI + L ++ Sbjct: 243 SGVGVAVGNAVRTSLIVVISVTLLVSL 269 >gi|118469944|ref|YP_887173.1| hypothetical protein MSMEG_2853 [Mycobacterium smegmatis str. MC2 155] gi|118171231|gb|ABK72127.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 270 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 105/252 (41%), Gaps = 1/252 (0%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + + +G + + + + +++ + Q ++V + +L++ Sbjct: 12 GLRVLRGGTSTTLEAIGGLFAMSSDAVRFAFRRPFQGREFLEQSWFVARVSLAPTLLVAI 71 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +++ L + GA S + + ++G ++T +++AG +A+ A++GS Sbjct: 72 PFTVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRT 131 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I +EIDA+ +G++ ++ L++PRI A + LL L I+G + Sbjct: 132 IRDEIDAMEVLGINPIQRLVTPRILASGLVALLLNSLVVIIGILGGYTFSVFIQGVNPGA 191 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSIS 355 F + + + IKA G+VA G G + ++G V VV + Sbjct: 192 FAAGITLLTGVPEVIISCIKAMLFGFIAGMVACFRGLTIAGGGAKAVGNAVNETVVYAFM 251 Query: 356 IVIIIDSLFAIF 367 + +++ + Sbjct: 252 ALFVVNVVVTAI 263 >gi|118619035|ref|YP_907367.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99] gi|118571145|gb|ABL05896.1| YrbE family protein, YrbE5A [Mycobacterium ulcerans Agy99] Length = 289 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 57/232 (24%), Positives = 102/232 (43%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 48 VRTIQYFFVDLVTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 107 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MGL +R L Sbjct: 108 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRL 167 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + + F + F S AT ++F L Sbjct: 168 VVPRFAAAIMIGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALF 227 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 KA + +V+ ++G + + V VV+SI +++I++ + Sbjct: 228 KAVMFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMIVNVSISQL 279 >gi|183984020|ref|YP_001852311.1| integral membrane protein YrbE3A_1 [Mycobacterium marinum M] gi|183177346|gb|ACC42456.1| conserved hypothetical integral membrane protein YrbE3A_1 [Mycobacterium marinum M] Length = 255 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 100/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 G S + + I Q ++V + ++++ ++ Sbjct: 11 LRAFGGFYSMALDTFVAMVHPPFAWREYIAQAWFVARVSLLPTLMLTIPYTVLLTFIENI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++ GA FS ++ +R+IG ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 71 LLTEIGAADFSGTGAALGSVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D ++ L+ PR+ A L+ + GA + F + Sbjct: 131 VDPIQALVVPRVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLIIGTT 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L+KA + G++A +G +VG +G V VV + + I+ + Sbjct: 191 DVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINIVATAV 249 >gi|226364205|ref|YP_002781987.1| YrbE family protein [Rhodococcus opacus B4] gi|226242694|dbj|BAH53042.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 254 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 101/239 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +GE + + + Q ++V + +L++ +++ Sbjct: 9 LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+R +G Sbjct: 69 LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G V + S+G V VV S + +++ L Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247 >gi|15607727|ref|NP_215101.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Rv] gi|15839989|ref|NP_335026.1| hypothetical protein MT0616 [Mycobacterium tuberculosis CDC1551] gi|31791769|ref|NP_854262.1| integral membrane protein YrbE2a [Mycobacterium bovis AF2122/97] gi|121636505|ref|YP_976728.1| integral membrane protein YrbE2a [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660356|ref|YP_001281879.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra] gi|148821789|ref|YP_001286543.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis F11] gi|167969010|ref|ZP_02551287.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis H37Ra] gi|215402355|ref|ZP_03414536.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|215410128|ref|ZP_03418936.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 94_M4241A] gi|215425819|ref|ZP_03423738.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T92] gi|215444700|ref|ZP_03431452.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T85] gi|218752227|ref|ZP_03531023.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis GM 1503] gi|219556429|ref|ZP_03535505.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis T17] gi|224988977|ref|YP_002643664.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797521|ref|YP_003030522.1| hypothetical protein TBMG_00594 [Mycobacterium tuberculosis KZN 1435] gi|254230927|ref|ZP_04924254.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis C] gi|254363545|ref|ZP_04979591.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis str. Haarlem] gi|254549542|ref|ZP_05139989.1| hypothetical protein Mtube_03615 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185464|ref|ZP_05762938.1| hypothetical protein MtubCP_05434 [Mycobacterium tuberculosis CPHL_A] gi|260199592|ref|ZP_05767083.1| hypothetical protein MtubT4_05534 [Mycobacterium tuberculosis T46] gi|260203751|ref|ZP_05771242.1| hypothetical protein MtubK8_05499 [Mycobacterium tuberculosis K85] gi|289441976|ref|ZP_06431720.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T46] gi|289446140|ref|ZP_06435884.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis CPHL_A] gi|289552840|ref|ZP_06442050.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 605] gi|289568520|ref|ZP_06448747.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T17] gi|289573187|ref|ZP_06453414.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85] gi|289744301|ref|ZP_06503679.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|289749084|ref|ZP_06508462.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T92] gi|289756666|ref|ZP_06516044.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289760706|ref|ZP_06520084.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis GM 1503] gi|294996099|ref|ZP_06801790.1| hypothetical protein Mtub2_16765 [Mycobacterium tuberculosis 210] gi|297633081|ref|ZP_06950861.1| hypothetical protein MtubK4_03105 [Mycobacterium tuberculosis KZN 4207] gi|297730059|ref|ZP_06959177.1| hypothetical protein MtubKR_03150 [Mycobacterium tuberculosis KZN R506] gi|298524074|ref|ZP_07011483.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306774691|ref|ZP_07413028.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu001] gi|306781579|ref|ZP_07419916.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu002] gi|306783229|ref|ZP_07421551.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu003] gi|306787601|ref|ZP_07425923.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu004] gi|306794365|ref|ZP_07432667.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu005] gi|306796335|ref|ZP_07434637.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu006] gi|306802195|ref|ZP_07438863.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu008] gi|306806402|ref|ZP_07443070.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu007] gi|306966602|ref|ZP_07479263.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu009] gi|306970795|ref|ZP_07483456.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu010] gi|307078518|ref|ZP_07487688.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu011] gi|307083082|ref|ZP_07492195.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu012] gi|313657386|ref|ZP_07814266.1| hypothetical protein MtubKV_03140 [Mycobacterium tuberculosis KZN V2475] gi|2222771|emb|CAB09951.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A [Mycobacterium tuberculosis H37Rv] gi|13880131|gb|AAK44840.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31617356|emb|CAD93464.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2A [Mycobacterium bovis AF2122/97] gi|121492152|emb|CAL70617.1| Conserved hypothetical integral membrane protein yrbE2A [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599986|gb|EAY58996.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis C] gi|134149059|gb|EBA41104.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis str. Haarlem] gi|148504508|gb|ABQ72317.1| conserved hypothetical integral membrane protein YrbE2a [Mycobacterium tuberculosis H37Ra] gi|148720316|gb|ABR04941.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis F11] gi|224772090|dbj|BAH24896.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253319024|gb|ACT23627.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis KZN 1435] gi|289414895|gb|EFD12135.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T46] gi|289419098|gb|EFD16299.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis CPHL_A] gi|289437472|gb|EFD19965.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 605] gi|289537618|gb|EFD42196.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis K85] gi|289542274|gb|EFD45922.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T17] gi|289684829|gb|EFD52317.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis 02_1987] gi|289689671|gb|EFD57100.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis T92] gi|289708212|gb|EFD72228.1| hypothetical integral membrane protein yrbE2A [Mycobacterium tuberculosis GM 1503] gi|289712230|gb|EFD76242.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298493868|gb|EFI29162.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216590|gb|EFO75989.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu001] gi|308325673|gb|EFP14524.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu002] gi|308331897|gb|EFP20748.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu003] gi|308335684|gb|EFP24535.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu004] gi|308337263|gb|EFP26114.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu005] gi|308343188|gb|EFP32039.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu006] gi|308347055|gb|EFP35906.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu007] gi|308350998|gb|EFP39849.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu008] gi|308355632|gb|EFP44483.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu009] gi|308359587|gb|EFP48438.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu010] gi|308363515|gb|EFP52366.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu011] gi|308367196|gb|EFP56047.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis SUMu012] gi|323720939|gb|EGB30004.1| hypothetical protein TMMG_03290 [Mycobacterium tuberculosis CDC1551A] gi|326902419|gb|EGE49352.1| hypothetical membrane protein yrbE2A [Mycobacterium tuberculosis W-148] gi|328457304|gb|AEB02727.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis KZN 4207] Length = 265 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 89/240 (37%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + + I Q +++ + + +S +I Sbjct: 18 AVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLN 77 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L++FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ + Sbjct: 78 ILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVL 137 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+D + L+ PR+ A I LL ++G + + + L Sbjct: 138 GIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGL 197 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++K+ G+V G +G V +V + + + + Sbjct: 198 PEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTI 257 >gi|41410180|ref|NP_963016.1| hypothetical protein MAP4082 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776985|ref|ZP_05218501.1| hypothetical protein MaviaA2_20271 [Mycobacterium avium subsp. avium ATCC 25291] gi|41399014|gb|AAS06632.1| hypothetical protein MAP_4082 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 265 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 91/236 (38%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + ++ I Q +++ + + ++ +I L+ Sbjct: 22 VGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAIPLTVLIIFTLNILLA 81 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ +G+D Sbjct: 82 EFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEVLGIDP 141 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A I LL ++G + I + L + Sbjct: 142 IHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITGLPEVV 201 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++K+ G+V G +G V +V + + ++ + Sbjct: 202 ISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTTI 257 >gi|41406856|ref|NP_959692.1| hypothetical protein MAP0758 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395206|gb|AAS03075.1| hypothetical protein MAP_0758 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 281 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 98/242 (40%), Gaps = 7/242 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173 V + A G + G A++ + + + G V +V Sbjct: 18 VALLAGIGDHALFYGKAL--AGMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGF 75 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ G +A QG L G E + L + + +R + ++ + +A G+ + A++G Sbjct: 76 LTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIVAPVVAGIGLAATFGAGVTAQLG 135 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEE+DA+ +M + V L+S RI A ++++ L +A + + + Sbjct: 136 AMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQS 195 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 ++ F++ ++ ++A MA I ++ G+ +G V S Sbjct: 196 QGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTS 255 Query: 354 IS 355 + Sbjct: 256 LI 257 >gi|254773836|ref|ZP_05215352.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 281 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 96/241 (39%), Gaps = 7/241 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILI 174 + A G + G A++ + + + G V +V + Sbjct: 19 ALLAGIGDHALFYGKAL--AGMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGFL 76 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + G +A QG L G E + L + + +R ++ + +A G+ + A++G+ Sbjct: 77 TLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGA 136 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+INEE+DA+ +M + V L+S RI A ++++ L +A + + + Sbjct: 137 MRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQSQ 196 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ F++ ++ ++A MA I ++ G+ +G V S+ Sbjct: 197 GLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTSL 256 Query: 355 S 355 Sbjct: 257 I 257 >gi|118466592|ref|YP_883684.1| hypothetical protein MAV_4553 [Mycobacterium avium 104] gi|118167879|gb|ABK68776.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 260 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 91/236 (38%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + ++ I Q +++ + + ++ +I L+ Sbjct: 17 VGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAIPLTVLIIFTLNILLA 76 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 +FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ +G+D Sbjct: 77 EFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEVLGIDP 136 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 + L+ PR+ A I LL ++G + I + L + Sbjct: 137 IHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITGLPEVV 196 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++K+ G+V G +G V +V + + ++ + Sbjct: 197 ISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFAVNVVLTTI 252 >gi|315442435|ref|YP_004075314.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315260738|gb|ADT97479.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 284 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 100/257 (38%), Gaps = 9/257 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY------YVGVSGVPVVILIS 175 + + + + L+ + VG V I++ Sbjct: 24 VARLGHMLVFFVRALVAIPLALRHY---RAEFVRLLSDIAWGNGSLVVGGGTAGVAIVLG 80 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GA++ +G L G + + S++ RE+ + ++ A ++G A++GSM Sbjct: 81 ITVGALVGIEGYNFLDLLGLGPATGIISSLVNTRELAPIALSLAFATQAGCRFTAQLGSM 140 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I EEIDA+ ++ + + L++ R+ A ++++ L ++ + + IV+ Sbjct: 141 RIAEEIDALDSIAIRPIPYLVTTRLMASVVAVVPLYVVCLAVSYLTTQIVVRAISGGATG 200 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + F + +I L+KA + GF +G + SI+ Sbjct: 201 SYMHYFTLMLSGQDILYSLLKAIIFVWIATTIQCYYGFYASGGPEGVGVAAGHAMRASIT 260 Query: 356 IVIIIDSLFAIFYFAIG 372 +VII++ L + + I Sbjct: 261 VVIIVNMLLTMALWNID 277 >gi|222055776|ref|YP_002538138.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] gi|221565065|gb|ACM21037.1| protein of unknown function DUF140 [Geobacter sp. FRC-32] Length = 257 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 4/258 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +GK I+K + + N + + L +Q+Y+ G+ + Sbjct: 1 MITALGKWILKLLLTGMGLVETIIQAFRNLFLSFKQGRRP--IMAVLRKQIYFTGLESLK 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V+++IS G VI Q + E + ++ + +RE+G +LTA++I RSG+AI Sbjct: 59 VIVIISVTIGIVIITQIISLVGA--NETLTGRVLVWVIIRELGPVLTAIIIIARSGTAIA 116 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 E+G MKIN EI++I ++G+ R LI PRI + S+ +LTI +AI+G IV Sbjct: 117 TELGYMKINNEIESIESLGIPADRYLIMPRIIGVTTSVVILTIYFEIAAILGGFIVAAIG 176 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 + +PF F S T+ + IK+ F + + G VG + + + T Sbjct: 177 WHVPFDKFAQSIFSILTIKELGMSFIKSLFFGLFLSAACCRHGLGVGKSATQIPQAATKG 236 Query: 350 VVQSISIVIIIDSLFAIF 367 V+QS+ +V ++D + + Sbjct: 237 VMQSLFLVFVLDGVITLI 254 >gi|215429420|ref|ZP_03427339.1| integral membrane protein YrbE2a [Mycobacterium tuberculosis EAS054] gi|289752626|ref|ZP_06512004.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693213|gb|EFD60642.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 265 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 89/240 (37%) Query: 128 QAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +G + + I Q +++ + + +S +I Sbjct: 18 AVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLN 77 Query: 188 FQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTM 247 L++FGA S ++ + ++G L T ++IAG +AI A++G+ I EEIDA+ + Sbjct: 78 ILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVL 137 Query: 248 GLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATL 307 G+D + L+ PR+ A I LL ++G + + + L Sbjct: 138 GIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGL 197 Query: 308 ANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++K+ G+V G +G V +V + + + + Sbjct: 198 PEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLVLCVIALFATNVVLTTI 257 >gi|15828391|ref|NP_302654.1| hypothetical protein ML2587 [Mycobacterium leprae TN] gi|221230868|ref|YP_002504284.1| hypothetical protein MLBr_02587 [Mycobacterium leprae Br4923] gi|13093821|emb|CAC32119.1| conserved membrane protein [Mycobacterium leprae] gi|219933975|emb|CAR72687.1| conserved membrane protein [Mycobacterium leprae Br4923] Length = 267 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 97/239 (40%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 ++G + ++ I Q +++ +++S ++ Sbjct: 21 LVLVGGFFRMLVLTGKALFRRPFQWREFILQCWFIMRVAFLPTVMVSIPLTVLLIFTLNV 80 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+QF A S +I + ++G L T +++AG ++I A++G+ I EEIDA+ +G Sbjct: 81 LLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADLGARTIREEIDAMEVLG 140 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A + LL L ++G + ++ + + + L Sbjct: 141 IDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLP 200 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+V G V SN LG V VV + + ++ + Sbjct: 201 EVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVLCVVALYAVNVVLTTI 259 >gi|118470997|ref|YP_890127.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155] gi|118172284|gb|ABK73180.1| TrnB2 protein [Mycobacterium smegmatis str. MC2 155] Length = 287 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 11/258 (4%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV------- 168 + + K ++ QA G + +++ + L+ +M +G + Sbjct: 21 RGVPKTVDTVGEQALFYGETMRYLPNAFT---RYRKETIRLVAEM-TMGAGALVMIGGTV 76 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 V ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 77 GVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGA 136 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G+M++ EEIDA+ +M + V L+S R+ A +I++ L L+ +A A Sbjct: 137 TAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLLAGLIAIVPLYSLSVLAAFFAARFTTVF 196 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 ++ F++ +++ ++A MA A+ +V G+ +G V Sbjct: 197 INGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGPVGVGIAVGQ 256 Query: 349 CVVQSISIVIIIDSLFAI 366 V S+ +V+ I ++ Sbjct: 257 AVRTSLIVVVTITLFISL 274 >gi|118466445|ref|YP_880208.1| TrnB2 protein [Mycobacterium avium 104] gi|118167732|gb|ABK68629.1| TrnB2 protein [Mycobacterium avium 104] Length = 281 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 97/242 (40%), Gaps = 7/242 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173 V + A G + G A++ + + + G V +V Sbjct: 18 VALLAGIGDHALFYGKAL--AGMPFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGF 75 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ G +A QG L G E + L + + +R ++ + +A G+ + A++G Sbjct: 76 LTLAAGGTLAIQGYTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLG 135 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEE+DA+ +M + V L+S RI A ++++ L +A + + + Sbjct: 136 AMRINEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTFLLGQS 195 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 ++ F++ ++ ++A MA I ++ G+ +G V S Sbjct: 196 QGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGGPAGVGNATGNAVRTS 255 Query: 354 IS 355 + Sbjct: 256 LI 257 >gi|240170399|ref|ZP_04749058.1| hypothetical protein MkanA1_13895 [Mycobacterium kansasii ATCC 12478] Length = 247 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + ++ + Q ++V + +L++ +++ Sbjct: 1 MQAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVSMAPTLLVAIPFTVLVSFTLNI 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 61 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIDAMEVLG 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G + D+ F + + Sbjct: 121 INPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYVFSVFVQDVNPGAFAAGITLLTGVP 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G V G + ++G V VV + + +++ + Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTVSGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240 >gi|120405354|ref|YP_955183.1| hypothetical protein Mvan_4401 [Mycobacterium vanbaalenii PYR-1] gi|119958172|gb|ABM15177.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 250 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 109/243 (44%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 LG + + + + + +RQ ++V + +L++ ++ Sbjct: 2 LTRSLQGLGGLFAMSVDTMVLLSRRPFAWQEFLRQSWFVARVSLLPTLLLAIPFSVLLVF 61 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 L++FGA FS + + +IG ++T +++AG +A+ A++G+ I +EIDA+ Sbjct: 62 TFNILLTEFGAADFSGTGAAYGAVTQIGPIVTVLVVAGAGATAMCADLGARTIRDEIDAM 121 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 R MG++ ++ L+ PR+ A +L+ +++G+ + ++ F + Sbjct: 122 RVMGINPLQALVLPRVLAASFVAVMLSSAVILVSLVGSYVFGVFIQNVTPGAFAAGMTLL 181 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 + ++ LIKA G++A +G +VG +G V VV + + I+ + Sbjct: 182 TGVGDVVVALIKAAMFGLCAGLIACYKGLSVGGGPAGVGLAVNETVVFTFMALFGINIVT 241 Query: 365 AIF 367 + Sbjct: 242 SAV 244 >gi|111021668|ref|YP_704640.1| hypothetical protein RHA1_ro04696 [Rhodococcus jostii RHA1] gi|110821198|gb|ABG96482.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 254 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 101/239 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + +GE + + + Q ++V + +L++ +++ Sbjct: 9 LRAVGGFFTMSGETLRAVFSRPFQRREFVDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA+R +G Sbjct: 69 LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMRVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A + LL L I+G + D+ F + Sbjct: 129 INPIHRLVVPRVLASTVVALLLNGLVCTIGILGGFVFSVYIQDVNPGAFVNGITLLTGFG 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G V + S+G V VV S + +++ L Sbjct: 189 ELVISEVKAGLFGMIAGLVAAYLGLNVRGGAKSVGDAVNQTVVFSFMALFVVNVLVTAV 247 >gi|284043171|ref|YP_003393511.1| hypothetical protein Cwoe_1709 [Conexibacter woesei DSM 14684] gi|283947392|gb|ADB50136.1| protein of unknown function DUF140 [Conexibacter woesei DSM 14684] Length = 264 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 3/246 (1%) Query: 126 CSQAHILGLVISNTGEFCA--SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 G ++ T + F +RQ + +S V+ + F+ G Sbjct: 8 RGWVESFGDIVRFTMRMFGEVYGGRVFRFFGEALRQAGLLILSSTLVIWGLVFIIGLQCG 67 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 +GA+ G ++ + LRE+ M+A + G+ IVAEIGSM+I EEIDA Sbjct: 68 IEGAYFTRGTGTPNYAGVFTAWCDLRELVPYAFGYMMAAKVGTGIVAEIGSMRITEEIDA 127 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY-YDIPFAVFFSRFH 302 + MG+ + L R+ A + LP + I +A I + + + +++ + F Sbjct: 128 LEVMGISSMTFLCGTRLLASWMVLPFVYIGGVGAAFIASYLAVVVQIHEVSAGGYELIFW 187 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + ++ L+K FMA I +V G+ +G +V ++ V +I Sbjct: 188 AFQNPTDLLYSLLKGAFMATGIVVVGCYYGYNASGGPVGVGTATAKSMVVNLVYVHLIGM 247 Query: 363 LFAIFY 368 + + Sbjct: 248 MGTQLF 253 >gi|120401386|ref|YP_951215.1| hypothetical protein Mvan_0361 [Mycobacterium vanbaalenii PYR-1] gi|119954204|gb|ABM11209.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 256 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 106/239 (44%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + + + Q ++V V ++++ ++ Sbjct: 11 LRGVGGFFAMSIDTFVAMVRPPFAFREYVLQSWFVARVSVLPALMLTLPYSVLLVFTFNI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA F+ +I + +IG ++T ++++G +A+ A++G+ I EE+DA++ MG Sbjct: 71 LLKEFGAADFAGTGAAIGTVSQIGPIVTVLVVSGAGATAMCADLGARTIREELDAMKVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ ++ L+ PR+ A L+ + + GA ++ F S A Sbjct: 131 INPIQALVVPRVLAATTVALALSATVIIAGLAGAFFFCVFVQNVSAGAFISGMTLLTGAA 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++F L KA A G++A +G +VG +G V VV + ++ I+ + Sbjct: 191 DVFVSLAKATLFGLAAGLIACYKGISVGGGPAGVGNAVNETVVFTFMVLFAINVIATAV 249 >gi|183980209|ref|YP_001848500.1| integral membrane protein YrbE6A [Mycobacterium marinum M] gi|183173535|gb|ACC38645.1| conserved hypothetical integral membrane protein YrbE6A [Mycobacterium marinum M] Length = 281 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 ++ + IRQ ++ + + IL++ GA ++ Q A Q GA Sbjct: 40 VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ A+++A GSAI A++G + EE DA+ MG+ VR L Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEVMGVSVVRNL 159 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A ++ L + F + + + F + F + AT ++ L+ Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +VA ++G + + V VV+++ +++I++ + + Y + Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275 >gi|118619947|ref|YP_908279.1| integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99] gi|118572057|gb|ABL06808.1| conserved hypothetical integral membrane protein YrbE6A [Mycobacterium ulcerans Agy99] Length = 281 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 105/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 ++ + IRQ ++ + + IL++ GA ++ Q A Q GA Sbjct: 40 VAALRYLAIDLVTGRFPWTECIRQASFMAATAIMPTILVALPIGATLSIQFAMLAGQVGA 99 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ A+++A GSAI A++G + EE DA+ MG+ VR L Sbjct: 100 TSLAGAASGLTVVRQAASLVAAILLAAAVGSAITADLGVRTMREETDAMEMMGVSVVRNL 159 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A ++ L + F + + + F + F + AT ++ L+ Sbjct: 160 VVPRLLAAMVIGVALCGVVCFVGFLASYLFNVYVQGGSAGSFLATFSAFATTGDMILALL 219 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + +VA ++G + + V VV+++ +++I++ + + Y + Sbjct: 220 KAAVYGFIVTVVACQKGLSTRGGPAGVANSVNAAVVEAVLLLMIVNVVVSELYTVL 275 >gi|126437565|ref|YP_001073256.1| hypothetical protein Mjls_5001 [Mycobacterium sp. JLS] gi|126237365|gb|ABO00766.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 280 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 7/261 (2%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV----- 165 + + + ++ QA G I K + + G Sbjct: 9 LRRVFRWVPGAVDTVGEQALFYGETIRYIPNALTRYR--KETIRLIAEMTMGAGALVMIG 66 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G Sbjct: 67 GTVGVAAFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIG 126 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M++ EEIDA+ TM + V L+S R+ A +I++ L L+ +A A Sbjct: 127 AGTTAQLGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARFT 186 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ F++ +++ ++A M+ A+ +V G+ +G Sbjct: 187 TVFINGQSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIA 246 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ +V+ I ++ Sbjct: 247 VGQAVRTSLIVVVTITLFISL 267 >gi|296394454|ref|YP_003659338.1| hypothetical protein Srot_2051 [Segniliparus rotundus DSM 44985] gi|296181601|gb|ADG98507.1| protein of unknown function DUF140 [Segniliparus rotundus DSM 44985] Length = 280 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 4/256 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCAS----SYKFKGFLLSLIRQMYYVGVSGVPVV 171 + + + + LG + S + L IRQ +++ Sbjct: 15 RFVSYLFDTVLTSLRTLGRWFMLAADAFRYLVVDSVMLRYPLRETIRQCWFITSVTALPS 74 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +L+S G ++ Q Q GA + + +R+ ++ A+++ G +GSAI A+ Sbjct: 75 LLVSIPFGVIVMVQVGNITQQVGAASLTGAAGGLAVIRQGAPIVAALLLGGAAGSAIAAD 134 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+ I EEIDA+R +G++ + L++PR+ A+++ PLL + F + I+ Y D Sbjct: 135 LGARTIREEIDAMRVIGINPTQRLVAPRLAAMLLVAPLLCLFIVFITMAAGYILAVMYQD 194 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + + A L++++ + KA F + ++A + G + + V VV Sbjct: 195 VTPGSYLGSLGAFAKLSDVYVAVGKALFFGVVVVVIACQRGLETKFGPRGVAESVNAAVV 254 Query: 352 QSISIVIIIDSLFAIF 367 + +++ + Sbjct: 255 LGVLSTFVLNVVATQI 270 >gi|296169578|ref|ZP_06851198.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895844|gb|EFG75539.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 98/240 (40%), Gaps = 10/240 (4%) Query: 126 CSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG---------VPVVILIS 175 +G G+ A + + + +IR + + + + +V ++ Sbjct: 24 VGTLGRIGDHTLFYGKALAGVPFAVRHYRREVIRLIAEISMGAGTLAMIGGTLVIVGFLT 83 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G +A QG L G E + L + + +R ++ + +A G+ + A++G+M Sbjct: 84 LAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLGAM 143 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +INEEIDA+ +M + + L+S RI A ++++ L +A + + + + Sbjct: 144 RINEEIDALESMAIRPISYLVSTRIAAGMMAITPLYSIAVILSFLASQFTTVVLFGQSGG 203 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 ++ F + ++ ++A MA I ++ G+ +G V S+ Sbjct: 204 LYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTSLI 263 >gi|319948072|ref|ZP_08022243.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4] gi|319438260|gb|EFV93209.1| hypothetical protein ES5_02019 [Dietzia cinnamea P4] Length = 254 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 98/236 (41%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + T + S I Q +++ +L++ +++ L Sbjct: 12 IGEFFAMTLDTFVSFPSIVRQGREFIEQSWFIARVSTMATVLVAIPFTVLVSFTLNILLR 71 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S ++ + ++G ++T +++AG +AI A++G+ I EEIDA+ +G+D Sbjct: 72 EIGAADLSGAGAALGAVTQVGPMVTVLIVAGAGATAICADLGARTIREEIDAMEVLGIDP 131 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L+ PR+ A LL L I+G + + F + L + Sbjct: 132 VKRLVVPRVAASTFVALLLNGLVCTIGILGGFLFSVLLQGVNPGAFVNGITLLTGLGELI 191 Query: 312 TGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 IKA G+VA +G V +G V VV + + +++++ Sbjct: 192 LAQIKAGVFGMLAGLVACYKGLYVRGGPKEVGSAVNETVVFAFMCLFVVNTVITAV 247 >gi|120401387|ref|YP_951216.1| hypothetical protein Mvan_0362 [Mycobacterium vanbaalenii PYR-1] gi|119954205|gb|ABM11210.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 9/259 (3%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YY 162 + Y ++ N+ QA + + ++ G LL LI QM Sbjct: 6 PSRPHPRWYRAAHEVAAGWNELGDQARFYAGTLRAVPDAVR---RYPGELLRLIAQMGLG 62 Query: 163 VGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 G V +V ++ TGA++A QG Q + G E + + +R I TA Sbjct: 63 TGALAVVGGTVAIVGFLTITTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIVPGTTA 122 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V ++ G+ A++G+M+INEEIDA+ +G+ V L + R+ A ++ + L +A Sbjct: 123 VALSATIGAGATAQLGAMRINEEIDALEVIGIRSVTYLAATRVLAGVVVVIPLYCIAVMM 182 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A + A Y V+ F++ ++ +++ + + +V G+ Sbjct: 183 AFLAARTGTTVIYGQGSGVYDHYFNTFLNPTDLVWSFLQSVAITVVVMLVHTYYGYTARG 242 Query: 338 HSNSLGKKVTTCVVQSISI 356 +G+ V V S+ + Sbjct: 243 GPAGVGEAVGRAVRTSMVV 261 >gi|296166534|ref|ZP_06848965.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898146|gb|EFG77721.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 280 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 7/250 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176 ++D QA G + + K + + G V V ++ Sbjct: 20 VDDFGEQALFYGQTVRHVPHAITKYR--KETIRLIAEMTMGAGALVMIGGTVGVAAFLTL 77 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +G VIA QG L G E + L + L +R + ++ + +A G+ A++G+M+ Sbjct: 78 ASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++EEIDA+ M ++ V L+S R+ A +I++ L L+ +A A + Sbjct: 138 VSEEIDAVECMAVESVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTVYINGQSKGL 197 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + F++ +++ ++A M+ A+ +V G+ +G V V S+ + Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSLIV 257 Query: 357 VIIIDSLFAI 366 V++I ++ Sbjct: 258 VVVITLFISL 267 >gi|206602875|gb|EDZ39356.1| Probable ABC transporter, permease protein [Leptospirillum sp. Group II '5-way CG'] Length = 261 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 116/255 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 V F + ++++ +F + L + Q+ + G+ +P++ ++SF Sbjct: 6 SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G + +L + G + ++ + LR +G TA+++ R+ S++ EIG+M+ Sbjct: 66 LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+ E+D I MG + L++PR++ I+S L++ A +G ++ + +P Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFLGGLLIAFFGLSMPIVS 185 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ L+++ L+++ I V G VG + ++ T +V SI + Sbjct: 186 LIRALETSINLSDLLIPLVESITYGSIIAAVGSYHGLKVGDSPADVPQQTTRALVSSIVL 245 Query: 357 VIIIDSLFAIFYFAI 371 + + F +F + Sbjct: 246 CTLFSTFFLVFSSVL 260 >gi|120405106|ref|YP_954935.1| hypothetical protein Mvan_4152 [Mycobacterium vanbaalenii PYR-1] gi|119957924|gb|ABM14929.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 269 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 1/250 (0%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVT 178 + N +G S + + + Q ++V + +L++ Sbjct: 13 IALPNGLSGAMAAVGGFFSMALDAVRFVFVRPFQWREFLEQCWFVARVSMAPTLLVAIPF 72 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 +++ L + GA S + + ++G L+T +++AG +A+ A++GS I Sbjct: 73 TVLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIR 132 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +G++ V+ L++PR+ A + LL L I+G D+ F Sbjct: 133 EEIDAMEVLGINPVQRLVTPRMLAAGLVALLLNSLVVIIGILGGYFFSVFVQDVNPGAFA 192 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIV 357 + + + +KA G+VA G G + ++G V VV + + Sbjct: 193 AGITLLTGVPEVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMAL 252 Query: 358 IIIDSLFAIF 367 +I+ + Sbjct: 253 FVINVVVTAI 262 >gi|312137896|ref|YP_004005232.1| integral membrane protein yrbe1b [Rhodococcus equi 103S] gi|325673337|ref|ZP_08153029.1| ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|311887235|emb|CBH46544.1| putative integral membrane protein YrbE1B [Rhodococcus equi 103S] gi|325555927|gb|EGD25597.1| ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 285 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 102/258 (39%), Gaps = 3/258 (1%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKF---KGFLLSLIRQMYYVGVSGVPVVIL 173 +V + D + + K + +S G + +V Sbjct: 19 AVVDGLADVGRHVTFFFRTLVSLPYAATRYRKHVLAQISEVSFGTNSVLSGGGTIGIVFA 78 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S ++ + L G S L +I RE+ ++ A+ +A + G+ A++G Sbjct: 79 MSLAAAMMLGVETQRGLELVGMTTLSGMLSAIANTRELAPVVVAIALAAKVGTGFTAQLG 138 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+I++EIDA+ +MG+ + L R+ A ++ + + ++ ++ + +VI + Sbjct: 139 AMRISDEIDALDSMGVRSIPFLAGTRVLAAMVCVLPIFMIGLLASYLSTRLVIVVWGGAS 198 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + FH + ++ IKA A + +V G+ +G+ + + Sbjct: 199 AGTYDYFFHLALSPVDLVYAAIKAIVFAGVVALVHCSYGYFASGGPAGVGQAAGRALRTA 258 Query: 354 ISIVIIIDSLFAIFYFAI 371 I + ++D L + + Sbjct: 259 ILAIGVLDVLMTFALWGL 276 >gi|124514232|gb|EAY55746.1| probable ABC transporter, permease protein [Leptospirillum rubarum] Length = 261 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 115/255 (45%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 V F + ++++ +F + L + Q+ + G+ +P++ ++SF Sbjct: 6 SAVNFFKIFFYLRDLAQIILTGLYDFFLVLLTRRNALPLFLNQILFNGLDALPILTVVSF 65 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 + G + +L + G + ++ + LR +G TA+++ R+ S++ EIG+M+ Sbjct: 66 LVGMGTVAEAGIELPKLGVQNLVGPIILHIILRIVGPFTTALIVTARTASSLTVEIGNMR 125 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+ E+D I MG + L++PR++ I+S L++ A IG ++ + +P Sbjct: 126 ISGELDTIEMMGANISYFLLAPRLFGAIVSTVALSLYFAVIAFIGGLLIAFFGLSMPIVS 185 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 ++ L ++ L+++ I V G VG + ++ T +V SI + Sbjct: 186 LIRALETSINLPDLLIPLVESITYGSIIAAVGSYHGLKVGDSPTDVPQQTTRALVSSIVL 245 Query: 357 VIIIDSLFAIFYFAI 371 + + F +F + Sbjct: 246 CTLFSTFFLVFSSVL 260 >gi|118618294|ref|YP_906626.1| integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] gi|118570404|gb|ABL05155.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium ulcerans Agy99] Length = 277 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 96/221 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + T + S ++ + Q ++V +L++ + Sbjct: 32 VRALGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNV 91 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ GA FS +I + + ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 92 LLTDIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 151 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ ++ L+ PR+ P L+ L + +IGA + + + + + Sbjct: 152 INPIQALVVPRVLGATTVSPALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTV 211 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ +IKA G++A +G +VG +G+ V Sbjct: 212 DVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNET 252 >gi|118469369|ref|YP_889051.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170656|gb|ABK71552.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 282 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 96/234 (41%), Gaps = 1/234 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + + + + + + +G V +V ++ TG Sbjct: 24 RVGDHTLFYLRAIAGTPHAALHYRKELVRLIAEISMGAGTLAMIG-GTVVIVGFLTLATG 82 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+A QG L G E + L + + +R ++ + +A G+ + A++G+M+INE Sbjct: 83 GVLAIQGYSSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMRINE 142 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +M + V L+S RI A +I++ L +A + + + ++ Sbjct: 143 EIDALESMAIRPVEYLVSTRIVAGMIAITPLYAIAVILSFLASQFTTVVLLGQSGGLYNH 202 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 F + ++ ++A MA I ++ G+ + +G V V S Sbjct: 203 YFDTFLNPIDLLWSFLQAILMAITILLIHTYFGYFASGGPSGVGVAVGNAVRTS 256 >gi|118619126|ref|YP_907458.1| integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99] gi|183984021|ref|YP_001852312.1| integral membrane protein YrbE3B_1 [Mycobacterium marinum M] gi|118571236|gb|ABL05987.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium ulcerans Agy99] gi|183177347|gb|ACC42457.1| conserved hypothetical integral membrane protein YrbE3B_1 [Mycobacterium marinum M] Length = 284 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 9/244 (3%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVI 172 V N +Q G + + + L+ LI QM V V +V Sbjct: 21 VAGWNQIGTQTKFFGRTLRSIHYMLIHY---RVELIRLIAQMGLGAGALMVIGGTVAIVG 77 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ TGA++A QG S+ G E + + +R I TA+ ++ G+ A++ Sbjct: 78 FLTVTTGALVAVQGYSDFSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQL 137 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+M+IN+EIDA+ MG+ + L + R+ A ++ + L + ++ A Y Sbjct: 138 GAMRINDEIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLYSQ 197 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 V+ F + ++ ++ ++ I +V G+ +G+ V V Sbjct: 198 ATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPAGVGEAVGRAVRT 257 Query: 353 SISI 356 S+ Sbjct: 258 SLIF 261 >gi|120402601|ref|YP_952430.1| hypothetical protein Mvan_1595 [Mycobacterium vanbaalenii PYR-1] gi|119955419|gb|ABM12424.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 107/260 (41%), Gaps = 10/260 (3%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167 ++ + + I G G+ AS + + R + + Sbjct: 8 RLRRAFRHTPRLVDIFGEQALFYGQSLASLPLAVRLYRRETARLIAEMAFGAGGLLVIGG 67 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + V + ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 68 TLGVTVFLTLASGGVIAVQGYASLGDIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGA 127 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A++G+M+I EEIDA+ M + + L++ R+ A +I + L LA ++ A Sbjct: 128 GSTAQLGAMRIAEEIDALEVMAVRSMAYLVATRMIAGVIVIVPLYSLAILTSFFSARFTT 187 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 ++ F++ ++ ++A M+ A+ +V G+ +G Sbjct: 188 VYLSGQSRGLYDHYFNTFLIPTDLLWSFLQAIAMSIAVMLVHTYYGYNAKGGPVGVGVAT 247 Query: 347 TTCVVQSISIVIIIDSLFAI 366 V S+ +V++I L ++ Sbjct: 248 GDAVRTSLIVVVVITLLISL 267 >gi|118463834|ref|YP_879936.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|254773612|ref|ZP_05215128.1| ABC-transporter integral membrane protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165121|gb|ABK66018.1| ABC-transporter integral membrane protein [Mycobacterium avium 104] Length = 280 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 7/250 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176 ++D QA G + K + + G V V ++ Sbjct: 20 VDDFGEQALFYGQTMRYVPNALTRYR--KETIRLIAEMTMGAGALVMIGGTVGVAAFLTL 77 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +G VIA QG L G E + L + L +R + ++ + +A G+ A++G+M+ Sbjct: 78 ASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++EEIDA+ M + V L+S R+ A +I++ L L+ +A A + Sbjct: 138 VSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYINGQSKGL 197 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + F++ +++ ++A M+ A+ +V G+ +G V V S+ + Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQAVRTSLIV 257 Query: 357 VIIIDSLFAI 366 V++I ++ Sbjct: 258 VVVITLFISL 267 >gi|41406661|ref|NP_959497.1| hypothetical protein MAP0563 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395010|gb|AAS02880.1| hypothetical protein MAP_0563 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 280 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 7/250 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176 ++D QA G + K + + G V V ++ Sbjct: 20 VDDFGEQALFYGQTMRYVPNALTRYR--KETIRLIAEMTMGAGALVMIGGTVGVAAFLTL 77 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +G VIA QG L G E + L + L +R + ++ + +A G+ A++G+M+ Sbjct: 78 ASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++EEIDA+ M + V L+S R+ A +I++ L L+ +A A + Sbjct: 138 VSEEIDAVECMAVHSVSYLVSTRLIAGLIAIVPLYSLSVLAAFFAARFTTVYINGQSKGL 197 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + F++ +++ ++A M+ A+ +V G+ +G V V S+ + Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNAHGGPVGVGIAVGQAVRTSLIV 257 Query: 357 VIIIDSLFAI 366 V++I ++ Sbjct: 258 VVVITLFISL 267 >gi|119867594|ref|YP_937546.1| hypothetical protein Mkms_1546 [Mycobacterium sp. KMS] gi|119693683|gb|ABL90756.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 284 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV------- 168 +++ +++ G +K L L+ QM +GV + Sbjct: 15 RRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLGVGALAVVGGTV 73 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V ++ TGA++A QG Q + G E + + +R IG ++ + +A G+ Sbjct: 74 VIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGA 133 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G+M+INEEIDA+ MG+ V L S R+ A +I + L +A SA A Sbjct: 134 TAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIA 193 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 Y V+ F + +I +A MA I +V GF +G+ V Sbjct: 194 IYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGR 253 Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373 V S+ ++ + + ++ I Sbjct: 254 AVRTSLIA-----AVLVVLFLSLAI 273 >gi|226304447|ref|YP_002764405.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494370|ref|ZP_04388133.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226183562|dbj|BAH31666.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318732|gb|EEN84590.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 254 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 99/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + I Q ++V + +L++ +++ Sbjct: 9 LRAVGGFFQMSAQTLRAVFSRPFQRQEFIDQAWFVARVSMVPTVLVAIPFTVLVSFTINI 68 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++ + I EEIDA++ +G Sbjct: 69 LLREIGAADLSGAGAALGTVTQVGPIVTVLIVAGAGATAICADLSARTIREEIDAMKVLG 128 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A LL L I+G + D+ F + Sbjct: 129 INPIHRLVVPRVLASTGVALLLNGLVCTIGILGGFVFSVFIQDVNPGAFVNGITLLTGFG 188 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+VA G V + S+G V VV + + +++ L Sbjct: 189 ELMLSMVKAGLFGMIAGLVAAYLGLNVKGGAKSVGDAVNQTVVFAFMALFVVNVLITTI 247 >gi|118465348|ref|YP_881277.1| TrnB2 protein [Mycobacterium avium 104] gi|118166635|gb|ABK67532.1| TrnB2 protein [Mycobacterium avium 104] Length = 282 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV- 168 +G ++V+ Q G ++ + ++ G LL LI +M G V Sbjct: 11 FAALGPRLVESTRKLGEQTVFYGQSLTAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67 Query: 169 ----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 ++ ++ TGA++A QG LS G E + L + L +R I + +A Sbjct: 68 GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+INEEIDA+ MG+ V L S RI A I+ + L +A + I A + Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + Y V+ F + ++ A MA + +V GF +G+ Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V S+ + + + ++ Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269 >gi|254774785|ref|ZP_05216301.1| TrnB2 protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 282 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV- 168 +G ++V+ Q G ++ + ++ G LL LI +M G V Sbjct: 11 FAALGPRLVESTRKLGEQTVFYGQSLAAIADAIR---RYPGELLRLIAEMGMGTGALAVI 67 Query: 169 ----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 ++ ++ TGA++A QG LS G E + L + L +R I + +A Sbjct: 68 GGTVGIIGFLTLTTGALVAVQGYDTLSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATI 127 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 G+ A++G+M+INEEIDA+ MG+ V L S RI A I+ + L +A + I A + Sbjct: 128 GAGATAQLGAMRINEEIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKL 187 Query: 285 VIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + Y V+ F + ++ A MA + +V GF +G+ Sbjct: 188 LTIYVYGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPAGVGE 247 Query: 345 KVTTCVVQSISIVIIIDSLFAI 366 V V S+ + + + ++ Sbjct: 248 AVGRSVRSSMIVTAFVCLMISL 269 >gi|311741975|ref|ZP_07715785.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] gi|311314468|gb|EFQ84375.1| ABC superfamily ATP binding cassette transporter membrane protein [Aeromicrobium marinum DSM 15272] Length = 283 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 96/256 (37%), Gaps = 1/256 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + A + + ++ + + M +G V VV +S Sbjct: 22 RSVGDLGTQLMFYARAIAWIPLTIRKYPKEIRRLIAEVSMGSGAMAAIG-GTVFVVFFLS 80 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G + + G S + RE ++ + + G+ A++G+M Sbjct: 81 LAIGIQVGLEAFTTFGNIGVGALSGFFSAYFNTREAAPIMACIALTATVGAGFTAQLGAM 140 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +++EEIDA+ M + + L++ RI A ++++ L + + + +++ + Sbjct: 141 RVSEEIDALDVMAVPSIPYLVTTRIVAGMVAVVPLFAIGLITMFLATQVMVTVAFGQATG 200 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + F + ++ +K A I V G+ +G+ V V S+ Sbjct: 201 TYQHYFDTFLVPGDVALAGVKVLLTAVVIMCVCCYYGYTASGGPAGVGRSVGRAVRTSLI 260 Query: 356 IVIIIDSLFAIFYFAI 371 V+ ID +F I ++ + Sbjct: 261 TVMSIDLVFGIAFWGV 276 >gi|108801581|ref|YP_641778.1| hypothetical protein Mmcs_4618 [Mycobacterium sp. MCS] gi|119870735|ref|YP_940687.1| hypothetical protein Mkms_4706 [Mycobacterium sp. KMS] gi|108772000|gb|ABG10722.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119696824|gb|ABL93897.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 280 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 7/255 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVV 171 + ++ QA G I K + + G V V Sbjct: 15 WVPGAVDTMGEQALFYGETIRYIPNAVTRYR--KETIRLIAEMTMGAGALVMIGGTVGVA 72 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ +G VIA QG L G E + L + L +R + ++ + +A G+ A+ Sbjct: 73 AFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGTTAQ 132 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M++ EEIDA+ TM + V L+S R+ A +I++ L L+ +A A Sbjct: 133 LGAMRVAEEIDAVETMAVHSVSYLVSTRLMAGLIAIVPLYSLSVLAAFFAARFTTVYING 192 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 ++ F++ +++ ++A M+ A+ +V G+ +G V V Sbjct: 193 QSAGLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVR 252 Query: 352 QSISIVIIIDSLFAI 366 S+ +V+ I ++ Sbjct: 253 TSLIVVVTITLFISL 267 >gi|169628784|ref|YP_001702433.1| putative YrbE family protein [Mycobacterium abscessus ATCC 19977] gi|169240751|emb|CAM61779.1| Putative YrbE family protein [Mycobacterium abscessus] Length = 272 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 107/261 (40%), Gaps = 6/261 (2%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVV 171 + H++ + + +++ L L+ + VG VV Sbjct: 5 VDTAARPLARFGHMVTFFVHAFLAIPIALRRYRREFLRLLSDITWGNGSIVVGGGTAGVV 64 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +++ GA++A +G L G + + S++ RE+ ++ A+ A ++G + Sbjct: 65 LVLGVTAGALVAIEGYNFLELMGLGPATGVISSLVTTRELAPIMAALAFAVQAGCRFTTQ 124 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +GSM+I EE+DA+ ++ + + L++ R+ A ++++ L + + + I++ Sbjct: 125 LGSMRIAEEVDAMDSLAIRPIPYLVTTRLLASVVAIIPLYVACLTISYLSCQIMVGIVSG 184 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + F A+ +I + KA V GF +G + Sbjct: 185 GSMGPYLHYFTLLASGTDIAYSVGKAIIFVWIASAVQCYYGFCADGGPEGVGIAAGHAMR 244 Query: 352 QSISIVIIIDSLFAIFYFAIG 372 SI+ VII++ L + +++ Sbjct: 245 ASITAVIIVNMLLTMALWSVD 265 >gi|254819936|ref|ZP_05224937.1| TrnB1 protein [Mycobacterium intracellulare ATCC 13950] Length = 262 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 101/236 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + T + + I Q ++V + IL+S A+ Sbjct: 18 LREVGSYFALTLDIFTQLVRPPFAWREFIHQAWFVARVSIAPTILLSIPFNALSVFIINV 77 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + IG + T +++AG +AI A++G+ I EE+DA+R MG Sbjct: 78 LLVEIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMG 137 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PR+ AL ++ LL + ++G+ + + + + +A Sbjct: 138 INPVQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIA 197 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ KA G +A +G VG +G V VV + + +I+ + Sbjct: 198 DVAIAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 253 >gi|120403833|ref|YP_953662.1| hypothetical protein Mvan_2849 [Mycobacterium vanbaalenii PYR-1] gi|119956651|gb|ABM13656.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 270 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 104/249 (41%), Gaps = 1/249 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + +G ++S + + ++ + Q ++V + +L++ Sbjct: 15 ALGAGMAAPMQGVGGLLSMSADAVKFLFRRPFQGREFLEQSWFVARVSLMPTLLVAIPFT 74 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +++ L + GA S + + ++G ++T +++AG +A+ A++GS I E Sbjct: 75 VLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRE 134 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +G++ V+ L++PR+ A + LL L I+G + F + Sbjct: 135 EIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGILGGYFFSIFIQGVNPGAFAA 194 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVI 358 + + +KA G+VA G + G + ++G V VV + + Sbjct: 195 GITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISGGGAKAVGNAVNETVVYAFMALF 254 Query: 359 IIDSLFAIF 367 +++ + Sbjct: 255 VVNVVVTAI 263 >gi|120405105|ref|YP_954934.1| hypothetical protein Mvan_4151 [Mycobacterium vanbaalenii PYR-1] gi|119957923|gb|ABM14928.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 285 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 4/252 (1%) Query: 103 FYNSFKNLHYHIGKKIV---KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 F L H+G+ + + + +G V F + + Sbjct: 7 LRQRFPRLVDHLGRPVALLSRLGDHVLFYGRAIGGVPHAAVHFRKEIVRLIAEISMGAGT 66 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 + +G V +V ++ G +A QG L G E + L + + +R ++ + Sbjct: 67 LAMIG-GTVVIVGFLTLAAGGTLAIQGYSSLGNIGIEALTGFLAAFINVRIAAPVVAGIG 125 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 +A G+ + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A + Sbjct: 126 LAATFGAGVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSIAVILSF 185 Query: 280 IGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHS 339 + + + ++ F + ++ ++A MA AI +V G+ Sbjct: 186 VASQFTTVVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGP 245 Query: 340 NSLGKKVTTCVV 351 + +G V V Sbjct: 246 SGVGAAVGNAVR 257 >gi|226306858|ref|YP_002766818.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|226185975|dbj|BAH34079.1| putative YrbE family protein [Rhodococcus erythropolis PR4] Length = 257 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 98/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + ++ + + + Q + + + +L++ +++ Sbjct: 12 MRELGQFYRMGADVAVGLFRTRFQVQEFLEQSWMIARVSIVPTVLVAVPFTVLVSFTLNI 71 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++GS I EEIDA+ +G Sbjct: 72 LLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAMEVLG 131 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A + LL L I G + F L Sbjct: 132 IDPINRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLLTGLP 191 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+VA G +V +G+ V VV + + +++++ Sbjct: 192 EVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIVTAV 250 >gi|120401160|ref|YP_950989.1| hypothetical protein Mvan_0132 [Mycobacterium vanbaalenii PYR-1] gi|119953978|gb|ABM10983.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 265 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 95/239 (39%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + ++ + I Q +++ + +S ++ Sbjct: 19 LEAVGGFVRMCVLVGKATLRPPFQWREFILQSWFLMRVAFLPTLAVSIPLTVLLIFTLNI 78 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FGA S +I + ++G L+T +++AG +AI A++G+ I EEIDA+ +G Sbjct: 79 LLAEFGAADVSGAGAAIGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLG 138 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A LL ++G I ++ + S L Sbjct: 139 IDPIHRLVVPRVVASTFVAILLNGAVITVGLVGGFIFGVYLQNVSAGAYVSTLTLITGLP 198 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+V G V + +G V +V + + ++ + Sbjct: 199 EVVISIVKAATFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257 >gi|254822746|ref|ZP_05227747.1| ABC-transporter integral membrane protein [Mycobacterium intracellulare ATCC 13950] Length = 280 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 7/250 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILISF 176 ++D QA G + K + + G V V ++ Sbjct: 20 VDDFGEQALFYGQTVRYVPNALTRYR--KETVRLIAEMTMGAGALVMIGGTVGVAAFLTL 77 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 +G VIA QG L G E + L + L +R + ++ + +A G+ A++G+M+ Sbjct: 78 ASGGVIAVQGYSSLGHIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR 137 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++EEIDA+ M + V L+S R+ A +I++ L L+ +A A + Sbjct: 138 VSEEIDAVECMAVHSVSYLVSTRLIAGLIAIIPLYSLSVLAAFFAARFTTVYINGQSKGL 197 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 + F++ +++ ++A M+ A+ +V G+ +G V V S+ + Sbjct: 198 YDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSLIV 257 Query: 357 VIIIDSLFAI 366 V++I ++ Sbjct: 258 VVVITLFISL 267 >gi|108797253|ref|YP_637450.1| hypothetical protein Mmcs_0273 [Mycobacterium sp. MCS] gi|119866338|ref|YP_936290.1| hypothetical protein Mkms_0283 [Mycobacterium sp. KMS] gi|126432877|ref|YP_001068568.1| hypothetical protein Mjls_0264 [Mycobacterium sp. JLS] gi|108767672|gb|ABG06394.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692427|gb|ABL89500.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232677|gb|ABN96077.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 256 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 101/240 (42%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + +++ + Q ++V + +L++ +++ Sbjct: 10 LGAVGGLFGMALDAVRFTFRRPFQAREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNI 69 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G L+T +++AG +A+ A++GS I EEI+A+ +G Sbjct: 70 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIEAMEVLG 129 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V L++PR+ A + LL L I+G D+ F + + Sbjct: 130 INPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSVFVQDVNPGAFAAGITLLTGIG 189 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAV-GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G ++ + ++G V VV + + +I+ + Sbjct: 190 EVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALFVINVVVTAI 249 >gi|289642565|ref|ZP_06474708.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289507653|gb|EFD28609.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 6/279 (2%) Query: 93 IKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGF 152 R + N+ + + I D +L ++S + +G+ Sbjct: 6 AAGPSRHRPRSSPAVTNVMIKFPPSLQRVIVDVGQSGQLLAQLVSTAVR------QPRGY 59 Query: 153 LLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIG 212 +MY + L +I L+ GA+ + REI Sbjct: 60 WAETRDEMYAMLRFCWLSCTLAVGGFCFLIGNYAYNILTLLGAQNRLGTVFVFASAREIS 119 Query: 213 VLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTI 272 T + +AG G+A+ A++G+ +I EE+DA++ +GLD +R+L+ PR+ A+ + I Sbjct: 120 PFCTGMAVAGVMGTALTADLGARRIREELDAMKVLGLDAMRVLVLPRVIAITVMTAAFNI 179 Query: 273 LANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEG 332 + + A I D FFS F S T+ ++ ++K + IGIV ++G Sbjct: 180 VGVAVGVAMAMISGTVIGDTSAGSFFSVFLSNVTVPDLVGTVVKTVLIGFFIGIVCAQKG 239 Query: 333 FAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 +G+ V VV + V +I+ + + Sbjct: 240 LNARGGPEGVGRAVNEAVVLCFAAVWVINFVANAVLLGL 278 >gi|50261859|gb|AAT72482.1| AT1G19800 [Arabidopsis lyrata subsp. lyrata] Length = 205 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 90/181 (49%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 G+ K K + ++Q+ G + V +L S G Q + ++ G Sbjct: 25 AGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFTRLGLNRS 84 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++++ RE+ ++T++++AGR GSA AE+G+M+++E+ D +R +G D + LI+P Sbjct: 85 IGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADPIDYLITP 144 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 R+ A ++LP LT++ + ++++ Y I + H +I + +IK+ Sbjct: 145 RVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIVSAMIKSQ 204 Query: 319 F 319 Sbjct: 205 V 205 >gi|226306857|ref|YP_002766817.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229492717|ref|ZP_04386518.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226185974|dbj|BAH34078.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229320376|gb|EEN86196.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 290 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 104/268 (38%), Gaps = 1/268 (0%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + + + I + A + + + + + + Sbjct: 15 KFGRTRARVARTSRSIDDVGRQAVFFARAIAHIPWAIRKHPKEVLRLVAEISMGTGALAV 74 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G V VV ++ +G IA QG L G E + + + +R ++ + ++ Sbjct: 75 IG-GTVAVVGFLTLASGGTIAIQGFSSLGNIGVEALTGFFSAFINVRIAAPVIAGIGLSA 133 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 G+ A+IG+M+I+EEIDA+ +M + V ++S R+ A +I++ L LA + + Sbjct: 134 TIGAGSTAQIGAMRISEEIDALESMAISSVPYVVSTRVTAGMIAILPLYSLALVGSFLAG 193 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + ++ F + ++ ++ MA + ++ G+ + + Sbjct: 194 RFTTVVLFGQSSGLYDHYFTTFLDPVDVAWSFVQVLVMALLVMLIHTYYGYNASGGPSGV 253 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFA 370 G V V S+ V+ + L ++ + Sbjct: 254 GTAVGRGVRLSLICVVAVTLLVSLALYG 281 >gi|183982884|ref|YP_001851175.1| integral membrane protein YrbE3A [Mycobacterium marinum M] gi|183176210|gb|ACC41320.1| conserved hypothetical integral membrane protein YrbE3A [Mycobacterium marinum M] Length = 282 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 96/221 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + T + S ++ + Q ++V +L++ + Sbjct: 37 VRALGDFFAMTLDTFVSMFRPPFAWREYLLQCWFVARVSTLPGVLMTIPWAVISGFLFNV 96 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L+ GA FS +I + + ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 97 LLTDIGAADFSGTGCAIFTVDQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMG 156 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ ++ L+ PR+ A L+ L + +IGA + + + + + Sbjct: 157 INPIQALVVPRVLAATTVSLALSSLVIATGLIGAFLCSVFLMHVSAGAWVTGLTTLTHTV 216 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ +IKA G++A +G +VG +G+ V Sbjct: 217 DVVISMIKATLFGLMAGLIACYKGISVGGGPAGVGRAVNET 257 >gi|118471402|ref|YP_884549.1| ABC transporter transmembrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172689|gb|ABK73585.1| ABC-transporter integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 7/243 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVVILI 174 +F++ A + I + + L + G V ++ + Sbjct: 27 RFLDSMGHVAWFVVQAIVHVPHAFRHYR--RESLRLVAEIGMGTGAMAVIGGTVAIIGFV 84 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + G++IA QG L G E F+ ++ +R + ++T +A G+ AE+G+ Sbjct: 85 TLSAGSLIAIQGFASLGNIGVEAFTGFFAALANIRVVAPVVTGQALAATVGAGATAELGA 144 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+I+EE+DA+ MG+ + L+S RI A I + L +A + + A +V +Y Sbjct: 145 MRISEEVDALEVMGIKSISYLVSTRIMAGAIVIIPLYAMAILLSFMSAQLVTTIFYSQSV 204 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + FH+ + ++ ++ M+ + + G+ + +G+ V + S+ Sbjct: 205 GTYEHYFHTFLRVDDVMWSFLEVIIMSVIVMLNHCYFGYFASGGAVGVGEAVGRSMRTSL 264 Query: 355 SIV 357 + Sbjct: 265 IAI 267 >gi|118467231|ref|YP_881722.1| TrnB1 protein [Mycobacterium avium 104] gi|118168518|gb|ABK69415.1| TrnB1 protein [Mycobacterium avium 104] Length = 261 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 100/236 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + T + + Q ++V + IL+S A+ Sbjct: 17 LREVGSYFALTLDIFVQLVHPPFAWREFVHQAWFVARVSIAPTILLSIPFNALSVFIINV 76 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + IG + T +++AG +AI A++G+ I EE+DA+R MG Sbjct: 77 LLVEIGAADASGAGAALASVAYIGPITTVLVVAGTGATAICADLGARTIREELDAMRVMG 136 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PR+ AL ++ LL + ++G+ + + + + +A Sbjct: 137 INPVQRLLVPRVLALCLNGLLLNSINTIVGLVGSFFFSVYFQHVTPGAWAASLTLLVKIA 196 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++ KA G +A +G VG +G V VV + + +I+ + Sbjct: 197 DVAIAFFKAALFGLVAGTIACYKGVTVGGGPQGVGNAVNETVVYTFMALFVINVVL 252 >gi|300865114|ref|ZP_07109939.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336885|emb|CBN55089.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 290 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + G+ K K +I + VG+ + V+LI+ G + Q A +L +FG Sbjct: 49 TLLLGGQVWLRLLKGKVCRKLVIEHLVTVGLGSLRAVLLIALFAGMIFTIQSARELIRFG 108 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 A +I RE+ +LTA ++AG+ GS AEIG M++ E++DA+ + + V Sbjct: 109 AVGAVGGAFAIAFCRELAPVLTAGVVAGQVGSGFAAEIGEMQVTEQVDALYMLKTNPVDY 168 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 L+ PR+ A I LP+LTI + I G + +Y +P +F + ++ T + Sbjct: 169 LVLPRVVACCIMLPILTIFSVVVGIGGGAFAAAIFYHLPPGMFLESVRTFLEPWDLVTVV 228 Query: 315 IKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF-YFAIGI 373 +K IGI+ G +G+ T VV S + + D ++ + + I Sbjct: 229 VKGVIFGAIIGIIGCGWGLTTTGGGKGVGRSATAAVVTSWVSIFMADFFLSLLMFHELAI 288 >gi|183984679|ref|YP_001852970.1| hypothetical protein MMAR_4711 [Mycobacterium marinum M] gi|183178005|gb|ACC43115.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length = 281 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 98/242 (40%), Gaps = 7/242 (2%) Query: 119 VKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVIL 173 V ++ G I G A+++ + + + G + +V Sbjct: 18 VGTLSRIGDHTLFYGKAI--AGAPFAATHYRREIIRLVAEISMGAGTLAMIGGTLVIVGF 75 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ G +A QG L G E + L + + +R ++ + +A G+ + A++G Sbjct: 76 LTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLG 135 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 +M+INEEIDA+ +M + V L+S RI A ++++ L +A + + + + Sbjct: 136 AMRINEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQFTTVILFGQS 195 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 ++ F + ++ ++A MA I ++ G+ +G V S Sbjct: 196 GGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTS 255 Query: 354 IS 355 + Sbjct: 256 LI 257 >gi|120405353|ref|YP_955182.1| hypothetical protein Mvan_4400 [Mycobacterium vanbaalenii PYR-1] gi|119958171|gb|ABM15176.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 10/259 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVS---------GVPVV 171 ++ + LGL G S+ ++RQ+ +G V +V Sbjct: 14 LSQWAAGLDRLGLQTLFYGHTLRSTGDAAIHYRAEILRQIAQMGFGVGALAAIGGTVVIV 73 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ GA++A G QLSQ G E + + + +R IG L+ + +A G+ A+ Sbjct: 74 SFLTVSVGALVAVIGFNQLSQVGVEALTGFISAFFNVRLIGPLIAGIALAATIGAGTTAQ 133 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+INEEIDA+ MG+ V L S R+ A + + L +A SA + A + +Y Sbjct: 134 LGAMRINEEIDALEVMGVRSVSYLASTRLIAGTLVVVPLYCVALISAFVAAKVGTTVFYG 193 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 V+ F++ ++ + A MA I +V GF +G+ V V Sbjct: 194 QSVGVYEHYFYTFLNPDSVVWSFLLAVTMAVVIMLVHTYYGFNAAGGPAGVGQAVGQSVR 253 Query: 352 QSISIVIIIDSLFAIFYFA 370 S+ ++ ++ + Sbjct: 254 ASLVAATVMTMFVSLALYG 272 >gi|296169577|ref|ZP_06851197.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895843|gb|EFG75538.1| integral membrane protein YrbE4a [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 249 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 103/240 (42%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + ++ + Q ++V + +L++ +++ Sbjct: 1 MEAVGGLFAMSADAIKFVFRRPFQWREFLEQSWFVARVAIAPTLLVAIPFTVLVSFTLNI 60 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S + + ++G L+T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 61 LLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLG 120 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G + D+ F + + Sbjct: 121 INPVQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYVFSVFVQDVNPGAFAAGITLLTGVP 180 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G G + ++G V VV + + +++ + Sbjct: 181 EVIISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLFVVNVVVTAI 240 >gi|326331673|ref|ZP_08197961.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] gi|325950472|gb|EGD42524.1| ABC-transporter integral membrane protein [Nocardioidaceae bacterium Broad-1] Length = 273 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 109/261 (41%), Gaps = 4/261 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK----FKGFLLSLIRQMYYVGVSGVPVV 171 + +G I+ E CA + + + Q +++ + Sbjct: 8 RLATGLWRRFAEGLRTVGETIALGAEACAYAARDIVTGRFDWAQAADQAWFMARVSLLPT 67 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 IL++ G V + Q + GA FS + + LR+ L+T+++IA GSAI ++ Sbjct: 68 ILVAIPFGVVTSIQVGAVANSIGASSFSGAVNGVGVLRQAAPLVTSLIIACVVGSAICSD 127 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G I +EI A+ MG + V+ +++PRI A + +LT + +AI ++ Sbjct: 128 LGMRAIRDEIAALEVMGTNPVQRMVAPRIVAAVFLSVMLTAIVAVAAIATGYVMNVGRGV 187 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + F + + A+++ KA VA +G + V VV Sbjct: 188 VGAGTYLDAFTNFSQSADLWLAEGKAVLFGLIGTTVAAHKGLGATGGPQGVADAVNQTVV 247 Query: 352 QSISIVIIIDSLFAIFYFAIG 372 ++ ++ +++++ Y A+ Sbjct: 248 LNVIVLAVVNAVVTQGYLALA 268 >gi|145221308|ref|YP_001131986.1| hypothetical protein Mflv_0713 [Mycobacterium gilvum PYR-GCK] gi|315441804|ref|YP_004074683.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213794|gb|ABP43198.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260107|gb|ADT96848.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 265 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 96/239 (40%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + ++++ I Q +++ + +S ++ Sbjct: 19 LLAVGGFVRMCVLVGKATFRTPFQWREFILQSWFLLRVAFLPTVAVSIPLTVLLIFTLNI 78 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FGA S ++ + ++G L+T +++AG +AI A++G+ I EEIDA+ +G Sbjct: 79 LLTEFGAADISGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTIREEIDALEVLG 138 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A LL ++G I ++ + S L Sbjct: 139 IDPIHRLVVPRVIASTFVAMLLNGAVITIGLVGGFIFGVYLQNVSAGAYVSTLTLVTGLP 198 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + L+KA G+V G V + +G V +V + + ++ + Sbjct: 199 EVLISLVKALTFGLIAGLVGCYRGLTVAGGAKGVGTAVNETLVLCVIALFAVNVVLTTI 257 >gi|108798493|ref|YP_638690.1| hypothetical protein Mmcs_1523 [Mycobacterium sp. MCS] gi|108768912|gb|ABG07634.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] Length = 272 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV------- 168 +++ +++ G +K L L+ QM +GV + Sbjct: 3 RRVAGWVDGLSRIGTQAQFYFQTLGSTKDVVIHYKVELFRLVAQM-SLGVGALAVVGGTV 61 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 +V ++ TGA++A QG Q + G E + + +R IG ++ + +A G+ Sbjct: 62 VIVGFLTLSTGALVAVQGYNQFADVGVEALTGFASAYFNVRLIGPVIAGIGLAATIGAGA 121 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G+M+INEEIDA+ MG+ V L S R+ A +I + L +A SA A Sbjct: 122 TAQLGAMRINEEIDALEVMGVRSVAYLASSRVLAGVIVVIPLYCVAVLSAFWAARFGTIA 181 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 Y V+ F + +I +A MA I +V GF +G+ V Sbjct: 182 IYGQSSGVYDHYFTTFLNSTDIIWSFFQAIAMAIVIMLVHTYYGFTATGGPAGVGEAVGR 241 Query: 349 CVVQSISIVIIIDSLFAIFYFAIGI 373 V S+ ++ + + ++ I Sbjct: 242 AVRTSLIA-----AVLVVLFLSLAI 261 >gi|229492731|ref|ZP_04386532.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320390|gb|EEN86210.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 257 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 98/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + ++ + + + Q + + + +L++ +++ Sbjct: 12 MRELGQFYRMGADVAVGLFRTRFQMQEFLEQSWMIARVSIVPTVLVAVPFTVLVSFTLNI 71 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L + GA S ++ + ++G ++T +++AG +AI A++GS I EEIDA+ +G Sbjct: 72 LLREIGAADLSGAGAALGAVTQVGPVVTVLIVAGAGATAIAADLGSRTIREEIDAMEVLG 131 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A + LL L I G + F L Sbjct: 132 IDPITRLVIPRVVASTVVALLLNGLVCVIGIAGGYAFSVFLQGVNPGAFVEGITLLTGLP 191 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+VA G +V +G+ V VV + + +++++ Sbjct: 192 EVALSMVKAALFGMLAGLVACYRGLSVRGGPKGVGEAVNETVVYAFMALFVVNTIVTAV 250 >gi|126432720|ref|YP_001068411.1| hypothetical protein Mjls_0107 [Mycobacterium sp. JLS] gi|126232520|gb|ABN95920.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 297 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 105/261 (40%), Gaps = 1/261 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + Y + L + + + + +G + + + + Sbjct: 16 RQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMG 75 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M +G V +V ++ G++IA QG L G E F+ +++ +R +++ Sbjct: 76 TGAMAVIG-GTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVS 134 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +A G+ AE+G+M+I+EEIDA+ MG+ + L+S RI A I + L +A Sbjct: 135 GQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAII 194 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + A + +Y + F + ++ ++A ++ + + G+ Sbjct: 195 MSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMLNHCYYGYYAS 254 Query: 337 VHSNSLGKKVTTCVVQSISIV 357 +G+ V + S+ + Sbjct: 255 GGPVGVGEAVGRSMRASLIAI 275 >gi|145222688|ref|YP_001133366.1| hypothetical protein Mflv_2100 [Mycobacterium gilvum PYR-GCK] gi|315443152|ref|YP_004076031.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145215174|gb|ABP44578.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315261455|gb|ADT98196.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 284 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 103/263 (39%), Gaps = 15/263 (5%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 +S + I N Q G + + + L+RQ+ Sbjct: 5 RPHSQFPWLKARFRSIADPWNQVGVQTKFYGRTLRSIVIAVTRYR------IELVRQIAQ 58 Query: 163 VGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 +G+ V +V ++ TGA++A QG S+ G E + + +R I Sbjct: 59 MGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYTDFSEIGVEALTGFASAFFNVRLIAP 118 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 TAV +A G+ A++G+M+INEEIDA+ MG+ V L S R+ A ++ + L + Sbjct: 119 ATTAVALAATIGAGATAQLGAMRINEEIDALEVMGIRSVAYLASTRVLAGLLVVIPLYCV 178 Query: 274 ANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 ++ A Y V+ F + ++ + +A I +V GF Sbjct: 179 GVLASFWAARFGTTVIYGQSTGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGF 238 Query: 334 AVGVHSNSLGKKVTTCVVQSISI 356 + +G+ V V S+ + Sbjct: 239 SARGGPAGVGEAVGRAVRTSLIL 261 >gi|218658451|ref|ZP_03514381.1| probable ABC transporter, permease protein [Rhizobium etli IE4771] Length = 184 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 89/155 (57%), Positives = 117/155 (75%) Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 ++MIAGRSGSAI AEIGSMK+ EEIDA++ MGL+ + +LI PR+ AL I+LPLLT+LANF Sbjct: 28 SIMIAGRSGSAITAEIGSMKMREEIDALKVMGLNPIGVLIFPRLVALTIALPLLTVLANF 87 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 +++ GA+ V W Y I FA F +R H TL+ + +G+IKAPFMA IGIVA EG VG Sbjct: 88 ASLAGAAAVAWGYSGITFANFLARLHEAVTLSTVLSGMIKAPFMALVIGIVAAVEGLKVG 147 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 + SLG+ VT VV++I +VI++D LFA+FY AI Sbjct: 148 GSAESLGQHVTASVVKAIFVVILMDGLFAMFYAAI 182 >gi|311743965|ref|ZP_07717771.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311313095|gb|EFQ83006.1| ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 275 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 2/225 (0%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 D+ ILG I K Q +++ +L++ G +IA Sbjct: 24 DTFGAMVILG--IGALRYIATDIVTRKFSWKEFYDQAWFMTRVAFLPTVLVAIPFGIIIA 81 Query: 184 QQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDA 243 Q Q GA F+ + I LR+ L+T++++AG GSAI A++G+ + EE+DA Sbjct: 82 IQVGAVAQQIGAVSFTGAVNGIGILRQAAPLVTSLLMAGAVGSAICAQLGAQTVREEVDA 141 Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 ++ MGL+ V+ +++PR+ A ++ LL + +A++ ++ + + F + Sbjct: 142 MKVMGLNPVQRIVAPRVAAAMVVGALLNVFVAATAMVTGYLINVGGGAVSSGAYLGSFIA 201 Query: 304 TATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 A ++ KA I+A +G + V Sbjct: 202 FAQPTDLLLAEGKAVIFGFLATIIAAHKGLNASGGPKGVADAVNQ 246 >gi|213584877|ref|ZP_03366703.1| hypothetical protein SentesTyph_28030 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 179 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%) Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R Sbjct: 2 AETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRR 61 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTG 313 +ISPR WA +ISLPLLTI+ I G S+V + I F+S + ++ Sbjct: 62 VISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNC 121 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 LIK+ A + +A+ G+ S + + T VV + V+ +D + F Sbjct: 122 LIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 178 >gi|15609102|ref|NP_216481.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Rv] gi|15841440|ref|NP_336477.1| hypothetical protein MT2017 [Mycobacterium tuberculosis CDC1551] gi|148661774|ref|YP_001283297.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra] gi|148823179|ref|YP_001287933.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis F11] gi|253798987|ref|YP_003031988.1| hypothetical protein TBMG_02025 [Mycobacterium tuberculosis KZN 1435] gi|254232135|ref|ZP_04925462.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis C] gi|254364784|ref|ZP_04980830.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis str. Haarlem] gi|260201058|ref|ZP_05768549.1| hypothetical protein MtubT4_13284 [Mycobacterium tuberculosis T46] gi|289443449|ref|ZP_06433193.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T46] gi|289570055|ref|ZP_06450282.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T17] gi|289746096|ref|ZP_06505474.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|289750549|ref|ZP_06509927.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T92] gi|289754062|ref|ZP_06513440.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|289758075|ref|ZP_06517453.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289762120|ref|ZP_06521498.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis GM 1503] gi|294996887|ref|ZP_06802578.1| hypothetical protein Mtub2_20873 [Mycobacterium tuberculosis 210] gi|297634534|ref|ZP_06952314.1| hypothetical protein MtubK4_10446 [Mycobacterium tuberculosis KZN 4207] gi|297731522|ref|ZP_06960640.1| hypothetical protein MtubKR_10551 [Mycobacterium tuberculosis KZN R506] gi|306776197|ref|ZP_07414534.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu001] gi|306779978|ref|ZP_07418315.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu002] gi|306784728|ref|ZP_07423050.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu003] gi|306789085|ref|ZP_07427407.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu004] gi|306793420|ref|ZP_07431722.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu005] gi|306797803|ref|ZP_07436105.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu006] gi|306803684|ref|ZP_07440352.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu008] gi|306808258|ref|ZP_07444926.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu007] gi|306968081|ref|ZP_07480742.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu009] gi|306972306|ref|ZP_07484967.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu010] gi|307080017|ref|ZP_07489187.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu011] gi|307084591|ref|ZP_07493704.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu012] gi|313658855|ref|ZP_07815735.1| hypothetical protein MtubKV_10561 [Mycobacterium tuberculosis KZN V2475] gi|2950435|emb|CAA17838.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE3B [Mycobacterium tuberculosis H37Rv] gi|13881679|gb|AAK46291.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124601194|gb|EAY60204.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis C] gi|134150298|gb|EBA42343.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis str. Haarlem] gi|148505926|gb|ABQ73735.1| conserved hypothetical integral membrane protein YrbE3b [Mycobacterium tuberculosis H37Ra] gi|148721706|gb|ABR06331.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis F11] gi|253320490|gb|ACT25093.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 1435] gi|289416368|gb|EFD13608.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T46] gi|289543809|gb|EFD47457.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T17] gi|289686624|gb|EFD54112.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|289691136|gb|EFD58565.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis T92] gi|289694649|gb|EFD62078.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|289709626|gb|EFD73642.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis GM 1503] gi|289713639|gb|EFD77651.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|308215377|gb|EFO74776.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu001] gi|308327132|gb|EFP15983.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu002] gi|308330568|gb|EFP19419.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu003] gi|308334402|gb|EFP23253.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu004] gi|308338198|gb|EFP27049.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu005] gi|308341893|gb|EFP30744.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu006] gi|308345382|gb|EFP34233.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu007] gi|308349685|gb|EFP38536.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu008] gi|308354315|gb|EFP43166.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu009] gi|308358257|gb|EFP47108.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu010] gi|308362185|gb|EFP51036.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu011] gi|308365842|gb|EFP54693.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis SUMu012] gi|323719530|gb|EGB28656.1| hypothetical protein TMMG_01226 [Mycobacterium tuberculosis CDC1551A] gi|326903572|gb|EGE50505.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis W-148] gi|328458742|gb|AEB04165.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 4207] Length = 271 Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 9/257 (3%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV-----P 169 K +V N SQ ++ + +G LL +I QM GV V Sbjct: 5 KALVSEWNRMGSQMRFFVGTLAGIPDALMHY---RGELLRVIAQMGLGTGVLAVIGGTVA 61 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ TGA++A QG Q + G E + + REI V +A G+ Sbjct: 62 IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTT 121 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A +G+M+INEEIDA+ +G+ + L S R+ A ++ L + +A + A + Sbjct: 122 AALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAI 181 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y V+ F++ ++ ++ +A I +V G+A +G+ V Sbjct: 182 YGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRA 241 Query: 350 VVQSISIVIIIDSLFAI 366 V S+ + I + + Sbjct: 242 VRASMVVASIAILVMTL 258 >gi|118619253|ref|YP_907585.1| membrane protein YrbE4B [Mycobacterium ulcerans Agy99] gi|118571363|gb|ABL06114.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium ulcerans Agy99] Length = 280 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 111/261 (42%), Gaps = 1/261 (0%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 F + + + + + + + T + + + + + +G Sbjct: 8 RFHRFMSRLARPVDNLGEQALFYGETVRYIPNATTRYRKETIRLVAEMTLGAGALVMIG- 66 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G Sbjct: 67 GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+++EEIDA+ M + V L+S R+ A ++++ L LA +A A Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFT 186 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ F++ +++ ++A MA A+ +V G+ S +G Sbjct: 187 TVFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIA 246 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ +V++I ++ Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267 >gi|240170055|ref|ZP_04748714.1| hypothetical integral membrane protein [Mycobacterium kansasii ATCC 12478] Length = 280 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 5/249 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 ++ QA G + + + + +G V V ++ Sbjct: 20 VDSFGEQALFYGETVRYIPNAITRYRKETIRLVAEMTLGAGALVMIG-GTVGVAAFLTLA 78 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G VIA QG L G E + L + L +R + ++ + +A G+ A++G+M++ Sbjct: 79 SGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRV 138 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +EEIDA+ M + V L+S R+ A ++++ L L+ +A A ++ Sbjct: 139 SEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFINGQSKGLY 198 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F++ +++ ++A M+ A+ +V G+ S +G V V S+ +V Sbjct: 199 DHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGSVGVGIAVGQAVRTSLIVV 258 Query: 358 IIIDSLFAI 366 ++I ++ Sbjct: 259 VVITLFISL 267 >gi|315443551|ref|YP_004076430.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315261854|gb|ADT98595.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSG-------- 167 ++V + + LG + G A +IR + + + Sbjct: 13 RLVDNLGRPVAVLGRLGDHVLFYGRAVAGVPHAAVHFRKEIIRLIAEISMGAGTLAMIGG 72 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V +V ++ G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 73 TVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGA 132 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A + I + Sbjct: 133 GVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIASQFTT 192 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F + ++ ++A MA AI +V G+ + +G V Sbjct: 193 VVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGVGAAV 252 Query: 347 TTCVV 351 V Sbjct: 253 GNAVR 257 >gi|183984956|ref|YP_001853247.1| membrane protein YrbE4B [Mycobacterium marinum M] gi|183178282|gb|ACC43392.1| conserved hypothetical membrane protein YrbE4B [Mycobacterium marinum M] Length = 280 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 5/249 (2%) Query: 122 INDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 +++ QA G + + + + +G V V ++ Sbjct: 20 VDNFGEQALFYGETVRYIPNAITRYRKETIRLVAEMTLGAGALVMIG-GTVGVAAFLTLA 78 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 +G VIA QG L G E + L + L +R + ++ + +A G+ A++G+M++ Sbjct: 79 SGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRV 138 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 +EEIDA+ M + V L+S R+ A ++++ L LA +A A ++ Sbjct: 139 SEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTVFINGQSAGLY 198 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 F++ +++ ++A MA A+ +V G+ S +G V V S+ +V Sbjct: 199 DHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGGSVGVGIAVGQAVRTSLIVV 258 Query: 358 IIIDSLFAI 366 ++I ++ Sbjct: 259 VVITLFISL 267 >gi|145225118|ref|YP_001135796.1| hypothetical protein Mflv_4540 [Mycobacterium gilvum PYR-GCK] gi|145217604|gb|ABP47008.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 270 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 107/249 (42%), Gaps = 1/249 (0%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + +G ++S + + ++ + Q ++V + +L++ Sbjct: 15 GLRSGMSTPMQGIGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFT 74 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 +++ LS+ GA S + + ++G ++T +++AG +A+ A++GS I E Sbjct: 75 VLVSFTLNILLSELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIRE 134 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 EIDA+ +G++ V+ L++PR+ A + LL L I+G + + F + Sbjct: 135 EIDALEVLGINPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAA 194 Query: 300 RFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVI 358 + + +KA G+VA G ++ + ++G V VV + + Sbjct: 195 GITLLTGVPEVIISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALF 254 Query: 359 IIDSLFAIF 367 +++ + Sbjct: 255 VVNVVVTAI 263 >gi|120404937|ref|YP_954766.1| hypothetical protein Mvan_3983 [Mycobacterium vanbaalenii PYR-1] gi|119957755|gb|ABM14760.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 15/246 (6%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPV 170 N +Q ++ + L+R + +G+ V + Sbjct: 22 AGWNRIGAQMRFYAETLAAVPDAVVHYR------TELLRLIAQMGLGSGALVVVGGTVAI 75 Query: 171 VILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVA 230 V ++ TGA++A QG QL+ G E + + +R I T+V ++ G+A A Sbjct: 76 VGFLTMTTGALVAVQGYNQLASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATA 135 Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 ++G+M+INEEIDA+ +G+ V L + R+ A +I + L +A A + A Y Sbjct: 136 QLGAMRINEEIDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVIY 195 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 V+ F + + ++ + M I +V GF +G+ V V Sbjct: 196 GQGSGVYDHYFGTFLSPTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGPAGVGEAVGRAV 255 Query: 351 VQSISI 356 S+ + Sbjct: 256 RTSMVV 261 >gi|254818326|ref|ZP_05223327.1| hypothetical protein MintA_00280 [Mycobacterium intracellulare ATCC 13950] Length = 255 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 103/237 (43%), Gaps = 1/237 (0%) Query: 132 LGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLS 191 +G + + + + ++ + Q +++ + +L++ +++ L Sbjct: 12 IGGLFAMSADAVKFLFQRPFQWREFLEQSWFIARVAIAPTLLVAIPFTVLVSFTLNILLR 71 Query: 192 QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDF 251 + GA S + + +IG ++T +++AG +A+ A++GS I EEIDA+ +G++ Sbjct: 72 ELGAADLSGAGAAFGAVTQIGPMVTVLIVAGAGSTAMCADLGSRTIREEIDAMEVLGINP 131 Query: 252 VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIF 311 V+ L++PR+ A + LL L I+G D+ F + + + Sbjct: 132 VQRLVTPRMLAAGLVALLLNSLVVIIGIVGGYAFSVFIQDVNPGAFAAGITLLTGVPEVI 191 Query: 312 TGLIKAPFMACAIGIVAMKEGFA-VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +KA G+VA G G + ++G V VV + +++++ + Sbjct: 192 ISCVKAALFGLIAGLVACYRGLTITGGGAKAVGNAVNETVVYAFMSLMVVNVVVTAI 248 >gi|315445485|ref|YP_004078364.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|315263788|gb|ADU00530.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 270 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 105/240 (43%), Gaps = 1/240 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G ++S + + ++ + Q ++V + +L++ +++ Sbjct: 24 MQGIGGLLSMSADAVKFLFRRPFQTSEFLLQSWFVARVSLAPTLLVAIPFTVLVSFTLNI 83 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 LS+ GA S + + ++G ++T +++AG +A+ A++GS I EEIDA+ +G Sbjct: 84 LLSELGAADLSGAGAAFGAVTQVGPMVTVLIVAGAGATAMCADLGSRTIREEIDALEVLG 143 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L++PR+ A + LL L I+G + + F + + Sbjct: 144 INPVQRLVTPRMLASGLVALLLNSLVVIIGIVGGYVFSIFVQGVNPGAFAAGITLLTGVP 203 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVG-VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + +KA G+VA G ++ + ++G V VV + + +++ + Sbjct: 204 EVIISCVKAALFGLIAGLVACYRGLSISTGGAKAVGNAVNETVVYAFMALFVVNVVVTAI 263 >gi|297518302|ref|ZP_06936688.1| toluene ABC transporter, permease protein [Escherichia coli OP50] Length = 174 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 1/173 (0%) Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ E++ ++ M +D +R +ISP Sbjct: 1 MGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISP 60 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKA 317 R WA +ISLPLLT++ I G S+V + I F+S + ++ LIK+ Sbjct: 61 RFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKS 120 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 A + +++ G+ S + + T VV S V+ +D + F Sbjct: 121 VVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFG 173 >gi|145223094|ref|YP_001133772.1| hypothetical protein Mflv_2507 [Mycobacterium gilvum PYR-GCK] gi|145215580|gb|ABP44984.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] Length = 285 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 10/245 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL-SLIRQMYYVGVSG-------- 167 ++V + + LG + G A +IR + + + Sbjct: 13 RLVGNLGRPVAVLGRLGDHVLFYGRAVAGVPHAAVHFRKEIIRLIAEISMGAGTLAMIGG 72 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 V +V ++ G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 73 TVVIVGFLTLAAGGTLAIQGYSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGA 132 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEEIDA+ +MG+ V L+S RI A ++++ L +A + I + Sbjct: 133 GVTAQLGAMRINEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIASQFTT 192 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F + ++ ++A MA AI +V G+ + +G V Sbjct: 193 VVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFASGGPSGVGAAV 252 Query: 347 TTCVV 351 V Sbjct: 253 GNAVR 257 >gi|239787370|emb|CAX83846.1| ABC transporter permease protein [uncultured bacterium] Length = 168 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 61/167 (36%), Positives = 101/167 (60%) Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 M++ +RE L+T +++AGRSGSA+ A +G+M+IN+EIDA+ MG+D VR L++P + A Sbjct: 1 MALSVVREFAPLITGIVVAGRSGSALAARLGTMRINQEIDALHVMGIDPVRFLVAPALLA 60 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMAC 322 +++ LPLLT+LA+F A+ GA + I + F ++ R + ++ GL K+ A Sbjct: 61 MLVVLPLLTLLADFVALTGAGMYICMDLGMDFPAYWERVIEALKVDDLGHGLGKSVIFAV 120 Query: 323 AIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + +V + G V + +GK T VV +IS +++ D LFA Sbjct: 121 LVTLVGVVNGSLVQGGAEGVGKATTRSVVHAISAIVVTDMLFAFVLT 167 >gi|254820119|ref|ZP_05225120.1| hypothetical protein MintA_09341 [Mycobacterium intracellulare ATCC 13950] Length = 256 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 100/239 (41%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + Q ++V + +++S + Sbjct: 12 VRSVGDFFALALDTLLQIPRRPFAGREFLLQSWFVARVSIAPTMMLSIPFTVLTVFTINI 71 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG L+T +++AG +A+ A++G+ I EE+DA+R +G Sbjct: 72 LLIEFGAGDFSGSGAALATVTQIGPLVTVLVVAGAGATAMCADLGARTIREELDALRVLG 131 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ + L+ PR+ A LL+ + + ++G + F + Sbjct: 132 INPIGSLVVPRVLAATFVSLLLSGVVIVTGLVGGFEFSVFVQHVTPGSFAAGLTLLTGAR 191 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + L+KA ++A +G +VG + ++G V VV S + ID + Sbjct: 192 ELVIALVKAGLFGLTASLIACYKGISVGRGAAAVGNAVNETVVFSFMSLFFIDVVVTAV 250 >gi|254818327|ref|ZP_05223328.1| hypothetical protein MintA_00285 [Mycobacterium intracellulare ATCC 13950] Length = 261 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 98/234 (41%), Gaps = 1/234 (0%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFV 177 + + + + A L V T + + + + +G + +V ++ Sbjct: 1 MSRIGDHTLFYARALAGVPFATAHYRREIIRLIAEISMGAGTLAMIG-GTLGIVGFMTLA 59 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 G V+A QG L G E + L + + +R ++ + +A G+ + A++G+M+I Sbjct: 60 AGGVLAVQGYSSLGNIGIEALTGFLSAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMRI 119 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+ +M + V L+S RI A ++++ L +A + + + + + ++ Sbjct: 120 NEEIDALESMAIRPVSYLVSTRIVAGMLAVTPLYSIAVILSFVASQFITVFMFGQSSGLY 179 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 F + ++ ++A MA + ++ G+ +G V Sbjct: 180 QHYFTTFLNPIDLLWSFLQAVLMALTVLLIHTYFGYFASGGPAGVGVATGNAVR 233 >gi|118469614|ref|YP_884548.1| hypothetical protein MSMEG_0132 [Mycobacterium smegmatis str. MC2 155] gi|118170901|gb|ABK71797.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 266 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 92/239 (38%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + Q +++ + +S +I Sbjct: 20 LATVGGFFKMSVMTGKALFTRPFQWKEFVLQSWFLIRVAFLPTLAVSIPLTVLIIFTLNI 79 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L++FGA S ++ + ++G L+T +++AG +AI A++G+ + EEIDA+ +G Sbjct: 80 LLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAICADLGARTVREEIDALEVLG 139 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D + L+ PR+ A +L ++G ++ + S Sbjct: 140 IDPIERLVVPRVVASTFVAFMLNGAVITIGLVGGFFFGVYIQNVSAGAYVSTLTLLTGFP 199 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + ++KA G+V G V S +G V +V + + ++ + Sbjct: 200 EVLISVVKATLFGMIAGLVGCYRGLTVAGGSKGVGTAVNETLVLCVVALFAVNVVLTTI 258 >gi|240170398|ref|ZP_04749057.1| hypothetical protein MkanA1_13890 [Mycobacterium kansasii ATCC 12478] Length = 281 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 100/245 (40%), Gaps = 10/245 (4%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSG-------- 167 ++ + + +G G+ A + + ++R + + + Sbjct: 9 RLTRQLQKPVGTLSRIGDHTLFYGKALAGAPFAATHYRREIVRLVAEISMGAGTLAMIGG 68 Query: 168 -VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +V ++ G +A QG L G E + L + + +R ++ + +A G+ Sbjct: 69 TLVIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGA 128 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 + A++G+M+INEEIDA+ +M + + L+S RI A ++++ L +A + + + V Sbjct: 129 GVTAQLGAMRINEEIDALESMAIRPISYLVSTRIVAGMLAITPLYSIAVILSFLASQFVT 188 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 + ++ F + ++ ++A MA I ++ G+ +G Sbjct: 189 VVLFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMALTILLIHTYFGYFASGGPAGVGVAT 248 Query: 347 TTCVV 351 V Sbjct: 249 GNAVR 253 >gi|145221307|ref|YP_001131985.1| hypothetical protein Mflv_0712 [Mycobacterium gilvum PYR-GCK] gi|315441805|ref|YP_004074684.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145213793|gb|ABP43197.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260108|gb|ADT96849.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 290 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 109/276 (39%), Gaps = 1/276 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + G+ + + + +G + + + + Sbjct: 9 RSRFPRGVARAEKIVGAPGRGLDSIGHVAWFVVTAVGSIGHAVRYYRKEMLRLIAEIGMG 68 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R ++ Sbjct: 69 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVA 127 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +A G+ AE+G+M+I+EEIDA+ MG+ + L+S RI A + + L +A Sbjct: 128 GQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIVAGFVVIIPLYAMAII 187 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + A +Y + F + ++F ++A ++ + + GF Sbjct: 188 MSFLSAQATTTIFYGQSTGTYEHYFRTFLRPDDVFWSFVQAVIISVIVMLNHCYYGFYAS 247 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 +G+ V + S+ ++ + ++ + + Sbjct: 248 GGPVGVGEAVGRSMRASLVAIVCVVLFASLALYGVD 283 >gi|167946701|ref|ZP_02533775.1| hypothetical protein Epers_09188 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 258 Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 5/253 (1%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSYKF-----KGFLLSLIRQMYYVGVSGVPVVILIS 175 S + + ++ S + + I Q+ + G+ +P + +++ Sbjct: 5 LGRRSLNYLLYIIDLVVFVMAVMRSWRNRGGLFNRASRAASITQLIFSGIDALPTITILA 64 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 G + Q F FG E L++ L E G LLTA+++ GRSGSAI ++G+M Sbjct: 65 LAVGLSVTTQLIFAAQVFGQEADVASLLANLVALEFGSLLTAIVMIGRSGSAIAVDLGNM 124 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +N E++ + +G+D +SPR+ ++I+ +L I + +++ + Sbjct: 125 SLNREVEGLELLGIDVHAFFVSPRLIGMVIAQLVLAIYFSAFSLVTGITLAALLESTSNF 184 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 + S ++ IK IG A +G +VG + + +V S+ Sbjct: 185 KYLFAVVSAFEPLDLLLFFIKNLLFGLVIGANACLKGLSVGQSVTQVPQVTQKAIVNSLV 244 Query: 356 IVIIIDSLFAIFY 368 +V ++D +F + Sbjct: 245 MVFVLDGVFVLIL 257 >gi|126436762|ref|YP_001072453.1| hypothetical protein Mjls_4190 [Mycobacterium sp. JLS] gi|126236562|gb|ABN99962.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 255 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 103/239 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + + + I Q ++V + +++S + Sbjct: 11 VRALGDFFALAADTMMLIPRRPFAGREFILQTWFVARVSLVPTLMLSIPFTVLTVFTLNV 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS ++ + +IG L++ +++AG +A+ A++GS I EE+DA+R +G Sbjct: 71 LLLEFGAGDFSGSGAALAAVTQIGPLVSVLVVAGAGATAMCADLGSRTIREELDALRVLG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ V+ L+ PR+ A + LL+ + + ++G ++ F + Sbjct: 131 INPVQALVVPRVLAATLVSLLLSGVVIVTGLVGGFGFSVFVQNVTPGSFVAGITLLTGAP 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + L+KA ++A +G +VG ++G V VV S + +ID + Sbjct: 191 ELGIALVKAGLFGLTASLLACYKGISVGGGPAAVGNAVNETVVYSFVSLFVIDVIVTAV 249 >gi|183980442|ref|YP_001848733.1| integral membrane protein YrbE1B [Mycobacterium marinum M] gi|183173768|gb|ACC38878.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium marinum M] Length = 289 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 7/254 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + + + +++S A + + +G K L + + Sbjct: 10 RFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYR--KEILRLIAQIGMG 67 Query: 163 VGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 G V +V ++ ++IA QG L G E F+ +++ +R G ++T Sbjct: 68 TGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAGPVVTG 127 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 128 VALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLASTRIMAGLVVIIPLYALAMIM 187 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + +V Y + F + ++F ++A +A + + G+ G Sbjct: 188 SFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYGYNAGG 247 Query: 338 HSNSLGKKVTTCVV 351 +G+ V + Sbjct: 248 GPVGVGEAVGRSMR 261 >gi|120406151|ref|YP_955980.1| hypothetical protein Mvan_5203 [Mycobacterium vanbaalenii PYR-1] gi|119958969|gb|ABM15974.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 108/261 (41%), Gaps = 1/261 (0%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 F+ L + + + V + + + + + + +G Sbjct: 8 RFRRLLRFFPRAVDTVGEQALFYGETFRYVPNALTRYRKETIRLIAEMSMGTGALVMIG- 66 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G Sbjct: 67 GTVGVAAFMTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIG 126 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M++ EEIDA+ +M + V L+S R+ A +I++ L L+ +A A Sbjct: 127 AGATAQLGAMRVAEEIDAVESMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFT 186 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ F++ +++ ++A M+ A+ +V G+ +G Sbjct: 187 TVYINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIA 246 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ +V+ I ++ Sbjct: 247 VGQAVRTSLIVVVTIVLFISL 267 >gi|296165083|ref|ZP_06847636.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899576|gb|EFG79029.1| integral membrane protein YRBE1A [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 264 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 91/232 (39%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + K I +++ + I +S ++ L++ GA Sbjct: 25 FFRMCVLTGKALKQPFEWREFIWNGWFLMRVSLLPTIAVSIPETVLLIFTLNLLLAEIGA 84 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 S +I + ++G ++T +++AG G+AI A++G+ I EEIDA+ +G+D + L Sbjct: 85 ADVSGAGAAIGAVTQLGPIVTVLVVAGAGGTAICADLGARTIREEIDALEVLGIDPIHRL 144 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A + LL L + G + ++ + S + L + I Sbjct: 145 VVPRVVASTMVAVLLNGLVVAVGLGGGYLFSVYLQNVSSGAYLSTLTALTGLPEVVIAFI 204 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 KA G+V G V S LG V VV + +++ Sbjct: 205 KAATFGLIAGLVGCYRGLIVRGGSKGLGTAVNETVVLCFIALFAVNAALTTI 256 >gi|302523372|ref|ZP_07275714.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] gi|318059764|ref|ZP_07978487.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actG] gi|318075808|ref|ZP_07983140.1| ABC-transporter integral membrane protein [Streptomyces sp. SA3_actF] gi|302432267|gb|EFL04083.1| ABC-transporter integral membrane protein [Streptomyces sp. SPB78] Length = 268 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 91/201 (45%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V+I ++ TG V+ QG + Q G + + + RE+ L+ + ++ G Sbjct: 55 GTVGVMIGMTAATGTVVGLQGFAAMDQIGTAPLTGFVTAYFNTREVAPLVAGLALSATVG 114 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+INEE+DA+ MG+ + L++ RI A ++++ L L S+ + + +V Sbjct: 115 AGFTAQLGAMRINEEVDALEGMGIRAMPYLVTTRIIAGVVAIIPLYALGLLSSYVASRVV 174 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 + + F+ ++ ++K + + + GF +G Sbjct: 175 TVVFNGQSSGTYDHYFNLFLVPEDVLLSVLKVLVFSVMVILAHCYYGFRAQGGPAGVGVA 234 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V +I ++ + D ++ Sbjct: 235 VGRSVRNAIVLIAVTDFFLSL 255 >gi|183982885|ref|YP_001851176.1| integral membrane protein, YrbE3B [Mycobacterium marinum M] gi|183176211|gb|ACC41321.1| conserved hypothetical integral membrane protein, YrbE3B [Mycobacterium marinum M] Length = 284 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 14/260 (5%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY------VGVSGVP 169 K +V+ N SQ ++ + + LL +I QM + V V Sbjct: 18 KSLVREWNRLGSQMRFYVTTLTGIPDAVMHY---RSELLRVIAQMGFGAGTLAVIGGTVV 74 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 +V ++ TGA++A QG Q + G E + + REI V +A G+ Sbjct: 75 IVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGAT 134 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+M+INEEIDA+ +G+ V L S R+ A ++ L + +A + A Sbjct: 135 AQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAGTTAI 194 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 Y V+ F++ ++ + +A I +V G+ +G+ V Sbjct: 195 YGQGSGVYDHYFNTFLRPTDVLWSSFEVVVVALMIMLVCTYYGYNAHGGPAGVGEAVGRA 254 Query: 350 -----VVQSISIVIIIDSLF 364 VV SI+IVI+ +++ Sbjct: 255 VRASMVVASIAIVIMTLAIY 274 >gi|167970513|ref|ZP_02552790.1| hypothetical integral membrane protein yrbE3B [Mycobacterium tuberculosis H37Ra] gi|215404241|ref|ZP_03416422.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 02_1987] gi|215411647|ref|ZP_03420443.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis 94_M4241A] gi|215427324|ref|ZP_03425243.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T92] gi|215430875|ref|ZP_03428794.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis EAS054] gi|215446168|ref|ZP_03432920.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T85] gi|218753677|ref|ZP_03532473.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis GM 1503] gi|219557919|ref|ZP_03536995.1| integral membrane protein YrbE3b [Mycobacterium tuberculosis T17] gi|254550985|ref|ZP_05141432.1| hypothetical protein Mtube_11071 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289447582|ref|ZP_06437326.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis CPHL_A] gi|298525459|ref|ZP_07012868.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|289420540|gb|EFD17741.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis CPHL_A] gi|298495253|gb|EFI30547.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 258 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 9/248 (3%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV-----PVVILISFVT 178 SQ ++ + +G LL +I QM GV V +V ++ T Sbjct: 1 MGSQMRFFVGTLAGIPDALMHY---RGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTT 57 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A QG Q + G E + + REI V +A G+ A +G+M+IN Sbjct: 58 GAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRIN 117 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 EEIDA+ +G+ + L S R+ A ++ L + +A + A + Y V+ Sbjct: 118 EEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYD 177 Query: 299 SRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVI 358 F++ ++ ++ +A I +V G+A +G+ V V S+ + Sbjct: 178 HYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVAS 237 Query: 359 IIDSLFAI 366 I + + Sbjct: 238 IAILVMTL 245 >gi|291614199|ref|YP_003524356.1| hypothetical protein Slit_1738 [Sideroxydans lithotrophicus ES-1] gi|291584311|gb|ADE11969.1| protein of unknown function DUF140 [Sideroxydans lithotrophicus ES-1] Length = 260 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 2/232 (0%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + + RQ+++ GV + +V + ++GA++ Q + G Sbjct: 27 LLWYAFTHLRVLRIPPVNAVFHRQIFFTGVEALRIVAVFGLLSGALVITQITSLVG--GD 84 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++ ++ +RE+G L A++I RS +AI +E+ MK E+ ++ MG+ L Sbjct: 85 SELTVKILIWTLVREVGPLFAAIIIIARSSAAIASELALMKTRHEMTSLYRMGIPPQDYL 144 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PRI + +++ LTI AI G + + ++ + RF T L+ Sbjct: 145 LVPRIAGVTLAVLGLTIYFQVVAIGGGLAISAMFQNVSYLDQVGRFLQTVKLSEFAVVAF 204 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 K AI ++ G + K V+QS+ V +D++ A Sbjct: 205 KGCLFGLAISTISCYNGMQAQPSVTEVPKVAIKAVLQSLLFVFTLDAVIAYL 256 >gi|54024946|ref|YP_119188.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54016454|dbj|BAD57824.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 295 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 108/280 (38%), Gaps = 7/280 (2%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 Q + + ++ + + + L I+ + +++ + Sbjct: 3 AAPGGQWTTRPSPYRPPGLRWTLRTQRAWDPLEELGFQLRFGIAAVAGVGWALRRYRAQV 62 Query: 154 LSLIRQMY-------YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 +++ + VG PV++++ V GA+I G L G + + ++ Sbjct: 63 VAVFTDLAWGNGRAVIVGGGVAPVLVVMGVVAGAMIGLVGITALDTLGMGPLAGAMSALA 122 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 RE+ L+ AV A ++G + AEIG+M+I EEIDA+ +D + ++S R+ A +++ Sbjct: 123 NPRELAPLIAAVGFAAQAGCRMTAEIGAMRIAEEIDALEAQAIDPIPYVVSTRLLAAVLT 182 Query: 267 LPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI 326 + ++A + + + + F F ++ L+K + Sbjct: 183 VVPTYLIALALGFLTTKLTVTAVHGEAAGSFEHYFQMFVEPRDLVYSLVKVVIFVVIVTG 242 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 V +GF +G + S+ ++ D + + Sbjct: 243 VHAYQGFYATGGPEGVGVASGRAIRASLVLIATADMVLTV 282 >gi|289645181|ref|ZP_06477196.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] gi|289505006|gb|EFD26089.1| protein of unknown function DUF140 [Frankia symbiont of Datisca glomerata] Length = 286 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%) Query: 132 LGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +G G ++ + +G+ S +MY + +L +IA L Sbjct: 38 VGQCGQLLGRLVTTAVRQPRGYWGSTRDEMYAMLRFCWLPCVLAVGGFTFLIANYAYDLL 97 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 S G + + +REI T + +AG G+A+ A++G+ +I EE+DA++ +G+D Sbjct: 98 SLLGGQNRIGTYFVMASIREISPFCTGMAVAGVMGTAMAADLGARRIREELDALKVLGVD 157 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 R+L+ PR+ A+ I TI+ II A + +F+ F S+ T + Sbjct: 158 STRMLVLPRVLAITIMTVAFTIIGGLLGIIMAMTSATVFGTTSVGGYFANFLSSLTTPEL 217 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++K+ IG+V ++G V S +G+ V VV + V +I+ + Sbjct: 218 VGVVVKSTLTGTFIGVVCAQKGLTVRGGSEGVGRAVNEAVVLCFAAVWVINFVL 271 >gi|324999479|ref|ZP_08120591.1| hypothetical protein PseP1_11961 [Pseudonocardia sp. P1] Length = 274 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 103/259 (39%), Gaps = 5/259 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASS----YKFKGFLLSLIRQMYYVGVSGVPVV 171 + + ++D QA G I+ T + S + + + +G S + + Sbjct: 8 RAPLALLDDLGKQAEFYGKSIAWTPKAIKSYKTEQVRLIAEVGMSNGALAVIGGSSI-IT 66 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 I+ G Q LS E +I+ R + ++ +A GS A+ Sbjct: 67 FFITMFAGVTGGVQTFDALSDLQLEALGGFTSAIIAPRLLTPIIGGAALAATVGSGFTAQ 126 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+++EEIDA+ MG+ + L++ R+ A +I++ + +A IG + ++ Sbjct: 127 LGAMRVSEEIDALEVMGVRSLPYLVTTRLVAGMITIIPIFAMAMVGGWIGWKLTQVNFFG 186 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + + ++ + +A + ++ G+ +G V V Sbjct: 187 LSAGTYDHYMTTFLQWEDVLYSFAQGLGIAIVVILIHTYYGYTASGGPAGVGLAVGKAVR 246 Query: 352 QSISIVIIIDSLFAIFYFA 370 S+ V+ ++ + A+ + Sbjct: 247 TSLIAVLAVNLVIAMALYG 265 >gi|118472034|ref|YP_884758.1| hypothetical protein MSMEG_0345 [Mycobacterium smegmatis str. MC2 155] gi|118173321|gb|ABK74217.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 272 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 15/263 (5%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG--------- 167 ++ + Q I + G+ + LIR + +G+ Sbjct: 7 RVRAAWDGIGVQTQFYARAIGSIGDAAMNYR------TELIRLIATMGLGAGALAVVGGT 60 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V +V ++ TGA++A QG Q + G E + + +R I TAV ++ G+ Sbjct: 61 VAIVGFLTMTTGALVAVQGYNQFASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAG 120 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M+INEEIDA+ +G+ V L S R+ A +I + L +A + I + + Sbjct: 121 ATAQLGAMRINEEIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTT 180 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 Y V+ F++ ++ ++ + I +V G+ +G+ V Sbjct: 181 VIYGQGSGVYDHYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPAGVGEAVG 240 Query: 348 TCVVQSISIVIIIDSLFAIFYFA 370 V S+ + I+ + ++ + Sbjct: 241 RAVRTSLIVAAIVVVMISLALYG 263 >gi|158520050|ref|YP_001527920.1| hypothetical protein Dole_0033 [Desulfococcus oleovorans Hxd3] gi|158508876|gb|ABW65843.1| protein of unknown function DUF140 [Desulfococcus oleovorans Hxd3] Length = 258 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 8/257 (3%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLS-LIRQMYYVGVSGVPVVI 172 IG+K + +++ + A I AS K + + ++ Q+Y+ V + ++I Sbjct: 8 IGRKTLAYVDHLQNMAAF---AIDLCAVLLASPLKGRAVVRWGVVEQIYFTAVQALFLII 64 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 +S +TG+++ Q ++F ++ LM IL +REIG ++TA+++ RS +A+ EI Sbjct: 65 PLSLLTGSMMLIQ----FAKFSGQVDLGKLMIILVIREIGPVVTAMLVVLRSATAVTIEI 120 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G M + EID++ G+D +R+L PR + ++ L I+ + AI+G V+ I Sbjct: 121 GYMNVFNEIDSLEMTGIDPLRLLAIPRFVGITSAIVCLFIVFDLVAILGGYGVVRLTTSI 180 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 P F S S T A+I GL+KA I +V + GF + K +T ++ Sbjct: 181 PVGNFLSDIGSAITGADIIVGLVKALCFGVVISVVTLYHGFEAQKRITVIPKITSTAAIE 240 Query: 353 SISIVIIIDSLFAIFYF 369 I+ + + ++ Sbjct: 241 CFFYCIVTNIFISGLFY 257 >gi|296163926|ref|ZP_06846562.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900707|gb|EFG80077.1| integral membrane protein YrbE2a [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 243 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 92/219 (42%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 I Q +++ ++++ +I L++FGA S ++ + Sbjct: 17 RPFQWREFILQGWFLLGVSFLPTVMVAIPLTVLIIFTLNILLAEFGAADVSGAGAALGAV 76 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 ++G L+T +++AG +AI A++G+ I EEIDA+ +G+D + L+ PR+ A I Sbjct: 77 TQLGPLVTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVASTIVAL 136 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 LL ++G + ++ + S L + ++KA G+V Sbjct: 137 LLNGAVISIGLVGGFLFGVYIQNVSAGAYVSTLTLITGLPEVLISIVKATLFGLIAGLVG 196 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 G G + +G V +V ++ + ++ + Sbjct: 197 CYRGLTAGGGAKGVGTAVNETLVLAVVALFAVNVVLTTI 235 >gi|317508277|ref|ZP_07965957.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC BAA-974] gi|316253452|gb|EFV12842.1| hypothetical protein HMPREF9336_02329 [Segniliparus rugosus ATCC BAA-974] Length = 280 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 110/256 (42%), Gaps = 4/256 (1%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCA----SSYKFKGFLLSLIRQMYYVGVSGVPVV 171 + + + + LG + + + I Q +++ Sbjct: 15 RLVAYLFDTVLTSLRTLGRWFMLAFGAFRFLVVDTIRLRHPWKETIHQCWFITSVTAVPA 74 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +L+S G ++ Q Q GA + + +R+ ++ A+++ G +GSAI A+ Sbjct: 75 LLVSVPFGIIVMVQVGNLTQQIGAASLTGAAGGLGVIRQGAPIVAALLLGGAAGSAIAAD 134 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+ I EEIDA+R +G++ + L++PR+ A++ P+L + F + ++ + D Sbjct: 135 LGARTIREEIDAMRVIGINPTQRLVAPRLAAMLFVSPMLCVFIVFITMTAGYLLAVMFQD 194 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + + + F + A L++I+ + K+ F + IVA + G + + V VV Sbjct: 195 VTPGSYLASFGAFAKLSDIYVAIGKSVFFGIVVVIVACQRGLETKFGPRGVAESVNASVV 254 Query: 352 QSISIVIIIDSLFAIF 367 + +++ + Sbjct: 255 LGVLATFVLNVVVTQI 270 >gi|145222147|ref|YP_001132825.1| hypothetical protein Mflv_1555 [Mycobacterium gilvum PYR-GCK] gi|315442586|ref|YP_004075465.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|145214633|gb|ABP44037.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260889|gb|ADT97630.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 280 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 7/252 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV-----SGVPVVILI 174 + ++ QA G K + + G V V + Sbjct: 18 RAVDTVGEQALFYGETFRYVPNAITRYR--KETIRLIAEMSMGTGALVMIGGTVGVAAFM 75 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + +G VIA QG L G E + L + L +R + ++ + +A G+ A++G+ Sbjct: 76 TLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVIAGIALAATIGAGATAQLGA 135 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++ EEIDA+ M + V L+S R+ A +I++ L L+ +A A Sbjct: 136 MRVAEEIDAVEAMAVHAVSYLVSTRLIAGLIAIVPLYALSVLAAFFAARFTTVYINGQSA 195 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 ++ F++ +++ ++A M+ A+ +V G+ +G V V S+ Sbjct: 196 GLYDHYFNTFLVPSDLLWSFLQAIVMSIAVMLVHTYYGYNASGGPVGVGIAVGQAVRTSL 255 Query: 355 SIVIIIDSLFAI 366 +V+ I + ++ Sbjct: 256 IVVVTIVLMISL 267 >gi|326330431|ref|ZP_08196739.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] gi|325951706|gb|EGD43738.1| putative YrbE family protein [Nocardioidaceae bacterium Broad-1] Length = 256 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 1/233 (0%) Query: 132 LGLVISNTGEFCASSYK-FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 +G G ++ K +G+ + +M+Y+ V L +IA + Sbjct: 8 MGEAGRLLGYLVKTAVKEPRGYWTATRDEMFYMLQFCWLPVTLAVGGFSFLIANYAYDLV 67 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 GA LREI T + +AG G+A+ A++G+ KI EE+DA +G+D Sbjct: 68 GLLGAGNRLGTYFVFASLREISPFATGMAVAGVMGTAMTADLGARKIREELDAFTVLGID 127 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +R L+ PR+ A+ + + I+ + + A I F + T+ + Sbjct: 128 AIRTLVLPRVIAITVMMVAFNIVGSLLGMSMAMISATWLGTTSPGAFLGNLLGSMTVPEL 187 Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSL 363 +K + IG+V+ ++G + +G+ V VV S + V + + + Sbjct: 188 VGTTVKCTLIGLFIGVVSAQKGLNAKGGAEGVGRAVNEAVVLSFAAVWVANFI 240 >gi|118463838|ref|YP_884136.1| hypothetical protein MAV_5016 [Mycobacterium avium 104] gi|254776558|ref|ZP_05218074.1| hypothetical protein MaviaA2_18084 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165125|gb|ABK66022.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 289 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 101/257 (39%), Gaps = 7/257 (2%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + G + ++D A G+ +++ + K L + + Sbjct: 7 FRSRFPRAAENLNRYGLAAARGLDDVGQMAWFGGVALAHIPHALSHYR--KETLRLIAQI 64 Query: 160 MYYVGVSGV-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 G V +V ++ +++A QG L G E F+ +++ +R + Sbjct: 65 GMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPV 124 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A ++ + L LA Sbjct: 125 VTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALA 184 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + I Y + F + ++F ++A + + I G+ Sbjct: 185 MIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGYN 244 Query: 335 VGVHSNSLGKKVTTCVV 351 G +G+ V + Sbjct: 245 AGGGPVGVGEAVGRSMR 261 >gi|296171120|ref|ZP_06852573.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894376|gb|EFG74129.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 284 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 7/258 (2%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 + ++ N +Q ++ +K + + + G Sbjct: 10 RAWPAEAAGRVAAGWNRVGAQVKFYATAVTEMRTAFLRY--WKEIIRLVAQMSLGTGALA 67 Query: 168 V-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 V +V ++ TGAVIA QG QLS G E + + + + +R I + V +A Sbjct: 68 VIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAGVGLAA 127 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 G+ A++G+M+I +EIDA+ M + V L+S R+ A ++ + L +A A A Sbjct: 128 TIGAGATAQLGAMRIADEIDALEVMAVRSVAYLVSTRVAAGVVVVIPLYCVAVVCAFQAA 187 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 Y V+ F + ++ + A A+ +V G+ + Sbjct: 188 RFGTTGIYGQSTGVYDHYFRTFLNSIDLLWSFVTVIAAAIAVMLVHTYYGYNASGGPAGV 247 Query: 343 GKKVTTCVVQSISIVIII 360 G+ V V S+ ++ +I Sbjct: 248 GRAVGHSVRTSLIVLTLI 265 >gi|254822927|ref|ZP_05227928.1| hypothetical protein MintA_23569 [Mycobacterium intracellulare ATCC 13950] Length = 289 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 101/257 (39%), Gaps = 7/257 (2%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + G + ++D A G+ +++ + K L + + Sbjct: 7 FRSRFPRAAENLNRYGLAAARGLDDIGQMAWFGGVALAHIPHALRNYR--KETLRLVAQI 64 Query: 160 MYYVGVSGV-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 G V +V ++ +++A QG L G E F+ +++ +R + Sbjct: 65 GMGTGAMAVIGGTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPV 124 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 +T + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A ++ + L LA Sbjct: 125 VTGIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALA 184 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + + I Y + F + ++F ++A + + I G+ Sbjct: 185 MIMSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAILITAVVMITHCFYGYN 244 Query: 335 VGVHSNSLGKKVTTCVV 351 G +G+ V + Sbjct: 245 AGGGPVGVGEAVGRSMR 261 >gi|289554258|ref|ZP_06443468.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 605] gi|289438890|gb|EFD21383.1| hypothetical membrane protein yrbE3B [Mycobacterium tuberculosis KZN 605] Length = 247 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 88/201 (43%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V +V ++ TGA++A QG Q + G E + + REI V +A G Sbjct: 34 GTVAIVGFLAMTTGAIVAVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVG 93 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A +G+M+INEEIDA+ +G+ + L S R+ A ++ L + +A + A + Sbjct: 94 AGTTAALGAMRINEEIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVG 153 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 Y V+ F++ ++ ++ +A I +V G+A +G+ Sbjct: 154 TTAIYGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEA 213 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ + I + + Sbjct: 214 VGRAVRASMVVASIAILVMTL 234 >gi|260186936|ref|ZP_05764410.1| hypothetical protein MtubCP_13018 [Mycobacterium tuberculosis CPHL_A] Length = 254 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGV-----PVVILISFVTGAVI 182 ++ + +G LL +I QM GV V +V ++ TGA++ Sbjct: 1 MRFFVGTLAGIPDALMHY---RGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIV 57 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 A QG Q + G E + + REI V +A G+ A +G+M+INEEID Sbjct: 58 AVQGYNQFASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEEID 117 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 A+ +G+ + L S R+ A ++ L + +A + A + Y V+ F+ Sbjct: 118 ALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIYGQGSGVYDHYFN 177 Query: 303 STATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 + ++ ++ +A I +V G+A +G+ V V S+ + I Sbjct: 178 TFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPAGVGEAVGRAVRASMVVASIAIL 237 Query: 363 LFAI 366 + + Sbjct: 238 VMTL 241 >gi|296165084|ref|ZP_06847637.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899577|gb|EFG79030.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 289 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 6/237 (2%) Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM-YYVGVSGVP-----VVILISF 176 ++ +S G+ + ++++ LL ++ QM G V +V I+ Sbjct: 27 RPLVEIGQMVWFALSAIGQIPFAVHRYRKELLRMVAQMGMGTGAMAVVGGTAAIVGFITL 86 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G+++A QG L G E F+ L +++ +R + + +A G+ AE+G+M+ Sbjct: 87 SAGSLVAIQGYATLGNIGVEAFTGFLAALVNVRFVAPVAAGQALAATVGAGATAELGAMR 146 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 I+EEIDA+ M + V L S R+ A +I + L LA A + + Y Sbjct: 147 ISEEIDALEVMSIRSVPFLASTRVVAGLIVIIPLYGLAMTMAFLSQQVTTVLLYGQSIGT 206 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + FH+ L ++ + +A + G+ +G+ V + S Sbjct: 207 YNHYFHTFLRLNDVGWSFAEVILVAVVVMTTHCYYGYTATGGPVGVGEAVGRSMRLS 263 >gi|240168188|ref|ZP_04746847.1| hypothetical protein MkanA1_02657 [Mycobacterium kansasii ATCC 12478] Length = 272 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 13/270 (4%) Query: 111 HYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPV 170 G V+ ++ + A + + G + +++ L LI Q+ +G + V Sbjct: 1 MNRYGGAAVRGLDTTGRLAWF---TLVSLGNVPFALSRYRKETLRLIAQI-GMGTGAMAV 56 Query: 171 VILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V + + G V +A QG L G E F+ +++ +R ++T V +A Sbjct: 57 VGGTAAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGVAMAAT 116 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 G+ AE+G+M+I+EEIDA+ MG+ V L + RI A + + L +A A + Sbjct: 117 VGAGATAELGAMRISEEIDALEVMGIKSVCFLATTRILAGLTVIIPLYAMAMIMAFLSPQ 176 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 I Y + F + ++F ++A + + + G++ G +G Sbjct: 177 ITTTVLYGQSTGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMVSHCYYGYSAGGGPVGVG 236 Query: 344 KKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + V + S+ + ++ + + G+ Sbjct: 237 EAVGRSMRFSLVSIPVV--VLSAALALYGV 264 >gi|54027027|ref|YP_121269.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54018535|dbj|BAD59905.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 287 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 94/249 (37%), Gaps = 14/249 (5%) Query: 134 LVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS---------GVPVVILISFVTGAVIAQ 184 I+ A + K + ++R VG + VV+++ G + Sbjct: 33 QAITFFQALGAVPFVLKHYRKEVLRLTADVGWGNGSLVVGGGTIGVVVILCAFGGITVGM 92 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + L+ + + RE+ +L + A ++G A++GSM+I+EEIDA+ Sbjct: 93 ESFNALNLLTMGPLTGAISGFATTRELAPILATLAFAIQAGCRFTAQLGSMRISEEIDAL 152 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 ++ + + L+S R+ A +++ L + +A + + + + F Sbjct: 153 ESIAIRPLPYLVSTRMIAATLTIVPLYTIGLATAYLATKLSVLFLGGTSAGTYDHYFFQF 212 Query: 305 ATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++F L+K + G+ +G I +VI++ +F Sbjct: 213 LIGTDVFFSLLKVVIFVLLATFIQCYYGYVATGGPEGVGVAAGRA----IKMVIVV-MVF 267 Query: 365 AIFYFAIGI 373 A + + I Sbjct: 268 ANLFLTLAI 276 >gi|108797097|ref|YP_637294.1| hypothetical protein Mmcs_0117 [Mycobacterium sp. MCS] gi|119866182|ref|YP_936134.1| hypothetical protein Mkms_0126 [Mycobacterium sp. KMS] gi|108767516|gb|ABG06238.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692271|gb|ABL89344.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] Length = 296 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 105/261 (40%), Gaps = 1/261 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + Y + L + + + + +G + + + + Sbjct: 15 RQRFPRGYARAEKLVAAPSRGLDSVGHVAWFVVTAVGSIGHALRYYRKEVLRLIAEIGMG 74 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M +G V +V ++ G++IA QG L G E F+ +++ +R +++ Sbjct: 75 TGAMAVIG-GTVAIVGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALVNVRIAAPVVS 133 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +A G+ AE+G+M+I+EEIDA+ MG+ + L+S RI A I + L +A Sbjct: 134 GQALAATVGAGATAELGAMRISEEIDALEVMGIKSISYLVSTRIMAGFIVIIPLYAMAII 193 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + A + +Y + F + ++ ++A ++ + I G+ Sbjct: 194 MSFLSAQVTTTLFYGQSTGTYEHYFRTFLRPDDVAWSFVQAIIISIIVMINHCYYGYYAS 253 Query: 337 VHSNSLGKKVTTCVVQSISIV 357 +G+ V + S+ + Sbjct: 254 GGPVGVGEAVGRSMRASLIAI 274 >gi|118616794|ref|YP_905126.1| integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] gi|118568904|gb|ABL03655.1| conserved hypothetical integral membrane protein YrbE1B [Mycobacterium ulcerans Agy99] Length = 289 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 7/254 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + + + +++S A + + +G K L + + Sbjct: 10 RFPRAIANFNRYAGSVTRGLDESGRLAWFILTSLGQSGHALRYYR--KEILRLIAQIGMG 67 Query: 163 VGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 G V +V ++ ++IA QG L G E F+ +++ +R G ++T Sbjct: 68 TGAMAVVGGTAAIVGFVTLSGSSLIAIQGFASLGNIGVEAFTGFFSALVNVRIAGPVVTG 127 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 128 VALAATVGAGATAELGAMRISEEIDALEVMGIQSISYLASTRIMAGLVVIIPLYALAMIM 187 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + +V Y + F + ++F ++A +A + + G+ G Sbjct: 188 SFFSPQMVTTVLYGQSSGTYEHYFRTFLRPDDVFWSFLEAIIIAAIVMVTHCYYGYNAGG 247 Query: 338 HSNSLGKKVTTCVV 351 G+ V + Sbjct: 248 GPVGEGEAVGRSMR 261 >gi|330875108|gb|EGH09257.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea str. race 4] Length = 148 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 79/146 (54%), Gaps = 1/146 (0%) Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 SA+ AEIG+MK E++ ++ +G+D ++ +++PR+WA IS+P+L ++ + I GAS V Sbjct: 1 SALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISMPILAMIFSVVGIWGASWV 60 Query: 286 IWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGK 344 + + F+S ++ + ++ G+IK+ A + +A+ +G+ S + + Sbjct: 61 AIDWLGVYDGSFWSNMQNSVSFTNDVLNGVIKSVVFAFVVTWIAVFQGYDCEPTSEGISR 120 Query: 345 KVTTCVVQSISIVIIIDSLFAIFYFA 370 T VV + V+ +D + F Sbjct: 121 ATTRTVVYASLAVLGLDFILTALMFG 146 >gi|120405065|ref|YP_954894.1| hypothetical protein Mvan_4111 [Mycobacterium vanbaalenii PYR-1] gi|119957883|gb|ABM14888.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 281 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 92/232 (39%), Gaps = 10/232 (4%) Query: 128 QAHILGLVISNTGEFCASSY-KFKGFLLSLIRQMYYVGVSG---------VPVVILISFV 177 +G + A + + ++R + + + + +V ++ Sbjct: 20 VLGRIGDMALFYARAAAGVPYALRFYRRDILRLIAEISMGAGTLAMIGGTLVIVGFLTLA 79 Query: 178 TGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKI 237 TG +A QG L G E + L + + +R ++ + +A G+ + A++G+M+ Sbjct: 80 TGGTLAVQGYSSLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRT 139 Query: 238 NEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVF 297 NEEIDA+ M + + L+S R+ A ++++ L +A + + + ++ Sbjct: 140 NEEIDALEAMAIRPISFLVSTRLIAGMVAITPLYSVAVILSFLASRYTTVVLLGQSAGLY 199 Query: 298 FSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 F + + ++ +A MA AI ++ G+ +G Sbjct: 200 DHYFATFLSPIDLLWSFAQAVLMAVAILLIHTYFGYNATGGPAGVGVATGDA 251 >gi|169628783|ref|YP_001702432.1| hypothetical protein MAB_1693 [Mycobacterium abscessus ATCC 19977] gi|169240750|emb|CAM61778.1| Conserved hypothetical protein (YrbE family?) [Mycobacterium abscessus] Length = 289 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 104/236 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F A + +RQ ++ + V +L++ G ++ Q A Q GA Sbjct: 48 VHTLRYFVADLVMGRFQWAEFVRQAAFMAGTAVMPTVLVALPIGVTLSIQFALLAGQVGA 107 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ A+++A GSA+ A++G + EE A+ MG+ VR L Sbjct: 108 TSLAGAASGLAVVRQAASLVAAMLLASAVGSAMTADLGCRTMREETAAMEVMGVSVVRRL 167 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR A I+ LT + F + + + F S F S AT A++ L Sbjct: 168 VVPRFAAAIVIGIALTGVVCFVGFLASYLFNVFVQGGAPGSFVSTFASFATPADLLLALF 227 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 KA + ++A ++G A + V VV+S+ +++I++ + + Y + Sbjct: 228 KAAAYGAIVAVIACQKGLAAHGGPTGVANSVNAAVVESVLLLMIVNVVVSQVYTML 283 >gi|118466059|ref|YP_881723.1| TrnB2 protein [Mycobacterium avium 104] gi|118167346|gb|ABK68243.1| TrnB2 protein [Mycobacterium avium 104] Length = 294 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 13/290 (4%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 +P ++V N SQ +S + A ++K Sbjct: 3 AAPARHRPMSVIPAPPRLARLSITLHRLVAGWNRLGSQTAFYVKALSLMWDAVA---RYK 59 Query: 151 GFLLSLIRQMYYVGVSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLM 203 L LI M +GV + V+ + TG+ I Q LS G E S Sbjct: 60 AETLRLIATM-SLGVGALAVIGGTVVVVTTLVMSTGSFIGIQLYRSLSDVGVEALSGFAS 118 Query: 204 SILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWAL 263 + L R L +A+ +A G+ A++G+M+INEEIDA+ MG+ + L S RI A Sbjct: 119 AYLNTRFAAPLTSAIGLAATIGAGATAQLGAMRINEEIDALEVMGIRAISYLASTRIVAG 178 Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 ++ L L++ + + ++ + V+ F++ ++ L++ A Sbjct: 179 VLVTVPLWCLSSLAGYLATRTLVVVAFGQAPGVYDHYFNTYLQPTDLIWSLLQVMATATV 238 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 + +V GF +G+ V V S +V+ + A+ A G+ Sbjct: 239 VMLVHTYYGFNATGGPAGVGEAVGRSVRAS--LVVAVTVQLAVAMAAYGV 286 >gi|254458766|ref|ZP_05072190.1| ABC transporter permease protein [Campylobacterales bacterium GD 1] gi|207084532|gb|EDZ61820.1| ABC transporter permease protein [Campylobacterales bacterium GD 1] Length = 262 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 108/265 (40%), Gaps = 4/265 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 IG K + ++ L + + + + + + L +Q+Y+ V Sbjct: 2 VLRFIEGIGDKTISMMSSFYEALRFTSLCLLHMIQPSSYNPAMRMVLT---KQIYFTTVQ 58 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+ + ++ + G+VI +Q+ + ++ + E TA++I+ RSG+ Sbjct: 59 IIPLFMTMAILFGSVIIGVVIALATQYNLQDEIGSIIITFVIDEFSPFFTALLISLRSGA 118 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ EI M +N+E++ + +D + L PRI + +IS L+IL + I Sbjct: 119 AVNTEIAVMNVNKELNTLEKYKIDLIDYLFLPRIISGMISAVSLSILFAVIMLSSGYIFT 178 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKV 346 Y ++ F + S ++ LIK+ ++ + G ++ V Sbjct: 179 LFYMNMDFHTYKYILISAIEFKDLVVLLIKSMAFGFVTMLIPIYSGLKTTSAYTAIPVSV 238 Query: 347 TTCVVQSISIVIIIDSLFAIFYFAI 371 +V+ + I+ + ++ ++ Sbjct: 239 LNGMVKLFIALFFIE-VLSLLLQSL 262 >gi|296167381|ref|ZP_06849783.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897325|gb|EFG76929.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 289 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 1/255 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + G+ + + A LG + + + + + Sbjct: 8 RARFPRAAENLNRYGGAAGRGLDDVGQMAWFGAVALGHIPHALRNYRKETLRLIAQIGMG 67 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M +G V +V ++ +++A QG L G E F+ +++ +R ++T Sbjct: 68 TGAMAVIG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVT 126 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 + +A G+ AE+G+M+I+EEIDA+ MG+ + L + RI A ++ + L LA Sbjct: 127 GIAMAATVGAGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALAMI 186 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + + I Y + F + ++F ++A + + I G+ G Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGYNAG 246 Query: 337 VHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 247 GGPVGVGEAVGRSMR 261 >gi|225712538|gb|ACO12115.1| UPF0393 membrane protein RBE_1340 [Lepeophtheirus salmonis] Length = 215 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 1/199 (0%) Query: 126 CSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQ 185 + +G + + + K K + +I +MY +G+ +P V +S GA++ Q Sbjct: 1 MNIIEHVGKYTTLVYQALQPAEKKKVYYQQIIYEMYELGIKSIPFVAFVSIFVGAILTLQ 60 Query: 186 GAFQLSQFGAEIF-SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAI 244 + + + + E + ++++AG+ GS I + IG+M++ E+IDA+ Sbjct: 61 TSANIKNPLIPKYLVGFATRESIMVEFSPTIISLLLAGKIGSNIASGIGTMRVTEQIDAL 120 Query: 245 RTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHST 304 MG++ LI P+I AL++ P + L+ + G + + F Sbjct: 121 EIMGVNSAGYLIYPKIVALMLINPFIISLSIIIGVGGGWLAALMTGSTTYVQFIEGIQWD 180 Query: 305 ATLANIFTGLIKAPFMACA 323 + ++K A Sbjct: 181 FNMMKYIYAMVKTILFAFL 199 >gi|54023080|ref|YP_117322.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014588|dbj|BAD55958.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 281 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 117/273 (42%), Gaps = 5/273 (1%) Query: 96 QKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNT-GEFCASSYKFKGFLL 154 + + + ++ + + +V + I ++ T G+ ++++ LL Sbjct: 3 PEIRTADRVSATAIVRKNFSDTVVSSLRTFGRAVGIAQESVTGTVGDLIRREFQWREALL 62 Query: 155 SLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVL 214 R + V + L++ G +++ Q + GA+ + +++ + Sbjct: 63 QAWRLVTVTAVPAI----LMAVPFGVIVSIQVGNLIHTLGADSLVGATGGLGVIKQGAPM 118 Query: 215 LTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILA 274 T ++ G +AI A++G+ I EEIDA+ TMG+ + L+ PR+ A++I PLL +L Sbjct: 119 ATGFLLGGAGAAAIAADLGARTIREEIDALHTMGISPIHRLVIPRMVAMLIVAPLLNVLV 178 Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 F ++ V D+ +++ F S + A+++ L KA + I+A + G Sbjct: 179 IFVGVLAGYAVAIGGQDVTPGSYWATFGSFTSTADVWVSLGKALIFGFLVVIIACQRGLE 238 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + V VV S+ ++ ++ L Sbjct: 239 AKGGPRGVADAVNAAVVLSVVSIVCVNLLLTQV 271 >gi|226364206|ref|YP_002781988.1| YrbE family protein [Rhodococcus opacus B4] gi|226242695|dbj|BAH53043.1| putative YrbE family protein [Rhodococcus opacus B4] Length = 283 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 109/266 (40%), Gaps = 1/266 (0%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + + I + + A +G + + + + + Sbjct: 6 AGRFPRTRRRFASASRSIDRLGEQALFFARAIGSAPRALVHYRRETLRLIAEISMGTGAL 65 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G V +V ++ TG IA QG L G E + + + +R ++ + + Sbjct: 66 AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A G+ A++G+M+++EEIDA+ TM + + L+S R+ A +I++ L LA ++ + Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + YD V+ F + +I +A MA AI ++ GF Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGPV 244 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V S+ V+ + L ++ Sbjct: 245 GVGVAVGNAVRSSLIAVVTVTLLISL 270 >gi|226304400|ref|YP_002764358.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494174|ref|ZP_04387937.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226183515|dbj|BAH31619.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318536|gb|EEN84394.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 285 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 106/260 (40%), Gaps = 10/260 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYV---------GVSGVPVV 171 + + LG ++ AS + + ++ Q+ V G + +V Sbjct: 17 LRTAGDGLVSLGQHVTFYVRTIASIPFALTKYRKHVLGQISEVSFGTNSLLSGGGTIGIV 76 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 +S ++ + L G S L ++ RE+ ++ A+ +A + G+ A+ Sbjct: 77 FAMSLAAAMMLGVETHRGLELVGMTSLSGMLSAVANTRELAPVVVAIALAAKVGTGFTAQ 136 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 IG+M+I++EIDA+ +M + + L R+ A +I + + ++ ++ + +V+ + Sbjct: 137 IGAMRISDEIDALDSMAIRSIPFLAGTRVIAAMICVIPIYMIGLLASYLSTRLVVVFFNG 196 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + FH + ++ +KA A + +V G+ +G+ + Sbjct: 197 ASAGTYDYFFHLAISPQDLLYSGLKAVVFAAVVALVHCAYGYYASGGPAGVGQAAGRALR 256 Query: 352 QSISIVIIIDSLFAIFYFAI 371 +I + I+D L + + Sbjct: 257 TAILAIGILDVLMTFALWGL 276 >gi|118470891|ref|YP_884757.1| hypothetical protein MSMEG_0344 [Mycobacterium smegmatis str. MC2 155] gi|118172178|gb|ABK73074.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 256 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 103/239 (43%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG + T + + + + Q ++V + ++++ ++ Sbjct: 11 VGALGGFFAMTLDVFITIARPPFAWREYLNQTWFVARVSLVPALMLTVPYTVLLVFTFNI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS +I + +IG ++T +++AG +A+ A++G+ I EE+DA+R MG Sbjct: 71 LLIEFGAADFSGTGAAIGTVSQIGPIVTVLVVAGAGSTAMCADLGARTIREELDAMRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D ++ L+ PR+ A L+ + G + +P F + A Sbjct: 131 IDPIQALVVPRVLAATTVALALSATVIIVGLAGGFVFAVFIQHVPPGSFVAGLTVLTHGA 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 ++ L KA + G++A +G +VG +G V VV + + I+ + Sbjct: 191 DVAVALAKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALFAINVIATAV 249 >gi|83584337|gb|ABC24943.1| plastid permease-like protein [Prototheca wickerhamii] Length = 248 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 81/155 (52%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + G+ + K + + Q+ VG + V +L SF G V Q + ++ G Sbjct: 94 LVIAGQSIWRICQGKIHWRNTLEQLNLVGPRSLGVCLLTSFFLGMVFTIQFIREFTRLGL 153 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 ++ + RE+ ++T++++AGR GSA AE+G+M+++E+ D++R +G D + L Sbjct: 154 TRTVGGVLGLALARELTPVVTSIIVAGRVGSAFAAELGTMQVSEQTDSLRVLGSDPIDYL 213 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 I+PRI A +I+ PLL I+ + ++ Y Sbjct: 214 ITPRILACMIATPLLNIMCLCMGFAASMLLAEAAY 248 >gi|120401161|ref|YP_950990.1| hypothetical protein Mvan_0133 [Mycobacterium vanbaalenii PYR-1] gi|119953979|gb|ABM10984.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 289 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 96/236 (40%), Gaps = 1/236 (0%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + + + +G + + + + M VG V +V ++ Sbjct: 27 RGLEAMGHVAVFVVTAVGSIGHALRFYRREMLRLIAEIGMGTGAMAVVG-GTVAIVGFVT 85 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 +++A QG L G E F+ +++ +R ++ +A G+ AE+G+M Sbjct: 86 LSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVAGQALAATVGAGATAELGAM 145 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 +I+EEIDA+ MG+ + L+S RI A + + L +A + + A + +Y Sbjct: 146 RISEEIDALEVMGIKSISYLVSTRIMAGFVVIIPLYAMAIIMSFLSAQVTTTVFYGQSVG 205 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 + F + ++F I+A ++ + + GF +G+ V + Sbjct: 206 TYEHYFRTFLRPDDVFWSFIQAVIISVIVMLNHCYYGFYASGGPVGVGEAVGRSMR 261 >gi|108761681|ref|YP_632089.1| hypothetical protein MXAN_3909 [Myxococcus xanthus DK 1622] gi|108465561|gb|ABF90746.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 257 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 114/262 (43%), Gaps = 9/262 (3%) Query: 109 NLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV 168 L +G+ + + + + ++G + K L R + G + Sbjct: 2 ALLTRLGRTALDALRGTGALGLVVGRTVLAL---------PKLERRELGRALVQFGYGSL 52 Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 P+ + + + G ++ Q + +FGA F L E G LL ++++ R G+ Sbjct: 53 PLALATAALAGIIVVLQSGIYVQRFGARAFLGWAAGYGVLWEFGPLLLGLIMSARLGARN 112 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 AE+ M++ +I+ +R +GLD IL++PR+ A+ +S+ L+ + AI+ S+ Sbjct: 113 AAELALMQVGGQIEGLRGIGLDPFAILVAPRVVAMEVSMLALSGVTFAVAILFESVAALL 172 Query: 289 YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTT 348 +P VFF F ++ G++K AI +++ G + ++++G+ Sbjct: 173 ALGLPVRVFFGTFSQLLGPLDLLGGVVKTGIFGLAIALLSTTVGLSARGGAHAVGQAAAN 232 Query: 349 CVVQSISIVIIIDSLFAIFYFA 370 VV+S + + ++D Sbjct: 233 AVVRSCAAIFVLDFALTSLLAG 254 >gi|119867718|ref|YP_937670.1| hypothetical protein Mkms_1677 [Mycobacterium sp. KMS] gi|120401521|ref|YP_951350.1| hypothetical protein Mvan_0499 [Mycobacterium vanbaalenii PYR-1] gi|126434219|ref|YP_001069910.1| hypothetical protein Mjls_1626 [Mycobacterium sp. JLS] gi|145221252|ref|YP_001131930.1| hypothetical protein Mflv_0653 [Mycobacterium gilvum PYR-GCK] gi|315441853|ref|YP_004074732.1| ABC-type transporter involved in resistance to organic solvents, permease [Mycobacterium sp. Spyr1] gi|49072909|gb|AAT51760.1| TrnB2 [Mycobacterium vanbaalenii PYR-1] gi|119693807|gb|ABL90880.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|119954339|gb|ABM11344.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] gi|126234019|gb|ABN97419.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] gi|145213738|gb|ABP43142.1| protein of unknown function DUF140 [Mycobacterium gilvum PYR-GCK] gi|315260156|gb|ADT96897.1| ABC-type transport system involved in resistance to organic solvents, permease component [Mycobacterium sp. Spyr1] Length = 285 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 15/244 (6%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVI 172 D QA G IS+T + + ++RQ+ +G+ V VV Sbjct: 25 WRDLGDQARFYGQSISSTVQAATTYR------AEVLRQIAAIGLGAGSLAVVGGTVAVVA 78 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ T A +A Q Q+SQ G E + + + +R +A A G+ A++ Sbjct: 79 FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 G+MKINEEIDA+ MG+ + L S R+ A +I + L +A + ++ +Y Sbjct: 139 GAMKINEEIDALAVMGIRPIAYLASTRLLAGVIVVVPLYCVALLMSFFSVRVITTAFYGQ 198 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 VF F + +F A I ++ G +G+ V Sbjct: 199 GSGVFDHYFDTFLNPQAVFFSFAVTVAAALVIMLIHTYYGLNATGGPAGVGEAVGRATRT 258 Query: 353 SISI 356 S+ Sbjct: 259 SLIA 262 >gi|111021669|ref|YP_704641.1| hypothetical protein RHA1_ro04697 [Rhodococcus jostii RHA1] gi|110821199|gb|ABG96483.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 283 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 109/266 (40%), Gaps = 1/266 (0%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + + I + + A +G + + + + + Sbjct: 6 AGRFPRTRKRFASASRSIDRLGEQALFFARAIGWAPRALMHYPKETLRLIAEISMGTGAL 65 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G V +V ++ TG IA QG L G E + + + +R ++ + + Sbjct: 66 AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A G+ A++G+M+++EEIDA+ TM + + L+S R+ A +I++ L LA ++ + Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYALAVIASFM 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + YD V+ F + +I +A MA AI ++ GF Sbjct: 185 ASRFATVVLYDQSSGVYDHYFSTFLIPTDILWSFAQAIVMAIAIMLIHTYYGFNASGGPV 244 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V S+ V+ + L ++ Sbjct: 245 GVGVAVGNAVRSSLIAVVTVTLLISL 270 >gi|15828392|ref|NP_302655.1| hypothetical protein ML2588 [Mycobacterium leprae TN] gi|221230869|ref|YP_002504285.1| hypothetical protein MLBr_02588 [Mycobacterium leprae Br4923] gi|13093822|emb|CAC32120.1| conserved membrane protein [Mycobacterium leprae] gi|219933976|emb|CAR72688.1| conserved membrane protein [Mycobacterium leprae Br4923] Length = 289 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 11/256 (4%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + G + I+D + + G + +++ L LI Q+ Sbjct: 10 RFPRAAANLNRYGGAAARGIDDIGQMSWFG---LIALGNIPNALSRYRKETLRLIAQI-G 65 Query: 163 VGVSGVPVVILISFVTGAV-------IAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +G + VV + + G V +A QG L G E F+ +++ +R ++ Sbjct: 66 MGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVI 125 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 T +++A G+ AE+G+M+I+EEIDA+ M + + L++ RI A ++ + L +A Sbjct: 126 TGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAM 185 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A + I+ Y + F + ++F ++A + + I G+ Sbjct: 186 IMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYGYTA 245 Query: 336 GVHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 246 NGGPVGVGEAVGRSMR 261 >gi|118467026|ref|YP_884172.1| ABC transporter transmembrane protein [Mycobacterium avium 104] gi|118168313|gb|ABK69210.1| ABC transporter integral membrane protein [Mycobacterium avium 104] Length = 235 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 99/219 (45%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 + +I Q + + +L++ GA++A Q + +++ GA + L Sbjct: 7 LRLPFGEVIVQAWTLLKVTALPAVLMAIPFGAMVAVQLSGLVNEVGANSLVGSATGVAVL 66 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 R+ + +++ G + SAI ++ G+ I EE+DA++T+G+D VR L+ PR L++ P Sbjct: 67 RQGAPVTAGLLMGGAAASAIASDFGARAIREELDALKTLGIDPVRRLVVPRFLGLLLITP 126 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L ++ + A ++ + F+ F S A + +++ + K A + +++ Sbjct: 127 SLVVIVIAMGVGAAFVIATVVNGVTPGSFWLSFGSFAKMVDLWFTMGKGFIFAGIVAVIS 186 Query: 329 MKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + G + V VV ++ +++++ Sbjct: 187 SQRGMEAKGGPRGVADAVNASVVLNVIFIVVVNLAITQL 225 >gi|226304448|ref|YP_002764406.1| YrbE family protein [Rhodococcus erythropolis PR4] gi|229494442|ref|ZP_04388205.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] gi|226183563|dbj|BAH31667.1| putative YrbE family protein [Rhodococcus erythropolis PR4] gi|229318804|gb|EEN84662.1| ABC-transporter integral membrane protein [Rhodococcus erythropolis SK121] Length = 283 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 1/266 (0%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + + + I + I + + A LG + + + + + Sbjct: 6 AGRFPRTRRQIGSISRSIDSIGDQALFFAKALGHAPKALMRYPRETLRLIAEISMGTGAL 65 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 +G V +V ++ TG IA QG L G E + + + +R ++ + + Sbjct: 66 AVIG-GTVVIVGFLTLFTGGTIAVQGYSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGL 124 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A G+ A++G+M+++EEIDA+ TM + + L+S R+ A +I++ L LA ++ + Sbjct: 125 AATIGAGSTAQLGAMRVSEEIDALETMAIPSIPYLVSTRVMAGMIAIIPLYSLAVIASFV 184 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + Y+ V+ F + +I +A MA A+ ++ GF Sbjct: 185 ASRFATVFLYNQSGGVYDHYFTTFLIPTDILWSFAQAIVMALAVMLIHTYYGFNATGGPV 244 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAI 366 +G V V S+ V+ + L ++ Sbjct: 245 GVGVAVGNAVRASLIAVVTVTLLISL 270 >gi|240170712|ref|ZP_04749371.1| hypothetical protein MkanA1_15460 [Mycobacterium kansasii ATCC 12478] Length = 284 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 9/263 (3%) Query: 105 NSFKNLHYHIGKK--IVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + L + G+ +V N Q I+ K L + + Sbjct: 5 PPAERLAWIGGRASGLVAGWNRVGIQVAFYARTIAEMRTAFGRYG--KEILRLIAQMSLG 62 Query: 163 VGVSGV-----PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTA 217 G V +V ++ TGAVIA QG QLS G E + + + + +R I + Sbjct: 63 TGALAVIGGTVVIVGFLTLSTGAVIAVQGYNQLSGIGVEAMTGFISAYVNVRIISPAVAG 122 Query: 218 VMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 V +A G+ A++G+M+I EEIDA+ M + V L+S R+ A ++ + L +A Sbjct: 123 VGLAATIGAGATAQLGAMRIAEEIDALEVMAVRSVAYLVSTRVVAGVVVVIPLYCIAVVC 182 Query: 278 AIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 A A Y V+ F + ++ + A AI +V G+ Sbjct: 183 AFQAARFGTTGVYGQSTGVYDHYFRTFLNSTDLLWSFLTVIAAAIAIMLVHTHYGYTAKG 242 Query: 338 HSNSLGKKVTTCVVQSISIVIII 360 +G V V S+ ++ +I Sbjct: 243 GPAGVGAAVGHSVRTSLIVLTLI 265 >gi|118618293|ref|YP_906625.1| integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99] gi|118570403|gb|ABL05154.1| conserved hypothetical integral membrane protein, Yrb3B [Mycobacterium ulcerans Agy99] Length = 230 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V +V + TGA++A QG Q + G E + + REI V +A G Sbjct: 17 GTVVIVGFLGMTTGAIVAVQGYNQFASVGVEALTGFASAFFNAREIQPGTVMVALAATVG 76 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+INEEIDA+ +G+ V L S R+ A ++ L + +A + A Sbjct: 77 AGATAQLGAMRINEEIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAG 136 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 Y V+ F++ ++ + +A I +V G+ +G+ Sbjct: 137 TTAIYGQGSGVYDHYFNTFLRPTDVLWSSFEVVVLALMIMLVCTYYGYNAHGGPAGVGEA 196 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ + I + + Sbjct: 197 VGRAVRASMVVASIAIVIMTL 217 >gi|254819937|ref|ZP_05224938.1| TrnB2 protein [Mycobacterium intracellulare ATCC 13950] Length = 282 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 111/278 (39%), Gaps = 13/278 (4%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 ++V N SQ +S + A ++K L LI M Sbjct: 3 PAPPRLARLSITLHRLVAGWNRLGSQTAFYVKALSLVWDAVA---RYKAETLRLIATM-S 58 Query: 163 VGVSGVPVVI-------LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 +G+ + ++ + TGA I Q LS G E S + L R L Sbjct: 59 LGIGALAIIGGTVVVVTTLVMSTGAFIGIQLYRSLSDVGVEALSGFASAYLNTRFAAPLT 118 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 +A+ +A G+ A++G+M+INEEIDA+ MG+ + L S RI A ++ L L++ Sbjct: 119 SAIGLAATIGAGATAQLGAMRINEEIDALEVMGIRAISYLASTRIVAGVLVTVPLWCLSS 178 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + + ++ + V+ F++ ++ L++ A + +V GF Sbjct: 179 LAGYLATRTLVVVAFGQAPGVYDHYFNTYLQPTDLIWSLLQVIATATVVMLVHTYYGFNA 238 Query: 336 GVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 +G+ V V S +V+ + A+ A G+ Sbjct: 239 TGGPAGVGEAVGRSVRAS--LVVAVTVQLAVAMAAYGV 274 >gi|224369539|ref|YP_002603703.1| ABC-type transport system involved in resitance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] gi|223692256|gb|ACN15539.1| ABC-type transport system involved in resitance to organic solvents, permease protein [Desulfobacterium autotrophicum HRM2] Length = 278 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 106/269 (39%), Gaps = 10/269 (3%) Query: 105 NSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVG 164 N L +GK F++ + + + + + + + RQ+ G Sbjct: 14 NPLWRLLGALGKSTTAFVSMAVYLTAL---AFTILVQATKPRHWRRTVRKAFSRQLLETG 70 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 + + V L++ G ++ Q L + G + L ++ +RE+ LLT +++ ++ Sbjct: 71 IKTIIPVGLVALFIGVLVVMQAQLWLGKLGQTEWLGPLFVVVVVRELAPLLTNLIMILQN 130 Query: 225 GSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASI 284 GS + +E+ M ++ ++ + G+D + LI PR+ A ++S LT+L +++ + Sbjct: 131 GSKMTSELAGMTVSGKVRMLDAQGIDPLIYLILPRVTATVVSTFCLTLLFIVFSLVSGYL 190 Query: 285 VIWKYYDI--PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + +F + ++ L+ ++ EG + + ++ Sbjct: 191 FSFALGLRLLAPQIFLDQILRALQSRDLLNLLLTGMIPPLLTTVICCSEGLCLSLTRATV 250 Query: 343 GKKV----TTCVVQSISIVIIIDSLFAIF 367 T V S+ ++ + S+ Sbjct: 251 PNATSLALTRSTV-SLFLISVTISVLTYL 278 >gi|296141463|ref|YP_003648706.1| hypothetical protein Tpau_3789 [Tsukamurella paurometabola DSM 20162] gi|296029597|gb|ADG80367.1| protein of unknown function DUF140 [Tsukamurella paurometabola DSM 20162] Length = 272 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 107/245 (43%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 + + F + + L S K + I Q + IL++ Sbjct: 11 QLVAIFTRSLATIGKSVVLARSIVTWTVRGIVKGNFAVAETITQAVTLLRVTTLPAILVA 70 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 GAV++ Q + GA I +R+ L T V++ G SAI A++GS Sbjct: 71 VPFGAVVSVQVGALVDTVGANSLVGAASGIGIIRQGAPLATGVLLGGVCASAIAADLGSR 130 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + EE+ A++ MG+D + LI+PR+ AL+I P+L + A++ A V + + Sbjct: 131 TVREELQAMQVMGVDPIARLIAPRMLALMIIAPMLLVAIVAVAMMVALTVSVWQFGLSSG 190 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSIS 355 F+S F + + +++ ++KA A +G+VA G + V + VV SI+ Sbjct: 191 GFWSSFGAFSAPSDLAFAVLKAETGAMIVGLVAGLRGLEASGGPRGVADGVNSSVVLSIT 250 Query: 356 IVIII 360 ++ + Sbjct: 251 LIFLA 255 >gi|251773083|gb|EES53637.1| probable ABC transporter, permease [Leptospirillum ferrodiazotrophum] Length = 146 Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 66/138 (47%) Query: 231 EIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYY 290 E+G M ++I+A+ MG+D V L++P+I A ++ LP+L+++ +F ++ V Sbjct: 1 ELGMMSTTQQIEALLVMGVDPVDRLVAPKILAGMVMLPVLSVVGDFLGVLAGLAVAMFGA 60 Query: 291 DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCV 350 + +++S + T N+ G++K + + G + +G+ T V Sbjct: 61 HVAAPLYWSGVRTALTPPNLVNGIVKPFVFGFILVSIGCFYGLRTTGGAQGVGRATTKAV 120 Query: 351 VQSISIVIIIDSLFAIFY 368 V + ++I + L + Sbjct: 121 VYAAIWILIANFLISKLL 138 >gi|296165592|ref|ZP_06848117.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899065|gb|EFG78546.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 318 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 106/261 (40%), Gaps = 8/261 (3%) Query: 89 HRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQ----AHILGLVISNTGEFCA 144 HR + + ++ + G + K + + G + Sbjct: 22 HRGALHRAPFGNGAAPDGWRAVLTQPGASVAKAASRVGAIPARSTATTGRAVLMAAAVLR 81 Query: 145 S----SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI 200 + + + LI Q + + +L++ GA+IA Q + +++ GA Sbjct: 82 YAVLDTISMRLPVGELIVQAWTLLKVTAVPAVLMAVPFGAMIAVQVSGLVNEVGANSLIG 141 Query: 201 DLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRI 260 + + +R+ + +++ G + SAI A+ G+ I EE+DA+RT+G+D V+ L+ PR Sbjct: 142 SAIGVGVVRQGAPMTAGLLMGGAAASAIAADFGARAIREELDALRTLGIDPVQRLVVPRF 201 Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 AL++ P+L + S + A + D+ F+ F S A + +++ + K Sbjct: 202 LALVLIAPILCTIVIASGVAAAFTISVTVNDVTPGSFWLSFGSFAKMVDVWFAMGKTVTF 261 Query: 321 ACAIGIVAMKEGFAVGVHSNS 341 A + I++ G Sbjct: 262 AAFVAIISSMRGMEAKGGPRG 282 >gi|226329328|ref|ZP_03804846.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198] gi|225202514|gb|EEG84868.1| hypothetical protein PROPEN_03233 [Proteus penneri ATCC 35198] Length = 180 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 48/157 (30%), Positives = 87/157 (55%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTG 179 + + + G +F+ L++Q+Y VGV + ++++ G Sbjct: 7 RIGTRALAIFATFGRAGIMLFRALVGKPEFRKQWPLLLKQLYNVGVQSLLIIMVSGLFIG 66 Query: 180 AVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINE 239 V+ QG L+ F AE ++++ LRE+G ++TA++ AGR+GSA+ AEIG MK E Sbjct: 67 MVLGLQGYLVLTTFSAEASLGMMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATE 126 Query: 240 EIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 +I ++ M +D +R +++PR WA +IS+PLL+++ Sbjct: 127 QISSLEMMAVDPLRRVVAPRFWAGLISMPLLSLIFCC 163 >gi|31747666|gb|AAO38315.1| Lfe134p2 [Leptospirillum ferrooxidans] Length = 138 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 69/138 (50%) Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M++ E+IDA ++ ++ L++PR++A + +LPLLT LA+ I G V Sbjct: 1 LGTMRVTEQIDAFTSLAVNPQTYLMTPRVFAGLTALPLLTALADLVGIAGGYFVAVILLG 60 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 +P + L + ++GL+K+ + +++ GF + +G+ VT VV Sbjct: 61 LPHNSYVRGIAEYVNLHDFYSGLVKSAVFGGLLSLLSCHMGFYASGGAAGVGRSVTVAVV 120 Query: 352 QSISIVIIIDSLFAIFYF 369 S +++ D + + Sbjct: 121 ASSMAILVSDYFLTSWLY 138 >gi|325674885|ref|ZP_08154572.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|325554471|gb|EGD24146.1| ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 280 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVV 171 + + ++ QA + K L + G V +V Sbjct: 15 RTSRSVDRVGEQALFFWRALVWAPRALVHYK--KEVLRLIAEISMGTGALAVIGGTVVIV 72 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ TG IA QG L G E + + + +R ++ + +A G+ A+ Sbjct: 73 GFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTAQ 132 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+++EEIDA+ +M + V L+S R+ A +I++ L LA ++ + + YD Sbjct: 133 LGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLYD 192 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 V+ F + +I +A MA A+ ++ GF +G V V Sbjct: 193 QSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNASGGPVGVGVAVGNAVR 252 Query: 352 QSISIVIIIDSLFAI 366 S+ V+ + L ++ Sbjct: 253 ASLIAVVTVTLLISL 267 >gi|312138209|ref|YP_004005545.1| integral membrane protein yrbe2b [Rhodococcus equi 103S] gi|311887548|emb|CBH46860.1| putative integral membrane protein YrbE2B [Rhodococcus equi 103S] Length = 283 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 7/255 (2%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGV-----PVV 171 + + ++ QA + K L + G V +V Sbjct: 18 RTSRSVDRVGEQALFFWRALVWAPRALVHYK--KEVLRLIAEISMGTGALAVIGGTVVIV 75 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ TG IA QG L G E + + + +R ++ + +A G+ A+ Sbjct: 76 GFLTLFTGGTIAVQGFSSLGNIGVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGSTAQ 135 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 +G+M+++EEIDA+ +M + V L+S R+ A +I++ L LA ++ + + YD Sbjct: 136 LGAMRVSEEIDALESMAIPSVPYLVSTRVMAGMIAIVPLYSLAVIASFVASRFATVFLYD 195 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 V+ F + +I +A MA A+ ++ GF +G V V Sbjct: 196 QSPGVYDHYFSTFLNPTDILWSFAQAIAMALAVMLIHTYYGFNASGGPVGVGVAVGNAVR 255 Query: 352 QSISIVIIIDSLFAI 366 S+ V+ + L ++ Sbjct: 256 ASLIAVVTVTLLISL 270 >gi|41409701|ref|NP_962537.1| hypothetical protein MAP3603 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398533|gb|AAS06153.1| hypothetical protein MAP_3603 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 251 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 83/186 (44%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V +V ++ +++A QG L G E F+ +++ +R ++T + +A G Sbjct: 38 GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAAPVVTGIAMAATVG 97 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + AE+G+M+I+EEIDA+ MG+ + L + RI A ++ + L LA + + I Sbjct: 98 AGATAELGAMRISEEIDALEVMGIKSISFLATTRIMAGLVVIIPLYALAMIMSFLSPQIT 157 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 Y + F + ++F ++A + + I G+ G +G+ Sbjct: 158 TTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAIIITAVVMITHCFYGYNAGGGPVGVGEA 217 Query: 346 VTTCVV 351 V + Sbjct: 218 VGRSMR 223 >gi|289756667|ref|ZP_06516045.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289712231|gb|EFD76243.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|326902420|gb|EGE49353.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis W-148] Length = 295 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G + L + Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71 Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 G V ++ ++ G++IA QG L G E F+ ++ R ++ Sbjct: 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVETFTGFFAALANTRVAAPIV 131 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 Query: 336 GVHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 252 SGGPVGVGQAVGRSMR 267 >gi|289752627|ref|ZP_06512005.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289693214|gb|EFD60643.1| integral membrane protein [Mycobacterium tuberculosis EAS054] Length = 295 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G + L + Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71 Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 G V ++ ++ G++IA QG L G E F+ ++ R ++ Sbjct: 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 Query: 336 GVHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 252 SGGPVGVGQAVGRSMR 267 >gi|289552841|ref|ZP_06442051.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] gi|289437473|gb|EFD19966.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 605] Length = 294 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G + L + Sbjct: 13 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 70 Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 G V ++ ++ G++IA QG L G E F+ ++ R ++ Sbjct: 71 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 130 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 131 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 190 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 191 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 250 Query: 336 GVHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 251 SGGPVGVGQAVGRSMR 266 >gi|324999496|ref|ZP_08120608.1| hypothetical protein PseP1_12046 [Pseudonocardia sp. P1] Length = 285 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 95/249 (38%), Gaps = 2/249 (0%) Query: 124 DSCSQAHILGLVISNTGEFCAS-SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVI 182 + + + + + + ++ Q + +++ + V Sbjct: 28 GLRTGLETMADLARFSVRVVRDVPLALRLYPSEVLAQAGNLVRGSALIILFLIAVLALQS 87 Query: 183 AQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEID 242 G F + G ++ + S+ +R + ++ ++A + G IVAE+GSM+INEE+D Sbjct: 88 GVGGHFIFANPGINSYAGAIYSVALMRGLVEVIFGWIVAAKIGCGIVAEMGSMRINEEVD 147 Query: 243 AIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI-PFAVFFSRF 301 A+ MGL L R+ A ++ LP L + A ++ + F+ Sbjct: 148 ALDVMGLRSRAYLAGTRVAAAMLVLPFLFVTALLVQFQAGYLMSVHGMNTVSEGAFYEYL 207 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIID 361 + L + T LI IVA G+ +G+ + ++ ++ + Sbjct: 208 YLFQNLRDFITALIWGSVTGVMCVIVATFYGYNAKGGPVGVGESTARSMTVNLVLISALA 267 Query: 362 SLFAIFYFA 370 +FA ++ Sbjct: 268 VVFAQLFYG 276 >gi|15607728|ref|NP_215102.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Rv] gi|31791770|ref|NP_854263.1| integral membrane protein YrbE2b [Mycobacterium bovis AF2122/97] gi|121636506|ref|YP_976729.1| integral membrane protein YrbE2b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660357|ref|YP_001281880.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra] gi|148821790|ref|YP_001286544.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis F11] gi|224988978|ref|YP_002643665.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797522|ref|YP_003030523.1| hypothetical protein TBMG_00595 [Mycobacterium tuberculosis KZN 1435] gi|289446141|ref|ZP_06435885.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis CPHL_A] gi|289573188|ref|ZP_06453415.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85] gi|289744302|ref|ZP_06503680.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|289760707|ref|ZP_06520085.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis GM 1503] gi|298524075|ref|ZP_07011484.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308231594|ref|ZP_07413029.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu001] gi|308370001|ref|ZP_07419915.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu002] gi|308370453|ref|ZP_07421552.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu003] gi|308371712|ref|ZP_07425924.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu004] gi|308373528|ref|ZP_07432668.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu005] gi|308374049|ref|ZP_07434638.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu006] gi|308375204|ref|ZP_07443071.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu007] gi|308376450|ref|ZP_07438864.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu008] gi|308377469|ref|ZP_07479264.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu009] gi|308378677|ref|ZP_07483457.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu010] gi|308379821|ref|ZP_07487689.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu011] gi|308395898|ref|ZP_07492196.2| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu012] gi|2222770|emb|CAB09950.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B [Mycobacterium tuberculosis H37Rv] gi|31617357|emb|CAD93465.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE2B [Mycobacterium bovis AF2122/97] gi|121492153|emb|CAL70618.1| Conserved hypothetical integral membrane protein yrbE2B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504509|gb|ABQ72318.1| conserved hypothetical integral membrane protein YrbE2b [Mycobacterium tuberculosis H37Ra] gi|148720317|gb|ABR04942.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis F11] gi|224772091|dbj|BAH24897.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253319025|gb|ACT23628.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 1435] gi|289419099|gb|EFD16300.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis CPHL_A] gi|289537619|gb|EFD42197.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis K85] gi|289684830|gb|EFD52318.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|289708213|gb|EFD72229.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis GM 1503] gi|298493869|gb|EFI29163.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308216591|gb|EFO75990.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu001] gi|308325672|gb|EFP14523.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu002] gi|308331898|gb|EFP20749.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu003] gi|308335685|gb|EFP24536.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu004] gi|308337264|gb|EFP26115.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu005] gi|308343189|gb|EFP32040.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu006] gi|308347056|gb|EFP35907.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu007] gi|308350999|gb|EFP39850.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu008] gi|308355633|gb|EFP44484.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu009] gi|308359588|gb|EFP48439.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu010] gi|308363516|gb|EFP52367.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu011] gi|308367197|gb|EFP56048.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis SUMu012] gi|328457305|gb|AEB02728.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis KZN 4207] Length = 295 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G + L + Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71 Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 G V ++ ++ G++IA QG L G E F+ ++ R ++ Sbjct: 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 Query: 336 GVHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 252 SGGPVGVGQAVGRSMR 267 >gi|168702230|ref|ZP_02734507.1| hypothetical protein GobsU_22062 [Gemmata obscuriglobus UQM 2246] Length = 256 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 2/231 (0%) Query: 124 DSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIA 183 ++ + LG + + T +S+ +R Y V + G+P+ ++ G VI Sbjct: 3 EAINFLERLGRLAAFTPRAVLASFTTLRRSGLWLRPFYSVTIGGLPLALVTGLALGVVIW 62 Query: 184 QQGAFQLSQFG--AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEI 241 L++ G A + ++ L E+ + +++A R+G+++ AE+ SM+++E+I Sbjct: 63 MHTRDVLARTGTGAVEYLPTFLAAAVLLELAPVGAGLIVAARTGASLGAELASMRVSEQI 122 Query: 242 DAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRF 301 DA+ +G+ +R L+ PRI A + + PLL +L +A+ I F + + Sbjct: 123 DAMELLGVSTIRALVGPRIVACVFAAPLLHVLIAATALGSGFIAELATGSTTFLKYNTAA 182 Query: 302 HSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 L ++ +K +G+ G + S +G+ T VV Sbjct: 183 VRELVLQDVIPAGLKTLVFGLIVGVTGCFAGLSAREGSEGVGRAATDSVVA 233 >gi|289441977|ref|ZP_06431721.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289568521|ref|ZP_06448748.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289749085|ref|ZP_06508463.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] gi|289414896|gb|EFD12136.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T46] gi|289542275|gb|EFD45923.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T17] gi|289689672|gb|EFD57101.1| hypothetical membrane protein yrbE2B [Mycobacterium tuberculosis T92] Length = 295 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 7/256 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G + L + Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRVSVVQIGWALRRYR--RETLRLVAEIG 71 Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 G V ++ ++ G++IA QG L G E F+ ++ R ++ Sbjct: 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A +V +Y + F + ++ +++ +A + I G+ Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMITHCYYGYTA 251 Query: 336 GVHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 252 SGGPVGVGQAVGRSMR 267 >gi|15839990|ref|NP_335027.1| hypothetical protein MT0617 [Mycobacterium tuberculosis CDC1551] gi|254230928|ref|ZP_04924255.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|254363546|ref|ZP_04979592.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|13880132|gb|AAK44841.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124599987|gb|EAY58997.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis C] gi|134149060|gb|EBA41105.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis str. Haarlem] gi|323720940|gb|EGB30005.1| hypothetical protein TMMG_03291 [Mycobacterium tuberculosis CDC1551A] Length = 295 Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 7/256 (2%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 Y G + + + + A + + G + L + Sbjct: 14 RARYPRTAASLDRYGGGTARRLERTGTFARFTRISVVQIGWALRRYR--RETLRLVAEIG 71 Query: 161 YYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 G V ++ ++ G++IA QG L G E F+ ++ R ++ Sbjct: 72 MGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTRVAAPIV 131 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 + V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI ++ + L LA Sbjct: 132 SGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLVVIMPLYALAL 191 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A +V +Y + F + ++ +++ +A + I+ G+ Sbjct: 192 DMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEVVIIAVVVMIIHCYYGYTA 251 Query: 336 GVHSNSLGKKVTTCVV 351 +G+ V + Sbjct: 252 SGGPVGVGQAVGRSMR 267 >gi|319951382|ref|ZP_08025207.1| YrbE family protein [Dietzia cinnamea P4] gi|319434979|gb|EFV90274.1| YrbE family protein [Dietzia cinnamea P4] Length = 187 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 80/173 (46%) Query: 194 GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVR 253 G E + + + +R ++ + +A G+ A++G+M+++EEIDA+ M +D + Sbjct: 2 GVEALTGFFAAFINVRIAAPVIAGIGLAATIGAGATAQLGAMRVSEEIDALEVMAIDSIT 61 Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+S RI A +I++ L LA ++ + + + Y V+ F + +I Sbjct: 62 YLVSTRIVAGMIAVVPLYSLAVIASFLASRFATVEIYGQSGGVYDHYFSTFLIPTDILWS 121 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAI 366 ++A MA I ++ G+ +G V V S+ V+ + L ++ Sbjct: 122 FVQAIAMAITIMLIHTYYGYNAAGGPAGVGSAVGNAVRTSLIAVVTVTLLVSL 174 >gi|41410181|ref|NP_963017.1| hypothetical protein MAP4083 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399015|gb|AAS06633.1| hypothetical protein MAP_4083 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 292 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 7/262 (2%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 + Y G V+ + A + I TG + L Sbjct: 5 SAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQTGWALRHYR--RETLR 62 Query: 155 SLIRQMYYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 + G V ++ ++ G++IA QG L G E F+ ++ R Sbjct: 63 LVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR 122 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI + + Sbjct: 123 IAAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVP 182 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L LA A +V +Y + F + ++ + + +A + I Sbjct: 183 LYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHC 242 Query: 330 KEGFAVGVHSNSLGKKVTTCVV 351 G+ +G V + Sbjct: 243 YYGYTASGGPVGVGHAVGRSMR 264 >gi|118467306|ref|YP_883683.1| hypothetical protein MAV_4552 [Mycobacterium avium 104] gi|118168593|gb|ABK69490.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 292 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 7/262 (2%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 + Y G V+ + A + I G + L Sbjct: 5 SAPGALRARYPRTAANLDRYGGGTVRRLWQIGIFARFARISIGQIGWALRHYR--RETLR 62 Query: 155 SLIRQMYYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 + G V ++ ++ G++IA QG L G E F+ ++ R Sbjct: 63 LVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR 122 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI + + Sbjct: 123 IAAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVP 182 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L LA A +V +Y + F + ++ + + +A + I Sbjct: 183 LYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVFEVVIIAVVVMITHC 242 Query: 330 KEGFAVGVHSNSLGKKVTTCVV 351 G+ +G V + Sbjct: 243 YYGYTASGGPVGVGHAVGRSMR 264 >gi|108757210|ref|YP_632090.1| hypothetical protein MXAN_3910 [Myxococcus xanthus DK 1622] gi|108461090|gb|ABF86275.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 248 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 3/246 (1%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 G + +S + + Q++ +G V +V+ GAV+ Sbjct: 3 GVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVTIA 62 Query: 187 AFQLSQF-GAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIR 245 Q +F G L +RE+G ++A++ A R+G+A AE+ +M +NE+++A+ Sbjct: 63 NSQARRFVGNVAVLGPAYFELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALE 122 Query: 246 TMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA 305 D L++PR++A ++ +PLL IL +A + A+ V + + F Sbjct: 123 MSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAAAVAQFAFGVDGRAFMD--PRYV 180 Query: 306 TLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFA 365 ++ L+KA I + A G + ++G+ T VV + ++ID + Sbjct: 181 DGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS 240 Query: 366 IFYFAI 371 + + + Sbjct: 241 LAFQLL 246 >gi|262203810|ref|YP_003275018.1| hypothetical protein Gbro_3951 [Gordonia bronchialis DSM 43247] gi|262087157|gb|ACY23125.1| protein of unknown function DUF140 [Gordonia bronchialis DSM 43247] Length = 283 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 7/220 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILISF 176 + QA I K L + G V VV ++ Sbjct: 23 WDQVGDQALFYWDSIVAIPRALRLYK--KETLRLIAEISMGTGALAMIGGTVVVVGFLTL 80 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG IA QG L+ G E + + + +R +++ + +A G+ A++G+M+ Sbjct: 81 FTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVISGIALAATIGAGATAQLGAMR 140 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++EEIDA+ TM + + L+S RI A +I++ L LA+ ++ + + Y V Sbjct: 141 VSEEIDALETMAISSIPYLVSTRIVAGLIAIIPLYALASLASFLASRFATVFIYGQSPGV 200 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + F + ++I ++A MA A+ ++ GF Sbjct: 201 YDHYFDTFLIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240 >gi|296165199|ref|ZP_06847746.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899388|gb|EFG78847.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 258 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 86/193 (44%) Query: 136 ISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGA 195 + F + +RQ ++ + V IL+S ++ Q A Q GA Sbjct: 38 VRTVQYFFFDLLTGRFQWQEFVRQGAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGA 97 Query: 196 EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRIL 255 + + +R+ L+ AV++A GSAI A++GS + EE DA+ MG+ +R L Sbjct: 98 TSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRL 157 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLI 315 + PR+ A ++ LT + F+ + + + + F S F S AT +I L+ Sbjct: 158 VVPRLAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTFASFATTGDIILALV 217 Query: 316 KAPFMACAIGIVA 328 KA + +V+ Sbjct: 218 KAIVFGAIVAVVS 230 >gi|54022503|ref|YP_116745.1| putative YrbE family protein [Nocardia farcinica IFM 10152] gi|54014011|dbj|BAD55381.1| putative YrbE family protein [Nocardia farcinica IFM 10152] Length = 283 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 93/232 (40%), Gaps = 1/232 (0%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 + + + + A L + + + + + + Sbjct: 8 RFPRAVRRVRRMSDSLDSVGKHAVFYAQALASIPRALMHYRTETIRLIAEISMGTGALAV 67 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 +G V +V ++ +G IA QG L G E + + L +R +++ + +A Sbjct: 68 IG-GTVVIVGFLTLFSGGTIAVQGYSSLGNIGVEALTGFFSAFLNVRIAAPVISGIGLAA 126 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 G+ A++G+M+++EEIDA+ TM + V LI R+ A +I++ L LA ++ A Sbjct: 127 TIGAGSTAQLGAMRVSEEIDALETMAIRPVPYLIGTRVLAGMIAIVPLYALAVIASFFAA 186 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 Y V+ F + ++I +A MA A+ ++ G+ Sbjct: 187 RFATVVIYGQSAGVYDHYFSTFLIPSDILWSFSQAILMALAVMMIHTYYGYF 238 >gi|254776984|ref|ZP_05218500.1| hypothetical protein MaviaA2_20266 [Mycobacterium avium subsp. avium ATCC 25291] Length = 292 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 7/262 (2%) Query: 95 NQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLL 154 + Y G V+ + A + I G + L Sbjct: 5 SAPGALRARYPRTAANLDRYGGGTVRRLWQIGVFARFARVSIGQIGWALRHYR--RETLR 62 Query: 155 SLIRQMYYVGVSGVP-----VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 + G V ++ ++ G++IA QG L G E F+ ++ R Sbjct: 63 LVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEAFTGFFAALANTR 122 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 ++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S RI + + Sbjct: 123 IAAPIVAGVTLAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVSTRILGGLAVIVP 182 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAM 329 L LA A +V +Y + F + ++ + + +A + I Sbjct: 183 LYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWAVFEVVIIAVVVMITHC 242 Query: 330 KEGFAVGVHSNSLGKKVTTCVV 351 G+ +G V + Sbjct: 243 YYGYTASGGPVGVGHAVGRSMR 264 >gi|260426504|ref|ZP_05780483.1| membrane protein [Citreicella sp. SE45] gi|260420996|gb|EEX14247.1| membrane protein [Citreicella sp. SE45] Length = 137 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 59/137 (43%) Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 MK+ E+IDA+ T+ + ++ L++PR+ A ++ +PLL + + I G V Sbjct: 1 MKVTEQIDALVTLSTNPMKYLVAPRLLAGLVVVPLLVGVGDVIGIFGGWFVATSSLGFNP 60 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 A + ++ + L+K ++ G G + +G+ V + Sbjct: 61 AAYLKNTLDFLEPLDVISSLVKGCAFGGIAALMGCYHGMHSGRGAQGVGRATKGSVEAAA 120 Query: 355 SIVIIIDSLFAIFYFAI 371 +++ + L +F+I Sbjct: 121 VLILAANFLLTGVFFSI 137 >gi|296163927|ref|ZP_06846563.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900708|gb|EFG80078.1| ABC superfamily ATP binding cassette transporter, membrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 283 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 103/246 (41%), Gaps = 7/246 (2%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILI 174 + ++ S A +G V+ G + K L + G V ++ + Sbjct: 21 RALDASGDVALFVGEVLRYLGFTLKNYR--KEVLRLIAEIGMGTGAMAAVGGTVAIIGFV 78 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + G++IA QG L G E F+ ++ +R + ++T +A G+ A++G+ Sbjct: 79 TLSAGSLIAIQGFASLGNIGVEAFTGFFAALANVRVVAPIVTGTALAATVGAGATAQLGA 138 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+I+EEIDA+ MG+ V L+S R+ I L +A + A +V +Y Sbjct: 139 MRISEEIDALEVMGIKSVSYLVSTRVIGAFIVTIPLYSVAVLLSFFSAQLVTTLFYAQSI 198 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSI 354 + F++ + + + L + ++ + + G+ +G V + S+ Sbjct: 199 GTYDHYFNTFLRVNDFWYSLAETVAISAVVMLNHCYYGYNASGGPVGVGVAVGRSMRASL 258 Query: 355 SIVIII 360 ++++ Sbjct: 259 IAIVMV 264 >gi|169631232|ref|YP_001704881.1| hypothetical protein MAB_4154c [Mycobacterium abscessus ATCC 19977] gi|169243199|emb|CAM64227.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 286 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 111/259 (42%), Gaps = 1/259 (0%) Query: 108 KNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG 167 +G+ KF + A L + + ++ + + + + +G Sbjct: 16 VRYMRGLGRSFDKFGEQALFYAQSLSYIPAALTKYRKETIRVLAEITMGTGALVMIG-GT 74 Query: 168 VPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSA 227 V V + ++ +G VIA QG L G E + L + L +R + ++ + +A G+ Sbjct: 75 VGVAVFLTLASGGVIAVQGYSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAG 134 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 A++G+M++ EEIDA+ TM + + L+S R+ A +I++ L L+ +A + Sbjct: 135 TTAQLGAMRVAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTV 194 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 V+ F++ ++ ++A M+ + +V GF +G V Sbjct: 195 MINGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGPVGVGVAVG 254 Query: 348 TCVVQSISIVIIIDSLFAI 366 V S+ +V+++ ++ Sbjct: 255 QAVRTSLIVVVLVTLFISL 273 >gi|120401935|ref|YP_951764.1| hypothetical protein Mvan_0920 [Mycobacterium vanbaalenii PYR-1] gi|119954753|gb|ABM11758.1| protein of unknown function DUF140 [Mycobacterium vanbaalenii PYR-1] Length = 255 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 102/239 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 +G + + + + I QM++V + +++S + Sbjct: 11 MRAVGGFFATAVDTAVLAPQPPFAWREFIFQMWFVARVSIFPTVMLSIPFTVLSVFIFNI 70 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 L +FGA FS + + +IG L+T +++AG + +A+ A++G+ I EE+DA+R MG Sbjct: 71 LLVEFGAADFSGAGAAFGAVTQIGPLVTVLVVAGAAATAMCADLGARTIREELDAMRVMG 130 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 ++ ++ L+ PR+ A ++ LL + + ++G + F + L Sbjct: 131 INPLQALVVPRVLATVVVALLLNSVVSVVGVVGGFFFSVFVQHVTPGAFVAGMTLFTGLP 190 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 I L KA ++ +G +VG +G V VV S + +I+ + Sbjct: 191 EIIISLTKASLFGLVAALIGCYKGISVGGGPVGVGTAVNETVVFSFMALFVINVVVTAV 249 >gi|153846369|ref|ZP_01993858.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|149744914|gb|EDM56276.1| ABC-type transport system, permease component [Vibrio parahaemolyticus AQ3810] Length = 220 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 2/192 (1%) Query: 87 FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS 146 + +G + + S + + + Sbjct: 31 SLAELVPPSNIENAPQIPRGEDGFFERVGNATREMLVYVGSVVRFIKECVLVF--KLGIN 88 Query: 147 YKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSIL 206 + ++ G VP+++LI F+ G +IA + QFGA +F D + I Sbjct: 89 RRKNVNWTTVSNIATRAGADAVPIILLIGFLMGVIIAFEIGLVAQQFGAVLFVADGIGIS 148 Query: 207 QLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIIS 266 RE+G L+TA++ AGR+G+A AEIG+ K+NEEI+A+ T G+ V L+ PRI+A ++ Sbjct: 149 MFRELGPLMTAIVFAGRTGAAFAAEIGTQKVNEEINALHTFGICPVEFLVIPRIYASVLV 208 Query: 267 LPLLTILANFSA 278 LPLLT+LA+ Sbjct: 209 LPLLTVLADIIG 220 >gi|126433442|ref|YP_001069133.1| hypothetical protein Mjls_0833 [Mycobacterium sp. JLS] gi|126233242|gb|ABN96642.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 297 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 97/239 (40%), Gaps = 4/239 (1%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV----ILISFVTGAVIAQQGAF 188 G + + + + +++ + + V +L++ GA+ + Sbjct: 49 GRGVQLFADVLRYVVTDAITMRLAVGEVFVQAWTLLKVTTMPALLMAIPIGAITTIVTSG 108 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 ++Q GA + +R+ L +++ + S I A+ G+ I EE+DA+R MG Sbjct: 109 LVNQLGATSLLGAAAGVGVIRQGAPLTAGLLMGAAAASTIAADFGARAIREELDAMRVMG 168 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 +D VR L+ PR AL++ PLL I S A ++ D+ F+ F + + Sbjct: 169 VDPVRQLVVPRFLALLLISPLLCIFIVASGTASAFLMAVGASDVAPGSFWMSFGTFTKVV 228 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +++ + K + IV+ G + V + VV ++ +++ + Sbjct: 229 DVWFAIAKTVVFGAIVAIVSSLRGMEAKGGPRGVADAVNSSVVVNVVLIVFANLAITQL 287 >gi|215444701|ref|ZP_03431453.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T85] gi|294996100|ref|ZP_06801791.1| hypothetical protein Mtub2_16770 [Mycobacterium tuberculosis 210] Length = 246 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 9/214 (4%) Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + + +R + +G+ V ++ ++ G++IA QG L G E Sbjct: 5 WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVET 64 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ ++ R +++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S Sbjct: 65 FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 RI ++ + L LA A +V +Y + F + ++ +++ Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 +A + I G+ +G+ V + Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMR 218 >gi|167969011|ref|ZP_02551288.1| hypothetical integral membrane protein yrbE2B [Mycobacterium tuberculosis H37Ra] gi|215402356|ref|ZP_03414537.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 02_1987] gi|215410129|ref|ZP_03418937.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis 94_M4241A] gi|215425820|ref|ZP_03423739.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T92] gi|215429421|ref|ZP_03427340.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis EAS054] gi|218752228|ref|ZP_03531024.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis GM 1503] gi|219556430|ref|ZP_03535506.1| integral membrane protein YrbE2b [Mycobacterium tuberculosis T17] gi|254549543|ref|ZP_05139990.1| hypothetical protein Mtube_03620 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185465|ref|ZP_05762939.1| hypothetical protein MtubCP_05439 [Mycobacterium tuberculosis CPHL_A] gi|260199593|ref|ZP_05767084.1| hypothetical protein MtubT4_05539 [Mycobacterium tuberculosis T46] gi|260203752|ref|ZP_05771243.1| hypothetical protein MtubK8_05504 [Mycobacterium tuberculosis K85] gi|297633082|ref|ZP_06950862.1| hypothetical protein MtubK4_03110 [Mycobacterium tuberculosis KZN 4207] gi|297730060|ref|ZP_06959178.1| hypothetical protein MtubKR_03155 [Mycobacterium tuberculosis KZN R506] gi|313657387|ref|ZP_07814267.1| hypothetical protein MtubKV_03145 [Mycobacterium tuberculosis KZN V2475] Length = 246 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 9/214 (4%) Query: 147 YKFKGFLLSLIRQMYYVGVSG---------VPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + + +R + +G+ V ++ ++ G++IA QG L G E Sbjct: 5 WALRRYRRETLRLVAEIGMGTGAMAVVGGTVAIIGFVTLSGGSLIAIQGFASLGNIGVEA 64 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 F+ ++ R +++ V +A G+ A++G+M+I+EEIDA+ MG+ + L+S Sbjct: 65 FTGFFAALANTRVAAPIVSGVALAATVGAGATAQLGAMRISEEIDALEVMGIKSISFLVS 124 Query: 258 PRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKA 317 RI ++ + L LA A +V +Y + F + ++ +++ Sbjct: 125 TRILGGLVVIMPLYALALDMAFTSGQVVTTVFYGQSNGTYEHYFRTFLRPEDVGWSVVEV 184 Query: 318 PFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVV 351 +A + I G+ +G+ V + Sbjct: 185 VIIAVVVMITHCYYGYTASGGPVGVGQAVGRSMR 218 >gi|108797096|ref|YP_637293.1| hypothetical protein Mmcs_0116 [Mycobacterium sp. MCS] gi|119866181|ref|YP_936133.1| hypothetical protein Mkms_0125 [Mycobacterium sp. KMS] gi|126432719|ref|YP_001068410.1| hypothetical protein Mjls_0106 [Mycobacterium sp. JLS] gi|108767515|gb|ABG06237.1| protein of unknown function DUF140 [Mycobacterium sp. MCS] gi|119692270|gb|ABL89343.1| protein of unknown function DUF140 [Mycobacterium sp. KMS] gi|126232519|gb|ABN95919.1| protein of unknown function DUF140 [Mycobacterium sp. JLS] Length = 265 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 99/258 (38%), Gaps = 1/258 (0%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + G + +G + + ++ I Q +++ Sbjct: 1 MTASSGGLTGYVRDQVRPGLEAVGGFVRMCVLTGKALFR-PFQWREFILQAWFLFRVSFL 59 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + +S +I L++FGA S ++ + ++G L+T +++AG +AI Sbjct: 60 PTVAVSVPLTVLIIFTLNILLAEFGAADVSGAGAALGAVTQLGPLVTVLVVAGAGSTAIC 119 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 A++G+ I EEIDA+ +G+D + L+ PR+ A LL ++G I Sbjct: 120 ADLGARTIREEIDALEVLGIDPIHRLVVPRVVASTFVALLLNGAVITIGLVGGFIFGVYI 179 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTC 349 ++ + S L + ++KA G+V G VG + +G V Sbjct: 180 QNVSAGAYVSTLTLVTGLPEVLISVVKATTFGLIAGLVGCYRGLTVGGGAKGVGTGVNET 239 Query: 350 VVQSISIVIIIDSLFAIF 367 +V + + ++ + Sbjct: 240 LVLCVVALFAVNVVLTTI 257 >gi|85860837|ref|YP_463039.1| ABC transporter permease [Syntrophus aciditrophicus SB] gi|85723928|gb|ABC78871.1| ABC transporter permease protein [Syntrophus aciditrophicus SB] Length = 269 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 4/271 (1%) Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 F S IG K + + I + + + K ++ Q+ Sbjct: 3 PFGRKSMVTFIEGIGTKALVVARSVINTLFFAWRAIVHLADRKTYNNATKM---VIVTQL 59 Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 Y+ V +P+ I IS + G + + G + +++ + E+ +T +M+ Sbjct: 60 YFTAVQILPLFISISVILGLFLMGIVFESIKNLGMTGYLGNILMGFIVTELCPFMTVLML 119 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAII 280 A RSG+AI EI MK+N+E DA+ +D + PRI ++S+ LL + + Sbjct: 120 ALRSGAAINTEIAVMKVNKEFDALSVFNIDIFDYIYVPRILNGVVSVVLLNGVFTLVLLT 179 Query: 281 GASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 +I + I + S ++A ++ L+K I ++ ++ G Sbjct: 180 SGAIFSRVIFGIGMDAYISILITSAEFPDLVILLLKCATFGFFITLLPIRYGLTASNELT 239 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 S+ V ++ ++II+ + ++ +I Sbjct: 240 SIPIAVLNGMINVFIAIVIIE-VISLILSSI 269 >gi|326383098|ref|ZP_08204787.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL B-59395] gi|326198234|gb|EGD55419.1| hypothetical protein SCNU_09176 [Gordonia neofelifaecis NRRL B-59395] Length = 283 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 7/220 (3%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG-----VPVVILISF 176 N QA I++ K L + G V VV ++ Sbjct: 23 WNKIGDQALFYWDAIASIPRAIRLYK--KETLRLIAEISMGTGALAMIGGTVVVVGFLTL 80 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 TG IA QG L+ G E + + + +R ++ + +A G+ A++G+M+ Sbjct: 81 FTGGTIAVQGYSSLANIGVEALTGFFSAFINVRIAVPVIAGIALAATIGAGATAQLGAMR 140 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAV 296 ++EEIDA+ M + V L+S RI A ++++ L LA ++ + + Y V Sbjct: 141 VSEEIDALEVMAISSVPYLVSTRIVAGLVAIIPLYSLAALASFLASRFATVVLYGQSSGV 200 Query: 297 FFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 + F + ++I ++A MA A+ ++ GF Sbjct: 201 YDHYFSTFLIPSDILWSFVQAICMAVAVMLIHTYYGFNAS 240 >gi|110348077|gb|ABG72766.1| YrbE1B-HA [Expression vector yrbE1AB] Length = 300 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + + + + + +G + + + + + Sbjct: 8 RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R G ++T Sbjct: 68 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + I Y + F + ++F ++A + + + G+ Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|291279860|ref|YP_003496695.1| ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754562|dbj|BAI80939.1| ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 258 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 4/223 (1%) Query: 118 IVKFINDSCSQAHILGLVISNTGEFCASSYKF----KGFLLSLIRQMYYVGVSGVPVVIL 173 I + L I + + S +KF K +RQ+Y+ GV +P+ I Sbjct: 5 IESLGSYVVGFFLFLQNYIIFSLQILKSLFKFNLFNKAIFSVYLRQVYFTGVQILPIYIF 64 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 IS + G + + L G L+ +L +RE+G L+T ++++ RS +A+ AEI Sbjct: 65 ISLIFGIALVGILSKLLIDLGIYNELGKLLVLLIVRELGPLVTVILLSLRSSTAVGAEIS 124 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 MK++ EI+ + +D + L PR+ A + + L+I +F +I G ++I I Sbjct: 125 VMKLSGEIETLTFFEIDPLIYLFLPRVLAGLTCMVSLSIFFSFVSITGGYLLISFKLGIT 184 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 F ++++I K + + + +V Sbjct: 185 FDYLMKLIFDYISISDIAAFFYKTIMFGFFLMSIPIFSALSVK 227 >gi|215414033|ref|ZP_03422692.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis 94_M4241A] Length = 298 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + + + + + +G + + + + + Sbjct: 17 RARFPRAVANLRQYGVAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 76 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R G ++T Sbjct: 77 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 135 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 136 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 195 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + I Y + F + ++F ++A + + + G+ Sbjct: 196 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 252 >gi|260203313|ref|ZP_05770804.1| hypothetical protein MtubK8_03240 [Mycobacterium tuberculosis K85] Length = 298 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + + + + + +G + + + + + Sbjct: 17 RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 76 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R G ++T Sbjct: 77 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 135 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 136 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 195 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + I Y + F + ++F ++A + + + G+ Sbjct: 196 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCYYGY 252 >gi|167970289|ref|ZP_02552566.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis H37Ra] gi|215406161|ref|ZP_03418342.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis 02_1987] gi|215425375|ref|ZP_03423294.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T92] gi|215433088|ref|ZP_03431007.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis EAS054] gi|215448447|ref|ZP_03435199.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T85] gi|218755902|ref|ZP_03534698.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis GM 1503] gi|219555966|ref|ZP_03535042.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis T17] gi|254549107|ref|ZP_05139554.1| hypothetical protein Mtube_01356 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185031|ref|ZP_05762505.1| hypothetical protein MtubCP_03117 [Mycobacterium tuberculosis CPHL_A] gi|260199171|ref|ZP_05766662.1| hypothetical protein MtubT4_03255 [Mycobacterium tuberculosis T46] gi|294994642|ref|ZP_06800333.1| hypothetical protein Mtub2_09022 [Mycobacterium tuberculosis 210] gi|297632646|ref|ZP_06950426.1| hypothetical protein MtubK4_00906 [Mycobacterium tuberculosis KZN 4207] gi|297729621|ref|ZP_06958739.1| hypothetical protein MtubKR_00936 [Mycobacterium tuberculosis KZN R506] gi|313656947|ref|ZP_07813827.1| hypothetical protein MtubKV_00921 [Mycobacterium tuberculosis KZN V2475] Length = 298 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + + + + + +G + + + + + Sbjct: 17 RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 76 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R G ++T Sbjct: 77 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 135 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 136 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 195 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + I Y + F + ++F ++A + + + G+ Sbjct: 196 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 252 >gi|298527560|ref|ZP_07014969.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] gi|298497354|gb|EFI32648.1| YrbE1B-HA [Mycobacterium tuberculosis 94_M4241A] Length = 289 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + + + + + +G + + + + + Sbjct: 8 RARFPRAVANLRQYGVAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R G ++T Sbjct: 68 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + I Y + F + ++F ++A + + + G+ Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|289572748|ref|ZP_06452975.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] gi|289537179|gb|EFD41757.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis K85] Length = 289 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + + + + + +G + + + + + Sbjct: 8 RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R G ++T Sbjct: 68 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + I Y + F + ++F ++A + + + G+ Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPEDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|15607309|ref|NP_214682.1| integral membrane protein YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31791346|ref|NP_853839.1| integral membrane protein YRBE1B [Mycobacterium bovis AF2122/97] gi|121636080|ref|YP_976303.1| integral membrane protein YrbE1b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659932|ref|YP_001281455.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra] gi|148821360|ref|YP_001286114.1| integral membrane protein YrbE1b [Mycobacterium tuberculosis F11] gi|224988553|ref|YP_002643240.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797090|ref|YP_003030091.1| hypothetical protein TBMG_00169 [Mycobacterium tuberculosis KZN 1435] gi|254233557|ref|ZP_04926883.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis C] gi|254366620|ref|ZP_04982664.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis str. Haarlem] gi|289441543|ref|ZP_06431287.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T46] gi|289445699|ref|ZP_06435443.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis CPHL_A] gi|289552420|ref|ZP_06441630.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 605] gi|289568067|ref|ZP_06448294.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T17] gi|289747935|ref|ZP_06507313.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis 02_1987] gi|289748644|ref|ZP_06508022.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T92] gi|289756233|ref|ZP_06515611.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289760270|ref|ZP_06519648.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289764284|ref|ZP_06523662.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis GM 1503] gi|306774258|ref|ZP_07412595.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu001] gi|306782790|ref|ZP_07421112.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu003] gi|306801753|ref|ZP_07438421.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu008] gi|307082301|ref|ZP_07491471.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu011] gi|308369322|ref|ZP_07417339.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu002] gi|308371608|ref|ZP_07425479.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu004] gi|308372825|ref|ZP_07430015.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu005] gi|308373908|ref|ZP_07434059.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu006] gi|308375089|ref|ZP_07442632.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu007] gi|308378565|ref|ZP_07483021.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu009] gi|308379713|ref|ZP_07487253.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu010] gi|308394823|ref|ZP_07491759.2| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu012] gi|2213505|emb|CAB09751.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B [Mycobacterium tuberculosis H37Rv] gi|31616931|emb|CAD93038.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE1B [Mycobacterium bovis AF2122/97] gi|121491727|emb|CAL70189.1| Conserved hypothetical integral membrane protein yrbE1B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124603350|gb|EAY61625.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis C] gi|134152132|gb|EBA44177.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis str. Haarlem] gi|148504084|gb|ABQ71893.1| conserved hypothetical integral membrane protein YrbE1b [Mycobacterium tuberculosis H37Ra] gi|148719887|gb|ABR04512.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis F11] gi|224771666|dbj|BAH24472.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318593|gb|ACT23196.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 1435] gi|289414462|gb|EFD11702.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T46] gi|289418657|gb|EFD15858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis CPHL_A] gi|289437052|gb|EFD19545.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 605] gi|289541820|gb|EFD45469.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T17] gi|289688463|gb|EFD55951.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis 02_1987] gi|289689231|gb|EFD56660.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis T92] gi|289696820|gb|EFD64249.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289711790|gb|EFD75806.1| hypothetical integral membrane protein yrbE1B [Mycobacterium tuberculosis GM 1503] gi|289715834|gb|EFD79846.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|308217092|gb|EFO76491.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu001] gi|308328030|gb|EFP16881.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu002] gi|308332310|gb|EFP21161.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu003] gi|308336192|gb|EFP25043.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu004] gi|308339692|gb|EFP28543.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu005] gi|308343699|gb|EFP32550.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu006] gi|308347572|gb|EFP36423.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu007] gi|308351471|gb|EFP40322.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu008] gi|308352198|gb|EFP41049.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu009] gi|308356147|gb|EFP44998.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu010] gi|308360102|gb|EFP48953.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu011] gi|308367650|gb|EFP56501.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis SUMu012] gi|323717157|gb|EGB26366.1| hypothetical protein TMMG_00597 [Mycobacterium tuberculosis CDC1551A] gi|326905925|gb|EGE52858.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis W-148] gi|328456877|gb|AEB02300.1| hypothetical membrane protein yrbE1B [Mycobacterium tuberculosis KZN 4207] gi|328864230|gb|AEB53198.1| conserved integral membrane protein YRBE1B [Mycobacterium tuberculosis] Length = 289 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 1/237 (0%) Query: 97 KPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSL 156 + + + + + + + + +G + + + + + Sbjct: 8 RARFPRAVANLRQYGGAAARGLDEAGQLTWFALTSIGQIAHALRYYRKETLRLIAQIGMG 67 Query: 157 IRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 M VG V +V ++ +++A QG L G E F+ +++ +R G ++T Sbjct: 68 TGAMAVVG-GTVAIVGFVTLSGSSLVAIQGFASLGNIGVEAFTGFFAALINVRIAGPVVT 126 Query: 217 AVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANF 276 V +A G+ AE+G+M+I+EEIDA+ MG+ + L S RI A ++ + L LA Sbjct: 127 GVALAATVGAGATAELGAMRISEEIDALEVMGIKSISFLASTRIMAGLVVIIPLYALAMI 186 Query: 277 SAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGF 333 + + I Y + F + ++F ++A + + + G+ Sbjct: 187 MSFLSPQITTTVLYGQSNGTYEHYFQTFLRPDDVFWSFLEALIITAIVMVSHCYYGY 243 >gi|219559567|ref|ZP_03538643.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T17] gi|260202679|ref|ZP_05770170.1| hypothetical protein MtubT4_21963 [Mycobacterium tuberculosis T46] gi|289445097|ref|ZP_06434841.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T46] gi|289571733|ref|ZP_06451960.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T17] gi|289418016|gb|EFD15256.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T46] gi|289545487|gb|EFD49135.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T17] Length = 280 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 111/261 (42%), Gaps = 1/261 (0%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 F+ + + + F + + V + + + + + + +G Sbjct: 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG- 66 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V ++ +G VIA QG L G E L + L +R + ++ + +A G Sbjct: 67 GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALIGFLSAFLNVRVVAPVIAGIALAATIG 126 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+++EEIDA+ M + V L+S R+ A ++++ L L+ +A A Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ F++ +++ ++A M+ A+ +V G+ S +G Sbjct: 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ +V++I ++ Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267 >gi|260188552|ref|ZP_05766026.1| hypothetical protein MtubCP_21372 [Mycobacterium tuberculosis CPHL_A] gi|289449202|ref|ZP_06438946.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis CPHL_A] gi|289422160|gb|EFD19361.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis CPHL_A] Length = 280 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 112/261 (42%), Gaps = 1/261 (0%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 F+ + + + F + + V + + + + + + +G Sbjct: 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG- 66 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G Sbjct: 67 GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+++EEIDA+ M + V L+S R+ A ++++ L L+ +A A Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ F++ +++ ++A M+ A+ +V G+ S +G Sbjct: 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ +V++I ++ Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267 >gi|15610636|ref|NP_218017.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Rv] gi|15843112|ref|NP_338149.1| hypothetical protein MT3604 [Mycobacterium tuberculosis CDC1551] gi|31794676|ref|NP_857169.1| integral membrane protein YrbE4b [Mycobacterium bovis AF2122/97] gi|121639419|ref|YP_979643.1| integral membrane protein YrbE4b [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663364|ref|YP_001284887.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra] gi|148824707|ref|YP_001289461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis F11] gi|215405541|ref|ZP_03417722.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|215413413|ref|ZP_03422097.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 94_M4241A] gi|215429006|ref|ZP_03426925.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T92] gi|215432468|ref|ZP_03430387.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis EAS054] gi|215447833|ref|ZP_03434585.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis T85] gi|218755277|ref|ZP_03534073.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis GM 1503] gi|224991915|ref|YP_002646604.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253800542|ref|YP_003033543.1| hypothetical protein TBMG_03545 [Mycobacterium tuberculosis KZN 1435] gi|254234086|ref|ZP_04927411.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis C] gi|254366846|ref|ZP_04982887.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis str. Haarlem] gi|254552602|ref|ZP_05143049.1| hypothetical protein Mtube_19500 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260206867|ref|ZP_05774358.1| hypothetical protein MtubK8_21501 [Mycobacterium tuberculosis K85] gi|289555766|ref|ZP_06444976.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 605] gi|289576234|ref|ZP_06456461.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85] gi|289747336|ref|ZP_06506714.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|289752221|ref|ZP_06511599.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T92] gi|289755630|ref|ZP_06515008.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289759659|ref|ZP_06519037.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|289763680|ref|ZP_06523058.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis GM 1503] gi|294995730|ref|ZP_06801421.1| hypothetical protein Mtub2_14798 [Mycobacterium tuberculosis 210] gi|297636156|ref|ZP_06953936.1| hypothetical protein MtubK4_18620 [Mycobacterium tuberculosis KZN 4207] gi|297733156|ref|ZP_06962274.1| hypothetical protein MtubKR_18790 [Mycobacterium tuberculosis KZN R506] gi|298526980|ref|ZP_07014389.1| ABC-transporter integral membrane protein [Mycobacterium tuberculosis 94_M4241A] gi|306777850|ref|ZP_07416187.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu001] gi|306782581|ref|ZP_07420918.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu002] gi|306786399|ref|ZP_07424721.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu003] gi|306790768|ref|ZP_07429090.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu004] gi|306795298|ref|ZP_07433600.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu005] gi|306799486|ref|ZP_07437788.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu006] gi|306805332|ref|ZP_07442000.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu008] gi|306809518|ref|ZP_07446186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu007] gi|306969625|ref|ZP_07482286.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu009] gi|306973968|ref|ZP_07486629.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu010] gi|307081676|ref|ZP_07490846.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu011] gi|307086284|ref|ZP_07495397.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu012] gi|313660487|ref|ZP_07817367.1| hypothetical protein MtubKV_18785 [Mycobacterium tuberculosis KZN V2475] gi|2924437|emb|CAA17737.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B [Mycobacterium tuberculosis H37Rv] gi|13883458|gb|AAK47963.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31620273|emb|CAD95716.1| CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B [Mycobacterium bovis AF2122/97] gi|121495067|emb|CAL73553.1| Conserved hypothetical integral membrane protein yrbE4B [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599615|gb|EAY58719.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis C] gi|134152355|gb|EBA44400.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis str. Haarlem] gi|148507516|gb|ABQ75325.1| conserved hypothetical integral membrane protein YrbE4b [Mycobacterium tuberculosis H37Ra] gi|148723234|gb|ABR07859.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis F11] gi|224775030|dbj|BAH27836.1| hypothetical integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253322045|gb|ACT26648.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 1435] gi|289440398|gb|EFD22891.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 605] gi|289540665|gb|EFD45243.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis K85] gi|289687864|gb|EFD55352.1| integral membrane protein YrbE4b [Mycobacterium tuberculosis 02_1987] gi|289692808|gb|EFD60237.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis T92] gi|289696217|gb|EFD63646.1| integral membrane protein [Mycobacterium tuberculosis EAS054] gi|289711186|gb|EFD75202.1| hypothetical integral membrane protein yrbE4B [Mycobacterium tuberculosis GM 1503] gi|289715223|gb|EFD79235.1| integral membrane protein [Mycobacterium tuberculosis T85] gi|298496774|gb|EFI32068.1| ABC-transporter integral membrane protein [Mycobacterium tuberculosis 94_M4241A] gi|308213830|gb|EFO73229.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu001] gi|308324771|gb|EFP13622.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu002] gi|308329035|gb|EFP17886.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu003] gi|308332874|gb|EFP21725.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu004] gi|308336457|gb|EFP25308.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu005] gi|308340335|gb|EFP29186.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu006] gi|308344190|gb|EFP33041.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu007] gi|308348120|gb|EFP36971.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu008] gi|308352884|gb|EFP41735.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu009] gi|308356697|gb|EFP45548.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu010] gi|308360651|gb|EFP49502.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu011] gi|308364268|gb|EFP53119.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis SUMu012] gi|323717842|gb|EGB27033.1| hypothetical protein TMMG_03674 [Mycobacterium tuberculosis CDC1551A] gi|326905342|gb|EGE52275.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis W-148] gi|328460273|gb|AEB05696.1| hypothetical membrane protein yrbE4B [Mycobacterium tuberculosis KZN 4207] gi|328864232|gb|AEB53199.1| conserved integral membrane protein YRBE4B [Mycobacterium tuberculosis] Length = 280 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 112/261 (42%), Gaps = 1/261 (0%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 F+ + + + F + + V + + + + + + +G Sbjct: 8 RFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAITRYRKETVRLVAEMTLGAGALVMIG- 66 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 V V ++ +G VIA QG L G E + L + L +R + ++ + +A G Sbjct: 67 GTVGVAAFLTLASGGVIAVQGYSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIG 126 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A++G+M+++EEIDA+ M + V L+S R+ A ++++ L L+ +A A Sbjct: 127 AGATAQLGAMRVSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFT 186 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 ++ F++ +++ ++A M+ A+ +V G+ S +G Sbjct: 187 TVFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSVGVGVA 246 Query: 346 VTTCVVQSISIVIIIDSLFAI 366 V V S+ +V++I ++ Sbjct: 247 VGQAVRTSLIVVVVITLFISL 267 >gi|330994287|ref|ZP_08318215.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp. SXCC-1] gi|329758754|gb|EGG75270.1| Protein trigalactosyldiacylglycerol 1 [Gluconacetobacter sp. SXCC-1] Length = 300 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 91/248 (36%), Gaps = 5/248 (2%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 + + + F IG+ + + + + + K Sbjct: 25 QPEPENRGRLIALLGRFAPWLAAIGRLTRHQVRFTLLLIGAGWGTLRESLRPNSWRRPVK 84 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 + +RQ+ G + + + + G ++ Q A+ L G + ++ + +RE Sbjct: 85 YEFRATLRQVVSGGFLSIVI---TATLAGLMVVSQAAYWLGYAGMAQMTGSILVSVLVRE 141 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 I +L +++ GRSG + EIG M + E+ ++ G+D L+ PR +A + L Sbjct: 142 ISPILVGIILMGRSGMLSLTEIGMMVLGGEVRGLQARGIDPFLALVMPRTFAFTLGGFTL 201 Query: 271 TILANFSAIIGASIVIWKYYDIPF--AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 ++ +++ +V I FF + T + +K + +G+ A Sbjct: 202 GMIFAVVSLLMGFVVAHASGAITSSVWTFFFNVLAAMTTWDYLIIPLKFVLVGFFVGLGA 261 Query: 329 MKEGFAVG 336 G V Sbjct: 262 CISGLTVS 269 >gi|329114262|ref|ZP_08243024.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] gi|326696338|gb|EGE48017.1| ABC Transporter Permease Protein [Acetobacter pomorum DM001] Length = 298 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 94/245 (38%), Gaps = 5/245 (2%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 ++ +R + + IG+ + + VI + A + Sbjct: 26 AHKPAKRVPLHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 85 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++ + + GVS + +TG Q + L G + ++ + +REI Sbjct: 86 VTTMNNIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 142 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +L +++ GR+G E+G + I ++ +++++G+D +L+ PR A ++ L IL Sbjct: 143 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLLLVLPRTLAFTVAGFTLGIL 202 Query: 274 ANFSAIIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + S++I ++ I F + ++ + +K + +G+ Sbjct: 203 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAIIPLKFIMVGFVVGLGGCLT 262 Query: 332 GFAVG 336 G Sbjct: 263 GLTAT 267 >gi|258541977|ref|YP_003187410.1| ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256633055|dbj|BAH99030.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256636112|dbj|BAI02081.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256639167|dbj|BAI05129.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256642221|dbj|BAI08176.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256645276|dbj|BAI11224.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256648331|dbj|BAI14272.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256651384|dbj|BAI17318.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654375|dbj|BAI20302.1| ABC transporter permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 299 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 94/245 (38%), Gaps = 5/245 (2%) Query: 94 KNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFL 153 ++ +R + + IG+ + + VI + A + Sbjct: 27 AHKPAKRIPVHEWIRRKLAWIGRLVRRQARFFLVVLGAGWGVIFESFRSHAWRRTVRYEF 86 Query: 154 LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGV 213 ++ + + GVS + +TG Q + L G + ++ + +REI Sbjct: 87 ITTMNSIIGGGVSA---SLFAGMLTGVAAVSQVIYWLGLTGLAKMTGSILVNVVIREIAP 143 Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 +L +++ GR+G E+G + I ++ +++++G+D +L+ PR A ++ L IL Sbjct: 144 ILVGILLLGRNGMLSATELGLLTIGGQVRSMQSVGMDPFLMLVLPRTLAFTVAGFTLGIL 203 Query: 274 ANFSAIIGASIVIWKYYDIP--FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + S++I ++ I F + ++ + +K + +G+ Sbjct: 204 FSMSSLITGYVMSRISGVITNPIWTFLDDVAAAMSVTDYAVIPLKFIMVGFVVGLGGCLT 263 Query: 332 GFAVG 336 G Sbjct: 264 GLTAT 268 >gi|58040452|ref|YP_192416.1| ABC transporter permease [Gluconobacter oxydans 621H] gi|58002866|gb|AAW61760.1| Putative ABC transport system permease protein [Gluconobacter oxydans 621H] Length = 274 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 108/268 (40%), Gaps = 6/268 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 +++ H+G + + ++ + + + Q Sbjct: 9 RITMVRSMLVHLGYFSRTQMRFTLMMIGAGWGIMREATRLTTWRRTVRIEFWASLHQAVG 68 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G+ ++ + +TG I Q + L G + ++S + +REI +L V++ G Sbjct: 69 GGILS---TLVTAALTGFGIVAQTVYWLGFAGMAQMTGSILSTVLVREIAPVLVGVILLG 125 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RSG ++ E+G++ ++ A+ MG+D + PR A+ IS L ++ + +A++ Sbjct: 126 RSGMLMLTELGTLTTGGQMRAMTGMGIDPFISFLLPRSLAMTISGFTLGVIFSMTALLVG 185 Query: 283 SIVIWK--YYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 V +P F + S+ + F K F A+G+ + G V + Sbjct: 186 YAVCRVEDAITMPIWAFLDQVVSSVKPIDYFVIPAKFIFSGYAVGVCSCLSGMDVT-TED 244 Query: 341 SLGKKVTTCVVQSISIVIIIDSLFAIFY 368 L + + + +++I+ +F++ + Sbjct: 245 DLSSMLPRGFARGMLSIMVINVVFSVCF 272 >gi|218463600|ref|ZP_03503691.1| probable ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 191 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 5/180 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S R +GNW+S + + D +++ +S VDLS IT+IDT G L+ Sbjct: 17 STGSGQRVRLSGNWRSAYVHLVLRDFEKLLHQ--KSGDLTVDLSDITDIDTAGIWLLCRL 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 ++ + + +++ ++ +P+ + + IGK Sbjct: 75 KKEAEAAGRTVRFEGTNPHIDEMLAM-FSEEPAKPEPEPREKISLAARILAPIGKMTYDV 133 Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAV 181 ++ + +ILG + S++ Q+ ++GV VP+++L+SF+ GA+ Sbjct: 134 WDNLAAAMYILGSAVRGAQMKFGRGSGVSP--ASIVNQIDHMGVRAVPIILLMSFLIGAI 191 >gi|207110315|ref|ZP_03244477.1| hypothetical protein HpylH_14585 [Helicobacter pylori HPKX_438_CA4C1] Length = 113 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 59/111 (53%) Query: 254 ILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTG 313 L+ PR+ AL+I LPLL +A+ AI+G I D+ F + R H T + G Sbjct: 1 FLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVG 60 Query: 314 LIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLF 364 ++KAPF AI +V GF V + S+G+ T VV ++ +I +D+ F Sbjct: 61 IVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDACF 111 >gi|3123858|gb|AAC15953.1| hypothetical integral membrane protein [Campylobacter jejuni] Length = 133 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 47/97 (48%) Query: 275 NFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFA 334 + +I+G +V DI F F RF + +I GL KAP IG++A GF Sbjct: 2 DAISILGGMVVAKINLDISFGEFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFE 61 Query: 335 VGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAI 371 V + S+G T VV +I VI D+LF++ + Sbjct: 62 VKNTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTIM 98 >gi|68171321|ref|ZP_00544719.1| ABC transporter permease protein [Ehrlichia chaffeensis str. Sapulpa] gi|67999248|gb|EAM85900.1| ABC transporter permease protein [Ehrlichia chaffeensis str. Sapulpa] Length = 105 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%) Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI 324 +++P++ + A+ G IV ++ ++ GL+KA I Sbjct: 1 VAMPIVILCADLIGAYGGYIVGSYQLGYTSEMYIKGVIKFLHAKDVTLGLVKATVFGFII 60 Query: 325 GIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYF 369 + G+ + +G T VV S +I+ + + +FY Sbjct: 61 SFMGCYSGYYCSGGARGVGLATTYVVVVSSMFIILFNYIITVFYS 105 >gi|291287596|ref|YP_003504412.1| hypothetical protein Dacet_1692 [Denitrovibrio acetiphilus DSM 12809] gi|290884756|gb|ADD68456.1| protein of unknown function DUF140 [Denitrovibrio acetiphilus DSM 12809] Length = 258 Score = 97.4 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 97/239 (40%), Gaps = 3/239 (1%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 K + + +G+ + I + K RQ+Y+ GV Sbjct: 1 MKQIIHRLGRWAIDNSVFYYGYLGFTRKFIKGCFNRHLLNPSVKLVF---FRQIYFTGVQ 57 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 +P+ ++S V G + + QFGA+ D++ ++ ++ + ++ A+++ RS + Sbjct: 58 ILPMFSVVSIVIGLALVGGLTKFMVQFGAQDRVGDVLVLVTIKHLAPMVAAILLVLRSST 117 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 A+ AEI MK+N EID +R++ ++ L PRI + I+ L + + +++G +++ Sbjct: 118 AVTAEIALMKMNNEIDTLRSLSINPFIYLYIPRIASGIVCTGALATIFVYISLLGGYMIL 177 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKK 345 +I F + L+K + + + + V + Sbjct: 178 SFNLNISFGFLMQTIFDAFNFKIVLVFLMKIVLLGYFLMSLPIFSALQVHNSVTEIPIA 236 >gi|213027514|ref|ZP_03341961.1| toluene ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 152 Score = 97.4 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 76/148 (51%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMK 236 G V+ QG L+ + AE L+++ LRE+G ++ A++ AGR+GSA+ AEIG M+ Sbjct: 65 FIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMR 124 Query: 237 INEEIDAIRTMGLDFVRILISPRIWALI 264 E++ ++ M +D +R +ISPR WA + Sbjct: 125 ATEQLSSMEMMAVDPLRRVISPRFWAGV 152 >gi|296115253|ref|ZP_06833894.1| putative ABC transport system permease protein [Gluconacetobacter hansenii ATCC 23769] gi|295978354|gb|EFG85091.1| putative ABC transport system permease protein [Gluconacetobacter hansenii ATCC 23769] Length = 302 Score = 97.4 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 91/239 (38%), Gaps = 5/239 (2%) Query: 102 FFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMY 161 F IG+ + + + + + A S +RQ+ Sbjct: 38 RFLLRVAPWLAAIGRFVRHQVRFTLMLVGAGWGTLRESLRPNAWRRPVIFEFRSCLRQVI 97 Query: 162 YVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G+ ++ + + G ++ Q A+ L G + ++ + +REI +L +++ Sbjct: 98 AGGLIS---TVVTATLAGLMVVSQAAYWLGFAGMAQMTGSILVSVLVREITPILMGIILL 154 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 GRSG + +IG M +N ++ ++ GLD L+ PR +A ++ L I+ +++ Sbjct: 155 GRSGMLSLTQIGLMVLNGQVRTMQARGLDPFLTLVMPRAFAFMVGGFSLGIIFAVVSLLM 214 Query: 282 ASIVIWKYY--DIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVH 338 V + FF + T + +K + +G+ A G V + Sbjct: 215 GFFVAHATGAINSSVWTFFFNVLAAMTTWDYLIIPLKFLLVGFFVGLGACISGLTVSNN 273 >gi|209545500|ref|YP_002277729.1| hypothetical protein Gdia_3388 [Gluconacetobacter diazotrophicus PAl 5] gi|209533177|gb|ACI53114.1| protein of unknown function DUF140 [Gluconacetobacter diazotrophicus PAl 5] Length = 296 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 92/247 (37%), Gaps = 5/247 (2%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 + + IG+ + + + V+ + + + Sbjct: 21 PPVGALPHWLAAAAARVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVR 80 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 +RQ+ GV + + + G + Q A+ L G + ++ + +RE Sbjct: 81 DEFRLCLRQVVGGGVLS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVRE 137 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 I +L +++ GRSG + EIG + + ++ A++ GLD +L+ PR +A + L Sbjct: 138 IAPVLVGIILLGRSGMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTL 197 Query: 271 TILANFSAIIGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 IL A++ IV + FFS + + + +K + +G+ A Sbjct: 198 GILFATMALLMGFIVTHTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGA 257 Query: 329 MKEGFAV 335 G V Sbjct: 258 CITGLLV 264 >gi|162148733|ref|YP_001603194.1| putative ABC transport system permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787310|emb|CAP56904.1| putative ABC transport system permease protein [Gluconacetobacter diazotrophicus PAl 5] Length = 296 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 92/247 (37%), Gaps = 5/247 (2%) Query: 91 KKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFK 150 + + IG+ + + + V+ + + + Sbjct: 21 PPVGALPHWLAAAAARVLPPLARIGRLTRHQVRFALVLVGMGWGVLRESVRPNSWRRTVR 80 Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 +RQ+ GV + + + G + Q A+ L G + ++ + +RE Sbjct: 81 DEFRLCLRQVVGGGVLS---TLFTATLAGLTVVSQAAYWLGFAGMAQMTGSILVSVLVRE 137 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 I +L +++ GRSG + EIG + + ++ A++ GLD +L+ PR +A + L Sbjct: 138 IAPVLVGIILLGRSGMLTLTEIGMLTLGGQVRAMQAQGLDPFLLLVMPRTFAFTVGGFTL 197 Query: 271 TILANFSAIIGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 IL A++ IV + FFS + + + +K + +G+ A Sbjct: 198 GILFATMALLMGFIVTHTAGVMSMSVWTFFSDVLTAMSAWDFLVIPLKFVLVGFFVGLGA 257 Query: 329 MKEGFAV 335 G V Sbjct: 258 CITGLLV 264 >gi|313673540|ref|YP_004051651.1| hypothetical protein Calni_1580 [Calditerrivibrio nitroreducens DSM 19672] gi|312940296|gb|ADR19488.1| protein of unknown function DUF140 [Calditerrivibrio nitroreducens DSM 19672] Length = 258 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 11/236 (4%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKG----FLLSLIRQMYYVGVSGVPVV 171 + I +L + + + FK + +RQ+Y+ GV + VV Sbjct: 3 RTIYHLGKFFVDGFRVLKDYLLFCNKVLSRFLTFKILNPAIFMVTLRQVYFTGVQIIRVV 62 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++I+ + G + L GA + ++ +RE+ LTA++++ RS +A+ AE Sbjct: 63 VIIAIIFGLGLVGTLGKFLMNIGAYQKIGTIFVVVVIREVAPFLTALLLSLRSATAVGAE 122 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 I MK+ EI +I+ G+D L PRI+A ++ L ++ + +I ++ + Sbjct: 123 ISMMKLGSEIRSIKIHGIDEYSYLFLPRIFAGMVCSFSLAVIFSAVSITIGYFLLSFQLN 182 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 I F S + +IF + K + + + S +GK T Sbjct: 183 ITFDYMVSLIFDALNINDIFCFIYKTILFGFTLMTLPIF-------TSMGVGKATT 231 >gi|237757027|ref|ZP_04585479.1| ABC-type transport system involved in resistance to organic solvents, permease component [Sulfurihydrogenibium yellowstonense SS-5] gi|237690807|gb|EEP59963.1| ABC-type transport system involved in resistance to organic solvents, permease component [Sulfurihydrogenibium yellowstonense SS-5] Length = 137 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 1/131 (0%) Query: 127 SQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQG 186 S G + S KF + +++ M +GV+ P+++L F TG V+ + Sbjct: 6 SLIEHTGNITIFFLRTLLSFKKFP-KIKHILKYMEDIGVNAAPLIVLTGFFTGGVLVVET 64 Query: 187 AFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 +F AE L+S+ RE+ +L A+++ RSGSAI A IG+M+I E+IDA+ Sbjct: 65 YPTFHKFNAEFLMGALVSLSLARELSPVLVALLVTARSGSAIAANIGTMRITEQIDALEV 124 Query: 247 MGLDFVRILIS 257 M +D +R L+ Sbjct: 125 MAVDPMRYLVL 135 >gi|74316998|ref|YP_314738.1| ABC-type transport system permease [Thiobacillus denitrificans ATCC 25259] gi|74056493|gb|AAZ96933.1| ABC-type transport system ipermease component [Thiobacillus denitrificans ATCC 25259] Length = 264 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 104/260 (40%), Gaps = 3/260 (1%) Query: 104 YNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYV 163 NS +G K+V + + LG E + + +++Q+Y+ Sbjct: 1 MNSIAASLESLGAKVVGWFTVGYAMFSFLGKAGLLLLERETWN---RATFDVVVKQVYFT 57 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 V + V + + V +I FG F+ ++ + + E+ LTA+ +A R Sbjct: 58 AVQILHVFLGYALVISWLIITIILSTARDFGLTAFASEMTIRVLVLELLPFLTALFVALR 117 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 SGSAI E+ M++N E+DA+ + ++ PR+ ++S+ L LA A++ Sbjct: 118 SGSAINTEVALMQVNNELDALAHCKVPPMQFEFLPRLIGGVVSVVTLAGLAGLLALLLGY 177 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLG 343 + I+ F + + ++K+ A+ ++ + G + Sbjct: 178 LAIYGAGTAGFEPYTQTIAKIFDFGILAGLVVKSALFGLAVTLIPVTAGLETPKKLFMVP 237 Query: 344 KKVTTCVVQSISIVIIIDSL 363 V +++ ++ I+ + Sbjct: 238 VSVLRGMMRVFFAIVAIEVV 257 >gi|270595146|ref|ZP_06221505.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270318343|gb|EFA29500.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 133 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 78/133 (58%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 + + L++QM+ +GV + +++L G V+ QG L F AE Sbjct: 1 MLFGALIGKPQIRKHFPLLVKQMHVLGVQSLLIILLSGLFIGMVLGLQGYVVLVDFSAET 60 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 L+++ LRE+G ++TA++ AGR+GSA+ AEIG MK E++ ++ M +D +R +I+ Sbjct: 61 SJGQLVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRVIA 120 Query: 258 PRIWALIISLPLL 270 PR WA +IS+P+L Sbjct: 121 PRFWAGVISMPIL 133 >gi|114328087|ref|YP_745244.1| ABC transporter permease [Granulibacter bethesdensis CGDNIH1] gi|114316261|gb|ABI62321.1| ABC transporter permease protein [Granulibacter bethesdensis CGDNIH1] Length = 273 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 5/239 (2%) Query: 100 RSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQ 159 + + + IG+ + V+ G + + Q Sbjct: 7 PAQSFARVRLFLRVIGRGTRNMLRFLLIMVAASAGVVLEVGRPSCWRRTTRAAFGQTLHQ 66 Query: 160 MYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVM 219 GV + + + G + Q + L G + +++ + LRE+ +L ++ Sbjct: 67 AAGGGVIS---TLFTATLVGIAMISQAIYWLGFAGMVESTGTILATILLRELSPILVGII 123 Query: 220 IAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAI 279 + GRSG +++E+G + N I + G+D ++I PR A +S L ++ +A+ Sbjct: 124 LLGRSGMPMISELGMLSANGHIRTLEAQGIDPFILIIVPRTIAFTVSAFTLGMVFAVTAL 183 Query: 280 IGASIVIW--KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVG 336 F + + + + +K + +G+ + G + Sbjct: 184 CVGFAAATEEGLITQSLWGFLTSVTGSMSELDYIIIPLKLMVVGFLVGLSSCLTGLSAQ 242 >gi|148823178|ref|YP_001287932.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11] gi|148721705|gb|ABR06330.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis F11] Length = 141 Score = 93.1 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 59/134 (44%) Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 I EE+DA+R MG++ ++ L +PR+ A L + + +IGA + Sbjct: 1 MRTIREELDALRVMGINPIQALAAPRVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVS 60 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQS 353 + + + ++ +IKA G++A +G +VG +G+ V VV + Sbjct: 61 AGAWVTGLTTLTHTVDVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFA 120 Query: 354 ISIVIIIDSLFAIF 367 ++ +I+ + Sbjct: 121 FIVLFVINIVVTAV 134 >gi|167947559|ref|ZP_02534633.1| hypothetical protein Epers_13847 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 132 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 82/127 (64%) Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 QL FGA+I+ +L+ + +RE+G ++TA+++AGR+GSA A++GSM++NEE+DA+RT G Sbjct: 6 QLQMFGAQIYVANLVGLGMVREMGAMMTAIIMAGRTGSAYAAQLGSMQVNEEVDALRTFG 65 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 + + L+ PR +LI+ LPLL I ++ I+G IV DI + + L Sbjct: 66 ISPMEYLVLPRSLSLILMLPLLCIWSDVLGIVGGLIVAAALLDISLLHYLQQTQEAINLM 125 Query: 309 NIFTGLI 315 ++ TG+I Sbjct: 126 DVLTGMI 132 >gi|315635511|ref|ZP_07890777.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] gi|315480269|gb|EFU70936.1| ABC superfamily ATP binding cassette transporter, permease protein [Arcobacter butzleri JV22] Length = 91 Score = 91.2 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 51/91 (56%) Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 I+ D+ F F +R H+ L ++ G+ KA F AI I+ GF V ++ S+ Sbjct: 1 MIIASSSLDVTFIEFINRLHNEVPLKHLILGVFKALFFGFAIAIIGCYRGFQVQNNTTSI 60 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIFYFAIGI 373 GK T VV +I +VI+ID++F++ + +GI Sbjct: 61 GKFTTMSVVNAIFVVILIDAVFSVIFTQMGI 91 >gi|207109506|ref|ZP_03243668.1| hypothetical protein HpylH_09844 [Helicobacter pylori HPKX_438_CA4C1] Length = 137 Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 2/139 (1%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +GK IV+ N + + G+++ + + +F + L+ + G +P Sbjct: 1 MITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRF--CITPLLYHINESGFKVLP 58 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 V IL F+ G +A QGA QL GA + S+++ + L LREIG + +++AGRS S+ Sbjct: 59 VSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFT 118 Query: 230 AEIGSMKINEEIDAIRTMG 248 A+IG MKI EE+DA++TMG Sbjct: 119 AQIGVMKITEELDAMKTMG 137 >gi|251771004|gb|EES51588.1| probable ABC transporter, permease protein [Leptospirillum ferrodiazotrophum] Length = 211 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 99/205 (48%) Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 G+S +P++ +++ + GA + + +L + G + ++ + +G TA+++ Sbjct: 3 AGLSALPIITVVALLVGAGVVAETGIELPKLGIQNLVGTIVLHVIFGIVGPFATALIVIA 62 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 RS S + EIG+M+++ E+D I +G++ ++I+P I +I+S LT A+ G Sbjct: 63 RSTSGLAVEIGNMRVSGELDTIEMLGVNLSYLIITPNIIGIIVSTIALTFYFGIIAMAGG 122 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSL 342 + +P A L+++ L++ F I V++ G V + + Sbjct: 123 FAMALMGLSMPVATLVRMIEMNIRLSDLLLPLLEGLFYGLIISSVSVYHGLRVKRSAREV 182 Query: 343 GKKVTTCVVQSISIVIIIDSLFAIF 367 K+ +V ++++ + SL+ IF Sbjct: 183 PKETRLALVSALALSTVALSLYLIF 207 >gi|324999497|ref|ZP_08120609.1| hypothetical protein PseP1_12051 [Pseudonocardia sp. P1] Length = 263 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 100/244 (40%), Gaps = 4/244 (1%) Query: 133 GLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ 192 G+ F ++ G+ + + Y + F + +Q Sbjct: 17 GMAALLVTVFGSAIRNPVGYWRAAMLDFYTTVRRAALPMAAAIFGFLLFFSLVVVIFFNQ 76 Query: 193 FGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFV 252 GA L+ + R V + AV+++G +G+A+ A++G+ KI +E+DA+R MGLD V Sbjct: 77 VGAVSLGSALLFLYGFRAFTVFVVAVVVSGVAGAALTADLGARKIRDELDAMRVMGLDPV 136 Query: 253 RILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFT 312 R L+ PR+ ++++ L+ + + + I Y + ++ + + + Sbjct: 137 RELVVPRVVSMVVLTTLIVLPGLGVSAVALQIGASYYGHLAAVDYYDNLFAALVPLELGS 196 Query: 313 GLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIII----DSLFAIFY 368 ++ + I IV +G S +G+ V VV + + +++F + Sbjct: 197 VVLNCFLLGIMIAIVCCYKGLNASGGSIGVGRAVNQAVVICYVGLFVFQLAYNAVFLGLF 256 Query: 369 FAIG 372 +G Sbjct: 257 PEVG 260 >gi|167951062|ref|ZP_02538136.1| ABC-type toluene export protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 189 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 64/121 (52%) Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI 197 S ++ L +IRQ++++G + V+++ TG V+A Q L +FG+ Sbjct: 4 MLLSALLSLFRAPYQLEPVIRQLHFIGARSMLVIVISGLFTGMVLALQFHNTLERFGSVD 63 Query: 198 FSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILIS 257 +++ LRE+G ++ A+M+ GR+GSA+ AEIG M+ +E+I G ++ Sbjct: 64 LLGSAVALALLRELGPVMAALMVVGRAGSAMCAEIGIMRTSEQIRCAGVHGDRSPQVHYC 123 Query: 258 P 258 P Sbjct: 124 P 124 >gi|121594930|ref|YP_986826.1| ABC-type transport system permease [Acidovorax sp. JS42] gi|222110419|ref|YP_002552683.1| hypothetical protein Dtpsy_1216 [Acidovorax ebreus TPSY] gi|120607010|gb|ABM42750.1| ABC-type transport system ipermease component [Acidovorax sp. JS42] gi|221729863|gb|ACM32683.1| protein of unknown function DUF140 [Acidovorax ebreus TPSY] Length = 269 Score = 81.2 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 90/234 (38%), Gaps = 7/234 (2%) Query: 107 FKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVS 166 + L + V + LG V+ +S + + L R MY Sbjct: 11 PRRLWAQARRWAVAWWR-----IIYLGAVVMVLMLSPSSYGRATRWR--LARHMYQDTAP 63 Query: 167 GVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGS 226 + +++ + VI + +G ++++++ + + E+ L A+ +A R+ Sbjct: 64 ILLGFTVLAALISLVITRIVVVTALSYGLSRYALEMVIRVLVLELIPLTAALFVAMRATI 123 Query: 227 AIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVI 286 ++ M+ + + A+R G D VR+ + PR+ A + + L L+ A++ A + + Sbjct: 124 PNGTQLALMRQSGHLQALRQRGADPVRMELLPRVVAGVYASITLAALSCVVALVMAYLGV 183 Query: 287 WKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN 340 + V+ F ++K F + A+ ++ M G + Sbjct: 184 YGLNTAGLPVYTRMFGHVFAPQITLVFVLKTVFFSLAVALIPMASGLYESGDAR 237 >gi|196229086|ref|ZP_03127952.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Chthoniobacter flavus Ellin428] gi|196227367|gb|EDY21871.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Chthoniobacter flavus Ellin428] Length = 261 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 102/242 (42%), Gaps = 4/242 (1%) Query: 130 HILGLVISNTGEFCASSYKFKGFL--LSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGA 187 +LG + S + + +RQ+ ++ +F+ G A Sbjct: 13 SLLGAIFSVGARCLPRVLLGRATIVERETVRQILSFQSGTAFASVMTAFIYGLAAAYAVL 72 Query: 188 FQLSQFGA-EIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRT 246 + A E + + L + A ++ + + ++I SM+ ++E+DA+ Sbjct: 73 SNTASPAAFETLVLPQLGGAFLHYVVPFAIANLVVLKGVVGMTSDITSMRASQEVDALEA 132 Query: 247 MGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTAT 306 +GL ++ +PR ALI++ P L +L +SA +GA +V+W F F + F S+ T Sbjct: 133 VGLHPAEMIFAPRALALIVTAPALAVLGVYSACLGAWLVVWLTAGTGFVAFVAAFASSVT 192 Query: 307 LANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS-LGKKVTTCVVQSISIVIIIDSLFA 365 + + K A A+ +++ GF +G T+ V ++ I+++ L + Sbjct: 193 SIGMLFAVGKLAITALAMSLISGYFGFVGARAEQGFVGHITTSAVAMAVFSTIVVNLLLS 252 Query: 366 IF 367 + Sbjct: 253 LL 254 >gi|307608999|emb|CBW98412.1| hypothetical protein LPW_02641 [Legionella pneumophila 130b] Length = 251 Score = 80.4 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 16/256 (6%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I+ F++ LG ++ +T + K + + +YY G V ++ I Sbjct: 9 KPIITFLHSLELAFRFLGHLVHSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + GA ++Q L F + ++ + EI +L ++ ++ +V Sbjct: 67 ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120 Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 + + + + P I + I+ LL + F+ + Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTFHFMLGF 175 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F S S+ TL ++ ++K + +G+ + + + L K V+ + + Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235 Query: 353 SISIVIIIDSLFAIFY 368 +II + + Sbjct: 236 GSFWLIIASMYITLTF 251 >gi|54293187|ref|YP_125602.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens] gi|53753019|emb|CAH14462.1| hypothetical protein lpl0233 [Legionella pneumophila str. Lens] Length = 251 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 16/256 (6%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I+ F++ LG ++ +T + K + + +YY G V ++ I Sbjct: 9 KPIITFLHSIELAFRFLGHLVHSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + GA ++Q L F + ++ + EI +L ++ ++ +V Sbjct: 67 ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120 Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 + + + + P I + I+ LL + F+ + Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVFAIFFSFYLTFHFMLGF 175 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F S S+ TL ++ ++K + +G+ + + + L K V+ + + Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235 Query: 353 SISIVIIIDSLFAIFY 368 +II + + Sbjct: 236 GSFWLIIASMYITLTF 251 >gi|54296206|ref|YP_122575.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris] gi|148358387|ref|YP_001249594.1| putative ABC transport system permease [Legionella pneumophila str. Corby] gi|296105737|ref|YP_003617437.1| probable ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] gi|53749991|emb|CAH11379.1| hypothetical protein lpp0232 [Legionella pneumophila str. Paris] gi|148280160|gb|ABQ54248.1| probable ABC transport system permease protein [Legionella pneumophila str. Corby] gi|295647638|gb|ADG23485.1| probable ABC transport system permease protein [Legionella pneumophila 2300/99 Alcoy] Length = 251 Score = 80.0 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 89/256 (34%), Gaps = 16/256 (6%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I+ F++ LG ++ +T + K + + +YY G V ++ I Sbjct: 9 KHIITFLHSLELAFRFLGHLVDSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + GA ++Q L F + ++ + EI +L ++ ++ +V Sbjct: 67 ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120 Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 + + + + P I + I+ LL + + + Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTFHFMLGF 175 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F S S+ TL ++ ++K + +G+ + + + L K V+ + + Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235 Query: 353 SISIVIIIDSLFAIFY 368 +II + + Sbjct: 236 GSFWLIIASMYITLTF 251 >gi|52840425|ref|YP_094224.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627536|gb|AAU26277.1| probable ABC transport system permease protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 251 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 89/256 (34%), Gaps = 16/256 (6%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K I+ F++ LG ++ +T + K + + +YY G V ++ I Sbjct: 9 KPIITFLHSLELAFRFLGHLVHSTIKVI--FGKLSIVWPNTLEMIYYSGARLVILLSFIG 66 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + GA ++Q L F + ++ + EI +L ++ ++ +V Sbjct: 67 ILLGATVSQTVYALLKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMV------ 120 Query: 236 KINEEIDAIRTMGLDF---VRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 + + + + P I + I+ LL + + + Sbjct: 121 -----NTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSAIFFSFYLTFHFMLGF 175 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQ 352 F S S+ TL ++ ++K + +G+ + + + L K V+ + + Sbjct: 176 TNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTR 235 Query: 353 SISIVIIIDSLFAIFY 368 +II + + Sbjct: 236 GSFWLIIASMYITLTF 251 >gi|41406205|ref|NP_959041.1| hypothetical protein MAP0107 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394553|gb|AAS02424.1| hypothetical protein MAP_0107 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 119 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 38/112 (33%) Query: 261 WALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFM 320 A +I++ L I + +V + F + +I ++K Sbjct: 1 MASVIAVIPLYIACLAVTYLTCQVVANIISGGSIGPYLHYFTMMLSAKDIAYSVLKCVVF 60 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFAIG 372 V GF +G + SI++VI+++ L + ++I Sbjct: 61 VWLSSTVQCYYGFYAAGGPEGVGVAAGHAMRASITVVIMVNMLLTMALWSID 112 >gi|320102563|ref|YP_004178154.1| hypothetical protein Isop_1016 [Isosphaera pallida ATCC 43644] gi|319749845|gb|ADV61605.1| protein of unknown function DUF140 [Isosphaera pallida ATCC 43644] Length = 290 Score = 77.3 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 96/251 (38%), Gaps = 17/251 (6%) Query: 86 SFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCAS 145 ++ + + P++ ++ + IG+ + I+ + + + T Sbjct: 8 KRSNPSQPRRSLPRKGRGFDPLRRSLAAIGRGTLATISYLGALKLLTLATLRATIRPPRD 67 Query: 146 SYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSI 205 + + ++ Q+ ++ G+P+ +L+ G +A Q + + A + ++ Sbjct: 68 APPLR---RAVSAQLAWMLSMGLPLTVLVHVSLGGFLAMQSYYGATFILA---TGPVVLT 121 Query: 206 LQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALII 265 +R + ++ +++ G G+ AE+ A + + L + R WA +I Sbjct: 122 GLIRNLSPVMAGLILVGMVGTRCTAEL----------ARQGFRISP-AYLTAARFWAAVI 170 Query: 266 SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIG 325 + P+L + + + + V +++ + +F ++ L+K A Sbjct: 171 AGPILGLAGTLTGSLAGAAVAYRWLGVSVQGYFEFGWEMVWFRDVVGLLVKGMLFGGATV 230 Query: 326 IVAMKEGFAVG 336 ++A EG + Sbjct: 231 LIAALEGLRIT 241 >gi|120610497|ref|YP_970175.1| ABC-type transport system permease [Acidovorax citrulli AAC00-1] gi|120588961|gb|ABM32401.1| ABC-type transport system ipermease component [Acidovorax citrulli AAC00-1] Length = 266 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 81/213 (38%), Gaps = 2/213 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG V++ +S +F L R MY + + + V+ Sbjct: 29 IVHLGAVVAVLMLSPSSYGRF--TRARLARHMYLDTAPLLLGFTALVALICLVVTHIVVI 86 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +G +++ ++ + + E+ L A+ +A R+ ++ M+ + DA+R G Sbjct: 87 TARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQLALMRQSGHWDALRARG 146 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 D VR+ + PR+ A + + L L+ A++ A + ++ + F T Sbjct: 147 ADPVRVELLPRVVAGMYASITLAALSCVVALVMAYLGVYGASTAGVPAYTRMFGQVFTPP 206 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 ++K + A+ ++ M G + Sbjct: 207 LTLLFVLKTLLFSLAVALIPMAAGLHATGDPRA 239 >gi|296161924|ref|ZP_06844724.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1] gi|295887800|gb|EFG67618.1| hypothetical protein BCh11DRAFT_5991 [Burkholderia sp. Ch1-1] Length = 218 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 4/158 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V GNW P + +++ + Q +D S + DT GA L+ + Sbjct: 40 VLAIIGNWTLPHYDTLR---ALSVERVTQDAITSLDFSRLGGHDTAGAALLAQVLGPERL 96 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCS 127 + L + +L+ K + N L IG +++ + + + Sbjct: 97 QSLLHDATGLDHDRLALLDAVVLAVGKVAGQPVTRRRNGVIELLERIGAAVLRLAHRTVA 156 Query: 128 QAHILGLVI-SNTGEFCASSYKFKGFLLSLIRQMYYVG 164 +GLV+ S C + + L R+ + G Sbjct: 157 LLGFIGLVLESLMLAACRPKARPRRTEHLLQRESCFSG 194 >gi|264677704|ref|YP_003277610.1| ABC transporter permease [Comamonas testosteroni CNB-2] gi|262208216|gb|ACY32314.1| ABC-type transport system ipermease component [Comamonas testosteroni CNB-2] Length = 267 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 85/221 (38%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + L + S K L +QM+ + + Sbjct: 12 GRIWAALGAQALAWWRSIYLTAVLLVLVSSPSSYRKRGRAMLAQQMFAQTAPILTGFTAL 71 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + AVIA+ +G +++DL+ + + E+ L A+ +A R ++ Sbjct: 72 AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++ ++ +T G+D VR + PR A + + L L+ A++ + ++ + F Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAITLAALSCIVALVTVYLSVYGFSLAGF 191 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 + F T + ++K F + + ++ + Sbjct: 192 GAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYT 232 >gi|213023205|ref|ZP_03337652.1| hypothetical protein Salmonelentericaenterica_11695 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 105 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%) Query: 268 PLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA-NIFTGLIKAPFMACAIGI 326 PLLTI+ I G S+V + I F+S + ++ LIK+ A + Sbjct: 1 PLLTIIFVAVGIWGGSLVGVSWKGIDAGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTW 60 Query: 327 VAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFYFA 370 +A+ G+ S + + T VV + V+ +D + F Sbjct: 61 IALFNGYDAIPTSAGISRATTRTVVHASLAVLGLDFVLTALMFG 104 >gi|32472426|ref|NP_865420.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica SH 1] gi|32443662|emb|CAD73104.1| sulfate transport ATP-binding protein cysA [Rhodopirellula baltica SH 1] Length = 527 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 91/271 (33%), Gaps = 26/271 (9%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + G + + + K L + VG V ++I+ Sbjct: 257 LRRGAERFLDSTGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVGGPSAWVYLIIAG 316 Query: 177 VTGAVIAQQGAFQLS--------QFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAI 228 + F L Q + + R + +L V+IA R G+A+ Sbjct: 317 LIAGFTT--TYFTLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAARCGAAV 374 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G + ++DA RT+G+ L+ P + A +I+ P+L +A ++ + + Sbjct: 375 AADVGVKQYGGQVDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWISRVTFNF 434 Query: 289 YYDIPFAVFFSR-FHSTATLANIFTGLI-----------KAPFMACAIGIVAMKEGFAVG 336 + F+ + F T +I K + +G Sbjct: 435 SHPEIGVHFWQQHFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYHQGITPK 494 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + +T V+ + V+++ + A+ Sbjct: 495 HSAGDVSHCITATVLWTTLYVLVVHFVVALL 525 >gi|327538488|gb|EGF25152.1| membrane protein containing ABC transporter-like domain [Rhodopirellula baltica WH47] Length = 527 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 93/271 (34%), Gaps = 26/271 (9%) Query: 121 FINDSCSQAHILGLVISNTGEFCASSY----KFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + G + + + K L + VG V ++I+ Sbjct: 257 LRRGAERFLDSTGRSLVAAARLPWDARPVVPRMKWAGRFLAHYLRLVGGPSAWVYLIIAG 316 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDL--------MSILQLREIGVLLTAVMIAGRSGSAI 228 + F L +++ L + R + +L V+IA R G+A+ Sbjct: 317 LIAGFTT--TYFTLRFLPFRLYTQPLLIDELLSSIGFALYRILVPVLATVLIAARCGAAV 374 Query: 229 VAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWK 288 A++G + ++DA RT+G+ L+ P + A +I+ P+L +A ++ + + Sbjct: 375 AADVGVKQYGGQVDAFRTLGIRAPAYLLIPILAAFLIATPILEWIAFTASHWISRVTFNF 434 Query: 289 YYDIPFAVFFSR-FHSTATLANIFTGLI-----------KAPFMACAIGIVAMKEGFAVG 336 + F+ + F T +I K + +G Sbjct: 435 SHPEIGVHFWQQHFFRAITPDTTGGSIITWWKGWDWVLAKNLLCGFGTAAIGYHQGITPK 494 Query: 337 VHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 + + +T V+ + V+++ + A+ Sbjct: 495 HSAGDVSHCITATVLWTTLYVLVVHFVVALL 525 >gi|299530299|ref|ZP_07043724.1| ABC-type transport system ipermease component [Comamonas testosteroni S44] gi|298721670|gb|EFI62602.1| ABC-type transport system ipermease component [Comamonas testosteroni S44] Length = 267 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 86/221 (38%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + L + S K L +QM+ + + Sbjct: 12 GRIWAALGAQALAWWRSIYLTAVLLVLVMSPSSYQKHGRAMLAQQMFAQTAPILTGFTAL 71 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + AVIA+ +G +++DL+ + + E+ L A+ +A R ++ Sbjct: 72 AALLCAVIARIVIVTAQSYGLSRYALDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M++ ++ +T G+D VR + PR A + + L L+ A++ + ++ + F Sbjct: 132 MRMQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAV 335 A + F T + ++K F + + ++ + Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVMPLASAMYT 232 >gi|221068184|ref|ZP_03544289.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] gi|220713207|gb|EED68575.1| protein of unknown function DUF140 [Comamonas testosteroni KF-1] Length = 267 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 84/213 (39%) Query: 115 GKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILI 174 G+ + + + L + S K L +QMY + + Sbjct: 12 GRIWAALGAQALAWWRSIYLTAMLLVLISSPSSYQKHGRAMLAQQMYAQTAPILTGFTAL 71 Query: 175 SFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + + AVIA+ +G +++DL+ + + E+ L A+ +A R ++ Sbjct: 72 AALLCAVIARIVIVTAQSYGLSRYAMDLVVRVMVIELIPLTAALFVAMRCTIPAGVQVVQ 131 Query: 235 MKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPF 294 M+ ++ +T G+D VR + PR A + + L L+ A++ + ++ + F Sbjct: 132 MRTQGQLAKWKTQGIDPVRAALVPRAAAGVFAAVTLAALSCIVALVTVYLSVYGFSLAGF 191 Query: 295 AVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 A + F T + ++K F + + ++ Sbjct: 192 AAYTRIFGQIFTPSLTLVFVLKTWFFSLTVAVM 224 >gi|326316567|ref|YP_004234239.1| hypothetical protein Acav_1754 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373403|gb|ADX45672.1| protein of unknown function DUF140 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 266 Score = 74.2 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 4/229 (1%) Query: 117 KIVKFINDSCSQAHILGLVISN----TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVI 172 + + A ++ + S + L R MY + Sbjct: 11 WTDRLWRAARGWALAWWRIVYLGAVVAVLMLSPSSYGRSTRARLARHMYIDTAPLLLGFT 70 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 + + V+ +G +++ ++ + + E+ L A+ +A R+ ++ Sbjct: 71 ALVALICLVVTHIVVVTARSYGLSHYALQMVVRVLVLELIPLTAALFVALRTTIPGGTQL 130 Query: 233 GSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDI 292 M+ + DA+R G D VR+ + PR+ A I + L L+ A++ A + ++ Sbjct: 131 ALMRRSGHWDALRARGADPVRVELLPRVVAGIYASITLAALSCVVALVMAYLGVYGASTA 190 Query: 293 PFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNS 341 + F T +K + A+ ++ M G + Sbjct: 191 GVPAYTRMFGQVFTPPVTLLFALKTLLFSLAVALIPMAAGLHATGDPRA 239 >gi|149918279|ref|ZP_01906770.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis pacifica SIR-1] gi|149820805|gb|EDM80214.1| amino acid ABC transporter, ATP-binding protein [Plesiocystis pacifica SIR-1] Length = 561 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 22/295 (7%) Query: 78 IEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVIS 137 + ++ +++ +K + + K ++ + V++ Sbjct: 257 AAHVGDQMAERLGRELTPEKSDDARSKGLLARAAGSLASKASGALDAILGGLEVGPRVLA 316 Query: 138 NTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQ---FG 194 G F ++RQ ++S + G + L Sbjct: 317 QLGRALLRPRDFAEVFGPVLRQAL---WRPAAFFAVVSTLIGFTLLYILHRSLGGGELPL 373 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 L+ + + + L+ ++ A S +AIVA +G M + + A+R +G+ R Sbjct: 374 RPDRVFSLIGSMHVIALAPPLSGILFAATSANAIVAWLGGMSLTRQTTALRALGIGESRY 433 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF-SRFHSTATLANI--- 310 L P L+ + L L + G + + + A+I Sbjct: 434 LWVPAWLGLVGAYLALAALFTLGMLGGGVLYVVFAVPEIGDPSTRWQLAWELLTADIVDP 493 Query: 311 --------FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIV 357 L A I A+ +G + + T +V+S+ +V Sbjct: 494 PPERAVFRVRALGLGLAYALGIASDAVAKGARDKHSAQDV----TVAMVRSVMVV 544 >gi|121607549|ref|YP_995356.1| ABC-type transport system permease [Verminephrobacter eiseniae EF01-2] gi|121552189|gb|ABM56338.1| ABC-type transport system ipermease component [Verminephrobacter eiseniae EF01-2] Length = 287 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 85/206 (41%), Gaps = 2/206 (0%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 LG V+ +S + +L R++Y +P +++ + V+ + Sbjct: 52 IFYLGAVVLVLALSPSSYGPGRRQ--ALARRLYLDTAPVLPGFTVLAALISLVLTRIVVV 109 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMG 248 +G ++++++ + + E+ L A+ +A R A++ ++ + ++DA+ G Sbjct: 110 TALSYGLSRYALEMVIRVLVLELIPLTAALFVAMRCTIGHGAQLAQLRQSGQLDALARQG 169 Query: 249 LDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLA 308 LD VR + PR A + + L L++ A++ + ++ + F + Sbjct: 170 LDPVRTELLPRAIAGVFACVTLAALSSVVALVLVYLGVYGLNGAGLPGYTRMFGQVFSPG 229 Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFA 334 +K F + A+ ++ M G Sbjct: 230 VTLVLALKTLFFSLAVALIPMGAGLY 255 >gi|160898358|ref|YP_001563940.1| ABC-type transport system permease [Delftia acidovorans SPH-1] gi|160363942|gb|ABX35555.1| ABC-type transport system ipermease component [Delftia acidovorans SPH-1] Length = 267 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 4/206 (1%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMY-YVGVSGVPVVILISFVTGAVIAQQGAFQ 189 LG V+ +S +G ++ Q+Y G + L + + + Sbjct: 30 YLGAVLLVLAMSPSSYR--RGARRAMAHQIYVQTGPILLGFTALAALLCAVITRIVIVTA 87 Query: 190 LSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL 249 L +G ++++++ + + E+ L A+ +A R I ++ ++ A + G Sbjct: 88 L-SYGLSRYALEMVVRVLVIELIPLTAALFVAMRCTIPNGTLIAQLRARGQLQAWQERGS 146 Query: 250 DFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLAN 309 D +R+ + PR + + L +L+ A++ + ++ + + F T A Sbjct: 147 DPLRMALVPRAAGGVFASVTLAVLSCVVALVTVYLSVYGFTLAGLPGYTRIFGQIFTPAV 206 Query: 310 IFTGLIKAPFMACAIGIVAMKEGFAV 335 ++K F + + I+ M G Sbjct: 207 TLVFVLKTWFFSLTVAIMPMASGLYA 232 >gi|134094912|ref|YP_001099987.1| hypothetical protein HEAR1705 [Herminiimonas arsenicoxydans] gi|133738815|emb|CAL61862.1| putative ABC-type transport system involved in resistance to organic solvents, permease component [Herminiimonas arsenicoxydans] Length = 258 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 104/251 (41%), Gaps = 7/251 (2%) Query: 114 IGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVIL 173 +G+ +++++ G+++ + A+ + ++ Q+ + + + Sbjct: 1 MGRAMLRWLIGGWRIVLF-GMLVLSLSFSPATYQRDNRH--AIAYQIVLGTTANLVWFSV 57 Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 ++ + ++ + +G ++++++ + + E+ L A+ +A R E+ Sbjct: 58 LTALASLILIRIVVVTALSYGLSKYALEMVVRVLVLELIPLTAALFVALRRTLPDGVELA 117 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIP 293 M+ E+++++ G+D +R PR A + S+ +L ++ ++I A + I+ + Sbjct: 118 EMRARGELESLQRQGIDPIRREFFPRAVAGVFSVLMLAAVSCVLSLILAYLSIYGFTHWA 177 Query: 294 FAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSN--SLGKKVT--TC 349 A + A L+K F + A+ ++ M + S K Sbjct: 178 LAGYTRVVGQIFNPAVSMIFLLKTLFFSLAVSLIPMASSLYDTRSTQLHSRSKAANELAA 237 Query: 350 VVQSISIVIII 360 +V+ ++++I Sbjct: 238 MVRLFFVILLI 248 >gi|153006504|ref|YP_001380829.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5] gi|152030077|gb|ABS27845.1| hypothetical protein Anae109_3665 [Anaeromyxobacter sp. Fw109-5] Length = 160 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 44/158 (27%), Gaps = 11/158 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G R +G+W I + + + SA+ +DT GA L+ Sbjct: 12 EDGA--VRCSGSWTIDRIGRVERALRGLAWPRGAAVVVD--ASAVGSMDTAGAWLLKRTA 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + + + +L+ + P+ + G+ K Sbjct: 68 RGLERSGRTVTLR-LRPEHEALLEVVTSSGVVAAPPRARDRP----RVLATFGRGAWKAA 122 Query: 123 NDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM 160 + G + + + +++ + Sbjct: 123 RELGGLVTFFGEITVTAARARTGPLRVR--WRQVLQHV 158 >gi|291446775|ref|ZP_06586165.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291349722|gb|EFE76626.1| ABC-transporter integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 113 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 51/98 (52%) Query: 219 MIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSA 278 +I+G GSAI A++GS KI EE+DA+ MG+ ++ L+ PR+ A ++ LL L + Sbjct: 16 VISGAPGSAICADLGSRKIREELDAMEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVG 75 Query: 279 IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIK 316 +G D + + F + A L +++ K Sbjct: 76 TLGGYFFNVIMQDGTPGAYLASFSALAQLPDLYISEFK 113 >gi|152982121|ref|YP_001353647.1| ABC-type transport system, permease component [Janthinobacterium sp. Marseille] gi|151282198|gb|ABR90608.1| ABC-type transport system, permease component [Janthinobacterium sp. Marseille] Length = 271 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 82/222 (36%), Gaps = 3/222 (1%) Query: 106 SFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGV 165 G V ++ + + + + ++ Q+ Sbjct: 6 PVPQTIVRTGGAAVGWLLGGWRILLFG---VIVLSLTFSPTTYKREHRYAIAHQLVLGTS 62 Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 + + L+S + ++ + +G +++D++ + + E+ L A+ +A R Sbjct: 63 TNLIWFSLLSSLISVILIRIVMVTALSYGLSKYALDMVVRMLVLELIPLTAALFVALRRT 122 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 E+ M+ ++ A+R G+D +R PR A I S+ +L ++ A+I + Sbjct: 123 LPDGVELAEMRRRGDLLAMRQQGVDPIRTEFFPRAIAGIFSVWMLAAVSCVLALILTYLS 182 Query: 286 IWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 I+ + A + + L+K F + A+ ++ Sbjct: 183 IYGFTQWALADYTRVVGQIFNPSVSMIFLLKTLFFSLAVSLI 224 >gi|121604691|ref|YP_982020.1| ABC-type transport system permease [Polaromonas naphthalenivorans CJ2] gi|120593660|gb|ABM37099.1| ABC-type transport system ipermease component [Polaromonas naphthalenivorans CJ2] Length = 267 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 95/235 (40%), Gaps = 6/235 (2%) Query: 103 FYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYY 162 S+ G+ ++ + H LG VI + S + L L R +Y Sbjct: 3 PSASWHRRLTRTGQAAQQWFIEWWQLIH-LGAVILVL--TLSPSSYRRENRLVLGRHIYM 59 Query: 163 VGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAG 222 + L+ + VI + +G +++ ++ + + E+ L A+ +A Sbjct: 60 STAPILLGFSLLCALVTVVITRIVMVTALSYGLSQYALQVVIRVLVLELIPLSAALFVAL 119 Query: 223 RSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA 282 R AE+ +M+ + E+D +R G++ +R + PR+ A + S L L+ A++ A Sbjct: 120 RCTIPDGAELTAMQASGELDEMRRQGVEPIRREVLPRVVAGMFSGITLAALSCVVAVMVA 179 Query: 283 SIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV---AMKEGFA 334 + ++ + AV+ F T A ++K F A+ ++ + G Sbjct: 180 YVAVYGFAVSGLAVYTRLFGQVFTPAVTLIFVLKTVFFCLAVSLIPMASALYGMR 234 >gi|307777742|dbj|BAJ21267.1| ABC transporter permease [Pseudomonas aeruginosa] Length = 66 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%) Query: 309 NIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIFY 368 N+ G+IK+ A + +A+ +G+ S + + T VV + V+ +D + Sbjct: 3 NVLNGVIKSIVFAFVVTWIAVYQGYDCEPTSEGISRATTRTVVYASLAVLGLDFILTALM 62 Query: 369 FA 370 F Sbjct: 63 FG 64 >gi|330826019|ref|YP_004389322.1| hypothetical protein Alide2_3477 [Alicycliphilus denitrificans K601] gi|329311391|gb|AEB85806.1| protein of unknown function DUF140 [Alicycliphilus denitrificans K601] Length = 278 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 73/186 (39%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 L RQM + ++ + VI +G ++++++ + + Sbjct: 54 RPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMVIRVLV 113 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 E+ L A+ +A R+ ++ ++ + A+R G D VR+ + PR+ A + + Sbjct: 114 LELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAGVHASI 173 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L L+ A++ A + ++ + + F T + +K + A+ ++ Sbjct: 174 TLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLAVALIP 233 Query: 329 MKEGFA 334 M G Sbjct: 234 MASGLY 239 >gi|315122739|ref|YP_004063228.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496141|gb|ADR52740.1| ABC transporter [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 147 Score = 67.3 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 54/98 (55%), Positives = 72/98 (73%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SENG+ VFR G+W+S EIS+I+ +++ INKS Q D AIVDL ITEIDTIG I+YF Sbjct: 18 SENGVKVFRLTGSWRSAEISKISKGILITINKSTQEDLAIVDLLEITEIDTIGVATIIYF 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 EKY GKI+LQG++ H+EQLFS++S K+K + + Sbjct: 78 TEKYRGKIQLQGMTAHMEQLFSIMSLNPNNKLKQKNQK 115 >gi|241764467|ref|ZP_04762489.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] gi|241366102|gb|EER60693.1| protein of unknown function DUF140 [Acidovorax delafieldii 2AN] Length = 266 Score = 66.9 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 81/222 (36%), Gaps = 4/222 (1%) Query: 120 KFINDSCSQAHILGLVISNTGEFCASSYKF----KGFLLSLIRQMYYVGVSGVPVVILIS 175 + A G ++ + +L R +Y + +++ Sbjct: 13 RLWRTLRRWALAWGRIVYLGAVVLVLVLSPSSYTRSARATLARHVYLDTAPILTGFTVLA 72 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSM 235 + VI + +G ++++++ + + E+ L + +A R ++ + Sbjct: 73 ALLCLVITRIVVVTALSYGLSRYALEMVIRVLVLELIPLTATLFVAMRCTIPAGTQLALL 132 Query: 236 KINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFA 295 + + DA+R G D VR+ + PR+ A + + L L+ A++ A + ++ + Sbjct: 133 RQSGRFDALRAHGGDPVRMELLPRVAAGVFASITLAALSCVVALVMAYLSVYGFNLAGLP 192 Query: 296 VFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGV 337 + F + A +K F + A+ ++ G Sbjct: 193 SYTRMFGHVFSPAVTLVFSLKTLFSSLAVALIPTTAGMYDAG 234 >gi|319762168|ref|YP_004126105.1| hypothetical protein Alide_1457 [Alicycliphilus denitrificans BC] gi|317116729|gb|ADU99217.1| protein of unknown function DUF140 [Alicycliphilus denitrificans BC] Length = 271 Score = 66.5 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 73/186 (39%) Query: 149 FKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQL 208 L RQM + ++ + VI +G ++++++ + + Sbjct: 47 RPAARERLARQMLADTAPILLGFTALAALLSLVITHIVVVTALSYGLTRYALEMVIRVLV 106 Query: 209 REIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 E+ L A+ +A R+ ++ ++ + A+R G D VR+ + PR+ A + + Sbjct: 107 LELIPLTAALFVAMRTTIPSGVQLARLRQTGRLQALRERGADPVRMELLPRVLAGVHASI 166 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVA 328 L L+ A++ A + ++ + + F T + +K + A+ ++ Sbjct: 167 TLAALSCAVALVMAYLGVYGFNTAGLPAYTRMFGQVFTPSITLVFALKTLLFSLAVALIP 226 Query: 329 MKEGFA 334 M G Sbjct: 227 MASGLY 232 >gi|99034269|ref|ZP_01314324.1| hypothetical protein Wendoof_01000880 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 55 Score = 66.5 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 22/52 (42%) Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 KA I + + G+ + +G T+ VV S ++I+ + + + Sbjct: 2 KATAFGAIISVSSCYYGYHCKEGARGVGVATTSTVVLSSILIILANYMITLI 53 >gi|91788521|ref|YP_549473.1| ABC-type transport system permease [Polaromonas sp. JS666] gi|91697746|gb|ABE44575.1| ABC-type transport system ipermease component [Polaromonas sp. JS666] Length = 267 Score = 66.2 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 80/188 (42%), Gaps = 3/188 (1%) Query: 150 KGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLR 209 + L L R +Y + ++ + V+ + +G +++ ++ + + Sbjct: 47 RESRLVLSRHIYLNTAPILLWFTVLCALVTVVLTRIVVVTALSYGLSQYALQVVIRVLVL 106 Query: 210 EIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPL 269 E+ L A+ +A R AE+ +M+ + ++D +R G D VR + PR+ A + S Sbjct: 107 ELIPLTAALFVALRCTIPDGAELTAMQASGQLDEMRRQGGDPVRREVLPRVVAGMFSGIT 166 Query: 270 LTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV-- 327 L L++ A++ A + ++ + A + F + A ++K F A+ ++ Sbjct: 167 LAALSSVVALVVAYVAVYGFTVSGLAAYTRLFGQVFSPAVTLIFVLKTLFFCLAVALIPM 226 Query: 328 -AMKEGFA 334 + G Sbjct: 227 ASALYGMR 234 >gi|171056704|ref|YP_001789053.1| ABC-type transport system ipermease [Leptothrix cholodnii SP-6] gi|170774149|gb|ACB32288.1| ABC-type transport system ipermease component [Leptothrix cholodnii SP-6] Length = 249 Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 80/212 (37%) Query: 151 GFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLRE 210 + R + + +++ + V+ + +G ++++++ + + E Sbjct: 30 HNRREMARHIALGTGPALLGFTVLTTLISLVVIRIVLVTALSYGLSQYALEMVVRVLVLE 89 Query: 211 IGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLL 270 + L A+ A R AEI +++ + DA GL +R + PR+ A + L+ Sbjct: 90 LIPLAAALFAALRCTIPNAAEIAALRARDGWDAWSPQGLQRLRSEVLPRMAASVFCALLM 149 Query: 271 TILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMK 330 ++ ++ A ++++ + F + + A +K F + ++ + Sbjct: 150 AAVSCVVTLVVAYLLVYGFTSAGFGAYTHTVGRVFSPAVALIFGLKIVFFGLTVALMPIA 209 Query: 331 EGFAVGVHSNSLGKKVTTCVVQSISIVIIIDS 362 +V+ ++++I++ Sbjct: 210 SALDAAPRRLGRASAELQGLVRMFLVILLIEA 241 >gi|89900018|ref|YP_522489.1| ABC-type transport system permease [Rhodoferax ferrireducens T118] gi|89344755|gb|ABD68958.1| ABC-type transport system ipermease component [Rhodoferax ferrireducens T118] Length = 266 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 81/216 (37%), Gaps = 3/216 (1%) Query: 112 YHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVV 171 G+ +++ H LG ++ ++ + + S R +Y +P Sbjct: 12 AAWGRALLRGAASWWQMIH-LGAIVLVLALSPSTYNRINRAITS--RHIYASTWQVLPWF 68 Query: 172 ILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 ++ + V+ + +G +++ ++ + + E+ L A+ +A R+G A Sbjct: 69 TAMAALFSLVLIRIVVVTALNYGLSQYALQMVVRVLVLELIPLSAALFVALRAGMTFNAG 128 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYD 291 + D + L +R + PR+ A S+ L ++ + ++ A ++++ Sbjct: 129 AQTNARPSPFDPSAPLSLTRLRADVVPRVLAGAFSVLTLAMINSVIVLVLAYLIVYGLSP 188 Query: 292 IPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 + L+ +K F + A+ +V Sbjct: 189 WGLPGYTRTVGHVFDLSVTLGFALKTVFFSLAVAVV 224 >gi|108798622|ref|YP_638819.1| hypothetical protein Mmcs_1653 [Mycobacterium sp. MCS] gi|108769041|gb|ABG07763.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length = 116 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 28/93 (30%) Query: 264 IISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 +I + L +A + ++ +Y VF F + +F A Sbjct: 1 MIVVVPLYCVALLMSFFSVRVITTAFYGQGSGVFDHYFDTFLNPQAVFFSFAVTVAAALV 60 Query: 324 IGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISI 356 I ++ G +G+ V S+ Sbjct: 61 IMLIHTYYGLNATGGPAGVGEAVGRATRTSLIA 93 >gi|330875117|gb|EGH09266.1| toluene tolerance proteinTtg2B [Pseudomonas syringae pv. glycinea str. race 4] Length = 113 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 ++ + +LG L+RQ+Y VGV + ++++ Sbjct: 9 RVRLLGRSAIDIVTVLGRSGLFLVNALLGRGGAGSSFQLLVRQLYSVGVMSLVIIVVSGM 68 Query: 177 VTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA 221 G V+A QG L+++G+E ++++ LRE+G ++TA++ A Sbjct: 69 FIGMVLALQGFSILTKYGSEQAVGQMVALTLLRELGPVVTALLFA 113 >gi|4580939|gb|AAD24544.1| YrbE1A [Mycobacterium leprae] Length = 112 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 57/112 (50%) Query: 174 ISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIG 233 +S ++ L+QF A S +I + ++G L T +++AG ++I A++G Sbjct: 1 VSIPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVTQLGPLTTVLVVAGAGSTSICADLG 60 Query: 234 SMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + I EEIDA+ +G+D + L+ PR+ A + LL L ++G + Sbjct: 61 ARTIREEIDAMEVLGIDPIHRLVVPRVLAATLVATLLNGLVITVGLVGGYLF 112 >gi|270156845|ref|ZP_06185502.1| putative ABC transport system permease protein [Legionella longbeachae D-4968] gi|289164714|ref|YP_003454852.1| ABC transporter (permease) [Legionella longbeachae NSW150] gi|269988870|gb|EEZ95124.1| putative ABC transport system permease protein [Legionella longbeachae D-4968] gi|288857887|emb|CBJ11742.1| putative ABC transporter (permease) [Legionella longbeachae NSW150] Length = 252 Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 77/223 (34%), Gaps = 10/223 (4%) Query: 110 LHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP 169 + +G V + +G + + + + LL+++R +YY GV V Sbjct: 3 VLNKLGVYFVGLVYSFILFLRFMGHLYCSLINML--MGRLRLSLLNIVRTIYYAGVKLVI 60 Query: 170 VVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 + IS G + + L+ + + + + ++ + V++ + Sbjct: 61 PFMFISTFLGISMVMKVNSILTPYNLQRDGRLIAQNILTHDLVPFIIGVLLCIQCALNF- 119 Query: 230 AEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKY 289 I E+++ + + ++ I P + + I+ LL A + I + + Sbjct: 120 --INVKVNEEDLNVPQQVVVN----HILPVLIGINIAGGLLYAYAIAAFFISIYVTYQYF 173 Query: 290 YDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGI-VAMKE 331 V R + TL ++ ++K + + + Sbjct: 174 LYTNLYVPMIRILTAITLYDVVYSILKTTLYCTIVSLTIGYYY 216 >gi|329903553|ref|ZP_08273548.1| ABC-type transport system ipermease component [Oxalobacteraceae bacterium IMCC9480] gi|327548291|gb|EGF32984.1| ABC-type transport system ipermease component [Oxalobacteraceae bacterium IMCC9480] Length = 239 Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 1/197 (0%) Query: 131 ILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQL 190 + L + S ++ R +Y +P ++S + VI Sbjct: 1 MFYLGAIALVMALSPSSYYRANRAVTSRYIYTSTWQVLPWFTMLSALVCQVIIHIVVVTA 60 Query: 191 SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLD 250 +G ++++++ + + E+ L A+ +A RSG A A + E D + + + Sbjct: 61 ISYGLSQYALEMVVRVLVLELIPLSAALFVALRSGLAFDASTA-LPSRVEPDNLSRIDIK 119 Query: 251 FVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI 310 +R P++ A ++ L ++++ +I A I ++ + + Sbjct: 120 RLRNEFVPQVIASAFAVISLAMISSVIVLILAYINVYGFLPWGLVDYTRTVGRVFDPIVT 179 Query: 311 FTGLIKAPFMACAIGIV 327 +K ++ ++ Sbjct: 180 IGFALKTLLFGLSVAVI 196 >gi|108798620|ref|YP_638817.1| putative ABC transport system permease protein [Mycobacterium sp. MCS] gi|108769039|gb|ABG07761.1| putative ABC transport system permease protein [Mycobacterium sp. MCS] Length = 161 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 15/143 (10%) Query: 122 INDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSG---------VPVVI 172 D QA G IS+T + + ++RQ+ +G+ V VV Sbjct: 25 WRDLGDQARFYGQSISSTVQAATTYR------AEVLRQIAAIGLGAGSLAVVGGTVAVVA 78 Query: 173 LISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEI 232 ++ T A +A Q Q+SQ G E + + + +R +A A G+ A++ Sbjct: 79 FLNLSTSAALASQAYNQMSQVGVEALAGFTSAYVNVRLATPASSAFAFAATIGAGTTAQL 138 Query: 233 GSMKINEEIDAIRTMGLDFVRIL 255 G+MKINEEIDA+ MG+ + L Sbjct: 139 GAMKINEEIDALAVMGIRPIAYL 161 >gi|41406191|ref|NP_959027.1| hypothetical protein MAP0093 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394539|gb|AAS02410.1| hypothetical protein MAP_0093 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 175 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 9/131 (6%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQM------YYVGVSGVPVVILISFVT 178 + + L L+ + VG V +++ F Sbjct: 28 LGHMLVFFVRAVLAVPTVLRQY---RTEFLRLLSNIAWGNGSIVVGGGTAGVAVVLGFTA 84 Query: 179 GAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKIN 238 GA++A +G L+ G + + S++ RE+ ++ ++ A ++G A++G+M+I Sbjct: 85 GALVAVEGYNFLNLLGLGPATGIISSLVNTRELAPIMASLAFAMQAGCRFTAQLGAMRIA 144 Query: 239 EEIDAIRTMGL 249 EEIDA+ ++ + Sbjct: 145 EEIDALESLAI 155 >gi|304309830|ref|YP_003809428.1| predicted sulfate transporter/antisigma-factor antagonist STAS [gamma proteobacterium HdN1] gi|301795563|emb|CBL43761.1| predicted sulfate transporter/antisigma-factor antagonist STAS [gamma proteobacterium HdN1] Length = 114 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G R G +++ ++ + S +VDLS +TE DT G +L++ Sbjct: 10 DGGCKIRPEGELTIYRVADYKPQLIQVLESHP---SIVVDLSRVTEFDTAGLQLLILLKR 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89 + + + H ++ L Sbjct: 67 EAKARGITSSFTGHSAEVTELFQLFD 92 >gi|302538621|ref|ZP_07290963.1| anti-sigma factor antagonist [Streptomyces sp. C] gi|302447516|gb|EFL19332.1| anti-sigma factor antagonist [Streptomyces sp. C] Length = 132 Score = 56.1 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 32/105 (30%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G +G+ + + V + + + +D +A++ +D+ G ++ + Sbjct: 8 GTGRIELSGDLDHHHAGLLVEAVDRLLAEQPGLRALRLDCAALSAVDSSGLAALLMVRRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + QL L+ T + S + Sbjct: 68 TDTAGAGLHLDGRPVQLNRLLEITGTLHHLTAPRPGARATGSPQR 112 >gi|239981272|ref|ZP_04703796.1| hypothetical protein SalbJ_17681 [Streptomyces albus J1074] gi|291453129|ref|ZP_06592519.1| predicted protein [Streptomyces albus J1074] gi|291356078|gb|EFE82980.1| predicted protein [Streptomyces albus J1074] Length = 127 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 3/100 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R AG + +V + + +D + +T D++G ++ + Sbjct: 28 GTLALRLAGALDHESADALVREVARRLAERPAPRLLRLDCAGLTACDSLGLSALLMIGRR 87 Query: 65 YHG---KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++L H+++L + ++P + Sbjct: 88 TGAAACALRLDRRPPHLDRLLEITGTHGYLVGPGEEPGPA 127 >gi|288941305|ref|YP_003443545.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180] gi|288896677|gb|ADC62513.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180] Length = 108 Score = 53.8 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G+ ++E + + + + + +DLS ITE+D G +L+++ E + Sbjct: 13 LILSGDLTIYTVAETLNRLRPHLGEHPTGE---LDLSGITELDGAGIQLLLWLRETARLR 69 Query: 69 IKLQGVSTH---IEQLFSLISF 87 +S H ++++ L+ Sbjct: 70 GITLRLSAHGSVVDEVLDLLQL 91 >gi|261868150|ref|YP_003256072.1| putative NTP binding protein, contains STAS domain [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413482|gb|ACX82853.1| putative NTP binding protein, contains STAS domain [Aggregatibacter actinomycetemcomitans D11S-1] Length = 111 Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 3/87 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + R G + + + + ++ DLS + ID+ G L+ F+ Sbjct: 15 DDKITLRLKGELSQNTLLPLWQQRASFLLARKTETLDVHWDLSQVNRIDSAGFALLCDFL 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + K LQ + + L L + Sbjct: 75 NE--RKQLLQNPPSQLLTLADLFGLSD 99 >gi|291450033|ref|ZP_06589423.1| predicted protein [Streptomyces albus J1074] gi|291352982|gb|EFE79884.1| predicted protein [Streptomyces albus J1074] Length = 185 Score = 52.7 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE G V + G+ I+ + + A S +VDLS + D+ + + Sbjct: 77 SEGGGIVVQLGGDLDLENITPLGPALSDAAATV--SGPVVVDLSGVGFADSSTVNVFLQA 134 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 +++ +S +E+LF LI Sbjct: 135 YGAIGPRLRFAALSPFVERLFGLIGL 160 >gi|289207567|ref|YP_003459633.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix] gi|288943198|gb|ADC70897.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. K90mix] Length = 108 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G + + + + VDL +T ID+ G L++ + H + Sbjct: 13 LALSGTLTFATVPGLESRIRALLAGLPA--RTRVDLGEVTRIDSAGVALLVTLWRRVHEQ 70 Query: 69 IKLQGVSTHIEQLFSLISF 87 G + + L L+ Sbjct: 71 GGELGFHSIPQGLVPLVEL 89 >gi|255020162|ref|ZP_05292231.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756] gi|254970304|gb|EET27797.1| hypothetical protein ACA_0899 [Acidithiobacillus caldus ATCC 51756] Length = 114 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 5/96 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ +V R +G+W+ + + + +S+ D +D + D+ L++ + Sbjct: 14 EDDQSVLRLSGDWRLDA---LDEALRSEELRSLAVDRVRLD--DVDAADSATLALLLDWQ 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 E+ + + ++ L L+ + + + P Sbjct: 69 ERALQRKRPLVLTGLGPGLRELVHLYGLEALLTEAP 104 >gi|251793146|ref|YP_003007874.1| hypothetical protein NT05HA_1442 [Aggregatibacter aphrophilus NJ8700] gi|247534541|gb|ACS97787.1| conserved hypothetical protein [Aggregatibacter aphrophilus NJ8700] Length = 119 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G + +G + + + + + DL+ IT ID+ G L+ F+ Sbjct: 15 DGKMTLQLSGELSRNTLLPLWQQRASFLLEGQSSGQTILWDLTQITRIDSAGFALLCEFL 74 Query: 63 E 63 + Sbjct: 75 Q 75 >gi|52425764|ref|YP_088901.1| hypothetical protein MS1709 [Mannheimia succiniciproducens MBEL55E] gi|52307816|gb|AAU38316.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 120 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 13/99 (13%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVM-------AINKSIQSDSAIVDLSAITEIDTIGAE 56 + FR G + + ++ + I + DLS ++ ID+ G Sbjct: 15 DDRIAFRLDGELSRDTLLPLWNEFQKREQRSSFLSERQIADKNISWDLSQVSRIDSAGFA 74 Query: 57 LIMYFM------EKYHGKIKLQGVSTHIEQLFSLISFTH 89 L+ + + + L+ V + L L+ Sbjct: 75 LLCDLLHYCQAKKNADKTLLLENVPPQLLTLADLVGLAD 113 >gi|163792925|ref|ZP_02186901.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium BAL199] gi|159181571|gb|EDP66083.1| sulfate transport ATP-binding protein cysA [alpha proteobacterium BAL199] Length = 528 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 116/347 (33%), Gaps = 29/347 (8%) Query: 42 VDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT----HRKKIKNQK 97 +D+SA + A LI + + ++ H L + R+ + Sbjct: 177 LDVSASKRL----AALIKSLSRDVGVPVVI--IAHHYRHLIDVADRVLMLDPRRHALVEL 230 Query: 98 PQRSFFYNSFKNLHYHIGKKIVKFINDSCSQAHILGLVISNTGEFCASS-YKFKGFLLSL 156 P + + + + + + + G AS+ ++ L L Sbjct: 231 PANARRVERELEAIEAVAVPFDEMRAEPLAPEKATATIAVSAGPMRASAAWRLSWTLRFL 290 Query: 157 IRQMYYVG--VSGVPVVILISFVTGAVIA---QQGAFQLSQFGAEIFSIDLMSILQLREI 211 ++ + S + V L S + G V Q I D ++ L E+ Sbjct: 291 AGYLWELCFSPSALLFVGLGSVIVGFVTTWFIFQ-YLPFRDLLMPIIHSDALAGLAFSEL 349 Query: 212 ---GVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLP 268 L T V+IA R+ + I A+IG +++I ++R + + L + A ++ Sbjct: 350 RVLAPLTTGVLIATRNTALIGADIGHKVYSDQIKSMRNLNIPHDVYLTGTVLVASAVASV 409 Query: 269 LLTILANFSAIIGASIVIWKYYDIPFAVFFSR---FHSTATLANIFT---GLI--KAPFM 320 +L I++ A W Y + + R F + G I KA Sbjct: 410 VLVIMSECLTTWVAM-ATWSYIFPDESTYMWRDQYFQRMWPPGELIMDGTGWIAAKAIPS 468 Query: 321 ACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 +A+ G+ + + + ++ +S V+I S + Sbjct: 469 IVGAAGIALYFGYRPKSTVVDINQSIAQALIWGLSFVLIWQSALTLI 515 >gi|152978466|ref|YP_001344095.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z] gi|150840189|gb|ABR74160.1| anti-sigma-factor antagonist [Actinobacillus succinogenes 130Z] Length = 116 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 4/90 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G + + ++ K I + I DLS IT ID+ G L+ + Sbjct: 15 DDRMTLQLIGELSRDTLLPLWRQRFAVLSDKQIAGQNVIFDLSNITRIDSAGFALLCELI 74 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 K + K + QL +L Sbjct: 75 HHVRKVQERDKGLTIEHAPSQLLTLAELFD 104 >gi|171060467|ref|YP_001792816.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] gi|170777912|gb|ACB36051.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] Length = 110 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + R G +E+ ++ + + +DLS +T+IDT G +L+M + Sbjct: 9 DAPRTLRIQGELSIFRATELKQALLA------EPAATEIDLSGVTDIDTAGLQLLMLAKK 62 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89 + + H + L H Sbjct: 63 HARRSGREVRLVGHSPAVIELFELLH 88 >gi|297196319|ref|ZP_06913717.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] gi|197722897|gb|EDY66805.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] Length = 132 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 34/89 (38%), Gaps = 5/89 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60 V +G + + + + + + +VD + + D+ G ++++ Sbjct: 27 RGDTVVLSLSGELDHDTAAPLREAIEEHL--HAGAKRLVVDCAGLDFCDSTGLNVLLHGR 84 Query: 61 -FMEKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ +++L G+ + ++F + Sbjct: 85 LAAQETDARVELAGLRPPVARMFEITGAH 113 >gi|169629235|ref|YP_001702884.1| hypothetical protein MAB_2149 [Mycobacterium abscessus ATCC 19977] gi|169241202|emb|CAM62230.1| Hypothetical protein MAB_2149 [Mycobacterium abscessus] Length = 217 Score = 50.7 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 18/202 (8%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 +S TG ++ + RQ + V + +++ +I + FG Sbjct: 34 FLSMTGGVLVAALTRPPAVREFFRQAGAIARVSVLPMCMVAIPLAVLIVLVLEALV--FG 91 Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 F ++ A + + AE S +I +I A+R+ G+D Sbjct: 92 PTGF--------------PTHAVLVAAAAGATVVFAEADSARIQRDIGAMRSRGIDITHG 137 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGL 314 + PR+ A ++ L +A +A G P ++F + NI + Sbjct: 138 FVVPRVLATAVAAVPLAFIAVAAA--GVYFFSAFGKHTPLSLFIGNLLQLMSPLNILIVV 195 Query: 315 IKAPFMACAIGIVAMKEGFAVG 336 I+A + G++A G Sbjct: 196 IEAASLGLIAGLIACYRGATAT 217 >gi|269126689|ref|YP_003300059.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268311647|gb|ACY98021.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 117 Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 4/81 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G + + V A ++D++A+T +D+ G ++ ++ Sbjct: 19 TVLELTGELDLAGLPALRRRVDEACAA-PGPPRLVIDMAAVTFMDSCGLGGLVRCWKRVG 77 Query: 67 ---GKIKLQGVSTHIEQLFSL 84 G+ L G+ + ++ + Sbjct: 78 ERQGRFILVGLRPQVARVLDI 98 >gi|315633779|ref|ZP_07889069.1| NTP binding protein, contains STAS domain protein [Aggregatibacter segnis ATCC 33393] gi|315477821|gb|EFU68563.1| NTP binding protein, contains STAS domain protein [Aggregatibacter segnis ATCC 33393] Length = 119 Score = 50.7 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 N + +G + + + K+ + DLS +T ID+ G L+ F+ Sbjct: 15 NDRITLQLSGELSRNTLLPLWQQRASFLLGKASAEQNIYWDLSQVTRIDSAGFALLCDFL 74 Query: 63 E 63 + Sbjct: 75 Q 75 >gi|239943303|ref|ZP_04695240.1| putative YrbE family protein [Streptomyces roseosporus NRRL 15998] Length = 73 Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%) Query: 244 IRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS 303 + MG+ ++ L+ PR+ A ++ LL L + +G D + + F + Sbjct: 1 MEVMGVSPIQRLVVPRVLATMLVAVLLNGLISVVGTLGGYFFNVIMQDGTPGAYLASFSA 60 Query: 304 TATLANIFTGLIK 316 A L +++ K Sbjct: 61 LAQLPDLYISEFK 73 >gi|239978136|ref|ZP_04700660.1| putative anti-sigma factor antagonist [Streptomyces albus J1074] Length = 129 Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SE G V + G+ I+ + + A S +VDLS + D+ + + Sbjct: 21 SEGGGIVVQLGGDLDLENITPLGPALSDAAATV--SGPVVVDLSGVGFADSSTVNVFLQA 78 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 +++ +S +E+LF LI Sbjct: 79 YGAIGPRLRFAALSPFVERLFGLIGL 104 >gi|271968052|ref|YP_003342248.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270511227|gb|ACZ89505.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 118 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SEN V R G +++ + + + + + VDLS +T +D+ G ++ Sbjct: 11 SENATLVLRPEGELDVNTAAQLQAWLDDYLARGPRPATL-VDLSGLTFVDSPGLAALLAM 69 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 + G+ + + Q L+ Sbjct: 70 RRRLTGEGRAVAYADPTPQPARLLR 94 >gi|284042296|ref|YP_003392636.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283946517|gb|ADB49261.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 132 Score = 50.0 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 GI+V G E+ + + ++ +D +VDLS +D G + ++ + Sbjct: 25 GISVIAVQGELDLFTAPELRERLREHMDDPEPADDLVVDLSGCAFVDASGCQALLRAARQ 84 Query: 65 Y---HGKIKLQGVSTHIEQLFSLISFTH 89 ++ + + ++F+++ Sbjct: 85 LTAVGRRLAIVNTNPGNTRIFTVMGLDE 112 >gi|332163076|ref|YP_004299653.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604044|emb|CBY25542.1| uncharacterized protein YrbB [Yersinia enterocolitica subsp. palearctica Y11] gi|325667306|gb|ADZ43950.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 113 Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 8/100 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + + +D +D+S + +D+ G L+++F E K Sbjct: 13 TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104 + + GVS + L L + ++ P + Sbjct: 68 QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIP 107 >gi|269124391|ref|YP_003297761.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268309349|gb|ACY95723.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 110 Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 5/100 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ V G + + I ++D +VDLS + D+ G +++ Sbjct: 9 SQGDYAVVTATGELDLYTAPRLQTALASLIRD--RADRVVVDLSGVEFCDSTGVNVLLAA 66 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 M++ G ++L G+ + ++ + I P Sbjct: 67 MKRLQEQGGTLELAGLRPPVRRILQVTGLDSVFTIAEAVP 106 >gi|223041899|ref|ZP_03612085.1| hypothetical protein AM202_0495 [Actinobacillus minor 202] gi|223017315|gb|EEF15740.1| hypothetical protein AM202_0495 [Actinobacillus minor 202] Length = 109 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + N V +G + + + + ++ DL AI+ ID+ G L+ Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQ-RASFLSTRKNQHIYWDLKAISRIDSAGFVLLTE 70 Query: 61 FME 63 + Sbjct: 71 LLH 73 >gi|220933921|ref|YP_002512820.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7] gi|219995231|gb|ACL71833.1| anti-sigma-factor antagonist [Thioalkalivibrio sp. HL-EbGR7] Length = 111 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 2/91 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ R G ++ + A VD+SA+ +D+ G L++ ++ Sbjct: 8 ESEGDTLRLHGGLDLATVAGLWSSSQRLFES--TQPPARVDVSAVDRVDSAGVALLVQWV 65 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + V + LI+ + + Sbjct: 66 GMARARGVALRVEGMSPAMGDLIALADLEPL 96 >gi|332111478|gb|EGJ11461.1| hypothetical protein RBXJA2T_14076 [Rubrivivax benzoatilyticus JA2] Length = 100 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 1/97 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G +E+ + ++ A+ + D +DLSA+TE D+ G +L+M + Sbjct: 5 TLAIEGELTIYRAAELRETLLAALAAAPDGD-LTLDLSAVTEFDSAGVQLLMAAKKSAEA 63 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104 + + + H + + Sbjct: 64 RSRALRLVRHSPSVLDGFQVLDLAGHFGDPLTPPPSH 100 >gi|315125514|ref|YP_004067517.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913] gi|315014027|gb|ADT67365.1| anti-sigma B factor antagonist [Pseudoalteromonas sp. SM9913] Length = 97 Score = 49.6 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59 +S+ R +G I + ++ + + + DLS +T +DT G A LI Sbjct: 6 ISQVDEQHLRVSGELTHNSIGN---ERLLNTKRQTEHKTLYFDLSEVTRVDTAGLAWLIH 62 Query: 60 YF--MEKYHGKIKLQGVSTHIEQLFSL 84 F ++ +++LQ ++ L L Sbjct: 63 SFTEFKQQGIRLELQNPPEQLQNLMQL 89 >gi|123443931|ref|YP_001007902.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090892|emb|CAL13774.1| putative anti-sigma B factor antagonist [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 107 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + + +D +D+S + +D+ G L+++F E K Sbjct: 13 TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 G + + GVS + L L + ++ P Sbjct: 68 QGGSLVIIGVSDRLSTLIELYNLRDVIPVETVIP 101 >gi|307129074|ref|YP_003881090.1| hypothetical protein Dda3937_00693 [Dickeya dadantii 3937] gi|306526603|gb|ADM96533.1| predicted protein [Dickeya dadantii 3937] Length = 100 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 7/97 (7%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G R G+ + + +N DS+++D+ + +D+ G L+++F Sbjct: 10 DDGA--LRLEGDLDRNTLLPLWQQREALLN-----DSSVLDVGQVARVDSSGLALLVHFY 62 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + K + ++L +LI + +I +P Sbjct: 63 HQQEQRGKPLAIIGASDRLRTLIQLYNLSEIIPVRPA 99 >gi|330862749|emb|CBX72891.1| uncharacterized protein yrbB [Yersinia enterocolitica W22703] Length = 115 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 8/100 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + + +D +D+S + +D+ G L+++F E K Sbjct: 15 TLVLQGELDRETLLPLWQQREALL-----ADKTRIDVSQLRRVDSSGLALLVHFRELRNK 69 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104 + + GVS + L L + ++ P + Sbjct: 70 QGRSLAIIGVSDRLSTLIELYNLRDVIPVETIIPVEAVIP 109 >gi|240948312|ref|ZP_04752698.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305] gi|240297351|gb|EER47892.1| hypothetical protein AM305_05649 [Actinobacillus minor NM305] Length = 109 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + N V +G + + + + ++ DL AI+ ID+ G L+ Sbjct: 12 LHNNESLVVELSGELTRDTLLPLWKQ-RASFLSTRKNQHIYWDLKAISRIDSAGFVLLTE 70 Query: 61 FME 63 + Sbjct: 71 LLH 73 >gi|254362422|ref|ZP_04978531.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213] gi|261494091|ref|ZP_05990594.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496068|ref|ZP_05992478.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. OVINE] gi|153094011|gb|EDN74927.1| hypothetical protein MHA_2029 [Mannheimia haemolytica PHL213] gi|261308318|gb|EEY09611.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310257|gb|EEY11457.1| putative anti-sigma factor B antagonist [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 107 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 3/81 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG- 67 + +G + + ++ + + S DL IT ID+ G L+ + YH Sbjct: 19 VKLSGELTRNTLLPLWKQRASFLSPTGK-QSLYWDLKEITRIDSAGFTLLAELLNHYHKI 77 Query: 68 -KIKLQGVSTHIEQLFSLISF 87 L + L +L Sbjct: 78 IPNSLINTPDSVRTLAALYDL 98 >gi|270263236|ref|ZP_06191506.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13] gi|270042924|gb|EFA16018.1| anti-sigma-factor antagonist [Serratia odorifera 4Rx13] Length = 100 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + + + +D +D+S + +D+ G L+++ E+ Sbjct: 13 TLILRGELDRETLLPLWEQRETLL-----ADKTALDVSQLQRVDSSGLALLVHLREQQRQ 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + +S ++L +LI+ Sbjct: 68 RGVELKISGATDRLKTLIAL 87 >gi|261364832|ref|ZP_05977715.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] gi|288566870|gb|EFC88430.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] Length = 92 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ AD + D+ VDLS + D+ L++ + + G Sbjct: 9 TLHISGDITVKTLT--ADAFTRFRQQCRLKDTHAVDLSGVGRADSACVSLLLDALRRPDG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 KI LQG+ + L L Sbjct: 67 KITLQGIPESVRTLSELYE 85 >gi|165976708|ref|YP_001652301.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307246206|ref|ZP_07528287.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250540|ref|ZP_07532484.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255186|ref|ZP_07537004.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259624|ref|ZP_07541348.1| hypothetical protein appser11_14220 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|165876809|gb|ABY69857.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306852815|gb|EFM85039.1| hypothetical protein appser1_14100 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306857433|gb|EFM89545.1| hypothetical protein appser4_13200 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306862059|gb|EFM94035.1| hypothetical protein appser9_14220 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866269|gb|EFM98133.1| hypothetical protein appser11_14220 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 117 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 3/83 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66 + +G + + ++ + DL + +D+ G L+ + + Sbjct: 20 VKLSGELTRDTLLPLWRQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNYYQKQ 78 Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89 L V ++ L L T Sbjct: 79 TPNCLIHVPEVVKTLADLFDLTD 101 >gi|296268033|ref|YP_003650665.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] gi|296090820|gb|ADG86772.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] Length = 116 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G + +G ++ + I+ S Q ++D+S + D+ G +++ Sbjct: 9 SSGGTAIVAVSGEIDLYTAPQLQAEFARLISTSPQ--RVVIDMSEVEFCDSTGVNVLLSA 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 +++ + V+ + ++ Sbjct: 67 LKRLRERGGDLEVAAPRSAVRKILQ 91 >gi|271964584|ref|YP_003338780.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270507759|gb|ACZ86037.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 126 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 1/106 (0%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G+++ AG + + A S IVD+ ++ D++G ++ + Sbjct: 18 RDGVSIIHVAGELDLATAPTLRRHLRAATLPS-APPVLIVDVREVSFCDSVGLSELVLAL 76 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 + + +S L + T + Sbjct: 77 HRSQTGGQRPMLSGQHRSLERPLYRTGLHNAFERHASCDAALRQVG 122 >gi|303250630|ref|ZP_07336827.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252923|ref|ZP_07534811.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650618|gb|EFL80777.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859561|gb|EFM91586.1| hypothetical protein appser6_14340 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 117 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 3/83 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66 + +G + + ++ + DL + +D+ G L++ + + Sbjct: 20 VKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLVELLNYYQKQ 78 Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89 L V ++ L L T Sbjct: 79 TPNCLIHVPEVVKTLADLFDLTD 101 >gi|261378132|ref|ZP_05982705.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685] gi|269145592|gb|EEZ72010.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685] Length = 92 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 R +G+ ++ + + + VD S + D+ L++ + + Sbjct: 9 TLRVSGDITVKTLTG--EAFERFQQQCRLNGIVAVDFSGVNRADSACVSLLLEILRRRKD 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 IKL G+ + L L Sbjct: 67 SIKLTGIPESVRALSELYE 85 >gi|15602043|ref|NP_245115.1| hypothetical protein PM0178 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720398|gb|AAK02262.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 125 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 4/88 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAI-NKSIQSDSAIVDLSAITEIDTIGAELI---M 59 N R AG + + + + Q + DL+ + +D+ G L+ + Sbjct: 15 NDKITLRLAGELSRDTLLPLWSQRASFLPEEKSQVQTLYWDLTDVARVDSAGFALLCDFI 74 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISF 87 +K + + QL +L Sbjct: 75 RHCQKVMKQETSIILHNAPRQLLTLADL 102 >gi|268612024|ref|ZP_06145751.1| anti-sigma-factor antagonist domain-containing protein [Ruminococcus flavefaciens FD-1] Length = 101 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +ENG +V +G +++ + I S + ++DL IT +D+ G LIM Sbjct: 7 NENGTSVAYISGEIDHHNAADLRSQLDRYIISS-RPSQLVIDLEGITFMDSSGIGLIMGR 65 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84 M+ G++ + +I ++ L Sbjct: 66 SKLMKTCGGRLSVHSPQPYIRRVLKL 91 >gi|269126279|ref|YP_003299649.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268311237|gb|ACY97611.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 126 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 5/108 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + +G G + A++++ VDL +T D G +++ Sbjct: 21 VGADGRVTIAIRGEMDLASAGSLYRRARAALSEA--DGDVRVDLGGVTFCDAQGLSVLVR 78 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 ++ G++ L+ V ++ +L + R + P Sbjct: 79 IANDAQRQGGRVLLERVPPNVARLLRITGLDRRFPMSAGAPSIPEPLG 126 >gi|258654237|ref|YP_003203393.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233] gi|258557462|gb|ACV80404.1| anti-sigma-factor antagonist [Nakamurella multipartita DSM 44233] Length = 136 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 38/107 (35%), Gaps = 4/107 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMA-INKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 T+ R G + E +A ++ +DLS ++ +D G E+++ Sbjct: 30 GAGTLVRIVGRLDAREAPRVARELAAVNRLPRRGPPRLTLDLSGVSYLDDTGLEVLLQLQ 89 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ G+++LQ + + +L ++ + Sbjct: 90 DRLAAQGGELELQSPTAAVVRLLHEAHLHGAAGLRAPARELRPPTGP 136 >gi|88811863|ref|ZP_01127116.1| STAS domain protein [Nitrococcus mobilis Nb-231] gi|88790747|gb|EAR21861.1| STAS domain protein [Nitrococcus mobilis Nb-231] Length = 119 Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 3/87 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + G + ++ ++ Q VDL+ + +D+ G L++ + Sbjct: 8 SRDEEGRLALLGELTFETVPGLSKELDSMFK---QGPRLCVDLAGLERVDSAGLALLIEW 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 +QL +L + Sbjct: 65 ARLTRTSGHALEFINTPQQLLTLARLS 91 >gi|32035040|ref|ZP_00135106.1| COG3113: Predicted NTP binding protein (contains STAS domain) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208754|ref|YP_001053979.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae L20] gi|190150608|ref|YP_001969133.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252082|ref|ZP_07338251.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248313|ref|ZP_07530338.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307257354|ref|ZP_07539124.1| hypothetical protein appser10_13520 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307263953|ref|ZP_07545556.1| hypothetical protein appser13_13610 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097546|gb|ABN74374.1| hypothetical protein APL_1288 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189915739|gb|ACE61991.1| hypothetical protein APP7_1339 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649064|gb|EFL79251.1| putative anti-sigma factor B antagonist [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855183|gb|EFM87361.1| hypothetical protein appser2_12910 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864204|gb|EFM96117.1| hypothetical protein appser10_13520 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306870715|gb|EFN02456.1| hypothetical protein appser13_13610 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 117 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 3/83 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66 + +G + + ++ + DL + +D+ G L+ + + Sbjct: 20 VKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNYYQKQ 78 Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89 L V ++ L L T Sbjct: 79 TPNCLIHVPEVVKTLADLFDLTD 101 >gi|301155767|emb|CBW15235.1| predicted protein [Haemophilus parainfluenzae T3T1] Length = 111 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62 N + +G + + +++ + S I DL+ I ID+ G L+ F+ Sbjct: 12 NDKIALQLSGELSRNTLLPLWQQRASFLSEKQNNQSLIEFDLTEINRIDSAGFALLCDFL 71 Query: 63 EKYHG----KIKLQGVSTHIEQLFSLISFTH 89 K++L + L L++ +H Sbjct: 72 HDCEQLPNKKVRLINPPEQLLTLADLVNLSH 102 >gi|255067846|ref|ZP_05319701.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] gi|255047937|gb|EET43401.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] Length = 92 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + + +G Sbjct: 9 TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLDALRRPNG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 KI LQG+ + L L Sbjct: 67 KISLQGIPESVRTLSELYE 85 >gi|119855026|ref|YP_935631.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Mycobacterium sp. KMS] gi|119697744|gb|ABL94816.1| ABC-type transport system involved in resistance to organic solvents permease component-like protein [Mycobacterium sp. KMS] Length = 206 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 39/92 (42%) Query: 129 AHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAF 188 I+G + + T + + K + Q ++V + + +S + + Sbjct: 25 LSIIGGLYAMTLDMFVAMVKPPFQWREFLLQTWFVARVSMVPALTLSIPLVVLTSFTFNT 84 Query: 189 QLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 L++FGA FS ++ + +IG +T +++ Sbjct: 85 LLAEFGAADFSGTGAALGAVNQIGPFVTVLVV 116 >gi|219870958|ref|YP_002475333.1| putative anti-sigma factor B antagonist [Haemophilus parasuis SH0165] gi|219691162|gb|ACL32385.1| putative anti-sigma factor B antagonist [Haemophilus parasuis SH0165] Length = 112 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 3/88 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 N + + +G + + ++ S DL +T ID+ G L+ + Sbjct: 15 NESLMVQLSGELTRDTLLPLWKQRASFLSPK-SSQHIYWDLKGLTSIDSSGFTLLAELLH 73 Query: 64 --KYHGKIKLQGVSTHIEQLFSLISFTH 89 + K L V + L L Sbjct: 74 LYQQKNKNCLFNVPQAVHSLAELFDLAD 101 >gi|148823177|ref|YP_001287931.1| integral membrane protein YrbE3a [Mycobacterium tuberculosis F11] gi|148721704|gb|ABR06329.1| hypothetical integral membrane protein yrbE3A [Mycobacterium tuberculosis F11] Length = 132 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 46/119 (38%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILIS 175 K + + LG + T + +K + Q ++V +L++ Sbjct: 11 KAAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLLQCWFVARVSTLPGVLMT 70 Query: 176 FVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGS 234 + L+ GA FS +I + + ++T +++AG +A+ A++G+ Sbjct: 71 IPWAVISGFLFNVLLTDIGAADFSGTGCAIFTVNQSAPIVTVLVVAGAGATAMCADLGA 129 >gi|311742619|ref|ZP_07716428.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311314247|gb|EFQ84155.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length = 116 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 G + +G + + + Q +++ +L++ VI Sbjct: 6 FVRTLSTFGDFYTFSGNVFRQMFTRRFQFREFVSQAWFITTVSFGPALLVAIPFCVVIIF 65 Query: 185 QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIV 229 Q L Q GA + ++ +REIG +++ +++AG + Sbjct: 66 QVNQLLIQIGAVDLAGAGAAVAVVREIGPIVSVLVVAGAGPGTVT 110 >gi|285017152|ref|YP_003374863.1| anti-sigma factor antagonist transcription regulator protein [Xanthomonas albilineans GPE PC73] gi|283472370|emb|CBA14875.1| hypothetical anti-sigma factor antagonist transcription regulator protein [Xanthomonas albilineans] Length = 127 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 41/119 (34%), Gaps = 5/119 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 +++ +G + + + + + I + ++DLS + I + G I Sbjct: 11 AQDKRQRITLSGRLDTHTYQTLDEALAPLLATPIT--TLVLDLSQLDYISSAGIRSIFKA 68 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + G++ + + I ++F L+ +I + + + + G Sbjct: 69 RKLLAARDGQVLVVNPAPQIRKVFDLVKAVPLNEIFTSIQELDDYLDEMQRRVVEQGDS 127 >gi|291439807|ref|ZP_06579197.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291342702|gb|EFE69658.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 295 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G +A+ + + + D +D+S + +DT G E + Sbjct: 93 EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 149 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113 + + + ++ L ++ P+ + + Sbjct: 150 DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 203 >gi|302867297|ref|YP_003835934.1| sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|302570156|gb|ADL46358.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] Length = 123 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 2/95 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G R AG E+ D V + +D + + D+ G ++ Sbjct: 22 DAGSARVRLAGELDFDTAPELVDAVADL--RRDGHQELELDFAGVDLCDSSGLSALVVIH 79 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 G I+L ++ I L Q+ Sbjct: 80 RAGTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114 >gi|311277836|ref|YP_003940067.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1] gi|308747031|gb|ADO46783.1| hypothetical protein Entcl_0505 [Enterobacter cloacae SCF1] Length = 96 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65 R G I + D +I+DLS +T +DT G L+++ + Sbjct: 14 LRLQGELDQDVIPPLWDA-----RAEATVGVSILDLSDVTRVDTAGVALLVHFVALIRAQ 68 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHR 90 ++ G S ++ L L + + Sbjct: 69 GKTPEIVGKSEKMQTLVQLYNLSDD 93 >gi|157373329|ref|YP_001471929.1| hypothetical protein Ssed_0188 [Shewanella sediminis HAW-EB3] gi|157315703|gb|ABV34801.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 98 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 3/81 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + I I + + +D+S ++ +DT GA+L+ F + + Sbjct: 5 TIKLDSELTIRNIQPIFARLSELL---THDKLLHIDVSQLSRVDTAGAQLLYLFSQTCNA 61 Query: 68 KIKLQGVSTHIEQLFSLISFT 88 + +L S + Sbjct: 62 RSLKVEWQGGQPELRSNLKSL 82 >gi|254672984|emb|CBA07467.1| conserved hypothetical protein [Neisseria meningitidis alpha275] Length = 100 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 17 TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 75 SVRLTGIPESVRALSELYE 93 >gi|225873833|ref|YP_002755292.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196] gi|225791854|gb|ACO31944.1| anti-anti-sigma factor [Acidobacterium capsulatum ATCC 51196] Length = 117 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Query: 2 SENGITVFRFAGNWK-SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + V G+ SP + ++ + + ++ + + D++ + +D+ G ++ Sbjct: 10 ASDELLVITLTGSMTMSPALDQLMEQLYAQLDTNPP-RHIVFDMAGVDYLDSTGLGFLVR 68 Query: 61 F---MEKYHGKIKLQGVSTHIEQLFSLISF 87 +EK G I+L G S ++ L ++ Sbjct: 69 INRDLEKRDGFIRLCGTSERVQALMAMTRT 98 >gi|117164995|emb|CAJ88547.1| putative anti sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 128 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 2/114 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G TV G +EIA + + ++DLS + D G L+ Sbjct: 17 EHGHTVLELRGEIDIASAAEIAPRLEREAGR--PGARVVLDLSGVEFFDCSGLRLLYRAR 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 + + ++ T ++ + + G Sbjct: 75 RQVLDHGGQVHLVCTHPLTLRMLRITGLARLLPPRATLDEVLGLTRPAGRRTGH 128 >gi|296166009|ref|ZP_06848461.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898630|gb|EFG78184.1| anti-sigma factor antagonist [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 126 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 27/86 (31%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ + G+ + + D + + +DL+A+ D+ G ++ Sbjct: 8 VTTGRTARLQVRGDLVYETVDAMVDAADRLLGQQPTPADLHLDLAALEFCDSAGLSGLLL 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 + H + L ++ Sbjct: 68 VHRRSHQAGARLHLDNRPRFLDRILD 93 >gi|330468644|ref|YP_004406387.1| sulfate transporter/antisigma-factor antagonist stas [Verrucosispora maris AB-18-032] gi|328811615|gb|AEB45787.1| sulfate transporter/antisigma-factor antagonist stas [Verrucosispora maris AB-18-032] Length = 114 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 2/85 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R G+ E+ V + ++DL+ + D+ G ++ Sbjct: 16 GRAELRLTGDLDFDSAPELISAVEKL--RRDGYRHLLIDLAGVAICDSSGLSALVVAHRG 73 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 I+L G++ ++ QL Sbjct: 74 SPVPIRLVGINPNLRQLLDRTGLAE 98 >gi|261393290|emb|CAX50918.1| conserved hypothetical protein [Neisseria meningitidis 8013] Length = 92 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 TLHISGDITVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|303249034|ref|ZP_07335278.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] gi|302489557|gb|EFL49498.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] Length = 259 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E+G V AG+ + + + + ++DL+ + ID++G L++ Sbjct: 164 EDGTAVVSPAGDIVASVADALRARFKELLQEHPGG--LVIDLARVELIDSVGIGLLIAVH 221 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISF 87 + K G++ L+ V+ + L + Sbjct: 222 NTLGKKGGRLVLRNVNPDLAALLRTMRL 249 >gi|148976137|ref|ZP_01812880.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3] gi|145964532|gb|EDK29786.1| anti-anti-sigma regulatory factor [Vibrionales bacterium SWAT-3] Length = 109 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 G+ + + D+ I+ VD S + +D+ G I+Y ++ Sbjct: 12 TLTLSIFGDLDAAGSRDAQTDIDDVISND-GHQEIEVDFSQVEFLDSSGVGAIVYMFKRL 70 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++L+ VS ++ +L+ H + ++ P S Sbjct: 71 TERERDMRLENVSGQPLEIMNLLRIGHAIPVNSKNPTNS 109 >gi|170728554|ref|YP_001762580.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908] gi|169813901|gb|ACA88485.1| anti-sigma-factor antagonist [Shewanella woodyi ATCC 51908] Length = 100 Score = 46.9 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 ++ +G EI + +N+ ++ ++DLS ++ D+ G I+ M Sbjct: 8 GSICHISGRLSQEEIPALWLRRKSLLNREVE----VIDLSELSYSDSAGIAFILELMSVA 63 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + + ++ EQL LI + N++ ++ Sbjct: 64 RAEKRSLSFTSASEQLSKLIDLYDLELFFNEEAKQG 99 >gi|325129423|gb|EGC52254.1| hypothetical protein NMBOX9930304_1776 [Neisseria meningitidis OX99.30304] gi|325135553|gb|EGC58171.1| hypothetical protein NMBM0579_1853 [Neisseria meningitidis M0579] gi|325201401|gb|ADY96855.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] gi|325207382|gb|ADZ02834.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 92 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|161869248|ref|YP_001598415.1| hypothetical protein NMCC_0253 [Neisseria meningitidis 053442] gi|218767467|ref|YP_002341979.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491] gi|254804225|ref|YP_003082446.1| NTP binding protein [Neisseria meningitidis alpha14] gi|304388518|ref|ZP_07370621.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|121051475|emb|CAM07768.1| hypothetical protein NMA0489 [Neisseria meningitidis Z2491] gi|161594801|gb|ABX72461.1| conserved hypothetical protein [Neisseria meningitidis 053442] gi|254667767|emb|CBA03701.1| NTP binding protein [Neisseria meningitidis alpha14] gi|304337515|gb|EFM03681.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] Length = 100 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 17 TLHISGDVTVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 74 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 75 SVRLTGIPESVRALSELYE 93 >gi|322515304|ref|ZP_08068301.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae ATCC 25976] gi|322118680|gb|EFX90892.1| NTP binding protein (contains STAS domain) [Actinobacillus ureae ATCC 25976] Length = 119 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 3/83 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66 + +G + + ++ + DL + +D+ G L+ + + Sbjct: 20 VKLSGELTRDTLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNHYQKQ 78 Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89 L ++ L L + Sbjct: 79 TPNWLINSPETVKTLAELFDLSE 101 >gi|148657866|ref|YP_001278071.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1] gi|148569976|gb|ABQ92121.1| anti-sigma-factor antagonist [Roseiflexus sp. RS-1] Length = 117 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 39/110 (35%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 ++G+T+ R G +++ D+ + I DL ++ +D+ G ++ Sbjct: 9 DDGVTIVRMEGRLDLLTAADVKRDLADLVAD--GRRRLIFDLERVSFVDSSGLGALISGL 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + G +++ + I L L + + + Y S Sbjct: 67 KAARQVGGDLRIARANEQIRTLLKLTTLERVLRPYETIEEARAGYTSIAA 116 >gi|84385523|ref|ZP_00988554.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01] gi|86146028|ref|ZP_01064355.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222] gi|218709510|ref|YP_002417131.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32] gi|84379503|gb|EAP96355.1| Anti-anti-sigma regulatory factor [Vibrio splendidus 12B01] gi|85836233|gb|EAQ54364.1| Anti-anti-sigma regulatory factor [Vibrio sp. MED222] gi|218322529|emb|CAV18688.1| putative anti-sigma regulatory factor [Vibrio splendidus LGP32] Length = 109 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 G+ + + D+ I+ VD S + +D+ G I+Y ++ Sbjct: 12 TLTLSIFGDLDAAGSRDAQTDIDDVISND-GHPEIEVDFSQVEFLDSSGVGAIVYMFKRL 70 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++L+ V+ ++ +L+ H + ++ P S Sbjct: 71 TERERNMRLENVTGQPLEIMNLLRIGHAIPVNSKNPTNS 109 >gi|15644192|ref|NP_229241.1| anti-sigma factor antagonist, putative [Thermotoga maritima MSB8] gi|170289123|ref|YP_001739361.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2] gi|281412788|ref|YP_003346867.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10] gi|7227948|sp|Q9X1F5|Y1442_THEMA RecName: Full=Putative anti-sigma factor antagonist TM_1442 gi|55670421|pdb|1VC1|A Chain A, Crystal Structure Of The Tm1442 Protein From Thermotoga Maritima, A Homolog Of The Bacillus Subtilis General Stress Response Anti-Anti-Sigma Factor Rsbv gi|55670422|pdb|1VC1|B Chain B, Crystal Structure Of The Tm1442 Protein From Thermotoga Maritima, A Homolog Of The Bacillus Subtilis General Stress Response Anti-Anti-Sigma Factor Rsbv gi|58176711|pdb|1SBO|A Chain A, Solution Structure Of Putative Anti Sigma Factor Antagonist From Thermotoga Maritima (Tm1442) gi|4982007|gb|AAD36511.1|AE001796_3 anti-sigma factor antagonist, putative [Thermotoga maritima MSB8] gi|170176626|gb|ACB09678.1| anti-sigma-factor antagonist [Thermotoga sp. RQ2] gi|281373891|gb|ADA67453.1| anti-sigma-factor antagonist [Thermotoga naphthophila RKU-10] Length = 110 Score = 46.5 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ + R G+ + SE+ + + I+ + + ++DLS+++ +D+ G ++ + Sbjct: 11 QDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDSAGLGTLVVIL 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + K +S+ E + ++ TH Sbjct: 70 KDAKINGKEFILSSLKESISRILKLTH 96 >gi|326775062|ref|ZP_08234327.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1] gi|326655395|gb|EGE40241.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1] Length = 120 Score = 46.5 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G V +G+ ++ + D+ +A S +VDLS + D+ +++ Sbjct: 18 ERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQGN 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 G+++L S +++L +I + Sbjct: 76 TALGGRLRLAAPSPFMQRLIGMIGLDSALPV 106 >gi|255604967|ref|XP_002538316.1| conserved hypothetical protein [Ricinus communis] gi|223512772|gb|EEF24067.1| conserved hypothetical protein [Ricinus communis] Length = 187 Score = 46.5 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 S+ G +E+ ++ A+ D+ +DLS +TE D G +L++ Sbjct: 91 SQGAAACLAVEGEMTIYRAAELHPVLLDAVR---THDAPALDLSDVTEFDCAGMQLLLVA 147 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++ L+G S + F+++ T + Sbjct: 148 RREAQRLGKQLVLRGASPAVRDAFAMLGMTDDGEP 182 >gi|296104904|ref|YP_003615050.1| STAS domain-containing protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059363|gb|ADF64101.1| STAS domain-containing protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 97 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 8/90 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 + +G ++ + D ++DLS +T +DT G L+ + + +K Sbjct: 13 TLKLSGELDQDLLNPLWDK-----RHDAMQGVTLIDLSGVTRVDTAGVALLAHLIAVGKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 + L G S ++ L L + Sbjct: 68 QGATVTLHGASDNVVTLAQLYNLPQDVLPH 97 >gi|54307968|ref|YP_128988.1| hypothetical protein PBPRA0773 [Photobacterium profundum SS9] gi|46912394|emb|CAG19186.1| Hypothetical protein PBPRA0773 [Photobacterium profundum SS9] Length = 103 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 39/85 (45%), Gaps = 6/85 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 G ++E+ ++ ++ ++ S + DL+ ++E+DT G +L+ ++ Sbjct: 16 LSLTGEMSIYSVTELKPRLLAYLH---ENQSVLFDLTEVSEMDTAGIQLLWLCHQEAAKV 72 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHR 90 + + G+S+ + +L+ + Sbjct: 73 GKALAISGISSAALEAITLLRLERQ 97 >gi|182434535|ref|YP_001822254.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463051|dbj|BAG17571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] Length = 123 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 2/91 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G V +G+ ++ + D+ +A S +VDLS + D+ +++ Sbjct: 21 ERGALVLTVSGDLDIDSVAPL--DLALASAADDGSGPVVVDLSGVGFADSTTVNVLLQGN 78 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 G+++L S + +L +I + Sbjct: 79 TALGGRLRLAAPSPFMRRLIGMIGLDSALPV 109 >gi|160933633|ref|ZP_02081021.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753] gi|156867510|gb|EDO60882.1| hypothetical protein CLOLEP_02487 [Clostridium leptum DSM 753] Length = 130 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +++G+ G+ E+ + I + + ++D + +D+ G L+M Sbjct: 17 NQDGVLTAALTGDIDHHTARELRLAIDEVIERD-KPGLLLLDFQGVDFMDSSGIGLVMGR 75 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 M++ G++++ V +I ++F L ++ + + Sbjct: 76 YKVMQQNGGEVEVTHVPKYISRVFKLSGLEQLGVMEKKARPQKR 119 >gi|307261765|ref|ZP_07543431.1| hypothetical protein appser12_13240 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868583|gb|EFN00394.1| hypothetical protein appser12_13240 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 117 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 3/83 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--KYH 66 + +G + + ++ + DL + +D+ G L+ + + Sbjct: 20 VKLSGELTRDMLLPLWKQRASFLSPK-GNQHIYWDLKDLERVDSAGFTLLAELLNYYQKQ 78 Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89 L V ++ L L T Sbjct: 79 TPNCLIHVPEVVKTLADLFDLTD 101 >gi|148270482|ref|YP_001244942.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1] gi|147736026|gb|ABQ47366.1| anti-sigma-factor antagonist [Thermotoga petrophila RKU-1] Length = 110 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ + R G + SE+ + + I+ + + ++DLS+++ +D+ G ++ + Sbjct: 11 QDDKAIVRVQGEIDAYNSSELKEQLRSFISTTSK-KKIVLDLSSVSYMDSAGLGTLVVIL 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + K +S+ E + + TH Sbjct: 70 KDAKINGKEFILSSLKESILRIFKLTH 96 >gi|154499844|ref|ZP_02037882.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC 29799] gi|150271442|gb|EDM98699.1| hypothetical protein BACCAP_03501 [Bacteroides capillosus ATCC 29799] Length = 135 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 30/90 (33%), Gaps = 4/90 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ +G + ++ ++ + +DLS +T +D+ G +++ Sbjct: 42 EDRNLRLTVSGEVDHHGARAVMQELDRQVDAGLP-KRLTLDLSGVTFMDSSGIAVLLRAY 100 Query: 63 EK---YHGKIKLQGVSTHIEQLFSLISFTH 89 + G + + V ++ Sbjct: 101 RRMAELGGALTVANVPPQALKVLRAAGLER 130 >gi|254381137|ref|ZP_04996502.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1] gi|194340047|gb|EDX21013.1| hypothetical protein SSAG_00804 [Streptomyces sp. Mg1] Length = 109 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 3/90 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ G T G + ++ + +DL+ +T ID+ G +++ Sbjct: 12 SQPGHTTITLTGELDLDTNPLVTQATD---PIALARHTLTLDLTGVTFIDSTGLTMLLRL 68 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91 ++ + + + +Q +L T Sbjct: 69 RQRVNTEAGHLELHGARDQALNLFELTGTH 98 >gi|167854681|ref|ZP_02477461.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755] gi|167854218|gb|EDS25452.1| hypothetical protein HPS_01277 [Haemophilus parasuis 29755] Length = 112 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 3/87 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 N + + +G + + ++ DL +T ID+ G L+ + Sbjct: 15 NESLMVQLSGELTRDTLLPLWKQRASFLSPK-SLQHIYWDLKGLTSIDSSGFTLLAELLH 73 Query: 64 --KYHGKIKLQGVSTHIEQLFSLISFT 88 + K L V + L L Sbjct: 74 LYQQKNKNCLFNVPQAVHSLAELFDLA 100 >gi|163749279|ref|ZP_02156528.1| SpoIIAA family protein [Shewanella benthica KT99] gi|161330998|gb|EDQ01924.1| SpoIIAA family protein [Shewanella benthica KT99] Length = 100 Score = 46.1 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +V +G ++ ++ ++ I+ ++DLSA++ D+ G I+ + Sbjct: 8 GSVCCISGRLSQGDVVKLWGKRKRLLSAKIK----VIDLSALSYSDSAGIAFILELIALA 63 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 + ++ +S QL LI+ Sbjct: 64 KREGRVVTLSAASSQLAKLIAL 85 >gi|325579006|ref|ZP_08148962.1| NTP binding protein, contains STAS domain protein [Haemophilus parainfluenzae ATCC 33392] gi|325159241|gb|EGC71375.1| NTP binding protein, contains STAS domain protein [Haemophilus parainfluenzae ATCC 33392] Length = 111 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFM 62 N + +G + + +++ + + S DL+ I ID+ G L+ F+ Sbjct: 12 NDKIALQLSGELSRNTLLPLWQQRASFLSEKLANQSTIEFDLTNIKRIDSAGFALLCDFL 71 Query: 63 EKYHG----KIKLQGVSTHIEQLFSLISFTH 89 K++L + L L++ +H Sbjct: 72 HDSEQLPNKKVRLINPPEQLLTLADLVNLSH 102 >gi|145300161|ref|YP_001143002.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas salmonicida subsp. salmonicida A449] gi|142852933|gb|ABO91254.1| sulfate transporter/antisigma-factor antagonist STAS [Aeromonas salmonicida subsp. salmonicida A449] Length = 108 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 T+ + +G +E+ + + + + +DLS ++E+D+ G +L++ + Sbjct: 12 TLVKISGEMTIYTAAELKQALTPLLYRQ---QALELDLSGVSEMDSAGLQLLLAAKKTMQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + H + + Sbjct: 69 QGDSPLHLVMHSHAVLDALEL 89 >gi|238064434|ref|ZP_04609143.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149] gi|237886245|gb|EEP75073.1| hypothetical protein MCAG_05400 [Micromonospora sp. ATCC 39149] Length = 135 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 2/88 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S+ + R G+ + + +V + + ++D + + ID+ G +I++ Sbjct: 21 LSDPDAPLIRVGGDLAFTTAAPLRREVDRQLAERPS--VLVLDFAGLRFIDSTGLSVIVH 78 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + + L +++ T Sbjct: 79 AWREGQQCDTAIRLRSTPRFLDTILDMT 106 >gi|302864821|ref|YP_003833458.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029] gi|302567680|gb|ADL43882.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029] Length = 118 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 34/95 (35%), Gaps = 2/95 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + V AG ++ D + ++K + + DL+ ++ D+ G + + Sbjct: 11 GDVVVVSVAGELDMATAPQLQDQITDLLDK--GRNRLVFDLAEVSFCDSTGLSVFVRAKN 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ + ++ + ++ + P Sbjct: 69 NCDEAGGVVRLAAPQRGVLRILEVSGLVEVLHTYP 103 >gi|303246824|ref|ZP_07333101.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] gi|302491841|gb|EFL51721.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] Length = 110 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 2/82 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V F+G + + + + K+ +DL+ +T ID+ G L++ ++ Sbjct: 22 VIAFSGEIDFSVTPAVRERLWELVGKA--GKHIELDLADLTYIDSSGLALLLELRKQLAE 79 Query: 68 KIKLQGVSTHIEQLFSLISFTH 89 + + + Q+ L + T Sbjct: 80 ADRTVAIRSISPQVRKLFNLTQ 101 >gi|239931434|ref|ZP_04688387.1| hypothetical protein SghaA1_24659 [Streptomyces ghanaensis ATCC 14672] Length = 210 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 12/114 (10%), Positives = 33/114 (28%), Gaps = 6/114 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G +A+ + + + D +D+S + +DT G E + Sbjct: 8 EADRALLVPRGELVRGCAHALAEKLARLPADTARVD---LDMSGVHFMDTAGLEFLDVLR 64 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113 + + + ++ L ++ P+ + + Sbjct: 65 DHGRRRSVPVTATRWNGQPRRILELAGLDTADPLRRPAPEGASARAASAVSLER 118 >gi|209809117|ref|YP_002264655.1| hypothetical protein, putative anti-sigma factor antagonist [Aliivibrio salmonicida LFI1238] gi|208010679|emb|CAQ81066.1| hypothetical protein, putative anti-sigma factor antagonist [Aliivibrio salmonicida LFI1238] Length = 105 Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S V G+ + +I + I + + +DL+ + +D+ G I+Y Sbjct: 8 SNTNTLVLSVQGDMDAVGCRDIQPTIDEVIEQ--EHRQVHIDLAQVAFLDSSGIGAIVYL 65 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 ++ +++Q +L L+ + + + Sbjct: 66 YKRLVEKERTMQIQNAHGQPLELLKLLRIENAIPVNSP 103 >gi|239926897|ref|ZP_04683850.1| putative anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291435243|ref|ZP_06574633.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291338138|gb|EFE65094.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] Length = 119 Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 6/99 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V +G + + V A ++DLS +T D+ G +++ Sbjct: 17 SGPYVLEVSGELDHHTAHSLTEAVDEA---PFDDHGVVLDLSGLTYCDSTGITVLITAYR 73 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + L GVS ++F ++ + Sbjct: 74 RSQATGSPLSLAGVSPDQMRVFQVVGLDQVFTFHPSTEE 112 >gi|157372589|ref|YP_001480578.1| anti-sigma-factor antagonist [Serratia proteamaculans 568] gi|157324353|gb|ABV43450.1| anti-sigma-factor antagonist [Serratia proteamaculans 568] Length = 99 Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + + + +D ++D++ + +D+ G L+++ E+ Sbjct: 12 TLILRGELDRETLLPLWEQRETLL-----ADITVLDVTQLQRVDSSGLALLVHLREQQRQ 66 Query: 68 KIKLQGVSTHIEQLFSLISF 87 +S ++L +LI+ Sbjct: 67 HGVELKISGASDRLKTLITL 86 >gi|315501106|ref|YP_004079993.1| anti-sigma-factor antagonist [Micromonospora sp. L5] gi|315407725|gb|ADU05842.1| anti-sigma-factor antagonist [Micromonospora sp. L5] Length = 118 Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 10/96 (10%), Positives = 33/96 (34%), Gaps = 2/96 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + V AG ++ D + ++K + DL+ ++ D+ G + + Sbjct: 10 RGDVVVVSVAGELDMATAPQLQDQITDLLDK--GRSRLVFDLAEVSFCDSTGLSVFVRAK 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ + ++ + ++ + P Sbjct: 68 NNCDEAGGVVRLAAPQRGVLRILEVSGLVEVLHTYP 103 >gi|330954309|gb|EGH54569.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae Cit 7] Length = 96 Score = 45.7 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S N + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 7 STNDTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVI 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFEL 89 >gi|83589261|ref|YP_429270.1| anti-sigma-factor antagonist domain-containing protein [Moorella thermoacetica ATCC 39073] gi|83572175|gb|ABC18727.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella thermoacetica ATCC 39073] Length = 109 Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E +V R AG I+++ ++ + +D SA+ +D+ GA L++ Sbjct: 11 EKDRSVLRVAGELDFSNINQLQQEIERQ-----DTKIVEIDCSALQFMDSSGAGLLLSIA 65 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + + ++ ++ E ++ + Sbjct: 66 RVLNLQNRILEITHIPEHIYHDLDII 91 >gi|15677792|ref|NP_274956.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58] gi|7227222|gb|AAF42291.1| hypothetical protein NMB1962 [Neisseria meningitidis MC58] gi|254670839|emb|CBA07268.1| STAS domain protein [Neisseria meningitidis alpha153] gi|308390060|gb|ADO32380.1| hypothetical protein NMBB_2245 [Neisseria meningitidis alpha710] gi|316985590|gb|EFV64537.1| hypothetical protein NMH_0136 [Neisseria meningitidis H44/76] gi|325127425|gb|EGC50356.1| hypothetical protein NMXN1568_1823 [Neisseria meningitidis N1568] gi|325139612|gb|EGC62152.1| hypothetical protein NMBCU385_2035 [Neisseria meningitidis CU385] gi|325201010|gb|ADY96465.1| conserved hypothetical protein [Neisseria meningitidis H44/76] Length = 92 Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 ILHIGGDITVKTLT--AAAFTRFRQQCRLKDTCAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|293394227|ref|ZP_06638527.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582] gi|291423205|gb|EFE96434.1| anti-sigma-factor antagonist [Serratia odorifera DSM 4582] Length = 100 Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 30/80 (37%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ + + + + VD++ + +D+ G L+++ + Sbjct: 13 TLVLSGDLDRETLLPLWQQRETLL-----AGKTAVDVAQLQRVDSSGLALLVHLRAQQQR 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + + ++L +LI+ Sbjct: 68 QGVELQIIGATDRLKTLITL 87 >gi|119469176|ref|ZP_01612160.1| putative anti-sigma B factor antagonist [Alteromonadales bacterium TW-7] gi|119447428|gb|EAW28696.1| putative anti-sigma B factor antagonist [Alteromonadales bacterium TW-7] Length = 97 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59 +S+ FR +G I + + + + + DLS ++ +DT G A LI Sbjct: 6 ISQIDDQQFRASGELSRNSIGD-EQLLNKQL--QTKHKTIYFDLSGVSRVDTAGLAWLIH 62 Query: 60 YF--MEKYHGKIKLQGVSTHIEQLFSL 84 F +++ +++LQ ++ L L Sbjct: 63 SFAELKQQGIRLELQNPPEQLQNLMQL 89 >gi|66044042|ref|YP_233883.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae B728a] gi|63254749|gb|AAY35845.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae B728a] gi|330971850|gb|EGH71916.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. aceris str. M302273PT] Length = 96 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S N + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 7 SANDTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVI 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 64 QREAGKTGTSLHLTGQSKAVSETFEL 89 >gi|116747919|ref|YP_844606.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB] gi|116696983|gb|ABK16171.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB] Length = 120 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 32/107 (29%), Gaps = 4/107 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 V G + I ++ + +DL+ + +DT G +++ + Sbjct: 11 RPVVELGGVLDRESVPGIRKVLLRLVKAK-GIKDLRIDLAEVERMDTSGVAMLVEVLRVL 69 Query: 64 -KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 GK+ L S ++ L + P + + Sbjct: 70 SARKGKVHLTNPSEPATRMIRLARLNGVFEQGASGPLAASGAGPQRR 116 >gi|326794030|ref|YP_004311850.1| sulfate transporter/antisigma-factor antagonist STAS [Marinomonas mediterranea MMB-1] gi|326544794|gb|ADZ90014.1| Sulfate transporter/antisigma-factor antagonist STAS [Marinomonas mediterranea MMB-1] Length = 109 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 5/97 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V AG I+E D + + + + DLS +T ID+ G I++ ++ Sbjct: 13 VLELAGEMDCVAIAENKDAIE--LIPTTFDGDIVFDLSKVTFIDSSGIGAIVFLFKRLRE 70 Query: 68 KIK---LQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + + L G++ ++L +L+ IK+ + Sbjct: 71 EERSLVLSGLNGQPKELMTLLRIDRAITIKDDVRSCA 107 >gi|271968053|ref|YP_003342249.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021] gi|270511228|gb|ACZ89506.1| anti-sigma-factor antagonist [Streptosporangium roseum DSM 43021] Length = 123 Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 5/104 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMYFM 62 + V +G+ ++ D+ A+ + ++DL+ + D+ G I + Sbjct: 20 VPVIALSGDLDFTNAEQLRADIQAAL--TPDHRDLVLDLTGLDFCDSTGIRIFLAIRKLL 77 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ G + L G+++ + ++F L H ++ S Sbjct: 78 QERGGAVALTGLNSRLTRIFRLTGLVHAFTVQPTAADAVTLLRS 121 >gi|328880418|emb|CCA53657.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV [Streptomyces venezuelae ATCC 10712] Length = 122 Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V AG +AD + + + ++DLSA+ +D+ G +++ + + Sbjct: 19 TAVLSVAGELDMDTAGRLADHLAEQLGEGRHH--LVLDLSALGFMDSSGLNVLIRSVHRA 76 Query: 66 HGKIKLQGVSTHIEQLFSLIS 86 ++ + ++ Sbjct: 77 REAGGDLYLAAPNPAVRRILE 97 >gi|283853373|ref|ZP_06370620.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] gi|283571241|gb|EFC19254.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] Length = 258 Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 5/96 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E+G T+ R AG+ + E+ + + + ++DLS + ID++G L++ Sbjct: 164 EDGQTILRPAGDIVASVTDELRTRLKEIMQGNP--GPLVIDLSRVELIDSVGIGLLIAAH 221 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 + K G++ L+ V+ + L + ++N Sbjct: 222 NTLSKKGGRLTLRHVNPDLASLLRTMRLDKHFAVEN 257 >gi|126175853|ref|YP_001052002.1| SpoIIAA family protein [Shewanella baltica OS155] gi|152999235|ref|YP_001364916.1| SpoIIAA family protein [Shewanella baltica OS185] gi|160873848|ref|YP_001553164.1| SpoIIAA family protein [Shewanella baltica OS195] gi|217971908|ref|YP_002356659.1| SpoIIAA family protein [Shewanella baltica OS223] gi|125999058|gb|ABN63133.1| SpoIIAA family protein [Shewanella baltica OS155] gi|151363853|gb|ABS06853.1| SpoIIAA family protein [Shewanella baltica OS185] gi|160859370|gb|ABX47904.1| SpoIIAA family protein [Shewanella baltica OS195] gi|217497043|gb|ACK45236.1| SpoIIAA family protein [Shewanella baltica OS223] gi|315266075|gb|ADT92928.1| SpoIIAA family protein [Shewanella baltica OS678] Length = 94 Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 TV G ++ + + +S Q I+ LS + D+ G ++ + ++ Sbjct: 8 GTVCHLKGRITQADVITLWPQRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVREH 63 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 +++L S +++L L Sbjct: 64 GSQLELSSASPQLKKLIDLYDLH 86 >gi|260428392|ref|ZP_05782371.1| membrane protein [Citreicella sp. SE45] gi|260422884|gb|EEX16135.1| membrane protein [Citreicella sp. SE45] Length = 83 Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 32/83 (38%) Query: 135 VISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFG 194 + + ++ + + + +G +PVV + + TG +A Q ++F Sbjct: 1 MAIFAARAASHIFRAPFYGREALNALLQIGWLSLPVVGMTALFTGGALALQIYSGGARFS 60 Query: 195 AEIFSIDLMSILQLREIGVLLTA 217 AE +++I +R+ Sbjct: 61 AEAVVPQIVAIGMVRDWARCWWG 83 >gi|168463465|ref|ZP_02697382.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633593|gb|EDX52007.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 98 Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG ++ + D V A + +DLS I+ +DT G L+ + + + Sbjct: 13 TLVLAGELDQDVLAPLWDARVEA-----TTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + +S +++++L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|304411201|ref|ZP_07392816.1| SpoIIAA family protein [Shewanella baltica OS183] gi|307306496|ref|ZP_07586239.1| SpoIIAA family protein [Shewanella baltica BA175] gi|304350394|gb|EFM14797.1| SpoIIAA family protein [Shewanella baltica OS183] gi|306910787|gb|EFN41215.1| SpoIIAA family protein [Shewanella baltica BA175] Length = 94 Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 TV G ++ + + +S Q I+ LS + D+ G ++ + ++ Sbjct: 8 GTVCHLKGRITQADVITLWPRRQQLLGESTQ----ILSLSGLEYSDSAGMAFLLALVREH 63 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 +++L S +++L L Sbjct: 64 GSQLELSSASPQLKKLIDLYDLH 86 >gi|167628450|ref|YP_001678949.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum Ice1] gi|167591190|gb|ABZ82938.1| anti-sigma f factor antagonist [Heliobacterium modesticaldum Ice1] Length = 115 Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 V R G + + I + ++ + +L + ID+ G I+ Sbjct: 7 GNALVVRLQGEIDLCAAEALRPRLDKEIERQ-KAKHLVFNLRGVDFIDSSGIGFILGRYK 65 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 ++ GK+ L G + + ++ L Sbjct: 66 RVKALGGKVALAGPTRSVHRIIEL 89 >gi|108800291|ref|YP_640488.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119869419|ref|YP_939371.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] gi|126435914|ref|YP_001071605.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] gi|108770710|gb|ABG09432.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119695508|gb|ABL92581.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] gi|126235714|gb|ABN99114.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] Length = 126 Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 33/111 (29%), Gaps = 3/111 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI---GAELI 58 + + R AG + SE D + + + +D + +T D+ G LI Sbjct: 9 AADRSATVRIAGELDAETTSEFVDTASRLLETNPGLRALRLDCADMTFCDSAGLSGLLLI 68 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + L T+ E++ + + + + Sbjct: 69 ERRTTAAGVDLHLDNRPTYFERVLDITGILEYIAGRRATSAPAPTEEPDGD 119 >gi|118581090|ref|YP_902340.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379] gi|118503800|gb|ABL00283.1| hypothetical protein Ppro_2679 [Pelobacter propionicus DSM 2379] Length = 130 Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAIN-KSIQSDSAIVDLSAITEIDTIGAELIM 59 +S +G T G+W + + + S ++ +D + I ID G +++ Sbjct: 2 VSYDGRTRVTLWGHWDLSSVIRQIELLSALRQLGSGGAERYSIDCAGIGSIDREGLQVLH 61 Query: 60 YFM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 +M + K +L + + + + +P R + +G+ Sbjct: 62 VWMQCARLHGLKPELSNLPAGMLETIQRLGLERCFADFYAEPAREMPKDEILAYFSPLGE 121 >gi|300702842|ref|YP_003744443.1| hypothetical protein RCFBP_10493 [Ralstonia solanacearum CFBP2957] gi|299070504|emb|CBJ41799.1| conserved protein of unknown function, STAS domain [Ralstonia solanacearum CFBP2957] Length = 104 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E I + ++++ Q+ + VD + +++ID+ +++ + Sbjct: 2 LTLSGPLTHREAPRILREGEAQLSQASQAGTMAVRVDCAGLSQIDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ E L +L + + P + ++ Sbjct: 62 AAGIALDIAAAPEALRNLATLYGVDALLAVAPATTASHHP 101 >gi|300785987|ref|YP_003766278.1| fused protein kinase and phosphatase containing multi-sensor domain [Amycolatopsis mediterranei U32] gi|299795501|gb|ADJ45876.1| fused protein kinase and phosphatase containing multi-sensor domain [Amycolatopsis mediterranei U32] Length = 899 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 1/75 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G + G+ I E+ V+ ++ + S +VDL+ + + + G L++ Sbjct: 799 GPLALKLTGDLDLATIGEVRPAVLASVEATAT-RSVVVDLTGLRYLSSCGVALLLDVAAV 857 Query: 65 YHGKIKLQGVSTHIE 79 + Sbjct: 858 ARRRGLAVTTRASAA 872 >gi|53804224|ref|YP_113888.1| anti-anti-sigma factor family protein [Methylococcus capsulatus str. Bath] gi|53757985|gb|AAU92276.1| anti-anti-sigma factor family protein [Methylococcus capsulatus str. Bath] Length = 114 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +++ + + G + ++ +++ + + + +VDLS + +D+ G +++ Sbjct: 7 TQDNVDIVELGGRLVMADAAQARSELLAVVRR--GTGRLVVDLSDVGFVDSSGLSVLIAA 64 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 +E+ GK+ L G+S I+ L L Sbjct: 65 FKAIEERSGKMVLAGLSPEIQALLELTRLNE 95 >gi|330810306|ref|YP_004354768.1| hypothetical protein PSEBR_a3440 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378414|gb|AEA69764.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 94 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + G +++A + + + + +DLS ITE+D G +L++ Sbjct: 7 THDDTAQVHIDGELTIYTAADLAAQWLPHLGATPR---MALDLSQITEMDGAGLQLLLMV 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + ++ Sbjct: 64 QREAAKAGTQLTLTGQSKAVTETLAL 89 >gi|256392581|ref|YP_003114145.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256358807|gb|ACU72304.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 115 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V AG+ + +V A S ++D S IT +D++G ++++ ++ Sbjct: 12 GRVVLAVAGDVDLAAHTRFEAEVEQA---WDGSTDLVIDCSGITFLDSMGLRVLVHTKQR 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 ++ + + ++ + + + S Sbjct: 69 ADETGHSVVLAAPSDPVLRVLDLAGIRSLFPEVDPVSDAEP 109 >gi|15639529|ref|NP_218979.1| anti-sigma F factor antagonist (SpoIIAA-2) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025768|ref|YP_001933540.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum SS14] gi|3322830|gb|AAC65524.1| anti-sigma F factor antagonist (spoIIAA-2) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018343|gb|ACD70961.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum SS14] Length = 123 Score = 45.0 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 5/107 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 GI V +G+ ++ D V+ ++ ++DL A+ ID+ G +++Y Sbjct: 10 SGGICVVDISGDMDLYHSYKLKDLVLKLFDRGP--RCIVIDLEAVEYIDSSGIGVLIYLC 67 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 +K + GV ++++ L + I + S Sbjct: 68 STVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 114 >gi|269126863|ref|YP_003300233.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268311821|gb|ACY98195.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 106 Score = 45.0 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G+ E+ + + + +VDL+A+ D+ G +++ + Sbjct: 11 DDRVTVTVRGSIDLHSSDELRERLKSLVEA--GHRQIVVDLAAVDFCDSSGLNVLVRTYK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 + + + V+ ++ +++ T Sbjct: 69 QAREQGGVLTVTGAYGRVENVLRTT 93 >gi|16762071|ref|NP_457688.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766604|ref|NP_462219.1| hypothetical protein STM3309 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143560|ref|NP_806902.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161616319|ref|YP_001590284.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552041|ref|ZP_02345794.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994502|ref|ZP_02575593.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168238011|ref|ZP_02663069.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243145|ref|ZP_02668077.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262678|ref|ZP_02684651.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194445872|ref|YP_002042567.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450078|ref|YP_002047338.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194738002|ref|YP_002116259.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249208|ref|YP_002148234.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262522|ref|ZP_03162596.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200386608|ref|ZP_03213220.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|213024118|ref|ZP_03338565.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213053029|ref|ZP_03345907.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419092|ref|ZP_03352158.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426648|ref|ZP_03359398.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213584874|ref|ZP_03366700.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646984|ref|ZP_03377037.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289825819|ref|ZP_06544987.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25512337|pir||AD0904 probable anti-sigma factor antagonist [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421866|gb|AAL22178.1| putative STAS domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504374|emb|CAD07826.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi] gi|29139195|gb|AAO70762.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161365683|gb|ABX69451.1| hypothetical protein SPAB_04127 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404535|gb|ACF64757.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408382|gb|ACF68601.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194713504|gb|ACF92725.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197212911|gb|ACH50308.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240777|gb|EDY23397.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289068|gb|EDY28437.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199603706|gb|EDZ02251.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323215|gb|EDZ11054.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327642|gb|EDZ14406.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205337858|gb|EDZ24622.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348546|gb|EDZ35177.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248474|emb|CBG26311.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995508|gb|ACY90393.1| hypothetical protein STM14_3997 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159858|emb|CBW19377.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914336|dbj|BAJ38310.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225267|gb|EFX50326.1| hypothetical protein YrbB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131669|gb|ADX19099.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 98 Score = 45.0 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG ++ + D V A+N +DLS I+ +DT G L+ + + + Sbjct: 13 TLVLAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + +S +++++L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|238062147|ref|ZP_04606856.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149] gi|237883958|gb|EEP72786.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149] Length = 118 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 10/96 (10%), Positives = 33/96 (34%), Gaps = 2/96 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + V AG ++ D + ++K + DL+ ++ D+ G + + Sbjct: 10 RGDVVVVSVAGELDMATAPQLQDQITDLLDK--GRSRLVFDLTEVSFCDSTGLSVFVRAK 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ + ++ + ++ + P Sbjct: 68 NSCDEAGGVVRLAAPQRGVLRILEVSGLVEVLHTYP 103 >gi|117923942|ref|YP_864559.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1] gi|117607698|gb|ABK43153.1| anti-sigma-factor antagonist [Magnetococcus sp. MC-1] Length = 105 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G+ + +E+ + V A+ DS +++LS +T ID G +++ Sbjct: 7 EGSSARLQLTGDLTIQQAAELKESCVQAVQS---GDSLVLNLSGVTRIDLAGLQILCAMH 63 Query: 63 EKYHGKIKLQGVSTHIEQ 80 + K + I + Sbjct: 64 RALVDEGKSLTLQGEIPK 81 >gi|291059916|gb|ADD72651.1| anti-sigma F factor antagonist [Treponema pallidum subsp. pallidum str. Chicago] Length = 121 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 5/107 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 GI V +G+ ++ D V+ ++ ++DL A+ ID+ G +++Y Sbjct: 8 SGGICVVDISGDMDLYHSYKLKDLVLKLFDRGP--RCIVIDLEAVEYIDSSGIGVLIYLC 65 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 +K + GV ++++ L + I + S Sbjct: 66 STVKKLKIHFFISGVHGSVKKVIELTRLLNYFPIAESVDEALARARS 112 >gi|145595097|ref|YP_001159394.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora tropica CNB-440] gi|145304434|gb|ABP55016.1| Sulfate transporter/antisigma-factor antagonist STAS [Salinispora tropica CNB-440] Length = 176 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 3/96 (3%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75 + + + AI +VDLSA+ +ID++G L++ ++ + + Sbjct: 84 TAATPDPLRTALDEAIE---HEGRVVVDLSAVEQIDSVGLGLLVRARQEARQRGAELCLH 140 Query: 76 THIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 + +++ N K L Sbjct: 141 APSRFVLTVLHTMRLDAAFPVVTDHPDATNQPKVLV 176 >gi|315506297|ref|YP_004085184.1| sulfate transporter/antisigma-factor antagonist stas [Micromonospora sp. L5] gi|315412916|gb|ADU11033.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora sp. L5] Length = 123 Score = 45.0 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R AG E+ D V A + +D + + D+ G ++ Sbjct: 24 GSARVRLAGELDFDTAPELVDAV--AGLRRDGHQELELDFAGVDLCDSSGLSALVVIHRA 81 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 G I+L ++ I L Q+ Sbjct: 82 GTGAIRLLNLNPQIRHLLDRTGLAELLAAPPQE 114 >gi|33151496|ref|NP_872849.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi 35000HP] gi|33147716|gb|AAP95238.1| putative anti-sigma factor B antagonist [Haemophilus ducreyi 35000HP] Length = 113 Score = 45.0 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +NG G + + + + +++ DL+ + ID+ G L++ + Sbjct: 14 QNGSLFVTLLGELTRDTLLPLWKQ-RASFLSNPHNETIYWDLNHLLRIDSAGFALLIELL 72 Query: 63 E 63 Sbjct: 73 N 73 >gi|119776209|ref|YP_928949.1| SpoIIAA family protein [Shewanella amazonensis SB2B] gi|119768709|gb|ABM01280.1| SpoIIAA family protein [Shewanella amazonensis SB2B] Length = 96 Score = 45.0 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 AG + + ++ +V + +D++ +DL ++ D+ G ++ ++ Sbjct: 8 GNTLSVAGRLDAAVVKQLWPEVATLV----PADTSCLDLRQLSYSDSAGVAFLLELWQRA 63 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 H + + + + QL LI+ Sbjct: 64 HSRGQSITLMSPSPQLGKLIAL 85 >gi|156741105|ref|YP_001431234.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941] gi|156232433|gb|ABU57216.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941] Length = 117 Score = 45.0 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 ++GIT+ R G +++ + + I DL ++ +D+ G ++ Sbjct: 9 DDGITIVRMDGRLDLVTAAQVKQQLTELVAS--GHRRLIFDLDRVSFVDSSGLGALISGL 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + G +++ + + L +L + Sbjct: 67 KVARQAGGDLRIARANQQVRTLLNLTMLERVLRP 100 >gi|271961736|ref|YP_003335932.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM 43021] gi|270504911|gb|ACZ83189.1| anti-sigma F factor antagonist [Streptosporangium roseum DSM 43021] Length = 117 Score = 44.6 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 32/85 (37%), Gaps = 1/85 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S G TV G + + + +S + ++D+S + D+ G +++ Sbjct: 9 SHAGHTVMTIVGEIDLYTAPGLQSEFTRLLQESPTT-YVVIDMSGVEFCDSTGMNVLLSA 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 +++ + ++ + ++ Sbjct: 68 LKRLKERGGTLELAAPRPAVRKILQ 92 >gi|312961185|ref|ZP_07775690.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas fluorescens WH6] gi|311284843|gb|EFQ63419.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas fluorescens WH6] Length = 112 Score = 44.6 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 3/98 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 GI G ++E+A ++ + + + +DLS +TEID G +L+ Sbjct: 9 EGIARVGIEGELTIYTVAELAAEL---LPQLGTAPRLELDLSQVTEIDGAGLQLLAVIHR 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + + + + + P + Sbjct: 66 EAAAGGTPVSLVGQSQAVTQTLQLCAALSFSAPYPDQR 103 >gi|182440614|ref|YP_001828333.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] gi|178469130|dbj|BAG23650.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] Length = 136 Score = 44.6 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 26/85 (30%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G G+ + ++V + + + + +D+ G ++ Sbjct: 16 EGSIRIGLQGDLDYDSADHLLNEVTAHLAARPALTDLHLHCAELDTVDSTGLSALLMISR 75 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 + G + E+L L+ T Sbjct: 76 RTSGAGVRLHLDARPERLDRLLHLT 100 >gi|325131368|gb|EGC54077.1| hypothetical protein NMBM6190_1870 [Neisseria meningitidis M6190] gi|325133420|gb|EGC56084.1| hypothetical protein NMBM13399_1939 [Neisseria meningitidis M13399] gi|325137486|gb|EGC60071.1| hypothetical protein NMBES14902_1850 [Neisseria meningitidis ES14902] gi|325141488|gb|EGC63961.1| hypothetical protein NMB9615945_1901 [Neisseria meningitidis 961-5945] gi|325199051|gb|ADY94507.1| conserved hypothetical protein [Neisseria meningitidis G2136] gi|325206867|gb|ADZ02320.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 92 Score = 44.6 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ + + ++ VD + D+ L++ + G Sbjct: 9 TLHISGDITVKTLTG--EAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|117620668|ref|YP_855579.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562075|gb|ABK39023.1| anti-sigma-B factor antagonist [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 108 Score = 44.6 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV AG +E+ + + + +DLS ++E+D+ G +L++ + Sbjct: 12 TVVTIAGEMTIYTAAELKQALTPLLYRQ---QELELDLSQVSEMDSAGLQLLLAAKKTAL 68 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + H + + Sbjct: 69 QGGYPLHLVMHSHAVLDALEL 89 >gi|326318249|ref|YP_004235921.1| sulfate transporter/antisigma-factor antagonist STAS [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375085|gb|ADX47354.1| Sulfate transporter/antisigma-factor antagonist STAS [Acidovorax avenae subsp. avenae ATCC 19860] Length = 105 Score = 44.6 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 2/84 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 IT G +E ++ A++ S + +DL+ +TEID+ G +L+M Sbjct: 4 ITTLALDGELTIYRAAETRTGLLAALSDSPEG--LEIDLAGVTEIDSAGVQLLMAARRDA 61 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 + + + + +++ Sbjct: 62 QARGQWLRFTGCNAPVSEVLALFD 85 >gi|254507964|ref|ZP_05120092.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16] gi|219549072|gb|EED26069.1| anti-anti-sigma regulatory factor [Vibrio parahaemolyticus 16] Length = 106 Score = 44.6 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 4/99 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + + GN + S A + I +D S + +D+ G I+Y Sbjct: 8 ASDTVLTLVINGNLDAAG-SRSAQPHIDEIIADKSDREIEIDFSQVQFLDSSGVGAIVYL 66 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++ ++L+ VS ++ +L+ + + K Sbjct: 67 YKRLIERQRGMRLENVSGQPLEIMNLLRIDQAIPVNSSK 105 >gi|319409729|emb|CBY90035.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594] Length = 92 Score = 44.6 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 9 ILHIGGDITVKTLT--AAAFTRFRQQCRLKDTRAVDLSGVGRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|315179035|gb|ADT85949.1| anti-sigma B factor antagonist, hypothetical [Vibrio furnissii NCTC 11218] Length = 109 Score = 44.6 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 3/101 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G + +G + E+ + Q+ + L ++T ID+ G ++++ +E Sbjct: 10 GPALAALSGPLDRDTVPELWAVLQQW---QPQNAECELSLKSVTRIDSAGMVMLIHLLEH 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + +S EQL +L ++ + +Q ++ N Sbjct: 67 AKKQNCHIMLSFVPEQLRTLFQLSNIDAMMSQHIKQPAGVN 107 >gi|300787020|ref|YP_003767311.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299796534|gb|ADJ46909.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 114 Score = 44.6 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 25/86 (29%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G AG+ + + V + +D + D+ ++ + Sbjct: 13 EEGTARVTIAGDLEFATTGTLLRLVTDRLAACPGVREVRLDCGELGFCDSSELLKVLRVV 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 +++L E+L + Sbjct: 73 ADAGARLRLDHRRAAPERLLTRTGTA 98 >gi|217969737|ref|YP_002354971.1| anti-sigma-factor antagonist [Thauera sp. MZ1T] gi|217507064|gb|ACK54075.1| anti-sigma-factor antagonist [Thauera sp. MZ1T] Length = 111 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ G ++ + + + A+ ++ +DL I EIDT G +L++ Sbjct: 12 GVARLAPEGELGIYTVAALREAWLQALA---THEALEIDLGRIDEIDTAGLQLMLMAKRS 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 ++ S + +L L Sbjct: 69 VGRSVRFVNHSAAVLRLLDLARL 91 >gi|121635617|ref|YP_975862.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18] gi|120867323|emb|CAM11094.1| hypothetical protein NMC1934 [Neisseria meningitidis FAM18] gi|325143671|gb|EGC65990.1| hypothetical protein NMBM01240013_1912 [Neisseria meningitidis M01-240013] Length = 100 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ + + ++ VD + D+ L++ + G Sbjct: 17 TLHISGDITVKTLTG--EAFERFQQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 74 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 75 SVRLTGIPESVRALSELYE 93 >gi|21233628|ref|NP_639545.1| hypothetical protein XCC4211 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770593|ref|YP_245355.1| hypothetical protein XC_4300 [Xanthomonas campestris pv. campestris str. 8004] gi|21115497|gb|AAM43427.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575925|gb|AAY51335.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 102 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 34/89 (38%), Gaps = 7/89 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 +G ++++ + + + + +DLS + +D+ G ++ + Sbjct: 18 TLAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAELAARLRS 72 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 73 NGNGTVVGKASGLDELCAAYRLSPSLDFQ 101 >gi|213970197|ref|ZP_03398328.1| STAS domain protein [Pseudomonas syringae pv. tomato T1] gi|302060004|ref|ZP_07251545.1| STAS domain protein [Pseudomonas syringae pv. tomato K40] gi|302130894|ref|ZP_07256884.1| STAS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925078|gb|EEB58642.1| STAS domain protein [Pseudomonas syringae pv. tomato T1] Length = 96 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 3/85 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + I + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 8 RDDIAHMQIDGELTIYTVTELAARL---LPQIAGAARVEVDLSHVTEMDGAGLQLLAVIQ 64 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 65 REAGKTGTALHLTGQSQAVTETFEL 89 >gi|294139197|ref|YP_003555175.1| SpoIIAA family protein [Shewanella violacea DSS12] gi|293325666|dbj|BAJ00397.1| SpoIIAA family protein [Shewanella violacea DSS12] Length = 100 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 +V +G ++ ++ ++ +I+ ++DLSA+T D+ G I+ + Sbjct: 9 SVCCISGRLSQGDVVKLWGKRKRLLSDNIK----VIDLSALTYSDSAGIAFILELIALSK 64 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + + +S+ QL LI + +++ ++ Sbjct: 65 QQGREITLSSASSQLSKLIGLYDLEHFFDEEVKKG 99 >gi|225174856|ref|ZP_03728853.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1] gi|225169496|gb|EEG78293.1| anti-sigma-factor antagonist [Dethiobacter alkaliphilus AHT 1] Length = 111 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 4/99 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 V R G + I D + + + + + S + +D+ G +++ Sbjct: 9 GNTLVVRMTGELDHHAVDGIRDRLDRKLAVE-HIKNVVFNFSGVQFMDSSGLGMVLGRYK 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + GK+ +S + ++F L R + + + Sbjct: 68 LISEKGGKVLACSLSPRVSRVFDLAGLQSRIPVFASEAE 106 >gi|78355071|ref|YP_386520.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217476|gb|ABB36825.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 105 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 4/93 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S+NG + G +++ + I S + ++D+ ++ ID+ G L++ Sbjct: 8 ISDNGALILE--GEIDYSVAAQVRTALHRHIESS--GGAVVLDMEKVSYIDSTGLALLIE 63 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 K + + +S ++ L T I Sbjct: 64 LRRKLQEQSREIRISAASVRVRQLFELTQIAPI 96 >gi|307718375|ref|YP_003873907.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192] gi|306532100|gb|ADN01634.1| anti-anti-sigma factor [Spirochaeta thermophila DSM 6192] Length = 130 Score = 44.6 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 5/110 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + +G + I D + + + DL +T ID+ G ++Y ++ Sbjct: 13 ILSLSGELDLYQAPRIKDMLQKVFPEHPA--RIVFDLDGLTYIDSSGIGALLYAYSEAKR 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 L + ++++ L H I + S + + Sbjct: 71 RDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120 >gi|256379100|ref|YP_003102760.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255923403|gb|ACU38914.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 108 Score = 44.6 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 9/96 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 V G + + ++D + + +VDL+ +T +DT G L++ + Sbjct: 10 RGDWKVVVVTGELDADTVPVLSDHLEE-----TPARRIVVDLAGVTFMDTTGLSLVLDWH 64 Query: 63 EKY----HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 + G +L + + +LF L +I Sbjct: 65 RRLVDTGAGDFRLASLQPSVHKLFRLTELVDVMRIH 100 >gi|238756120|ref|ZP_04617441.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473] gi|238705659|gb|EEP98055.1| Anti-sigma B factor antagonist [Yersinia ruckeri ATCC 29473] Length = 100 Score = 44.6 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 33/81 (40%), Gaps = 5/81 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G+ + + + +D +D++ + +D+ G L+++ E+ H Sbjct: 12 HTLLLIGDLDRETLMPLWQQRETLL-----ADKTCLDVAQLQRVDSSGLALLVHLREEQH 66 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + +S ++L +LI+ Sbjct: 67 QRGSDLIISGVSDRLATLITL 87 >gi|220904524|ref|YP_002479836.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868823|gb|ACL49158.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 117 Score = 44.6 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 1/88 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +TV R+ G+ P++ + + + + ++DLS + +DT G +++ Sbjct: 8 SHKNVTVLRYLGDMLLPDVPQFSRQLEAYLLA-PGIRQVVLDLSHVNRVDTSGLGVLVSA 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTH 89 K G + + T + L+ Sbjct: 67 STKSRGHGRRLVLLTPAPHVVELLKKVE 94 >gi|209694104|ref|YP_002262032.1| conserved hypothetical protein containing [Aliivibrio salmonicida LFI1238] gi|208008055|emb|CAQ78194.1| conserved hypothetical protein containing [Aliivibrio salmonicida LFI1238] Length = 106 Score = 44.6 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 3/85 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F G + + + + + + VDL+ + ID+ G L+++ +E + Sbjct: 14 ISFKGTLDRETVPNLWNKLTEW---KPKLEQVKVDLTHVNRIDSAGVVLLLHLIEHAKKQ 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93 ++ +QL +LI ++ + + Sbjct: 71 NCHIMLAFVPDQLITLIQLSNVESL 95 >gi|62181817|ref|YP_218234.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168231920|ref|ZP_02656978.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168819621|ref|ZP_02831621.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194470672|ref|ZP_03076656.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|198244440|ref|YP_002217280.1| hypothetical protein SeD_A3668 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204931203|ref|ZP_03221997.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354210|ref|YP_002228011.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858557|ref|YP_002245208.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224585106|ref|YP_002638905.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910103|ref|ZP_04653940.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|62129450|gb|AAX67153.1| putative STAS domain [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194457036|gb|EDX45875.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197938956|gb|ACH76289.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204319970|gb|EDZ05176.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273991|emb|CAR38997.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205333847|gb|EDZ20611.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205343356|gb|EDZ30120.1| putative stas domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710360|emb|CAR34718.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469634|gb|ACN47464.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320087754|emb|CBY97518.1| Uncharacterized protein yrbB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615313|gb|EFY12234.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618328|gb|EFY15219.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622867|gb|EFY19711.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626811|gb|EFY23608.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631380|gb|EFY28140.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635353|gb|EFY32067.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643352|gb|EFY39916.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647076|gb|EFY43577.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648879|gb|EFY45324.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655071|gb|EFY51382.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657674|gb|EFY53942.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664170|gb|EFY60368.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667453|gb|EFY63615.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674701|gb|EFY70793.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675666|gb|EFY71739.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682302|gb|EFY78325.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684905|gb|EFY80903.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716306|gb|EFZ07877.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323195890|gb|EFZ81061.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199007|gb|EFZ84104.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204293|gb|EFZ89302.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207640|gb|EFZ92587.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211307|gb|EFZ96151.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214751|gb|EFZ99500.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221231|gb|EGA05657.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224028|gb|EGA08321.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230323|gb|EGA14442.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233299|gb|EGA17393.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239336|gb|EGA23386.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242413|gb|EGA26439.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246923|gb|EGA30889.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254144|gb|EGA37964.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255261|gb|EGA39038.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262724|gb|EGA46280.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264034|gb|EGA47542.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269420|gb|EGA52875.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625059|gb|EGE31404.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629332|gb|EGE35675.1| STAS domain-containing protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 98 Score = 44.6 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG ++ + D V A + +DLS I+ +DT G L+ + + + Sbjct: 13 TLVLAGELDQDVLAPLWDARVEA-----MTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + +S +++++L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|223986125|ref|ZP_03636148.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM 12042] gi|223961930|gb|EEF66419.1| hypothetical protein HOLDEFILI_03456 [Holdemania filiformis DSM 12042] Length = 167 Score = 44.6 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ +F F G+ + I +I DV+ I++ +Q+ D +T ID+ G ++ Sbjct: 64 QDDALIFAFCGDLDNLSILKIKADVIREIDR-VQAPVVKFDFKDVTFIDSTGIGFLLARY 122 Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84 + G++ L+ +S I +LF+L Sbjct: 123 NQVQSYRGELILKNISPAIRRLFAL 147 >gi|261250146|ref|ZP_05942722.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891] gi|260939262|gb|EEX95248.1| hypothetical protein VIA_000166 [Vibrio orientalis CIP 102891] Length = 109 Score = 44.6 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NG F +G+ + ++ + + V L + +ID+ G ++++ +E Sbjct: 9 NGAAEFALSGDLNRESVPKLWSSLKQ---QQWPGSEVEVSLQQLKKIDSAGMVMLIHLIE 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 + +S ++L +L + Sbjct: 66 HAKKQNCHIMLSFVPDELRTLFQLS 90 >gi|89899708|ref|YP_522179.1| anti-sigma-factor antagonist domain-containing protein [Rhodoferax ferrireducens T118] gi|89344445|gb|ABD68648.1| anti-sigma-factor antagonist (STAS) domain protein [Rhodoferax ferrireducens T118] Length = 121 Score = 44.6 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63 +V R G +E+ ++ +DLS +TE+DT G +L+M + Sbjct: 12 SVLRIEGELTIFRAAELKPLLLAEPMAQA------IDLSGVTELDTAGVQLLMLAKKMAL 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 K+ L S + ++F L++ Sbjct: 66 ATQRKLSLVAHSPAVIEVFELLNLA 90 >gi|320010157|gb|ADW05007.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331] Length = 129 Score = 44.2 bits (103), Expect = 0.029, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 23/82 (28%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R G+ ++ + + + ++D S + D+ G ++ Sbjct: 18 GAVRLRLVGDLDYDTSEQLVERAQACLAADPAPQTLVLDCSGLHMCDSSGVSALLLIHRG 77 Query: 65 YHGKIKLQGVSTHIEQLFSLIS 86 + + L + Sbjct: 78 TSPGGVVLQLWNAPRFLLRTLE 99 >gi|28868134|ref|NP_790753.1| STAS domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851371|gb|AAO54448.1| STAS domain protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331018816|gb|EGH98872.1| STAS domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 96 Score = 44.2 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 3/85 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + I + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 8 RDDIAHMQIDGELTIYTVTELAARL---LPQIAGAARVEVDLSRVTEMDGAGLQLLAVIQ 64 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 65 REAGKTGTALHLTGQSQAVTETFEL 89 >gi|183219914|ref|YP_001837910.1| putative anti-sigma-B factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910038|ref|YP_001961593.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774714|gb|ABZ93015.1| Anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778336|gb|ABZ96634.1| Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 112 Score = 44.2 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 NGI V + GN + + + + ++S I DL ++ ID+ G LIM Sbjct: 8 SNGIVVLKLFGNLDMLNAGILKERIKESASQS--EHRFIFDLEGVSFIDSSGFGLIMSLN 65 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84 + + G +++ VS I Q+F + Sbjct: 66 DKLTELGGGLRIVNVSKTIRQIFRI 90 >gi|50119259|ref|YP_048426.1| hypothetical protein ECA0299 [Pectobacterium atrosepticum SCRI1043] gi|49609785|emb|CAG73219.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 96 Score = 44.2 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64 + G+ + + + +D+S + +D+ G L+M+ ++ Sbjct: 12 STLALTGDLDRETLLPFWQQRESLL-----AGKTTLDVSGLNRVDSAGLALLMHVYQQPS 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 G+I + G S ++ L +L + Sbjct: 67 SGGEIAIVGASDRLKTLIALYNLNE 91 >gi|260770989|ref|ZP_05879918.1| predicted NTP binding protein (contains STAS domain) [Vibrio furnissii CIP 102972] gi|260614226|gb|EEX39416.1| predicted NTP binding protein (contains STAS domain) [Vibrio furnissii CIP 102972] Length = 109 Score = 44.2 bits (103), Expect = 0.031, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 3/101 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G + +G + E+ + Q+ + L ++T ID+ G ++++ +E Sbjct: 10 GPALAALSGPLDRDTVPELWAVLQQW---HPQNAECELSLKSVTRIDSAGMVMLIHLLEH 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + +S EQL +L ++ + +Q ++ N Sbjct: 67 AKKQNCHIMLSFVPEQLRTLFQLSNIDAMMSQHIKQPAGVN 107 >gi|22124062|ref|NP_667485.1| hypothetical protein y0142 [Yersinia pestis KIM 10] gi|45443557|ref|NP_995096.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar Microtus str. 91001] gi|51597807|ref|YP_071998.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis IP 32953] gi|108809723|ref|YP_653639.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua] gi|108813613|ref|YP_649380.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516] gi|145597642|ref|YP_001161718.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F] gi|153947165|ref|YP_001399445.1| anti-anti-sigma factor [Yersinia pseudotuberculosis IP 31758] gi|153997346|ref|ZP_02022446.1| putative anti-sigma B factor antagonist [Yersinia pestis CA88-4125] gi|162420439|ref|YP_001605688.1| putative anti-anti-sigma factor [Yersinia pestis Angola] gi|165928100|ref|ZP_02223932.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. F1991016] gi|165937544|ref|ZP_02226107.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. IP275] gi|166011338|ref|ZP_02232236.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. E1979001] gi|166212160|ref|ZP_02238195.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. B42003004] gi|167400702|ref|ZP_02306211.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420516|ref|ZP_02312269.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426997|ref|ZP_02318750.1| putative anti-anti-sigma factor [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470185|ref|ZP_02334889.1| putative anti-anti-sigma factor [Yersinia pestis FV-1] gi|170022767|ref|YP_001719272.1| putative anti-sigma B factor antagonist [Yersinia pseudotuberculosis YPIII] gi|186896999|ref|YP_001874111.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis PB1/+] gi|218930583|ref|YP_002348458.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92] gi|229836873|ref|ZP_04457038.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A] gi|229839227|ref|ZP_04459386.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899792|ref|ZP_04514933.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis str. India 195] gi|229904107|ref|ZP_04519218.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516] gi|270488542|ref|ZP_06205616.1| anti-anti-sigma factor [Yersinia pestis KIM D27] gi|294505307|ref|YP_003569369.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003] gi|21956809|gb|AAM83736.1|AE013614_10 hypothetical protein y0142 [Yersinia pestis KIM 10] gi|45438426|gb|AAS63973.1| putative anti-sigma B factor antagonist [Yersinia pestis biovar Microtus str. 91001] gi|51591089|emb|CAH22753.1| Putative anti-sigma B factor antagonist [Yersinia pseudotuberculosis IP 32953] gi|108777261|gb|ABG19780.1| anti-sigma B factor antagonist [Yersinia pestis Nepal516] gi|108781636|gb|ABG15694.1| putative anti-sigma B factor antagonist [Yersinia pestis Antiqua] gi|115349194|emb|CAL22159.1| putative anti-sigma B factor antagonist [Yersinia pestis CO92] gi|145209338|gb|ABP38745.1| anti-sigma B factor antagonist [Yersinia pestis Pestoides F] gi|149288983|gb|EDM39063.1| putative anti-sigma B factor antagonist [Yersinia pestis CA88-4125] gi|152958660|gb|ABS46121.1| putative anti-anti-sigma factor [Yersinia pseudotuberculosis IP 31758] gi|162353254|gb|ABX87202.1| putative anti-anti-sigma factor [Yersinia pestis Angola] gi|165914649|gb|EDR33263.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. IP275] gi|165919874|gb|EDR37175.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. F1991016] gi|165989722|gb|EDR42023.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. E1979001] gi|166206906|gb|EDR51386.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. B42003004] gi|166961322|gb|EDR57343.1| putative anti-anti-sigma factor [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050070|gb|EDR61478.1| putative anti-anti-sigma factor [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054037|gb|EDR63865.1| putative anti-anti-sigma factor [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749301|gb|ACA66819.1| putative anti-sigma B factor antagonist [Yersinia pseudotuberculosis YPIII] gi|186700025|gb|ACC90654.1| anti-sigma B factor antagonist [Yersinia pseudotuberculosis PB1/+] gi|229678225|gb|EEO74330.1| hypothetical protein YP516_3926 [Yersinia pestis Nepal516] gi|229687284|gb|EEO79359.1| hypothetical protein YPF_4291 [Yersinia pestis biovar Orientalis str. India 195] gi|229695593|gb|EEO85640.1| hypothetical protein YPH_1508 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705816|gb|EEO91825.1| hypothetical protein YPS_0770 [Yersinia pestis Pestoides A] gi|262363370|gb|ACY60091.1| putative anti-sigma B factor antagonist [Yersinia pestis D106004] gi|262367252|gb|ACY63809.1| putative anti-sigma B factor antagonist [Yersinia pestis D182038] gi|270337046|gb|EFA47823.1| anti-anti-sigma factor [Yersinia pestis KIM D27] gi|294355766|gb|ADE66107.1| putative anti-sigma B factor antagonist [Yersinia pestis Z176003] gi|320017113|gb|ADW00685.1| hypothetical protein YPC_4285 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 100 Score = 44.2 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + + +D + +D+S + +D+ G L+++F E Sbjct: 13 TLVLQGELDRETLLPLWQQRETLL-----ADKSRIDVSQLQRVDSSGLALLVHFRELQSQ 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + + +L +LI Sbjct: 68 RGHSLEIIGISNRLATLIEL 87 >gi|302542614|ref|ZP_07294956.1| putative STAS domain protein [Streptomyces hygroscopicus ATCC 53653] gi|302460232|gb|EFL23325.1| putative STAS domain protein [Streptomyces himastatinicus ATCC 53653] Length = 116 Score = 44.2 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 5/89 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+TV AG I+ + ++DL +T +D G L+ Sbjct: 16 GGVTVAEIAGELDIFAAGRISARLDSL--ARTGCPDLVLDLRQVTFLDCAGVSLLCRLRN 73 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTH 89 + G+++L V +L ++ Sbjct: 74 RVLEREGRLRLVIVDPRFLRLLRMVRLED 102 >gi|302519937|ref|ZP_07272279.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] gi|318056975|ref|ZP_07975698.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actG] gi|318081223|ref|ZP_07988555.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actF] gi|302428832|gb|EFL00648.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] Length = 124 Score = 44.2 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 +G V R AG + V A+ + S ++DLS + D+ G +++ Sbjct: 10 RDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSEVHFCDSSGVGVLIAAR 67 Query: 60 YFMEKYHGKIKLQ 72 M HG++++ Sbjct: 68 RLMRSCHGRLRIV 80 >gi|114321368|ref|YP_743051.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1] gi|114227762|gb|ABI57561.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1] Length = 109 Score = 44.2 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 3/100 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S F+ +G+ + + + S +DL A+ D+ G L++ Sbjct: 13 STGEAGRFQLSGDLSFETVPGLWAEAERLFR---GSGDVELDLGAVARTDSAGLALLVAL 69 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + + EQL ++ + P+++ Sbjct: 70 TRRAAQHDQAIRFCHFPEQLRAMARLSGLADFLQLAPEKA 109 >gi|229822117|ref|YP_002883643.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] gi|229568030|gb|ACQ81881.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] Length = 128 Score = 44.2 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 3/100 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + T AG ++AD V A + + +D + + +D+ G L+ Sbjct: 21 TTDDRTRIVLAGEIDVSLAGDLADAVGRA---ELAGNPTEIDAAQVAFMDSSGIALLARV 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + G++ + + L + + + P Sbjct: 78 ATRTPGRLAIISPPDVVRFLLEVTRIGDMVDVLDIDPGFP 117 >gi|227326641|ref|ZP_03830665.1| hypothetical protein PcarcW_04679 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 100 Score = 44.2 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64 + G+ + + + +D+S + +D+ G L+M+ ++ Sbjct: 16 STLALTGDLDRETLLPFWQQRESLL-----AGKTTLDVSGLNRVDSAGLALLMHVYQQPS 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 G+I + G S ++ L +L + Sbjct: 71 SGGEITIVGASDRLKTLIALYNLNE 95 >gi|227112744|ref|ZP_03826400.1| hypothetical protein PcarbP_07269 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 96 Score = 44.2 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64 + G+ + + + +D+S + +D+ G L+M+ ++ Sbjct: 12 STLALTGDLDRETLLPFWQQRESLL-----AGKTTLDVSGLNRVDSAGLALLMHVYQQPS 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 G+I + G S ++ L +L + Sbjct: 67 SGGEITIVGASDRLKTLIALYNLNE 91 >gi|145297396|ref|YP_001140237.1| hypothetical protein ASA_0305 [Aeromonas salmonicida subsp. salmonicida A449] gi|142850168|gb|ABO88489.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 139 Score = 44.2 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V +F+G+ ++P+++ + + ++LS +T +D+ G L++ + + Sbjct: 46 GHQVMKFSGDLQAPQVNALWQRRADWWQED------QLELSGVTTLDSAGLALLVKWAKA 99 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + ++L + + P Sbjct: 100 VLVRGATPQLVGASTDFYTLANLYGVAGLFQSTP 133 >gi|83748210|ref|ZP_00945237.1| toluene tolerance protein TTG2E [Ralstonia solanacearum UW551] gi|207721836|ref|YP_002252274.1| hypothetical protein RSMK02116 [Ralstonia solanacearum MolK2] gi|207744514|ref|YP_002260906.1| hypothetical protein RSIPO_02724 [Ralstonia solanacearum IPO1609] gi|83725178|gb|EAP72329.1| toluene tolerance protein TTG2E [Ralstonia solanacearum UW551] gi|206587003|emb|CAQ17587.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] gi|206595920|emb|CAQ62847.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 104 Score = 44.2 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E I + ++++ Q+ + VD + ++++D+ +++ + Sbjct: 2 LTLSGPLTHREAPRILREGEAQLSQASQAGTVAVRVDCAGLSQVDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ E L +L + + P + ++ Sbjct: 62 AAGIALDIAAAPEALRNLATLYGVDALLAVAPATTASHHP 101 >gi|238793700|ref|ZP_04637322.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909] gi|238726941|gb|EEQ18473.1| Anti-sigma B factor antagonist [Yersinia intermedia ATCC 29909] Length = 106 Score = 44.2 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 5/56 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G + + + + +D+S + +D+ G L+++F E Sbjct: 13 TLVLQGELDRETLLPLWQQREALL-----AGKTRIDVSQLQRVDSSGLALLVHFRE 63 >gi|330872540|gb|EGH06689.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 96 Score = 44.2 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 3/84 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 9 DDTARIQIDGELTIYTVTELAARL---LPQIGSAARVEVDLSHVTEMDGAGLQLLAVIQR 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 66 EAEKTGTALHLTGQSKAVTETFEL 89 >gi|228962766|ref|ZP_04124032.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] gi|228796919|gb|EEM44263.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] Length = 106 Score = 43.8 bits (102), Expect = 0.039, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 F G + + + + + ++D+S +T +D+ G + M ++K Sbjct: 13 TYTFVLTGELDAHYAPVLKKQLDTILEQ--GHSHIVLDVSRVTYMDSTGLGVCMGLLKKV 70 Query: 66 HGK---IKLQGVSTHIEQLFSL 84 H + +++ GVS+ I++LF L Sbjct: 71 HKQDGFLEVTGVSSRIQRLFDL 92 >gi|317123693|ref|YP_004097805.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043] gi|315587781|gb|ADU47078.1| anti-sigma-factor antagonist [Intrasporangium calvum DSM 43043] Length = 127 Score = 43.8 bits (102), Expect = 0.040, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60 TV G + + + I IVDLS +T +D+ G ++ + Sbjct: 11 GDRTVVHLGGEIDVYTAPFVREKLDEQI--HAGRADLIVDLSEVTFLDSTGLGVLVGRLK 68 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 F G +KL G S + ++F++ Sbjct: 69 FARTRGGSLKLVGTSERVLRVFAI 92 >gi|325916555|ref|ZP_08178821.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas vesicatoria ATCC 35937] gi|325537228|gb|EGD08958.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas vesicatoria ATCC 35937] Length = 109 Score = 43.8 bits (102), Expect = 0.040, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 + ++ +F +I Sbjct: 69 ADGRPFSLTDSSRAVFDVIELL 90 >gi|296313908|ref|ZP_06863849.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC 43768] gi|296839442|gb|EFH23380.1| hypothetical protein NEIPOLOT_00771 [Neisseria polysaccharea ATCC 43768] Length = 100 Score = 43.8 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ D + ++ VD + D+ L++ + G Sbjct: 17 TLHIGGDITVKTLTR--DAFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 74 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 75 SVRLTGIPESVRALSELYE 93 >gi|59714203|ref|YP_206978.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio fischeri ES114] gi|59482451|gb|AAW88090.1| putative sulphate transporter, anti-sigma factor antagonist [Vibrio fischeri ES114] Length = 105 Score = 43.8 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S I V G+ + +I + I + + +DLS + +D+ G I+Y Sbjct: 8 SNEDILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++++ +L L+ + + Sbjct: 66 YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100 >gi|77361455|ref|YP_341030.1| anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis TAC125] gi|76876366|emb|CAI87588.1| putative anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis TAC125] Length = 97 Score = 43.8 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 6/87 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59 +S+ FR +G I D+ + + DLS ++ +DT G A LI Sbjct: 6 ISQVDEQHFRVSGELTRSSIG---DEKGLGSQAITKHKICYFDLSDVSRVDTAGLAWLIH 62 Query: 60 YFME--KYHGKIKLQGVSTHIEQLFSL 84 F + + +++LQ ++ L L Sbjct: 63 TFAQYKQQGIRLELQNPPEQLQNLMQL 89 >gi|125972642|ref|YP_001036552.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC 27405] gi|256004729|ref|ZP_05429705.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360] gi|281416834|ref|ZP_06247854.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20] gi|125712867|gb|ABN51359.1| anti-sigma-factor antagonist [Clostridium thermocellum ATCC 27405] gi|255991322|gb|EEU01428.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 2360] gi|281408236|gb|EFB38494.1| anti-sigma-factor antagonist [Clostridium thermocellum JW20] gi|316941120|gb|ADU75154.1| anti-sigma-factor antagonist [Clostridium thermocellum DSM 1313] Length = 111 Score = 43.8 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + V G I + + KS + ++D S +T +D+ G +IM Sbjct: 7 NRGNTLVAVLNGELDHHTAEYIRQKLDAEMMKSTT-KNMVLDFSKVTFMDSSGIGVIMGR 65 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84 + K +GK+ L G++ I+++F + Sbjct: 66 YKNIRKLNGKMSLAGINDKIKRIFEM 91 >gi|295838221|ref|ZP_06825154.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197696633|gb|EDY43566.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 124 Score = 43.8 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 +G V R AG + V A+ + S ++DLS + D+ G +++ Sbjct: 10 RDGWAVLRVAGEMDLVSSPSVRQRVHEAVAR--GRHSVVLDLSQVHFCDSSGVGVLIAAR 67 Query: 60 YFMEKYHGKIKLQ 72 M HG++++ Sbjct: 68 RLMRSCHGRLRIV 80 >gi|113461312|ref|YP_719381.1| hypothetical protein HS_1169 [Haemophilus somnus 129PT] gi|112823355|gb|ABI25444.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 110 Score = 43.8 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%) Query: 4 NGITVFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + R G + + + + + + +LS + ID+ G L+ F+ Sbjct: 14 SDKMTLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ Q + QL L Sbjct: 74 NELEKQVSSQKIHNAPIQLEILADL 98 >gi|330966331|gb|EGH66591.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. actinidiae str. M302091] Length = 96 Score = 43.8 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 3/84 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 9 DDTARIQIDGELTIYTVTELAARL---LPQIGSAARVEVDLSHVTEMDGAGLQLLAVIQR 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 66 EAEKTGTALHLTGQSKAVTETFEL 89 >gi|255592342|ref|XP_002535675.1| conserved hypothetical protein [Ricinus communis] gi|223522326|gb|EEF26708.1| conserved hypothetical protein [Ricinus communis] Length = 113 Score = 43.8 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78 I + + D +DLS I+++DT G +L++ + K V H Sbjct: 18 TIYNAPEQKTRLLTALSGCDELELDLSQISDMDTAGFQLLVLAKREAIRAGKALNVVEHS 77 Query: 79 EQLFSLISF 87 + + L+ Sbjct: 78 KAVTDLLDL 86 >gi|315927604|gb|EFV06935.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 114 Score = 43.8 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 G W I ++ +A+ IQS I D + IDT G + ++ Sbjct: 11 TLFIFGIWDKTSIYKLKIKDFLAL---IQSKEVIFDFKDLKAIDTAGVRFFLALENDLKN 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + KI +G+++ + LF L +++ K + Sbjct: 68 KNIKITKEGLNSRFQTLFELCEKNYQRLGKTKN 100 >gi|127511049|ref|YP_001092246.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4] gi|126636344|gb|ABO21987.1| hypothetical protein Shew_0115 [Shewanella loihica PV-4] Length = 99 Score = 43.8 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 3/80 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R A I ++ D+ + SD+ +D S +T +DT GA+L+ + Sbjct: 6 IRLASELTIRNIQQVHHDIAEQL---TASDTLCIDASQLTRVDTSGAQLLYFLHHYCQTH 62 Query: 69 IKLQGVSTHIEQLFSLISFT 88 + E++ ++ Sbjct: 63 HHAIEWTPPAEEVEHTLAEL 82 >gi|294138951|ref|YP_003554929.1| hypothetical protein SVI_0180 [Shewanella violacea DSS12] gi|293325420|dbj|BAJ00151.1| hypothetical protein [Shewanella violacea DSS12] Length = 104 Score = 43.8 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 3/78 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R I I + + + +D S ++ +DT GA+L+ F + Sbjct: 6 IRLDSELTIRNIQPIFTQLSALL---THDEELHIDASQLSRVDTAGAQLLYLFSRTCASR 62 Query: 69 IKLQGVSTHIEQLFSLIS 86 +L + + Sbjct: 63 SLKVDWLNCRPELKANLE 80 >gi|326781288|ref|ZP_08240553.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces cf. griseus XylebKG-1] gi|326661621|gb|EGE46467.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces cf. griseus XylebKG-1] Length = 136 Score = 43.8 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 26/85 (30%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G G+ + ++V + + + + +D+ G ++ Sbjct: 16 EGSIRIGLQGDLDYDSADHLLNEVTAYLAARPALTDLHLHCAELDTVDSTGLSALLMISR 75 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 + G + E+L L+ T Sbjct: 76 RTSGAGVRLHLDARPERLDRLLHLT 100 >gi|67463658|pdb|1T6R|A Chain A, Solution Structure Of Tm1442, A Putative Anti Sigma Factor Antagonist In Phosphorylated State Length = 110 Score = 43.8 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ + R G+ + SE+ + + I+ + + ++DLS+++ +D G ++ + Sbjct: 11 QDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSK-KKIVLDLSSVSYMDXAGLGTLVVIL 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + K +S+ E + ++ TH Sbjct: 70 KDAKINGKEFILSSLKESISRILKLTH 96 >gi|297199462|ref|ZP_06916859.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197712996|gb|EDY57030.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 233 Score = 43.8 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 11/131 (8%), Positives = 35/131 (26%), Gaps = 6/131 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 + G V G + + + D +D++ +T +DT G + + Sbjct: 33 DGGRAVLVARGELIHGCADALGRTLARLPEDT---DRVDLDMTGVTFMDTTGLQFLEVLD 89 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 + ++ G + ++ + + + +S ++ Sbjct: 90 TYGRRRRVRVTATGWAEQPRRVLEMAGLDPDDPLHGPGTRWEPVPSSMVLERTQQLDRLR 149 Query: 120 KFINDSCSQAH 130 + Sbjct: 150 TEVEQLRQAIA 160 >gi|332038538|gb|EGI74981.1| putative anti-sigma B factor antagonist [Pseudoalteromonas haloplanktis ANT/505] Length = 97 Score = 43.4 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIM 59 +S+ F +G I D+ ++ + DLS ++ +DT G A LI Sbjct: 6 ISQVDGQHFGVSGELTRNSIG---DEQLLNNKLLTKHKIIYFDLSGVSRVDTAGLAWLIH 62 Query: 60 YF--MEKYHGKIKLQGVSTHIEQLFSL 84 F +++ +++LQ + ++ L L Sbjct: 63 SFAELKQQGIRLELQNLPEQLQNLMQL 89 >gi|254380525|ref|ZP_04995891.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1] gi|194339436|gb|EDX20402.1| hypothetical protein SSAG_00193 [Streptomyces sp. Mg1] Length = 172 Score = 43.4 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 3/93 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T G S + ++ ++ ++DLSA+T +D+ G +++ + Sbjct: 83 RTALTLTGALDMDTCSRVT---ATTDTLTLDGNTLVLDLSAVTFMDSSGLNMLLTLRNRA 139 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + Q+ L+ T + + P Sbjct: 140 EAEQGTLELRGLPGQVLRLLDITGTRDLFILAP 172 >gi|88861153|ref|ZP_01135787.1| putative anti-sigma B factor antagonist [Pseudoalteromonas tunicata D2] gi|88816875|gb|EAR26696.1| putative anti-sigma B factor antagonist [Pseudoalteromonas tunicata D2] Length = 97 Score = 43.4 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYF--MEKY 65 F +G ++ I K + I DLSAI+ +DT G A LI +++ Sbjct: 14 FVLSGELSHETVAAIE---FSKKFKLNDVNRIIFDLSAISRVDTAGLAWLIHTLSELQQQ 70 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 + L+ V +++L L+ + Sbjct: 71 EIHLTLRNVPEQLQKLMQLVQVSQ 94 >gi|296268344|ref|YP_003650976.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] gi|296091131|gb|ADG87083.1| anti-sigma-factor antagonist [Thermobispora bispora DSM 43833] Length = 115 Score = 43.4 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G + E+ V+ AI VDL+A+ IDT G +++ + K Sbjct: 15 TVLSLRGELDLYAVDELRRPVLTAIAAH--GPWLAVDLTAVNFIDTTGLGMLVRLLNKLR 72 Query: 67 ---GKIKLQGVSTHIEQLFS 83 G + L G ++++ Sbjct: 73 EKNGDLALIGPRGQVKRILQ 92 >gi|188993826|ref|YP_001905836.1| hypothetical protein xccb100_4431 [Xanthomonas campestris pv. campestris str. B100] gi|167735586|emb|CAP53804.1| hypothetical protein xcc-b100_4431 [Xanthomonas campestris pv. campestris] Length = 97 Score = 43.4 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 34/89 (38%), Gaps = 7/89 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 +G ++++ + + + + +DLS + +D+ G ++ + Sbjct: 13 TLAVSGVLDRAAVTDLWPRALAQL-----AGARTLDLSGVQRLDSAGVAMLAELAARLRS 67 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 68 NGNGTVVGKASGLDELCAAYRLSPSLDFQ 96 >gi|54293820|ref|YP_126235.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens] gi|53753652|emb|CAH15110.1| hypothetical protein lpl0876 [Legionella pneumophila str. Lens] Length = 93 Score = 43.4 bits (101), Expect = 0.050, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 4/80 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKY 65 F+ G + + D + A+ + + +DLS +T D+ G LI+ ++ Sbjct: 6 FKPGGELTFKSVVSVRDKLYKALMEDTRER-FCLDLSDVTHCDSAGLALIIEARKLCKQN 64 Query: 66 HGKIKLQGVSTHIEQLFSLI 85 + + G+S + L Sbjct: 65 NKVFDVIGISPETQSLAEFC 84 >gi|21219202|ref|NP_624981.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|289773659|ref|ZP_06533037.1| anti-sigma factor antagonist [Streptomyces lividans TK24] gi|6434742|emb|CAB61189.1| putative anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|289703858|gb|EFD71287.1| anti-sigma factor antagonist [Streptomyces lividans TK24] Length = 183 Score = 43.4 bits (101), Expect = 0.052, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 33/95 (34%), Gaps = 3/95 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ + AG + D ++ ++ + +VD + +D+ G +++ Sbjct: 84 DGVCLVILAGEVDLDGSGHLRDVLLSSVESAPG---TVVDFGEVGFLDSSGINVLISAHR 140 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ + + ++ + P Sbjct: 141 AAESRGVFFRLAAPRDAVERVLRLVGVDALIPCYP 175 >gi|251791362|ref|YP_003006083.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591] gi|247539983|gb|ACT08604.1| anti-sigma-factor antagonist [Dickeya zeae Ech1591] Length = 97 Score = 43.4 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G + + + S ++D+ + +D+ G L+++F + Sbjct: 13 ILFLEGCLDRNSLLPLWQQRNALLAASR-----VLDVEQVERVDSAGLALLVHFYHQQEQ 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + ++ E+L +LI Sbjct: 68 QGTPMKITGASERLRTLIQL 87 >gi|152972115|ref|YP_001337261.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262042750|ref|ZP_06015904.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150956964|gb|ABR78994.1| hypothetical protein KPN_03601 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259039975|gb|EEW41092.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 96 Score = 43.4 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64 G + + + + +AI+DLS T +DT G L+++ + + Sbjct: 13 TLALHGELDQDLLVPLWEA-----RAQATAGTAIIDLSQTTRVDTAGLALLVHFMALIRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 + +L G S +++ L L + Sbjct: 68 QGREAQLVGKSENLQTLIGLYNL 90 >gi|238896698|ref|YP_002921443.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae NTUH-K2044] gi|238549025|dbj|BAH65376.1| hypothetical protein KP1_4913 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 96 Score = 43.4 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64 G + + + + +AI+DLS T +DT G L+++ + + Sbjct: 13 TLALHGELDQDLLVPLWEA-----RAQATAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 + +L G S +++ L L + Sbjct: 68 QGREAQLVGKSENLQTLIGLYNL 90 >gi|320010158|gb|ADW05008.1| Sulfate transporter/antisigma-factor antagonist STAS [Streptomyces flavogriseus ATCC 33331] Length = 131 Score = 43.4 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 35/110 (31%), Gaps = 10/110 (9%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V R G+ S I + + A + ++D SA+T D+ L++ Sbjct: 24 DGHWVVRAQGDLDSDTIDPLFIALWEA---APGHAVVVLDASAVTFADSSFLSLLIEVHR 80 Query: 64 KYHGKIKLQGV-------STHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + ++ G + ++++ + + Sbjct: 81 RTELRVAAPGTVLARLLRTAGLDRVIRSYPTLEAALGDPPRGSGAPPAPP 130 >gi|197337497|ref|YP_002158686.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11] gi|197314749|gb|ACH64198.1| anti-anti-sigma regulatory factor [Vibrio fischeri MJ11] Length = 105 Score = 43.4 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 36/95 (37%), Gaps = 5/95 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S I V G+ + +I + I + + +DLS + +D+ G I+Y Sbjct: 8 SNADILVLSVQGDMDAIGCRDIQPSIDSVIEQ--EHHQVQIDLSHVAFLDSSGIGAIVYL 65 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++++ +L L+ + + Sbjct: 66 YKRLIEKDRTMQIKNAHGQPLELLKLLRIENAIPV 100 >gi|284045931|ref|YP_003396271.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283950152|gb|ADB52896.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 119 Score = 43.4 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 5/97 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G R G + + + D + A + Q +DL +T +D+ G I+ + Sbjct: 23 GGTYRMRLRGEFDLAAVETVEDALARAFDGDTQ--LLEIDLGQLTFLDSSGLRTILEARD 80 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + +++L ++++F++ ++ Sbjct: 81 RAASSGVRLRLVRGIEPVQRVFAITGLEASLPFADEP 117 >gi|78187225|ref|YP_375268.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum DSM 273] gi|78167127|gb|ABB24225.1| anti-anti-sigma regulatory factor, SpoIIAA [Chlorobium luteolum DSM 273] Length = 107 Score = 43.4 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 4/90 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NGI V G + + + S I++L + ID+ G L++ Sbjct: 9 NGIKVLSLEGVLNAASSP----KFKAYLETADHSGPMIINLEQVEFIDSSGLGLLVRLAR 64 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + + ++ +++ + T + Sbjct: 65 QKKSANEALKLAKMNDRVKRVFEITQAHSL 94 >gi|329997633|ref|ZP_08302890.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3] gi|328538943|gb|EGF64997.1| hypothetical protein HMPREF9538_00528 [Klebsiella sp. MS 92-3] Length = 95 Score = 43.4 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 8/83 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEK 64 G + + + + +AI+DLS T +DT G L+++ + + Sbjct: 13 TLALHGELDQDLLVPLWEA-----RAQATAGTAIIDLSQTTRVDTAGLALLVHFVALIRR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 + +L G S +++ L L + Sbjct: 68 QGREAQLVGKSENLQTLIGLYNL 90 >gi|298485494|ref|ZP_07003578.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160000|gb|EFI01037.1| STAS domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 96 Score = 43.4 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ T + G ++E+A + + K + VDLS +TE+D G +L+ Sbjct: 7 NQADATRVQIDGELTIYTVTELAARL---LPKITGAARVEVDLSQVTEMDGAGLQLLAVI 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFEL 89 >gi|271965897|ref|YP_003340093.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM 43021] gi|270509072|gb|ACZ87350.1| anti-anti-sigma regulatory factor [Streptosporangium roseum DSM 43021] Length = 109 Score = 43.4 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 28/98 (28%), Gaps = 2/98 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G G+ +E+ + + +DLS + +D+ G ++ Sbjct: 14 TAEGTVRLVLTGDLDYDTAAELFTLAQELFSADL--RLLELDLSGLDFVDSSGVAALINV 71 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + L L T ++ P Sbjct: 72 YNTARARNSAMRIIALTPYLRHLFKVTALDQVFELPPA 109 >gi|283850920|ref|ZP_06368205.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] gi|283573566|gb|EFC21541.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] Length = 115 Score = 43.4 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 4/108 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---I 58 + V +G + E+ ++ I + + + ++DLS + +D+ G L + Sbjct: 8 NTEEALVIGLSGEIIMDVVIELKAEIAPLIQNASR-KAVVLDLSGVAFLDSSGVGLFIGL 66 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 E + S I +LF ++ T + S Sbjct: 67 RRLCEDEGKAFSIANPSPPIRKLFDMLRLTDYFAVSATPVTSPGATPS 114 >gi|298292174|ref|YP_003694113.1| ABC transporter [Starkeya novella DSM 506] gi|296928685|gb|ADH89494.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 506 Score = 43.0 bits (100), Expect = 0.064, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 70/172 (40%), Gaps = 7/172 (4%) Query: 203 MSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWA 262 + +Q L+ ++++ R+ + I A++G+ ++ ++ A+R + + +R L+ A Sbjct: 331 IGFVQTTISVPLIASILVVARNSAVICADLGNRTLSAQLPAMRNLAIPGLRYLVVSIFVA 390 Query: 263 LIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS-----RFHSTATLANIFTGLI-- 315 +SL LLT+ A +A A ++ F+ R G + Sbjct: 391 NTLSLSLLTVAALATASWAALQTWQVFFPDQPMEFWQENYFRRLIEAGPALYAQLGWVGA 450 Query: 316 KAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 K + A+ G + S+ + +V +S+ ++ + FAI Sbjct: 451 KIALSSLLGSGAAILIGLRPKLSVVSINNAIAKAIVIGVSLTLLSHAFFAIL 502 >gi|308070733|ref|YP_003872338.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] gi|305860012|gb|ADM71800.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] Length = 112 Score = 43.0 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ +G ++ V+ + D I++L + ID+ G +++ Sbjct: 15 TTDGVNTVYLSGELDL-SVAPDFRLVMEPLVGESSQD-LIINLRDLKYIDSTGIGILLSI 72 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSL 84 ++ HG + +Q + I++LF + Sbjct: 73 LKARHGMESRFAVQEIPPQIQKLFDM 98 >gi|126347595|emb|CAJ89307.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 160 Score = 43.0 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 29/81 (35%), Gaps = 2/81 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ + AG+ + + + I + ++DLS + D+ G ++ Sbjct: 15 GLAIATVAGDVDTRTADTLRREASEIIQQGC--PRLVLDLSGVRFCDSAGLSALIGLWHA 72 Query: 65 YHGKIKLQGVSTHIEQLFSLI 85 ++ ++L ++ Sbjct: 73 AQAAGGALRLADVPDRLMRML 93 >gi|297157353|gb|ADI07065.1| putative anti-anti-sigma-factor [Streptomyces bingchenggensis BCW-1] Length = 130 Score = 43.0 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 5/89 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+TV G + I+ + ++ + ++DL +T +D G L+ Sbjct: 16 GGVTVAEITGELDIFAAARISPRLDSLAREAR--PNLVLDLRMVTFLDCAGVSLLCRLRN 73 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTH 89 + G+++L V +L ++ Sbjct: 74 RALERGGRLRLVIVDPRFTRLLRMVRLED 102 >gi|271961671|ref|YP_003335867.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM 43021] gi|270504846|gb|ACZ83124.1| anti-anti-sigma factor family protein [Streptosporangium roseum DSM 43021] Length = 123 Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 2/104 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +++ AG + D+ +I S I+DL +T D+ G ++ + + Sbjct: 16 ENVSLLALAGELDYTNAERLQHDLQESIG--PDSRDLIIDLKDLTFCDSTGIQVFLAVRK 73 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 HG+ ++ +L L T + +P + Sbjct: 74 LVHGRGHSVVLAQLHPRLERLFHLTGLTQAFGIQPTVGDAVEAL 117 >gi|320538925|ref|ZP_08038601.1| putative conserved hypothetical protein [Serratia symbiotica str. Tucson] gi|320031085|gb|EFW13088.1| putative conserved hypothetical protein [Serratia symbiotica str. Tucson] Length = 119 Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 31/80 (38%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + ++ +D +D++ + +D+ G L+++ H Sbjct: 13 TLILRGVLDRETLLPLWQQ-----RGALMADKTEIDVAQLQRVDSAGLALLVHLRAHQHQ 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + +S ++L +L++ Sbjct: 68 RGVELKISGATDRLRTLVAL 87 >gi|319651420|ref|ZP_08005549.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2] gi|317396951|gb|EFV77660.1| anti-sigma F factor antagonist [Bacillus sp. 2_A_57_CT2] Length = 116 Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 + R +G E+ + AI + I++L ++ +D+ G +I+ Sbjct: 12 DVLCIRLSGELDHHSADELREQATRAIEEH-DIHHIILNLEQLSFMDSSGLGVILGRYKQ 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 +++ HG++ + +S +++LF + Sbjct: 71 IKQKHGEMVVCAISPAVQRLFDM 93 >gi|289674998|ref|ZP_06495888.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae FF5] Length = 100 Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 T + G ++E+A + + + + VDLS +TE+D G +L+ + Sbjct: 14 DTTRVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVIQRE 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 ++ + + Sbjct: 71 AGKTGTSLHLTGQSKAVSETFEL 93 >gi|257440907|ref|ZP_05616662.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii A2-165] gi|257196687|gb|EEU94971.1| anti-sigma F factor antagonist [Faecalibacterium prausnitzii A2-165] Length = 104 Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 4/88 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + + + AG + + A+ + ++DL + +D+ G LI+ Sbjct: 8 AADDLLYAYLAGEIDHDAAQNLRIQLDDALLAR-TPKTLVLDLGGVGFMDSSGVGLILGR 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLIS 86 G +++Q + ++ L + Sbjct: 67 QRCARSLGGTLRIQHAPEQLRRVLRLAN 94 >gi|56415238|ref|YP_152313.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364168|ref|YP_002143805.1| anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129495|gb|AAV79001.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095645|emb|CAR61213.1| possible anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 98 Score = 43.0 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG ++ + D V A + +DLS I+ +DT G L+ + + + Sbjct: 13 TLMLAGELDQDVLAPLWDARVEA-----MTGVTRIDLSQISRVDTGGLALLAHLVNQAKK 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + +S +++++L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|300690222|ref|YP_003751217.1| hypothetical protein RPSI07_0541 [Ralstonia solanacearum PSI07] gi|299077282|emb|CBJ49908.1| conserved protein of unknown function, STAS domain [Ralstonia solanacearum PSI07] Length = 104 Score = 43.0 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 36/100 (36%), Gaps = 2/100 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E + + + ++ Q+ + VD + ++++D+ +++ + Sbjct: 2 LTLSGPLTHREAPRVLREGEAQLGQARQAGTAAVRVDCAGLSQVDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ E L +L + + P + ++ Sbjct: 62 VAGIALDIAAAPEALRNLAALYGVDTLLAIAPATTASHHP 101 >gi|238758305|ref|ZP_04619483.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236] gi|238703428|gb|EEP95967.1| Anti-sigma B factor antagonist [Yersinia aldovae ATCC 35236] Length = 100 Score = 43.0 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 8/90 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---K 64 G + + + + +D +D+S + +D+ G L+++F E + Sbjct: 13 TLILQGELDRETLLPLWQQREVLL-----ADKTHIDVSQLQRVDSSGLALLVHFRELRAR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 + + GVS + L L + H ++ Sbjct: 68 QGVSLTVIGVSDRLSTLIELYNLQHIIPVE 97 >gi|21243591|ref|NP_643173.1| hypothetical protein XAC2864 [Xanthomonas axonopodis pv. citri str. 306] gi|78048575|ref|YP_364750.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294625044|ref|ZP_06703693.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665333|ref|ZP_06730624.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325928059|ref|ZP_08189272.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas perforans 91-118] gi|21109162|gb|AAM37709.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gi|78037005|emb|CAJ24725.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292600674|gb|EFF44762.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604882|gb|EFF48242.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325541557|gb|EGD13086.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas perforans 91-118] Length = 109 Score = 43.0 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90 >gi|119896700|ref|YP_931913.1| STAS domain-containing protein [Azoarcus sp. BH72] gi|119669113|emb|CAL93026.1| putative STAS domain protein [Azoarcus sp. BH72] Length = 102 Score = 43.0 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 6/90 (6%) Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKIK 70 + +E +V A+ Q+D +DLSA+ EIDT G +L++ ++ + + Sbjct: 14 DMTIYHAAEQKQQLVAALA---QADELQIDLSAVAEIDTAGFQLLILVKREAQRLGKRAR 70 Query: 71 LQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + S + ++ + P Sbjct: 71 IVAHSAAVREVVDFFNMAAEFGDPMLMPAP 100 >gi|284034232|ref|YP_003384163.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836] gi|283813525|gb|ADB35364.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836] Length = 121 Score = 43.0 bits (100), Expect = 0.068, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G+ E+ D + + + I + ++DL+ + +D+ G +++ ++ Sbjct: 20 LVRLSGDVDIDSSDELTDALKAVLAE-IGARPLVLDLTEVEFMDSSGLGVLVGAHKEATA 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ ++ ++ T K+ P Sbjct: 79 QGGTLILAAPHPRVAKILRITKLHKVFTVSP 109 >gi|320330208|gb|EFW86193.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880449|gb|EGH14598.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 96 Score = 43.0 bits (100), Expect = 0.069, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ T + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 7 NQADATRVQIDGELTIYTVTELAARL---LPQITGAARVEVDLSQVTEMDGAGLQLLAVI 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 64 QREAGKTGTSLHMTGQSKAVTETFEL 89 >gi|261366788|ref|ZP_05979671.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM 15176] gi|282571619|gb|EFB77154.1| anti-sigma F factor antagonist [Subdoligranulum variabile DSM 15176] Length = 98 Score = 43.0 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 +G +G + ++ ++ + + +D S +T +D+ G LI+ Sbjct: 10 SGTLAAYLSGEIDHHAAQSLRREIDAQVDDRLP-ELLTLDFSGVTFMDSSGVGLILGRDR 68 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 + G++ +Q + ++ L Sbjct: 69 HIASLGGRLTVQNPPPAVRRMLDLAR 94 >gi|291614052|ref|YP_003524209.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1] gi|291584164|gb|ADE11822.1| anti-sigma-factor antagonist [Sideroxydans lithotrophicus ES-1] Length = 108 Score = 43.0 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G F G +E+ D + IN +D +DLS ++EID+ G +L++ Sbjct: 7 SSSGKAGFAIEGELTIYRAAELKDVIYPHIN---HADVIEIDLSRVSEIDSAGLQLLVSA 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + + K + H + + ++ Sbjct: 64 KLEAMIRDKQLHLVGHSKPVQEMLDL 89 >gi|239908932|ref|YP_002955674.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] gi|239798799|dbj|BAH77788.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] Length = 259 Score = 43.0 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 +G TV AG+ + + + V + +DLS + ID++G L++ Sbjct: 166 DGRTVLTPAGDIVASAADGLRNAVKDLLPGL--DGPFAMDLSKVELIDSVGIGLLIAVHN 223 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSLISF 87 + K G++ L VS + L + Sbjct: 224 SLSKKGGRLALDHVSPDLAALLRTMRL 250 >gi|332172343|gb|AEE21597.1| anti-sigma-factor antagonist [Glaciecola agarilytica 4H-3-7+YE-5] Length = 110 Score = 43.0 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 1/86 (1%) Query: 9 FRFAGNWKSPEISEIAD-DVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 F +G+ + + + +DL + IDT G IM + Sbjct: 21 FVLSGSLNRDTVPYFWRNSLQQLASAQSDDKPLTLDLHNVGHIDTAGLAWIMNLIRDTKQ 80 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKI 93 K ++ L +L + ++ Sbjct: 81 KNIQFKIANPPATLLNLAKISDVERF 106 >gi|256393986|ref|YP_003115550.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256360212|gb|ACU73709.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 118 Score = 43.0 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 30/85 (35%), Gaps = 3/85 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V AG+ + S + +D SA+T +D++G +++ ++ Sbjct: 12 GRVVVTLAGDVDLAAFRRFEAGLAQ---SWDGSTNLTIDCSAVTFLDSMGLRVLVRARQR 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ + ++ Sbjct: 69 AADHDRDVTLAAPSRPVLRVLQLAE 93 >gi|291615989|ref|YP_003518731.1| YrbB [Pantoea ananatis LMG 20103] gi|291151019|gb|ADD75603.1| YrbB [Pantoea ananatis LMG 20103] gi|327396241|dbj|BAK13663.1| anti-sigma factor antagonist YrbB [Pantoea ananatis AJ13355] Length = 98 Score = 43.0 bits (100), Expect = 0.074, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 R G + + + +N ++D+SA+ +D+ G L+++ E Sbjct: 11 ANTLRLEGELDRDTLLSLWEQREALVNAVE-----LIDVSALQRVDSSGLALLVHLREIT 65 Query: 64 -KYHGKIKLQGVSTHIEQLFSLISF 87 + G ++ G+ ++ L +L + Sbjct: 66 SQQGGSLRFVGIGDKLQSLITLYNL 90 >gi|271498873|ref|YP_003331898.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586] gi|270342428|gb|ACZ75193.1| anti-sigma-factor antagonist [Dickeya dadantii Ech586] Length = 97 Score = 43.0 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + + + S ++D+ + +D+ G L+++F + Sbjct: 13 TLYLEGCLDRNSLLPLWQQRDALL-----AGSRVLDVGQVERVDSAGLALLVHFYHQQEQ 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + ++ E+L +LI Sbjct: 68 QGTPMTITGASERLRTLIQL 87 >gi|148977762|ref|ZP_01814318.1| putative anti-sigma B factor antagonist [Vibrionales bacterium SWAT-3] gi|145962976|gb|EDK28246.1| putative anti-sigma B factor antagonist [Vibrionales bacterium SWAT-3] Length = 102 Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 3/91 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 + G+ + I + I S +DLS I +D+ G ++++ +E + Sbjct: 15 QLLGDIDRDTVPAIWRILEKW---QITESSVEIDLSHINRVDSAGMVMLIHLLEHAKNQN 71 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 +S EQL +L ++ + + + + Sbjct: 72 CHIMLSFVPEQLRTLFQLSNIQPMMAEHIKN 102 >gi|256376432|ref|YP_003100092.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255920735|gb|ACU36246.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 118 Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA-ELIMYFM 62 G V +G + + +++ A+ + + +VDL+ + + G EL+ + Sbjct: 16 GGAVVLHVSGEIDQLTVEPLHRELLSALARVRPPEPVVVDLTEVGFFGSAGLNELVTGHL 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + +L V+ H E L L +++ Sbjct: 76 QAELLGTRLSVVAGHREVLRPLAISGLDEQLDVHP 110 >gi|21232130|ref|NP_638047.1| hypothetical protein XCC2699 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767741|ref|YP_242503.1| hypothetical protein XC_1415 [Xanthomonas campestris pv. campestris str. 8004] gi|188990858|ref|YP_001902868.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv. campestris str. B100] gi|21113879|gb|AAM41971.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573073|gb|AAY48483.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167732618|emb|CAP50812.1| Putative anti-anti-sigma factor [Xanthomonas campestris pv. campestris] Length = 109 Score = 43.0 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPALA---HPGGVRLDLAAVSEIDTTGLQLLLATKQAVQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 + ++ + +I Sbjct: 69 ADGRPFVLTDSSRAVVDVIELL 90 >gi|325922307|ref|ZP_08184087.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas gardneri ATCC 19865] gi|325547212|gb|EGD18286.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Xanthomonas gardneri ATCC 19865] Length = 109 Score = 43.0 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL+A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLAAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90 >gi|118472389|ref|YP_890754.1| anti-sigma factor antagonist [Mycobacterium smegmatis str. MC2 155] gi|118173676|gb|ABK74572.1| anti-sigma factor antagonist [Mycobacterium smegmatis str. MC2 155] Length = 116 Score = 43.0 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 2 SENGI--TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +ENG AG +++ D V ++ + D +D + +T D+ G ++ Sbjct: 9 AENGSRSATVTVAGELDFMTTNKLVDYVSELLSTNQTLDDLRLDCADLTFCDSAGLSGLL 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLIS 86 + + L L+ Sbjct: 69 NIHRQTSPAGIQLHIDRRPPHLERLLD 95 >gi|59711006|ref|YP_203782.1| NTP-binding protein [Vibrio fischeri ES114] gi|197334778|ref|YP_002155155.1| YrbB protein [Vibrio fischeri MJ11] gi|59479107|gb|AAW84894.1| predicted NTP-binding protein [Vibrio fischeri ES114] gi|197316268|gb|ACH65715.1| YrbB protein [Vibrio fischeri MJ11] Length = 106 Score = 43.0 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F G + I + + VDL+ + ID+ G L+++ +E + Sbjct: 14 ISFKGALDRETVPNIWNKLTKW---QPNLSQVKVDLAHVNRIDSAGLVLLLHLIEHAKNQ 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93 + +QL +LI ++ + + Sbjct: 71 NCHIMFTFVPDQLITLIQLSNVESL 95 >gi|148273908|ref|YP_001223469.1| hypothetical protein CMM_2724 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831838|emb|CAN02808.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 112 Score = 43.0 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 2/86 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ +TV AG E+ + A+ + +VDL+ + ID+ G ++ + Sbjct: 11 EDDVTVVTAAGMLNMAAAPELRQAIHDALEPAPA--RIVVDLAGVDFIDSSGLGALIAGL 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 +S Q+ ++ + Sbjct: 69 RSARDAGGDLRISAPGPQVQMVLQLS 94 >gi|311893945|dbj|BAJ26353.1| putative antagonist protein [Kitasatospora setae KM-6054] Length = 111 Score = 43.0 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 3/94 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63 R G E+ V + VD +A++ D++G ++ Sbjct: 18 VTVRVEGELDHESCEELVRAVAAHLAAQPPYQVVRVDCAAMSLCDSMGLSALLQIRRDTD 77 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++ L+ H+++L L Sbjct: 78 AAGRRLLLEHRPAHLDRLLRLTGTAAYLLADRAP 111 >gi|283850846|ref|ZP_06368132.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] gi|283573769|gb|EFC21743.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] Length = 113 Score = 43.0 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ + R++G ++ + + + + I+DLS ++ +D+ G ++ Sbjct: 9 DSDALMLRYSGEITLEITGDLKRRLDAELE-DAEVKAVIIDLSDVSFMDSSGIGFLVSAN 67 Query: 63 EKYHGKIK 70 + + Sbjct: 68 TRMRSSGR 75 >gi|325204912|gb|ADZ00366.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] Length = 83 Score = 43.0 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 2/78 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+ ++ A + D+ VDLS + D+ L++ + G Sbjct: 1 MHIGGDITVKTLT--AAAFTRFRQQCRLKDTCAVDLSGVGRADSACVSLLLEVLRGCKGS 58 Query: 69 IKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 59 VRLTGIPESVRALSELYE 76 >gi|319776664|ref|YP_004139152.1| NTP binding protein, contains STAS domain [Haemophilus influenzae F3047] gi|329124182|ref|ZP_08252729.1| NTP binding protein (contains STAS domain) [Haemophilus aegyptius ATCC 11116] gi|317451255|emb|CBY87489.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae F3047] gi|327467607|gb|EGF13105.1| NTP binding protein (contains STAS domain) [Haemophilus aegyptius ATCC 11116] Length = 105 Score = 43.0 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62 N G + + + +++S + + +LS + ID+ G ++ F+ Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTVLCDFL 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + K + +QL +L Sbjct: 70 RECQKINKTVRLVYPPKQLLTLADLV 95 >gi|71734111|ref|YP_273088.1| STAS domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|289626912|ref|ZP_06459866.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|71554664|gb|AAZ33875.1| STAS domain protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|330867350|gb|EGH02059.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987695|gb|EGH85798.1| STAS domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331013008|gb|EGH93064.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 96 Score = 42.7 bits (99), Expect = 0.084, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ T + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 7 NQADATRVQIDGELTIYTVTELAARL---LPQITGAARVEVDLSQVTEMDGAGLQLLAVI 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 64 QREAGKTGTSLRMTGQSKAVTETFEL 89 >gi|24375437|ref|NP_719480.1| SpoIIAA family protein [Shewanella oneidensis MR-1] gi|24350281|gb|AAN56924.1|AE015826_9 SpoIIAA family protein [Shewanella oneidensis MR-1] Length = 94 Score = 42.7 bits (99), Expect = 0.084, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G ++ + +++ Q I+ LS + D+ G ++ + ++ Sbjct: 8 GNICHLKGRLSQDQVIALWPQRQSLLSQDTQ----ILSLSELEYSDSAGVAFLLALVRQH 63 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 ++L S +++L L Sbjct: 64 ATPLQLCSASAQLKKLIDLYDL 85 >gi|295838820|ref|ZP_06825753.1| STAS domain-containing protein [Streptomyces sp. SPB74] gi|197695366|gb|EDY42299.1| STAS domain-containing protein [Streptomyces sp. SPB74] Length = 112 Score = 42.7 bits (99), Expect = 0.085, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 1/95 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G+ ++ +DVV A+ + + +D + + D++G +++ Sbjct: 19 GRVVIALIGDLDYDTAEQLGEDVVTALA-TPGVRALALDCAGLEGCDSMGLAVLLQVRRH 77 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + L L+ T P Sbjct: 78 TDRAGVRLTLERPTDSLRRLLGLTGTSAHFRVGPA 112 >gi|117619997|ref|YP_858372.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561404|gb|ABK38352.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 139 Score = 42.7 bits (99), Expect = 0.085, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 6/94 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G R +G ++ ++ E+ + ++L +T +D+ G L++ + + Sbjct: 46 GTQEMRLSGELQAAQVVELWQRRADWWQED------QIELGDVTTLDSAGLALLVKWAKA 99 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + ++L + + P Sbjct: 100 ALARGATPQLVGASTDFYTLANLYGVAGLFQSTP 133 >gi|309378877|emb|CBX22464.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 92 Score = 42.7 bits (99), Expect = 0.085, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ ++ D+ + ++ VD + D+ L++ + + Sbjct: 9 ILHIGGDITVKTLT--EDEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKD 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 I L G+ + L L Sbjct: 67 SIGLTGIPESVRALSELYE 85 >gi|302189174|ref|ZP_07265847.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae 642] gi|330943041|gb|EGH45484.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. pisi str. 1704B] Length = 96 Score = 42.7 bits (99), Expect = 0.085, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + G ++E+A + + + + VDLS +TE+D G +L+ + Sbjct: 10 DTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVIQRE 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 ++ + + Sbjct: 67 AGKTGTSLHLTGQSKAVSETFEL 89 >gi|84387819|ref|ZP_00990834.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01] gi|86147569|ref|ZP_01065879.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222] gi|218710666|ref|YP_002418287.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32] gi|84377334|gb|EAP94202.1| Putative anti-sigma B factor antagonist [Vibrio splendidus 12B01] gi|85834608|gb|EAQ52756.1| Putative anti-sigma B factor antagonist [Vibrio sp. MED222] gi|218323685|emb|CAV20014.1| putative anti-sigma B factor antagonist [Vibrio splendidus LGP32] Length = 102 Score = 42.7 bits (99), Expect = 0.085, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 3/91 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 + G+ + I + S +DLS I +D+ G ++++ +E + Sbjct: 15 QLLGDIDRDSVPAIWRILEKW---QTTESSVEIDLSHINRVDSAGMVMLIHLLEHAKNQN 71 Query: 70 KLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 +S EQL +L ++ + + + + Sbjct: 72 CHIMLSFVPEQLRTLFQLSNIQPMMAEHIKN 102 >gi|257483989|ref|ZP_05638030.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289650982|ref|ZP_06482325.1| STAS domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330890723|gb|EGH23384.1| STAS domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 100 Score = 42.7 bits (99), Expect = 0.086, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ T + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 11 NQADATRVQIDGELTIYTVTELAARL---LPQITGAARVEVDLSQVTEMDGAGLQLLAVI 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 68 QREAGKTGTSLRMTGQSKAVTETFEL 93 >gi|253686690|ref|YP_003015880.1| hypothetical protein PC1_0285 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753268|gb|ACT11344.1| conserved hypothetical protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 98 Score = 42.7 bits (99), Expect = 0.086, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 7/84 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK--Y 65 G+ + + ++D+S + +D+ G L+M+ ++ Sbjct: 15 TLALTGDLDRETLLPFWQQRESLLM-----GKTVLDVSGLNRVDSAGLALLMHVYQQPSS 69 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 +I + G S ++ L +L + Sbjct: 70 GREITIVGASDRLKTLIALYNLNE 93 >gi|330900452|gb|EGH31871.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. japonica str. M301072PT] gi|330977435|gb|EGH77382.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 100 Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + G ++E+A + + + + VDLS +TE+D G +L+ + Sbjct: 14 DTARVQIDGELTIYTVTELAARL---LPQIGAAARLEVDLSQVTEMDGAGLQLLAVIQRE 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 ++ + + Sbjct: 71 AGKTGTSLHLTGQSKAVSETFEL 93 >gi|256377805|ref|YP_003101465.1| PAS/PAC sensor protein [Actinosynnema mirum DSM 43827] gi|255922108|gb|ACU37619.1| putative PAS/PAC sensor protein [Actinosynnema mirum DSM 43827] Length = 1017 Score = 42.7 bits (99), Expect = 0.088, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + V G+ + + + ++ ++ +DLS + + + G L++ Sbjct: 913 RDAVQVLHLGGDLDLDGVRALREFLLGRVD-VADRRPVELDLSGLGYLSSSGVALLLEAA 971 Query: 63 E 63 E Sbjct: 972 E 972 >gi|86739156|ref|YP_479556.1| anti-sigma-factor antagonist domain-containing protein [Frankia sp. CcI3] gi|86566018|gb|ABD09827.1| anti-sigma-factor antagonist (STAS) domain protein [Frankia sp. CcI3] Length = 115 Score = 42.7 bits (99), Expect = 0.089, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 44/98 (44%), Gaps = 5/98 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ V AG+ + + + ++ A + IVDL ++ +D+ G +I++ Sbjct: 5 VTDRDAIVVHPAGDIDYSSLDPLREALLDA--RVAGVKEIIVDLEQVSFLDSQGLAVILF 62 Query: 61 FMEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 ++ G++ L+ ++ +L + + + + + Sbjct: 63 AHQRQRSAGGRLVLRNLNEDAYRLLHVTNLSAVIDVDH 100 >gi|120402490|ref|YP_952319.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] gi|119955308|gb|ABM12313.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] Length = 128 Score = 42.7 bits (99), Expect = 0.090, Method: Composition-based stats. Identities = 9/96 (9%), Positives = 33/96 (34%), Gaps = 5/96 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 + V R G+ + + + +A+ + +VD++ + + + G ++ Sbjct: 19 QGAALVLRVTGDLDAMTAPTLVTHLDIALADAP--PVVVVDMTDVEFLSSAGISVLVETH 76 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 E+ +++ + F ++ + Sbjct: 77 RLAERADISLRVVADGPATSRPFRMMRLDEVIDLYP 112 >gi|121998895|ref|YP_001003682.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1] gi|121590300|gb|ABM62880.1| anti-sigma-factor antagonist [Halorhodospira halophila SL1] Length = 104 Score = 42.7 bits (99), Expect = 0.090, Method: Composition-based stats. Identities = 9/79 (11%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 R G + + + + + +DL+ + D+ G L++ + + Sbjct: 15 RVTGRLELDTVGALWPQGTALF--TAEGGVCEIDLAGVERTDSAGVALLIDWTRQARAHG 72 Query: 70 KLQGVSTHIEQLFSLISFT 88 + +QL +++ + Sbjct: 73 GRLCLCHVPQQLLAIVHAS 91 >gi|319788305|ref|YP_004147780.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1] gi|317466817|gb|ADV28549.1| anti-anti-sigma factor [Pseudoxanthomonas suwonensis 11-1] Length = 133 Score = 42.7 bits (99), Expect = 0.091, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 41/112 (36%), Gaps = 4/112 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +NG+ +G + SE+ + + + S ++DL + I + G + Sbjct: 12 QNGVQRIAVSGRLDTGSHSELDHAIDPLLADE-RVSSVVLDLEGLNYISSAGLRSLSRVR 70 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLH 111 + H + L I+++F ++ K + + + ++ + Sbjct: 71 RALARRHRSVLLINPQPQIQKVFDVVDAVPLKDVFASVEEADQYLDAMQRKL 122 >gi|291449295|ref|ZP_06588685.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291352242|gb|EFE79146.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length = 141 Score = 42.7 bits (99), Expect = 0.092, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V +G+ ++ + + A + S +VDLS + D+ +++ Sbjct: 39 EREALVLSVSGDLDIDSVTPLGLALSSAADD--GSGPVVVDLSGVGFADSTTVNVLLQGH 96 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +++L S +++L +I + Sbjct: 97 TALGDRLRLAAPSPFMQRLIGMIGLDSALPV 127 >gi|294497068|ref|YP_003560768.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551] gi|295702433|ref|YP_003595508.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319] gi|294347005|gb|ADE67334.1| anti-sigma B factor antagonist [Bacillus megaterium QM B1551] gi|294800092|gb|ADF37158.1| anti-sigma B factor antagonist [Bacillus megaterium DSM 319] Length = 110 Score = 42.7 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + AG + ++ + + IVDL+ ++ +D+ G + + + Sbjct: 10 DGQAYRIKLAGEIDAYTAPKLKEKFMEITEH--TEPEIIVDLTDVSYMDSTGLGVFIALL 67 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 +K +G +K GVS I++LF + T Sbjct: 68 KANKKNNGSLKFVGVSERIKRLFDITGLTD 97 >gi|46579860|ref|YP_010668.1| anti-anti-sigma factor [Desulfovibrio vulgaris str. Hildenborough] gi|120602674|ref|YP_967074.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4] gi|46449276|gb|AAS95927.1| anti-anti-sigma factor, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562903|gb|ABM28647.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris DP4] gi|311234139|gb|ADP86993.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris RCH1] Length = 114 Score = 42.7 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + V +G + ++ A++ +D +DL+ +T +D+ G ++ Sbjct: 10 GNVIVAVLSGELTLANAQHLRGELEEALSTQGVTD-VALDLAGVTYLDSSGLGSLIAVST 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89 + + +++ L+ Sbjct: 69 RARASGCRILLYRPSKEVHKLLDAAQ 94 >gi|297564180|ref|YP_003683153.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848629|gb|ADH70647.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 118 Score = 42.7 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ + V G ++ D+++ A+ + +VD+S + D+ G +++ Sbjct: 9 SQQDVAVVTVGGEIDLYTAPQLRDELIGALED--GARRLVVDMSRVEFCDSTGISVLLSA 66 Query: 62 MEKYHGK 68 M++ K Sbjct: 67 MKRSRDK 73 >gi|117929040|ref|YP_873591.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B] gi|117649503|gb|ABK53605.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B] Length = 135 Score = 42.7 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 8/105 (7%), Positives = 31/105 (29%), Gaps = 2/105 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + V G + + + +VDL+ + ID+ ++++ Sbjct: 17 DGDRVVVTLYGELDIANARRLRESFAAL--DDGRESDVVVDLAGVPFIDSTCLAVLLWAS 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 + + + + + ++ + + P+ + Sbjct: 75 HRSRDSGRRMVLRDPSRGVIAALAASGLLRAFRYDPETLDSVQPW 119 >gi|157148762|ref|YP_001456081.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895] gi|157085967|gb|ABV15645.1| hypothetical protein CKO_04594 [Citrobacter koseri ATCC BAA-895] Length = 97 Score = 42.7 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG ++ + D V A+ D +DLS ++ +D+ G L+++ +++ Sbjct: 13 TLALAGELDQDVLNPLWDARVDAMK-----DVTCIDLSQVSRVDSGGLALLVHLVDQAKR 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + + E++++L Sbjct: 68 QGNSVSLQGVNEKVYTLAKL 87 >gi|289664636|ref|ZP_06486217.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667200|ref|ZP_06488275.1| putative anti-anti-sigma factor [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 109 Score = 42.7 bits (99), Expect = 0.098, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90 >gi|58581094|ref|YP_200110.1| hypothetical protein XOO1471 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623029|ref|YP_450401.1| hypothetical protein XOO_1372 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166711349|ref|ZP_02242556.1| hypothetical protein Xoryp_07750 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575613|ref|YP_001912542.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425688|gb|AAW74725.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366969|dbj|BAE68127.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520065|gb|ACD58010.1| stas domain, putative [Xanthomonas oryzae pv. oryzae PXO99A] Length = 109 Score = 42.7 bits (99), Expect = 0.098, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 G +E+ + A+ + +DL A++EIDT G +L++ + Sbjct: 12 LTLALEGEMTIRRAAELKPLLQPAL---LHPGGLHLDLGAVSEIDTTGLQLLLATKQAIQ 68 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 + ++ + +I Sbjct: 69 ADGRPFSLTDSSRAVVDVIELL 90 >gi|309388695|gb|ADO76575.1| anti-sigma-factor antagonist [Halanaerobium praevalens DSM 2228] Length = 115 Score = 42.7 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E V +F G +++ + V + + + D I+DL+ ++ +D+ G L++ Sbjct: 11 EANKAVIKFEGEVNFENSNQLKEKVKAELITNEEVDVLIIDLAQVSYLDSSGVGLLLSLF 70 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84 M+K G +K+ + ++++F + Sbjct: 71 KFMQKRDGSLKVVNPNAKLKRVFDV 95 >gi|315185595|gb|EFU19364.1| anti-sigma-factor antagonist [Spirochaeta thermophila DSM 6578] Length = 130 Score = 42.7 bits (99), Expect = 0.100, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 5/110 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + G + I D + + ++DL +T ID+ G ++Y ++ Sbjct: 13 ILSLTGELDLYQAPRIKDMLQKVFPEHPA--KIVLDLDGLTYIDSSGIGALLYAYSEAKR 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 L + ++++ L H I + S + + Sbjct: 71 RDIAFYLVNLHGSVKRVIELTKLLHYFPIAPSLEEALHEEESSADPSEEM 120 >gi|311894138|dbj|BAJ26546.1| putative antagonist protein [Kitasatospora setae KM-6054] Length = 123 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 2/90 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G + + D + A+ +VD + D+ G L++ Sbjct: 2 VRPEGELDHDSVGPLRDVLERAVADPP--GRLVVDCGGLDFCDSTGLNLLLRAHGAARRA 59 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 ++ L ++ T ++ + P Sbjct: 60 GVPLLLAAPGPVLGRILEITGADEVLDVHP 89 >gi|307330897|ref|ZP_07610030.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] gi|306883438|gb|EFN14491.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] Length = 150 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 5/89 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+TV AG I + I ++DL +T +D G L+ Sbjct: 36 GGVTVAEIAGELDIFAAGRIVARLDSLIQARC--PDLVLDLRPVTFLDCAGLSLLCRLRN 93 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTH 89 + G+++L +L ++ Sbjct: 94 RVLERDGRLRLVIDEPRFVRLLRMVRLDD 122 >gi|283788170|ref|YP_003368035.1| putative anti-sigma factor antagonist [Citrobacter rodentium ICC168] gi|282951624|emb|CBG91324.1| putative anti-sigma factor antagonist [Citrobacter rodentium ICC168] Length = 98 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG ++ + D V A+ + +DLS I+ +DT G L+++ +E Sbjct: 13 TLMLAGELDQDVLNPLWDARVEAMKEVT-----CIDLSQISRVDTGGLALLVHLIELAKK 67 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + +++++L + +P Sbjct: 68 QGNSVSLQGVNDKVYTLAQLYNLPADVLPRP 98 >gi|323499084|ref|ZP_08104064.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM 21326] gi|323315919|gb|EGA68950.1| putative anti-sigma F factor antagonist [Vibrio sinaloensis DSM 21326] Length = 106 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 4/95 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 I GN + + I + +D S + +D+ G I+Y ++ Sbjct: 12 ILTLVINGNLDADGSRNAQPHIDEIIADKSE-REIEIDFSHVQFLDSSGVGAIVYLYKRL 70 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++++ VS ++ +L+ + +QK Sbjct: 71 IERQRSMRIENVSGQPLEIMNLLRIDQAIPVNSQK 105 >gi|309782896|ref|ZP_07677616.1| sulfate transporter/antisigma-factor antagonist STAS [Ralstonia sp. 5_7_47FAA] gi|308918320|gb|EFP63997.1| sulfate transporter/antisigma-factor antagonist STAS [Ralstonia sp. 5_7_47FAA] Length = 103 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 6/81 (7%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E + + + ++ ++ + +D + ++++D+ +++ + Sbjct: 2 LTLSGPLTHREAPRVLREGEAQLGQAREAGNAALHIDCAGLSQVDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 ++ + L +L + Sbjct: 62 DAGITLDIAGAPQALSNLATL 82 >gi|241664470|ref|YP_002982830.1| signal peptide protein [Ralstonia pickettii 12D] gi|240866497|gb|ACS64158.1| putative signal peptide protein [Ralstonia pickettii 12D] Length = 103 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 6/81 (7%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E + + + ++ ++ + +D + ++++D+ +++ + Sbjct: 2 LTLSGPLTHREAPRVLREGEAQLGQAREAGNAALHIDCAGLSQVDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 ++ + L +L + Sbjct: 62 DAGITLDIAGAPQALSNLATL 82 >gi|145627952|ref|ZP_01783753.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 22.1-21] gi|144979727|gb|EDJ89386.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 22.1-21] Length = 108 Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62 N G + + + +++S + + +LS + ID+ G + F+ Sbjct: 13 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTALCDFL 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + K + +QL +L Sbjct: 73 RECQKINKTVRLVYPPKQLLTLADLV 98 >gi|330468640|ref|YP_004406383.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032] gi|328811611|gb|AEB45783.1| anti-anti-sigma factor [Verrucosispora maris AB-18-032] Length = 117 Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 5/105 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 G R AG E+ + + ++DL+ +T D+ G + + Sbjct: 13 GGPARLRLAGELDMSSAPELNEAIDRLAAA--GQRRLLIDLAELTFCDSTGIAVFVRGDN 70 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + G +++ G + +E++ + + P Sbjct: 71 RAAEQGGWLRITGATGRVERVLKVTGLADVLGYGSADPGPDDRVG 115 >gi|227358276|ref|ZP_03842617.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906] gi|227161612|gb|EEI46649.1| anti-sigma factor antagonist [Proteus mirabilis ATCC 29906] Length = 102 Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + F G + + + +D I+D+S + ID+ G L ++ ME Sbjct: 18 ILSFQGTLDRETLLPVWQQRKALL-----ADINIIDISQLDHIDSTGLALFVHLKAEMEA 72 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + +QGVS + L +L Sbjct: 73 LERQCVIQGVSERFQTLITLYDLDE 97 >gi|170724538|ref|YP_001758564.1| hypothetical protein Swoo_0168 [Shewanella woodyi ATCC 51908] gi|169809885|gb|ACA84469.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908] Length = 98 Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 24/70 (34%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHI 78 I I Q++ +D S ++ +DT GA+L+ F + + Sbjct: 13 TIRNIQPVFTQLCELFTQAEILHIDASQLSRVDTAGAQLLHLFSKTCDARSLKVDWLGCQ 72 Query: 79 EQLFSLISFT 88 + L + Sbjct: 73 DDLLESLGEL 82 >gi|307324605|ref|ZP_07603812.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] gi|306889849|gb|EFN20828.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] Length = 161 Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 2/100 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V G ++ + A+ S + VDLS + D G ++ Sbjct: 51 EGPRKVVVVWGEVDYETAPALSAVLHEALRASAEG--VDVDLSGVAFWDCSGLNALLRLR 108 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 + K V + + +++ T + Sbjct: 109 REALAHGKTVTVRSPSRMVRRVLTLTGTSPLFLPPRPCRR 148 >gi|304413075|ref|ZP_07394548.1| cytoplasmic protein with a STAS domain [Candidatus Regiella insecticola LSR1] gi|304283918|gb|EFL92311.1| cytoplasmic protein with a STAS domain [Candidatus Regiella insecticola LSR1] Length = 98 Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM----EK 64 G+ + + + +D +D++ + +D+ G L+++ + ++ Sbjct: 14 LLLQGDLDRDTLLPLWQQRNKLL-----TDIDCIDVTQLHRVDSAGLALLVHLIHFKSQQ 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHR 90 + K+ + G+S + L L + R Sbjct: 69 QNIKLAISGISDQLATLIKLYNLPGR 94 >gi|68249640|ref|YP_248752.1| NTP binding protein, contains STAS domain [Haemophilus influenzae 86-028NP] gi|145630174|ref|ZP_01785956.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae R3021] gi|145636465|ref|ZP_01792133.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittHH] gi|145638103|ref|ZP_01793713.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittII] gi|145640768|ref|ZP_01796351.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae R3021] gi|148826303|ref|YP_001291056.1| NTP binding protein, contains STAS domain [Haemophilus influenzae PittEE] gi|148828245|ref|YP_001292998.1| NTP binding protein, contains STAS domain [Haemophilus influenzae PittGG] gi|260581864|ref|ZP_05849660.1| NTP binding protein [Haemophilus influenzae NT127] gi|319897437|ref|YP_004135634.1| ntp binding protein, contains stas domain [Haemophilus influenzae F3031] gi|68057839|gb|AAX88092.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 86-028NP] gi|144984455|gb|EDJ91878.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae R3021] gi|145270290|gb|EDK10225.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittHH] gi|145272432|gb|EDK12339.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittII] gi|145274694|gb|EDK14557.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 22.4-21] gi|148716463|gb|ABQ98673.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittEE] gi|148719487|gb|ABR00615.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittGG] gi|260095057|gb|EEW78949.1| NTP binding protein [Haemophilus influenzae NT127] gi|301169824|emb|CBW29428.1| predicted protein [Haemophilus influenzae 10810] gi|309751269|gb|ADO81253.1| Phospholipid ABC transporter, predicted auxiliary component [Haemophilus influenzae R2866] gi|309973446|gb|ADO96647.1| Phospholipid ABC transporter, predicted auxiliary component [Haemophilus influenzae R2846] gi|317432943|emb|CBY81310.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae F3031] Length = 105 Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62 N G + + + +++S + + +LS + ID+ G + F+ Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTALCDFL 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + K + +QL +L Sbjct: 70 RECQKINKTVRLVYPPKQLLTLADLV 95 >gi|241759036|ref|ZP_04757148.1| conserved hypothetical protein [Neisseria flavescens SK114] gi|241320857|gb|EER57090.1| conserved hypothetical protein [Neisseria flavescens SK114] Length = 92 Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++ +D S + + D+ L++ + + Sbjct: 9 TLYISGDVTVKTLT--ASAFARYEQQCRLKETDRIDFSQVGKADSACVSLLLNALRRTDK 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 67 KPTIQNIPDSVRALAELYE 85 >gi|282865602|ref|ZP_06274653.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|282559646|gb|EFB65197.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] Length = 128 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG-AELIMYFME 63 G R G+ E+A + + +D + + D++G A L++ Sbjct: 18 GTARLRLTGDLDYDTSGELARAAEECLAADPRLADLHLDCAQLRLCDSMGVATLLLIHRG 77 Query: 64 KYHGKIKLQGVST 76 ++L S Sbjct: 78 TTARGVRLHVESP 90 >gi|17547676|ref|NP_521078.1| putative signal peptide protein [Ralstonia solanacearum GMI1000] gi|17429980|emb|CAD16664.1| hypothetical signal peptide protein [Ralstonia solanacearum GMI1000] Length = 115 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 9/99 (9%), Positives = 35/99 (35%), Gaps = 2/99 (2%) Query: 10 RFAGNWKSPEISEIADDVVMAI--NKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G E + + + + + + + VD + ++++D+ +++ + Sbjct: 14 TLSGPLTHREAPRVLREGEAQLGQARQVGTAAVRVDCAGLSQVDSSALAVLLSWQRTAQA 73 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ E L +L + + P + ++ Sbjct: 74 AGIALDITAAPEALRNLATLYGVDTLLAVAPATTASHHP 112 >gi|255526138|ref|ZP_05393059.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7] gi|296187148|ref|ZP_06855545.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7] gi|255510187|gb|EET86506.1| anti-sigma-factor antagonist [Clostridium carboxidivorans P7] gi|296048183|gb|EFG87620.1| anti-sigma F factor antagonist [Clostridium carboxidivorans P7] Length = 111 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 S++G + +G E+ + + +++ I+D S + +D+ G +++ Sbjct: 7 SKDGKLIVHMSGELDHHSAEEVRNKIDDRLDRD-NIGKLIMDFSDVNFMDSSGIGVVI 63 >gi|145221622|ref|YP_001132300.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK] gi|315446641|ref|YP_004079520.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1] gi|145214108|gb|ABP43512.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK] gi|315264944|gb|ADU01686.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1] Length = 115 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 1/105 (0%) Query: 5 GITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G + R AG+ + D V + + +D S + D+ G ++ Sbjct: 11 GRSTSVRVAGDLDYGTTRLLVDTVSDLLTGGKVPEELHLDFSDLAFCDSAGLSGLVMIHR 70 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 + + QL +++ T P + + Sbjct: 71 RTSAAGVRLHLDDRPAQLERILTITGLLDFLTATPAEASDESVIG 115 >gi|21226007|ref|NP_631786.1| hypothetical protein SCO7750 [Streptomyces coelicolor A3(2)] gi|256782939|ref|ZP_05521370.1| hypothetical protein SlivT_00450 [Streptomyces lividans TK24] gi|289766821|ref|ZP_06526199.1| anti-sigma-factor antagonist [Streptomyces lividans TK24] gi|12311740|emb|CAC22758.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|289697020|gb|EFD64449.1| anti-sigma-factor antagonist [Streptomyces lividans TK24] Length = 137 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 7/105 (6%), Positives = 24/105 (22%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ + +V ++ + + + +D++G ++ + Sbjct: 18 DSLRIEVRGDLDYASADLLVAEVTAGLSGQPALTDLHLSCAGLGAVDSMGLSALLMIGRR 77 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + L L+ T + Sbjct: 78 TTAAGVRLHLDDRPANLNRLLELTGTLEHLTAPSPVGAEETPGTG 122 >gi|312881885|ref|ZP_07741652.1| putative anti-sigma B factor antagonist [Vibrio caribbenthicus ATCC BAA-2122] gi|309370464|gb|EFP97949.1| putative anti-sigma B factor antagonist [Vibrio caribbenthicus ATCC BAA-2122] Length = 100 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 AG+ + + DD+ + S + LS + +D+ G ++++ +E + Sbjct: 16 LAGDLTRDTVPGLWDDLQTLTFEQS---SLTISLSGVLRVDSSGMVMLIHLLEHAKKQNC 72 Query: 71 LQGVSTHIEQLFSLISFTHRKKI 93 +S +QL +L + + +++ Sbjct: 73 HIMLSFVPQQLMTLAALSSAEEL 95 >gi|229818799|ref|YP_002880325.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] gi|229564712|gb|ACQ78563.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] Length = 124 Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 3/100 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G V R W + + D ++D +T ID+ G I+ + Sbjct: 17 GGGVVIRI---WGEVDAALRDDASAAMAAVLADPGPVVIDARDVTFIDSTGLAFILQLHK 73 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103 + + + +L L+ + + Sbjct: 74 HGSEESREVVLRDPAPRLTELLELAAVGDLVRVERTPVPP 113 >gi|269125130|ref|YP_003298500.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268310088|gb|ACY96462.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 120 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 42/89 (47%), Gaps = 5/89 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 +NG+ + + +G + + ++ I+K +VDLS +T +D+ G +++ Sbjct: 10 DNGVNIVKVSGEIDVFSSPRLREMLLDVIDKGPL--RLVVDLSDVTFLDSTGLGVLVGIY 67 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + +G + G + + ++F + T Sbjct: 68 HRLRARNGSMSFVGANDRVRRVFHITQLT 96 >gi|330468643|ref|YP_004406386.1| sulfate transporter/antisigma-factor antagonist stas [Verrucosispora maris AB-18-032] gi|328811614|gb|AEB45786.1| sulfate transporter/antisigma-factor antagonist stas [Verrucosispora maris AB-18-032] Length = 118 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ + V R G+ S + ++ + + ++D + + ID+ G +I++ Sbjct: 6 SDPDMPVIRVGGDLAYTTASPLRSEIDRELQAGPA--TLVLDFANLQFIDSTGLSIIVHT 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + L +++ T Sbjct: 64 WREGLRDGVTLRLRAVPRFLETILDMT 90 >gi|302555986|ref|ZP_07308328.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM 40736] gi|302473604|gb|EFL36697.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM 40736] Length = 160 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 5/96 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G TV F G SEIA + ++ + ++DLS I D G L+ Sbjct: 51 ERGHTVLEFCGEIDLAAASEIAPHLDRETDR--PAARVVIDLSGIEFFDCSGLRLLYRAR 108 Query: 63 EK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 + G + L ++ + + + Sbjct: 109 SRVLDRDGHLLLVCAHPLTLRVLRITGLSRLLPPQP 144 >gi|258405515|ref|YP_003198257.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692] gi|257797742|gb|ACV68679.1| anti-sigma-factor antagonist [Desulfohalobium retbaense DSM 5692] Length = 114 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 NG+ ++G S++ + + A+ + ++DLS +D+ G ++ Sbjct: 9 RNGVCQVTYSGELTLEVTSQLKERIEQALENE-HCQALVMDLSETVFLDSSGIGFLVSLN 67 Query: 63 EKYHGK 68 +K + Sbjct: 68 KKMRQQ 73 >gi|152964453|ref|YP_001360237.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216] gi|151358970|gb|ABS01973.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216] Length = 122 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 30/84 (35%), Gaps = 2/84 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G TV +G + + + + +VD+ + +D+ G +++ + Sbjct: 10 EGGRTVVEVSGEIDVYTAPTLRERLNELVGA--GHHHLVVDMEGVEFLDSTGLGVLVGGL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86 ++ + E++ + Sbjct: 68 KRVRSHDGSLHLVCQREKILKVFR 91 >gi|290955149|ref|YP_003486331.1| anti-sigma-factor antagonist [Streptomyces scabiei 87.22] gi|260644675|emb|CBG67760.1| putative anti-sigma-factor antagonist [Streptomyces scabiei 87.22] Length = 122 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 36/95 (37%), Gaps = 1/95 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + I V G ++ ++ ++ ++ + +VDL +T +D+ G +++ Sbjct: 21 DDIRVVTMRGEID-HDVKDLFEEALLTGGVAAPPPRIVVDLGGVTFMDSSGINVLVAAHR 79 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + G+ ++ E + ++ P Sbjct: 80 RVSGERGWLRIAAAQESVLRVLQLVGVDTFIPCHP 114 >gi|29826775|ref|NP_821409.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29603871|dbj|BAC67944.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 162 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 5/85 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 +GI + G + + + I + + D +T +D+ G +++ Sbjct: 62 DGIRIVVLRGEIDHANRDSLHEAL--LIPEGEAEPRTVADFRGVTFMDSSGINVLITAHR 119 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85 + G ++L GV ++++ +L+ Sbjct: 120 AAQDAGGWLRLAGVQEPVQRVLALV 144 >gi|310643957|ref|YP_003948715.1| anti-sigma factor antagonist [Paenibacillus polymyxa SC2] gi|309248907|gb|ADO58474.1| Anti-sigma factor antagonist [Paenibacillus polymyxa SC2] Length = 112 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ +G ++ V+ + D IV+L + ID+ G +++ Sbjct: 15 TADGVNTVYLSGELDL-SVAPDFRLVMEPLVGESSQD-LIVNLRDLKYIDSTGIGILLSI 72 Query: 62 MEKYHG---KIKLQGVSTHIEQLFSL 84 ++ HG + +Q V I++LF + Sbjct: 73 LKARHGMESRFTVQEVPPQIQKLFDM 98 >gi|308069567|ref|YP_003871172.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] gi|310642624|ref|YP_003947382.1| anti-sigma f factor antagonist [Paenibacillus polymyxa SC2] gi|305858846|gb|ADM70634.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Paenibacillus polymyxa E681] gi|309247574|gb|ADO57141.1| Anti-sigma F factor antagonist [Paenibacillus polymyxa SC2] Length = 117 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 G+ + R +G + + AI + Q + ++ L + +D+ G +I+ Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 +++ GK+ + V+ + +L + Sbjct: 71 IKQKGGKMAVCDVNPPVHRLLDM 93 >gi|283852491|ref|ZP_06369759.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] gi|283572099|gb|EFC20091.1| anti-sigma-factor antagonist [Desulfovibrio sp. FW1012B] Length = 111 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 AG + + ++ + ++ + + +D++ ++ ID+ G L++ + Sbjct: 23 VTLAGEIDFSVTPAVRERLLALVGETPE--TITLDMADLSYIDSSGLALLIELRKHLAES 80 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 K+ ++ +S + +LF+L Sbjct: 81 GRKVAIRSLSPQVRKLFNLTQL 102 >gi|302538106|ref|ZP_07290448.1| anti-sigma factor antagonist [Streptomyces sp. C] gi|302447001|gb|EFL18817.1| anti-sigma factor antagonist [Streptomyces sp. C] Length = 121 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 +G + G + + + + A + +VD++ + D+ G +++ Sbjct: 18 DGAVLLTLGGELDHDTAAPLKEALDAAARR---GGRLLVDMAGLRFCDSTGLNALLHGRL 74 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 +++ G ++L G++ + ++F + Sbjct: 75 AVQEAGGSLELAGLTGPVARMFRI 98 >gi|83646437|ref|YP_434872.1| anti-anti-sigma regulatory factor [Hahella chejuensis KCTC 2396] gi|83634480|gb|ABC30447.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Hahella chejuensis KCTC 2396] Length = 88 Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 9/81 (11%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G +E ++ +DLS +TE+D G +L++ + Sbjct: 14 LTLNGELTIYCAAEAKAPLLEH-------KDIDIDLSQLTELDGAGLQLLILAKRDRGAR 66 Query: 69 IKLQGVSTHIEQLFSLISFTH 89 L S + ++FSL Sbjct: 67 --LVNASEAVNKVFSLTGLAD 85 >gi|271962372|ref|YP_003336568.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270505547|gb|ACZ83825.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 121 Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMA-INKSIQSDSAIVDLSAITEIDTIGAELIMY 60 S G V R G ++ A + + +S + ++DL+ +T D+ G +++ Sbjct: 15 SHGGAIVVRAVGELDYDYAPTFRRELTQAWTSGTGESPTLVLDLTGLTFCDSTGLAELLW 74 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85 + + ++ L ++ Sbjct: 75 MLRRSQESGTRLVLAGVSRTLRHML 99 >gi|222055351|ref|YP_002537713.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32] gi|221564640|gb|ACM20612.1| anti-sigma-factor antagonist [Geobacter sp. FRC-32] Length = 120 Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V + +G + E+ ++ A+ + +DL+ +TE+D G +L+ Sbjct: 17 ALVVKVSGPLTVQNVGELKTSLLQALE---GGEQLCLDLAGVTEVDLAGLQLLCSAHR 71 >gi|120600240|ref|YP_964814.1| SpoIIAA family protein [Shewanella sp. W3-18-1] gi|146291830|ref|YP_001182254.1| SpoIIAA family protein [Shewanella putrefaciens CN-32] gi|120560333|gb|ABM26260.1| SpoIIAA family protein [Shewanella sp. W3-18-1] gi|145563520|gb|ABP74455.1| SpoIIAA family protein [Shewanella putrefaciens CN-32] gi|319425065|gb|ADV53139.1| phospholipid transport-associated protein, MlaB [Shewanella putrefaciens 200] Length = 94 Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 4/81 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G ++ + ++ Q ++ LS + D+ G ++ + ++ Sbjct: 9 TVCHLKGRLSQTQVIALWSQRHSLLSPQTQ----VLSLSGLEYSDSAGVAFLLALVSEHK 64 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + L S +++L L Sbjct: 65 TPLALSSASQQLKKLIDLYDL 85 >gi|294634667|ref|ZP_06713200.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685] gi|291091913|gb|EFE24474.1| putative STAS domain protein [Edwardsiella tarda ATCC 23685] Length = 100 Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 T+ R G + E +D+S +T +D+ G L+++ Sbjct: 11 DGTILRLHGELVCDALGEFWRQRQALFQ-----GINCLDISGVTRVDSAGLALLLHVQNL 65 Query: 65 YHG-KIKLQGVSTHIEQLFSLISFTHRKKIKN 95 G + L+GVS + L +L + ++ Sbjct: 66 CPGTPLPLRGVSDRLHTLIALYNLHEIVLCES 97 >gi|159038342|ref|YP_001537595.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205] gi|157917177|gb|ABV98604.1| anti-sigma-factor antagonist [Salinispora arenicola CNS-205] Length = 178 Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 29/74 (39%), Gaps = 3/74 (4%) Query: 16 KSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVS 75 + + + + A +VDLSA+ +ID++G L++ ++ + + Sbjct: 86 SAAAVDPLRTALTEATE---HEGRVVVDLSAVEQIDSVGLGLLVRARQEARQRGAELCLH 142 Query: 76 THIEQLFSLISFTH 89 + +++ Sbjct: 143 APSRFVLTVLHTMR 156 >gi|182436852|ref|YP_001824571.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465368|dbj|BAG19888.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] Length = 151 Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + TV R +G + V A+ + ++DLS + D+ G +++ Sbjct: 37 QGSWTVLRMSGELDLVTSPVVRQSVHEAVAE--GQHDVVLDLSEVFFCDSSGVGVLIASR 94 Query: 60 YFMEKYHGKIKLQ 72 M+ G+++L Sbjct: 95 RLMKSCGGRLRLV 107 >gi|30019157|ref|NP_830788.1| anti-sigma B factor antagonist [Bacillus cereus ATCC 14579] gi|229126410|ref|ZP_04255425.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4] gi|29894700|gb|AAP07989.1| Anti-sigma B factor antagonist [Bacillus cereus ATCC 14579] gi|228656990|gb|EEL12813.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-Cer4] Length = 112 Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + +G + G + S++ + ++ S + +VD + +D+ G + + Sbjct: 9 LQNDGGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVQIVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|307243395|ref|ZP_07525552.1| STAS domain protein [Peptostreptococcus stomatis DSM 17678] gi|306493205|gb|EFM65201.1| STAS domain protein [Peptostreptococcus stomatis DSM 17678] Length = 105 Score = 41.9 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++ V G +++ +++ A+++ ++D++ + ID+ G +++ Sbjct: 11 NDSNEWVVALNGELDISCANKLKEELYKAVDEKFAD--VVIDMTNLEYIDSTGIGVLVGL 68 Query: 62 MEKYHGKIKLQGVS 75 M+K K +S Sbjct: 69 MKKLRTDGKDIKIS 82 >gi|319951120|ref|ZP_08024969.1| glutaminase [Dietzia cinnamea P4] gi|319435213|gb|EFV90484.1| glutaminase [Dietzia cinnamea P4] Length = 418 Score = 41.9 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 3/96 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G FR G ++ + +DLS ++ ++T +++ M Sbjct: 326 SGRRTFRLQGPMTFASAEQV---LRRLAEIPEGPGEVTLDLSRVSSVNTSARRMLLEAMR 382 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + G++ +L + + + + Sbjct: 383 RLSAEGHTVGLADPGRRLPEPDLGDGTRPVTRRAAR 418 >gi|221134180|ref|ZP_03560485.1| putative anti-sigma F factor antagonist [Glaciecola sp. HTCC2999] Length = 108 Score = 41.9 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 4/86 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G+ + + + V + +S +DL + ID+ G L+++ + Sbjct: 9 DNKLTIHLTGDLDAQGCETLRGEFV-TLAESPSFALVDIDLEHVDFIDSSGIGLVVFLFK 67 Query: 64 KYHGK---IKLQGVSTHIEQLFSLIS 86 K + + + + + +L L+ Sbjct: 68 KLRTQEVDLSIVNIHSQPLELIKLLR 93 >gi|257057452|ref|YP_003135284.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Saccharomonospora viridis DSM 43017] gi|256587324|gb|ACU98457.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Saccharomonospora viridis DSM 43017] Length = 105 Score = 41.9 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ R +G + + + +I+ + + +DLS ++ ID+ G ++ Sbjct: 10 AQGSTIEIRLSGEIDLSNSDAVREKIFASISNHLVA--VTLDLSEVSYIDSAGLRVLFAL 67 Query: 62 MEKYH 66 E+ Sbjct: 68 TERLR 72 >gi|78222299|ref|YP_384046.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15] gi|78193554|gb|ABB31321.1| hypothetical protein Gmet_1081 [Geobacter metallireducens GS-15] Length = 111 Score = 41.9 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 28/88 (31%), Gaps = 4/88 (4%) Query: 5 GITVFRFAGNWKSP----EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 G R G+W ++ + + + Q ++D++ + D G +L+ Sbjct: 7 GTLTIRLTGDWSMTGVTQQLLPLTEHLAALSGVHPQQVQPVIDMAEVALFDACGCQLLTI 66 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + ++ +L I Sbjct: 67 LLRHLRLLGFSPVLANIPAELRGSIELL 94 >gi|300718602|ref|YP_003743405.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661] gi|299064438|emb|CAX61558.1| Anti-sigma B factor antagonist [Erwinia billingiae Eb661] Length = 98 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 32/85 (37%), Gaps = 8/85 (9%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 +G + + + +++ +D+S + +D+ G L+++ + Sbjct: 11 ANQLHLSGELQRETLLALWKQ-----RETVMKQIDTIDVSELDRVDSAGLALLVHLRQIA 65 Query: 64 -KYHGKIKLQGVSTHIEQLFSLISF 87 + + G++ + L +L + Sbjct: 66 LQQGKAPQFTGINDKLHSLITLYNL 90 >gi|71906780|ref|YP_284367.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] gi|71846401|gb|AAZ45897.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] Length = 101 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + + E+ ++ A+ + + ++L+ ++E+DT G +L++ ++ Sbjct: 7 LVISDDLTIYHALELKPVLLNALAAT---NELELNLAQVSEMDTAGLQLLILLKKEAQKT 63 Query: 69 IKLQGVSTHIEQLFSLISF 87 K + H + + S+I F Sbjct: 64 GKCVRIVAHSQAVSSVIDF 82 >gi|311900243|dbj|BAJ32651.1| putative antagonist protein [Kitasatospora setae KM-6054] Length = 122 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V AG+ ++ + + + + + ++ IVDL + D+ G L++ Sbjct: 22 AAVCALAGDLDIETLAPAREALDLLVAELPRA--LIVDLGRVDFCDSSGLNLLLQTRMAA 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ + L+ T K + Sbjct: 80 ADGELPFHLAALSGPVRHLLELTGAKAV 107 >gi|127514228|ref|YP_001095425.1| anti-sigma-factor antagonist [Shewanella loihica PV-4] gi|126639523|gb|ABO25166.1| anti-sigma-factor antagonist [Shewanella loihica PV-4] Length = 97 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + +G + E+ + ++ + +DL+ ++ D+ G L+++ + + K Sbjct: 11 CQVSGELSQAAVVELWPKLETLLDGACD----RLDLAGVSYSDSAGVALLLHLVAEQQKK 66 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + QL LI + ++ + Sbjct: 67 GQSLVLCNPPAQLQKLIDLYDLQDFFTEEAK 97 >gi|294632658|ref|ZP_06711218.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292835991|gb|EFF94340.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 144 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 5/111 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V F G I + + + ++DLS + D G L+ + Sbjct: 37 GHIVLEFRGEIDIAAAERITPFLDRVTGR--REARVVIDLSGVDFFDCSGLRLLYRARAR 94 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIG 115 + +G + + + P R + + G Sbjct: 95 L---LDREGELRLVCTHPLTLRVLKVTGLARLLPPRPTLEAALERPQARSG 142 >gi|261405988|ref|YP_003242229.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10] gi|329929790|ref|ZP_08283466.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5] gi|261282451|gb|ACX64422.1| anti-sigma-factor antagonist [Paenibacillus sp. Y412MC10] gi|328935768|gb|EGG32229.1| anti-sigma F factor antagonist [Paenibacillus sp. HGF5] Length = 117 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + + R +G + + AI + Q++ ++ L + +D+ G +I+ F+ Sbjct: 13 VLIVRLSGELDHHTADHVRMQLDEAIQRR-QTEHLVLSLKDLDFMDSSGLGVILGRYKFI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ GK+ + V + +L + Sbjct: 72 KQKGGKMAVCDVKPQVYRLLDM 93 >gi|118465979|ref|YP_879574.1| hypothetical protein MAV_0285 [Mycobacterium avium 104] gi|118167266|gb|ABK68163.1| hypothetical protein MAV_0285 [Mycobacterium avium 104] Length = 274 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 8/111 (7%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G+W +P+ + + A +A L +IDT A L+ E Sbjct: 89 EAACLLMLNGDWTAPQYALLRAAYESA-------GAATW-LLQPGDIDTRLARLLWQHRE 140 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 + K G + + + R+ F+NL I Sbjct: 141 SWRYSTKAYGGTPLDHDREERQRWADDAAARLGIDLRAGRSGGFENLIEEI 191 >gi|213857282|ref|ZP_03384253.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 84 Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 AG ++ + D V A+N +DLS I+ +DT G L+ + + + + Sbjct: 2 LAGELDQDVLAPLWDARVEAMN-----GVTRIDLSQISRVDTGGLALLAHLVNQAKKQGN 56 Query: 71 LQGVSTHIEQLFSLISF 87 +S +++++L Sbjct: 57 AVSLSGVNDKVYALAQL 73 >gi|322834658|ref|YP_004214685.1| anti-sigma-factor antagonist [Rahnella sp. Y9602] gi|321169859|gb|ADW75558.1| anti-sigma-factor antagonist [Rahnella sp. Y9602] Length = 104 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G + D + + + S +D+S + +D+ G +++ E+ + Sbjct: 14 LMLHGELDRETLVAFWD-----MRRKLMSGVTCLDVSGLERVDSSGLAFLVHLREEARQQ 68 Query: 69 IKLQGVSTHIEQLFSLISF 87 ++ ++L +LI+ Sbjct: 69 GITLTIAGITDRLRTLITL 87 >gi|299065478|emb|CBJ36647.1| conserved protein of unknown function, STAS domain [Ralstonia solanacearum CMR15] Length = 104 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 36/100 (36%), Gaps = 2/100 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E + + + ++ Q+ + VD + ++++D+ +++ + Sbjct: 2 LTLSGPLTHCEAPRVLREGEAQLGQARQAGIAAVQVDCAGLSQVDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ E L +L + + P + ++ Sbjct: 62 AAGIALDIAAAPEALRNLATLYGVDTLLAVAPATTASHHP 101 >gi|295097678|emb|CBK86768.1| Predicted NTP binding protein (contains STAS domain) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 97 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 8/93 (8%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-- 62 G ++ + D + ++DL +T +DT G L+ + + Sbjct: 10 DGETLTLTGELDQDLLNPLWDA-----RHNAMQGVTLIDLHGVTRVDTAGIALLAHLVAT 64 Query: 63 -EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 +K + L GVS ++ L L + + Sbjct: 65 GKKQGSSVTLTGVSDNVITLAQLYNLPEDVLPR 97 >gi|114776921|ref|ZP_01451964.1| anti-sigma factor antagonist, putative [Mariprofundus ferrooxydans PV-1] gi|114553007|gb|EAU55438.1| anti-sigma factor antagonist, putative [Mariprofundus ferrooxydans PV-1] Length = 109 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 5/88 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 +N + R G+ + +++ + S++ +D + +D+ G + + Sbjct: 13 DNQAVLLRVKGDVTIHTSPRLREELKPLFSASMKEVHVALD--DVGFMDSSGIATLVEGL 70 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISF 87 + G L G+S ++ +F L Sbjct: 71 QWARMTGGHFVLSGLSENVRDVFELAKL 98 >gi|31789384|gb|AAP58501.1| putative anti-sigma factor antagonist [uncultured Acidobacteria bacterium] Length = 118 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 43/99 (43%), Gaps = 4/99 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 +G+T+ G E E+ D + ++ + + +++L + ID+ G I+ Sbjct: 14 DGVTILDLKGKMTLGEGDELLKDKINSLIQQDR-KKLLLNLEGVPYIDSAGLGEIVRTYT 72 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + GK+KL ++ I+ L ++ + +P Sbjct: 73 TVSRQGGKLKLLNLTKRIQDLLAITKLLTVFETYESEPD 111 >gi|89099053|ref|ZP_01171932.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus sp. NRRL B-14911] gi|89086183|gb|EAR65305.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus sp. NRRL B-14911] Length = 116 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 40/84 (47%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 N + R +G E+ + AI S +++L ++ +D+ G +I+ Sbjct: 11 NDVLCIRLSGELDHHSADELREKATNAIE-SYGIRHIVLNLEQLSFMDSSGLGVILGRYK 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 +++ HG++ + +S +++LF + Sbjct: 70 QIKQLHGEMVVCAISPAVQRLFDM 93 >gi|284992002|ref|YP_003410556.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] gi|284065247|gb|ADB76185.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] Length = 141 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 6/86 (6%), Positives = 24/86 (27%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G + + + +DL A T +++ G +++ Sbjct: 30 DGDVATLTLGGELTEGARRPLVRTMTDLMLGRPHLRRVRLDLRAATYLNSAGMAVLVQLQ 89 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + + + + + + Sbjct: 90 KLGQPRGVDVALVAPPVAVARPLQLS 115 >gi|77166235|ref|YP_344760.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|254435658|ref|ZP_05049165.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27] gi|76884549|gb|ABA59230.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|207088769|gb|EDZ66041.1| hypothetical protein NOC27_2721 [Nitrosococcus oceani AFC27] Length = 123 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FR G + E+A+ + N+ +DL ++ D+ G L++ ++ Sbjct: 12 HFRIVGELTFNTVPEVAEKGLALFNE--AGADLRIDLREVSRTDSAGLALLIAWLRYAKK 69 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 + K Q+ ++ + +I +++ Sbjct: 70 ENKSLQFLNIPAQMLAIAQISSLDQILPLGEEQALDQPPLA 110 >gi|296130799|ref|YP_003638049.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] gi|296022614|gb|ADG75850.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] Length = 139 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 3/82 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 T +G + E+ + A + + VD +T +D+ G + + Sbjct: 37 DRTRIVLSGEVDADLGPELQEATAEAEERGLP---IEVDAHHVTFMDSSGVAFLARLSIR 93 Query: 65 YHGKIKLQGVSTHIEQLFSLIS 86 +++L V + L + Sbjct: 94 SEHRVRLLRVPPTVRFLLEVTR 115 >gi|256379408|ref|YP_003103068.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255923711|gb|ACU39222.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 118 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 2/96 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G+ V +G + E+A + + + S +VDL + + + G E ++ Sbjct: 16 EDGVVVLHVSGELDTTSADELARPLKAHLG--GGARSVVVDLGGVRFLGSAGLESLVMGR 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + + + T + KP Sbjct: 74 KLAEEQGVELALVASSRSALRPLQATGLDSVFTIKP 109 >gi|297197210|ref|ZP_06914607.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] gi|197717540|gb|EDY61574.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] Length = 112 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 7/83 (8%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V +G ++E+ + + + ++D+S + D+ G ++ Sbjct: 14 GPVLELSGELDYANVAELHEVLDGRALR--AGRCLVLDMSGLEFCDSSGITALIAARSNA 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 ++ + ++ Sbjct: 72 QAVQADVALAAVPPNILRVLRIV 94 >gi|28899434|ref|NP_799039.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus RIMD 2210633] gi|153839281|ref|ZP_01991948.1| YrbB protein [Vibrio parahaemolyticus AQ3810] gi|260363397|ref|ZP_05776249.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus K5030] gi|260879332|ref|ZP_05891687.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus AN-5034] gi|260900282|ref|ZP_05908677.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus AQ4037] gi|28807670|dbj|BAC60923.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus RIMD 2210633] gi|149747182|gb|EDM58170.1| YrbB protein [Vibrio parahaemolyticus AQ3810] gi|308093101|gb|EFO42796.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus AN-5034] gi|308107580|gb|EFO45120.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus AQ4037] gi|308111162|gb|EFO48702.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus K5030] Length = 106 Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + L I +D+ G ++++ +E Sbjct: 14 TLTLTGALDRDSVPSLWAFAQQW---KPSQKELECSLEEIERVDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + + Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIKN 103 >gi|56459518|ref|YP_154799.1| STAS domain-containing protein [Idiomarina loihiensis L2TR] gi|56178528|gb|AAV81250.1| STAS domain [Idiomarina loihiensis L2TR] Length = 97 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 6/86 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S++ F+G+ ++++ VDL+ + IDT G ++ Sbjct: 7 VSDD--KTLVFSGSLTRHSVAKLWSQR----KSWSVGSETRVDLTDVEVIDTAGVAFLLE 60 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 ++ EQL + Sbjct: 61 ILKLVGDGKGPLTCIGASEQLKQIAR 86 >gi|261819646|ref|YP_003257752.1| hypothetical protein Pecwa_0292 [Pectobacterium wasabiae WPP163] gi|261603659|gb|ACX86145.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163] Length = 96 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK-- 64 + G+ + + ++ +D+S + +D+ G L+M+ ++ Sbjct: 12 STLALIGDLDRETLLPFWQQRESLL-----AEKTTLDVSGLNRVDSAGLALLMHVYQQPY 66 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 +I + G S ++ L +L + Sbjct: 67 SGDEITIVGASDRLKTLIALYNLNE 91 >gi|197287462|ref|YP_002153334.1| anti-sigma factor antagonist [Proteus mirabilis HI4320] gi|194684949|emb|CAR47142.1| putative anti-sigma factor antagonist [Proteus mirabilis HI4320] Length = 97 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + F G + + + +D I+D+S + ID+ G L ++ ME Sbjct: 13 ILSFQGTLDRETLLPVWQQRKALL-----ADINIIDISQLDHIDSTGLALFVHLKAEMEA 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + +QGVS + L +L Sbjct: 68 LERQCVIQGVSERFQTLITLYDLDE 92 >gi|319638898|ref|ZP_07993656.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102] gi|317399802|gb|EFV80465.1| hypothetical protein HMPREF0604_01280 [Neisseria mucosa C102] Length = 105 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++ +D S + + D+ L++ + + Sbjct: 22 TLYISGDVTVKTLT--ASAFARYEQQCRLKETDSIDFSQVGKADSACVSLLLNALRRTDK 79 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 80 KPTIQNIPDSVRALAELYE 98 >gi|284799476|ref|ZP_05984072.2| conserved hypothetical protein [Neisseria subflava NJ9703] gi|284797962|gb|EFC53309.1| conserved hypothetical protein [Neisseria subflava NJ9703] Length = 105 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++ +D S + + D+ L++ + + Sbjct: 22 TLYISGDVTVKTLT--ASAFARYEQQCRLKETDSIDFSQVGKADSACVSLLLNALRRTDK 79 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 80 KPTIQNIPDSVRALAELYE 98 >gi|225077103|ref|ZP_03720302.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens NRL30031/H210] gi|224951660|gb|EEG32869.1| hypothetical protein NEIFLAOT_02156 [Neisseria flavescens NRL30031/H210] Length = 105 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G+ ++ A + ++ +D S + + D+ L++ + + Sbjct: 22 TLYISGDVTVKTLT--ASAFARYEQQCRLKETDSIDFSQVGKADSACVSLLLNALRRTDK 79 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K +Q + + L L Sbjct: 80 KPTIQNIPDSVRALAELYE 98 >gi|157373876|ref|YP_001472476.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3] gi|157316250|gb|ABV35348.1| SpoIIAA family protein [Shewanella sediminis HAW-EB3] Length = 100 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+G+ V R +G E+ ++ + ++KS+Q ++DLSA++ D+ G ++ + Sbjct: 6 EDGV-VCRVSGRLSQVEVVKLWSERDTLMSKSVQ----VIDLSALSYSDSAGVAFLLELL 60 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 + + +S+ QL LI Sbjct: 61 SLAKSESRKLVLSSPSIQLLKLIGL 85 >gi|67921461|ref|ZP_00514979.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501] gi|67856573|gb|EAM51814.1| Anti-sigma factor antagonist [Crocosphaera watsonii WH 8501] Length = 116 Score = 41.5 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM- 59 +++ G+ VF +G + + +++ + + D VD+ + ID+ G I+ Sbjct: 5 LTDIGVAVFEPSGYLTAANVDSFQEELTNFVTHNPCRDFL-VDMHQVEFIDSAGLMAIVS 63 Query: 60 --YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 ++ + K+ + +S + +F L +I + Sbjct: 64 AFRLAQRLNKKLSVCCLSPSVRIIFELSQLDQALEIYEGRQAY 106 >gi|330465141|ref|YP_004402884.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032] gi|328808112|gb|AEB42284.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032] Length = 118 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 30/86 (34%), Gaps = 2/86 (2%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQ 72 G ++ D + ++K + DLS ++ D+ G + + + Sbjct: 20 GELDMATAPQLQDQITDLLDK--GRSRLVFDLSEVSFCDSTGLSVFVRAKNSCDEAGGVV 77 Query: 73 GVSTHIEQLFSLISFTHRKKIKNQKP 98 ++ + ++ + ++ + P Sbjct: 78 RLAAPQRGVLRILEVSGLVEVLHTYP 103 >gi|329911604|ref|ZP_08275574.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium IMCC9480] gi|327545838|gb|EGF30955.1| hypothetical protein IMCC9480_548 [Oxalobacteraceae bacterium IMCC9480] Length = 100 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G +++E + A+ SD ++DL+ +TE D G +L++ F + Sbjct: 6 ITISGELTIYQVAETRALLQRALTDHDGSDQLMLDLAGVTECDGAGVQLLLAFSQAVAAG 65 Query: 69 IKLQGVSTHIEQLFSLISF 87 + L L+ Sbjct: 66 GTDLVLCYVAPFLADLLRE 84 >gi|325002727|ref|ZP_08123839.1| anti-sigma-factor antagonist [Pseudonocardia sp. P1] Length = 119 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 1/82 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ AG+ + V + ++ VD S + D+ G ++ + Sbjct: 17 GVASVHVAGDLDYDSADALTSAVDDRL-RTADLRELRVDCSDLAYCDSYGLSSLLMVRRR 75 Query: 65 YHGKIKLQGVSTHIEQLFSLIS 86 + L L+ Sbjct: 76 TASAGVPMHLDNRGPGLERLLR 97 >gi|213586477|ref|ZP_03368303.1| hypothetical protein SentesTyph_36473 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 77 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 25/73 (34%) Query: 117 KIVKFINDSCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISF 176 + + G +F+ L+RQ+Y VGV + ++I+ Sbjct: 5 ALAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGV 64 Query: 177 VTGAVIAQQGAFQ 189 G V+ QG Sbjct: 65 FIGMVLGLQGYLV 77 >gi|300789253|ref|YP_003769544.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299798767|gb|ADJ49142.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 114 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 26/97 (26%), Gaps = 2/97 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G V G + V + K +VDL+ +T D+ G ++ Sbjct: 12 TAGGGAVVTVEGELDLATAPRLRAGVAALVLK--PGQVLVVDLAGVTFCDSSGISALIAA 69 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 G++ +L P Sbjct: 70 RNVAEAAGAAVGLAAVPARLSRTFGLIGLADFFPTYP 106 >gi|119357623|ref|YP_912267.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM 266] gi|119354972|gb|ABL65843.1| anti-sigma-factor antagonist [Chlorobium phaeobacteroides DSM 266] Length = 115 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 ITV G S + + + S+ D ++DL+ + +D+ G ++ K Sbjct: 11 ITVVALQG--TLDSSSSV--QLHNYTSPSVTEDPLVIDLTNLNFLDSSGLGALVEIARKK 66 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 K ++ E++ + T Sbjct: 67 REKGSDVKLACMNEKVRKVFEITQ 90 >gi|206578164|ref|YP_002236397.1| hypothetical protein KPK_0520 [Klebsiella pneumoniae 342] gi|288933381|ref|YP_003437440.1| hypothetical protein Kvar_0498 [Klebsiella variicola At-22] gi|290511568|ref|ZP_06550937.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55] gi|206567222|gb|ACI08998.1| conserved hypothetical protein [Klebsiella pneumoniae 342] gi|288888110|gb|ADC56428.1| conserved hypothetical protein [Klebsiella variicola At-22] gi|289776561|gb|EFD84560.1| hypothetical protein HMPREF0485_03339 [Klebsiella sp. 1_1_55] Length = 96 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + + A + I+DLS T +DT G L+++F+ Sbjct: 13 TLALHGELDQDLLVPLWEARARATE-----GATIIDLSQTTRVDTAGLALLVHFVALIRR 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + + + E L +LI Sbjct: 68 QGREAQLIAKSENLQTLIGL 87 >gi|302558423|ref|ZP_07310765.1| anti-sigma factor antagonist [Streptomyces griseoflavus Tu4000] gi|302476041|gb|EFL39134.1| anti-sigma factor antagonist [Streptomyces griseoflavus Tu4000] Length = 156 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 11/112 (9%), Positives = 30/112 (26%), Gaps = 4/112 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 G+ E+ V A+ +D + D+ G +++ Sbjct: 45 TLCLALVGDLDYEVGDEVLHQVRRALRAREDLRELRLDCRELVTTDSTGLSVLLQLHRDA 104 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 G+ H++ + ++ R + + + G+ Sbjct: 105 GR----DGIGFHLDNVGPVLERLLRVTGTYEHLRPGRPDELPADPEATAGES 152 >gi|156975888|ref|YP_001446795.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116] gi|156527482|gb|ABU72568.1| hypothetical protein VIBHAR_03654 [Vibrio harveyi ATCC BAA-1116] Length = 106 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + G + + + L I ID+ G ++++ +E Sbjct: 14 ILKLTGALDRDSVPALWAVAQQWLPSQT---ELECSLEEIERIDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + Q Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103 >gi|269957911|ref|YP_003327700.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] gi|269306592|gb|ACZ32142.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] Length = 128 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 3/81 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 +G + +E+++ M+ +D IT +D+ G + + Sbjct: 34 RARIVLSGEIDADIGAELSE---MSAEAEATGLPVEIDAHHITFMDSSGVAFLARLATRM 90 Query: 66 HGKIKLQGVSTHIEQLFSLIS 86 K+++ + L + Sbjct: 91 PQKVRILRAPPTVRFLLDVTR 111 >gi|254381467|ref|ZP_04996831.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1] gi|194340376|gb|EDX21342.1| hypothetical protein SSAG_01133 [Streptomyces sp. Mg1] Length = 110 Score = 41.5 bits (96), Expect = 0.20, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 3/99 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G V G + + +Q + +VDLSA+T +D+ +++ Sbjct: 11 QTGRFVVFVTGELDINTCPRVTETTDSL---PLQGQTLLVDLSAVTFMDSAALNMLLRLR 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + H + + +Q ++ + + + P + Sbjct: 68 HRAHAEGGTLKLCGASDQTLQVLDVSGTRSLFALSPGPA 106 >gi|295696442|ref|YP_003589680.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912] gi|295412044|gb|ADG06536.1| anti-sigma-factor antagonist [Bacillus tusciae DSM 2912] Length = 116 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 +G+ V R G + V + ++ + +LS ++ +D+ G +++ Sbjct: 10 RSGVVVARLRGELDHHTSDGVRAKVDALLEETGSIR-LLWNLSDLSFMDSSGLGVLLGRY 68 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + + GK+ G++ + +L L + + Sbjct: 69 RRISQRGGKMACCGLTAPVRKLLELSGVLRIVPVYEDE 106 >gi|160915292|ref|ZP_02077505.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991] gi|158433091|gb|EDP11380.1| hypothetical protein EUBDOL_01301 [Eubacterium dolichum DSM 3991] Length = 110 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++GI F F+G+ +S + + + I K Q +D A++ +D+ G ++ Sbjct: 11 QDGILYFYFSGDLDHLHVSRMKEQCIQLIEKY-QPKQVKMDFQAVSFVDSTGIGFVLARY 69 Query: 63 EKYH---GKIKLQGVSTHIEQLFSL 84 ++ K+ L +S E+LF + Sbjct: 70 KQLSKFQAKLTLCNLSRANERLFQM 94 >gi|149191258|ref|ZP_01869514.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1] gi|148834928|gb|EDL51909.1| anti-anti-sigma regulatory factor [Vibrio shilonii AK1] Length = 110 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 G++ + E + I+ VDLS + +D+ G I+Y ++ Sbjct: 12 TLKLELYGDFDARGSREAQPQIDDIIHNDW-HQEIEVDLSQVRFMDSSGIGAIVYLYKRL 70 Query: 66 ---HGKIKLQGVSTHIEQLFSLIS 86 K++L+ V+ Q+ L+ Sbjct: 71 VERERKMRLENVTGQPLQIIQLLR 94 >gi|196232813|ref|ZP_03131663.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] gi|196223012|gb|EDY17532.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] Length = 116 Score = 41.5 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 S+ G+ V G ++ + K +S + ++D +T +D+ G ++ Sbjct: 7 SDQGVQVLAIDGEIDLACSPDLRTLLHAYAKK--KSPALLLDFQGVTYVDSSGLATLIEY 64 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + GK L VS + +F L+ + Sbjct: 65 VRLAQPFGGKFGLAHVSERVRTIFDLVRLSE 95 >gi|317121979|ref|YP_004101982.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM 12885] gi|315591959|gb|ADU51255.1| anti-sigma-factor antagonist [Thermaerobacter marianensis DSM 12885] Length = 117 Score = 41.5 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 4/107 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R AG++ +E+ + + D +V+L + ID+ G ++ Sbjct: 11 TLIARLAGDFD-EHGAEVFRHAIERAVRRRAYDHLVVNLQQVGFIDSSGLGALLGRYRRA 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + ++ + G + + + R + +P Sbjct: 70 REDGARVSVVGAPPPVRAVLQMAGLPQRIPLYPDEPAALGAARGVGR 116 >gi|302560778|ref|ZP_07313120.1| translation initiation factor IF-2 [Streptomyces griseoflavus Tu4000] gi|302478396|gb|EFL41489.1| translation initiation factor IF-2 [Streptomyces griseoflavus Tu4000] Length = 229 Score = 41.5 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 11/109 (10%), Positives = 31/109 (28%), Gaps = 6/109 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G +A+ + + + +D+S + +DT G E + Sbjct: 23 DADRALLTPRGELVRGSARALAEKLAQL---PLGTARVDLDMSGVYFMDTAGLEFLEVLR 79 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 + + + ++ L ++ P + S Sbjct: 80 DHGRRRSMPVTATRWNGQPRRILELAGLDTGDPLRLPAPDGTASPESPA 128 >gi|290955484|ref|YP_003486666.1| anti-anti-sigma-factor [Streptomyces scabiei 87.22] gi|260645010|emb|CBG68096.1| putative anti-anti-sigma-factor [Streptomyces scabiei 87.22] Length = 127 Score = 41.5 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 5/97 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ G TV G EI + A S ++DL + D G L+ Sbjct: 17 TDRGRTVLELHGEIDIAAAVEIIPHLDAA--TSGPGARIVIDLRHVEFFDCSGLRLLYRA 74 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 ++ G+++L ++ + Sbjct: 75 RQRVLDRDGELRLVCTHPLTLRVLKVTGLARLLPPAP 111 >gi|311900800|dbj|BAJ33208.1| putative antagonist protein [Kitasatospora setae KM-6054] Length = 130 Score = 41.5 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 35/104 (33%), Gaps = 2/104 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V R AG+ ++ + + + +VDL+ + D+ G +++ Sbjct: 28 DGTVVCRIAGDLDIESLAPARKALAEVLR--GGNRLVVVDLAQVAFCDSSGLNMLLTARA 85 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 + ++ + L+ T + + +P Sbjct: 86 DALAAGAVLRLAAVSHPVERLLEITGAAAVFDVRPTVPAAIAEL 129 >gi|296132048|ref|YP_003639295.1| anti-sigma-factor antagonist [Thermincola sp. JR] gi|296030626|gb|ADG81394.1| anti-sigma-factor antagonist [Thermincola potens JR] Length = 109 Score = 41.5 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 6/87 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY--- 60 +G+ + I + + DLS + ID+ G + Sbjct: 12 GETVQISLSGDLDISSV-NIFRRCTDDLCSD--AREIHFDLSGLEFIDSTGVGALAEMVD 68 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87 +E K+K ++ I ++ +I Sbjct: 69 LLEGKGYKVKFTNITDDIYEILEIIGL 95 >gi|296130453|ref|YP_003637703.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] gi|296022268|gb|ADG75504.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] Length = 111 Score = 41.5 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 2/88 (2%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + G V R G +++ V A++ +VDL+ + +D+ G ++ Sbjct: 7 LRDPGAAVLRVTGRLTMLGAAQLRTTVDRAVD--TGHPLVVVDLAEVPFMDSSGLGALVG 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + ++ EQ+ +++ T Sbjct: 65 GLRAARAASGDLRIAAPCEQVRTVLELT 92 >gi|257792664|ref|YP_003183270.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243] gi|257476561|gb|ACV56881.1| anti-sigma-factor antagonist [Eggerthella lenta DSM 2243] Length = 101 Score = 41.5 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 9/94 (9%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G V + G+ + +++ + + ++ + ++D + + + + G +++ + Sbjct: 11 GGEAVLKLGGHLNTNTAADLEEALEPVFERT---NKVVLDFADLEYLSSAGLRVLVATQK 67 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 + G +++ S I ++F + ++ Sbjct: 68 RVTAAEGALRIVNASDDIREVFDITGLIDVFDVE 101 >gi|71274640|ref|ZP_00650928.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Dixon] gi|71899648|ref|ZP_00681802.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Ann-1] gi|170730906|ref|YP_001776339.1| hypothetical protein Xfasm12_1820 [Xylella fastidiosa M12] gi|71164372|gb|EAO14086.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Dixon] gi|71730600|gb|EAO32677.1| Sulfate transporter/antisigma-factor antagonist STAS [Xylella fastidiosa Ann-1] gi|167965699|gb|ACA12709.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 101 Score = 41.5 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + +G +G + ++ +S + +DL+ + ++D+ G L+ Sbjct: 7 LHRDGNA-LVLSGPLNRDAAIRLWSEIQ---VQSKSNGVCQLDLTGVEQLDSAGVALLAE 62 Query: 61 FMEKYHGKI 69 ME+ ++ Sbjct: 63 VMERIRVQV 71 >gi|169334415|ref|ZP_02861608.1| hypothetical protein ANASTE_00815 [Anaerofustis stercorihominis DSM 17244] gi|169259132|gb|EDS73098.1| hypothetical protein ANASTE_00815 [Anaerofustis stercorihominis DSM 17244] Length = 114 Score = 41.5 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G+ ++ +++ A+ K + + I DLS +T +D+ G L M + Sbjct: 9 GNTLTIKIKGDLDDHVTLDLRENIDYALCKK-EIKNLIFDLSELTFMDSAGIGLFMGRYK 67 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 K + G+ T +Q+ ++ + Sbjct: 68 KISAQNGKCGLVTKDKQIIKILRMS 92 >gi|304396329|ref|ZP_07378210.1| anti-sigma-factor antagonist [Pantoea sp. aB] gi|304355838|gb|EFM20204.1| anti-sigma-factor antagonist [Pantoea sp. aB] Length = 101 Score = 41.5 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G + + I +D++ + +D+ G L+++ Sbjct: 8 EREASTLLLKGELDRDTLMSLWQQRETLIKDVD-----TIDVAGLERVDSSGLALLVHLR 62 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 E + + ++L SLI+ Sbjct: 63 EIARAQGITPCFTGISDKLRSLITL 87 >gi|52841081|ref|YP_094880.1| hypothetical protein lpg0845 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296866|ref|YP_123235.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris] gi|52628192|gb|AAU26933.1| hypothetical protein lpg0845 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750651|emb|CAH12058.1| hypothetical protein lpp0907 [Legionella pneumophila str. Paris] Length = 93 Score = 41.5 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 4/75 (5%) Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70 + + D + A+ + + +DLS +T D+ G LI+ ++ + Sbjct: 11 ELTFKSVVSVRDKLYKALMEDTRGR-FCLDLSEVTHCDSAGLALIIEARKLCKQNNKVFD 69 Query: 71 LQGVSTHIEQLFSLI 85 + G+S + L Sbjct: 70 VIGISPETQSLAEFC 84 >gi|229592480|ref|YP_002874599.1| hypothetical protein PFLU5094 [Pseudomonas fluorescens SBW25] gi|229364346|emb|CAY52106.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 95 Score = 41.5 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G ++E+A + +++ + +DLS +TE+D G +L+ Sbjct: 9 DDTAHVGIDGELTIYTVAELAGAL---LSQMGAAPRLELDLSQVTEMDGAGLQLLAVIQR 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87 + V+ H + + Sbjct: 66 EAGIAGTALSVTGHSHAVMQALQL 89 >gi|222100025|ref|YP_002534593.1| Putative anti-sigma factor antagonist [Thermotoga neapolitana DSM 4359] gi|221572415|gb|ACM23227.1| Putative anti-sigma factor antagonist [Thermotoga neapolitana DSM 4359] Length = 116 Score = 41.5 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + + G + SE+ + + ++ + + ++DLS+++ +D+ G ++ + Sbjct: 17 QEDKIIVKVHGEIDAYNSSELKEQLRNLVSSTDK-KKIVLDLSSVSYMDSAGLGTLVVIL 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + K +S+ E + + TH Sbjct: 76 KDAKINGKEFILSSLKESILRIFKLTH 102 >gi|318058333|ref|ZP_07977056.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actG] gi|318078578|ref|ZP_07985910.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actF] Length = 119 Score = 41.5 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 2/107 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + V G ++ D + + +DL+ +T D+ G +++ Sbjct: 11 ATTAGVVMELTGELDHHTAPDVRDALT--GVRLAPGRQLTLDLAGVTFCDSSGLTVLIAS 68 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 ++ E++ +I + + P +S++ Sbjct: 69 RNHALTAGATLALAAVPERVSRIIRVVGLEPVFPTHPSARAAEDSWR 115 >gi|261253023|ref|ZP_05945596.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891] gi|260936414|gb|EEX92403.1| anti-anti-sigma regulatory factor [Vibrio orientalis CIP 102891] Length = 106 Score = 41.5 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + IT GN + S A + I +D S + +D+ G I+Y Sbjct: 8 ANDTITTLIINGNLDADG-SRFAQPHIDEIIADNTQRDIEIDFSQVQFLDSSGVGAIVYL 66 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 ++ ++++ VS ++ +L+ + + Sbjct: 67 YKRLVERQRNMRIENVSGQPLEIINLLRIDQAIPVNSH 104 >gi|240079834|ref|ZP_04724377.1| hypothetical protein NgonF_00756 [Neisseria gonorrhoeae FA19] gi|268595979|ref|ZP_06130146.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268549767|gb|EEZ44786.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 92 Score = 41.5 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ D + ++ VD + D+ L++ + G Sbjct: 9 TLHIGGDITVKTLTG--DAFGRFRQQCCLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|3287905|sp|O32720|SP2AA_PAEPO RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein AA gi|2529265|gb|AAB81184.1| spoIIAA gene product [Paenibacillus polymyxa] Length = 117 Score = 41.1 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 G+ + R +G + + AI + Q + ++ L + +D+ G +I+ Sbjct: 12 GVLIVRLSGELDHHTSDMVRMQMDEAIQRR-QCEHIVLSLKNLQFMDSSGLGVILGRYKL 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 + + G++ + V+ + +L + Sbjct: 71 INQKGGEMAVCDVNPPVHRLLDM 93 >gi|153871244|ref|ZP_02000467.1| anti-sigma-factor antagonist [Beggiatoa sp. PS] gi|152072289|gb|EDN69532.1| anti-sigma-factor antagonist [Beggiatoa sp. PS] Length = 111 Score = 41.1 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 7/66 (10%) Query: 10 RFAGNWKSPEISEIADDVVMAI-------NKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 R +G + E+ + + K IQ ++DLS +T D+ G ++ Sbjct: 15 RLSGELTFTTVGELLSEFTEKMSLLDNGGAKKIQPAPQVMDLSDVTRTDSAGLAFLIELQ 74 Query: 63 EKYHGK 68 ++ Sbjct: 75 KQTKDA 80 >gi|291438981|ref|ZP_06578371.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672] gi|291341876|gb|EFE68832.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672] Length = 124 Score = 41.1 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + G V R +G S + V A+ S ++DLS + D+ G +++ Sbjct: 10 QGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAAR 67 Query: 60 YFMEKYHGKIKLQ 72 + G ++L Sbjct: 68 RLLRSCQGTLRLI 80 >gi|229846115|ref|ZP_04466227.1| anti-sigma factor B antagonist [Haemophilus influenzae 7P49H1] gi|229811119|gb|EEP46836.1| anti-sigma factor B antagonist [Haemophilus influenzae 7P49H1] Length = 105 Score = 41.1 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62 N G + + + ++ S + + +LS + ID+ G + F+ Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSASTLDKTIVEWNLSDLQHIDSAGFAALCDFL 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 + K + +QL +L Sbjct: 70 RECQKLNKTVRLVYPPKQLLTLADL 94 >gi|282860687|ref|ZP_06269753.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|282564423|gb|EFB69959.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] Length = 124 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + TV R G + V A+ + ++DLS + D+ G +++ Sbjct: 10 QGAWTVLRIRGELDLASAPAVRQSVHGAVAE--GRHDVVLDLSGVFFCDSSGVNVLIATR 67 Query: 60 YFMEKYHGKIKLQ 72 M+ G+++L Sbjct: 68 RLMKSCGGRLRLI 80 >gi|239926725|ref|ZP_04683678.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291435042|ref|ZP_06574432.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291337937|gb|EFE64893.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 139 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 33/105 (31%), Gaps = 2/105 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + ++AD + + S ++DLS +T +D+ G ++ Sbjct: 37 DRHLVTVRDALDLHTAHQLADALQPLLL--TDGHSVLLDLSGVTFLDSTGLTCLIAAYRT 94 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + E++ +++ T ++ P + Sbjct: 95 ARTNGARLVLIAPSERVRHMLALTGVDQVLRSYPTPDSVPDWSAR 139 >gi|315646366|ref|ZP_07899484.1| anti-sigma-factor antagonist [Paenibacillus vortex V453] gi|315278009|gb|EFU41329.1| anti-sigma-factor antagonist [Paenibacillus vortex V453] Length = 117 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 I + R +G + + AI + Q++ ++ L + +D+ G +I+ F+ Sbjct: 13 ILIVRLSGELDHHTADHVRMQLEEAIQRR-QTEHLVLSLKELDFMDSSGLGVILGRYKFI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ GK+ + V + +L + Sbjct: 72 KQKGGKMAVCDVKPQVYRLLEM 93 >gi|262393186|ref|YP_003285040.1| putative anti-sigma B factor antagonist [Vibrio sp. Ex25] gi|262336780|gb|ACY50575.1| putative anti-sigma B factor antagonist [Vibrio sp. Ex25] Length = 106 Score = 41.1 bits (95), Expect = 0.26, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + G + + L I +D+ G ++++ +E Sbjct: 14 ILKLTGALDRDTVPSLWAYAQQW---QPAQAELECSLKEIERVDSAGMVMLIHLLENAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + Q Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103 >gi|145632447|ref|ZP_01788182.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 3655] gi|145634241|ref|ZP_01789952.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittAA] gi|229843878|ref|ZP_04464019.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 6P18H1] gi|144987354|gb|EDJ93884.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 3655] gi|145268685|gb|EDK08678.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae PittAA] gi|229812872|gb|EEP48560.1| predicted NTP binding protein, contains STAS domain [Haemophilus influenzae 6P18H1] Length = 105 Score = 41.1 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 1/86 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62 N G + + + +++S + + +LS + ID+ G + F Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSESTLDKTIVEWNLSGLQHIDSAGFTALCDFF 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + K + +QL +L Sbjct: 70 RECQKINKTVRLVYPPKQLLTLADLV 95 >gi|54310332|ref|YP_131352.1| anti-sigma B factor antagonist [Photobacterium profundum SS9] gi|46914773|emb|CAG21550.1| hypothetical anti-sigma B factor antagonist [Photobacterium profundum SS9] Length = 103 Score = 41.1 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 32/84 (38%), Gaps = 3/84 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 +G + + Q +DLS ++ +D+ G ++++ ++ Sbjct: 17 CLSGVLERDTVPAFWRQ---RCEWMPQGSKVTLDLSGLSRVDSAGMVMLLHLSQQLINAG 73 Query: 70 KLQGVSTHIEQLFSLISFTHRKKI 93 + EQL +L+ +H + + Sbjct: 74 CDFTLLNVPEQLKTLLRLSHVESM 97 >gi|288920523|ref|ZP_06414830.1| anti-sigma-factor antagonist [Frankia sp. EUN1f] gi|288348094|gb|EFC82364.1| anti-sigma-factor antagonist [Frankia sp. EUN1f] Length = 143 Score = 41.1 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 44/121 (36%), Gaps = 7/121 (5%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 V G + + ++ A + +VDL +T +D+ G +I+Y ++ Sbjct: 13 DAVVVHPEGEIDYSSLEPLRQALLDA--RIAGVREIVVDLREVTFLDSQGLAVILYAHQR 70 Query: 65 ---YHGKIKLQGVSTHIEQLFSL--ISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIV 119 G++ L+ ++ + +L S+ ++ +Q + G+ + Sbjct: 71 QRSAGGRLILRNLNENAYRLLSVTNLTTVIDVDHGSQVASAHSPVAPAQGQPARTGQPTL 130 Query: 120 K 120 Sbjct: 131 A 131 >gi|194100079|ref|YP_002003219.1| hypothetical protein NGK_2594 [Neisseria gonorrhoeae NCCP11945] gi|239998071|ref|ZP_04717995.1| hypothetical protein Ngon3_01103 [Neisseria gonorrhoeae 35/02] gi|240116990|ref|ZP_04731052.1| hypothetical protein NgonPID_00768 [Neisseria gonorrhoeae PID1] gi|240122628|ref|ZP_04735584.1| hypothetical protein NgonP_01551 [Neisseria gonorrhoeae PID332] gi|268593923|ref|ZP_06128090.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268602674|ref|ZP_06136841.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268681224|ref|ZP_06148086.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|193935369|gb|ACF31193.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|268547312|gb|EEZ42730.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268586805|gb|EEZ51481.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268621508|gb|EEZ53908.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 92 Score = 41.1 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ D + ++ VD + D+ L++ + G Sbjct: 9 TLHIGGDITVKTLTG--DAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|303248528|ref|ZP_07334785.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] gi|302490058|gb|EFL49979.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] Length = 107 Score = 41.1 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + V R +G + + ++ + I+ + Q + ++ + +D+ G L++ Sbjct: 10 DQALVIRLSGEIVMDLAANLKAELTLLIDAT-QKPEVVCNMRRVDFMDSSGVGLLIGIRR 68 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + S I +L S++ T Sbjct: 69 LCQDKGKAFSVADPSPAIRKLISVLRLTE 97 >gi|291435469|ref|ZP_06574859.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291338364|gb|EFE65320.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] Length = 181 Score = 41.1 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 3/105 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G TV F G EI + A ++DL+ + D G L+ Sbjct: 72 DRGHTVLEFRGEIDIAAAEEIVPHLDAATAA--PDARIVIDLTRVEFFDCSGLRLLFRAR 129 Query: 63 EK-YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + G +L V H L L + + + Sbjct: 130 HRVLAGHGRLHLVCAHPLTLRMLRITDLARLLPPYPTLDAALAQP 174 >gi|302544545|ref|ZP_07296887.1| putative anti anti-sigma factor [Streptomyces hygroscopicus ATCC 53653] gi|302462163|gb|EFL25256.1| putative anti anti-sigma factor [Streptomyces himastatinicus ATCC 53653] Length = 130 Score = 41.1 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 9/95 (9%) Query: 3 ENGI---TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 E+G V + +G + V A+ + S ++DLS + D+ G +++ Sbjct: 7 EDGRGEWVVLQVSGEMDLVTSPAVRQHVHDAVAE--GRHSLVLDLSEVRFCDSSGVGVLI 64 Query: 60 ---YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91 M GK++L + S + Sbjct: 65 AARRLMRSCSGKLRLI-LPPQDAAHGSHVHRVLAA 98 >gi|157363209|ref|YP_001469976.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO] gi|157313813|gb|ABV32912.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO] Length = 121 Score = 41.1 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + + R G +E+ + + + D I+DLS + +D+ +++ + Sbjct: 14 DVWIIRPNGELDMSNSAELKEQIKREFIHQGKVD-LIIDLSHVDYMDSSALGVLIGLQKS 72 Query: 65 YH---GKIKLQGVSTHIEQLFSLISF 87 G + L G+ +++++F + S Sbjct: 73 CRLNGGALILCGLEENLKRIFKMTSL 98 >gi|46202000|ref|ZP_00053976.2| COG1366: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum magnetotacticum MS-1] Length = 100 Score = 41.1 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 5/90 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTI--GAELIM 59 S +G G + D + ++ + +LS + +D+ G LI+ Sbjct: 7 SGDGGLTVTLGGRMTHKDHKAFRDILSKI--NEARTPKVVFNLSRVEFMDSSALGMLLIV 64 Query: 60 Y-FMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + L+G + +E L + Sbjct: 65 RDAAVQQRRAVVLRGATGQVENLIKVAKLH 94 >gi|153834585|ref|ZP_01987252.1| YrbB protein [Vibrio harveyi HY01] gi|148869028|gb|EDL68073.1| YrbB protein [Vibrio harveyi HY01] Length = 106 Score = 41.1 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + G + + L I ID+ G ++++ +E Sbjct: 14 ILKLTGALDRDSVPALWAVAQQW---QPSQTELECSLEEIERIDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + Q Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103 >gi|83309432|ref|YP_419696.1| anti-anti-sigma regulatory factor [Magnetospirillum magneticum AMB-1] gi|82944273|dbj|BAE49137.1| Anti-anti-sigma regulatory factor [Magnetospirillum magneticum AMB-1] Length = 108 Score = 41.1 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 6/91 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + TV +G + ++ + ++ VDLS + ID+ G ++ Sbjct: 7 AAENATVISLSGEVDLRHSPNLRKTLMELM---LEKRPVAVDLSRVEYIDSSGIAGLVEA 63 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 K L +S + ++ L Sbjct: 64 YQMARKNGTLFVLVAISDPVRRVLQLARLDR 94 >gi|240127332|ref|ZP_04739993.1| hypothetical protein NgonS_01550 [Neisseria gonorrhoeae SK-93-1035] gi|268685701|ref|ZP_06152563.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268625985|gb|EEZ58385.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 92 Score = 41.1 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ D + ++ VD + D+ L++ + G Sbjct: 9 TLHIGGDITVKTLT--GDAFGRFRQQCRLKETIAVDFGGVKRADSACVSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|323491741|ref|ZP_08096918.1| putative anti-sigma B factor antagonist [Vibrio brasiliensis LMG 20546] gi|323313997|gb|EGA67084.1| putative anti-sigma B factor antagonist [Vibrio brasiliensis LMG 20546] Length = 80 Score = 41.1 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 3/64 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G + + ++ + + L A+ ID+ G ++++ +E Sbjct: 12 HQCALSGPLDRDTVPALWTELQAF---KPTQNEMELSLKAVERIDSAGMVMLIHLLENAK 68 Query: 67 GKIK 70 K+ Sbjct: 69 NKLS 72 >gi|239945839|ref|ZP_04697776.1| putative anti-sigma factor antagonist [Streptomyces roseosporus NRRL 15998] gi|239992308|ref|ZP_04712972.1| putative anti-sigma factor antagonist [Streptomyces roseosporus NRRL 11379] Length = 120 Score = 41.1 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 35/91 (38%), Gaps = 2/91 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V +G+ ++ + + A + S +VDLS + D+ +++ Sbjct: 18 EREALVLSVSGDLDIDSVTPLGLALSSAADD--GSGPVVVDLSGVGFADSTTVNVLLQGH 75 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +++L S +++L +I + Sbjct: 76 TALGDRLRLAAPSPFMQRLIGMIGLDSALPV 106 >gi|289642188|ref|ZP_06474339.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata] gi|289508034|gb|EFD28982.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata] Length = 128 Score = 41.1 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G+ + + + ++ A + +VDL+ ++ +D+ G +I++ ++ Sbjct: 14 AVVVRPIGDVDYSSLEPLREALLDA--RIAGVRDIVVDLAEVSFMDSQGLAVILFAHQRQ 71 Query: 66 H---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 G++ L+ S I +L + + H +++ QR Sbjct: 72 RSVGGRLILRSPSEEIARLLCVTNVAHVIDVESGNSQRDPAAPRAGG 118 >gi|297204186|ref|ZP_06921583.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] gi|197714124|gb|EDY58158.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] Length = 147 Score = 41.1 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V G ++ + + +++ + ++ + DLS +T +D+ G + + + Sbjct: 46 DGVRVVTVRGEID-HDVKGVLTEALLSEDGAVPPPRIVADLSGVTFMDSSGINVFVAAYQ 104 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 + G ++ + + ++ Sbjct: 105 QVSGAQGWLRIAGAQDSVLRVLQMV 129 >gi|71906372|ref|YP_283959.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] gi|71845993|gb|AAZ45489.1| Sulfate transporter/antisigma-factor antagonist STAS [Dechloromonas aromatica RCB] Length = 101 Score = 41.1 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E G V + G + + S +VD S + +D+ +++ Sbjct: 6 LNEAGKAVIKLVGRFDFNT-HREFRGSYEPLVSDTSVRSVVVDFSGVDYLDSSALGMLLM 64 Query: 61 FMEKYHG---KIKLQGVSTHIEQLFSLISF 87 +K G ++ L GV +++Q+ + +F Sbjct: 65 LRDKLGGANKEVALTGVRGNVKQVLDIANF 94 >gi|328471429|gb|EGF42324.1| putative anti-sigma B factor antagonist [Vibrio parahaemolyticus 10329] Length = 106 Score = 41.1 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + V A L I +D+ G ++++ +E Sbjct: 14 TLTLTGALDRDSVPSLW---VFAQQWKPSQKELECSLEEIERVDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + + Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIKN 103 >gi|16273011|ref|NP_439240.1| putative NTP binding protein, contains STAS domain [Haemophilus influenzae Rd KW20] gi|260580168|ref|ZP_05847998.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|2495688|sp|Q57407|Y1083_HAEIN RecName: Full=Uncharacterized protein HI_1083 gi|1574637|gb|AAC22739.1| anti-sigma factor B antagonist, putative [Haemophilus influenzae Rd KW20] gi|260093452|gb|EEW77385.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 105 Score = 41.1 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAI-VDLSAITEIDTIGAELIMYFM 62 N G + + + ++ S + + +LS + ID+ G + F+ Sbjct: 10 NDKITLFLFGELSRSTLLPMWQQRGVFLSASTLDKTIVEWNLSDLQHIDSAGFAALCDFL 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 + K + +QL +L Sbjct: 70 RECQKLNKTVRLVYPPKQLLTLADL 94 >gi|114564527|ref|YP_752041.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400] gi|114335820|gb|ABI73202.1| SpoIIAA family protein [Shewanella frigidimarina NCIMB 400] Length = 107 Score = 41.1 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G E+ ++ S Q +VDLSA+ +D+ G L++ F++ + Sbjct: 11 CIVSGRLTQDEVKQLWPKRHELFTASTQ----VVDLSALEYVDSAGVALLLAFIKLHASS 66 Query: 69 IKLQGVSTH 77 + VS Sbjct: 67 SQETSVSRQ 75 >gi|258652299|ref|YP_003201455.1| PAS/PAC sensor protein [Nakamurella multipartita DSM 44233] gi|258555524|gb|ACV78466.1| putative PAS/PAC sensor protein [Nakamurella multipartita DSM 44233] Length = 340 Score = 41.1 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (43%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GI V AG+ + + + ++ + +VDL+ + + ++G ++ F Sbjct: 238 DGIPVLHVAGDVDLSTGPQFTALLATLVGQAERPTPVVVDLTDLGHLGSVGLAVLTQFHR 297 Query: 64 KYHGKI 69 + GK Sbjct: 298 RCQGKG 303 >gi|329938574|ref|ZP_08287999.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045] gi|329302547|gb|EGG46438.1| anti-sigma-factor antagonist [Streptomyces griseoaurantiacus M045] Length = 114 Score = 40.7 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 33/103 (32%), Gaps = 2/103 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V G + + ++ +VDLS ++ +D+ G + + + Sbjct: 14 DGVRVVSVRGE--IDNDGKDVLRQALLPADGMEPARLVVDLSGVSFMDSSGINVFVAAHQ 71 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 G ++ E + ++ I P + Sbjct: 72 AVTGTEGWVRIAAAQESVLRVLRLVGVDAIITCHPTLEEALHP 114 >gi|323492705|ref|ZP_08097849.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG 20546] gi|323313080|gb|EGA66200.1| putative anti-sigma regulatory factor [Vibrio brasiliensis LMG 20546] Length = 106 Score = 40.7 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65 GN + + I + +D S + +D+ G I+Y ++ Sbjct: 14 TLIINGNLDADGSRSAQPHIDQIIAED-SGRDVEIDFSQVQFLDSSGVGAIVYLYKRLIE 72 Query: 66 -HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 ++++ VS ++ +L+ + + + Sbjct: 73 RQRSMRIENVSGQPLEIINLLRISQAIPVNSH 104 >gi|163803757|ref|ZP_02197614.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4] gi|159172441|gb|EDP57310.1| putative anti-sigma B factor antagonist [Vibrio sp. AND4] Length = 107 Score = 40.7 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 3/86 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + G + + L I ID+ G ++++ +E Sbjct: 14 ILKLTGALDRDSVPTLWAVAQQW---QPAQTELECSLEEIERIDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKI 93 + +S QL +L ++ + + Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESL 96 >gi|27365950|ref|NP_761478.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6] gi|37679817|ref|NP_934426.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016] gi|320156463|ref|YP_004188842.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O] gi|27362099|gb|AAO11005.1| Anti-anti-sigma regulatory factor [Vibrio vulnificus CMCP6] gi|37198562|dbj|BAC94397.1| anti-anti-sigma regulatory factor [Vibrio vulnificus YJ016] gi|319931775|gb|ADV86639.1| anti anti-sigma regulatory factor SypA [Vibrio vulnificus MO6-24/O] Length = 106 Score = 40.7 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 GN+ + + + IN + VD+S + +D+ G I+Y ++ Sbjct: 12 TLTLSIVGNFDAHGSRQAQIHIDELINND-RHTDIEVDMSGVEFLDSSGIGAIVYLYKRL 70 Query: 66 ---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 ++++ V ++ SL+ H + +++ Sbjct: 71 VERERTMRIENVRGQPLEIISLLRIDHAIPVNSKQ 105 >gi|220931544|ref|YP_002508452.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H 168] gi|219992854|gb|ACL69457.1| anti-sigma-factor antagonist spoIIAA [Halothermothrix orenii H 168] Length = 120 Score = 40.7 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 + R +G + E D + + + I++L + ID+ G I+ ++ Sbjct: 12 LIVRLSGELDMHSVPEFKDKTIKLMENN-NLKHLILNLKGVKFIDSSGVGAILGRYRDLK 70 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 GK+ L + +E++F L Sbjct: 71 DKGGKVMLVSLKPQVEKIFEL 91 >gi|296130596|ref|YP_003637846.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] gi|296022411|gb|ADG75647.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] Length = 111 Score = 40.7 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G + + V + +VDL+ +T +D+ G L++ ++ Sbjct: 11 GARTVVHVGGEIDVASADRLRERVAHLLAAGRTD--LLVDLTGVTFMDSTGLGLLVGTLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + E+L + Sbjct: 69 RVRLAGGRLDLVVDSERLLKVFR 91 >gi|83590341|ref|YP_430350.1| anti-sigma-factor antagonist domain-containing protein [Moorella thermoacetica ATCC 39073] gi|83573255|gb|ABC19807.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella thermoacetica ATCC 39073] Length = 113 Score = 40.7 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E R G ++ ++ +++ + + ++DL+ +T +D+ G +I+ Sbjct: 8 EGKELQARIKGEVDLETADQLRQELEASLD-HARPEVLLLDLAGVTFMDSSGLGVILGRY 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 ++K G+I L + +L L Sbjct: 67 RRLQKKGGRIILYRPQPQVRRLLEL 91 >gi|85713025|ref|ZP_01044062.1| STAS domain protein [Idiomarina baltica OS145] gi|85693128|gb|EAQ31089.1| STAS domain protein [Idiomarina baltica OS145] Length = 100 Score = 40.7 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ +G AG+ I + + +N+ VD++ +T IDT G +++ Sbjct: 10 LANDG--TLSLAGSLTRSAIPAQWNALSQLLNEKTVKQ---VDVAEVTLIDTAGVAILLE 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLI 85 ++ + LQ EQL ++ Sbjct: 65 VIKHNRDAVPLQ-CKGSSEQLRQIV 88 >gi|323498700|ref|ZP_08103690.1| putative anti-sigma B factor antagonist [Vibrio sinaloensis DSM 21326] gi|323316256|gb|EGA69277.1| putative anti-sigma B factor antagonist [Vibrio sinaloensis DSM 21326] Length = 102 Score = 40.7 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E+G + +G + + ++ ++ A V L + ID+ G ++++ Sbjct: 8 VNESG--QYAISGVLDRDSVPALWSELKQM---QMKQHDAEVSLQQLNRIDSAGMVMLIH 62 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +E + +S +QL +L ++ ++ Sbjct: 63 LIEHAKKQNCHIMLSFVPKQLRTLFQLSNVEQH 95 >gi|302522746|ref|ZP_07275088.1| anti-sigma factor [Streptomyces sp. SPB78] gi|302431641|gb|EFL03457.1| anti-sigma factor [Streptomyces sp. SPB78] Length = 115 Score = 40.7 bits (94), Expect = 0.34, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 2/107 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + V G ++ D + + +DL+ +T D+ G +++ Sbjct: 7 ATTAGVVMELTGELDHHTAPDVRDALT--GVRLAPGRQLTLDLAGVTFCDSSGLTVLIAS 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 ++ E++ +I + + P +S++ Sbjct: 65 RNHALTAGATLVLAAVPERVSRIIRVVGLEPVFPTHPTAGAAEDSWR 111 >gi|329934251|ref|ZP_08284330.1| putative anti-sigma factor antagonist [Streptomyces griseoaurantiacus M045] gi|329305847|gb|EGG49702.1| putative anti-sigma factor antagonist [Streptomyces griseoaurantiacus M045] Length = 103 Score = 40.7 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 6/63 (9%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G +G ++A+ + S +VDL+ + +D+ G ++ E Sbjct: 14 DGTGRLAVSGEIDMSNAGDLAEALDS------GSGPLVVDLTGVEYLDSAGLSVLFAHAE 67 Query: 64 KYH 66 + Sbjct: 68 RLE 70 >gi|290476803|ref|YP_003469714.1| hypothetical protein XBJ1_3834 [Xenorhabdus bovienii SS-2004] gi|289176147|emb|CBJ82952.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004] Length = 111 Score = 40.7 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 12/93 (12%) Query: 2 SENG-------ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54 S++G + G + + S+ ++ +D+S + +D+ G Sbjct: 10 SDDGKISWEQTGSTLFLHGTLDRDSLLPLWQQ-----KGSVMAEIENIDVSRLEHVDSTG 64 Query: 55 AELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF 87 L ++ + K S E+L +LI+ Sbjct: 65 LALFVHLKGDMQQRGKRLTFSGISERLETLIAL 97 >gi|239930616|ref|ZP_04687569.1| anti anti sigma factor [Streptomyces ghanaensis ATCC 14672] Length = 126 Score = 40.7 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + G V R +G S + V A+ S ++DLS + D+ G +++ Sbjct: 12 QGGWAVLRVSGELDLLTSSVLRQRVHDAVAD--GRHSLVLDLSDVWFCDSSGVGVLIAAR 69 Query: 60 YFMEKYHGKIKLQ 72 + G ++L Sbjct: 70 RLLRSCQGTLRLI 82 >gi|170717847|ref|YP_001784906.1| hypothetical protein HSM_1586 [Haemophilus somnus 2336] gi|168825976|gb|ACA31347.1| conserved hypothetical protein [Haemophilus somnus 2336] Length = 94 Score = 40.7 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 1/81 (1%) Query: 8 VFRFAGNWKSPEISE-IADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 R G + + + + + + +LS + ID+ G L+ F+ + Sbjct: 2 TLRIMGALSRDTLLPFLQQRDELLSSAELVGQQLVWELSEVNRIDSAGFALLGDFINELE 61 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 ++ Q + QL L Sbjct: 62 KQVSSQKIHNAPIQLEILADL 82 >gi|167770369|ref|ZP_02442422.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM 17241] gi|167667691|gb|EDS11821.1| hypothetical protein ANACOL_01712 [Anaerotruncus colihominis DSM 17241] Length = 130 Score = 40.7 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 44/99 (44%), Gaps = 4/99 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + + G+ E+ + + A+ K+ Q+ + +D +T +D+ G L+M Sbjct: 16 DELVTAHIIGDIDHHNAREMRETIDDAVLKA-QARALELDFRDVTFMDSSGIGLVMGRYK 74 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 M++ G +++ ++ H++++ L + + + Sbjct: 75 LMQEVGGSLRVVNIAGHLKKVMMLAGLDRLAVMDKPERR 113 >gi|162450573|ref|YP_001612940.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56'] gi|161161155|emb|CAN92460.1| hypothetical protein sce2301 [Sorangium cellulosum 'So ce 56'] Length = 298 Score = 40.7 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ V G + ++ ++++ + + Q+ AI+D++ + +IDT A ++ Sbjct: 183 GVLVLPLVGALDAARAQQMMENLLGKVVER-QARVAIIDVTGVPDIDTASASALLQVARA 241 Query: 65 ---YHGKIKLQGVSTHIEQLFSLIS 86 ++ L G+ + Q + Sbjct: 242 VRLLGAQVVLTGIRPEVSQAIVRLD 266 >gi|91225576|ref|ZP_01260650.1| putative anti-sigma B factor antagonist [Vibrio alginolyticus 12G01] gi|91189696|gb|EAS75970.1| putative anti-sigma B factor antagonist [Vibrio alginolyticus 12G01] Length = 106 Score = 40.7 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + G + + L I +D+ G ++++ +E Sbjct: 14 ILKLTGALDRDTVPSLWAYAQQW---QPAQSELECSLKEIERVDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + Q Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103 >gi|302392457|ref|YP_003828277.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501] gi|302204534|gb|ADL13212.1| anti-sigma-factor antagonist [Acetohalobium arabaticum DSM 5501] Length = 112 Score = 40.7 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 + R G+ + + + + + + I++L + ID+ G I+ + Sbjct: 12 LIVRIDGSLDLHTVDTLRKRIDEKLTGEVGIQNMILNLKNVDFIDSSGLGFIIGRYKQIN 71 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 + GK+K+ V+ I+Q+F L Sbjct: 72 NHGGKLKIINVNNSIKQVFEL 92 >gi|317046707|ref|YP_004114355.1| anti-sigma B factor antagonist [Pantoea sp. At-9b] gi|316948324|gb|ADU67799.1| anti-sigma B factor antagonist [Pantoea sp. At-9b] Length = 101 Score = 40.7 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 5/82 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + +G + + + +D++A+ +D+ G L+++ E Sbjct: 11 ASTLALSGKLDRETLLALWRQ-----RDTAMVGIDTIDVAALDRVDSAGLALLVHLREIV 65 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 + S ++L SLI+ Sbjct: 66 RAQGSTPCFSGITDKLQSLITL 87 >gi|242277488|ref|YP_002989617.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638] gi|242120382|gb|ACS78078.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638] Length = 102 Score = 40.7 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63 + + +G ++ + + + + S VDLS + +D+ G ++ Sbjct: 14 VLIKISGEVDFTGTPDLREKMHAFVKQ--TSGEVRVDLSELEYLDSSGLASLIELRRILN 71 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 K +K+ V+ +++L +L Sbjct: 72 KDSRSVKIIAVTDQVDRLLNLTQ 94 >gi|289773548|ref|ZP_06532926.1| anti sigma factor antagonist [Streptomyces lividans TK24] gi|3293548|gb|AAC25772.1| unknown [Streptomyces lividans] gi|289703747|gb|EFD71176.1| anti sigma factor antagonist [Streptomyces lividans TK24] Length = 128 Score = 40.7 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 2/112 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G TV F G +EIA + + ++DL I D G L+ + Sbjct: 19 GHTVLEFRGEIDIASAAEIAPYLDRETGR--PGARVVLDLDGIEFFDCSGLRLLYRARSQ 76 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 + ++ T ++ P + G+ Sbjct: 77 VLDGGGQVRLVCTHAMTLRMLRITGLARLLPPWPTLDEALGVSRPAGRRTGR 128 >gi|296534459|ref|ZP_06896891.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296265215|gb|EFH11408.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 58 Score = 40.7 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55 V R G + + + + ++ A + +DLS +T +DT GA Sbjct: 16 VLRLRGAYTTQSVGPVWQGLLRAAR-----GATRLDLSGVTALDTTGA 58 >gi|170783010|ref|YP_001711344.1| putative anti-sigma factor antagonist [Clavibacter michiganensis subsp. sepedonicus] gi|169157580|emb|CAQ02777.1| putative anti-sigma factor antagonist [Clavibacter michiganensis subsp. sepedonicus] Length = 122 Score = 40.7 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ +TV AG E+ + A++ + +VDL+ + ID+ G ++ + Sbjct: 11 EDDVTVVTAAGMLNMAAAPELRQAIHDALDPAPA--RIVVDLAGVDFIDSSGLGALIAGL 68 Query: 63 EKYHGKI 69 Sbjct: 69 RAARDAG 75 >gi|269967995|ref|ZP_06182033.1| hypothetical protein VMC_34630 [Vibrio alginolyticus 40B] gi|269827352|gb|EEZ81648.1| hypothetical protein VMC_34630 [Vibrio alginolyticus 40B] Length = 106 Score = 40.7 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + G + + L I +D+ G ++++ +E Sbjct: 14 ILKLTGALDRDTVPSLWAYAQQW---QPAQSELECSLKEIERVDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + Q Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103 >gi|297196941|ref|ZP_06914338.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] gi|197715920|gb|EDY59954.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] Length = 172 Score = 40.7 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 3/105 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ V AG + A+VD + +D+ G +++ Sbjct: 67 TADGVHVLALAGEIDHTTADTFRQALTA---DDKFPRHAVVDFRDVIFMDSSGINVLVAA 123 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 H K ++ ++ L+ I P + + Sbjct: 124 NNAAHAKGGSLRLAHTPARVLDLLHVVGLADIIPLYPTLNDALAA 168 >gi|269960376|ref|ZP_06174750.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834987|gb|EEZ89072.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 106 Score = 40.7 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + G + + L I ID+ G ++++ +E Sbjct: 14 ILKLTGALDRDTVPALWAVAQQW---QPSQTELECSLQEIERIDSAGMVMLIHLLEHAKK 70 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + +S QL +L ++ + + + Q Sbjct: 71 QNCHIMLSFVPAQLRTLFQLSNVESLVAKHIQN 103 >gi|238918534|ref|YP_002932048.1| hypothetical protein NT01EI_0584 [Edwardsiella ictaluri 93-146] gi|238868102|gb|ACR67813.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 104 Score = 40.7 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 6/93 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 + G + + EI + + A +D+S ++ +D+ G L+++ Sbjct: 12 DGAILYLQGVLECDSLGEIWQQRQALL-----TGIACLDISELSRVDSAGLALLLHVQNL 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + I L+G+S + L +L + Sbjct: 67 RPEMPIPLRGISDRLRTLITLYNLQEIVPCAAP 99 >gi|269129013|ref|YP_003302383.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268313971|gb|ACZ00346.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 117 Score = 40.7 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++G+TV G ++ + ++ +NK +VD+ + +D+ G +++ Sbjct: 10 TDDGLTVISVEGEIDVYTAPKLREKLIDLVNKGKYH--LLVDMEKVEFLDSTGLGVLVGG 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 +++ + E++ + Sbjct: 68 LKRVRAHDGSLELVCTQERILKIFR 92 >gi|309810818|ref|ZP_07704619.1| STAS domain protein [Dermacoccus sp. Ellin185] gi|308435124|gb|EFP58955.1| STAS domain protein [Dermacoccus sp. Ellin185] Length = 155 Score = 40.7 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++GI V FAG + D + + + +VD+S ++ +D+ G +++ + Sbjct: 49 DDGIAVIAFAGEVDVYTAPVLRDAISKVLAA--GDKAMVVDMSEVSFLDSTGLGVLVGRL 106 Query: 63 EKYH 66 + Sbjct: 107 KAVR 110 >gi|291545017|emb|CBL18126.1| anti-anti-sigma factor [Ruminococcus sp. 18P13] Length = 110 Score = 40.7 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 +E GI G ++ + + + + + I+D + +T +D+ G L+M Sbjct: 6 TEEGILRVMLQGEIDHHSAGQLREQIDCRLEELLP-KRLILDFTGVTFMDSSGIGLVMGR 64 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84 Y G++++ + HI ++ L Sbjct: 65 VRQAAAYGGQVEIAVPAGHIRKVMQL 90 >gi|254497752|ref|ZP_05110525.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254353045|gb|EET11807.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 93 Score = 40.7 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70 ++ + A+ + +D +DLS +T D+ G L++ +K + + Sbjct: 11 ELTFRSAVDVRAQLYKALMDN-TNDHFSLDLSDVTHCDSAGMALLIEARKLCKKNNKTFE 69 Query: 71 LQGVSTHIEQLFSLI 85 + G+S+ L Sbjct: 70 IIGMSSETRSLADFC 84 >gi|254509107|ref|ZP_05121209.1| YrbB protein [Vibrio parahaemolyticus 16] gi|219547988|gb|EED25011.1| YrbB protein [Vibrio parahaemolyticus 16] Length = 102 Score = 40.7 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 39/93 (41%), Gaps = 6/93 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E+ + +G + + + + + ++ + L + +D+ G ++++ Sbjct: 9 VAED---RYVLSGALDRESVPLLWEQLKQW---DVTANEIELSLEQVKRVDSAGMVMLIH 62 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +E + +S +QL +L ++ ++ Sbjct: 63 LLEHAKKQNCHIMLSFVPKQLKTLFQLSNVEQH 95 >gi|307824958|ref|ZP_07655180.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96] gi|307734005|gb|EFO04860.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96] Length = 107 Score = 40.7 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G E+ D ++ + +++ +DLS + EID G +L++ ++ Sbjct: 14 IAITGELTIYTALELKDQLLTGLA---EAEELELDLSEVGEIDAAGLQLLVMIKQQAAVS 70 Query: 69 IKLQGVSTHIEQLFSLISFT 88 K + H + L+ + Sbjct: 71 GKALSFTGHSPVVLDLLDLS 90 >gi|258622790|ref|ZP_05717808.1| hypothetical protein VMD_28540 [Vibrio mimicus VM573] gi|258584978|gb|EEW09709.1| hypothetical protein VMD_28540 [Vibrio mimicus VM573] Length = 109 Score = 40.7 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 3/97 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F G + E+ + Q + L + ID+ G L+++ +E + Sbjct: 14 FSLIGELDRETVPELWIFLKNW---QPQVKQIEISLKQVVRIDSAGMVLLIHLIEHAKVR 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +S EQL +L ++ + + +Q + N Sbjct: 71 NCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107 >gi|161506128|ref|YP_001573240.1| hypothetical protein SARI_04316 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867475|gb|ABX24098.1| hypothetical protein SARI_04316 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 98 Score = 40.7 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 AG ++ + D V A + +D+S I+ +DT G L+ + + + Sbjct: 13 TLMLAGELDQDVLTPLWDARVEA-----MTGVTRIDMSQISRVDTGGLALLAHLVNQAKK 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + +S +++++L Sbjct: 68 QGNAVSLSGVNDKVYALAQL 87 >gi|262193533|ref|YP_003264742.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365] gi|262076880|gb|ACY12849.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365] Length = 103 Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 T G E++ + + + + +VDLS + ID+ G ++ + Sbjct: 13 GDDTTISITGKLDVLTAPEMSTLIDGLVAE--KRRKVVVDLSGLDLIDSSGVAALVGMYK 70 Query: 64 KYH---GKIKLQGVSTHIEQLFSLISF 87 + G + ++G+ +F L+ Sbjct: 71 RVRAEGGDVTIRGIRDQPLAIFKLLRM 97 >gi|163748820|ref|ZP_02156072.1| hypothetical protein KT99_02762 [Shewanella benthica KT99] gi|161331594|gb|EDQ02399.1| hypothetical protein KT99_02762 [Shewanella benthica KT99] Length = 102 Score = 40.3 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 3/92 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + I I + + +D S +T +DT GA+L+ F + Sbjct: 5 TIKLDSELTIRNIQPIFAQLSELL---THDKELHIDASLLTRVDTAGAQLLYLFSQTCAS 61 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + +L + + P+ Sbjct: 62 RSLRVDWLNCQPELQINLDNLGINIPEIAIPE 93 >gi|256789772|ref|ZP_05528203.1| anti-sigma factor antagonist [Streptomyces lividans TK24] Length = 121 Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 9/97 (9%), Positives = 34/97 (35%), Gaps = 3/97 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G+ + AG + D ++ ++ + +VD + +D+ G +++ Sbjct: 20 TGDGVCLVILAGEVDLDGSGHLRDVLLSSVESAPG---TVVDFGEVGFLDSSGINVLISA 76 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ + + ++ + P Sbjct: 77 HRAAESRGVFFRLAAPRDAVERVLRLVGVDALIPCYP 113 >gi|192361462|ref|YP_001983402.1| STAS domain-containing protein [Cellvibrio japonicus Ueda107] gi|190687627|gb|ACE85305.1| STAS domain protein [Cellvibrio japonicus Ueda107] Length = 101 Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 T F G +S++ D + + S +DL +++E+DT G +L++ F Sbjct: 10 DTTTLVFDGELTIYTVSQLKDALFA--EPEVSSAKVALDLQSVSELDTAGVQLLLFIRQF 67 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 ++ L + ++ +FS + Sbjct: 68 FSAVAKEVVLAKTNELVDAVFSTLD 92 >gi|225019369|ref|ZP_03708561.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum DSM 5476] gi|224948000|gb|EEG29209.1| hypothetical protein CLOSTMETH_03322 [Clostridium methylpentosum DSM 5476] Length = 112 Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 +G+ G +I +++ + +S I+D + +T +D+ G L+M Sbjct: 9 DGVLTAYIMGEIDHHTAKDIREEID-HVAESALPTLLILDFTDVTFMDSSGIGLVMGRYK 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 M++ G+ ++ S HI ++ L Sbjct: 68 LMKEIGGETRVTNPSPHINKVMRLAGLDR 96 >gi|308189081|ref|YP_003933212.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1] gi|308059591|gb|ADO11763.1| Anti-sigma F factor antagonist [Pantoea vagans C9-1] Length = 101 Score = 40.3 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + G + + I +D++A+ +D+ G L+++ Sbjct: 8 EREASTLLLKGELDRDTLMSLWQQRETLIKDVD-----TIDVAALERVDSSGLALLVHLR 62 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 E + + ++L SLI+ Sbjct: 63 EIARAQGITPRFTGISDKLHSLITL 87 >gi|295399046|ref|ZP_06809028.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius C56-YS93] gi|312110349|ref|YP_003988665.1| anti-sigma-factor antagonist [Geobacillus sp. Y4.1MC1] gi|294978512|gb|EFG54108.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius C56-YS93] gi|311215450|gb|ADP74054.1| anti-sigma-factor antagonist [Geobacillus sp. Y4.1MC1] Length = 116 Score = 40.3 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 + + R +G E+ + V + S +++L +T +D+ G +I+ Sbjct: 12 DVLIIRLSGELDHHTAEELREKVTDVLE-SASIRHIVLNLEHLTFMDSSGLGVILGRYKQ 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 ++K G++ + +S +++LF + Sbjct: 71 IKKLGGEMIVCSISPTVKRLFDM 93 >gi|302526682|ref|ZP_07279024.1| predicted protein [Streptomyces sp. AA4] gi|302435577|gb|EFL07393.1| predicted protein [Streptomyces sp. AA4] Length = 186 Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 8/92 (8%), Positives = 32/92 (34%), Gaps = 2/92 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G+ ++ V + + + ++DL+ + + + G +++ + Sbjct: 88 AAVLALNGDLDLGTAPKLTAAVAETV--TGKPPVLVLDLAGVDFLASAGLTVLLAACREA 145 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 +++ V++ L + + + Sbjct: 146 PEGTEVRIVASGRATLRPIQLTGLEQSLPLYP 177 >gi|297564138|ref|YP_003683111.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848587|gb|ADH70605.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 157 Score = 40.3 bits (93), Expect = 0.45, Method: Composition-based stats. Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 1/83 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + V G + V A+ ++D + + ID+ G +++ + Sbjct: 53 DAGRVLALDGEIDMATEHRFQEAVTEALTTQP-FGRVVLDCADLRFIDSSGLRVLIRAHK 111 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + +++ I ++ + Sbjct: 112 AAKEQKAVLAIASPIHRVLQTLR 134 >gi|313669178|ref|YP_004049462.1| hypothetical protein NLA_19050 [Neisseria lactamica ST-640] gi|313006640|emb|CBN88106.1| hypothetical protein NLA_19050 [Neisseria lactamica 020-06] Length = 83 Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 2/78 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G+ ++ D+ + ++ VD + D+ L++ + + Sbjct: 1 MHIGGDITVKTLT--EDEFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKDS 58 Query: 69 IKLQGVSTHIEQLFSLIS 86 I L G+ + L L Sbjct: 59 IGLTGIPESVRALSELYE 76 >gi|307609636|emb|CBW99141.1| hypothetical protein LPW_09261 [Legionella pneumophila 130b] Length = 93 Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 4/75 (5%) Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70 + + D + A+ + + +DLS +T D+ G LI+ ++ + Sbjct: 11 ELTFKSVVSVRDKLYKALMEDTRER-FCLDLSEVTHCDSAGLALIIEARKLCKQNNKVFD 69 Query: 71 LQGVSTHIEQLFSLI 85 + G+S + L Sbjct: 70 VIGISPETQSLAEFC 84 >gi|329297308|ref|ZP_08254644.1| anti-sigma B factor antagonist [Plautia stali symbiont] Length = 101 Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 5/82 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + +G + + S + +D++A+ +D+ G L+++ E Sbjct: 11 ASTLALSGKLDRDTLLALWQ-----GRDSAMAGITTIDVAALDRVDSAGLALLVHLREIA 65 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 + S ++L SLI Sbjct: 66 RAQGTTPLFSCITDKLDSLIKL 87 >gi|260779431|ref|ZP_05888322.1| putative anti-sigma B factor antagonist [Vibrio coralliilyticus ATCC BAA-450] gi|260604521|gb|EEX30821.1| putative anti-sigma B factor antagonist [Vibrio coralliilyticus ATCC BAA-450] Length = 102 Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 39/93 (41%), Gaps = 6/93 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S++ ++ G + + + N + S + + L + +D+ G ++++ Sbjct: 9 VSDD---HYQITGALDRESVPALWRSL---CNWKVTSSTIEISLEQVERVDSAGMVMLIH 62 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 +E + +S +QL +L ++ ++ Sbjct: 63 LLEHAKKQNCHIMLSFVPKQLLTLFQLSNVEEF 95 >gi|59802418|ref|YP_209130.1| hypothetical protein NGO2120 [Neisseria gonorrhoeae FA 1090] gi|240013252|ref|ZP_04720165.1| hypothetical protein NgonD_01145 [Neisseria gonorrhoeae DGI18] gi|240015699|ref|ZP_04722239.1| hypothetical protein NgonFA_00778 [Neisseria gonorrhoeae FA6140] gi|240112042|ref|ZP_04726532.1| hypothetical protein NgonM_00390 [Neisseria gonorrhoeae MS11] gi|240114789|ref|ZP_04728851.1| hypothetical protein NgonPID1_00788 [Neisseria gonorrhoeae PID18] gi|240120324|ref|ZP_04733286.1| hypothetical protein NgonPI_00825 [Neisseria gonorrhoeae PID24-1] gi|240124815|ref|ZP_04737701.1| hypothetical protein NgonSK_01085 [Neisseria gonorrhoeae SK-92-679] gi|254492851|ref|ZP_05106022.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260441398|ref|ZP_05795214.1| hypothetical protein NgonDG_10010 [Neisseria gonorrhoeae DGI2] gi|268598100|ref|ZP_06132267.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268600443|ref|ZP_06134610.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268683394|ref|ZP_06150256.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|293397852|ref|ZP_06642058.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62] gi|59719313|gb|AAW90718.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226511891|gb|EEH61236.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268582231|gb|EEZ46907.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268584574|gb|EEZ49250.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268623678|gb|EEZ56078.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|291611798|gb|EFF40867.1| hypothetical protein NGNG_00846 [Neisseria gonorrhoeae F62] Length = 92 Score = 40.3 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ ++ D + ++ VD + D+ L++ + G Sbjct: 9 TLHIGGDITVKTLTG--DAFGRFRQQCRLKETIAVDFGGVKRADSACMSLLLEVLRGCKG 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 ++L G+ + L L Sbjct: 67 SVRLTGIPESVRALSELYE 85 >gi|290959552|ref|YP_003490734.1| anti-sigma-factor-binding protein [Streptomyces scabiei 87.22] gi|260649078|emb|CBG72192.1| putative anti-sigma-factor-binding protein [Streptomyces scabiei 87.22] Length = 162 Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 V +G ++ V A+ S ++DL+ + D+ G +++ M Sbjct: 43 AVLHVSGEMDLLTSPQLRQRVHEAVAD--GRRSLVLDLTDVVFCDSSGVGVLVATRRLMR 100 Query: 64 KYHGKIKLQ 72 G+++L Sbjct: 101 SCRGRLRLI 109 >gi|218289602|ref|ZP_03493822.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius LAA1] gi|258511713|ref|YP_003185147.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218240252|gb|EED07435.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius LAA1] gi|257478439|gb|ACV58758.1| anti-sigma-factor antagonist [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 114 Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 4/100 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 E GI V G + ++ D + + + ++ I +D+ G LI+ Sbjct: 8 ERGIVVIELKGELDHHAVEQMRDRIEQQLAEH-GYRGLVMSFRNIDFMDSSGLGLILGRY 66 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + ++ GK+ L V+ + +LF + + + + Sbjct: 67 RSVSEHGGKMALCEVNPTLRRLFEMSGLLKVIPVYDSEEA 106 >gi|108797387|ref|YP_637584.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119866471|ref|YP_936423.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] gi|108767806|gb|ABG06528.1| anti-sigma-factor antagonist [Mycobacterium sp. MCS] gi|119692560|gb|ABL89633.1| anti-sigma-factor antagonist [Mycobacterium sp. KMS] Length = 113 Score = 40.3 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++G+ V R G + + ++ S +VDLSA ID+ G ++ Sbjct: 9 TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSARVVVDLSATEFIDSSGLGALISG 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ ++ Q+ +++ T Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELT 93 >gi|27364138|ref|NP_759666.1| putative anti-sigma B factor antagonist [Vibrio vulnificus CMCP6] gi|37678643|ref|NP_933252.1| putative anti-sigma B factor antagonist [Vibrio vulnificus YJ016] gi|320157523|ref|YP_004189902.1| ABC transporter auxiliary component YrbC [Vibrio vulnificus MO6-24/O] gi|27360256|gb|AAO09193.1| Putative anti-sigma B factor antagonist [Vibrio vulnificus CMCP6] gi|37197383|dbj|BAC93223.1| putative anti-sigma B factor antagonist [Vibrio vulnificus YJ016] gi|319932835|gb|ADV87699.1| uncharacterized ABC transporter, auxiliary component YrbC [Vibrio vulnificus MO6-24/O] Length = 105 Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +GN ++ + A ++ L + +D+ G ++++ +E + Sbjct: 14 VSLSGNLDREQVPSLWRF---AQTWKPRNSQVEFSLKTVQRVDSAGMVMLIHLLEHAKKQ 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93 +S QL +L ++ + + Sbjct: 71 NCHIMLSFVPAQLRTLFQLSNVEAV 95 >gi|23016440|ref|ZP_00056196.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum magnetotacticum MS-1] Length = 108 Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 6/91 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + T+ +G + ++ + ++ VDLS + ID+ G ++ Sbjct: 7 AAGASTIMTLSGEVDLRHSPTLRKALMDLM---LEKRPVAVDLSRVEYIDSSGIAGLVEA 63 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 K + L +S + ++ L Sbjct: 64 YQMARKNDTRFVLAAISDPVRRVLQLSRLDR 94 >gi|90413010|ref|ZP_01221008.1| hypothetical anti-sigma B factor antagonist [Photobacterium profundum 3TCK] gi|90326025|gb|EAS42464.1| hypothetical anti-sigma B factor antagonist [Photobacterium profundum 3TCK] Length = 103 Score = 40.3 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 32/84 (38%), Gaps = 3/84 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 +G + + Q +DLS ++ +D+ G ++++ ++ Sbjct: 17 CLSGVLERDTVPAFWQQ---RCEWMPQGSKVTLDLSGLSRVDSAGMVMLLHLSQQLITAG 73 Query: 70 KLQGVSTHIEQLFSLISFTHRKKI 93 + EQL +L+ +H + + Sbjct: 74 CDFTLLNVPEQLKTLLRLSHVESM 97 >gi|126433008|ref|YP_001068699.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] gi|126232808|gb|ABN96208.1| anti-sigma-factor antagonist [Mycobacterium sp. JLS] Length = 113 Score = 40.3 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++G+ V R G + + ++ S +VDLSA ID+ G ++ Sbjct: 9 TDSGVLVIRPEGRLNMVAAPALRKQIHELVD--GGSTRVVVDLSATEFIDSSGLGALISG 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ ++ Q+ +++ T Sbjct: 67 LKVARQAGGDLRIAAPTRQVTTVLELT 93 >gi|183220963|ref|YP_001838959.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911058|ref|YP_001962613.1| antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775734|gb|ABZ94035.1| Antagonist of anti-sigma factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779385|gb|ABZ97683.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 113 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60 + GN +I D++ ++ S S I +LS + I + G L+ + Sbjct: 14 GNKMIVHVQGNLDVHNTHKIEKDLLTLVSSS--GKSVIFNLSEVPFISSAGLRLLVTTLR 71 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87 ++ I + G+ +E++F +I Sbjct: 72 HCQEQKISIAICGLQPAVEKVFDIIGM 98 >gi|150389980|ref|YP_001320029.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF] gi|149949842|gb|ABR48370.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF] Length = 111 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 4/89 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + + + +F G EI ++ I + I+DLS +T +D+ G +I+ Sbjct: 9 DHVLIVKFTGELDHHVAEEIRGELDETIAQKRM-KHLILDLSEMTFMDSSGIGVIIGRYK 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + K GK+ + V I ++F L H Sbjct: 68 NITKLGGKVAVINVPEKINKIFKLAGLYH 96 >gi|152968066|ref|YP_001363850.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216] gi|151362583|gb|ABS05586.1| anti-sigma-factor antagonist [Kineococcus radiotolerans SRS30216] Length = 136 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 22/77 (28%), Gaps = 3/77 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T G + ++ + A+ VD +T +D+ G + + Sbjct: 33 ATRVVLTGEIDAELGPDLLEAAEDALAS---GRPLQVDAHHVTFMDSTGLAFLARLASRS 89 Query: 66 HGKIKLQGVSTHIEQLF 82 G+ + + Sbjct: 90 KGRRVTLIRPPAVVKFL 106 >gi|295103336|emb|CBL00880.1| anti-anti-sigma factor [Faecalibacterium prausnitzii SL3/3] Length = 107 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 4/87 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + AG + + A+ + I+DL + +D+ G LI+ Sbjct: 8 AAGETLYAYLAGEIDHDAAQSLRMQLDDALVSR-SPRTLIIDLGGVGFMDSSGIGLILGR 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85 ++LQ ++++ L Sbjct: 67 QRCARVLGTTLRLQHAPAQLQKVLRLA 93 >gi|21219304|ref|NP_625083.1| anti sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|11071273|emb|CAC14346.1| putative anti sigma factor antagonist [Streptomyces coelicolor A3(2)] Length = 166 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 2/112 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G TV F G +EIA + + ++DL I D G L+ + Sbjct: 57 GHTVLEFRGEIDIASAAEIAPYLDRETGR--PGARVVLDLDGIEFFDCSGLRLLYRARSQ 114 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 + ++ T ++ P + G+ Sbjct: 115 VLDGGGQVRLVCTHALTLRMLRITGLARLLPPWPTLDEALGVSRPAGRRTGR 166 >gi|312200150|ref|YP_004020211.1| anti-anti-sigma factor [Frankia sp. EuI1c] gi|311231486|gb|ADP84341.1| anti-anti-sigma factor [Frankia sp. EuI1c] Length = 125 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G+ + + + ++ A + +VDL+ + +D+ G +I+Y + Sbjct: 14 AIVIRPEGDIDYSSLDPLREALMDA--RMAGVSEIVVDLAEVGFLDSQGLAVILYAHRRQ 71 Query: 66 H---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 G++ L+ ++ +L + + T +++ + Sbjct: 72 RSTGGRLILRNLNDMACRLLHVTNLTAVLEVEGGVREPP 110 >gi|187930302|ref|YP_001900789.1| putative signal peptide protein [Ralstonia pickettii 12J] gi|187727192|gb|ACD28357.1| putative signal peptide protein [Ralstonia pickettii 12J] Length = 103 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 7/81 (8%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G E + + + ++ ++ + VD + ++++D+ +++ + Sbjct: 2 LTLSGPLTHREAPRVLREGEALLGQAREAGLAALHVDCAGLSQVDSSALAVLLSWQRTAQ 61 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 + + L +L + Sbjct: 62 DAGIALDIGGAPQALSNLATL 82 >gi|94969770|ref|YP_591818.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis Ellin345] gi|94551820|gb|ABF41744.1| anti-sigma-factor antagonist [Candidatus Koribacter versatilis Ellin345] Length = 116 Score = 40.3 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + V R G E+ V I+ S ++D + +T +D+ G I+ + Sbjct: 17 DAAVPVVRCTGRLVLGLTDELLLPVKQLISAS---KRIVLDFTELTRMDSSGLGTIVRLL 73 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++L+ V I QL + + Sbjct: 74 VTAKAAGCSLELKNVGPPIRQLLGITNLLD 103 >gi|254381596|ref|ZP_04996960.1| hypothetical protein SSAG_01262 [Streptomyces sp. Mg1] gi|194340505|gb|EDX21471.1| hypothetical protein SSAG_01262 [Streptomyces sp. Mg1] Length = 108 Score = 40.3 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 7/64 (10%), Positives = 19/64 (29%), Gaps = 2/64 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 AG ++ + ++DL ++ D+ G +L + + Sbjct: 17 GLRVSLAGELDLYTAEQVGPRLRELAGS--GHRDIVLDLCGLSFCDSAGIDLFIRLHRRC 74 Query: 66 HGKI 69 + Sbjct: 75 RAEG 78 >gi|269126377|ref|YP_003299747.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] gi|268311335|gb|ACY97709.1| anti-sigma-factor antagonist [Thermomonospora curvata DSM 43183] Length = 170 Score = 40.3 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 24/85 (28%), Gaps = 2/85 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMA--INKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G V G + + + + ++D S + D G ++ Sbjct: 59 DGTLVAAVTGEIDLRTVRALRARLSELGRQATAGGGGRLVLDFSGVGFCDAGGLGALVGV 118 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 + + ++ Q + L Sbjct: 119 RNELRARGGELSLARVRPQQWRLFQ 143 >gi|218550474|ref|YP_002384265.1| hypothetical protein EFER_3168 [Escherichia fergusonii ATCC 35469] gi|218358015|emb|CAQ90661.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] gi|324115205|gb|EGC09169.1| hypothetical protein ERIG_00081 [Escherichia fergusonii B253] gi|325498772|gb|EGC96631.1| hypothetical protein ECD227_2869 [Escherichia fergusonii ECD227] Length = 97 Score = 40.3 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 8/83 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 AG ++ + ++ + +DLS I +DT G L+++ ++ Sbjct: 13 TLALAGELDQDVLNPLWEE-----RNEVMQGVTCIDLSKIARVDTGGLALLIHLIDIAKR 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 + L+GV+ + L L + Sbjct: 68 QGNSVTLRGVNEKVYTLAKLYNL 90 >gi|29827643|ref|NP_822277.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29604743|dbj|BAC68812.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 131 Score = 40.3 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 30/89 (33%), Gaps = 4/89 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKS----IQSDSAIVDLSAITEIDTIGAEL 57 +++ + V R AG+ + + + + +D + ++ +D++G Sbjct: 15 ADSTVAVVRVAGDLDYESCHAFVRATELLLAERRETGPPLSALRLDFAELSSVDSMGLSA 74 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLIS 86 ++ + + L L+ Sbjct: 75 LLMVRRRTDAAGVSLYLDERPACLERLLE 103 >gi|295102466|emb|CBL00011.1| anti-anti-sigma factor [Faecalibacterium prausnitzii L2-6] Length = 108 Score = 40.3 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 4/88 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + + + AG + + A+ + ++DL + +D+ G LI+ Sbjct: 8 AADDVLYAYLAGEIDHDAAQGLRIQLDDALL-TRSPRILVMDLGGVGFMDSSGIGLILGR 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLIS 86 G +++Q + ++ L S Sbjct: 67 QRCARTLGGSLRIQHAPEQLRRVLQLAS 94 >gi|319788636|ref|YP_004148111.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1] gi|317467148|gb|ADV28880.1| hypothetical protein Psesu_3057 [Pseudoxanthomonas suwonensis 11-1] Length = 103 Score = 40.3 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 7/93 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 V G + + + + + + ++L AI +D+ G L+ + Sbjct: 16 VLHLEGRLDRAAVVALWPRL-----QPLVDGARTLELGAIQSLDSAGLALLAETAARMRA 70 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 G +++ G + + +L + + P Sbjct: 71 SGPVQVGGDAPGLAELRAAYRLDPQLNYAGAPP 103 >gi|109896885|ref|YP_660140.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c] gi|109699166|gb|ABG39086.1| anti-sigma-factor antagonist [Pseudoalteromonas atlantica T6c] Length = 110 Score = 40.3 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 1/80 (1%) Query: 11 FAGNWKSPEISEIADD-VVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 +GN I D + N + +++L IT+IDT G ++ + + Sbjct: 23 LSGNLNRDTIPNFWPDSLQQLTNAKRTNKPLVLNLEKITQIDTAGLAWLINLIRDAKKQD 82 Query: 70 KLQGVSTHIEQLFSLISFTH 89 + + L +L + Sbjct: 83 IEFSLLNPPDTLLNLAKISD 102 >gi|261401683|ref|ZP_05987808.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] gi|269208209|gb|EEZ74664.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970] Length = 92 Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G+ ++ + + ++ VD + D+ L++ + + Sbjct: 9 ILHIGGDITVKTLTG--EAFERFRQQCRLKETIAVDFGGVKRADSACVSLLLEILRRRKD 66 Query: 68 KIKLQGVSTHIEQLFSLIS 86 I L G+ + L L Sbjct: 67 SIGLTGIPESVRALSELYE 85 >gi|269793476|ref|YP_003312931.1| anti-anti-sigma factor [Sanguibacter keddieii DSM 10542] gi|269095661|gb|ACZ20097.1| anti-anti-sigma factor [Sanguibacter keddieii DSM 10542] Length = 124 Score = 40.0 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +++G TV AG + + + + + ++D+ A++ ID+ G ++ Sbjct: 21 TDDGATVVTLAGEIDA---ALRDQAGEAMVAVVLHNAPVVIDVGAVSFIDSSGLAFLVQL 77 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLI 85 + + L LI Sbjct: 78 HRLCSESDLPLELLDPSDNLLELI 101 >gi|317123917|ref|YP_004098029.1| anti-anti-sigma factor [Intrasporangium calvum DSM 43043] gi|315588005|gb|ADU47302.1| anti-anti-sigma factor [Intrasporangium calvum DSM 43043] Length = 122 Score = 40.0 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 29/84 (34%), Gaps = 3/84 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + + +G + E+ + + I+DL T +D+ ++ ++ Sbjct: 16 VRHVQVSGEIDLANVDEVRQAITTELADDPA--RVILDLRGTTYLDSAAIAMLFRLAQRL 73 Query: 66 H-GKIKLQGVSTHIEQLFSLISFT 88 + L V + +++ T Sbjct: 74 GHRRQDLALVVPRDAPIRAVLELT 97 >gi|229822115|ref|YP_002883641.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] gi|229568028|gb|ACQ81879.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] Length = 115 Score = 40.0 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 27/77 (35%), Gaps = 2/77 (2%) Query: 11 FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIK 70 G+ + +++ ++D S IT +D+ GA ++ + + Sbjct: 15 IEGDLDLSTRPQFHAATAKL--GAVRRPLLVIDASRITFLDSTGAAFLISLADATRKRGG 72 Query: 71 LQGVSTHIEQLFSLISF 87 + E++ ++ Sbjct: 73 AAVLRGADERVLFVLET 89 >gi|297204118|ref|ZP_06921515.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] gi|197714783|gb|EDY58817.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] Length = 124 Score = 40.0 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 9/110 (8%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAI-----NKSIQSDSAIVDLSAITEIDTIGAE 56 + +GI V G+ ++ D + A+ Q+ + DLS +T +D+ G Sbjct: 19 TADGIRVVTLRGDID----HDVKDALTTALLPPDGADDGQAPRVVADLSGVTFLDSTGIN 74 Query: 57 LIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + + ++ ++ E + + + P N Sbjct: 75 VFVQVHQQVSTAQGWLRLAAARESVTRVFELVGLDTVIACHPTVEQALNP 124 >gi|21233048|ref|NP_638965.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766921|ref|YP_241683.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. 8004] gi|188989994|ref|YP_001902004.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris str. B100] gi|21114898|gb|AAM42889.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572253|gb|AAY47663.1| anti-sigma F factor antagonist [Xanthomonas campestris pv. campestris str. 8004] gi|167731754|emb|CAP49934.1| anti-anti-sigma factor [Xanthomonas campestris pv. campestris] Length = 139 Score = 40.0 bits (92), Expect = 0.57, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 40/110 (36%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ +G + ++ + + + I + ++DL+ + I + G I Sbjct: 12 QDTRQRVTLSGRLDTHTFHDLDEALSPLLATPIT--TLVLDLADLEYISSAGIRSIFKAR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + HGK+ + I ++F ++ + + + ++ + Sbjct: 70 KALATRHGKVLVAHPQPQIRKVFDMVKAVPLSDVFASTEELDAYLSTMQR 119 >gi|296133161|ref|YP_003640408.1| anti-sigma-factor antagonist [Thermincola sp. JR] gi|296031739|gb|ADG82507.1| anti-sigma-factor antagonist [Thermincola potens JR] Length = 111 Score = 40.0 bits (92), Expect = 0.58, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64 + + + G++ I + +++ + + ++DLS + ID+ G +I+ ++ Sbjct: 11 VLLVKLTGDFDMAVADNIRCHIDKQLDEGL-VKNVVLDLSDVGFIDSSGLGVILGRYKRI 69 Query: 65 --YHGKIKLQGVSTHIEQLFSL 84 GK+ + G + ++ L Sbjct: 70 SQLGGKMAIIGAQPQVNRILEL 91 >gi|227498776|ref|ZP_03928918.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904230|gb|EEH90148.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 677 Score = 40.0 bits (92), Expect = 0.58, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 53/189 (28%), Gaps = 12/189 (6%) Query: 139 TGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIF 198 + + + + + V VS F G + G + F Sbjct: 47 LWHTFRYGFWWGMDFNAYVFLISLVLVSLPGAFFPAYFALGNTLRLVGGLLYALVLYLAF 106 Query: 199 SIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISP 258 ++ +I + + + +++ A +G+ L Sbjct: 107 MGKMLYYSHFHDIYNQTMKLGAHAEKHNLVDIFF-----HQDHGAWILLGIVPYLYLCRL 161 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTA-----TLANIFTG 313 + A + LP L+ A S + + + A ++ R+ T + Sbjct: 162 ALLA-FLGLPSLSYPAIASPFLRCAFNTVVFLLCIAAFYWFRYGGTFWHDDKPEWDTIPS 220 Query: 314 LIKA-PFMA 321 L+K F A Sbjct: 221 LVKKDIFFA 229 >gi|330505443|ref|YP_004382312.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas mendocina NK-01] gi|328919729|gb|AEB60560.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas mendocina NK-01] Length = 106 Score = 40.0 bits (92), Expect = 0.58, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G +SE + ++ A+ + +DLSA+ E+D G +L++ ++ Sbjct: 12 ILPLEGGLTIYSVSEHMELLMRALA---PAAEVELDLSALDEVDCAGLQLLVLAKQEASR 68 Query: 68 KIKLQGVSTHIEQLFSLISFT 88 + +S H + + Sbjct: 69 QGCQLRLSHHSPAVIEAFELS 89 >gi|183220711|ref|YP_001838707.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910812|ref|YP_001962367.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775488|gb|ABZ93789.1| AntiSigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779133|gb|ABZ97431.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 102 Score = 40.0 bits (92), Expect = 0.58, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 42/90 (46%), Gaps = 4/90 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY-- 60 EN + G+ + ++ ++ I+ ++D ++ +D+ G ++++ Sbjct: 9 ENEKVIIILNGSLSLRDTPKLKTEIKELIDSD-SIKELVLDFKYLSYLDSSGIGILLHTY 67 Query: 61 -FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ + K+K+ VS I+ +FS+ + Sbjct: 68 SWTKEKNKKVKMVHVSNEIKTIFSVANLLE 97 >gi|328880525|emb|CCA53764.1| anti-sigma factor antagonist [Streptomyces venezuelae ATCC 10712] Length = 130 Score = 40.0 bits (92), Expect = 0.59, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 5/99 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 V G + + + A+ + + +VD + + D+ G L++ Sbjct: 25 SGATAVVTVTGELDRDTQEPLREALAGALERRPE--RIVVDCAQLAFCDSTGLNLLLTTR 82 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + G ++L +S + ++F + + + P Sbjct: 83 LEAIEAGGALELAALSPPVARVFDITGVIAVFTVYEELP 121 >gi|162450986|ref|YP_001613353.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56'] gi|161161568|emb|CAN92873.1| positive regulator of sigma-B [Sorangium cellulosum 'So ce 56'] Length = 287 Score = 40.0 bits (92), Expect = 0.59, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 4/86 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + V G ++A+ ++ I + IVDL+ ++ DT A + + Sbjct: 178 DEVLVLPLIGTLDERRSQQLAEALLDKIADK-GAQCCIVDLTGVSAFDTRAASALARIAQ 236 Query: 64 K---YHGKIKLQGVSTHIEQLFSLIS 86 ++ L G+ + Q + Sbjct: 237 AVRLLGVEVVLTGIRPEVAQALIGLE 262 >gi|284044901|ref|YP_003395241.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283949122|gb|ADB51866.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 112 Score = 40.0 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 38/98 (38%), Gaps = 6/98 (6%) Query: 4 NGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 +G TV G ++ ++ + + ++DL + +D+ G +++ Sbjct: 11 DGTTVRLALEGELDIASAGQVERELTRIETDAP--PTLMLDLRRLAFMDSTGLRIVVAAD 68 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + ++ + ++++F + R ++ ++ Sbjct: 69 ARAREQSRRLVVVRGPEAVQRIFRMTRLDERLEMVDEP 106 >gi|171058218|ref|YP_001790567.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] gi|170775663|gb|ACB33802.1| anti-sigma-factor antagonist [Leptothrix cholodnii SP-6] Length = 110 Score = 40.0 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 29/96 (30%), Gaps = 1/96 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F G +E ++ A+ +DL I D+ G +L++ + Sbjct: 12 FALGGELCIQTAAEQRQVLIDALG-QADGRDLALDLHEIHGCDSAGVQLLLATRLQLQRS 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104 + + + ++ + + + P Sbjct: 71 GRRLHLEALSPVVREVLRTYGLQALFDSPPTPGDRR 106 >gi|268318116|ref|YP_003291835.1| sulfate transporter [Rhodothermus marinus DSM 4252] gi|262335650|gb|ACY49447.1| sulfate transporter [Rhodothermus marinus DSM 4252] Length = 591 Score = 40.0 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 36/113 (31%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ + R ++ + D ++ + ++D S+I ++DT A + E Sbjct: 456 GLLLLRVDASFSFANADFLQDLLLDRTRDDPSIRAVVIDASSINDLDTTAAAALQRVAET 515 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + E + + + + + ++ G+ Sbjct: 516 LADRGVALYFAGVKEPVMETMRRAGLVDLLGADHFFLTPHRAVLHILEQWGQA 568 >gi|325928342|ref|ZP_08189538.1| anti-anti-sigma factor [Xanthomonas perforans 91-118] gi|325541276|gb|EGD12822.1| anti-anti-sigma factor [Xanthomonas perforans 91-118] Length = 139 Score = 40.0 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + ++ + + I + ++DLSA+ I + G I Sbjct: 12 QDTRQRVTLTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + + + Sbjct: 70 KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119 >gi|261342636|ref|ZP_05970494.1| putative STAS domain protein [Enterobacter cancerogenus ATCC 35316] gi|288315284|gb|EFC54222.1| putative STAS domain protein [Enterobacter cancerogenus ATCC 35316] Length = 97 Score = 40.0 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 + G ++ + D V A+ ++DL+++T +DT G ++ + + +K Sbjct: 13 TLKLKGELDQDLLNPLWDARVDAMK-----GVTLIDLNSVTRVDTAGVAMLAHLVAVGKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 + +++L G S ++ L L + + Sbjct: 68 HGTQVRLAGASDNVVTLAQLYNLPDDVLPR 97 >gi|294814258|ref|ZP_06772901.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|294326857|gb|EFG08500.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] Length = 147 Score = 40.0 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 TV G E+ V A+ ++DL+ + D+ G +++ + Sbjct: 33 TVLHIRGELDLLSSPEVRRQVHAAVAA--GRRDVVLDLTDVVFCDSSGVGVLIAARRLLN 90 Query: 64 KYHGKIKLQ 72 G+++L Sbjct: 91 SCGGRLRLV 99 >gi|328944333|ref|ZP_08241797.1| hypothetical protein HMPREF0091_11022 [Atopobium vaginae DSM 15829] gi|327491252|gb|EGF23027.1| hypothetical protein HMPREF0091_11022 [Atopobium vaginae DSM 15829] Length = 247 Score = 40.0 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 36/107 (33%), Gaps = 2/107 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 I V G+ ++ + + + + I++L+ ++ ID+ G L+ M + Sbjct: 7 IVVIPLKGDLDVTTVASASALIDSFLYREY--PRMILNLADVSFIDSSGMGLLWSTMRRI 64 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 + + Q+ +++ + +F H Sbjct: 65 RAHQGIISMINVQPQVLAILRRARMLDFIPLRNSDAFCQKDMFQPHA 111 >gi|308233540|ref|ZP_07664277.1| anti-sigma-factor antagonist [Atopobium vaginae DSM 15829] Length = 247 Score = 40.0 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 36/107 (33%), Gaps = 2/107 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 I V G+ ++ + + + + I++L+ ++ ID+ G L+ M + Sbjct: 7 IVVIPLKGDLDVTTVASASALIDSFLYREY--PRMILNLADVSFIDSSGMGLLWSTMRRI 64 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 + + Q+ +++ + +F H Sbjct: 65 RAHQGIISMINVQPQVLAILRRARMLDFIPLRNSDAFCQKDMFQPHA 111 >gi|256379365|ref|YP_003103025.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255923668|gb|ACU39179.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 138 Score = 40.0 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 38/106 (35%), Gaps = 3/106 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+TV R G + +V I + + ++DL + + + G +++ + Sbjct: 36 DGVTVVRVTGEVDMLTAPRLRSEV---IERITTGGTLVLDLGGVGFLGSAGLAVLVEAAQ 92 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + + V + ++ T ++ + P + + Sbjct: 93 RSTREQAAFRVVAVERAVLRPLAATGLGEVFSVHPSVAEALGGDRG 138 >gi|302916667|ref|XP_003052144.1| hypothetical protein NECHADRAFT_92694 [Nectria haematococca mpVI 77-13-4] gi|256733083|gb|EEU46431.1| hypothetical protein NECHADRAFT_92694 [Nectria haematococca mpVI 77-13-4] Length = 1018 Score = 40.0 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 7/194 (3%) Query: 125 SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQ 184 + +LG+++ T E Y + + I + ++ VV ++ G ++ Sbjct: 817 LLASLVLLGILVLFTTEERRPKYHYMLCFMGFIISIAWISTIAGEVVGVLK-TVGVILNI 875 Query: 185 -QGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIA-----GRSGSAIVAEIGSMKIN 238 + L+ F A DL++ + + +G + A+ I M I Sbjct: 876 SEALLGLTIFAAGNSVGDLVADITVARLGYPVMALSACFGGPMLNILLGIGIGGAMMMIQ 935 Query: 239 EEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFF 298 + R ++ + + +T+L ++ + Sbjct: 936 KANKKHRKDPSHPIKYKPYRIQVGGTLMISAITLLVMLVGLLIVVPMNKWILSRKIGWGL 995 Query: 299 SRFHSTATLANIFT 312 + +T+ N+ Sbjct: 996 IALWAVSTIVNVVV 1009 >gi|262401807|ref|ZP_06078372.1| putative anti-sigma B factor antagonist [Vibrio sp. RC586] gi|262351779|gb|EEZ00910.1| putative anti-sigma B factor antagonist [Vibrio sp. RC586] Length = 109 Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 3/104 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S + F G + E+ + Q + L + ID+ G L+++ Sbjct: 7 SADSEQQFSLIGELDRETVPELWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHL 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +E + +S EQL +L ++ + + +Q + N Sbjct: 64 IEHAKVRNCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107 >gi|295401208|ref|ZP_06811181.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius C56-YS93] gi|312109446|ref|YP_003987762.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacillus sp. Y4.1MC1] gi|294976801|gb|EFG52406.1| anti-sigma-factor antagonist [Geobacillus thermoglucosidasius C56-YS93] gi|311214547|gb|ADP73151.1| Sulfate transporter/antisigma-factor antagonist STAS [Geobacillus sp. Y4.1MC1] Length = 102 Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 3/91 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G+ I ++++ + K ++ + I +D+ G L+M + Sbjct: 8 SDEYLEVKLVGDLDIDGTEIIEEELIPHLEKY---RMVNLNFAGIQFVDSTGMGLLMNMV 64 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ K +S + + ++ +I Sbjct: 65 QRLKEKGIKVTISDVQQDVMNVFEILQLPEI 95 >gi|226329323|ref|ZP_03804841.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198] gi|225202509|gb|EEG84863.1| hypothetical protein PROPEN_03228 [Proteus penneri ATCC 35198] Length = 91 Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 V F G + + + +D I+D+SA+ ID+ G L ++ ME+ Sbjct: 7 VLYFQGTLDRETLLSVWQQRKALL-----ADINIIDISALGHIDSTGLALFVHLKAEMEE 61 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + + +QGVS + L +L Sbjct: 62 RNRQFIIQGVSERFQTLITLYDLDE 86 >gi|120402929|ref|YP_952758.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] gi|119955747|gb|ABM12752.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] Length = 104 Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 23/56 (41%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 ++G G +++ ++ + A+ +DLSA+ +D+ ++ Sbjct: 14 DDGSVALTAVGELDLSNVADFSEAIDAAVTAGTDGAPLHIDLSAVDYLDSGAINVL 69 >gi|218778831|ref|YP_002430149.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans AK-01] gi|218760215|gb|ACL02681.1| anti-sigma-factor antagonist [Desulfatibacillum alkenivorans AK-01] Length = 125 Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 5/86 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEK 64 + G+ + S++ V + S D+ + + + G +I+ +EK Sbjct: 16 IIHLGGSLDTVTASQLDKKVDEVLTGSPAH--LTFDMENLEYMSSAGVRVILKASKGLEK 73 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHR 90 GK + I+++F +I Sbjct: 74 NKGKTTFVNLQPQIKKVFEIIRAMPD 99 >gi|269137866|ref|YP_003294566.1| putative anti-sigma B factor antagonist [Edwardsiella tarda EIB202] gi|267983526|gb|ACY83355.1| putative anti-sigma B factor antagonist [Edwardsiella tarda EIB202] gi|304557919|gb|ADM40583.1| anti-sigma-factor antagonist [Edwardsiella tarda FL6-60] Length = 104 Score = 40.0 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 6/91 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-KY 65 G + + + +++ +D VD+S ++ +D+ G L+++ + Sbjct: 14 ATLYLQGALECDSLDALWQQ-----RQTLLTDITCVDISELSRVDSAGLALLLHVQNLRP 68 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 I L+GVS + L +L + Sbjct: 69 ETPIPLRGVSERLRTLITLYNLQDIVVCAAP 99 >gi|310766234|gb|ADP11184.1| Anti-sigma B factor antagonist [Erwinia sp. Ejp617] Length = 98 Score = 40.0 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G + + + + + +D+SA+ +D+ G L+++ + Sbjct: 14 LRLIGELERETLLPLWQQREAVMERVE-----TIDVSALERVDSGGLALLVHLRQIAIDN 68 Query: 69 IKLQGVSTHIEQLFSLISF 87 + S ++L SLI+ Sbjct: 69 GRKPRFSGVTDKLNSLITL 87 >gi|21245055|ref|NP_644637.1| hypothetical protein XAC4343 [Xanthomonas axonopodis pv. citri str. 306] gi|21110786|gb|AAM39173.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 96 Score = 40.0 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 32/89 (35%), Gaps = 7/89 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ + +DLS + +D+ G ++ + Sbjct: 12 TLVITGVLDRAAVTAAWPQAIAQLDGARA-----LDLSGVQRLDSAGVAMLAELAARLRQ 66 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G ++ G ++ +++L + + + Sbjct: 67 AGSGEVVGEASGLDELRAAYRLSPTLDFQ 95 >gi|323702538|ref|ZP_08114201.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM 574] gi|323532512|gb|EGB22388.1| anti-sigma-factor antagonist [Desulfotomaculum nigrificans DSM 574] Length = 112 Score = 40.0 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + R G E+ + +++ ++ I++LS +T ID+ G +I+ + Sbjct: 9 ENTLLVRLGGELDLGVADELRLALDKLLHEK-KAKHLILNLSRVTFIDSSGLGVILGRYK 67 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTH 89 + G+I L G ++++ L Sbjct: 68 RLVQQGGQIILVGAQPPVKRILELSGLLQ 96 >gi|258625816|ref|ZP_05720695.1| hypothetical protein VMB_19960 [Vibrio mimicus VM603] gi|258582054|gb|EEW06924.1| hypothetical protein VMB_19960 [Vibrio mimicus VM603] Length = 109 Score = 39.6 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 3/97 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F G + E+ + Q + L + ID+ G L+++ +E + Sbjct: 14 FSLIGELDRETVPELWIFLKNW---QPQVKQIEISLQQVVRIDSAGMVLLIHLIEHAKVR 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +S EQL +L ++ + + +Q + N Sbjct: 71 NCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107 >gi|242278524|ref|YP_002990653.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638] gi|242121418|gb|ACS79114.1| anti-sigma-factor antagonist [Desulfovibrio salexigens DSM 2638] Length = 112 Score = 39.6 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GI F+ G S ++ + ++ I I+D + I + G +++ Sbjct: 11 DGIITFKLKGRLDSNTSNDFEERLLSQIQD--GESKIILDFENLEYISSAGLRVLLKAAR 68 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 + GK+ L + +I ++F L F I + + Sbjct: 69 ELKGGDGKLMLCSLKDYIREVFDLSGFVSFLPIYDTMDEC 108 >gi|283836262|ref|ZP_06356003.1| putative STAS domain protein [Citrobacter youngae ATCC 29220] gi|291067626|gb|EFE05735.1| putative STAS domain protein [Citrobacter youngae ATCC 29220] Length = 97 Score = 39.6 bits (91), Expect = 0.72, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EKY 65 AG ++ + D V A+ + +DL+ ++ +DT G L+++ + ++ Sbjct: 14 LVLAGELDQDVLNPLWDARVEAMQ-----GVSCIDLNQVSRVDTGGLALLLHLIDQGKQQ 68 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 ++ L GV+ + L L + + Sbjct: 69 GNRVSLAGVNDKVYTLAQLYNLPDDVLPR 97 >gi|256786809|ref|ZP_05525240.1| anti-sigma factor antagonist [Streptomyces lividans TK24] gi|289770699|ref|ZP_06530077.1| anti-sigma factor antagonist [Streptomyces lividans TK24] gi|289700898|gb|EFD68327.1| anti-sigma factor antagonist [Streptomyces lividans TK24] Length = 119 Score = 39.6 bits (91), Expect = 0.73, Method: Composition-based stats. Identities = 10/102 (9%), Positives = 32/102 (31%), Gaps = 2/102 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G ++ D + + ++DL+ +T +D+ G +++ Sbjct: 15 GAVIELTGELDHHTAPDVRDTLSGLGLQ--PGQQLVLDLAGLTFLDSTGLTVLIAARNHA 72 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 ++ +++ +I + P ++ Sbjct: 73 LATDATIALAAVPDRVSRIIRVLGLNQFFPTHPTAQDADTAW 114 >gi|146313261|ref|YP_001178335.1| STAS domain-containing protein [Enterobacter sp. 638] gi|145320137|gb|ABP62284.1| putative STAS domain [Enterobacter sp. 638] Length = 97 Score = 39.6 bits (91), Expect = 0.73, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 +G + + D + ++DL ++T +DT G L+++ + +K Sbjct: 13 TLFLSGELDQDLLIPLWDS-----REFAMQGVTLIDLHSVTRVDTAGVALLVHLVAEGKK 67 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 +KL GVS ++ L L + + Sbjct: 68 QGAAVKLAGVSENVLTLAKLYNLPEDVLPR 97 >gi|254383946|ref|ZP_04999293.1| hypothetical protein SSAG_03693 [Streptomyces sp. Mg1] gi|194342838|gb|EDX23804.1| hypothetical protein SSAG_03693 [Streptomyces sp. Mg1] Length = 132 Score = 39.6 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 10/87 (11%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V AG +++ D + A+ S + VDL+A+T D G ++ + Sbjct: 28 GGAVVVLAGEVDLDRATDVRDVLFSALRSSPR---VTVDLAAVTFCDCAGLNALLRARLE 84 Query: 65 YH-------GKIKLQGVSTHIEQLFSL 84 + ++ G+S + +L L Sbjct: 85 AMESGADGVRRFRIHGMSGQVARLLDL 111 >gi|239827602|ref|YP_002950226.1| anti-sigma-factor antagonist [Geobacillus sp. WCH70] gi|239807895|gb|ACS24960.1| anti-sigma-factor antagonist [Geobacillus sp. WCH70] Length = 116 Score = 39.6 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 + + R +G E+ + V + + + +L +T +D+ G +I+ Sbjct: 12 DVLIIRLSGELDHHTAEELREKVTDTMERE-SIRHIVFNLEHLTFMDSSGLGVILGRYKQ 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 ++ G++ + +S +++LF + Sbjct: 71 IKNLGGEMIVCSISPTVKRLFEM 93 >gi|297564459|ref|YP_003683432.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848908|gb|ADH70926.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 123 Score = 39.6 bits (91), Expect = 0.76, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 37/92 (40%), Gaps = 5/92 (5%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 + G +++ + + A+ I+DLSA+ +D+ G +I+ + Sbjct: 15 VIVAIEGELDIATAADLQEHIQSAVEDH--GPWLILDLSALDFMDSSGLNVIINAYRTVR 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 + G + L ++ + ++ L+ + + Sbjct: 73 ELGGSLALAALNERVTKVVRLVGLHRQVPVHQ 104 >gi|154686589|ref|YP_001421750.1| hypothetical protein RBAM_021580 [Bacillus amyloliquefaciens FZB42] gi|63146680|emb|CAG28931.1| anti-sigma F factor antagonist [Bacillus amyloliquefaciens FZB42] gi|154352440|gb|ABS74519.1| SpoIIAA [Bacillus amyloliquefaciens FZB42] Length = 117 Score = 39.6 bits (91), Expect = 0.76, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 38/97 (39%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V ++ +++L +T +D+ G +I+ + Sbjct: 13 VLCIRLTGELDHHTAESLKQKVTESLEAD-GIRHIVLNLEDLTFMDSSGLGVILGRYKQI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S + +LF + + + + + Sbjct: 72 KQLGGEMVVCAISPAVRRLFDMSGLFKIIRFEQSEQK 108 >gi|21222105|ref|NP_627884.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|5019342|emb|CAB44395.1| putative anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] Length = 119 Score = 39.6 bits (91), Expect = 0.76, Method: Composition-based stats. Identities = 10/102 (9%), Positives = 33/102 (32%), Gaps = 2/102 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G +++ D + + ++DL+ +T +D+ G +++ Sbjct: 15 GAVIELTGELDHHTAADVRDTLPGLGLQ--PGQQLVLDLAGLTFLDSTGLTVLIAARNHA 72 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 ++ +++ +I + P ++ Sbjct: 73 LATDATIALAAVPDRVSRIIRVLGLNQFFPTHPTAQDADTAW 114 >gi|294813000|ref|ZP_06771643.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|326441453|ref|ZP_08216187.1| putative anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|294325599|gb|EFG07242.1| Anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] Length = 122 Score = 39.6 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 5/84 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 V AG ++ + A+ + ++D S + D+ G +++ E Sbjct: 26 VVTPAGELDHHTADALSTPLDAALEQ--GRSRLVIDCSRLEFCDSTGLNVLLSARLKAEA 83 Query: 65 YHGKIKLQGVSTHIEQLFSLISFT 88 G + L G+ + ++ + Sbjct: 84 AGGGVHLTGLRPVVARVLEITGAE 107 >gi|320012336|gb|ADW07186.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331] Length = 122 Score = 39.6 bits (91), Expect = 0.78, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G V R G + V ++ ++D+S ++ D++G ++ Sbjct: 13 SPSGAVVLRLKGVLDHLTAARFRRTVEEIPLRAESP--LVLDMSRLSFCDSVGLTELLLA 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + +L L+ T Sbjct: 71 HRRARTASTSVLLVGVSRELGHLLELT 97 >gi|237802024|ref|ZP_04590485.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024880|gb|EGI04936.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. oryzae str. 1_6] Length = 75 Score = 39.6 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 7 TSQDAARVQIEGELTIYTVTELAARI---LPQVGTAARLDVDLSQVTEMDGAGLQLLAVI 63 Query: 62 MEKYHGKIK 70 + + Sbjct: 64 QREAEKTAQ 72 >gi|160944583|ref|ZP_02091811.1| hypothetical protein FAEPRAM212_02097 [Faecalibacterium prausnitzii M21/2] gi|158444365|gb|EDP21369.1| hypothetical protein FAEPRAM212_02097 [Faecalibacterium prausnitzii M21/2] Length = 107 Score = 39.6 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 4/87 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + AG + + A+ + I+DL + +D+ G LI+ Sbjct: 8 AAGETLYAYLAGEIDHDAAQSLRMQLDDALVSR-SPRTLIIDLGGVGFMDSSGIGLILGR 66 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLI 85 ++LQ ++++ L Sbjct: 67 QRCARVLGTSLRLQHAPAQLQKVLRLA 93 >gi|256393143|ref|YP_003114707.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256359369|gb|ACU72866.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 117 Score = 39.6 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 27/80 (33%), Gaps = 5/80 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKY 65 AG E + + + K ++DL + D+ G ++ + Sbjct: 17 LTLAGELDFHTAPEAREALRLLTLKQ--GGYLVLDLGDVAFFDSSGVATLVHAYRLATQA 74 Query: 66 HGKIKLQGVSTHIEQLFSLI 85 ++L + I ++ ++ Sbjct: 75 GATLELVRIPPKIARVLRMV 94 >gi|107099963|ref|ZP_01363881.1| hypothetical protein PaerPA_01000984 [Pseudomonas aeruginosa PACS2] gi|218893543|ref|YP_002442412.1| hypothetical protein PLES_48311 [Pseudomonas aeruginosa LESB58] gi|254244735|ref|ZP_04938057.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126198113|gb|EAZ62176.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218773771|emb|CAW29585.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] Length = 102 Score = 39.6 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E + AG + + I S Q+ +VD SA+ ++G L++ Sbjct: 6 LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 FM K+ V E + + Sbjct: 65 FMRDARKAGKVLSVRALPEDMREIAK 90 >gi|260914436|ref|ZP_05920905.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] gi|260631537|gb|EEX49719.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] Length = 119 Score = 39.6 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 2/65 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINK-SIQSDSAIVDLSAITEIDTIGAELIMY 60 + + I++ G + + ++ I + DL+ +T ID+ G L+ Sbjct: 14 NSDNISLL-LIGELSRNTLLPFWEQRASFLSAEKIADKNVYWDLAQVTRIDSAGFALLCD 72 Query: 61 FMEKY 65 + + Sbjct: 73 CIGQA 77 >gi|317488951|ref|ZP_07947481.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA] gi|325831058|ref|ZP_08164382.1| STAS domain protein [Eggerthella sp. HGA1] gi|316912025|gb|EFV33604.1| anti-anti-sigma factor [Eggerthella sp. 1_3_56FAA] gi|325486979|gb|EGC89425.1| STAS domain protein [Eggerthella sp. HGA1] Length = 101 Score = 39.6 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 8/94 (8%), Positives = 37/94 (39%), Gaps = 6/94 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 V + G+ + +++ + + ++ ++D + + + + G +++ + Sbjct: 11 GDEAVLKLGGHLNTNTAADLEEALEPVFERTS---KVVLDFADLEYLSSAGLRVLVATQK 67 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 + G +++ S I ++F + ++ Sbjct: 68 RVTAAEGALRIVNASDDIREVFDITGLIDVFDVE 101 >gi|259907022|ref|YP_002647378.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96] gi|224962644|emb|CAX54099.1| Anti-sigma B factor antagonist [Erwinia pyrifoliae Ep1/96] gi|283476817|emb|CAY72655.1| Uncharacterized protein yrbB [Erwinia pyrifoliae DSM 12163] Length = 98 Score = 39.6 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G + + + + + +D+SA+ +D+ G L+++ + Sbjct: 14 LRLIGELERETLLPLWQQREAVMERVE-----TIDVSALERVDSGGLALLVHLRQIAIDN 68 Query: 69 IKLQGVSTHIEQLFSLISF 87 + S ++L SLI+ Sbjct: 69 GRKPRFSGVTDKLNSLITL 87 >gi|53803966|ref|YP_114399.1| STAS domain-containing protein [Methylococcus capsulatus str. Bath] gi|53757727|gb|AAU92018.1| STAS domain protein [Methylococcus capsulatus str. Bath] Length = 120 Score = 39.6 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 23/77 (29%), Gaps = 3/77 (3%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 G + + + +DL + D+ G L++ ++ + Sbjct: 22 SVRGELTFTTAPA---ALKETLPLFRTRNGVAIDLRGVERADSAGIALLIEWVRLARKRG 78 Query: 70 KLQGVSTHIEQLFSLIS 86 + Q+ +L+ Sbjct: 79 VSLRLENMPAQVENLVR 95 >gi|307693167|ref|ZP_07635404.1| anti-sigma-factor antagonist [Ruminococcaceae bacterium D16] Length = 101 Score = 39.6 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 2 SENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +E G G E+ +++ I+ ++ + +DL +T D+ G +++ Sbjct: 6 TEEGRHLTAAVTGELDHHRAKEVMEELDRQIDAALP-RTLTLDLGGLTFTDSSGIAVLLR 64 Query: 61 FMEKY---HGKIKLQGVSTHIEQLFSLISF 87 + G + + +++F Sbjct: 65 ASRRMAQIQGTMTVVHTPQQAQRVFDTAGL 94 >gi|300724961|ref|YP_003714286.1| hypothetical protein XNC1_4185 [Xenorhabdus nematophila ATCC 19061] gi|297631503|emb|CBJ92210.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061] Length = 107 Score = 39.6 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G + + A+ +D+S ++ +D+ G L + Sbjct: 18 ETAGNTLFLKGTLDRDSLLPLWQQKESALEGIDN-----IDVSRLSHVDSTGLALFVRLK 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 +Y ++ S E L +LI+ Sbjct: 73 GEYQQGGRILSFSGVGECLNTLIAL 97 >gi|167951067|ref|ZP_02538141.1| Anti-anti-sigma regulatory factor [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 109 Score = 39.6 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 28/101 (27%), Gaps = 6/101 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G +V G ++ + + +VDLS +T ID+ G ++ Sbjct: 8 REGFSVLYLTGEVDLSCSPNARKAILDCLQNK---RNLLVDLSEVTYIDSSGVASLVEGY 64 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 L VS + L H I Sbjct: 65 QLSRTLELDFSLVRVSDAAMNVLRLARLDHVFPIYPSFEAH 105 >gi|111020564|ref|YP_703536.1| anti-sigma factor antagonist, RsbV [Rhodococcus jostii RHA1] gi|110820094|gb|ABG95378.1| anti-sigma factor antagonist, possible RsbV [Rhodococcus jostii RHA1] Length = 112 Score = 39.6 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ G+ V R AG + + + ++ +VDLSA ID+ G ++ Sbjct: 9 TDEGVAVVRPAGRLNMVAAPRLRELLRDVVDGGTT--CVVVDLSATDFIDSSGLGALIAG 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ ++ EQ+ ++++ T Sbjct: 67 LKAARQAGGDLRIAQPTEQVETVLALT 93 >gi|254388395|ref|ZP_05003630.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|197702117|gb|EDY47929.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] Length = 125 Score = 39.6 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 TV G E+ V A+ ++DL+ + D+ G +++ + Sbjct: 11 TVLHIRGELDLLSSPEVRRQVHAAVAA--GRRDVVLDLTDVVFCDSSGVGVLIAARRLLN 68 Query: 64 KYHGKIKLQ 72 G+++L Sbjct: 69 SCGGRLRLV 77 >gi|330960754|gb|EGH61014.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. maculicola str. ES4326] Length = 96 Score = 39.6 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 3/86 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + + + G ++E+A + + + + VDLS +TE+D G +L+ Sbjct: 7 TTDDPARVQIDGELTIYTVTELAARI---LPQIGSAARMEVDLSHVTEMDGAGLQLLAVI 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF 87 + ++ + + Sbjct: 64 QREAEKAGTALHMTGQSKAVTETFEL 89 >gi|223939413|ref|ZP_03631291.1| anti-sigma-factor antagonist [bacterium Ellin514] gi|223891905|gb|EEF58388.1| anti-sigma-factor antagonist [bacterium Ellin514] Length = 126 Score = 39.6 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 5/89 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MY 60 + AG+ + ++ + ++ S++ I DL+ + I + G + Sbjct: 16 SDAVTVNLAGSLDTATAPDLERQLAPVLSGSVKD--MIFDLAQLKFISSAGLRIFAAARK 73 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++HG+ + I+++F +I Sbjct: 74 TLREHHGQASFVHMQPQIQEVFEIIRSLP 102 >gi|149921651|ref|ZP_01910100.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1] gi|149817495|gb|EDM76965.1| sigma-B regulator RsbR [Plesiocystis pacifica SIR-1] Length = 318 Score = 39.6 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ G+ + + + ++ AI S A++D++ + IDT A+ ++ + Sbjct: 210 DGVLALPLLGSLTTTRAQALMERLLEAIQASST-RFALIDVTGVDTIDTATADHLLRVVR 268 Query: 64 K---YHGKIKLQGVSTHIEQLFSLISFTHRK 91 + + G+ + Q + + Sbjct: 269 ATAMLGTQCIVTGIQPAVAQTLVTLETNLEE 299 >gi|111220402|ref|YP_711196.1| putative anti anti-sigma factor [Frankia alni ACN14a] gi|111147934|emb|CAJ59600.1| putative anti anti-sigma factor [Frankia alni ACN14a] Length = 119 Score = 39.6 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64 V G+ + + + ++ A + +VDL+ ++ +D+ G +I++ ++ Sbjct: 14 AIVVHPVGDIDYSSLDPLREALLDA--RVAGVRDIVVDLAQVSFLDSQGLAVILFAHQRQ 71 Query: 65 --YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 G++ L+ ++ +L + + T ++ + Sbjct: 72 RSAGGRLALRNLNEDAYRLLHVTNLTSVIEVDH 104 >gi|34497966|ref|NP_902181.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC 12472] gi|34103821|gb|AAQ60182.1| hypothetical protein CV_2511 [Chromobacterium violaceum ATCC 12472] Length = 106 Score = 39.6 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 1 MSENGITVFR-FAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + ++G T G ++ D+++ +N + +DLS +TE+D GA+L+ Sbjct: 5 LRQDGETTLAALDGELTIFTAEDMQDELLGLLN----HERVALDLSGLTELDGCGAQLLC 60 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + + K ++ L + Sbjct: 61 ILLAEAARLEKTMAIAAGNPLLDEV 85 >gi|116623784|ref|YP_825940.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus Ellin6076] gi|116226946|gb|ABJ85655.1| anti-sigma-factor antagonist [Candidatus Solibacter usitatus Ellin6076] Length = 114 Score = 39.6 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 1/85 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 ITV G S+ + +V ++K S I DL+ + ID+ G ++ K Sbjct: 13 DITVVELTGRLALGRESQRIEALVEELSKKP-SRKVIFDLTGVDYIDSAGIGMVALASGK 71 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L++ T Sbjct: 72 LKESGGTLALVAPEGRVLQLLNLTQ 96 >gi|325922505|ref|ZP_08184268.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] gi|325924181|ref|ZP_08185741.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] gi|325545312|gb|EGD16606.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] gi|325547013|gb|EGD18104.1| putative NTP binding protein (contains STAS domain) [Xanthomonas gardneri ATCC 19865] Length = 97 Score = 39.6 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 30/84 (35%), Gaps = 7/84 (8%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ +DLS + +D+ G ++ + Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLSGVQRLDSAGVAMLAELAARVRS 67 Query: 67 -GKIKLQGVSTHIEQLFSLISFTH 89 G + + G ++ +++L + + Sbjct: 68 TGTVTVVGEASGLDELRAAYRLSP 91 >gi|239927122|ref|ZP_04684075.1| anti sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] Length = 126 Score = 39.6 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 3/105 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G TV F G EI + A ++DL+ + D G L+ Sbjct: 17 DRGHTVLEFRGEIDIAAAEEIVPHLDAATAA--PDARIVIDLTRVEFFDCSGLRLLFRAR 74 Query: 63 EK-YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + G +L V H L L + + + Sbjct: 75 HRVLAGHGRLHLVCAHPLTLRMLRITDLARLLPPYPTLDAALAQP 119 >gi|302562314|ref|ZP_07314656.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302479932|gb|EFL43025.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 150 Score = 39.6 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 2/96 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G TV F G +EI + MA + ++DL+ + D G L+ Sbjct: 41 DRGHTVLEFRGEIDIAAAAEIVPHLDMATAE--PDARVVIDLTHVEFFDLSGLRLLFRAR 98 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + ++ T ++ +P Sbjct: 99 HRITAGSGRLHLVCTHPLTLRMLRITGLSRLLPPRP 134 >gi|302389827|ref|YP_003825648.1| anti-sigma-factor antagonist [Thermosediminibacter oceani DSM 16646] gi|302200455|gb|ADL08025.1| anti-sigma-factor antagonist [Thermosediminibacter oceani DSM 16646] Length = 107 Score = 39.6 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 I + G + + + + K + + +T +D+ G +++ Sbjct: 5 EDILIVNLKGELDHHMAHLVKEKLEEYLAKR-AFKKILFNFKNVTFMDSSGVGMLIGRYK 63 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 +++ GK+ + + ++F + Sbjct: 64 SLQRIGGKVGAVNIGQQVRRIFEI 87 >gi|156935715|ref|YP_001439631.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC BAA-894] gi|156533969|gb|ABU78795.1| hypothetical protein ESA_03584 [Cronobacter sakazakii ATCC BAA-894] Length = 100 Score = 39.6 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 5/48 (10%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54 R G ++ + + +SI +DLS + +DT G Sbjct: 12 AQLRLNGTLDRETLTPLWEQ-----RQSITDGLQRIDLSGLERVDTAG 54 >gi|15642512|ref|NP_232145.1| anti-sigma B factor antagonist, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591416|ref|ZP_01678696.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 2740-80] gi|121727458|ref|ZP_01680586.1| anti-sigma B factor antagonist, putative [Vibrio cholerae V52] gi|147675756|ref|YP_001218014.1| putative anti-sigma B factor antagonist [Vibrio cholerae O395] gi|153215724|ref|ZP_01950105.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 1587] gi|153801110|ref|ZP_01955696.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-3] gi|153818016|ref|ZP_01970683.1| anti-sigma B factor antagonist, putative [Vibrio cholerae NCTC 8457] gi|153822411|ref|ZP_01975078.1| anti-sigma B factor antagonist, putative [Vibrio cholerae B33] gi|153825811|ref|ZP_01978478.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-2] gi|153829786|ref|ZP_01982453.1| putative anti-sigma B factor antagonist [Vibrio cholerae 623-39] gi|227082635|ref|YP_002811186.1| putative anti-sigma B factor antagonist [Vibrio cholerae M66-2] gi|229507426|ref|ZP_04396931.1| hypothetical protein VCF_002655 [Vibrio cholerae BX 330286] gi|229509649|ref|ZP_04399130.1| hypothetical protein VCE_001049 [Vibrio cholerae B33] gi|229513442|ref|ZP_04402906.1| hypothetical protein VCB_001087 [Vibrio cholerae TMA 21] gi|229516774|ref|ZP_04406220.1| hypothetical protein VCC_000791 [Vibrio cholerae RC9] gi|229524499|ref|ZP_04413904.1| hypothetical protein VCA_002094 [Vibrio cholerae bv. albensis VL426] gi|229527549|ref|ZP_04416941.1| hypothetical protein VCG_000616 [Vibrio cholerae 12129(1)] gi|229606933|ref|YP_002877581.1| hypothetical protein VCD_001842 [Vibrio cholerae MJ-1236] gi|254291434|ref|ZP_04962226.1| anti-sigma B factor antagonist, putative [Vibrio cholerae AM-19226] gi|254851060|ref|ZP_05240410.1| anti-sigma B factor antagonist [Vibrio cholerae MO10] gi|255744506|ref|ZP_05418458.1| putative anti-sigma B factor antagonist [Vibrio cholera CIRS 101] gi|262154670|ref|ZP_06028796.1| putative anti-sigma B factor antagonist [Vibrio cholerae INDRE 91/1] gi|262167546|ref|ZP_06035251.1| putative anti-sigma B factor antagonist [Vibrio cholerae RC27] gi|262191032|ref|ZP_06049241.1| putative anti-sigma B factor antagonist [Vibrio cholerae CT 5369-93] gi|297581363|ref|ZP_06943286.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298500654|ref|ZP_07010458.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657099|gb|AAF95658.1| anti-sigma B factor antagonist, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546732|gb|EAX56907.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 2740-80] gi|121630230|gb|EAX62630.1| anti-sigma B factor antagonist, putative [Vibrio cholerae V52] gi|124114642|gb|EAY33462.1| anti-sigma B factor antagonist, putative [Vibrio cholerae 1587] gi|124123343|gb|EAY42086.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-3] gi|126511451|gb|EAZ74045.1| anti-sigma B factor antagonist, putative [Vibrio cholerae NCTC 8457] gi|126520054|gb|EAZ77277.1| anti-sigma B factor antagonist, putative [Vibrio cholerae B33] gi|146317639|gb|ABQ22178.1| putative anti-sigma B factor antagonist [Vibrio cholerae O395] gi|148874704|gb|EDL72839.1| putative anti-sigma B factor antagonist [Vibrio cholerae 623-39] gi|149740534|gb|EDM54649.1| anti-sigma B factor antagonist, putative [Vibrio cholerae MZO-2] gi|150422624|gb|EDN14579.1| anti-sigma B factor antagonist, putative [Vibrio cholerae AM-19226] gi|227010523|gb|ACP06735.1| putative anti-sigma B factor antagonist [Vibrio cholerae M66-2] gi|227014406|gb|ACP10616.1| putative anti-sigma B factor antagonist [Vibrio cholerae O395] gi|229335181|gb|EEO00666.1| hypothetical protein VCG_000616 [Vibrio cholerae 12129(1)] gi|229338080|gb|EEO03097.1| hypothetical protein VCA_002094 [Vibrio cholerae bv. albensis VL426] gi|229345837|gb|EEO10809.1| hypothetical protein VCC_000791 [Vibrio cholerae RC9] gi|229349319|gb|EEO14275.1| hypothetical protein VCB_001087 [Vibrio cholerae TMA 21] gi|229353123|gb|EEO18062.1| hypothetical protein VCE_001049 [Vibrio cholerae B33] gi|229354931|gb|EEO19852.1| hypothetical protein VCF_002655 [Vibrio cholerae BX 330286] gi|229369588|gb|ACQ60011.1| hypothetical protein VCD_001842 [Vibrio cholerae MJ-1236] gi|254846765|gb|EET25179.1| anti-sigma B factor antagonist [Vibrio cholerae MO10] gi|255738031|gb|EET93424.1| putative anti-sigma B factor antagonist [Vibrio cholera CIRS 101] gi|262023999|gb|EEY42695.1| putative anti-sigma B factor antagonist [Vibrio cholerae RC27] gi|262030510|gb|EEY49148.1| putative anti-sigma B factor antagonist [Vibrio cholerae INDRE 91/1] gi|262033095|gb|EEY51624.1| putative anti-sigma B factor antagonist [Vibrio cholerae CT 5369-93] gi|297534201|gb|EFH73039.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540823|gb|EFH76880.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327485003|gb|AEA79410.1| Uncharacterized protein YrbB [Vibrio cholerae LMA3894-4] Length = 109 Score = 39.6 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 3/104 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S F G + ++ + Q + L + ID+ G L+++ Sbjct: 7 SAENEHQFSLIGELDRETVPKLWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHL 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +E + +S EQL +L ++ + + +Q + N Sbjct: 64 IEHAKVRNCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107 >gi|237809663|ref|YP_002894103.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM 9187] gi|237501924|gb|ACQ94517.1| anti-anti-sigma factor family protein [Tolumonas auensis DSM 9187] Length = 86 Score = 39.6 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + GN + +++++ ++ +D+S++ +ID+ G ++ + + Sbjct: 1 MKLTGNLDAVQVTQLWPGREELFRQN------ELDVSSVNKIDSAGVAFLVKWAQACQAT 54 Query: 69 IKLQGVSTHIEQLFSLISF 87 + V +L LIS Sbjct: 55 NQRLLVQGASPELVQLISL 73 >gi|170068768|ref|XP_001868989.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167864746|gb|EDS28129.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 606 Score = 39.6 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 44/163 (26%), Gaps = 23/163 (14%) Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 +++++ EI + ++ IV G++K + + T Sbjct: 318 PTRVLGFIITVVMAAEIVIGFCPSVVKAFICGGIVGAFGTIKAATSWNLVVT------EK 371 Query: 255 LISPRIWALIISLPLLTILANFSA----------IIGASIVIWKYYDIPFAVFFS-RFHS 303 + A I +L + +IG + Y+ +F + Sbjct: 372 EFIAMLVAGAIVCAILFTVLAVICPIAMIIVCNVVIGFLLCSVFYFGFFGNMFTHPYLVT 431 Query: 304 TATLANIFTGL----IKAPFM--ACAIGIVAMKEGFAVGVHSN 340 +++ G IK G + G + Sbjct: 432 ALLISSTLVGFLLSSIKMFLFANGFLFGAAGLFYGVNAVFSAR 474 >gi|308174133|ref|YP_003920838.1| anti-anti-sigma factor [Bacillus amyloliquefaciens DSM 7] gi|307606997|emb|CBI43368.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus amyloliquefaciens DSM 7] gi|328552734|gb|AEB23226.1| anti-sigma F factor antagonist [Bacillus amyloliquefaciens TA208] gi|328912468|gb|AEB64064.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus amyloliquefaciens LL3] Length = 117 Score = 39.6 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 38/97 (39%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V ++ +++L ++ +D+ G +I+ + Sbjct: 13 VLCIRLTGELDHHTAESLKQKVTESLEAD-GIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S + +LF + + + + + Sbjct: 72 KQLGGEMVVCAISPAVRRLFDMSGLFKIIRFEQSEQK 108 >gi|307544713|ref|YP_003897192.1| anti-sigma-factor antagonist [Halomonas elongata DSM 2581] gi|307216737|emb|CBV42007.1| anti-sigma-factor antagonist [Halomonas elongata DSM 2581] Length = 169 Score = 39.6 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 10/116 (8%), Positives = 37/116 (31%), Gaps = 5/116 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---- 58 ++G+ V + G+ + + D + + ++ +VDL + +D+ + Sbjct: 13 DSGVFVLKLCGDVRL-TLCATLDQQAQQLADTPGLEAVMVDLREASNVDSTALGFLAKVA 71 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 M + + + + ++ ++ F + + + Sbjct: 72 MALRGRLEQAPTIVVDNPDVRRMLDVMGFASYYTLVESPITEPHELHDLTEVPADE 127 >gi|183985150|ref|YP_001853441.1| anti-anti-sigma regulatory factor [Mycobacterium marinum M] gi|183178476|gb|ACC43586.1| anti-anti-sigma regulatory factor [Mycobacterium marinum M] Length = 122 Score = 39.2 bits (90), Expect = 0.93, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+TV G + + + + S + ++DLS + + ++G +++ E Sbjct: 15 DGVTVLSIGGEIDLVTAPALEEAIGAVVADSPTA--LVIDLSGVEFLGSVGLKILAATYE 72 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 K + V+ + Sbjct: 73 KLGTAAEFGVVAQGPATRRPI 93 >gi|317055659|ref|YP_004104126.1| anti-sigma-factor antagonist [Ruminococcus albus 7] gi|315447928|gb|ADU21492.1| anti-sigma-factor antagonist [Ruminococcus albus 7] Length = 119 Score = 39.2 bits (90), Expect = 0.94, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 T+ R +G + ++ +++ S ++D SA+T +D+ G LIM Sbjct: 11 TIARLSGELDHHSARMMRTEIDRELSEKHPSR-LVLDFSAVTFMDSSGIGLIM 62 >gi|115376640|ref|ZP_01463870.1| sulfate permease [Stigmatella aurantiaca DW4/3-1] gi|310819450|ref|YP_003951808.1| carbonate dehydratase [Stigmatella aurantiaca DW4/3-1] gi|115366383|gb|EAU65388.1| sulfate permease [Stigmatella aurantiaca DW4/3-1] gi|309392522|gb|ADO69981.1| Carbonate dehydratase [Stigmatella aurantiaca DW4/3-1] Length = 773 Score = 39.2 bits (90), Expect = 0.97, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G +G S++ D + K +S ++D+SA+T +D+ GA++++ + Sbjct: 440 GAYRVVLSGPLTFMSSSKL-DTLRTQSAKLDRSRGVVIDMSAVTAVDSSGADMLIGLVND 498 Query: 65 Y---HGKIKLQGVSTHIEQLF 82 K+ LQG+ ++ Sbjct: 499 LLNADLKVVLQGLQPEFQRAL 519 >gi|302337831|ref|YP_003803037.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293] gi|301635016|gb|ADK80443.1| anti-sigma-factor antagonist [Spirochaeta smaragdinae DSM 11293] Length = 116 Score = 39.2 bits (90), Expect = 0.97, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 + +G+ + D V I K + +++L + +D+ G +++ ++ Sbjct: 13 IIDISGDMDLYNAHRLKDVVAKLIAKGVS--ELVINLEKVDYLDSSGVGALIHVFTQVKQ 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTH 89 ++++ V +E++ L Sbjct: 71 RELQMRITHVHGSVEKVIRLTKLMD 95 >gi|117929182|ref|YP_873733.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B] gi|117649645|gb|ABK53747.1| anti-sigma-factor antagonist [Acidothermus cellulolyticus 11B] Length = 113 Score = 39.2 bits (90), Expect = 0.97, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 34/85 (40%), Gaps = 2/85 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E TV +G ++ + ++ ++ + IVD+ + +D+ G +++ Sbjct: 9 TEGDRTVVSVSGEIDVYTAPKLREQLIDLVSAGVYH--IIVDMENVEFLDSTGLGVLVGG 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 +++ + E++ + Sbjct: 67 LKRVRAHDGSLRLVCTQERILKIFR 91 >gi|290962382|ref|YP_003493564.1| hypothetical protein SCAB_80771 [Streptomyces scabiei 87.22] gi|260651908|emb|CBG75038.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 268 Score = 39.2 bits (90), Expect = 0.98, Method: Composition-based stats. Identities = 10/96 (10%), Positives = 34/96 (35%), Gaps = 5/96 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 + G+ + ++ + ++ +S + +DL+ + D G ++ + Sbjct: 43 RVLVTVRGDLELGTDDQLRRGLRDSLARSAEG--IDLDLAGVGFCDCSGLNALLSIRQEA 100 Query: 64 -KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 ++ ++ +S +++FSL Sbjct: 101 MEHAKTATIRSISPAAQRVFSLTDTLSLFSPPGPPE 136 >gi|293115756|ref|ZP_06604589.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876] gi|292808406|gb|EFF67611.1| anti-sigma F factor antagonist [Butyrivibrio crossotus DSM 2876] Length = 128 Score = 39.2 bits (90), Expect = 1.00, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 GI + G+ I D++ IN + + + ++ +D+ G L+M Sbjct: 21 GILIVNLGGDLDHHVTEMIRDEIDRKINGQ-KVHTITFNFRNVSFMDSAGIGLLMGRYRK 79 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 +++ G+I + + ++++F + Sbjct: 80 IKEIGGEIYVSNIGQGVQRIFRM 102 >gi|90580200|ref|ZP_01236007.1| hypothetical anti-sigma B factor antagonist [Vibrio angustum S14] gi|90438502|gb|EAS63686.1| hypothetical anti-sigma B factor antagonist [Vibrio angustum S14] Length = 105 Score = 39.2 bits (90), Expect = 1.00, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G + +G + + + +S+ A++DL ++ +D+ G ++++ ++ Sbjct: 14 GNDQYCLSGCLERDTVPAFWRRRNEWV---PESNKALLDLGGLSRVDSAGMVMLLHLHQQ 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + EQL +L+ +H + I Sbjct: 71 LSSAGCDFTLLNVPEQLKTLLRLSHVEPI 99 >gi|325915570|ref|ZP_08177880.1| putative NTP binding protein (contains STAS domain) [Xanthomonas vesicatoria ATCC 35937] gi|325538208|gb|EGD09894.1| putative NTP binding protein (contains STAS domain) [Xanthomonas vesicatoria ATCC 35937] Length = 97 Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 8/89 (8%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G ++ + ++ +DL+ + +D+ G ++ + G Sbjct: 13 TLALTGVLDRAAVTAAWPQAIAQLD-----GVRTLDLTGVQRLDSAGVAMLAELAARLRG 67 Query: 68 KI--KLQGVSTHIEQLFSLISFTHRKKIK 94 + G ++ +++L + + + Sbjct: 68 NGTAAVVGEASGLDELRAAYRLSPTLDFQ 96 >gi|302871073|ref|YP_003839709.1| anti-sigma-factor antagonist [Caldicellulosiruptor obsidiansis OB47] gi|302573932|gb|ADL41723.1| anti-sigma-factor antagonist [Caldicellulosiruptor obsidiansis OB47] Length = 102 Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SENGI V G + D + I+ S S+ I+D++ +T ID+ G + + Sbjct: 9 ISENGI-VIELKGELDIFSSPTLKDKLYSLIDTS--SNDVIIDMNDVTYIDSTGLGVFVG 65 Query: 61 FMEKYHGKIK---LQGVSTHIEQLFSL 84 ++K K L+ + ++ ++F++ Sbjct: 66 ALKKSRQKGTNIVLKNLKPNVRKVFTI 92 >gi|282861220|ref|ZP_06270285.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|282563878|gb|EFB69415.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] Length = 130 Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 2/106 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + V +G E+ I + ++D++ + D+ G ++ ++ Sbjct: 16 DSLAVVTVSGELDVDTAPELRTKATELIGQGCPH--VVLDMAPVEFCDSSGLNALIAIVQ 73 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 H + V+ +QL L+ T + Sbjct: 74 HAHERGGSLSVAAAPDQLTRLLDMTGVGDLMPVHAHVDEAVAHLGR 119 >gi|78050010|ref|YP_366185.1| hypothetical protein XCV4454 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038440|emb|CAJ26185.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 91 Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 9/89 (10%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ + +DLS + +D+ G ++ + Sbjct: 7 TLVITGVLDRAAVTAAWPQAIAQLD-----GARTLDLSGVQRLDSAGVAMLAELAARLRQ 61 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 62 AGSGAVVGEASGLDELRAAYRLSPTLDFQ 90 >gi|148360509|ref|YP_001251716.1| hypothetical protein LPC_2450 [Legionella pneumophila str. Corby] gi|296106424|ref|YP_003618124.1| hypothetical protein lpa_01279 [Legionella pneumophila 2300/99 Alcoy] gi|148282282|gb|ABQ56370.1| conserved hypothetical protein [Legionella pneumophila str. Corby] gi|295648325|gb|ADG24172.1| Hypothetical protein lpa_01279 [Legionella pneumophila 2300/99 Alcoy] Length = 93 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 4/75 (5%) Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70 + + + + A+ + + +DLS +T D+ G LI+ ++ + Sbjct: 11 ELTFKSVVSVRNKLYKALMEDTRER-FCLDLSEVTHCDSAGLALIIEARKLCKQNNKVFD 69 Query: 71 LQGVSTHIEQLFSLI 85 + G+S + L Sbjct: 70 VIGISPETQSLAEFC 84 >gi|89075256|ref|ZP_01161683.1| hypothetical anti-sigma B factor antagonist [Photobacterium sp. SKA34] gi|89048937|gb|EAR54505.1| hypothetical anti-sigma B factor antagonist [Photobacterium sp. SKA34] Length = 105 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 3/89 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G + +G + + + S+ ++DL ++ +D+ G ++++ ++ Sbjct: 14 GNDQYSLSGCLERDTVPAFWRRRNEWV---PDSNKVLLDLGGLSRVDSAGMVMLLHLHQQ 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + EQL +L+ +H + I Sbjct: 71 LSSAGCDFTLLNVPEQLKTLLRLSHVEPI 99 >gi|120406749|ref|YP_956578.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] gi|119959567|gb|ABM16572.1| anti-sigma-factor antagonist [Mycobacterium vanbaalenii PYR-1] Length = 116 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 26/93 (27%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 AG+ + + V + +D + + D+ G ++ + Sbjct: 14 ARVHVAGDLDYGSTGLLLETVSELLVDPSGWQDLHLDFTDLAFCDSAGLSSLVVIHRRTT 73 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + QL ++ T + +P Sbjct: 74 AAGIRLHLDHRPAQLERILRVTGLLEFLTTRPA 106 >gi|330466666|ref|YP_004404409.1| sulfate transporter family protein [Verrucosispora maris AB-18-032] gi|328809637|gb|AEB43809.1| sulfate transporter family protein [Verrucosispora maris AB-18-032] Length = 587 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 34/82 (41%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V R G ++D ++ + + ++D SAIT+IDT GA + E+ Sbjct: 460 AVVRVDGTLYFANAQRLSDQLLTMAGQRTGLAAIVLDASAITDIDTDGATALAELRERLA 519 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 G + ++T + L+ Sbjct: 520 GHDVVLHLATVRGPVRDLLDRA 541 >gi|289669539|ref|ZP_06490614.1| anti-sigma factor antagonist [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 139 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + ++ + + I + ++DLSA+ I + G I Sbjct: 12 QDTRQRVILTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + + + Sbjct: 70 KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLEAMQR 119 >gi|315502946|ref|YP_004081833.1| hypothetical protein ML5_2158 [Micromonospora sp. L5] gi|315409565|gb|ADU07682.1| hypothetical protein ML5_2158 [Micromonospora sp. L5] Length = 275 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G +V AG P + + + + D + + +D + Sbjct: 182 AGDGDSVVALAGELD-PSNHRDFAAALERADPRPVAGRVVFDAAELRFVDHRSLLHLRDH 240 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91 ++ L+ S +L L+ + + Sbjct: 241 ARRHDAVAVLRTPSRAPARLVDLLGLSEVR 270 >gi|302866536|ref|YP_003835173.1| hypothetical protein Micau_2051 [Micromonospora aurantiaca ATCC 27029] gi|302569395|gb|ADL45597.1| hypothetical protein Micau_2051 [Micromonospora aurantiaca ATCC 27029] Length = 275 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G +V AG P + + + + D + + +D + Sbjct: 182 AGDGDSVVALAGELD-PSNHRDFAAALERADPRPVAGRVVFDAAELRFVDHRSLLHLRDH 240 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRK 91 ++ L+ S +L L+ + + Sbjct: 241 ARRHDAVAVLRTPSRAPARLVDLLGLSEVR 270 >gi|329941332|ref|ZP_08290611.1| anti anti sigma factor [Streptomyces griseoaurantiacus M045] gi|329299863|gb|EGG43762.1| anti anti sigma factor [Streptomyces griseoaurantiacus M045] Length = 124 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 5/72 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 V R +G + V + + ++DLS + D+ G +++ Sbjct: 11 GDWAVLRVSGELDLVTAPTLRGRVHDVVAE--GRHRLVLDLSGVFFCDSSGVGVLIAARR 68 Query: 61 FMEKYHGKIKLQ 72 + G+++L Sbjct: 69 LIRSCRGRLRLI 80 >gi|329916013|ref|ZP_08276326.1| anti-sigma-factor antagonist (STAS) domain protein [Oxalobacteraceae bacterium IMCC9480] gi|327544812|gb|EGF30203.1| anti-sigma-factor antagonist (STAS) domain protein [Oxalobacteraceae bacterium IMCC9480] Length = 107 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 3/84 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V R G EI + + + +DLS ++E+DT G +L+M + Sbjct: 3 TRVLRIDGELTIYRADEIK---ALLLAALAEPSDLELDLSGVSELDTAGLQLLMLAKKTA 59 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 + H + + Sbjct: 60 LAGSHALHLVAHSTAVTGVFELLD 83 >gi|315506296|ref|YP_004085183.1| sulfate transporter/antisigma-factor antagonist stas [Micromonospora sp. L5] gi|315412915|gb|ADU11032.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora sp. L5] Length = 114 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 8/87 (9%), Positives = 29/87 (33%), Gaps = 2/87 (2%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 G+ + ++ + + + D + +D+ G +I++ + Sbjct: 14 GGDLAYATAGPLRAEIDRLLTARPT--TLVFDFGGLQFMDSTGLSVIVHAWREGQHAGTA 71 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKP 98 + L +++ T + ++ P Sbjct: 72 IELRAVPRFLETILDLTGVTGLLDRSP 98 >gi|326442650|ref|ZP_08217384.1| putative anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] Length = 128 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 TV G E+ V A+ ++DL+ + D+ G +++ + Sbjct: 14 TVLHIRGELDLLSSPEVRRQVHAAVAA--GRRDVVLDLTDVVFCDSSGVGVLIAARRLLN 71 Query: 64 KYHGKIKLQ 72 G+++L Sbjct: 72 SCGGRLRLV 80 >gi|260778740|ref|ZP_05887632.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC BAA-450] gi|260604904|gb|EEX31199.1| anti-anti-sigma regulatory factor [Vibrio coralliilyticus ATCC BAA-450] Length = 105 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 5/86 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 N I + GN + + I +D + +D+ G ++Y + Sbjct: 10 NEILTLQIDGNLDADGSRYAQQHIDEIIADQ--HGEVEIDFRNVRFLDSSGVGALVYLYK 67 Query: 64 KY---HGKIKLQGVSTHIEQLFSLIS 86 + +++++ V+ ++ +L+ Sbjct: 68 RLVERERQMRIENVTGQPLEIINLLR 93 >gi|116052484|ref|YP_792797.1| hypothetical protein PA14_57830 [Pseudomonas aeruginosa UCBPP-PA14] gi|254238886|ref|ZP_04932209.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|296391162|ref|ZP_06880637.1| hypothetical protein PaerPAb_23539 [Pseudomonas aeruginosa PAb1] gi|313107037|ref|ZP_07793240.1| hypothetical protein PA39016_000840139 [Pseudomonas aeruginosa 39016] gi|115587705|gb|ABJ13720.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170817|gb|EAZ56328.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|310879742|gb|EFQ38336.1| hypothetical protein PA39016_000840139 [Pseudomonas aeruginosa 39016] Length = 102 Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E + AG + + I S Q+ +VD SA+ ++G L++ Sbjct: 6 LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 FM K+ V + + + Sbjct: 65 FMRDARKAGKVLSVRALPDDMREIAK 90 >gi|239906007|ref|YP_002952746.1| hypothetical protein DMR_13690 [Desulfovibrio magneticus RS-1] gi|239795871|dbj|BAH74860.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 115 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 4/89 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAI-NKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G + ++AG +++ + + Q + ++DLSA+ +D+ G ++ Sbjct: 10 GGALLLKYAGEITLEMTADLKRRLEAELGEGEGQVRAVVIDLSAVPFMDSSGIGFLVSCN 69 Query: 63 EKYHGKIK---LQGVSTHIEQLFSLISFT 88 + K L +S +E+ L+ Sbjct: 70 TRMKSSGKAFYLYQLSPAVEKTLGLVQLL 98 >gi|281358604|ref|ZP_06245083.1| anti-sigma-factor antagonist [Victivallis vadensis ATCC BAA-548] gi|281314952|gb|EFA98986.1| anti-sigma-factor antagonist [Victivallis vadensis ATCC BAA-548] Length = 110 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 3/85 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SENG+TV +G S + +++ S IV + + + + G + + Sbjct: 7 SENGVTVLTMSGRLDSATSGPAEQKISEELSR---GGSWIVLMRDLEYVSSAGLRVFLLM 63 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 ++ ++ + ++ Sbjct: 64 AKRLRAAGGKLALAEPAPGVREVLD 88 >gi|72163163|ref|YP_290820.1| anti-sigma factor antagonist [Thermobifida fusca YX] gi|71916895|gb|AAZ56797.1| anti-sigma factor antagonist [Thermobifida fusca YX] Length = 122 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 2/112 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 EN + G+ ++ V A++ I+D SA+ +D+ G I++ Sbjct: 11 ENRSVIVSVEGDLDIATAGDLRSAVQSAVDAH--GPWLILDFSALDFMDSSGLNAIIHAY 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 + ++ E++ +I + + + + L Sbjct: 69 HLVRERGGSLALAAPNERVTKVIRLVGLHRQLPVHRTVAEAVAAMRALVVKQ 120 >gi|330809064|ref|YP_004353526.1| hypothetical protein PSEBR_a2246 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377172|gb|AEA68522.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 105 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + G +E D ++ + +DL + E+DT G +L++ ++ Sbjct: 9 RRILVLEGPLTIYTAAERKDLLLELF---PLAQEVEMDLGGVDEMDTAGLQLLVLIKQE 64 >gi|326777447|ref|ZP_08236712.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1] gi|326657780|gb|EGE42626.1| anti-anti-sigma factor [Streptomyces cf. griseus XylebKG-1] Length = 124 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + TV R +G + V A+ + ++DLS + D+ G +++ Sbjct: 10 QGSWTVLRMSGELDLVTSPVVRQSVHEAVAE--GQHDVVLDLSEVFFCDSSGVGVLIASR 67 Query: 60 YFMEKYHGKIKLQ 72 M+ G+++L Sbjct: 68 RLMKSCGGRLRLV 80 >gi|302867298|ref|YP_003835935.1| sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|302570157|gb|ADL46359.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] Length = 114 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 8/87 (9%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 G+ + ++ + + + D + +D+ G +I++ + Sbjct: 14 GGDLAYATAGPLRAEIDRLLTARPT--TLVFDFGGLQFMDSTGLSVIVHAWREGQHAGTA 71 Query: 72 QGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + L +++ T + ++ P Sbjct: 72 IELRSVPRFLETILDLTGVTGLLDRSP 98 >gi|255600593|ref|XP_002537488.1| conserved hypothetical protein [Ricinus communis] gi|223516151|gb|EEF24895.1| conserved hypothetical protein [Ricinus communis] Length = 385 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 1/79 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 +G ++ I + + +DLS + + G L++ ++ Sbjct: 227 TLSVSGVLDFETTVQLLAQGREWIESAAPA-QFTIDLSRVEYSSSAGLALLLEWLRIAEV 285 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K K ++ + +L+ Sbjct: 286 KQKQVALTGMPAHMQALVR 304 >gi|242241044|ref|YP_002989225.1| anti-sigma B factor antagonist [Dickeya dadantii Ech703] gi|242133101|gb|ACS87403.1| putative anti-sigma B factor antagonist [Dickeya dadantii Ech703] Length = 100 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ENG V + G+ + + +N + +DLS + +D+ G L+++F Sbjct: 10 ENG--VLQLEGDLDRDTLLPLWQQREALLNGVGE-----LDLSRLRRVDSSGLALLLHFH 62 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISF 87 + + K ++ ++L +LI Sbjct: 63 HQQQQQEKELNITGASDRLSTLIQL 87 >gi|183220971|ref|YP_001838967.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911066|ref|YP_001962621.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775742|gb|ABZ94043.1| Anti-Sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779393|gb|ABZ97691.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 123 Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 26/54 (48%) Query: 35 IQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFT 88 + +DL+ I ID+ G + +++ ++ H K ++ ++ H + ++ Sbjct: 40 PKGKRTKLDLNGIERIDSAGIQFLIFIKKRSHSKHQVLELTNHSLPVLKVLDLL 93 >gi|205373762|ref|ZP_03226564.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus coahuilensis m4-4] Length = 121 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + V R G E+ + I + Q +++L ++ +D+ G +I+ + Sbjct: 16 VMVIRLQGELDHHAAEELREKASNMI-QDYQVKHIVLNLKQLSFMDSSGLGVILGRYKEI 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFK 108 ++++G++ + VS ++++F L ++ + + +F Sbjct: 75 KQHNGEMVVCEVSPAVKRIFELSGLFKIVHLEATEEEALNRLGAFV 120 >gi|254382337|ref|ZP_04997697.1| anti-sigma factor antagonist [Streptomyces sp. Mg1] gi|194341242|gb|EDX22208.1| anti-sigma factor antagonist [Streptomyces sp. Mg1] Length = 107 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G ++ + A++ ++DL+ + D G +IM Sbjct: 4 RGDHAELAVGGRLDVRSAADARTALHSALDD--GRGDLVLDLTGLDSWDATGLGVIMGAH 61 Query: 63 EKYHGKIK---LQGVSTHIEQLFSLISFTH 89 + + L+GV +++L Sbjct: 62 RRAGRTGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|193222250|emb|CAL60919.2| putative N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [Herminiimonas arsenicoxydans] Length = 358 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 6/90 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + +G W+ + + + A + +D + +T ID+ L+M Sbjct: 254 QGSDCIIAASGAWEEGNLGALREVFASATARPFH---IRLDFTDVTYIDSACMALLMLLF 310 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTH 89 K + + V +++L L + Sbjct: 311 GHQSKIGYEFSISNVQPAVQRLLHLFCADY 340 >gi|256397550|ref|YP_003119114.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256363776|gb|ACU77273.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 113 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ENG T+ + G ++ + +V + IVD+ + +D+ G +++ + Sbjct: 10 ENGRTIVKVGGEIDVYTAPKLREQLVELVGAGKYH--LIVDMEDVDFLDSTGLGVLVGGL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86 ++ + E++ + Sbjct: 68 KRVRAHDGSLRLVCTQERILKIFR 91 >gi|134093971|ref|YP_001099046.1| putative N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [Herminiimonas arsenicoxydans] Length = 354 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 6/90 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + +G W+ + + + A + +D + +T ID+ L+M Sbjct: 250 QGSDCIIAASGAWEEGNLGALREVFASATARPFH---IRLDFTDVTYIDSACMALLMLLF 306 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTH 89 K + + V +++L L + Sbjct: 307 GHQSKIGYEFSISNVQPAVQRLLHLFCADY 336 >gi|317969742|ref|ZP_07971132.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Synechococcus sp. CB0205] Length = 115 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 43/107 (40%), Gaps = 3/107 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G +F F G + + + + + Q ++DLS I ID+ G ++ F Sbjct: 12 QDGCLLFSFTGQLDAYSEKQFLAFINDHLTSTPQP--LVLDLSKIDFIDSSGLGALVQFA 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + + + K+Q + ++ + ++ + +P + + Sbjct: 70 KHCNDQ-KIQFLVVGNARVVQTVKLVRLEEFLHLQPDLNTALGAIAA 115 >gi|302865110|ref|YP_003833747.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029] gi|302567969|gb|ADL44171.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029] Length = 118 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 33/81 (40%), Gaps = 2/81 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V AG+ + D ++ + + + +VDL+ + +D+ G ++ + Sbjct: 14 GPVIEVAGDLDMASAPTLRDRLLEVVE--TGARTVVVDLTQVGFVDSSGLGALVLVYKNL 71 Query: 66 HGKIKLQGVSTHIEQLFSLIS 86 + G++ + + ++ S Sbjct: 72 RERDGWLGLAVVRQSIRNVFS 92 >gi|320012669|gb|ADW07519.1| anti-sigma-factor antagonist [Streptomyces flavogriseus ATCC 33331] Length = 130 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 5/117 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---ELIMY 60 + I V G + + I + ++D++ + D+ G I+ Sbjct: 16 DSIAVLTVEGEIDVDSAPALRTRALELIRR--GRPHVVLDMAPVRFCDSSGLNTMIGILR 73 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + HG + L G H+ +L + + + G + Sbjct: 74 YAKDRHGSLSLVGAPPHLRRLLDVTGVGELMPVLPTVAEALTHIVGAGEAPEGQGAR 130 >gi|89099503|ref|ZP_01172379.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL B-14911] gi|89085889|gb|EAR65014.1| anti-anti-sigma factor (antagonist of RsbW) [Bacillus sp. NRRL B-14911] Length = 110 Score = 38.8 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 6/100 (6%) Query: 1 MSENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + EN V + +G + ++ + + K ++ +VDLS ++ +D+ G + + Sbjct: 7 LKENDTLVQAKISGEIDAYTAPKLRESLFPLSEK--EAVEMVVDLSEVSYMDSTGLGVFV 64 Query: 60 YFMEKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + GK ++ G+S +++LF + I +Q Sbjct: 65 GVFKNVRSNNGKFQIVGLSERLKRLFEITGLADIIDINSQ 104 >gi|331694199|ref|YP_004330438.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] gi|326948888|gb|AEA22585.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] Length = 139 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 5/125 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQS---DSAIVDLSAITEIDTIGAELIMYFM 62 + R AG S + V + + + + I+DL+ I DT G E + Sbjct: 17 GHIVRAAGELSGRTGSRLVRLVERLVEDTPRPAGPGALIIDLAQIRRFDTDGVEALHRAF 76 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFI 122 + ++ + L + ++ P + + H G+ V+ + Sbjct: 77 GRAGSAGVSMFLTGLEGRRSLLPHDVD--GLLDRLPVLDDVELAELDNFSHTGRTGVRHL 134 Query: 123 NDSCS 127 Sbjct: 135 AIVGG 139 >gi|284028560|ref|YP_003378491.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836] gi|283807853|gb|ADB29692.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836] Length = 109 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G TV G ++ + +V ++ +VDL + +D+ G +++ + Sbjct: 10 EGGRTVVEVGGEIDVYTAPKLRETIVSLVDA--GHYDLVVDLERVEFLDSTGLGVLVGGL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 ++ + E+L + T K+ P + Sbjct: 68 KRVRTHDGSLSLVCTQERLLKIFRITGLTKVFEIHPDVA 106 >gi|170037443|ref|XP_001846567.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167880675|gb|EDS44058.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 575 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 51/158 (32%), Gaps = 13/158 (8%) Query: 195 AEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRI 254 +++++ EI + ++ IV G++K + + T +F+ + Sbjct: 287 PTRVLGFIITVVMAAEIVIGFCPSVVKAFICGGIVGVFGTIKAATSWNLVVTEK-EFIAM 345 Query: 255 LISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHS------TATLA 308 L++ I I+ L I I+ ++ + + + FF + ++ Sbjct: 346 LVAGAIVCAILFTVLAVICPIAMIIVCNVVIGFLLCSVFYFGFFGNMFTHPYLVTALLIS 405 Query: 309 NIFTGL----IKAPFM--ACAIGIVAMKEGFAVGVHSN 340 + G IK G + G + Sbjct: 406 STLVGFLLSSIKMFLFANGFLFGAAGLFYGVNAVFSAR 443 >gi|260435714|ref|ZP_05789684.1| anti-anti-sigma regulatory factor, spoiiaa [Synechococcus sp. WH 8109] gi|260413588|gb|EEX06884.1| anti-anti-sigma regulatory factor, spoiiaa [Synechococcus sp. WH 8109] Length = 131 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 6/69 (8%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSA--IVDLSAITEIDTIGAELIMYF 61 +G VF F G + + + ++++ ++DLS I +D+ G ++ Sbjct: 29 DGCLVFHFTGQLDAYS----EKQFMEYVGDVLKANKLPSVLDLSKIDFLDSSGLGALVQL 84 Query: 62 MEKYHGKIK 70 ++ + Sbjct: 85 AKQCTDAKR 93 >gi|4336802|gb|AAD17961.1| toluene tolerance protein Ttg2E [Pseudomonas putida] Length = 100 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 6/91 (6%) Query: 1 MSENGIT-----VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55 MSE G++ V R AG + A+ + + ++D SA+ ++G Sbjct: 1 MSEAGVSMAEPGVLRLAGVLDYRS-GPVLRKQGKALIAACREAQLVLDCSAVQRSTSVGL 59 Query: 56 ELIMYFMEKYHGKIKLQGVSTHIEQLFSLIS 86 L++ FM K V + + + + Sbjct: 60 SLLLAFMRDAQAAGKGCQVRSMPDDMREIAE 90 >gi|284008695|emb|CBA75358.1| anti-sigma factor antagonist [Arsenophonus nasoniae] Length = 91 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 7/86 (8%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G + + ++++S ++ ID+ G + + Sbjct: 5 QQNGQTLILTGELDRDTLPAFWQQRQQLLK-----GINVINVSQLSHIDSTGLAMFVRLK 59 Query: 63 --EKYHGKIKLQGVSTHIEQLFSLIS 86 ++ K L+G+S + L L Sbjct: 60 SEQQSGNKWVLEGISERFKTLIRLYK 85 >gi|315501610|ref|YP_004080497.1| anti-sigma-factor antagonist [Micromonospora sp. L5] gi|315408229|gb|ADU06346.1| anti-sigma-factor antagonist [Micromonospora sp. L5] Length = 117 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 TV AG+ ++ D + + +VDL+ + +D+ G ++ + Sbjct: 14 GTVIEVAGDLDMSTTPQLRDRLYELTEA--GARVVVVDLAGVGFMDSSGLGALVVGYKSL 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + G + L GV + ++FS+ S + Sbjct: 72 RERDGWLGLAGVRASVRRVFSITSVDRVIPL 102 >gi|284988739|ref|YP_003407293.1| multi-sensor signal transduction histidine kinase [Geodermatophilus obscurus DSM 43160] gi|284061984|gb|ADB72922.1| multi-sensor signal transduction histidine kinase [Geodermatophilus obscurus DSM 43160] Length = 1711 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 9/102 (8%), Positives = 29/102 (28%), Gaps = 3/102 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E G G + ++ + + A +DL + + G L++ Sbjct: 1610 EPGGPRLEVHGEVDLATAGRVRRQLLTRLEQLAPGSVATLDLGPTGYLASAGVGLVLEAV 1669 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + ++++Q ++ ++ + Sbjct: 1670 ARARRAGVELRVQTRPGTPPARILALAGVGEPAVEAPTAPLA 1711 >gi|149909631|ref|ZP_01898284.1| possible anti-sigma factor antagonist [Moritella sp. PE36] gi|149807335|gb|EDM67288.1| possible anti-sigma factor antagonist [Moritella sp. PE36] Length = 111 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NGI + + A + + + + + +++ +++ I+D + +T ID+ G I++ + Sbjct: 8 NGIIILKIATDLDTENVVSLQPRLEALVDEH--AENIILDFTNVTFIDSTGIGAIVFLFK 65 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + + L VS +L +++ + Sbjct: 66 RLTSQRRTLSLLKVSGQPYKLMTMLRVENAIPF 98 >gi|149181666|ref|ZP_01860159.1| anti-sigma F factor antagonist [Bacillus sp. SG-1] gi|148850644|gb|EDL64801.1| anti-sigma F factor antagonist [Bacillus sp. SG-1] Length = 116 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + + R +G ++ I + +++L A+ +D+ G +I+ Sbjct: 11 SDVLCIRLSGELDHHTAEQLRQQASQLIEEY-GIKHIVLNLEALGFMDSSGLGVILGRYK 69 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +++ HG++ + +S +++LF + +++ + Sbjct: 70 QIKQKHGEMVVCAISPAVKRLFEMSGLFKIIRLEPSEE 107 >gi|218133793|ref|ZP_03462597.1| hypothetical protein BACPEC_01682 [Bacteroides pectinophilus ATCC 43243] gi|217991168|gb|EEC57174.1| hypothetical protein BACPEC_01682 [Bacteroides pectinophilus ATCC 43243] Length = 123 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V + +++ +V+ + + S I D S +T +D+ G LIM +K Sbjct: 5 GSLVIGLNTDLD-HHLADEIREVIDEVVEERGIRSIIFDFSKVTFMDSSGIGLIMGRYKK 63 Query: 65 YHGKIKLQGVST 76 H ++ VS Sbjct: 64 MHRTGRIAIVSP 75 >gi|29827470|ref|NP_822104.1| hypothetical protein SAV_929 [Streptomyces avermitilis MA-4680] gi|29604569|dbj|BAC68639.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 1198 Score = 38.8 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 30/125 (24%), Gaps = 6/125 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ G TV R + S + D++ + + +DL ID A + Sbjct: 656 SQTGATVLRGRSSLVSAPSRALGDEISRFLAEED-----RLDLRGEGRIDDALASRLRRL 710 Query: 62 MEKYH-GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 + G E++ P + + Sbjct: 711 SADQGVPDLVSAGFDGLRERMLGFTDDVALTPGVPPAPTEPPDLLRAGFARLRQLRVVDA 770 Query: 121 FINDS 125 F Sbjct: 771 FGRTV 775 >gi|257094987|ref|YP_003168628.1| anti-sigma-factor antagonist [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047511|gb|ACV36699.1| anti-sigma-factor antagonist [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 101 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Query: 19 EISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---YHGKIKLQGVS 75 I + + +D +DLS + E+DT G +L+M + ++ + G S Sbjct: 16 TIYQAQAQKEQLLAALAAADHLELDLSGVAEMDTAGLQLLMLLKREVLQQGKRLTISGHS 75 Query: 76 THIEQLFSLISFT 88 ++Q+ + Sbjct: 76 PAVQQILDFCNLV 88 >gi|239787369|emb|CAX83845.1| Anti-sigma factor antagonist [uncultured bacterium] Length = 108 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 6/90 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G V G + + + +VD+S ++ ID+ G ++ Sbjct: 8 DRGFLVMTLDGEADLQHTPTLRKML---LESVSGGKPVVVDMSNVSYIDSSGVASLVEAY 64 Query: 63 EKYHGKI---KLQGVSTHIEQLFSLISFTH 89 + K L G+S ++ L Sbjct: 65 QSARKKGFSFALAGLSPAALRVLQLARLDR 94 >gi|194016719|ref|ZP_03055332.1| anti-sigma F factor antagonist [Bacillus pumilus ATCC 7061] gi|194011325|gb|EDW20894.1| anti-sigma F factor antagonist [Bacillus pumilus ATCC 7061] Length = 147 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 38/96 (39%), Gaps = 4/96 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V + +++L+ +T +D+ G +I+ + Sbjct: 43 VLCIRLTGELDHHSAETLRQKVTNYLETE-DIRHIVLNLADLTFMDSSGLGVILGRYKEI 101 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 ++ G++ + +S + +LF + +++ + Sbjct: 102 KQLGGEMVVCAISPAVNRLFDMSGLFKIIRMEPSEQ 137 >gi|258621334|ref|ZP_05716368.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM573] gi|258625024|ref|ZP_05719946.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM603] gi|262166025|ref|ZP_06033762.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM223] gi|262171114|ref|ZP_06038792.1| anti-anti-sigma regulatory factor [Vibrio mimicus MB-451] gi|258582692|gb|EEW07519.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM603] gi|258586722|gb|EEW11437.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM573] gi|261892190|gb|EEY38176.1| anti-anti-sigma regulatory factor [Vibrio mimicus MB-451] gi|262025741|gb|EEY44409.1| anti-anti-sigma regulatory factor [Vibrio mimicus VM223] Length = 106 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 4/83 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY- 65 R GN + + + I K +D +T +D+ G ++Y ++ Sbjct: 13 VTLRIEGNLDAEGSRFLQPIIDDVIWKD-AHQEVELDFRNVTFLDSSGVGALVYLYKRLV 71 Query: 66 --HGKIKLQGVSTHIEQLFSLIS 86 K++++ + ++ L+ Sbjct: 72 ESERKMRIENATGQPLEIIKLLR 94 >gi|239943395|ref|ZP_04695332.1| putative anti-sigma factor antagonist [Streptomyces roseosporus NRRL 15998] gi|239989848|ref|ZP_04710512.1| putative anti-sigma factor antagonist [Streptomyces roseosporus NRRL 11379] gi|291446864|ref|ZP_06586254.1| anti-sigma factor antagonist [Streptomyces roseosporus NRRL 15998] gi|291349811|gb|EFE76715.1| anti-sigma factor antagonist [Streptomyces roseosporus NRRL 15998] Length = 124 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + V R +G + V A+ + ++DLS + D+ G +++ Sbjct: 10 QGSWAVLRISGELDLVTSPVVRQSVHDAVAE--GRHDVVLDLSEVFFCDSSGVGVLIASR 67 Query: 60 YFMEKYHGKIKLQ 72 M+ G+++L Sbjct: 68 RLMKSCGGRLRLI 80 >gi|254489687|ref|ZP_05102883.1| STAS domain, putative [Methylophaga thiooxidans DMS010] gi|224465096|gb|EEF81349.1| STAS domain, putative [Methylophaga thiooxydans DMS010] Length = 101 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 3/86 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +FR +G S + + + +DL+ ++ D+ L++ +M Sbjct: 10 DKDAQLFRVSGELTLDSASAVMAETETLFD---TKSELDIDLAGVSRADSASLALLITWM 66 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + K Q+ ++ + Sbjct: 67 RQAKQSDKTISFRNLPNQMRAIAGAS 92 >gi|119717160|ref|YP_924125.1| sulphate transporter [Nocardioides sp. JS614] gi|119537821|gb|ABL82438.1| sulphate transporter [Nocardioides sp. JS614] Length = 508 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 3/86 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ R G + + I + D ++ L I +D GA ++ + Sbjct: 410 EDATLHLRPTGVLYFGSAPALERSISRLIAEHPSVDRVVLHLDRIGRLDLTGALMLRDIL 469 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLI 85 E +++G H L + Sbjct: 470 ADAESAGRTFEIRGARAHAAGLLVRL 495 >gi|15599648|ref|NP_253142.1| hypothetical protein PA4452 [Pseudomonas aeruginosa PAO1] gi|9950687|gb|AAG07840.1|AE004859_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 102 Score = 38.8 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E + AG + + I S Q+ +VD SA+ ++G L++ Sbjct: 6 LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 F+ K+ V + + + Sbjct: 65 FIRDARKAGKVLSVRALPDDMREIAK 90 >gi|261211078|ref|ZP_05925367.1| putative anti-sigma B factor antagonist [Vibrio sp. RC341] gi|260839579|gb|EEX66190.1| putative anti-sigma B factor antagonist [Vibrio sp. RC341] Length = 109 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 3/97 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 F G + E+ + Q + L + ID+ G L+++ +E + Sbjct: 14 FSLIGELDRETVPELWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHLIEHAKVR 70 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +S EQL +L ++ + + +Q + N Sbjct: 71 NCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107 >gi|253991142|ref|YP_003042498.1| hypothetical protein PAU_03668 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782592|emb|CAQ85756.1| conserved hypothetical Protein [Photorhabdus asymbiotica] Length = 97 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 8/88 (9%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 E G + + + +++S + +D+ G L++ F Sbjct: 8 EKAGQTLILRGILDRDSLLPLWQQKEKLLTNIND-----INVSQLEHVDSTGLALLVRFK 62 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSLISF 87 M+K ++ GVS + L L Sbjct: 63 YHMQKEGVELLFSGVSERLSTLIMLYDL 90 >gi|229521582|ref|ZP_04411000.1| hypothetical protein VIF_002118 [Vibrio cholerae TM 11079-80] gi|229341176|gb|EEO06180.1| hypothetical protein VIF_002118 [Vibrio cholerae TM 11079-80] Length = 109 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 3/99 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 F G + ++ + Q + L + ID+ G L+++ +E Sbjct: 12 HQFSLIGELDRETVPKLWIFLKNW---QPQVKQIELSLQQVVRIDSAGMVLLIHLIEHAK 68 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + +S EQL +L ++ + + +Q + N Sbjct: 69 VRNCHIMLSFVPEQLRTLFQLSNIEHLMSQHIAKPAEVN 107 >gi|224825147|ref|ZP_03698253.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002] gi|224602818|gb|EEG08995.1| anti-sigma-factor antagonist [Lutiella nitroferrum 2002] Length = 105 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 3/97 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + + ++ A+ D +DLSA+ EIDT G +L++ + + Sbjct: 12 LTLLDDMTIYNATAQKQLLLDALQA---GDGLELDLSAVAEIDTAGFQLLLLAKREARHQ 68 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 K + H + ++ F + + Sbjct: 69 DKPLLIVAHSPAVREVVDFFNVAADFGDPMLIPARES 105 >gi|297157174|gb|ADI06886.1| putative anti-sigma factor antagonist [Streptomyces bingchenggensis BCW-1] Length = 107 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A+ ++DL+ + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTALHTALES--GGGDLVLDLTELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+GV +++L Sbjct: 62 RKAGRAGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|302390087|ref|YP_003825908.1| anti-anti-sigma factor [Thermosediminibacter oceani DSM 16646] gi|302200715|gb|ADL08285.1| anti-anti-sigma factor [Thermosediminibacter oceani DSM 16646] Length = 103 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 8/97 (8%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME- 63 G+ + G + ++ ++ +DL + ID+ GA +++ Sbjct: 10 GMAILEVEGELDFSNVDQLQQEIQRR-----PEGVVEIDLQGLRFIDSSGAGMLLNQARH 64 Query: 64 --KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 +K+ + I + +I F + P Sbjct: 65 FFSKGRTLKIVNIPDLIREDLEVIGFFQVMEALKANP 101 >gi|126347733|emb|CAJ89450.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 119 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 3/106 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V +G + V A ++DLSA+T D+ G +++ + Sbjct: 17 SGTFVLEVSGELDHHTAQLLTHAVNDA---PFDDGGVVIDLSALTYCDSTGITVLIGAYQ 73 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + ++ + + ++ P + + Sbjct: 74 RSQATGSPLSLAGVNPDQMRVFTVVGLDQVFTFHPTTAAAIAALGR 119 >gi|256396294|ref|YP_003117858.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256362520|gb|ACU76017.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 115 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 3/89 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 V AG+ DV + S ++D S IT +D++G ++++ M++ Sbjct: 12 DRVVLTVAGDVDLAVHGRFEADVEQYWDAST---DLVIDCSRITFLDSMGLRVLVHAMQR 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 G + ++ + + ++ + + Sbjct: 69 AAGNGRDIAIAAPSDPVLRVLDLAGIRSL 97 >gi|205372254|ref|ZP_03225068.1| anti-anti-sigma factor (RsbW antagonist) [Bacillus coahuilensis m4-4] Length = 111 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 +G + ++ +++ + +DLS +T +D+ G + + +K Sbjct: 17 VSISGEIDAYTAPKLRENLDEIAGQEGIH--LTIDLSDVTYMDSTGLGVFVGMFKKMNAT 74 Query: 66 HGKIKLQGVSTHIEQLFSLISFTH 89 +G +KL +S + +LF + Sbjct: 75 NGHLKLVSLSERLRRLFEITGLAD 98 >gi|217077881|ref|YP_002335599.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B] gi|217037736|gb|ACJ76258.1| anti-sigma factor antagonist [Thermosipho africanus TCF52B] Length = 110 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 T+ + G+ + +++ D+ + + + ++DLS + ID+ G ++ ++ Sbjct: 15 TIAKVTGDIDAYHSADVKKDIREKMLATEKGK-FVIDLSEVNYIDSAGLGSLVAILKDAR 73 Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89 K + + + + + T Sbjct: 74 LNNKELALLSPKQSVMRVFEMTR 96 >gi|172035386|ref|YP_001801887.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142] gi|171696840|gb|ACB49821.1| hypothetical protein cce_0470 [Cyanothece sp. ATCC 51142] Length = 117 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 4/103 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + V G + I + + + + + D VD+ + ID+ G I+ Sbjct: 11 VAVLEPTGYITAANIDDFQEKLTNFVRNNPSRDYL-VDMHQVEFIDSAGLMAIVSAFRLA 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 ++ + K+ + +S + +F L +I + +N Sbjct: 70 QRLNKKLSVCSLSPSVRIIFELTQLDRALEIYESRQTYEASFN 112 >gi|78046160|ref|YP_362335.1| anti-sigma factor antagonist [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034590|emb|CAJ22235.1| Anti-sigma factor antagonist [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 139 Score = 38.8 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + ++ + + I + ++DLSA+ I + G I Sbjct: 12 QDTRQRVILTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + + + Sbjct: 70 KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119 >gi|148554411|ref|YP_001261993.1| anti-sigma-factor antagonist [Sphingomonas wittichii RW1] gi|148499601|gb|ABQ67855.1| anti-sigma-factor antagonist [Sphingomonas wittichii RW1] Length = 134 Score = 38.8 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 S +G V AG S E+ + + + +VDLS + + + G +++ Sbjct: 31 SRDGTLVISAAGRIDSTTAGELEAVLPARVR---DHGAVVVDLSGVPYVSSAGLRVLLIG 87 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSL 84 + ++ + GV+ + ++F + Sbjct: 88 AKGAKAAGHRLVITGVAPAVREVFDI 113 >gi|330446815|ref|ZP_08310466.1| NTP-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491006|dbj|GAA04963.1| NTP-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 105 Score = 38.8 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 3/89 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G + +G + + + S+ +DL ++ +D+ G ++++ ++ Sbjct: 14 GNDQYCLSGCLERDTVPAFW---LRRKEWMPDSNKVSLDLGGLSRVDSAGMVMLLHLHQQ 70 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + EQL +L+ +H + I Sbjct: 71 LSSAGCDFTLLNVPEQLKTLLRLSHVEPI 99 >gi|308067317|ref|YP_003868922.1| hypothetical protein PPE_00530 [Paenibacillus polymyxa E681] gi|305856596|gb|ADM68384.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 132 Score = 38.8 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++GI +FR G + + + + I++ + DL + ID+ G +++ F Sbjct: 18 QDGIQIFRLTG---TVGYGNVQQAKTVLREQQIKARYYVFDLLELAWIDSTGLGMLISFA 74 Query: 63 EKYH--GKIKLQGVSTHIEQLFSLISF 87 ++ V + +L + Sbjct: 75 KEVRTDRPNVAIVVGGELRELLEMAKL 101 >gi|296166400|ref|ZP_06848833.1| anti-sigma-factor antagonist [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898245|gb|EFG77818.1| anti-sigma-factor antagonist [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 106 Score = 38.8 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 20/56 (35%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 ++G + AG I + A ++ VDLS + +D+ + Sbjct: 14 DDGELMLVAAGEIDLSNIDHFVQALTSASGEATGGGPLTVDLSEVEYLDSAAINAL 69 >gi|254381530|ref|ZP_04996894.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194340439|gb|EDX21405.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 146 Score = 38.8 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 11/108 (10%), Positives = 31/108 (28%), Gaps = 3/108 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G G V + S +D + ID++G +++ Sbjct: 9 TEEGALHLEVHGFLDFDSSEGFLTAVTGHLTDIPGLRSLHLDCGDLAGIDSMGLAMLLML 68 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + H + L+ ++++ ++ ++ Sbjct: 69 HRRTTAAHVTLLLEARPPALDRMLTITGAMDHLVPRSSGETGGHAEPP 116 >gi|168703771|ref|ZP_02736048.1| hypothetical protein GobsU_29828 [Gemmata obscuriglobus UQM 2246] Length = 104 Score = 38.8 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 25/92 (27%), Gaps = 6/92 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G AG + + + + + V + +DT ++++ + Sbjct: 16 GWARLVLAGRVTVTDAHPLHAAAREILAR---GANVAVRCEGVEHLDTAAIQVLLSLSRE 72 Query: 65 YHGKIKLQ---GVSTHIEQLFSLISFTHRKKI 93 + GV I + L + Sbjct: 73 VRRAGRQLVVGGVPGPIAEYLRLAGLAGQPAA 104 >gi|330465248|ref|YP_004402991.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032] gi|328808219|gb|AEB42391.1| anti-sigma-factor antagonist [Verrucosispora maris AB-18-032] Length = 113 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 2/95 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G + + ++ I+ + +VDL + +D+ G +++ ++ Sbjct: 11 GEHTVLEVGGEVDVYTAPRLRERLLELIDS--GARHVVVDLGRVDFLDSTGLGVLVGALK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + E L + T ++ P Sbjct: 69 RLRTADGTFSLVCDKEPLLKIFRITALDQVFPLHP 103 >gi|307544523|ref|YP_003897002.1| anti-sigma-factor antagonist (STAS) domain protein [Halomonas elongata DSM 2581] gi|307216547|emb|CBV41817.1| anti-sigma-factor antagonist (STAS) domain protein [Halomonas elongata DSM 2581] Length = 114 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 7/82 (8%), Positives = 23/82 (28%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G+ S +A+ + + + D+S + + + +++ ++ + Sbjct: 18 TLTVVGSADFEGASALAEAGRRWLEGRGRGERVTFDMSGVDRVSSAAVSVLLEWLRQARR 77 Query: 68 KIKLQGVSTHIEQLFSLISFTH 89 L L Sbjct: 78 TGLEVAEVRLSAPLARLTDVAD 99 >gi|256833625|ref|YP_003162352.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603] gi|256687156|gb|ACV10049.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603] Length = 111 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 27/81 (33%), Gaps = 2/81 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T +G+ + + S++ +D+ + +D+ GA ++ E Sbjct: 10 ATTVVISGDLDLASRDQFLEVAARL--TSLRRSLLTIDMCDVRFMDSTGAAFLISLAETG 67 Query: 66 HGKIKLQGVSTHIEQLFSLIS 86 + L + + ++ Sbjct: 68 QRRGWLTVLRGSSDAHRFVLD 88 >gi|49075448|gb|AAT49473.1| PA4452 [synthetic construct] Length = 103 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E + AG + + I S Q+ +VD SA+ ++G L++ Sbjct: 6 LREGAAGELQLAGVLDYSSGPALREQGGRLIRAS-QAAELVVDCSAVERSSSVGISLLLA 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 F+ K+ V + + + Sbjct: 65 FIRDARKAGKVLSVRALPDDMREIAK 90 >gi|271968054|ref|YP_003342250.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270511229|gb|ACZ89507.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 150 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 4/117 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 V R G + + + I IVDL+ +T D++G ++ + Sbjct: 18 RENAAVIRVGGELGFHSAPLLREQLRR-IWDGPDRPFLIVDLTEVTFCDSVGLSELVSAL 76 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGK 116 E + L GV + ++ ++ +I + G+ Sbjct: 77 QHSEATGTRFVLAGVHGPLARVLTITGLRKAFEIHPSSDDALRQAAEARPDLPADGR 133 >gi|118462796|ref|YP_879719.1| anti-anti-sigma factor [Mycobacterium avium 104] gi|254773441|ref|ZP_05214957.1| hypothetical protein MaviaA2_02016 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164083|gb|ABK64980.1| anti-anti-sigma factor [Mycobacterium avium 104] Length = 113 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G++V +G + + + S + ++DLSA+ + ++G +++ E Sbjct: 6 DGVSVVSVSGEIDLVTAPALEQAIGAVVADSPPA--LVIDLSAVEFLGSVGLKILAATYE 63 Query: 64 KYHGK 68 K + Sbjct: 64 KLGKE 68 >gi|293391908|ref|ZP_06636242.1| anti-sigma factor B antagonist [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952442|gb|EFE02561.1| anti-sigma factor B antagonist [Aggregatibacter actinomycetemcomitans D7S-1] Length = 89 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%) Query: 22 EIADDVVM-AINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + + ++ DLS + ID+ G L+ F+ Sbjct: 3 PLWQQRASFLLARKTETLDVHWDLSQVNRIDSAGFALLCDFLR 45 >gi|284044887|ref|YP_003395227.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283949108|gb|ADB51852.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 114 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 32/94 (34%), Gaps = 7/94 (7%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---M 59 V +G + + A+ + ++DL ++ +D+ G L+ Sbjct: 17 RGETLVATPSGELDVATVP----QLAAALREHDGFARLLIDLRPLSFMDSSGLRLLVAEH 72 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ ++ L +++L + R + Sbjct: 73 DRAQRGGYELALVRGGAEVDRLLRVTRLDERLPL 106 >gi|258652298|ref|YP_003201454.1| PAS/PAC sensor protein [Nakamurella multipartita DSM 44233] gi|258555523|gb|ACV78465.1| putative PAS/PAC sensor protein [Nakamurella multipartita DSM 44233] Length = 666 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 G V +G+ + + +V+ A +DL+A+T + + G +++ Sbjct: 563 GARVITVSGSVDLASVPVLRQEVLRA--GRGGELPVTIDLTAVTHLSSAGVQMLHTL 617 >gi|150021496|ref|YP_001306850.1| anti-sigma-factor antagonist [Thermosipho melanesiensis BI429] gi|149794017|gb|ABR31465.1| anti-sigma-factor antagonist [Thermosipho melanesiensis BI429] Length = 110 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +++ + + +G+ + ++I ++ + S + + I+DLS + ID+ G ++ Sbjct: 9 INDEKYLIAKVSGDIDAYHSADIKKEIRENMISSDK-EKVIIDLSEVNYIDSAGLGSLVA 67 Query: 61 FMEKYH 66 ++ Sbjct: 68 ILKDAR 73 >gi|28211849|ref|NP_782793.1| anti-sigma F factor antagonist [Clostridium tetani E88] gi|28204291|gb|AAO36730.1| anti-sigma F factor antagonist [Clostridium tetani E88] Length = 116 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + + G E+ + +++ + I+D S +T +D+ G +++ + Sbjct: 14 DDKLITQITGELDHHSAEEVRSKIDDRLSRD-NINKLIMDFSGVTFMDSSGIGVVIGRFK 72 Query: 64 KY---HGKIKLQGVSTHIEQLFSL 84 K G + L V+ +I+++F L Sbjct: 73 KLSYEDGVVCLINVNENIKRVFEL 96 >gi|294624413|ref|ZP_06703103.1| anti-sigma factor antagonist [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663975|ref|ZP_06729394.1| Anti-sigma factor antagonist [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601283|gb|EFF45330.1| anti-sigma factor antagonist [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606258|gb|EFF49490.1| Anti-sigma factor antagonist [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 139 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + ++ + + I + ++DLSA+ I + G I Sbjct: 12 QDTRQRVILTGRLDTHTYQDLDAALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + + + Sbjct: 70 KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119 >gi|302521364|ref|ZP_07273706.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] gi|302430259|gb|EFL02075.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] Length = 122 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 30/100 (30%), Gaps = 2/100 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V AG + + + ++ D ++D S + D+ G +++ + Sbjct: 25 VVVALAGELDHHTAELLREPLDSKLDA--GRDRIVLDCSELEFCDSTGLNVLLGARLRAE 82 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ + + T + P + + Sbjct: 83 AAGGGIHLAAMQPVVSRVFEITGADAVFQVHPTLADALSG 122 >gi|256828162|ref|YP_003156890.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM 4028] gi|256577338|gb|ACU88474.1| anti-sigma-factor antagonist [Desulfomicrobium baculatum DSM 4028] Length = 117 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 5/82 (6%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 TVFR G + +E+ V++ +++ + I+D S + I++ G +++ ++ Sbjct: 11 ATVFRIKGRLDATSTTELEQKVLLRLDRGVTH--LIMDFSELEYINSAGLRILVMSYQRL 68 Query: 66 HGKIKLQ---GVSTHIEQLFSL 84 H + GV +I ++F + Sbjct: 69 HSRGGQVMVCGVRDYIAEIFEI 90 >gi|218885356|ref|YP_002434677.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756310|gb|ACL07209.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 114 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 I V G +++ ++ + SD ++DL A++ +D+ G ++ Sbjct: 10 GNILVAALTGELTLANATDVRSELERLFARKGVSD-VVLDLGAVSFMDSSGLGTLVAAST 68 Query: 64 KYH 66 K Sbjct: 69 KAR 71 >gi|198282481|ref|YP_002218802.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247002|gb|ACH82595.1| hypothetical protein Lferr_0341 [Acidithiobacillus ferrooxidans ATCC 53993] Length = 105 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G G+W+ ++++ + D + ++ + D+ +++ + + Sbjct: 13 DGAGWLFLRGDWR---VAQLDKALQFFSWAKDGRDCTEISVAELDAADSATLAVLLEWTQ 69 Query: 64 KYHGKIKLQGVSTHIEQLFSLISF 87 + G+ + +L L S Sbjct: 70 QAAGRGVPLRIHGASPKLRELASL 93 >gi|158317920|ref|YP_001510428.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec] gi|158113325|gb|ABW15522.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec] Length = 166 Score = 38.4 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 V G + + + ++ A + +VDL ++ +D+ G +I+Y ++ Sbjct: 46 DAVVVHPVGEIDYSSLEPLREALLDA--RIAGVREIVVDLEQVSFLDSQGLAVILYAHQR 103 Query: 65 ---YHGKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 G++ L+ ++ + +L + + T + + Sbjct: 104 QRSAGGRLILRNLNENTYRLLDVTNLTTVIDVDH 137 >gi|317152275|ref|YP_004120323.1| anti-anti-sigma factor [Desulfovibrio aespoeensis Aspo-2] gi|316942526|gb|ADU61577.1| anti-anti-sigma factor [Desulfovibrio aespoeensis Aspo-2] Length = 110 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 EN I + GN + + + V+ + + D S + I++ G +++ Sbjct: 8 ENEIIILTVNGNLDAEGTQAMEEKVLALLEA--GEKCLLFDFSELDYINSSGLRILVLAY 65 Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84 ++ G++ + GV +I+++F + Sbjct: 66 QRLKKSSGRVAICGVKDYIQEVFEV 90 >gi|294628014|ref|ZP_06706574.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292831347|gb|EFF89696.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 123 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 32/108 (29%), Gaps = 2/108 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G TV +G+ + + + ++DL + ID G L+ Sbjct: 16 TAGGTTVVTLSGDVGFATRLCLGGRLDAL--SAGPRPDLVLDLRHVPFIDCAGLGLLCRV 73 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + + + + ++ T + P+ + F Sbjct: 74 RNRVTARGGRLRLVSDSASFRRILRRTGLAGVFLVLPEFTAFPRPPGA 121 >gi|229543945|ref|ZP_04433004.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1] gi|3287912|sp|P70877|SP2AA_BACCO RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein AA gi|1552542|emb|CAA90872.1| SpoIIAA [Bacillus coagulans] gi|229325084|gb|EEN90760.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1] Length = 116 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 41/104 (39%), Gaps = 4/104 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 + R G + V AI ++ +++L ++ +D+ G +I+ Sbjct: 12 DVLCIRLQGELDHHTAESLRASVTKAIEEN-GIRHLVLNLEQLSFMDSSGLGVILGRYKQ 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 +++ +G++ + +S +++LF L ++ + Sbjct: 71 IKQKNGEMIVCAISPAVKRLFELSGLFKIIRLDESEQYALHRLG 114 >gi|23014474|ref|ZP_00054288.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum magnetotacticum MS-1] Length = 103 Score = 38.4 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Query: 1 MSENG-ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S NG + + +G++ E V ++ + S VDL+ I +D+ +++ Sbjct: 7 LSRNGNVLTIKLSGDFSFSENMAFRTVVDAVVSS--GASSVEVDLTGIGSLDSAALSMLI 64 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 E+ + Q+ ++ Sbjct: 65 LLRERLAKAGGTLTLVKPPPQVDRILEVVD 94 >gi|325675198|ref|ZP_08154883.1| anti-sigma-B factor antagonist [Rhodococcus equi ATCC 33707] gi|325553904|gb|EGD23581.1| anti-sigma-B factor antagonist [Rhodococcus equi ATCC 33707] Length = 112 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ G+ V G + + + + S +VDL ID+ G ++ Sbjct: 9 TDAGVVVISPQGRLNMTAAPILREQLRELVEA--GSTRLVVDLGRTDFIDSSGLGALISG 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ ++ Q+ +++ T Sbjct: 67 LKTARQAGGDLRIAAPTAQIETVLELT 93 >gi|297563077|ref|YP_003682051.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847525|gb|ADH69545.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 122 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 4/103 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GITV G E + A +VDLSA+ ID G ++ + Sbjct: 14 DGITVVELGGEIDIATAEEAFTRITAAAA----DGCVVVDLSAVEFIDASGVNALVRALR 69 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 G ++ QL ++ + P S ++ Sbjct: 70 FATGARHHLLLACPPRQLTRILDVLALGAVLPTHPDVSAARSA 112 >gi|183221127|ref|YP_001839123.1| putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911218|ref|YP_001962773.1| anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775894|gb|ABZ94195.1| Anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779549|gb|ABZ97847.1| Putative anti-sigma factor antagonist [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 107 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G+ + ++ I+ ++S +D+ I +D+ G L+ +K Sbjct: 12 TVVTLEGSLDIYSAPALKKELHKIIDD--GAESVAIDMINIKLLDSSGIALLANLQKKLK 69 Query: 67 GK 68 + Sbjct: 70 SE 71 >gi|54022119|ref|YP_116361.1| putative anti-anti-sigma factor [Nocardia farcinica IFM 10152] gi|54013627|dbj|BAD54997.1| putative anti-anti-sigma factor [Nocardia farcinica IFM 10152] Length = 121 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 SENG + G ++ + A + +VD+S + + + G ++ Sbjct: 16 SENGTEIVTVHGEVDMASAPQLQAALEDA---QRGGNPLVVDMSDVGFLGSAGLSALLVV 72 Query: 62 MEKYHGKIKLQGVSTHIEQ 80 E + S + + Sbjct: 73 SEAAQPQRLRVVASDAVRR 91 >gi|157830098|pdb|1AUZ|A Chain A, Solution Structure Of Spoiiaa, A Phosphorylatable Component Of The System That Regulates Transcription Factor Sigma-F Of Bacillus Subtilis, Nmr, 24 Structures gi|157830475|pdb|1BUZ|A Chain A, Solution Structure Of Spoiiaa, A Phosphorylatable Component Of The System That Regulates Transcription Factor Sigma-F Of Bacillus Subtilis Nmr, Minimized Average Structure Length = 116 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V ++ K +++L ++ +D+ G +I+ + Sbjct: 12 VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 70 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + + + + Q Sbjct: 71 KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 107 >gi|300311317|ref|YP_003775409.1| UDP-N-acetyl-d-mannosaminuronic acid transferase [Herbaspirillum seropedicae SmR1] gi|300074102|gb|ADJ63501.1| UDP-N-acetyl-d-mannosaminuronic acid transferase protein [Herbaspirillum seropedicae SmR1] Length = 357 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 26/86 (30%), Gaps = 3/86 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G F+G ++ + + A ++D + + ID+ +M Sbjct: 265 DGGDCELLFSGALGQANLARLRPVLAQAAQGDAP---LVLDCTRLQYIDSAALAQLMLLY 321 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + + + L I+ Sbjct: 322 GDCVRRGRPWAIINASASLRRQITLH 347 >gi|239928871|ref|ZP_04685824.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291437198|ref|ZP_06576588.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291340093|gb|EFE67049.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] Length = 107 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTVLHSAVDD--GAGDLVLDLSELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+GV +++L Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|238064436|ref|ZP_04609145.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149] gi|237886247|gb|EEP75075.1| hypothetical protein MCAG_05402 [Micromonospora sp. ATCC 39149] Length = 115 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 2/100 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 R AG + E+ + + +VDL+ +T D+ G + + Sbjct: 14 GACLRLAGELDTSTAPELNAVLDRLTKR--GERHLLVDLAELTFCDSTGIAAFVRGDNQA 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + V+ ++ ++ T ++ +P + + Sbjct: 72 AARGGWLRVTGATGRVERVLRLTGLAEVLGYQPDTAHPTS 111 >gi|260574473|ref|ZP_05842477.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2] gi|259023369|gb|EEW26661.1| anti-sigma-factor antagonist [Rhodobacter sp. SW2] Length = 115 Score = 38.4 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 3/103 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + G+ + I M + ++DLS ++ +D+ G ++ M Sbjct: 8 RGDLLIVTAMGD-RIDAAGAIQFKDRMREITEAPTRRVLLDLSRVSFLDSSGLGAVVAVM 66 Query: 63 EKYH--GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFF 103 + K++L G++ ++++F L I P R Sbjct: 67 KALGPDRKLELAGLTPTVQKVFRLTRMDSVFTIHPAVPDRGQP 109 >gi|318059162|ref|ZP_07977885.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actG] gi|318077512|ref|ZP_07984844.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actF] Length = 125 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R AG + + +++ A + I+DLS + D+ L++ + Sbjct: 34 LVRAAGELDLDTVGALREELEEAAARYP---VVILDLSRVDFGDSSFLNLLIRV--RATT 88 Query: 68 KIKLQGVSTHIEQLFSL 84 +++L + + QLF+L Sbjct: 89 RLRLVAPTEPLRQLFAL 105 >gi|312881101|ref|ZP_07740901.1| anti-sigma-factor antagonist [Aminomonas paucivorans DSM 12260] gi|310784392|gb|EFQ24790.1| anti-sigma-factor antagonist [Aminomonas paucivorans DSM 12260] Length = 111 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 34/92 (36%), Gaps = 5/92 (5%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY---H 66 R G + + + V ++ + +D + + + G + + +++ Sbjct: 17 RLQGRLDTATAPALEEQVSRWLD--GGARDLELDCRDLEYVSSAGLRVFLGAVKRLKPQG 74 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 G++ L G + ++ L F ++K P Sbjct: 75 GRLVLVGTRGVVREVLDLAGFGALVELKEDGP 106 >gi|307153376|ref|YP_003888760.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] gi|306983604|gb|ADN15485.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] Length = 107 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 40/95 (42%), Gaps = 5/95 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEK 64 V + +G + + + ++ + + I D ++D +T +D+ G + + Sbjct: 7 VVKPSGILDATQAPDFRQEISQLVKEKI--DIIVIDFRDVTFMDSSGLGALVLSLRTAHS 64 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 K+ L ++ I+ LF L S +I + + + Sbjct: 65 AGSKLFLCSINEQIQMLFKLTSMDRVFEIFSSREE 99 >gi|284990742|ref|YP_003409296.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM 43160] gi|284063987|gb|ADB74925.1| hypothetical protein Gobs_2242 [Geodermatophilus obscurus DSM 43160] Length = 116 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 31/86 (36%), Gaps = 6/86 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ V G+ P + ++ + + + V ++++ ID+ G L++ + Sbjct: 23 EDAGPVLHLLGDVDGPLVGQLRAE------GVDERELVAVHVASVGYIDSAGLSLLVRWA 76 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 + + + + ++ Sbjct: 77 QSAARDGRPAVLRHASPRFREVLDLA 102 >gi|302864949|ref|YP_003833586.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029] gi|315501234|ref|YP_004080121.1| anti-sigma-factor antagonist [Micromonospora sp. L5] gi|302567808|gb|ADL44010.1| anti-anti-sigma factor [Micromonospora aurantiaca ATCC 27029] gi|315407853|gb|ADU05970.1| anti-sigma-factor antagonist [Micromonospora sp. L5] Length = 116 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 2/95 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G + + ++ I+ + +VDL + +D+ G +++ ++ Sbjct: 11 GEHTVLEVGGEVDVYTAPRLRERLLELID--GGARHVVVDLGRVDFLDSTGLGVLVGALK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + E L + T ++ P Sbjct: 69 RLRSAGGSFALVCDKEPLLKIFRITALDQVFPLHP 103 >gi|117924252|ref|YP_864869.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1] gi|117608008|gb|ABK43463.1| anti-anti-sigma regulatory factor [Magnetococcus sp. MC-1] Length = 104 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 7/87 (8%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + TV R G + ++ +V + S I+DL+ +D+ G +I+ E Sbjct: 15 DSETVIRVRGRFNVQQLF----EVNNIRPSDQPNHSYIIDLTETEFLDSSGMGIILRLRE 70 Query: 64 KYHGKIK---LQGVSTHIEQLFSLISF 87 + G + ++ I +L + F Sbjct: 71 QVSGTKENMVIRNARPGIRRLLETVQF 97 >gi|163792954|ref|ZP_02186930.1| putative anti-sigma factor antagonist [alpha proteobacterium BAL199] gi|159181600|gb|EDP66112.1| putative anti-sigma factor antagonist [alpha proteobacterium BAL199] Length = 110 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S++G+ + G S ++ +V I +VD SA+ + + G + + Sbjct: 7 SQDGLAIVVLTGRLDSTNAADTEAKIVAQIEA--GHKRVVVDASALDYLSSAGLRVFLVV 64 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFT 88 ++ G + L ++ H+ ++F + F Sbjct: 65 AKRVKAAGGGLVLHSLTNHVREVFEISGFI 94 >gi|260892754|ref|YP_003238851.1| anti-sigma-factor antagonist [Ammonifex degensii KC4] gi|260864895|gb|ACX52001.1| anti-sigma-factor antagonist [Ammonifex degensii KC4] Length = 116 Score = 38.4 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + R +G + ++ A+++ S + DLSA++ +D+ G +I+ Sbjct: 7 SGDMLLARLSGEIDLKVADALRRELEGALDRYPAS-FLVFDLSAVSFLDSTGLGVILGRY 65 Query: 63 EK---YHGKIKLQGVSTHIEQLFSLISFTH 89 ++ GK+ G ++++ L Sbjct: 66 KRVAEAGGKVAFVGPLPQVKRVLELAGVLR 95 >gi|307327705|ref|ZP_07606889.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] gi|306886603|gb|EFN17605.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] Length = 125 Score = 38.4 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 6/88 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 V + +G + + A+ + ++DLS + D+ G +++ M Sbjct: 9 VVLQVSGEMDLVTSPAVRQHIHDAVAEGRHW--LVLDLSEVRFCDSSGVGVLIAARRLMR 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRK 91 G+++L + S + Sbjct: 67 SCSGRLRLI-LPPQDAAHGSHVHRVLAA 93 >gi|16079404|ref|NP_390228.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. subtilis str. 168] gi|221310265|ref|ZP_03592112.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. subtilis str. 168] gi|221314588|ref|ZP_03596393.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319511|ref|ZP_03600805.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. subtilis str. JH642] gi|221323787|ref|ZP_03605081.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. subtilis str. SMY] gi|321311823|ref|YP_004204110.1| anti-sigma F factor antagonist [Bacillus subtilis BSn5] gi|1174407|sp|P10727|SP2AA_BACSU RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein AA gi|1303998|dbj|BAA12653.1| SpoIIAA [Bacillus subtilis] gi|2634782|emb|CAB14279.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. subtilis str. 168] gi|291484777|dbj|BAI85852.1| anti-anti-sigma-F factor [Bacillus subtilis subsp. natto BEST195] gi|320018097|gb|ADV93083.1| anti-sigma F factor antagonist [Bacillus subtilis BSn5] Length = 117 Score = 38.4 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V ++ K +++L ++ +D+ G +I+ + Sbjct: 13 VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + + + + Q Sbjct: 72 KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 108 >gi|91791864|ref|YP_561515.1| SpoIIAA family protein [Shewanella denitrificans OS217] gi|91713866|gb|ABE53792.1| SpoIIAA family protein [Shewanella denitrificans OS217] Length = 98 Score = 38.4 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+ ++ E+ N Q+ +D+S IT +D+ G L++ Sbjct: 11 CAIQGSLGQQQVIELWPKRRKLFNSDTQA----LDVSGITYVDSAGVALLLELAR 61 >gi|325918460|ref|ZP_08180582.1| anti-anti-sigma factor [Xanthomonas vesicatoria ATCC 35937] gi|325535320|gb|EGD07194.1| anti-anti-sigma factor [Xanthomonas vesicatoria ATCC 35937] Length = 139 Score = 38.4 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + ++ + + I + ++DLSA+ I + G I Sbjct: 12 QDTRQRVILTGRLDTHTYQDLDTALSPLLGTRIT--TLVLDLSALEYISSAGIRCIFKAR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + + + Sbjct: 70 KALATRQGKVLVANPQPQIRKVFDMVKAVPLSDVFASTEELDAYLGAMQR 119 >gi|302037684|ref|YP_003798006.1| putative anti-sigma factor antagonist [Candidatus Nitrospira defluvii] gi|300605748|emb|CBK42081.1| putative Anti-sigma factor antagonist [Candidatus Nitrospira defluvii] Length = 112 Score = 38.4 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + N R GN+ + + + ++ ++DLS + +D+ L+M Sbjct: 7 TSNKKATLRLEGNFTYTQRKAFQEMLKTVCTDQVE--EVVIDLSQVAFLDSAALGLLMIS 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + + ++ + +I Sbjct: 65 HRQLEAERRKLSLAYPQPTVRQIIELA 91 >gi|294630736|ref|ZP_06709296.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292834069|gb|EFF92418.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 139 Score = 38.4 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 4/115 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + NG TV G I + V+ +++ + ++DL +T +D++G +I+ Sbjct: 22 TANGWTVVSVTGEVDVCSAPGIREAVLRLMDEGRRH--FVLDLCEVTFLDSMGLGMIVAI 79 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISF--THRKKIKNQKPQRSFFYNSFKNLHYHI 114 ++ ++ ++ + + P + + N Sbjct: 80 TKRLRSHGGSLTLTCADPRILKVFRIGGLRTVYTFHPSPTEATHHAPQGNGLEGW 134 >gi|297204258|ref|ZP_06921655.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] gi|197715891|gb|EDY59925.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] Length = 148 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G TV F G E+ + + ++DLSA+ D G L+ Sbjct: 39 ERGHTVLEFHGEIDIAAAVELLPFLDRVTGQ--PDARLVIDLSAVEFFDCSGLRLLYRAR 96 Query: 63 EK 64 + Sbjct: 97 SR 98 >gi|229189191|ref|ZP_04316215.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 10876] gi|228594235|gb|EEK52030.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 10876] Length = 112 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---EL 57 + + + G + S++ + ++ ++ +VD + + +D+ G Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 66 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 ++ ++K GK++ GVS +++LF + T Sbjct: 67 LLKAIKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|29826992|ref|NP_821626.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29604090|dbj|BAC68161.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 122 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++ + V +G + + + I + DLS +T D+ G + Sbjct: 12 TDAALAVIALSGEFDIAAAPAVRARALELIAN--GHPDLVADLSGVTFCDSSGLGALVGI 69 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSL 84 + G + L + + +L S+ Sbjct: 70 WRCAKDADGSLTLAAIPDRLSRLLSV 95 >gi|313904792|ref|ZP_07838165.1| anti-sigma-factor antagonist [Eubacterium cellulosolvens 6] gi|313470395|gb|EFR65724.1| anti-sigma-factor antagonist [Eubacterium cellulosolvens 6] Length = 99 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Query: 1 MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 M ENG G E+ + + + D I DLS + I + G +++ Sbjct: 6 MKENGKELTVELKGELNVGTSPELEQALKGKLEEV---DKLIFDLSGLEYISSAGLRVLL 62 Query: 60 YFMEKY--HGKIKLQGVSTHIEQLFSLISFTH 89 + + +G + ++ ++ ++ +F + F+ Sbjct: 63 FSHQTVSKNGTMIIRNLTDEVKDIFEVTGFSD 94 >gi|253997972|ref|YP_003050035.1| hypothetical protein Msip34_0259 [Methylovorus sp. SIP3-4] gi|253984651|gb|ACT49508.1| hypothetical protein Msip34_0259 [Methylovorus sp. SIP3-4] Length = 97 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + G+ P++ + ++ +D VDLSA++++DT ++ ++ + + Sbjct: 12 QVQGDMTMPQV----NKLLAQSQALPMADRLEVDLSAVSDVDTATISVLFEWLRRAQDQ 66 >gi|116751447|ref|YP_848134.1| anti-sigma-factor antagonist [Syntrophobacter fumaroxidans MPOB] gi|116700511|gb|ABK19699.1| anti-anti-sigma regulatory factor, SpoIIAA [Syntrophobacter fumaroxidans MPOB] Length = 110 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF- 61 ENGIT+ G S + + + I + ++DL + I + G +I+ Sbjct: 8 ENGITILVLKGRLDSNTSDQFGEKLYSLI--QAGENKLVLDLGGVDYISSAGLRVIIKSV 65 Query: 62 --MEKYHGKIKLQGVSTHIEQLFSL 84 +++ G++ L + +I ++F L Sbjct: 66 KDLKRIDGQLCLCSMKDYIREIFDL 90 >gi|300113021|ref|YP_003759596.1| anti-sigma-factor antagonist [Nitrosococcus watsonii C-113] gi|299538958|gb|ADJ27275.1| anti-sigma-factor antagonist [Nitrosococcus watsonii C-113] Length = 123 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 FR G + E+A + +DL ++ D+ G L++ ++ Sbjct: 12 HFRMVGELTFNTVPEVAVKGLALFK--GAGKDLRIDLREVSRTDSAGLALLIAWLRYAKK 69 Query: 68 KIKLQGVSTHIEQLFSLIS 86 + K Q+ +L Sbjct: 70 ENKNLRFLNIPAQMLALAQ 88 >gi|297561207|ref|YP_003680181.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845655|gb|ADH67675.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 136 Score = 38.0 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 1/84 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+TV G + D ++ A + S + D +VD+S + D G ++ + Sbjct: 17 GVTVVPVHGEVDLATADRVRDRLLQAAHAS-RCDCLVVDMSGLDFFDASGVSALVAVYKS 75 Query: 65 YHGKIKLQGVSTHIEQLFSLISFT 88 + + ++ ++ Sbjct: 76 LTREGRHVVLAEPAPIAARVLEAL 99 >gi|229016302|ref|ZP_04173249.1| Anti-sigma factor antagonist [Bacillus cereus AH1273] gi|229022541|ref|ZP_04179072.1| Anti-sigma factor antagonist [Bacillus cereus AH1272] gi|228738761|gb|EEL89226.1| Anti-sigma factor antagonist [Bacillus cereus AH1272] gi|228744994|gb|EEL95049.1| Anti-sigma factor antagonist [Bacillus cereus AH1273] Length = 126 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---EL 57 + + + G + S++ + ++ ++ +VD + + +D+ G Sbjct: 23 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 80 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 ++ ++K GK++ GVS +++LF + T Sbjct: 81 LLKAIKKNDGKLEFIGVSKRLKRLFDITGLTE 112 >gi|118619076|ref|YP_907408.1| regulator of sigma subunit, anti-anti-sigma factor RsbU [Mycobacterium ulcerans Agy99] gi|118571186|gb|ABL05937.1| regulator of sigma subunit, anti-anti-sigma factor RsbU [Mycobacterium ulcerans Agy99] Length = 677 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E+G V R G+ S + + A+ S +DLSA+T + + G ++ Sbjct: 577 VTESGHIVVR--GDVDSNTAPTLDRQI--AVESRSGIASLTIDLSAVTHLGSAGVSALVT 632 Query: 61 FMEKYHGKI 69 ++ + Sbjct: 633 ARDRARKQG 641 >gi|146306600|ref|YP_001187065.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp] gi|145574801|gb|ABP84333.1| hypothetical protein Pmen_1569 [Pseudomonas mendocina ymp] Length = 108 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54 G+ E+ + + ++ A+ S +DL + E+D+ G Sbjct: 15 LALLGSLTIYEVRQAHEALLAALTGSAAGGHWQLDLGQLEELDSAG 60 >gi|183983963|ref|YP_001852254.1| regulator of sigma subunit, anti-anti-sigma factor RsbU [Mycobacterium marinum M] gi|183177289|gb|ACC42399.1| regulator of sigma subunit, anti-anti-sigma factor RsbU [Mycobacterium marinum M] Length = 653 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E+G V R G+ S + + A+ S +DLSA+T + + G ++ Sbjct: 553 VTESGHIVVR--GDVDSNTAPTLDRQI--AVESRSGIASLTIDLSAVTHLGSAGVSALVT 608 Query: 61 FMEKYHGKI 69 ++ + Sbjct: 609 ARDRARKQG 617 >gi|296332280|ref|ZP_06874742.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674981|ref|YP_003866653.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. spizizenii str. W23] gi|296150594|gb|EFG91481.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413225|gb|ADM38344.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus subtilis subsp. spizizenii str. W23] Length = 117 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V ++ K +++L ++ +D+ G +I+ + Sbjct: 13 VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + + + + Q Sbjct: 72 KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 108 >gi|15895575|ref|NP_348924.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Clostridium acetobutylicum ATCC 824] gi|15025314|gb|AAK80264.1|AE007731_9 Anti-anti-sigma factor (antagonist of SpoIIAB) [Clostridium acetobutylicum ATCC 824] gi|325509724|gb|ADZ21360.1| Anti-anti-sigma factor (antagonist of SpoIIAB) [Clostridium acetobutylicum EA 2018] Length = 111 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 NG V G EI + + I K + I+D S +T +D+ G +++ + Sbjct: 9 NGKLVVSIIGELDHHSSEEIRNKIDDHI-KFKGYKNVILDFSNVTFMDSSGIGVVIGRYK 67 Query: 64 KY---HGKIKLQGVSTHIEQLFSL 84 K G I + G + ++F L Sbjct: 68 KLNSSGGSICVVGPKESVRRIFEL 91 >gi|143613|gb|AAA22789.1| sporulation protein ORF1 (put.); putative [Bacillus subtilis] Length = 119 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V ++ K +++L ++ +D+ G +I+ + Sbjct: 15 VLCIRLTGELDHHTAETLKQKVTQSLEKD-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + + + + Q Sbjct: 74 KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 110 >gi|270159896|ref|ZP_06188552.1| STAS domain-containing protein [Legionella longbeachae D-4968] gi|289165350|ref|YP_003455488.1| anti-anti-sigma factor [Legionella longbeachae NSW150] gi|269988235|gb|EEZ94490.1| STAS domain-containing protein [Legionella longbeachae D-4968] gi|288858523|emb|CBJ12404.1| putative anti-anti-sigma factor [Legionella longbeachae NSW150] Length = 93 Score = 38.0 bits (87), Expect = 2.2, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY---FMEKYHGKIK 70 + + E+ + + +++ +DLS++ D+ G L++ +K + + Sbjct: 11 DLTFKSVVEVRAKLYQTLMDD-KTNLFTLDLSSVKHCDSAGLALLIEARKLCKKSNKAFE 69 Query: 71 LQGVSTHIEQLFSLI 85 + G+ + L Sbjct: 70 VIGMPAETQALAEFC 84 >gi|326438134|gb|EGD83704.1| hypothetical protein PTSG_11459 [Salpingoeca sp. ATCC 50818] Length = 316 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 GI V + G+ P + I D +V + + + IVD S ++ ID GA + + Sbjct: 179 GGIMVLQLGGSLMFPAVEHIKDMLVE-LRRESSCPAVIVDFSKVSFIDYTGAHGLQDVLR 237 Query: 64 KYHGK 68 + + Sbjct: 238 ELESE 242 >gi|269796790|ref|YP_003316245.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542] gi|269098975|gb|ACZ23411.1| STAS domain-containing protein [Sanguibacter keddieii DSM 10542] Length = 123 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 3/82 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ +G + +++ + VD+ +T +D+ G + Sbjct: 16 DDIHARVVLSGEIDADLSADLQQATE---DVREAGLPVDVDVHHVTFMDSSGVAFLARLT 72 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 G+++L ++ L + Sbjct: 73 SVTPGRVRLHNTPPTVKFLLEV 94 >gi|239981814|ref|ZP_04704338.1| putative anti-sigma factor antagonist [Streptomyces albus J1074] gi|291453673|ref|ZP_06593063.1| anti sigma factor [Streptomyces albus J1074] gi|291356622|gb|EFE83524.1| anti sigma factor [Streptomyces albus J1074] Length = 122 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E V AG + + + A+++ +VD S + D+ G +++ Sbjct: 20 NEGSSAVVTPAGELDHHTADLLRESLEEAVSQGRA--RLVVDCSQLEFCDSTGLNVLLGA 77 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFT 88 E G + L + + ++F + Sbjct: 78 RLKAEAAGGGVHLAAMRPVVARVFQITGAE 107 >gi|189424799|ref|YP_001951976.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacter lovleyi SZ] gi|189421058|gb|ACD95456.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacter lovleyi SZ] Length = 118 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ AG +E+ + + I S + ++D+S I EID G +LI Sbjct: 12 SDGSALKISVAGRLAIDTAAELHG----LLLEEIPSTNILLDVSGIEEIDLAGMQLICSA 67 Query: 62 MEKY 65 Sbjct: 68 CRTA 71 >gi|224371179|ref|YP_002605343.1| RsbV [Desulfobacterium autotrophicum HRM2] gi|223693896|gb|ACN17179.1| RsbV [Desulfobacterium autotrophicum HRM2] Length = 113 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ I VF+ G S + + + + ++K S ++D + I + G +I+ M Sbjct: 8 QDQIEVFKVKGRLDSNTSPLLEEQLNLCLDK--GSTRMVIDFEGLEYISSAGIRVILKTM 65 Query: 63 EKYH---GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 +K GK+ L + +++++F + F ++ + + Sbjct: 66 KKLEHTQGKLVLCTLQDYVQEVFEIAGFDTYLTLEPTREK 105 >gi|78212684|ref|YP_381463.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp. CC9605] gi|78197143|gb|ABB34908.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp. CC9605] Length = 129 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G VF F G + + + VV + + SA++DLS I +D+ G ++ + Sbjct: 27 DGCLVFHFTGQLDAYSEKQFMEYVVDVLKAN--KLSAVLDLSKIDFLDSSGLGALVQLAK 84 Query: 64 KYHGKIK 70 + + Sbjct: 85 QCTDSKR 91 >gi|313200039|ref|YP_004038697.1| hypothetical protein MPQ_0272 [Methylovorus sp. MP688] gi|312439355|gb|ADQ83461.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 97 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 10 RFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + G+ P++ + ++ +D VDLSA++++DT ++ ++ + + Sbjct: 12 QVQGDMTMPQV----NKLLAQSQALPMADRLEVDLSAVSDVDTATISVLFEWLRRAQDQ 66 >gi|300787743|ref|YP_003768034.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299797257|gb|ADJ47632.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 126 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 2/83 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G V R G ++ A + ++DL+ +T + + G ++ Sbjct: 25 NRDGAVVLRVDGALDLALAPKLRRLAERA--ARLGPSLLVIDLTGVTFLASAGMAELVRA 82 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 L+ V+ L L Sbjct: 83 HRGPTASAPLRVVAAGRITLRPL 105 >gi|296536653|ref|ZP_06898723.1| STAS domain protein [Roseomonas cervicalis ATCC 49957] gi|296263020|gb|EFH09575.1| STAS domain protein [Roseomonas cervicalis ATCC 49957] Length = 102 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 AG + VMA + + ++DL+ + ID+ G +++ E Sbjct: 10 DAASLAIAGALTFDA-HAVFRQRVMAEAERPAAQPLVLDLAGLDHIDSAGLGMLLLAREV 68 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + + + Q+ +++ + ++ +P Sbjct: 69 AAAQGRGIVLRGARGQVARILAVSKFHQLFTLQP 102 >gi|289662319|ref|ZP_06483900.1| hypothetical protein XcampvN_04303 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 96 Score = 38.0 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 8/89 (8%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ + +DL+ + +D+ G ++ + Sbjct: 12 TLVITGVLDRAAVTAAWPQAIAQLDSARA-----LDLAGVQRLDSAGVAMLAELAARLRQ 66 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 67 TGSGAVVGEASGLDELRAAYRLSPTLDFQ 95 >gi|239930844|ref|ZP_04687797.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291439214|ref|ZP_06578604.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672] gi|291342109|gb|EFE69065.1| anti sigma factor [Streptomyces ghanaensis ATCC 14672] Length = 125 Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V AG + + + + K ++D S + D+ G +++ Sbjct: 21 EGPSAVVTPAGELDHHTADLLREPLEECLAK--GFKRLVIDCSRLEFCDSTGLNVLLGAR 78 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 E G + L G+ + ++F + Sbjct: 79 LKAEAAGGGVHLVGMQPVVARVFEI 103 >gi|325927589|ref|ZP_08188821.1| putative NTP binding protein (contains STAS domain) [Xanthomonas perforans 91-118] gi|325542054|gb|EGD13564.1| putative NTP binding protein (contains STAS domain) [Xanthomonas perforans 91-118] Length = 96 Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 10/88 (11%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66 AG ++ + ++ + +DLS + +D+ G ++ + Sbjct: 13 LVIAGVLDRAAVTAAWPQAIAQLD-----GARTLDLSGVQRLDSAGVAMLAELAARLRQA 67 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 68 GSGAVVGEASGLDELRAAYRLSPTLDFQ 95 >gi|196248281|ref|ZP_03146982.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16] gi|196212006|gb|EDY06764.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16] Length = 141 Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 40/122 (32%), Gaps = 4/122 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---Y 65 + G +++A +++ ++D+S + +D+ G ++ F ++ Sbjct: 21 IKLTGRLAYDTQLAAEQKLLVA-AAAVKRRLVVIDVSGLQFLDSTGLAFLVRFFKQVVSA 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + + + + + LI+ R Q ++ +++ Sbjct: 80 NRAMAMIVRDNAVLKKILLIAKLDRLLPIVADEQELLSLPPLRSPDSIGQEELYSAWQQC 139 Query: 126 CS 127 S Sbjct: 140 RS 141 >gi|117164608|emb|CAJ88154.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 112 Score = 38.0 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 6/83 (7%), Positives = 23/83 (27%), Gaps = 2/83 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G+ + + + ++DL+ + D+ G ++ Sbjct: 14 GPVLAIFGDLDYATAGRLRELLTTLTLS--PGQLLVLDLAGMEFCDSSGITALIVARNHA 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 +++ + ++ Sbjct: 72 RAAQADVALASVPDHTLRVLRMV 94 >gi|294631424|ref|ZP_06709984.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292834757|gb|EFF93106.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 107 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHAQVVVGGRLDVRSAADARTALHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGVH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+ V +++L Sbjct: 62 RRAGRCGRRLVLRDVPPQMQRLLVATRLHR 91 >gi|42780160|ref|NP_977407.1| anti sigma b factor antagonist RsbV [Bacillus cereus ATCC 10987] gi|42736078|gb|AAS40015.1| anti sigma b factor antagonist RsbV [Bacillus cereus ATCC 10987] Length = 111 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 8 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97 >gi|89096314|ref|ZP_01169207.1| YqhA [Bacillus sp. NRRL B-14911] gi|89089168|gb|EAR68276.1| YqhA [Bacillus sp. NRRL B-14911] Length = 262 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + V G+ +++ + + + + ++DLS + IDT A ++ + Sbjct: 161 SDDVAVISLVGDLDRKRTNDLMEKALQYGARRSLNC-MVIDLSGVEFIDTRIAHELLRTV 219 Query: 63 EK---YHGKIKLQGVSTHIEQ 80 + +KL G+ I Q Sbjct: 220 KAIQITGMTVKLTGIRPEIAQ 240 >gi|228964057|ref|ZP_04125184.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar sotto str. T04001] gi|228795627|gb|EEM43107.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar sotto str. T04001] Length = 112 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62 + G + S++ + ++ N+ +VD + +D+ G + + + Sbjct: 14 GYTVQLTGEIDAYTASDLKNKIMPIANEKEVH--IVVDFHNVDYMDSTGLGVFIALLKAV 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 +K GK++ GVS +++LF + T Sbjct: 72 KKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|37527882|ref|NP_931227.1| hypothetical protein plu4030 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787318|emb|CAE16402.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 97 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + + + +++S + +D+ G L++ F Sbjct: 13 TLILKGTLDRNSLLPLWQQKEKLLVEIND-----INVSQLEYVDSTGLALLVRFKHHMQM 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + S E+L +LI+ Sbjct: 68 RGDKLRFSGIDERLNTLITL 87 >gi|317050785|ref|YP_004111901.1| anti-anti-sigma factor [Desulfurispirillum indicum S5] gi|316945869|gb|ADU65345.1| anti-anti-sigma factor [Desulfurispirillum indicum S5] Length = 117 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Query: 3 ENGITVFRFAG-NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 ++GI V G + E+ + + K Q +VDL + +D+ G ++ Sbjct: 8 QDGIIVVCVEGERLDAHNSVELKEYLQKLQEKGPQ--RVVVDLGRVQFMDSSGIGALVAG 65 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISF 87 + G ++L +++ +E +F L Sbjct: 66 FKGLRAAGGDLRLCCIASPVEAIFQLTRL 94 >gi|284044841|ref|YP_003395181.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] gi|283949062|gb|ADB51806.1| anti-sigma-factor antagonist [Conexibacter woesei DSM 14684] Length = 846 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55 E+G T + +G + D + + Q + +VDL +T ID+ G Sbjct: 744 EDGRTSLQLSGELDLQTTPQFRDRLA---DVEPQDGTLVVDLRRLTFIDSSGI 793 >gi|260596179|ref|YP_003208750.1| hypothetical protein CTU_03870 [Cronobacter turicensis z3032] gi|260215356|emb|CBA27356.1| Uncharacterized protein yrbB [Cronobacter turicensis z3032] Length = 100 Score = 38.0 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 5/49 (10%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG 54 R G + + + +S+ +DLS + +DT G Sbjct: 11 GAQLRLNGTLDRETLLPLWEQ-----RQSLTDGLQRIDLSGLARVDTAG 54 >gi|254383948|ref|ZP_04999295.1| anti-sigma factor antagonist [Streptomyces sp. Mg1] gi|194342840|gb|EDX23806.1| anti-sigma factor antagonist [Streptomyces sp. Mg1] Length = 126 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 2/96 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V AG + + + A+ + ++ +VD + D+ G +++ + Sbjct: 24 TAVVAVAGELDHDHAEPLREAISGALEQ--GAERIVVDCERLAFCDSTGLNILLRGRLEA 81 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 +++ + + T K + P+ Sbjct: 82 RETGSSVELASLGPTVGRMFEITGAKAVFTVYPELP 117 >gi|119476903|ref|ZP_01617184.1| high affinity sulfate transporter [marine gamma proteobacterium HTCC2143] gi|119449710|gb|EAW30947.1| high affinity sulfate transporter [marine gamma proteobacterium HTCC2143] Length = 505 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 25/74 (33%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + AG + + +V ++K ++ I+DL + ID GA +I + Sbjct: 411 TLLLEPAGVLFFGSAQGLDETLVDELSKHPEAKELILDLRGLGRIDYTGALVIHRIALEA 470 Query: 66 HGKIKLQGVSTHIE 79 V Sbjct: 471 EQAGLAVKVIPGQP 484 >gi|85858336|ref|YP_460538.1| anti-sigma F factor antagonist [Syntrophus aciditrophicus SB] gi|85721427|gb|ABC76370.1| anti-sigma F factor antagonist [Syntrophus aciditrophicus SB] Length = 194 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 2/74 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +EN ITV G + + D + I K + + +VD + I + G I+ Sbjct: 90 TENNITVVTVTGRMDALTAPDYQDKLNELIAK--GATTFVVDFEGLDYIGSAGLRGILST 147 Query: 62 MEKYHGKIKLQGVS 75 + GK + Sbjct: 148 AKALKGKGGEVHFA 161 >gi|212638843|ref|YP_002315363.1| stage II sporulation protein AA (antagonist of anti-sigma factor, stand-alone STAS domain) [Anoxybacillus flavithermus WK1] gi|212560323|gb|ACJ33378.1| Stage II sporulation protein AA (antagonist of anti-sigma factor, stand-alone STAS domain) [Anoxybacillus flavithermus WK1] Length = 118 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + + R AG ++ ++ + + + + +++L+ +T +D+ G +I+ + Sbjct: 15 VLLVRLAGELDHHTAEQLRAEITDVLERE-RIKAIVLNLNELTFMDSSGLGVILGRYKQI 73 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ G++ + VS I++LF + Sbjct: 74 QRMGGEMVVCSVSPSIKRLFDM 95 >gi|297204175|ref|ZP_06921572.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] gi|197714139|gb|EDY58173.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] Length = 122 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI--- 58 ++ + V +G + + + I + DLS +T D+ G + Sbjct: 12 TDGALAVIALSGEFDIAAAPAVRARALELIAN--GHPDLLADLSGVTFCDSSGLGALVGI 69 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSL 84 + G + L + + +L S+ Sbjct: 70 WRCAKDAGGSLTLAAIPDRLGRLLSV 95 >gi|29827462|ref|NP_822096.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29604561|dbj|BAC68631.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 139 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 27/87 (31%), Gaps = 5/87 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME-- 63 V G+ E+ + + ++DL+ + D+ G L++ Sbjct: 17 GPVLEITGDLDHETSPELRHAIDRLTLA--RGQLLVLDLAGLRFCDSSGITLLLAARNLA 74 Query: 64 -KYHGKIKLQGVSTHIEQLFSLISFTH 89 + L V + ++ ++ Sbjct: 75 IEAGVDTVLAAVPANTARVLGIVGLDQ 101 >gi|289667682|ref|ZP_06488757.1| hypothetical protein XcampmN_04032 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 91 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 8/89 (8%), Positives = 31/89 (34%), Gaps = 7/89 (7%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 G ++ + ++ + +DL+ + +D+ G ++ + Sbjct: 7 TLVITGVLDRAAVTAAWPQAIAQLDSARA-----LDLAGVQRLDSAGVAMLAELAARLRQ 61 Query: 67 -GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 62 TGSGAVVGEASGLDELRAAYRLSPTLDFQ 90 >gi|253576352|ref|ZP_04853682.1| anti-sigma F factor antagonist [Paenibacillus sp. oral taxon 786 str. D14] gi|251844245|gb|EES72263.1| anti-sigma F factor antagonist [Paenibacillus sp. oral taxon 786 str. D14] Length = 117 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 33/82 (40%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R +G + + I + + ++ L + +D+ G +I+ + Sbjct: 13 TLIVRLSGELDHHTADNVRMRMDEEIAR-GNCRNLVLSLKELQFMDSSGIGVILGRYKLI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 ++ GK+ + V+ + +L + Sbjct: 72 KQKGGKMVVCDVNPPVYRLLEM 93 >gi|295836989|ref|ZP_06823922.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197697449|gb|EDY44382.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 122 Score = 38.0 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 27/92 (29%), Gaps = 2/92 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V AG + + + ++ ++D S + D+ G +++ + Sbjct: 25 VVVALAGELDHHTAELLREPLDSKLDA--GHARIVLDCSELEFCDSTGLNVLLGARLRAE 82 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 ++ + + T + P Sbjct: 83 AAGGGVHLAAMQPVVSRVFEITGADAVFQVHP 114 >gi|294501137|ref|YP_003564837.1| anti-sigma F factor antagonist [Bacillus megaterium QM B1551] gi|294351074|gb|ADE71403.1| anti-sigma F factor antagonist [Bacillus megaterium QM B1551] Length = 116 Score = 38.0 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + + R G E+ + AI K S I++L +T +D+ G +I+ ++ Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70 Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84 G++ + +S IE+LF++ Sbjct: 71 VHNNGGEMVVCAISPAIERLFNM 93 >gi|318056727|ref|ZP_07975450.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actG] gi|318075361|ref|ZP_07982693.1| putative anti-sigma factor antagonist [Streptomyces sp. SA3_actF] Length = 122 Score = 38.0 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 23/73 (31%), Gaps = 2/73 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V AG + + + ++ D ++D S + D+ G +++ + Sbjct: 25 VVVALAGELDHHTAELLREPLDSKLDA--GRDRIVLDCSELEFCDSTGLNVLLGARLRAE 82 Query: 67 GKIKLQGVSTHIE 79 ++ Sbjct: 83 AAGGGIHLAAMQP 95 >gi|138895138|ref|YP_001125591.1| anti-sigma factor [Geobacillus thermodenitrificans NG80-2] gi|134266651|gb|ABO66846.1| Anti-sigma factor (antagonist of SpoIIAB) [Geobacillus thermodenitrificans NG80-2] Length = 142 Score = 38.0 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 40/122 (32%), Gaps = 4/122 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK---Y 65 + G +++A +++ ++D+S + +D+ G ++ F ++ Sbjct: 22 IKLTGRLAYDTQLAAEQKLLVA-AAAVKRRLVVIDVSGLQFLDSTGLAFLVRFFKQVVSA 80 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 + + + + + LI+ R Q ++ +++ Sbjct: 81 NRAMAMIVRDNAVLKKILLIAKLDRLLPIVADEQELLSLPPLRSPDSIGQEELYSAWQQC 140 Query: 126 CS 127 S Sbjct: 141 RS 142 >gi|295706484|ref|YP_003599559.1| anti-sigma F factor antagonist [Bacillus megaterium DSM 319] gi|294804143|gb|ADF41209.1| anti-sigma F factor antagonist [Bacillus megaterium DSM 319] Length = 116 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + + R G E+ + AI K S I++L +T +D+ G +I+ ++ Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70 Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84 G++ + +S +E+LF++ Sbjct: 71 VHNNGGEMVVCAISPAVERLFNM 93 >gi|229154666|ref|ZP_04282781.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 4342] gi|228628614|gb|EEK85326.1| Anti-sigma factor antagonist [Bacillus cereus ATCC 4342] Length = 112 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFTEVEYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|288555614|ref|YP_003427549.1| multi-sensor hybrid histidine kinase [Bacillus pseudofirmus OF4] gi|288546774|gb|ADC50657.1| multi-sensor hybrid histidine kinase [Bacillus pseudofirmus OF4] Length = 848 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 19/191 (9%) Query: 169 PVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI-AGRSGSA 227 + I++S V A L + + RE ++ AV + G Sbjct: 13 GLSIILSIFIALVAAYTSIDLLEK-------VYTKKQYFTREFWAVVAAVTLGVGVWSMH 65 Query: 228 IVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIVIW 287 ++ +G + AI + L V ++ + LII + A F ++ V Sbjct: 66 FISMLGYNSHHHTQHAISPIILSIVFSILFSSLTLLIIMKSTSYLHAVFGSLSFGVGVSI 125 Query: 288 KYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVT 347 +Y ++ + + GLI +A GF + S G VT Sbjct: 126 LHYAGLMSMHGGEAADVFNITQVLVGLISGSILAFI--------GFRIFRTSIE-GTNVT 176 Query: 348 TC--VVQSISI 356 VV SI + Sbjct: 177 LSHKVVSSILL 187 >gi|302554190|ref|ZP_07306532.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM 40736] gi|302471808|gb|EFL34901.1| anti-sigma factor antagonist [Streptomyces viridochromogenes DSM 40736] Length = 107 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+GV +++L Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|254820821|ref|ZP_05225822.1| hypothetical protein MintA_12883 [Mycobacterium intracellulare ATCC 13950] Length = 113 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G++V +G + + + +S + ++DLSA+ + ++G +++ E Sbjct: 6 DGVSVVSVSGEIDLVTAPALEQAIGAVVAESPTA--LVIDLSAVEFLGSVGLKILAATYE 63 Query: 64 KYHGK 68 K Sbjct: 64 KLGKD 68 >gi|117164500|emb|CAJ88046.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens ATCC 23877] Length = 134 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GI V G + ++ + +A + ++D+ +T +D+ G +++ + Sbjct: 35 DGIRVLALTGEIDNDTGGQLRQALDVAGTDRPR---IVLDMRQVTFMDSSGINILIAAHQ 91 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 ++ + + ++ Sbjct: 92 DIAASGGWLRLAAPTDAVLRVLRLV 116 >gi|114049901|emb|CAK50918.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens] gi|114050123|emb|CAK51156.1| putative anti-sigma factor antagonist [Streptomyces ambofaciens] Length = 139 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 5/83 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G + ++ +AD + A + ++D S IT D+ L++ + Sbjct: 46 GAWVVSARGPYDMSTVTPLADALDTAAKEHP---KVVLDASGITFADSALLNLLILTHQA 102 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 ++ + +++L L + Sbjct: 103 ADFRVAAP--AQQLKRLLQLTAA 123 >gi|77165087|ref|YP_343612.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|254433230|ref|ZP_05046738.1| STAS domain protein [Nitrosococcus oceani AFC27] gi|76883401|gb|ABA58082.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus oceani ATCC 19707] gi|207089563|gb|EDZ66834.1| STAS domain protein [Nitrosococcus oceani AFC27] Length = 170 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V R G+ + P +S D + + + +VDL+ ID+ L++ + Sbjct: 12 DGVHVLRLLGDMRYP-LSPSLDHFLQRLFSEVTPQGFVVDLTDTRSIDSTNLGLLVRIAK 70 Query: 64 KYHGKIKLQ 72 + + + Sbjct: 71 LMQRRGQPR 79 >gi|83309678|ref|YP_419942.1| anti-anti-sigma regulatory factor [Magnetospirillum magneticum AMB-1] gi|82944519|dbj|BAE49383.1| Anti-anti-sigma regulatory factor [Magnetospirillum magneticum AMB-1] Length = 132 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ R G S++ + SI++ +VDL+ + +D++G ++ Sbjct: 40 QDDTLTVRLDGTMDYTVTSQMNSLISDI--GSIKAARVVVDLTKVARVDSVGLGMLHLAK 97 Query: 63 EK---YHGKIKLQGVSTHIEQLFSL 84 ++ + L+G S ++ +LF L Sbjct: 98 DEIVSNGRHLTLRGASGNVRRLFEL 122 >gi|67902764|ref|XP_681638.1| hypothetical protein AN8369.2 [Aspergillus nidulans FGSC A4] gi|40747733|gb|EAA66889.1| hypothetical protein AN8369.2 [Aspergillus nidulans FGSC A4] gi|259484298|tpe|CBF80400.1| TPA: glycosyl transferase, putative (AFU_orthologue; AFUA_4G14070) [Aspergillus nidulans FGSC A4] Length = 2822 Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 51/214 (23%) Query: 156 LIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLL 215 ++ ++G+ +P +I I +T L + + E + Sbjct: 846 FYYRITFLGIFALPALIDIMMLTTVGRGL----------------YLTTFMSSTEKTLAT 889 Query: 216 TAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILAN 275 TA+M+A + I S + MG + + + R A + +T++ Sbjct: 890 TALMVALLVCGGFGSWISS----GGSYYLYAMGFPAMSMFVMTRFIAGL----AVTLVGG 941 Query: 276 FSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE--GF 333 A I + I F ++F + + ++A+ + GF Sbjct: 942 LIAFICICCIKSFAAGIVFFLYFFFLSTYL----------------MLLSVLAIYQLPGF 985 Query: 334 AVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 V+ S ++ I + ++ Sbjct: 986 QFQSG---------RTVIMSCVPILFIGPIVTLW 1010 >gi|308369779|ref|ZP_07419032.2| hypothetical protein TMBG_01195 [Mycobacterium tuberculosis SUMu002] gi|308377707|ref|ZP_07480124.2| hypothetical protein TMIG_03048 [Mycobacterium tuberculosis SUMu009] gi|308326440|gb|EFP15291.1| hypothetical protein TMBG_01195 [Mycobacterium tuberculosis SUMu002] gi|308354860|gb|EFP43711.1| hypothetical protein TMIG_03048 [Mycobacterium tuberculosis SUMu009] Length = 677 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 577 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 632 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 633 ACDRARKQGTE 643 >gi|307328257|ref|ZP_07607435.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] gi|306886091|gb|EFN17099.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] Length = 113 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + TV G ++ + +V +N + +VD+ + +D+ G +++ ++ Sbjct: 11 DDRTVVEVGGEIDVYTAPKLREQLVELVND--GNYHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|288942535|ref|YP_003444775.1| STAS domain-containing protein [Allochromatium vinosum DSM 180] gi|288897907|gb|ADC63743.1| STAS domain-containing protein [Allochromatium vinosum DSM 180] Length = 109 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 9/93 (9%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 10 RFAGNWKSPEISEI--ADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 G + + V++ + S +VDL+ + ++ G L++ ++ + Sbjct: 16 TLDGVLDFDTVGRLAVEGQVLLRTAAARGQASLVVDLAGVERANSAGLALLLEWLEMARR 75 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + + + +L ++ + Sbjct: 76 RGLHLSYAHLPDSLGRLAAVSNLGDLLAPAAPP 108 >gi|228919824|ref|ZP_04083182.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839840|gb|EEM85123.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 112 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ GK++ GVS +++LF + T Sbjct: 67 LLKAVKRNDGKLEFTGVSKRLKRLFDITGLTE 98 >gi|52080864|ref|YP_079655.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus licheniformis ATCC 14580] gi|52786236|ref|YP_092065.1| hypothetical protein BLi02497 [Bacillus licheniformis ATCC 14580] gi|319645179|ref|ZP_07999412.1| anti-sigma F factor antagonist [Bacillus sp. BT1B_CT2] gi|52004075|gb|AAU24017.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus licheniformis ATCC 14580] gi|52348738|gb|AAU41372.1| SpoIIAA [Bacillus licheniformis ATCC 14580] gi|317392988|gb|EFV73782.1| anti-sigma F factor antagonist [Bacillus sp. BT1B_CT2] Length = 117 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 10/97 (10%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V + +++L+ ++ +D+ G +++ + Sbjct: 13 VLCIRLTGELDHHTAETLRKQVSDHLE-QTDIRHIVMNLADLSFMDSSGLGVVLGRYKEI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + +++ + + Sbjct: 72 KQLGGEMIVCAISPAVKRLFDMSGLFKIIRLEQSEQR 108 >gi|312134332|ref|YP_004001670.1| anti-sigma-factor antagonist [Caldicellulosiruptor owensensis OL] gi|311774383|gb|ADQ03870.1| anti-sigma-factor antagonist [Caldicellulosiruptor owensensis OL] Length = 102 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SENG+ V G + D + I+ S S I+D++ ++ ID+ G + + Sbjct: 9 VSENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIIDMNDVSYIDSTGLGVFVG 65 Query: 61 FMEKYHGKI 69 ++K K Sbjct: 66 ALKKSKQKG 74 >gi|218753076|ref|ZP_03531872.1| hypothetical protein MtubG1_06364 [Mycobacterium tuberculosis GM 1503] gi|289761525|ref|ZP_06520903.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709031|gb|EFD73047.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length = 653 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 609 ACDRARKQGTE 619 >gi|297197241|ref|ZP_06914638.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] gi|197717271|gb|EDY61305.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] Length = 125 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 2/64 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GITV G + + + A ++DLS +T +D+ G ++ + Sbjct: 21 DGITVLGLDGEIDHQSVGGLTRALARADAAV--GRRVVIDLSRVTFMDSSGVNALIAAFQ 78 Query: 64 KYHG 67 Sbjct: 79 SAQA 82 >gi|308370699|ref|ZP_07422417.2| hypothetical protein TMCG_00999 [Mycobacterium tuberculosis SUMu003] gi|308371947|ref|ZP_07426784.2| hypothetical protein TMDG_03480 [Mycobacterium tuberculosis SUMu004] gi|308373120|ref|ZP_07431090.2| hypothetical protein TMEG_01268 [Mycobacterium tuberculosis SUMu005] gi|308374293|ref|ZP_07435490.2| hypothetical protein TMFG_02558 [Mycobacterium tuberculosis SUMu006] gi|308331163|gb|EFP20014.1| hypothetical protein TMCG_00999 [Mycobacterium tuberculosis SUMu003] gi|308334945|gb|EFP23796.1| hypothetical protein TMDG_03480 [Mycobacterium tuberculosis SUMu004] gi|308338750|gb|EFP27601.1| hypothetical protein TMEG_01268 [Mycobacterium tuberculosis SUMu005] gi|308342449|gb|EFP31300.1| hypothetical protein TMFG_02558 [Mycobacterium tuberculosis SUMu006] Length = 674 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 574 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 629 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 630 ACDRARKQGTE 640 >gi|260204626|ref|ZP_05772117.1| hypothetical protein MtubK8_10016 [Mycobacterium tuberculosis K85] gi|289574031|ref|ZP_06454258.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis K85] gi|289538462|gb|EFD43040.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis K85] Length = 653 Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 609 ACDRARKQGTE 619 >gi|269957909|ref|YP_003327698.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] gi|269306590|gb|ACZ32140.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] Length = 140 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 29/81 (35%), Gaps = 2/81 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 T G+ E + + + ++ ++D+ +T +D+ GA ++ + Sbjct: 10 TTTLVITGDLDLAERDQFPEIASRVVG--LRRQLLVIDMCRVTFMDSTGAAFLISLADSG 67 Query: 66 HGKIKLQGVSTHIEQLFSLIS 86 + + E+ ++ Sbjct: 68 RKRGGATVLRGADERDLFVLE 88 >gi|197117437|ref|YP_002137864.1| hypothetical protein Gbem_1047 [Geobacter bemidjiensis Bem] gi|197086797|gb|ACH38068.1| conserved hypothetical protein [Geobacter bemidjiensis Bem] Length = 105 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINK--SIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 F G+ E +E+ +V + + +++ A +DL + ID G +L+ F+E Sbjct: 11 HITFQGSCSREEAAELHRALVCRLTELVERKAEQAELDLRQVDRIDACGCQLLALFLEDL 70 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 +L + +S Sbjct: 71 RRHGITPAACQLGPELAAQVSLL 93 >gi|53804035|ref|YP_114129.1| anti-sigma B factor antagonist [Methylococcus capsulatus str. Bath] gi|53757796|gb|AAU92087.1| anti-sigma B factor antagonist [Methylococcus capsulatus str. Bath] Length = 111 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 5/92 (5%) Query: 4 NGITVFRFAG--NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +G TV R G + E+ D ++ + IVDLS ++ ID+ G ++ Sbjct: 9 DGKTVLRL-GEPRLDAHNSGELKDFMLRLLE--GGGRHLIVDLSPVSFIDSSGLGALLSG 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + + ++ ++ ++ T ++ Sbjct: 66 QKNAALRSGAFMLAGLQPRVHAMFELTRLHRV 97 >gi|148822586|ref|YP_001287340.1| hypothetical protein TBFG_11395 [Mycobacterium tuberculosis F11] gi|215403213|ref|ZP_03415394.1| hypothetical protein Mtub0_05846 [Mycobacterium tuberculosis 02_1987] gi|215411011|ref|ZP_03419819.1| hypothetical protein Mtub9_06688 [Mycobacterium tuberculosis 94_M4241A] gi|215430251|ref|ZP_03428170.1| hypothetical protein MtubE_06154 [Mycobacterium tuberculosis EAS054] gi|215445546|ref|ZP_03432298.1| hypothetical protein MtubT_06242 [Mycobacterium tuberculosis T85] gi|219557268|ref|ZP_03536344.1| hypothetical protein MtubT1_08157 [Mycobacterium tuberculosis T17] gi|253799586|ref|YP_003032587.1| hypothetical protein TBMG_02614 [Mycobacterium tuberculosis KZN 1435] gi|254364256|ref|ZP_04980302.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254550379|ref|ZP_05140826.1| hypothetical protein Mtube_07950 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186304|ref|ZP_05763778.1| hypothetical protein MtubCP_09782 [Mycobacterium tuberculosis CPHL_A] gi|260200421|ref|ZP_05767912.1| hypothetical protein MtubT4_09903 [Mycobacterium tuberculosis T46] gi|289442808|ref|ZP_06432552.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289446960|ref|ZP_06436704.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis CPHL_A] gi|289554844|ref|ZP_06444054.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289569378|ref|ZP_06449605.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289745116|ref|ZP_06504494.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis 02_1987] gi|289753446|ref|ZP_06512824.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis EAS054] gi|289757469|ref|ZP_06516847.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis T85] gi|294994923|ref|ZP_06800614.1| hypothetical protein Mtub2_10540 [Mycobacterium tuberculosis 210] gi|297633919|ref|ZP_06951699.1| hypothetical protein MtubK4_07345 [Mycobacterium tuberculosis KZN 4207] gi|297730908|ref|ZP_06960026.1| hypothetical protein MtubKR_07445 [Mycobacterium tuberculosis KZN R506] gi|298524871|ref|ZP_07012280.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|313658241|ref|ZP_07815121.1| regulator of sigma subunit, anti-anti-sigma factor RsbU [Mycobacterium tuberculosis KZN V2475] gi|134149770|gb|EBA41815.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148721113|gb|ABR05738.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253321089|gb|ACT25692.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289415727|gb|EFD12967.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289419918|gb|EFD17119.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis CPHL_A] gi|289439476|gb|EFD21969.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289543132|gb|EFD46780.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289685644|gb|EFD53132.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis 02_1987] gi|289694033|gb|EFD61462.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis EAS054] gi|289713033|gb|EFD77045.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis T85] gi|298494665|gb|EFI29959.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|323720119|gb|EGB29223.1| hypothetical protein TMMG_02067 [Mycobacterium tuberculosis CDC1551A] gi|326902987|gb|EGE49920.1| hypothetical protein TBPG_00845 [Mycobacterium tuberculosis W-148] gi|328459333|gb|AEB04756.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 653 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 609 ACDRARKQGTE 619 >gi|41406478|ref|NP_959314.1| hypothetical protein MAP0380 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394827|gb|AAS02697.1| hypothetical protein MAP_0380 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 122 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G++V +G + + + S + ++DLSA+ + ++G +++ E Sbjct: 15 DGVSVVSVSGEIDMVTAPALEQAIGAVVADSPPA--LVIDLSAVEFLGSVGLKILAATYE 72 Query: 64 KYHGK 68 K + Sbjct: 73 KLGKE 77 >gi|257051283|ref|YP_003129116.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940] gi|256690046|gb|ACV10383.1| putative PAS/PAC sensor protein [Halorhabdus utahensis DSM 12940] Length = 255 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ + G+ + + + ++++ I ++ A++D++ + IDT A+ ++ + Sbjct: 143 DGVILTTVVGSLDTAKAERLTEELLDRI-VEAEASVALIDITGVAAIDTATAQHLIDTIN 201 Query: 64 K---YHGKIKLQGVSTHIEQ 80 ++ + G+S I Q Sbjct: 202 AVNLLGARVVITGISPDIAQ 221 >gi|167625599|ref|YP_001675893.1| SpoIIAA family protein [Shewanella halifaxensis HAW-EB4] gi|167355621|gb|ABZ78234.1| SpoIIAA family protein [Shewanella halifaxensis HAW-EB4] Length = 97 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 4/77 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 +G + + + D+A + LS I D+ G ++ + + K Sbjct: 11 CSVSGRLDQDAVIRLWSGRSNILEP----DTACLQLSGIEYCDSAGVAFLLELVSIFAAK 66 Query: 69 IKLQGVSTHIEQLFSLI 85 + + EQL I Sbjct: 67 GATLKLISPSEQLKKFI 83 >gi|149183715|ref|ZP_01862125.1| RsbV [Bacillus sp. SG-1] gi|148848574|gb|EDL62814.1| RsbV [Bacillus sp. SG-1] Length = 135 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 1 MSENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL-- 57 ++EN + + G + ++ D + + + VDLS ++ +D+ G + Sbjct: 32 LNENDKVIDVKVNGEIDAYTAPKLKDALASTAEEQ--NVVMNVDLSEVSYMDSTGLGVFV 89 Query: 58 -IMYFMEKYHGKIKLQGVSTHIEQLFSL 84 + ++ G++ L G+S +++LF + Sbjct: 90 GLFKTIKANGGQLYLNGLSERLKRLFDI 117 >gi|31792560|ref|NP_855053.1| hypothetical protein Mb1399c [Mycobacterium bovis AF2122/97] gi|121637295|ref|YP_977518.1| hypothetical protein BCG_1426c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989769|ref|YP_002644456.1| hypothetical protein JTY_1400 [Mycobacterium bovis BCG str. Tokyo 172] gi|31618149|emb|CAD94260.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121492942|emb|CAL71413.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772882|dbj|BAH25688.1| hypothetical protein JTY_1400 [Mycobacterium bovis BCG str. Tokyo 172] Length = 653 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 609 ACDRARKQGTE 619 >gi|15840822|ref|NP_335859.1| hypothetical protein MT1410 [Mycobacterium tuberculosis CDC1551] gi|13881019|gb|AAK45673.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis CDC1551] Length = 681 Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 581 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 636 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 637 ACDRARKQGTE 647 >gi|308231819|ref|ZP_07413882.2| hypothetical protein TMAG_03511 [Mycobacterium tuberculosis SUMu001] gi|308378917|ref|ZP_07484315.2| hypothetical protein TMJG_03753 [Mycobacterium tuberculosis SUMu010] gi|308380055|ref|ZP_07488535.2| hypothetical protein TMKG_01868 [Mycobacterium tuberculosis SUMu011] gi|308215971|gb|EFO75370.1| hypothetical protein TMAG_03511 [Mycobacterium tuberculosis SUMu001] gi|308358833|gb|EFP47684.1| hypothetical protein TMJG_03753 [Mycobacterium tuberculosis SUMu010] gi|308362771|gb|EFP51622.1| hypothetical protein TMKG_01868 [Mycobacterium tuberculosis SUMu011] Length = 674 Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 574 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 629 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 630 ACDRARKQGTE 640 >gi|238062260|ref|ZP_04606969.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149] gi|237884071|gb|EEP72899.1| anti-sigma-factor antagonist [Micromonospora sp. ATCC 39149] Length = 118 Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 2/100 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 TV G + + ++ ++ + +VDL + +D+ G +++ +++ Sbjct: 14 TVLEVGGEVDVYTAPRLRERLLELVD--GGARHVVVDLGRVDFLDSTGLGVLVGALKRLR 71 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 + E L + T ++ P + Sbjct: 72 AAGGSFALVCGKEPLLKIFRITALDQVFPLHPTVDAAIGA 111 >gi|21241341|ref|NP_640923.1| anti-sigma F factor antagonist [Xanthomonas axonopodis pv. citri str. 306] gi|21106668|gb|AAM35459.1| anti-sigma F factor antagonist [Xanthomonas axonopodis pv. citri str. 306] Length = 139 Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G + ++ + + I + ++DLSA+ I + G I Sbjct: 12 QDTRQRVILTGRLDTHTYQDLDAALSPLLGTLIT--TLVLDLSALEYISSAGIRCIFKAR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + + + Sbjct: 70 KALATRQGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLAAMQR 119 >gi|296166749|ref|ZP_06849173.1| anti-anti-sigma factor [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897919|gb|EFG77501.1| anti-anti-sigma factor [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 122 Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G++V +G + + + + + ++DLSA+ + ++G +++ E Sbjct: 15 DGVSVVSVSGEIDLVTAPALEQAIGAVVADNPAA--LVIDLSAVEFLGSVGLKILAATYE 72 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 K V+ + Sbjct: 73 KLGNATGFAVVARGPATRRPI 93 >gi|239908720|ref|YP_002955462.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] gi|239798587|dbj|BAH77576.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] Length = 105 Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 30/85 (35%), Gaps = 6/85 (7%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + +G + + + + ++D+S + +D+ +++ E+ Sbjct: 16 VLTIALSGRFDIYTYEDFGKSYKDNLEPGV---KIVLDMSGLEYLDSSALGMLLMMRERA 72 Query: 66 HGKIKLQGV---STHIEQLFSLISF 87 G + S + ++ S + F Sbjct: 73 GGASADITIVMCSPEVAKILSTVKF 97 >gi|56963558|ref|YP_175289.1| stage II sporulation protein AA, anti-sigma F factor antagonist [Bacillus clausii KSM-K16] gi|56909801|dbj|BAD64328.1| stage II sporulation protein AA [Bacillus clausii KSM-K16] Length = 114 Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 36/82 (43%), Gaps = 6/82 (7%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + + R G E+ + + +++L+ ++ +D+ G +I+ + Sbjct: 13 VLLVRLEGELDHHSAKELRSQIEARLEN---IQHIVLNLAELSFMDSSGLGVILGRYKQI 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 + G++ + +S IE+LF + Sbjct: 70 KANGGEMVVCAISPTIERLFEM 91 >gi|320009233|gb|ADW04083.1| anti-anti-sigma factor [Streptomyces flavogriseus ATCC 33331] Length = 124 Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 ++ TV R G + V A+ ++DLS + D+ G +++ Sbjct: 10 QDAWTVLRIHGELDLVSSPVVRQSVHGAVAA--GRHDVVLDLSGVLFCDSSGVNVLIAAR 67 Query: 60 YFMEKYHGKIKLQ 72 M+ G+++L Sbjct: 68 RLMKSCGGRLRLI 80 >gi|24215134|ref|NP_712615.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45657389|ref|YP_001475.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196200|gb|AAN49633.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45600628|gb|AAS70112.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 109 Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFMEK 64 + GN +I + I K+ S ++DLS++ I + G +I + + Sbjct: 13 IIHLIGNLDVHNTHKIESAFMEQI-KTGNSRVIVLDLSSVEFISSAGLRIIVAALRICRE 71 Query: 65 YHGKIKLQGVSTHIEQLFSLISF 87 + +L G+ ++++F +I Sbjct: 72 KDVEFRLAGIKPAVKKVFEIIDM 94 >gi|145225514|ref|YP_001136192.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK] gi|315445867|ref|YP_004078746.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1] gi|145218000|gb|ABP47404.1| anti-sigma-factor antagonist [Mycobacterium gilvum PYR-GCK] gi|315264170|gb|ADU00912.1| anti-anti-sigma factor [Mycobacterium sp. Spyr1] Length = 125 Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + V G+ ++ + +A+ + IVD+S ++ + + G L++ Sbjct: 21 DGDLLVLHVTGDLDVLTAPTLSTHLDIALADAP--PVVIVDISDVSFLSSAGIGLLVETH 78 Query: 63 E 63 Sbjct: 79 R 79 >gi|21223746|ref|NP_629525.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|256785161|ref|ZP_05523592.1| anti-sigma factor antagonist [Streptomyces lividans TK24] gi|289769054|ref|ZP_06528432.1| anti-sigma factor antagonist [Streptomyces lividans TK24] gi|8568808|emb|CAB94557.1| putative anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|289699253|gb|EFD66682.1| anti-sigma factor antagonist [Streptomyces lividans TK24] Length = 107 Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHVELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+GV +++L Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|218782310|ref|YP_002433628.1| hypothetical protein Dalk_4481 [Desulfatibacillum alkenivorans AK-01] gi|218763694|gb|ACL06160.1| hypothetical protein Dalk_4481 [Desulfatibacillum alkenivorans AK-01] Length = 110 Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 36/90 (40%), Gaps = 5/90 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +S++ V+ G ++ + + + + +I+S + S + DT + + Sbjct: 20 VSQDMDGVYVLKGELTIHDLEYLKEFLE---SSAIRSGKVALSFSELVFADTASLQFLAS 76 Query: 61 FMEKYHGK--IKLQGVSTHIEQLFSLISFT 88 F + ++G+S +E++ + Sbjct: 77 FKRGMGIAHGLVIEGLSPEMEKILRISGLA 106 >gi|331696201|ref|YP_004332440.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] gi|326950890|gb|AEA24587.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] Length = 105 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 8/62 (12%), Positives = 21/62 (33%), Gaps = 2/62 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G G + + ++ ++ S +DL A+ +D+ G ++ + Sbjct: 14 GTVEIVVTGEIDLQNAGAVERRIHDMVDN--EARSVTIDLGALEYLDSAGLRVLFTLASR 71 Query: 65 YH 66 Sbjct: 72 LE 73 >gi|323700029|ref|ZP_08111941.1| anti-sigma-factor antagonist [Desulfovibrio sp. ND132] gi|323459961|gb|EGB15826.1| anti-sigma-factor antagonist [Desulfovibrio desulfuricans ND132] Length = 110 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G+ + GN + D V+ + + D + + I++ G +++ Sbjct: 8 EGGVVILAVDGNLDGEGTQALEDKVLALLENGTT--RLLFDFTGLDYINSSGLRVLVLAY 65 Query: 63 EKY---HGKIKLQGVSTHIEQLFSL 84 ++ G + + GV +I+++F + Sbjct: 66 QRLKKNSGTVAICGVKDYIQEVFEV 90 >gi|312128430|ref|YP_003993304.1| anti-sigma-factor antagonist [Caldicellulosiruptor hydrothermalis 108] gi|311778449|gb|ADQ07935.1| anti-sigma-factor antagonist [Caldicellulosiruptor hydrothermalis 108] Length = 102 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SENG+ V G + D + I+ S S+ I+D++ ++ ID+ G + + Sbjct: 9 ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SNDVIIDMNDVSYIDSTGLGVFVG 65 Query: 61 FMEKYHGKI 69 ++K K Sbjct: 66 ALKKSKQKG 74 >gi|206975687|ref|ZP_03236599.1| anti sigma b factor antagonist RsbV [Bacillus cereus H3081.97] gi|217958579|ref|YP_002337127.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH187] gi|229137789|ref|ZP_04266391.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-ST26] gi|206746149|gb|EDZ57544.1| anti sigma b factor antagonist RsbV [Bacillus cereus H3081.97] gi|217064775|gb|ACJ79025.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH187] gi|228645646|gb|EEL01878.1| Anti-sigma factor antagonist [Bacillus cereus BDRD-ST26] Length = 112 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ + +VD + + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIAGEKEVH--IVVDFTEVEYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K +GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNNGKLEFIGVSKRLKRLFDITGLTE 98 >gi|57116853|ref|YP_177802.1| hypothetical protein Rv1364c [Mycobacterium tuberculosis H37Rv] gi|148661154|ref|YP_001282677.1| hypothetical protein MRA_1373 [Mycobacterium tuberculosis H37Ra] gi|167969115|ref|ZP_02551392.1| sensory box protein/anti-anti-sigma factor [Mycobacterium tuberculosis H37Ra] gi|307083930|ref|ZP_07493043.1| hypothetical protein TMLG_03458 [Mycobacterium tuberculosis SUMu012] gi|1723069|sp|Q11034|Y1364_MYCTU RecName: Full=Uncharacterized protein Rv1364c/MT1410 gi|38490259|emb|CAE55380.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505306|gb|ABQ73115.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra] gi|308366418|gb|EFP55269.1| hypothetical protein TMLG_03458 [Mycobacterium tuberculosis SUMu012] Length = 653 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 608 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 609 ACDRARKQGTE 619 >gi|318041274|ref|ZP_07973230.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Synechococcus sp. CB0101] Length = 115 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 3/107 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G +F F G + + + + + Q ++DLS I ID+ G ++ Sbjct: 12 QDGCLLFSFTGQLDAYSEKQFLAFITEHLTSTPQP--LVIDLSKIDFIDSSGLGALVQMA 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + + + +Q + ++ + ++ + +P S Sbjct: 70 KHCNDQ-AMQFLVVGNARVVQTVKLVRLEQFLHLQPDLDTALGSIAA 115 >gi|167769466|ref|ZP_02441519.1| hypothetical protein ANACOL_00800 [Anaerotruncus colihominis DSM 17241] gi|167668434|gb|EDS12564.1| hypothetical protein ANACOL_00800 [Anaerotruncus colihominis DSM 17241] Length = 133 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S +G VF AG + ++ D ++ A++ S ++D + + + + G +++ Sbjct: 35 SRDGTAVFALAGRLDTTTSPQLHDVLLPALD---GSCDILLDFTGLNYVSSAGLRVLLAA 91 Query: 62 MEKYHGKI---KLQGVSTHIEQLFSLISFTH 89 ++ L+GV I ++F + F+ Sbjct: 92 QKQSKAAGVCMSLRGVCDEIMEVFDMTGFSD 122 >gi|311068944|ref|YP_003973867.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus atrophaeus 1942] gi|310869461|gb|ADP32936.1| anti-anti-sigma factor (antagonist of SpoIIAB) [Bacillus atrophaeus 1942] Length = 117 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V ++ +++L ++ +D+ G +I+ + Sbjct: 13 VLCIRLTGELDHHTAESLKQKVAKSLEDE-DIRHIVLNLEDLSFMDSSGLGVILGRYKQI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + + + + Q Sbjct: 72 KQIGGEMVVCAISPAVKRLFDMSGLFKIIRFEQSEQQ 108 >gi|256377807|ref|YP_003101467.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255922110|gb|ACU37621.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 121 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 2/107 (1%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G+ + R G + I +V+ ++++ + ++DL + + G L+ Sbjct: 12 SDGVLITRITGEVDAASTDPIRAEVLDQLDQAT--GALVLDLREVVFFGSSGISLLAESY 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + + V + + T KP + + Sbjct: 70 ARAQRRGLALAVVADQRAVLRPLQVTGMADSLLIKPTLDEAVEAVRA 116 >gi|226311981|ref|YP_002771875.1| anti-sigma-F factor antagonist [Brevibacillus brevis NBRC 100599] gi|226094929|dbj|BAH43371.1| anti-sigma-F factor antagonist [Brevibacillus brevis NBRC 100599] Length = 116 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + + V R G E+ + ++ ++ L+ +T +D+ G +I+ Sbjct: 9 TRQDVLVIRLQGELDHHTAEELRKKADDLL-RTSTIRHIVLSLADLTFMDSSGIGVIL 65 >gi|166710006|ref|ZP_02241213.1| hypothetical protein Xoryp_00595 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 96 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 8/88 (9%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66 G ++ + + ++ + +DL+ + +D+ G ++ + Sbjct: 13 LVITGVLDRAAVTAVWPQAIAQLD-----GARTLDLAGVQRLDSAGVAMLAELAARLRHT 67 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 68 GSGAVVGEASGLDELRAAYRLSPTLDFQ 95 >gi|288923128|ref|ZP_06417276.1| anti-sigma-factor antagonist [Frankia sp. EUN1f] gi|288345535|gb|EFC79916.1| anti-sigma-factor antagonist [Frankia sp. EUN1f] Length = 181 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 5/103 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + R G ++ A+++ Q VDL ++ +D G +++ ++ Sbjct: 53 RAIVRAHGEIDMATGEAFRAALIAALDQQPQ--MLTVDLDGVSFLDACGLGILVGVAKQA 110 Query: 66 HGK---IKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + I + HI LF L R + + Sbjct: 111 ARRSVPIVVISARPHIYHLFELTHLVDRLDVHAGPTPPATRLP 153 >gi|126650130|ref|ZP_01722363.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus sp. B14905] gi|169827280|ref|YP_001697438.1| anti-sigma F factor antagonist [Lysinibacillus sphaericus C3-41] gi|126593302|gb|EAZ87264.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Bacillus sp. B14905] gi|168991768|gb|ACA39308.1| Anti-sigma F factor antagonist (Stage II sporulation protein AA) [Lysinibacillus sphaericus C3-41] Length = 127 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62 V R G + +I + AI + I +L ++ +D+ G L+ M + Sbjct: 22 TVVIRLFGELDHHAVEQIRAKISAAIF-QGTVTTIIWNLEGLSFMDSSGVGLVLGRMREL 80 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 E G+ L S + ++F Sbjct: 81 EAVAGRTILLNPSPTMRKVFQF 102 >gi|18311032|ref|NP_562966.1| anti-sigma F factor antagonist [Clostridium perfringens str. 13] gi|110801393|ref|YP_696730.1| anti-sigma F factor antagonist [Clostridium perfringens ATCC 13124] gi|110801809|ref|YP_699331.1| anti-sigma F factor antagonist [Clostridium perfringens SM101] gi|168205858|ref|ZP_02631863.1| anti-sigma F factor antagonist [Clostridium perfringens E str. JGS1987] gi|168208752|ref|ZP_02634377.1| anti-sigma F factor antagonist [Clostridium perfringens B str. ATCC 3626] gi|168212913|ref|ZP_02638538.1| anti-sigma F factor antagonist [Clostridium perfringens CPE str. F4969] gi|168215677|ref|ZP_02641302.1| anti-sigma F factor antagonist [Clostridium perfringens NCTC 8239] gi|169343531|ref|ZP_02864530.1| anti-sigma F factor antagonist [Clostridium perfringens C str. JGS1495] gi|182624032|ref|ZP_02951820.1| anti-sigma F factor antagonist [Clostridium perfringens D str. JGS1721] gi|18145714|dbj|BAB81756.1| anti-sigma F factor antagonist [Clostridium perfringens str. 13] gi|110676040|gb|ABG85027.1| anti-sigma F factor antagonist [Clostridium perfringens ATCC 13124] gi|110682310|gb|ABG85680.1| anti-sigma F factor antagonist [Clostridium perfringens SM101] gi|169298091|gb|EDS80181.1| anti-sigma F factor antagonist [Clostridium perfringens C str. JGS1495] gi|170662623|gb|EDT15306.1| anti-sigma F factor antagonist [Clostridium perfringens E str. JGS1987] gi|170713098|gb|EDT25280.1| anti-sigma F factor antagonist [Clostridium perfringens B str. ATCC 3626] gi|170715524|gb|EDT27706.1| anti-sigma F factor antagonist [Clostridium perfringens CPE str. F4969] gi|177910925|gb|EDT73279.1| anti-sigma F factor antagonist [Clostridium perfringens D str. JGS1721] gi|182382199|gb|EDT79678.1| anti-sigma F factor antagonist [Clostridium perfringens NCTC 8239] Length = 111 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 + V G E+ + I++ ++D S +T +D+ G +I+ Sbjct: 9 GNVLVVSLIGELDHHSAEEVRVKIDDRISRE-NIRKLVLDFSGVTFMDSSGIGVII 63 >gi|320355255|ref|YP_004196594.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfobulbus propionicus DSM 2032] gi|320123757|gb|ADW19303.1| anti-anti-sigma regulatory factor, SpoIIAA [Desulfobulbus propionicus DSM 2032] Length = 111 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 5/86 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E V G + E V + +S IVD + I + G ++ Sbjct: 7 TEGSTLVLALTGKLDAVTAPEFEKKVNELLAA--ESCVLIVDCERLDYISSAGLRALLAT 64 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSL 84 ++ G+++ V+ + ++F + Sbjct: 65 AKRSKSRGGQVRCANVTGSVREVFDI 90 >gi|188532483|ref|YP_001906280.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99] gi|188027525|emb|CAO95372.1| Anti-sigma B factor antagonist [Erwinia tasmaniensis Et1/99] Length = 98 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65 G + + + + + +D+S + +D+ G L+++ + + Sbjct: 14 LCLIGELERETLLPLWQQ-----REQVMEHVESIDVSGLERVDSGGLALLVHLRQIAILH 68 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 + G++ + L +L + Sbjct: 69 GRNPRFTGINDRLNSLIALYNL 90 >gi|115523221|ref|YP_780132.1| anti-sigma-factor antagonist [Rhodopseudomonas palustris BisA53] gi|115517168|gb|ABJ05152.1| anti-sigma-factor antagonist [Rhodopseudomonas palustris BisA53] Length = 99 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 33/88 (37%), Gaps = 5/88 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + +G+ + + + + +++S + ID+ G +++ E Sbjct: 7 DNDATVALSGDLTFTDHVAFREIADRL--ARCSARTVTIEVSNLKFIDSAGLGMLLIARE 64 Query: 64 KY---HGKIKLQGVSTHIEQLFSLISFT 88 + + + L+G + ++F L F Sbjct: 65 EAVKSNRTLVLRGAQGQVNRMFELTKFA 92 >gi|303326936|ref|ZP_07357378.1| putative anti-sigma factor antagonist [Desulfovibrio sp. 3_1_syn3] gi|302862924|gb|EFL85856.1| putative anti-sigma factor antagonist [Desulfovibrio sp. 3_1_syn3] Length = 117 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 I + R G+ ++ E + I +VDLS +D G +++ K Sbjct: 12 IIILRLTGDILLADVVEFNQQMKNHIAA-PDIAQVVVDLSRAGRMDNAGLGVLVSISTKL 70 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRK 91 G+ + + + L+ + Sbjct: 71 QGRGRRLILLCPAPHVAQLLKDAEVE 96 >gi|284991070|ref|YP_003409624.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] gi|284064315|gb|ADB75253.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] Length = 114 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E+G AG + + + + + ++DLS I + + G +++ Sbjct: 16 AEDGAVTVTAAGEVDTFTAPLLRSVLDTQLQRHPT--ELVIDLSGIQFLGSAGLAVLVET 73 Query: 62 MEKYHGK 68 + + Sbjct: 74 HKSARDR 80 >gi|329939847|ref|ZP_08289148.1| anti-sigma factor antagonist [Streptomyces griseoaurantiacus M045] gi|329301417|gb|EGG45312.1| anti-sigma factor antagonist [Streptomyces griseoaurantiacus M045] Length = 107 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHAGLVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSGLDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+GV +++L Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|158320825|ref|YP_001513332.1| anti-sigma-factor antagonist [Alkaliphilus oremlandii OhILAs] gi|158141024|gb|ABW19336.1| anti-sigma-factor antagonist [Alkaliphilus oremlandii OhILAs] Length = 111 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + +F G I ++ I++ ++ + I DLS + +D+ G +I+ Sbjct: 9 ENTLIVQFDGELDHHFAESIRTELDDMISQQ-RAKNLIFDLSGMKFMDSSGIGVIIGRYK 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87 + K+ GK+ + V+ I+++F L Sbjct: 68 NISKFGGKVSVIHVADKIDKIFHLAGL 94 >gi|58579929|ref|YP_198945.1| hypothetical protein XOO0306 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84621934|ref|YP_449306.1| hypothetical protein XOO_0277 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424523|gb|AAW73560.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365874|dbj|BAE67032.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 96 Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 9/88 (10%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66 G ++ I + ++ + +DL+ + +D+ G ++ + Sbjct: 13 LVITGVLDRAAVTAIWPQAIAQLD-----GARTLDLAGVQRLDSAGVAMLAELAARLRHT 67 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 68 GSGAVVGEASGLDELRAAYRLSPTLDFQ 95 >gi|302867451|ref|YP_003836088.1| sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|315506139|ref|YP_004085026.1| sulfate transporter/antisigma-factor antagonist stas [Micromonospora sp. L5] gi|302570310|gb|ADL46512.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|315412758|gb|ADU10875.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora sp. L5] Length = 188 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 31/93 (33%) Query: 17 SPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVST 76 + ++ +S++ D +VDLS + ID+ G L++ + + + + Sbjct: 83 AHDLDPATAVRRALDERSLRDDMELVDLSGLEVIDSAGLSLLVRAHQDARRDGRRLCLLS 142 Query: 77 HIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + +++ + R Sbjct: 143 PSRFVLTVLHTMRLDGVFTVVDGRVPAPGPATR 175 >gi|302879180|ref|YP_003847744.1| Sulfate transporter/antisigma-factor antagonist STAS [Gallionella capsiferriformans ES-2] gi|302581969|gb|ADL55980.1| Sulfate transporter/antisigma-factor antagonist STAS [Gallionella capsiferriformans ES-2] Length = 107 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 14 NWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQG 73 + + ++ A+N D +DLS + E+DT G ++++ + K Sbjct: 13 DMTIYNAAVQKQTLLDALN---TCDELDLDLSQVAEMDTAGFQVLLLTKREAIKAGKAVH 69 Query: 74 VSTHIEQLFSLISF 87 ++ H + + ++ Sbjct: 70 LTAHSKAVTEVLDL 83 >gi|300787747|ref|YP_003768038.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299797261|gb|ADJ47636.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 100 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++G V AG +E + + + VDL+ ++ +D+ G ++ + Sbjct: 13 DDGDRVLSVAGEIDMSNAAEFGAALDGELAA---GAAVTVDLTGVSYLDSAGVAVLFDRV 69 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFT 88 ++ ++ + + ++ L Sbjct: 70 GEHDLRLVAPPLLDRVLRVSGLTQVA 95 >gi|229542545|ref|ZP_04431605.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1] gi|229326965|gb|EEN92640.1| anti-sigma-factor antagonist [Bacillus coagulans 36D1] Length = 124 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---M 62 +G + ++ + K+ ++DL+ ++ +D+ G +++ + Sbjct: 28 TLNVTISGEIDAFTAPKLREAFEPYEGKA--GLEVLIDLTNVSYMDSTGLGVLVGLFKSL 85 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 G + L G+S +++LF + + Sbjct: 86 RANGGMLTLTGLSDRLKRLFDITGLSD 112 >gi|115372701|ref|ZP_01460007.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1] gi|310823497|ref|YP_003955855.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1] gi|115370182|gb|EAU69111.1| stas domain, putative [Stigmatella aurantiaca DW4/3-1] gi|309396569|gb|ADO74028.1| anti-sigma factor antagonist [Stigmatella aurantiaca DW4/3-1] Length = 127 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 2/94 (2%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G ++ + +++ + + + A+VD S + +D G + ++ E + Sbjct: 22 TLCLEGELSEQDLHGVCEELFRRLQRGL--RQAVVDFSEVAHMDYRGVKGLVARAEGFRR 79 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 +S L +++ P S Sbjct: 80 AGGDIKLSGLSPYLAAILRAAGAHGAFEVYPHMS 113 >gi|297200444|ref|ZP_06917841.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] gi|197709566|gb|EDY53600.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] Length = 126 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + TV +G + V A+ + S ++DLS + D+ G +++ Sbjct: 12 QGEWTVLSVSGELDLVTSPVLRGRVHDAVAE--GRHSLVLDLSEVYFCDSSGVGVLIASR 69 Query: 60 YFMEKYHGKIKLQ 72 + GK++L Sbjct: 70 RLIHSCRGKLRLI 82 >gi|158312886|ref|YP_001505394.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec] gi|158108291|gb|ABW10488.1| anti-sigma-factor antagonist [Frankia sp. EAN1pec] Length = 142 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 4/117 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E G R AG + E+ + AI+ VD+ + D G +++ Sbjct: 17 EGGNQTLRLAGTVDVRSVGELRMLLHNAIDA--GRGPLHVDVGGLELGDHAGVGVLLGGA 74 Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS--FTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + + L L++ R P R H +G Sbjct: 75 RRARALGRTLVLVDASAALGRLLAIDRLGRLLRVQIAPDRLTAVPPGAGGHGTVGHA 131 >gi|76810142|ref|YP_335063.1| hypothetical protein BURPS1710b_3700 [Burkholderia pseudomallei 1710b] gi|76579595|gb|ABA49070.1| hypothetical protein BURPS1710b_3700 [Burkholderia pseudomallei 1710b] Length = 636 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 3/76 (3%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKL 71 +G S A + I++ + VD A+ + D+ +++ + + Sbjct: 553 SGA-TLTHAS--AKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVT 609 Query: 72 QGVSTHIEQLFSLISF 87 + +L SL Sbjct: 610 LDIENLPPKLASLAQA 625 >gi|254231615|ref|ZP_04924942.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|124600674|gb|EAY59684.1| conserved hypothetical protein [Mycobacterium tuberculosis C] Length = 653 Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 553 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGITPVTIDLSAVTHLGSAGVGALAA 608 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 609 ACDRARKQGTE 619 >gi|320107759|ref|YP_004183349.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4] gi|319926280|gb|ADV83355.1| anti-anti-sigma factor [Terriglobus saanensis SP1PR4] Length = 115 Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 +GITV +G E S D + + Q S +++L ++ +D+ G ++ Sbjct: 11 DGITVLDLSGRITLGEGSVTLRDAIRDLINKGQ-KSILLNLGDVSYLDSSGLGELVTAYT 69 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSL 84 ++ G++KL ++ ++ L + Sbjct: 70 SVKNSGGELKLLNLTKKVQDLLQI 93 >gi|56420845|ref|YP_148163.1| anti-sigma F factor antagonist [Geobacillus kaustophilus HTA426] gi|261417854|ref|YP_003251536.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61] gi|297529522|ref|YP_003670797.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3] gi|319767334|ref|YP_004132835.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC52] gi|50513738|pdb|1TH8|B Chain B, Crystal Structures Of The Adp And Atp Bound Forms Of The Bacillus Anti-Sigma Factor Spoiiab In Complex With The Anti-Anti-Sigma Spoiiaa: Inhibitory Complex With Adp, Crystal Form Ii gi|50513740|pdb|1THN|B Chain B, Crystal Structures Of The Adp And Atp Bound Forms Of The Bacillus Anti-Sigma Factor Spoiiab In Complex With The Anti-Anti-Sigma Spoiiaa: Inhibitory Complex With Adp, Crystal Form I gi|50513742|pdb|1THN|D Chain D, Crystal Structures Of The Adp And Atp Bound Forms Of The Bacillus Anti-Sigma Factor Spoiiab In Complex With The Anti-Anti-Sigma Spoiiaa: Inhibitory Complex With Adp, Crystal Form I gi|56380687|dbj|BAD76595.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Geobacillus kaustophilus HTA426] gi|261374311|gb|ACX77054.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61] gi|297252774|gb|ADI26220.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3] gi|317112200|gb|ADU94692.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC52] Length = 116 Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 + + R +G E+ + V + +++L +T +D+ G +I+ Sbjct: 12 DVLIVRLSGELDHHTAEELREQVTDVLENR-AIRHIVLNLGQLTFMDSSGLGVILGRYKQ 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 ++ G++ + VS +++LF + Sbjct: 71 IKNVGGQMVVCAVSPAVKRLFDM 93 >gi|330877176|gb|EGH11325.1| STAS domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964021|gb|EGH64281.1| STAS domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 101 Score = 37.3 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + G + A+ KS +D S + + ++G L++ FM Sbjct: 14 LKLTGVLDYRTGPHLRKQ-GAALIKSGDLSELTLDCSGVEKSSSVGLALLLAFMRDARDA 72 Query: 69 IKLQGVSTHIEQLFSLIS 86 K V E + + Sbjct: 73 GKSITVQALPEDMRQIAR 90 >gi|308375442|ref|ZP_07443933.2| hypothetical protein TMGG_01936 [Mycobacterium tuberculosis SUMu007] gi|308376702|ref|ZP_07439737.2| hypothetical protein TMHG_00552 [Mycobacterium tuberculosis SUMu008] gi|308346289|gb|EFP35140.1| hypothetical protein TMGG_01936 [Mycobacterium tuberculosis SUMu007] gi|308350217|gb|EFP39068.1| hypothetical protein TMHG_00552 [Mycobacterium tuberculosis SUMu008] Length = 580 Score = 37.3 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 480 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 535 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 536 ACDRARKQGTE 546 >gi|302558813|ref|ZP_07311155.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302476431|gb|EFL39524.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 156 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 9/107 (8%), Positives = 26/107 (24%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G +S D + + + D++ + L+ Sbjct: 46 VLVLSGPLTGDGVSGPCDALRTLLEGGGPGRVVVCDVAGLGPPGLAAVNLLARLQLTARR 105 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 + L +L+ + +P++ + Sbjct: 106 SGGRIRLRDPSAALCALLDLVGLRFETEGQPEQREPPLGVQEAVEAR 152 >gi|312794379|ref|YP_004027302.1| anti-sigma-factor antagonist [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181519|gb|ADQ41689.1| anti-sigma-factor antagonist [Caldicellulosiruptor kristjanssonii 177R1B] Length = 102 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SENG+ V G + D + I+ S S I+D++ ++ ID+ G + + Sbjct: 9 ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIIDMNDVSYIDSTGLGVFVG 65 Query: 61 FMEKYHGKI 69 ++K K Sbjct: 66 ALKKSKQKG 74 >gi|292486815|ref|YP_003529685.1| hypothetical protein EAMY_0327 [Erwinia amylovora CFBP1430] gi|292900787|ref|YP_003540156.1| hypothetical protein EAM_3093 [Erwinia amylovora ATCC 49946] gi|291200635|emb|CBJ47767.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946] gi|291552232|emb|CBA19269.1| Uncharacterized protein yrbB [Erwinia amylovora CFBP1430] Length = 98 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 33/82 (40%), Gaps = 8/82 (9%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65 R G + + + +++ +D+SA+ +D+ G L+++ + Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMQHVETIDVSALQRVDSGGLALLVHLQQIAIDN 68 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 K + G++ + L +L + Sbjct: 69 GRKPRFSGITDKLNSLITLYNL 90 >gi|222528458|ref|YP_002572340.1| anti-sigma-factor antagonist [Caldicellulosiruptor bescii DSM 6725] gi|312623244|ref|YP_004024857.1| anti-sigma-factor antagonist [Caldicellulosiruptor kronotskyensis 2002] gi|222455305|gb|ACM59567.1| anti-sigma-factor antagonist [Caldicellulosiruptor bescii DSM 6725] gi|312203711|gb|ADQ47038.1| anti-sigma-factor antagonist [Caldicellulosiruptor kronotskyensis 2002] Length = 102 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SENG+ V G + D + I+ S S I+D++ ++ ID+ G + + Sbjct: 9 ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIIDMNDVSYIDSTGLGVFVG 65 Query: 61 FMEKYHGKI 69 ++K K Sbjct: 66 ALKKSKQKG 74 >gi|220921550|ref|YP_002496851.1| sulphate transporter [Methylobacterium nodulans ORS 2060] gi|219946156|gb|ACL56548.1| sulphate transporter [Methylobacterium nodulans ORS 2060] Length = 568 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 8/119 (6%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S+ + V+R +G + + + + + + ++DLS + +D+ A I F Sbjct: 457 SDPNVIVYRISGAFFFGAAATVGAALDRLGER---PKAYVIDLSEVPLLDSTAAATIEGF 513 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 K + V+ + ++ + PQ F + + + G+ V+ Sbjct: 514 ARKAGRQGATVTVAGARPPIRRVLLTHGVR-----PPQVRFRSSVAEAVREAGGRATVE 567 >gi|312170883|emb|CBX79142.1| Uncharacterized protein yrbB [Erwinia amylovora ATCC BAA-2158] Length = 98 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 33/82 (40%), Gaps = 8/82 (9%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KY 65 R G + + + +++ +D+SA+ +D+ G L+++ + Sbjct: 14 LRLIGELERETLLPLWQQ-----REAVMQHVETIDVSALQRVDSGGLALLVHLQQIAIDN 68 Query: 66 HGKIKLQGVSTHIEQLFSLISF 87 K + G++ + L +L + Sbjct: 69 GRKPRFSGITDKLNSLITLYNL 90 >gi|188579089|ref|YP_001916018.1| hypothetical protein PXO_03207 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523541|gb|ACD61486.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 91 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 9/88 (10%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH-- 66 G ++ I + ++ + +DL+ + +D+ G ++ + Sbjct: 8 LVITGVLDRAAVTAIWPQAIAQLD-----GARTLDLAGVQRLDSAGVAMLAELAARLRHT 62 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G + G ++ +++L + + + Sbjct: 63 GSGAVVGEASGLDELRAAYRLSPTLDFQ 90 >gi|134100288|ref|YP_001105949.1| hypothetical protein SACE_3753 [Saccharopolyspora erythraea NRRL 2338] gi|291007867|ref|ZP_06565840.1| hypothetical protein SeryN2_25361 [Saccharopolyspora erythraea NRRL 2338] gi|133912911|emb|CAM03024.1| hypothetical protein SACE_3753 [Saccharopolyspora erythraea NRRL 2338] Length = 155 Score = 37.3 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ V G + + + + + + + ++DLS +T + G EL+++ + Sbjct: 52 GVVVVSMQGEIDLACVPRLTELIRQRLTAA-SLRAVVLDLSGVTYSSSSGLELLIHAQRR 110 Query: 65 YHGKI 69 + Sbjct: 111 AEHRG 115 >gi|302531664|ref|ZP_07284006.1| predicted protein [Streptomyces sp. AA4] gi|302440559|gb|EFL12375.1| predicted protein [Streptomyces sp. AA4] Length = 117 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G ++ + + + S + DL+ +T D+ ++++ + + Sbjct: 26 VVVTGELDLLTSPQLQEAL-AGLIADKNSRRVVADLTGVTFFDSSALNVVLHAQRQAGEQ 84 Query: 69 IKLQGV--STHIEQLFSLISFTHRKKIKNQKPQ 99 V S + ++ L + + P Sbjct: 85 DVELEVVPSPAVSRVIELTGVAEHLSVSEEPPA 117 >gi|464791|sp|P35147|SP2AA_BACME RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein AA gi|580788|emb|CAA45286.1| spoIIAA [Bacillus megaterium] Length = 116 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + + R G E+ + AI K S I++L +T +D+ G +I+ ++ Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70 Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84 G++ + +S IE+LF++ Sbjct: 71 VHNNGGEMVVCAISPAIERLFNM 93 >gi|254387241|ref|ZP_05002504.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194346049|gb|EDX27015.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 114 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S V G + + + + A ++ ++D S+IT D+ L++ Sbjct: 18 SAGSGWVVAARGELDQDTLGPLEEALASAADRH---RLVVLDASSITFGDSSFLNLLLRL 74 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 +I G + +LF+L + + Sbjct: 75 HHATGLRIAAPG--EQLRRLFALTGADTVLSVHPSVEE 110 >gi|254380860|ref|ZP_04996226.1| anti-sigma factor antagonist [Streptomyces sp. Mg1] gi|194339771|gb|EDX20737.1| anti-sigma factor antagonist [Streptomyces sp. Mg1] Length = 112 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 10/101 (9%), Positives = 26/101 (25%), Gaps = 2/101 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G +++ D + K ++DL+ + D+ G ++ Sbjct: 14 GPVVEVTGELDYDTSADLRDLLAALPLK--PGQRLVLDLARMEFCDSSGISTLIVARNHA 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNS 106 ++ ++ +I P Sbjct: 72 QSAGADVALAAVPASTLRVLRVVGLDQIFPLHPHAESAIGP 112 >gi|220919629|ref|YP_002494932.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060] gi|219952049|gb|ACL62440.1| hypothetical protein Mnod_8294 [Methylobacterium nodulans ORS 2060] Length = 235 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 31/111 (27%), Gaps = 12/111 (10%) Query: 45 SAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFY 104 + + +DT + + + G ++ L I+ + +P F Sbjct: 78 ARLFALDTA----LRRTIRALWRTCRYPGDPPYLAGLLHQIA---VGRFDPHRPPWLFHP 130 Query: 105 NSFKNLHYHIGKKIVKFI-----NDSCSQAHILGLVISNTGEFCASSYKFK 150 +F IG++ V + LG I + + Sbjct: 131 ATFDAAFRRIGRRTVGGGPKTAPANELVFRGNLGAGILFLTSRVRLIDRRR 181 >gi|49481541|ref|YP_035250.1| anti-sigma B factor antagonist (RsbV) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49333097|gb|AAT63743.1| anti-sigma B factor antagonist (RsbV) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 111 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 8 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--MVVDFTEVEYMDSTGLGVFIA 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K +GK++ GVS +++LF + T Sbjct: 66 LLKAVKKNNGKLEFIGVSKRLKRLFDITGLTE 97 >gi|296170351|ref|ZP_06851942.1| sensory box protein/anti-anti-sigma factor [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895074|gb|EFG74793.1| sensory box protein/anti-anti-sigma factor [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 654 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E G V +G+ S S + + A+ +DLSA+T++ + G + Sbjct: 554 VAEPGRIVV--SGDVDSHTASTLDRQI--AVESRSGIAPLTIDLSAVTQLGSAGVSALAA 609 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 610 ARDRAQRQGSE 620 >gi|297588050|ref|ZP_06946694.1| anti-sigma B factor antagonist [Finegoldia magna ATCC 53516] gi|297574739|gb|EFH93459.1| anti-sigma B factor antagonist [Finegoldia magna ATCC 53516] Length = 110 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + R G+ E DD++ K+ + +D + ++ ID+ G ++ + Sbjct: 21 IVRIQGDLDINTCDEFRDDLLEEYKKNPKD--IRIDATDLSFIDSTGLGALIKVYNELR 77 >gi|153955770|ref|YP_001396535.1| hypothetical protein CKL_3156 [Clostridium kluyveri DSM 555] gi|219856137|ref|YP_002473259.1| hypothetical protein CKR_2794 [Clostridium kluyveri NBRC 12016] gi|146348628|gb|EDK35164.1| SpoIIAA [Clostridium kluyveri DSM 555] gi|219569861|dbj|BAH07845.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 111 Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Query: 13 GNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEKYHGKI 69 G E+ + + ++ + I+D S ++ +D+ G +++ + GK+ Sbjct: 18 GELDHHSTEEVRNKIDNQLD-VEGINKLILDFSQVSFMDSSGIGVVIGRYKKLNAKKGKV 76 Query: 70 KLQGVSTHIEQLFSL 84 + GVS + ++F L Sbjct: 77 CIVGVSPSVRRVFEL 91 >gi|383706|prf||1904152A spoIIAA gene Length = 116 Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + + R G E+ + AI K S I++L +T +D+ G +I+ ++ Sbjct: 12 DVLLVRLTGELDHHTAEELRSKITEAIEKESIS-HLILNLQHLTFMDSSGLGVILGRYKQ 70 Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84 G++ + +S IE+LF++ Sbjct: 71 VHNNGGEMVVCAISPAIERLFNM 93 >gi|23098083|ref|NP_691549.1| positive regulator of sigma-B activity [Oceanobacillus iheyensis HTE831] gi|22776308|dbj|BAC12584.1| positive regulator of sigma-B activity (anti-anti-sigma factor) [Oceanobacillus iheyensis HTE831] Length = 110 Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 NG V + AG + ++ + ++ + S S++ VDL + +D+ G + + + Sbjct: 10 SNGQVVLKVAGEIDAYTAPKLKETLLPLVKDS--SNNIQVDLEEVNYMDSTGLGVFVSAL 67 Query: 63 EK 64 + Sbjct: 68 KA 69 >gi|237798609|ref|ZP_04587070.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021462|gb|EGI01519.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. oryzae str. 1_6] Length = 101 Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + G ++ A+ KS +D S + + ++G L++ FM Sbjct: 14 LKLIGVLDYRTGPQLRKQ-GAALIKSGDLPELTLDCSGVEKSSSVGLALLLAFMRDARDA 72 Query: 69 IKLQGVSTHIEQLFSLIS 86 K V + E + + Sbjct: 73 GKSITVRSLPEDMRQIAR 90 >gi|297193756|ref|ZP_06911154.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] gi|197723165|gb|EDY67073.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] Length = 125 Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + TV G + V A+ ++DLS + D+ G +++ Sbjct: 11 QGSWTVLHVRGELDLVSSPVVRQRVHDAVAA--GHHDVVLDLSEVFFCDSSGVGVLIAAR 68 Query: 60 YFMEKYHGKIKLQ 72 M G+++L Sbjct: 69 RLMRSCRGRLRLI 81 >gi|28871578|ref|NP_794197.1| STAS domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213966601|ref|ZP_03394752.1| STAS domain protein [Pseudomonas syringae pv. tomato T1] gi|301383111|ref|ZP_07231529.1| STAS domain protein [Pseudomonas syringae pv. tomato Max13] gi|302058650|ref|ZP_07250191.1| STAS domain protein [Pseudomonas syringae pv. tomato K40] gi|302133827|ref|ZP_07259817.1| STAS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854830|gb|AAO57892.1| STAS domain protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213928451|gb|EEB61995.1| STAS domain protein [Pseudomonas syringae pv. tomato T1] gi|331016697|gb|EGH96753.1| STAS domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 101 Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + G + A+ KS +D S + + ++G L++ FM Sbjct: 14 LKLTGVLDYRTGPHLRKQ-GAALIKSGDLSELTLDCSGVEKSSSVGLALLLAFMRDARDA 72 Query: 69 IKLQGVSTHIEQLFSLIS 86 K V + E + + Sbjct: 73 GKSITVQSLPEDMRQIAR 90 >gi|320104165|ref|YP_004179756.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644] gi|319751447|gb|ADV63207.1| anti-sigma-factor antagonist [Isosphaera pallida ATCC 43644] Length = 111 Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 36 QSDSAIVDLSAITEIDTIGAELIMYFMEKY---HGKIKLQGVSTHIEQLFSLISFT 88 + D+S I +D+ G +++ + + G ++L G+S + LF L+ Sbjct: 39 SHSHVVFDMSKIAFVDSSGCGVLLSCLRELNSRGGDLRLCGLSPQVRSLFELVRMH 94 >gi|157692846|ref|YP_001487308.1| stage II sporulation anti-anti-sigma factor [Bacillus pumilus SAFR-032] gi|157681604|gb|ABV62748.1| stage II sporulation anti-anti-sigma factor [Bacillus pumilus SAFR-032] Length = 117 Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 38/96 (39%), Gaps = 4/96 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V + +++L+ +T +D+ G +I+ + Sbjct: 13 VLCIRLTGELDHHSAETLRQKVTNYLETE-DIRHIVLNLADLTFMDSSGLGVILGRYKEI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 ++ G++ + +S + +LF + +++ + Sbjct: 72 KQLGGEMVVCAISPAVNRLFDMSGLFKIIRMEPSEQ 107 >gi|289749920|ref|ZP_06509298.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289690507|gb|EFD57936.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis T92] Length = 552 Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E+G V R G+ S + + + A+ +DLSA+T + + G + Sbjct: 452 LVESGRIVVR--GDVDSTTAATLDRQI--AVESRSGIAPVTIDLSAVTHLGSAGVGALAA 507 Query: 61 FMEKYHGKIKL 71 ++ + Sbjct: 508 ACDRARKQGTE 518 >gi|138895882|ref|YP_001126335.1| anti-sigma F factor antagonist [Geobacillus thermodenitrificans NG80-2] gi|196248771|ref|ZP_03147471.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16] gi|134267395|gb|ABO67590.1| Anti-sigma F factor antagonist (stage II sporulation protein AA) [Geobacillus thermodenitrificans NG80-2] gi|196211647|gb|EDY06406.1| anti-sigma-factor antagonist [Geobacillus sp. G11MC16] Length = 116 Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 + + R +G E+ + V + +++L +T +D+ G +I+ Sbjct: 12 DVLIVRLSGELDHHTAEELREKVTDVLENR-TVRHIVLNLGQLTFMDSSGLGVILGRYKQ 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSL 84 ++ G++ + VS +++LF + Sbjct: 71 IKNVGGQMVVCAVSPTVKRLFDM 93 >gi|319950629|ref|ZP_08024534.1| anti-sigma-factor antagonist [Dietzia cinnamea P4] gi|319435704|gb|EFV90919.1| anti-sigma-factor antagonist [Dietzia cinnamea P4] Length = 111 Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 V + G + + + ++ + +VDL + ID+ G ++ Sbjct: 10 GETVVVQPTGRLNMVAAPRLREQLRELVD--GGARRLVVDLGSTEFIDSSGLGALISGLK 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 + G +++ + + ++ +L Sbjct: 68 AARQAGGDLRIAAPTEQVRRVLTL 91 >gi|300785174|ref|YP_003765465.1| anti-sigma factor [Amycolatopsis mediterranei U32] gi|299794688|gb|ADJ45063.1| putative anti-sigma factor [Amycolatopsis mediterranei U32] Length = 141 Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 10/106 (9%), Positives = 32/106 (30%), Gaps = 5/106 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYF 61 G + R G + ++ + + + ++DLS + +D G + + Sbjct: 34 GAVMVRIRGALDADSAPQVRSAL--STWAHRRFPVLVLDLSEVDFLDGAGLAALGGIQAW 91 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSF 107 + + +++ + + S ++ P Sbjct: 92 AARENATLRVVTGDNRVVRRALSASGLDHALNVSRLPSGWERATEI 137 >gi|256378441|ref|YP_003102101.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255922744|gb|ACU38255.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 127 Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 5/79 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF--- 61 V R +G + + ++ ++++ + +VDL A+T G L++ Sbjct: 15 DAVVVRVSGELDASTTGPLRARLLDEVSRAPSA--LVVDLGAVTFCSAAGLSLLLATTAD 72 Query: 62 MEKYHGKIKLQGVSTHIEQ 80 E+ + G + + Sbjct: 73 AERLGVPWAVVGAQRAVRR 91 >gi|261855377|ref|YP_003262660.1| anti-sigma-factor antagonist [Halothiobacillus neapolitanus c2] gi|261835846|gb|ACX95613.1| anti-sigma-factor antagonist [Halothiobacillus neapolitanus c2] Length = 117 Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 28/78 (35%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G+ I ++D + + + L ++ IDT G ++ + + + Sbjct: 26 VRVQGDLLRSSIESLSDLSLPMPDGQTPGTRLEIALGSVGRIDTAGVAFLLGWQAEAAAQ 85 Query: 69 IKLQGVSTHIEQLFSLIS 86 + + + +++ Sbjct: 86 SVTVRYTHPPKAMRAMMR 103 >gi|300787454|ref|YP_003767745.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299796968|gb|ADJ47343.1| putative anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 152 Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 2/81 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V G + D + ++ + Q +VDLS + ++T G ++++ Sbjct: 44 SGTLVATVDGEADLCTAPMLHDVLEASLGLTPQ--RIVVDLSLVRFLNTAGVQVLLDAHR 101 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 + L+ V+T L L Sbjct: 102 RATPGTDLRLVATTRATLRPL 122 >gi|299538360|ref|ZP_07051643.1| anti-sigma F factor antagonist [Lysinibacillus fusiformis ZC1] gi|298725947|gb|EFI66539.1| anti-sigma F factor antagonist [Lysinibacillus fusiformis ZC1] Length = 117 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62 V R G + +I + AI + I +L ++ +D+ G L+ M + Sbjct: 12 TVVIRLFGELDHHAVEQIRAKISAAIF-QGTVTTIIWNLEGLSFMDSSGVGLVLGRMREL 70 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 E G+ L S + ++F Sbjct: 71 EAVAGRTILLNPSPTMRKVFQF 92 >gi|269794835|ref|YP_003314290.1| anti-anti-sigma regulatory factor [Sanguibacter keddieii DSM 10542] gi|269097020|gb|ACZ21456.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Sanguibacter keddieii DSM 10542] Length = 111 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 6/99 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E G +V + G S + + + A+++++ ++D S + ID+ G ++ Sbjct: 14 LEEPGHSVLQMWGEVDSALRPDASGALARALDRNLP---VVIDTSKVDFIDSTGIAFLVQ 70 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 ++ L + + S++ + Sbjct: 71 VCTIGRDEGLEVSLVDPPAVVSDVLSMLGVDDLVTHRAP 109 >gi|254823324|ref|ZP_05228325.1| hypothetical protein MintA_25574 [Mycobacterium intracellulare ATCC 13950] Length = 655 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E G V +G+ S S + + A+ +DLSA+T + + G + Sbjct: 555 VTEPGRIVV--SGDVDSNTASTLDRQI--AVESRSGVAPLTIDLSAVTHLGSSGVSALAA 610 Query: 61 FMEKYHGKIKL 71 E+ + Sbjct: 611 ARERAQRQGSE 621 >gi|114566159|ref|YP_753313.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337094|gb|ABI67942.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 110 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V + +G ++ ++ I Q + +++L ++ ID+ G +I+ ++ Sbjct: 11 TLVVKISGELDLLVSEKLRREIDSKIQSQ-QVKNLVLNLEKVSFIDSSGLGVIIGRYKRM 69 Query: 66 ---HGKIKLQGVSTHIEQLF 82 +G++ + G S +E++ Sbjct: 70 NAGNGRMYIVGASPAVEKIL 89 >gi|23014625|ref|ZP_00054432.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum magnetotacticum MS-1] Length = 101 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 28/85 (32%), Gaps = 2/85 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G V + + + + + + + VDL + +D+ G +++ + Sbjct: 9 GGQRVLVLRDQLTDADRAVMETVIPQLLAGGV--KTVCVDLERLDYMDSAGLGMLLTMRD 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 + +S + L++ Sbjct: 67 RAGKAGVQIRLSKPRGDVKDLLALA 91 >gi|319945234|ref|ZP_08019496.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC 51599] gi|319741804|gb|EFV94229.1| hypothetical protein HMPREF0551_2344 [Lautropia mirabilis ATCC 51599] Length = 418 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 21 SEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGV--STHI 78 +++ + VD S +T ID IGA+L++ + + + Sbjct: 185 AQVVKQTEQMTRAIQRKRQLRVDFSRVTSIDMIGADLLLRTFRDFRKARHELTICGVEAL 244 Query: 79 EQLFSLISFTHRKKIKNQ 96 E+ S+++ + R+ Sbjct: 245 EKALSVMTESGRRDPDEH 262 >gi|309789500|ref|ZP_07684083.1| WecB/TagA/CpsF family glycosyl transferase [Oscillochloris trichoides DG6] gi|308228466|gb|EFO82111.1| WecB/TagA/CpsF family glycosyl transferase [Oscillochloris trichoides DG6] Length = 542 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 6/109 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF---MEKY 65 G AD+ ++ S I++L+ T +D+ +++ + Sbjct: 315 LVLQGRLDIDNQDAFADEANRLLDDSPY---LILNLAEATFLDSSALGVLVALANRAHRA 371 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 G + L + I+ LF L+ ++ Sbjct: 372 GGALWLVAIPPQIQSLFKLVRLDTFFEVYPDADAVEVKRRQVPQPVAPQ 420 >gi|253577388|ref|ZP_04854704.1| anti-sigma-B factor antagonist [Paenibacillus sp. oral taxon 786 str. D14] gi|251843188|gb|EES71220.1| anti-sigma-B factor antagonist [Paenibacillus sp. oral taxon 786 str. D14] Length = 112 Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAEL---IM 59 ENG+ G + V+ + I +++L + ID+ G + I+ Sbjct: 16 ENGVCTVSLRGELDL-SAAPDFRKVMDPL-VGIDDADLVLNLKELKYIDSTGIGIFLSIL 73 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 + + +Q V HI +LF + Sbjct: 74 KARQGMNSSFYVQEVPDHIRKLFEM 98 >gi|153003877|ref|YP_001378202.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5] gi|152027450|gb|ABS25218.1| hypothetical protein Anae109_1009 [Anaeromyxobacter sp. Fw109-5] Length = 109 Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 5/104 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E G TV R +G + +E+A + + + ++D S + E +G + + Sbjct: 11 TEGGRTVIRLSGVFDHASAAELAQRL-----QQEAATEVVLDFSLVREFADLGVAALAHG 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + ++ ++G+ H ++F + Sbjct: 66 LAGGRQRLLMRGLRQHQLRIFRYFGVDVEALQSAATSAERVPLH 109 >gi|108804526|ref|YP_644463.1| anti-sigma-factor antagonist [Rubrobacter xylanophilus DSM 9941] gi|108765769|gb|ABG04651.1| anti-sigma-factor antagonist [Rubrobacter xylanophilus DSM 9941] Length = 125 Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSI--QSDSAIVDLSAITEIDTIGAELIM 59 V + +G + + + A + + + +VD+S + +D+ G ++ Sbjct: 20 VVKVSGELELLTAHRFREALEEATASAGDSRPRTVVVDMSNLEFMDSSGVSALL 73 >gi|23016234|ref|ZP_00055992.1| COG1366: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum magnetotacticum MS-1] Length = 101 Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 30/91 (32%), Gaps = 3/91 (3%) Query: 3 ENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G +V G + + ++ ++S ++ ID++G L+ Sbjct: 7 DEGTSVHVSLDGQLNFAANEDFQSLLSQL--GGLKGRKVTFEMSGLSHIDSVGLGLLYIA 64 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 E ++ + + ++ T K Sbjct: 65 REDLAENGSSINLAHPRDNVLRMLELTEAHK 95 >gi|302556733|ref|ZP_07309075.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302474351|gb|EFL37444.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 113 Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++ +G V G +++ V A I+DLS +T D+ G +++ Sbjct: 14 VTPSGPYVLDVVGELDHHTAHFLSEAVNEA---PFDDHGVILDLSGLTYCDSTGITVLIT 70 Query: 61 FMEK---YHGKIKLQGVSTHIEQLFSLISFTH 89 +K + L GV+ ++ ++ Sbjct: 71 AHQKSQAAGSPLVLAGVNPDQMRVLQVVGLDQ 102 >gi|150387861|ref|YP_001317910.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF] gi|149947723|gb|ABR46251.1| anti-sigma-factor antagonist [Alkaliphilus metalliredigens QYMF] Length = 105 Score = 37.3 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E + + AG ++ + + I + + ++ +D + ID+ G +++ + Sbjct: 12 EENLWTVQLAGEVDIYTAGQLKEAFIKMIEE--RKETIKIDCEELVYIDSTGLGVLIGAL 69 Query: 63 EKYHGKIKLQ---GVSTHIEQLFSL 84 ++ + K + I++L ++ Sbjct: 70 KRLKQEKKEIMLFNIKPSIKKLLNI 94 >gi|302542666|ref|ZP_07295008.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302460284|gb|EFL23377.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 1001 Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 25/239 (10%), Positives = 67/239 (28%), Gaps = 21/239 (8%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMS 204 + + +L + + V + V+ F T + L ++ Sbjct: 33 RVGRPSRRVRTLFMTLGVLAVLAMLFVMFAGFWTDWLW----YRSLHYSSVFSTTLRTKI 88 Query: 205 ILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALI 264 L ++ AV + + + +M + ++ MG+ + + + AL+ Sbjct: 89 GLFFVFGLLMSAAVGVNIWLAHRLRPPLSAMSMEQQSLDRYRMGIAPFKKWVLLAVTALV 148 Query: 265 ISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANI-FTGLIKAPFMACA 323 L A+ + ++ ++ + + + A Sbjct: 149 ----GLIAGASAAGQWRLWLLWVNSVPFGQKDAEFHKDVAFFAFDLPWYRFLLSFGFAAT 204 Query: 324 I-GIVAM------KEGFAV-GVHSNSLGKKVTT-CVVQSISIVIIIDSLFAIFYFAIGI 373 + ++A G V + + G V + V + A + G+ Sbjct: 205 VLSLIAAALVHYLYGGLRVTSPGARATGAATGHLSV---LVGVFVALKAVAYWLDRYGL 260 >gi|187778267|ref|ZP_02994740.1| hypothetical protein CLOSPO_01859 [Clostridium sporogenes ATCC 15579] gi|187771892|gb|EDU35694.1| hypothetical protein CLOSPO_01859 [Clostridium sporogenes ATCC 15579] Length = 111 Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + G E+ + + +++ + I+D S + +D+ G +++ +K Sbjct: 10 DKLIVTMTGELDHHSAEEVRNIIDDRLDRE-NLNKLILDFSKVNFMDSSGIGVVIGRYKK 68 Query: 65 Y---HGKIKLQGVSTHIEQLFSL 84 +GK+ L V + ++F L Sbjct: 69 LSLRNGKVCLTNVQEAVRRVFEL 91 >gi|312194216|ref|YP_004014277.1| anti-sigma-factor antagonist [Frankia sp. EuI1c] gi|311225552|gb|ADP78407.1| anti-sigma-factor antagonist [Frankia sp. EuI1c] Length = 113 Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 32/84 (38%), Gaps = 2/84 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E TV G ++ + ++ ++ S +VD+ + +D+ G +++ + Sbjct: 10 EGDHTVVVVGGEIDVYTAPKLREQLIDLVSA--GSYHLVVDMEGVEFLDSTGLGVLVGGL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86 ++ + E++ + Sbjct: 68 KRVRAHDGSLRLVCTQERILKIFR 91 >gi|256833627|ref|YP_003162354.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603] gi|256687158|gb|ACV10051.1| anti-sigma-factor antagonist [Jonesia denitrificans DSM 20603] Length = 126 Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 3/89 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V G I V + +D +VD + ID+ G ++ + Sbjct: 25 AVIVLRGEIDID-IQSCFARVAEML--HPHTDDIVVDAEGVEFIDSSGIAVLGQIAHNHP 81 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKN 95 G++ L + + + ++++ Sbjct: 82 GRVTLLNAPPTMLFILEVTQLIDVIRLES 110 >gi|307327930|ref|ZP_07607112.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] gi|306886448|gb|EFN17452.1| anti-sigma-factor antagonist [Streptomyces violaceusniger Tu 4113] Length = 107 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ ++DL+ + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTALHTAVDA--GGGDLVLDLTELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+GV +++L Sbjct: 62 RRAGRVGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|290957339|ref|YP_003488521.1| anti-anti-sigma-factor [Streptomyces scabiei 87.22] gi|260646865|emb|CBG69962.1| putative anti-anti-sigma-factor [Streptomyces scabiei 87.22] Length = 107 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTVLHSAVDD--GAGDLVLDLSELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+ V +++L Sbjct: 62 RRAGRCGRRLVLRAVPPQMQRLLVATRLHR 91 >gi|269796785|ref|YP_003316240.1| anti-anti-sigma regulatory factor [Sanguibacter keddieii DSM 10542] gi|269098970|gb|ACZ23406.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Sanguibacter keddieii DSM 10542] Length = 124 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 5/87 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62 T AG+ E + + + ++ ++D+ +T +D+ GA ++ Sbjct: 10 TTTLVIAGDLDLAERDQFPEIAARVVG--LRRQLLVIDMCRVTFMDSTGAAFLISLADSG 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 K G L+G + + Sbjct: 68 RKRGGATVLRGCDDRDLFVLEVCGALE 94 >gi|268590737|ref|ZP_06124958.1| anti-sigma B factor antagonist [Providencia rettgeri DSM 1131] gi|291313509|gb|EFE53962.1| anti-sigma B factor antagonist [Providencia rettgeri DSM 1131] Length = 96 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 31/81 (38%), Gaps = 5/81 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 T F G + + ++ + +D+S + +D+ G +++ ++ Sbjct: 12 TTLYFNGTLDRDSLMSFWNKKESSLEHTE-----SIDVSGLKHVDSTGLAMLVRLKGEFQ 66 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 K + ++ + L +LI Sbjct: 67 AKNRSLNITGVSDNLKTLIEL 87 >gi|330501883|ref|YP_004378752.1| anti-sigma-factor antagonist [Pseudomonas mendocina NK-01] gi|328916169|gb|AEB57000.1| anti-sigma-factor antagonist [Pseudomonas mendocina NK-01] Length = 102 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E + AG ++ + I S + +D +A+ + ++G L++ Sbjct: 6 ITERSTGQLQLAGVLDYSTGPQLREQGARLIASSSAAR-LSLDCNAVEKSSSVGLALLLA 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 FM + +S + + + Sbjct: 65 FMRDARKAGRELTISGLPDDMREIAQ 90 >gi|262197621|ref|YP_003268830.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365] gi|262080968|gb|ACY16937.1| anti-sigma-factor antagonist [Haliangium ochraceum DSM 14365] Length = 114 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 6/82 (7%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E GI + G+ + + V + + I+DL ++ + + G +++ Sbjct: 7 TEQGIDIITLHGHLDTRSSPAVQAAV---LPRVTAKGKMILDLREVSYMSSAGLRVLLSL 63 Query: 62 ME---KYHGKIKLQGVSTHIEQ 80 G + L GVS I Sbjct: 64 YRHTSNQQGALVLVGVSEEIRD 85 >gi|302560280|ref|ZP_07312622.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302477898|gb|EFL40991.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 125 Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V AG + + + + K ++D S + D+ G +++ Sbjct: 21 EGPSAVVTPAGELDHHTADLLREPLEDCLAKGY--KRLVIDCSRLEFCDSTGLNVLLGAR 78 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 E G + L G+ + ++F + Sbjct: 79 LKAEAAGGGVHLAGMQPVVARVFEI 103 >gi|325273314|ref|ZP_08139586.1| toluene-tolerance protein TtgE [Pseudomonas sp. TJI-51] gi|324101547|gb|EGB99121.1| toluene-tolerance protein TtgE [Pseudomonas sp. TJI-51] Length = 100 Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 1/79 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G ++ A+ + + ++D S + ++G L++ FM Sbjct: 13 VLSLSGVLDYRSGPQLRKQ-GKALITASRDAQLVLDCSGVLRSTSVGLSLLLSFMRDAQA 71 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K V + + + Sbjct: 72 AGKACRVRGMPDDMREIAE 90 >gi|229816422|ref|ZP_04446723.1| hypothetical protein COLINT_03475 [Collinsella intestinalis DSM 13280] gi|229807964|gb|EEP43765.1| hypothetical protein COLINT_03475 [Collinsella intestinalis DSM 13280] Length = 106 Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 7/83 (8%), Positives = 30/83 (36%), Gaps = 2/83 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G ++ + + +A+ + ++ +D S + ID+ G +++ + Sbjct: 15 RYLIVVEGEIDISNADKLRNAIDLALEQ--PTERVELDFSQVPYIDSTGIGVLVGAARRA 72 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 + + ++ + + Sbjct: 73 SERERALSITGAQPNVLRVAQLL 95 >gi|300789248|ref|YP_003769539.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299798762|gb|ADJ49137.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 123 Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G V AG + D V A+ ++ D ++DLS ++ + +IG +++ Sbjct: 23 SGGTVVLAVAGEIDLLSAPVLGDGVTTALAEAP--DLLVIDLSEVSFLASIGITVLLEAR 80 Query: 63 EKYHGKIKLQGVSTH 77 + +++ V+ Sbjct: 81 REAGAGTRVRVVAPE 95 >gi|239929823|ref|ZP_04686776.1| anti-sigma factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|291438155|ref|ZP_06577545.1| anti-sigma-B factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|302553081|ref|ZP_07305423.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes DSM 40736] gi|302559335|ref|ZP_07311677.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Streptomyces griseoflavus Tu4000] gi|291341050|gb|EFE68006.1| anti-sigma-B factor antagonist [Streptomyces ghanaensis ATCC 14672] gi|302470699|gb|EFL33792.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes DSM 40736] gi|302476953|gb|EFL40046.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Streptomyces griseoflavus Tu4000] Length = 113 Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 T+ R G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 11 GDRTIVRVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|317407772|gb|EFV87699.1| hypothetical protein HMPREF0005_03220 [Achromobacter xylosoxidans C54] Length = 119 Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + V G S +E D++ + + I+DLS + I + G +++ Sbjct: 9 DDALVVCPKGQLNSANAAEFEADILARLA--TGAARLILDLSGLDYISSAGLRVVLVAAQ 66 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQK 97 + + G + L G+S + ++F + F I+ K Sbjct: 67 TVREQGGVLILCGLSGAVHEVFEVSGFLDILPIREDK 103 >gi|297201347|ref|ZP_06918744.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] gi|197712790|gb|EDY56824.1| anti-sigma F factor antagonist [Streptomyces sviceus ATCC 29083] Length = 113 Score = 37.3 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 T+ R G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 11 GDRTIVRVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|46200828|ref|ZP_00056363.2| COG1366: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum magnetotacticum MS-1] Length = 100 Score = 36.9 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ R G +++ + SI++ I DL + +D++G ++ Sbjct: 8 QDDTLTVRLDGTMDYTVTAQMNGLITDL--NSIKASRVIFDLVKVGRVDSVGLGMLHLAK 65 Query: 63 EK---YHGKIKLQGVSTHIEQLFSL 84 ++ ++ L+G + ++ +LF L Sbjct: 66 DEIIGKGRRLTLRGAAGNVRRLFEL 90 >gi|312897532|ref|ZP_07756952.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310621384|gb|EFQ04924.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 364 Score = 36.9 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 5/117 (4%) Query: 161 YYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMI 220 ++G V S G + A ++Q+GA +++ + +L L + + Sbjct: 11 EFIGPFLFGVCAFTSVFVGTGTLYRIANLINQYGASMWAAFRILVLAL----PSIIVITF 66 Query: 221 AGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFS 277 + G M EI +R+ G + L P + T F Sbjct: 67 PMSVLLGSLMAFGRMSAASEIIVMRSGGQN-FPRLAMPIFITALCISLGTTAFNEFV 122 >gi|144901268|emb|CAM78132.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] Length = 102 Score = 36.9 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ + G ++ + ++ + + S + DL+ ++ ID++G L+ Sbjct: 10 NDGSTALVTLEGQLDF-SANDTFEKLLDTLKSNPPSK-LVFDLTGLSTIDSVGLGLLYIA 67 Query: 62 MEKYHG-KIKLQGVSTHIEQLFSLISFT 88 E G + L+ ++ +L L Sbjct: 68 SEDLSGVPVVLRNPQGYVARLLDLTDAA 95 >gi|83594239|ref|YP_427991.1| anti-sigma-factor antagonist domain-containing protein [Rhodospirillum rubrum ATCC 11170] gi|83577153|gb|ABC23704.1| Anti-Sigma-factor antagonist (STAS) domain protein [Rhodospirillum rubrum ATCC 11170] Length = 111 Score = 36.9 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 3/81 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + +G + + ++ A++ +VDL + ID+ G ++ + K Sbjct: 13 AILEVSGAVDLRSSPRLREALLRALDS---GRGLVVDLHKVGSIDSSGVSSLLEALIKAR 69 Query: 67 GKIKLQGVSTHIEQLFSLISF 87 ++ +I+ Sbjct: 70 DTGLDFTLTRVSADAMRVITL 90 >gi|294629740|ref|ZP_06708300.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292833073|gb|EFF91422.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 125 Score = 36.9 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E V AG + + + + K +VD S + D+ G +++ Sbjct: 21 EGSSAVVTPAGELDHHTADLLREPLEECLEK--GRSRLVVDCSRLEFCDSTGLNVLLGAR 78 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 E G + L G+ + ++F + Sbjct: 79 LKAEAAGGGVHLAGMLPVVARVFEI 103 >gi|92113597|ref|YP_573525.1| anti-sigma-factor antagonist domain-containing protein [Chromohalobacter salexigens DSM 3043] gi|91796687|gb|ABE58826.1| anti-sigma-factor antagonist (STAS) domain protein [Chromohalobacter salexigens DSM 3043] Length = 171 Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 10/114 (8%), Positives = 34/114 (29%), Gaps = 5/114 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM-- 62 G+ V + +G+ + + D + S + ++DL T +D+ + Sbjct: 13 GVFVLKLSGDVRL-TLCATLDQQAQRVADSPGLAAVMIDLREATNVDSTALGFLAKVAMA 71 Query: 63 --EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHI 114 + + + ++ ++ F+ + + + Sbjct: 72 VEGRLEQPPTIVAEHPDVRRMLDVMGFSRYFTLLDAPLTEPASLRELPQVRADE 125 >gi|194336122|ref|YP_002017916.1| anti-sigma-factor antagonist [Pelodictyon phaeoclathratiforme BU-1] gi|194308599|gb|ACF43299.1| anti-sigma-factor antagonist [Pelodictyon phaeoclathratiforme BU-1] Length = 107 Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 26/84 (30%), Gaps = 4/84 (4%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G + + + S ++DL + +D+ G ++ K Sbjct: 13 VLSLRGMLNASSAPALKT----CVAGFPDEQSIVIDLENVDFLDSSGLGALVGIARKKKA 68 Query: 68 KIKLQGVSTHIEQLFSLISFTHRK 91 + ++ E++ + T Sbjct: 69 SKAIMKLARMNERVKKVFEITQAH 92 >gi|303248696|ref|ZP_07334950.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] gi|302489952|gb|EFL49878.1| anti-sigma-factor antagonist [Desulfovibrio fructosovorans JJ] Length = 113 Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + R+ G ++ + ++ + + ++DLS +T +D+ G ++ Sbjct: 10 GNALMLRYVGEITLEITGDLKRRLDAELDGNSVG-TVVIDLSDVTFMDSSGIGFLVSVNT 68 Query: 64 KYHGKIK 70 + + Sbjct: 69 RMRSAGR 75 >gi|240170863|ref|ZP_04749522.1| regulator of sigma subunit, anti-anti-sigma factor RsbU [Mycobacterium kansasii ATCC 12478] Length = 653 Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 ++E G + R G+ + + + + A+ S +DLSA+T + + G ++ Sbjct: 553 VAEPGRIIVR--GDVDANAATTLDSQI--AVESRSGLASLTIDLSAVTHLGSAGVAALVA 608 Query: 61 FMEKYHGKIKLQGV 74 ++ + + Sbjct: 609 ARDRARKQGADCAL 622 >gi|86606745|ref|YP_475508.1| anti-anti-sigma factor [Synechococcus sp. JA-3-3Ab] gi|86555287|gb|ABD00245.1| anti-anti-sigma factor [Synechococcus sp. JA-3-3Ab] Length = 124 Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + G + + SE+ + ++ + ++D+SA+T +D+ G +++ + K Sbjct: 19 AIVPLEGRFDAKAASEVRQLLQQVLD--FGYHNLLIDMSAVTFMDSSGLGVLISALRKCR 76 Query: 67 GKI 69 Sbjct: 77 AAG 79 >gi|331698015|ref|YP_004334254.1| sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] gi|326952704|gb|AEA26401.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudonocardia dioxanivorans CB1190] Length = 123 Score = 36.9 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G + +V+ A+ ++ + ++DLSA T + ++G ++ Sbjct: 24 GGVVLVVTGPLDLSLAPRLRREVLRAVR--LRPATLVIDLSASTFLASVGMAELVRAHRT 81 Query: 65 YHGKIKLQGVSTHIEQLFSL 84 + ++ V+ L L Sbjct: 82 AGAGVTVRIVAAGPLLLRPL 101 >gi|229149311|ref|ZP_04277548.1| Anti-sigma factor antagonist [Bacillus cereus m1550] gi|228634125|gb|EEK90717.1| Anti-sigma factor antagonist [Bacillus cereus m1550] Length = 112 Score = 36.9 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ S + +VD + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVQIVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|196233315|ref|ZP_03132160.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] gi|196222620|gb|EDY17145.1| anti-sigma-factor antagonist [Chthoniobacter flavus Ellin428] Length = 108 Score = 36.9 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY-- 65 + G ++ + + +++ + +VD S +T ID+ G ++ +++ Sbjct: 11 ILALEGEIDLHRSPQVKETLEPLVSQKV--PRILVDFSQVTYIDSSGLATMIETLQRIQS 68 Query: 66 -HGKIKLQGVSTHIEQLFSLISFTH 89 GK + G+ + +F + Sbjct: 69 YGGKFAMFGLRDSVRNIFEIARLDQ 93 >gi|324325027|gb|ADY20287.1| anti-sigma B factor antagonist (RsbV) [Bacillus thuringiensis serovar finitimus YBT-020] Length = 111 Score = 36.9 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 8 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--MVVDFTEVEYMDSTGLGVFIA 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97 >gi|148242429|ref|YP_001227586.1| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Synechococcus sp. RCC307] gi|147850739|emb|CAK28233.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Synechococcus sp. RCC307] Length = 138 Score = 36.9 bits (84), Expect = 4.9, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSD--SAIVDLSAITEIDTIGAELIMY 60 ++ +F F G + I + S ++DLS I ID+ G ++ Sbjct: 34 QDQCLLFHFTGQLDAYS----ERQFRDFIGDNAPSGLKPLVIDLSKIDFIDSSGLGALVQ 89 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 ++++ + K + + ++ + + N +P + Sbjct: 90 LAKQWN-EGKRRFLIVGNSRVVQTVKLVRLEAFLNLQPDLPTALGNIAA 137 >gi|313202373|ref|YP_004041031.1| anti-sigma-factor antagonist [Methylovorus sp. MP688] gi|312441689|gb|ADQ85795.1| anti-sigma-factor antagonist [Methylovorus sp. MP688] Length = 96 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G E +E + + Q + +DL+ +TEIDT G +L++ + Sbjct: 3 HVVIEGEMTIFEAAEYHAAL---LPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQ 59 Query: 68 KIKLQGVSTHIEQLFSLISFTH 89 ++ H E + ++ T Sbjct: 60 TGSTLSITGHSETVQQVLDATD 81 >gi|312876649|ref|ZP_07736630.1| anti-sigma-factor antagonist [Caldicellulosiruptor lactoaceticus 6A] gi|311796602|gb|EFR12950.1| anti-sigma-factor antagonist [Caldicellulosiruptor lactoaceticus 6A] Length = 102 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SENG+ V G + D + I+ S S IVD++ ++ ID+ G + + Sbjct: 9 ISENGV-VIELKGELDIFSSPTLKDKLYSLIDTS--SSDVIVDMNDVSYIDSTGLGVFVG 65 Query: 61 FMEKYHGKI 69 ++K K Sbjct: 66 ALKKSKQKG 74 >gi|152981529|ref|YP_001352333.1| teichoic acid biosynthesis protein [Janthinobacterium sp. Marseille] gi|151281606|gb|ABR90016.1| teichoic acid biosynthesis protein [Janthinobacterium sp. Marseille] Length = 396 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 6/93 (6%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME--- 63 G W+ + + A + +D S +T ID+ L+M Sbjct: 301 CTITAGGAWEESNLQPMRKAFSDA---TAMPGDIRIDFSGVTHIDSACIALLMLLYGHQT 357 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 K L GV + + +L + +I+ Sbjct: 358 KVQRDFFLYGVHADVLRTLNLFCADYLVRIEQP 390 >gi|182437100|ref|YP_001824819.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] gi|178465616|dbj|BAG20136.1| putative anti-sigma factor antagonist [Streptomyces griseus subsp. griseus NBRC 13350] Length = 117 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95 >gi|328883366|emb|CCA56605.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV [Streptomyces venezuelae ATCC 10712] Length = 117 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + TV G ++ + +V +N S +VD+ + +D+ G +++ Sbjct: 13 AGGDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGG 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 +++ + + E++ + Sbjct: 71 LKRVRAHEGSLRLVCNQERILKIFR 95 >gi|300309956|ref|YP_003774048.1| anti-sigma-factor antagonist (STAS) domain-containing protein [Herbaspirillum seropedicae SmR1] gi|300072741|gb|ADJ62140.1| anti-sigma-factor antagonist (STAS) domain protein [Herbaspirillum seropedicae SmR1] Length = 102 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 34/90 (37%), Gaps = 2/90 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + + +G + +E +++ + ++ +DL+ + EIDT G +L++ Sbjct: 8 QEDKLLLQVSGGLTIFQAAERKPELLHVL--TLAQPQVQLDLAGVDEIDTAGIQLLLLLR 65 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKK 92 + + + + L + Sbjct: 66 RELRAQGRSLDIVGASPALLVAFDLLQLHE 95 >gi|294629920|ref|ZP_06708480.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292833253|gb|EFF91602.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 122 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 5/81 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + G +V G + V + + ++DLS + D+ G +++ Sbjct: 10 QGGWSVLHVVGELDLVTSPVLRQRVHDVVAQ--GRHDLVLDLSEVFFCDSSGVGVLIAAR 67 Query: 60 YFMEKYHGKIKLQGVSTHIEQ 80 + G+++L + E+ Sbjct: 68 RLIRSCQGRLRLLLPAGGAEE 88 >gi|152976484|ref|YP_001376001.1| anti-sigma-factor antagonist [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025236|gb|ABS23006.1| anti-sigma-factor antagonist [Bacillus cytotoxicus NVH 391-98] Length = 116 Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 + R AG E+ V I +++L ++ +D+ G +I+ Sbjct: 12 DVLCVRLAGELDHHTAEELRARVTDKIETH-NVHHIVLNLEELSFMDSSGLGVILGRYKH 70 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + +++ + Sbjct: 71 VKSLGGEMVVCAISPSVKRLFEMSGLFKIVRLEESEAH 108 >gi|222094728|ref|YP_002528788.1| anti-sigma b factor antagonist (rsbv) [Bacillus cereus Q1] gi|221238786|gb|ACM11496.1| anti-sigma B factor antagonist (RsbV) [Bacillus cereus Q1] Length = 111 Score = 36.9 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ + +VD + + +D+ G + + Sbjct: 8 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIAGEKEVY--IVVDFTEVEYMDSTGLGVFIA 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K +GK++ GVS +++LF + T Sbjct: 66 LLKAVKKNNGKLEFIGVSKRLKRLFDITGLTE 97 >gi|29829411|ref|NP_824045.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29606518|dbj|BAC70580.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 107 Score = 36.9 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + I+DLS + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTVLHSAVDDGV--GDLILDLSELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+ V +++L Sbjct: 62 RRAGRCGRRLVLRDVPPQMQRLLVATRLHR 91 >gi|88808426|ref|ZP_01123936.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp. WH 7805] gi|88787414|gb|EAR18571.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus sp. WH 7805] Length = 129 Score = 36.9 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G VF F G + + V + + + S ++DLS I +D+ G ++ + Sbjct: 27 GGCLVFHFTGQLDAFSEKQFLSYVADVLKAN--ASSTVLDLSKIDFLDSSGLGALVQLAK 84 Query: 64 KYHGKIK 70 + + + Sbjct: 85 QCNDSKR 91 >gi|288555623|ref|YP_003427558.1| anti-sigmaB factor antagonist [Bacillus pseudofirmus OF4] gi|288546783|gb|ADC50666.1| anti-sigmaB factor antagonist [Bacillus pseudofirmus OF4] Length = 103 Score = 36.9 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + G+ I ++++ A+ +Q + I++ + ID+ G L++ ++ + + Sbjct: 15 VKLIGDLDIDSTELIEEELLPAL---MQHQTIIINFEEVPFIDSSGIGLLLSTIQTLNEQ 71 Query: 69 IKLQGVSTHIEQLFSLISFTHRKKI 93 +S ++ + +I Sbjct: 72 QIALTISKVRTEVMDIFEMLQIPEI 96 >gi|144898325|emb|CAM75189.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum gryphiswaldense MSR-1] Length = 108 Score = 36.9 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 +G V +G + ++ + + +VD++++ ID+ G ++ Sbjct: 9 DGAVVVALSGEVDLQHSPSVRKHLMDLMFER---RPVVVDMASVDYIDSSGIASLVEAYQ 65 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87 K + L +S ++ L Sbjct: 66 MARKNGTRFILAAISAPAMRVLQLARL 92 >gi|302555832|ref|ZP_07308174.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes DSM 40736] gi|302473450|gb|EFL36543.1| anti-sigma F factor antagonist [Streptomyces viridochromogenes DSM 40736] Length = 127 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 30/95 (31%), Gaps = 2/95 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V G + + + + DLS +T +D+ G + + + Sbjct: 27 SGVRVVTLRGE--IDHDVQDVLSQALLAENTTVPLRMVADLSGVTFMDSSGINVFVAAYQ 84 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ E + ++ + P Sbjct: 85 QASDTGGWVRIAGAQESVLRVLQLVGVDTLIPCHP 119 >gi|295836475|ref|ZP_06823408.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197699030|gb|EDY45963.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 100 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHSELVVGGRLDVRSAADARSILHTAVDD--GAGDLVLDLSELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ L+ V +++L I+ P Sbjct: 62 RRAGRCGRRLVLRAVPAQMQRLLVATRLHRILAIEAVAP 100 >gi|323138390|ref|ZP_08073460.1| anti-sigma-factor antagonist [Methylocystis sp. ATCC 49242] gi|322396337|gb|EFX98868.1| anti-sigma-factor antagonist [Methylocystis sp. ATCC 49242] Length = 114 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 3/98 (3%) Query: 3 ENGITVFRFAGN-WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + G TV + + SE+ + ++ + + + I+DL + ID+ G ++ Sbjct: 8 QGGRTVLSVQEDRLDAHNSSELKERILKILEAGVH--NLIIDLGQVQFIDSSGLGALLSG 65 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + + + ++ S+ T ++ + P Sbjct: 66 YKNASLRSSAFALVGLQPRVRSMFELTRLHRVFDIYPD 103 >gi|310826429|ref|YP_003958786.1| possible anti-sigma B factor antagonist [Eubacterium limosum KIST612] gi|308738163|gb|ADO35823.1| possible anti-sigma B factor antagonist [Eubacterium limosum KIST612] Length = 103 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ENG R G ++ + + I + + +DL+ ++ ID+ G +++ Sbjct: 8 ENGREGVRVTGEVDIYTATQFKEPIEKLIEANTKD--IFLDLTDLSYIDSTGIGILIELR 65 Query: 63 E 63 + Sbjct: 66 K 66 >gi|302868154|ref|YP_003836791.1| sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|315505449|ref|YP_004084336.1| sulfate transporter/antisigma-factor antagonist stas [Micromonospora sp. L5] gi|302571013|gb|ADL47215.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora aurantiaca ATCC 27029] gi|315412068|gb|ADU10185.1| Sulfate transporter/antisigma-factor antagonist STAS [Micromonospora sp. L5] Length = 99 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 S +G+ V G S AD + A+ + +VDL+ + +D+ G + Sbjct: 12 SPDGVRVLAAVGEIDMSNASAFADALAEAVR--PDGEPLVVDLTKVEYLDSAGLAAL 66 >gi|256391115|ref|YP_003112679.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] gi|256357341|gb|ACU70838.1| anti-sigma-factor antagonist [Catenulispora acidiphila DSM 44928] Length = 127 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 9/88 (10%), Positives = 26/88 (29%), Gaps = 3/88 (3%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 AG+ + + + +VD S + +D++G ++ K Sbjct: 31 AVTVTVAGDVDLAAADTLWSVLDEYVRS---GAQVVVDCSRVAFLDSMGLRTLIRAQHKA 87 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKI 93 ++ E + ++ + Sbjct: 88 KASGARLTLAAPSEAVLRVLQLAGVADL 115 >gi|3287907|sp|O32723|SP2AA_BACSH RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein AA gi|2529269|gb|AAB81189.1| SpoIIAA [Lysinibacillus sphaericus] Length = 117 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFM 62 V R G + +I + AI + I +L ++ +D+ G L+ M + Sbjct: 12 TVVIRLFGELDHHAVEQIRAKISAAIF-QGTVTTIIWNLEGLSFMDSSGVGLVLGRMREL 70 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 E G+ L S + ++F Sbjct: 71 EAVAGRTILLNPSPTMRKVFQF 92 >gi|330899431|gb|EGH30850.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. japonica str. M301072PT] Length = 115 Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 5/87 (5%) Query: 1 MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S++G + G + A + QS + +VDL +D+ +++ Sbjct: 7 LSDDGRTLILEIEGRFDFNS----HQAFRAAYEEHPQSLNYVVDLRGTHYLDSSALGMLL 62 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLIS 86 + G L + + +++ Sbjct: 63 LLRDHAGGDKALVRLVNCTPDVLKILA 89 >gi|300870194|ref|YP_003785065.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000] gi|300687893|gb|ADK30564.1| anti sigma factor antagonist [Brachyspira pilosicoli 95/1000] Length = 111 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 EN +V + G+ S++ D + I+ + I+D+ + ID+ G + ++ + Sbjct: 9 ENNTSVIKLVGDIDVYTSSDLKDAINSQID--FGAKRIIIDMEDVYYIDSSGIGVFVFAI 66 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 ++ +GKI + ++ ++ ++F L Sbjct: 67 GSFKRVNGKIGIVKITENVRKVFEL 91 >gi|302518643|ref|ZP_07270985.1| anti-sigma factor [Streptomyces sp. SPB78] gi|302427538|gb|EFK99353.1| anti-sigma factor [Streptomyces sp. SPB78] Length = 125 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R +G + + +++ A + I+DLS + D+ ++ + Sbjct: 34 LVRASGELDLDTVGALREELEEAAARYP---VVILDLSLVDFGDSSFLNFLIRV--RATT 88 Query: 68 KIKLQGVSTHIEQLFSL 84 +++L + + QLF+L Sbjct: 89 RLRLVAPTEPLRQLFAL 105 >gi|240172555|ref|ZP_04751214.1| anti-anti-sigma regulatory factor [Mycobacterium kansasii ATCC 12478] Length = 122 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V G + + + + + + I+DLS + + ++G +++ E Sbjct: 15 DGVAVLSIGGEIDLVTAPALEEAIGGVVADNPSA--LIIDLSGVEFLGSVGLKILAATYE 72 Query: 64 KYHGKIKLQGVSTHIEQLFSL 84 K + V+ + Sbjct: 73 KLGSAAQFGVVARGPATRRPI 93 >gi|291298031|ref|YP_003509309.1| anti-sigma-factor antagonist [Stackebrandtia nassauensis DSM 44728] gi|290567251|gb|ADD40216.1| anti-sigma-factor antagonist [Stackebrandtia nassauensis DSM 44728] Length = 109 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ TV G +E+ + + + K++ +D++ + D+ G +I+ Sbjct: 9 TDGEYTVVAVGGEIDMFTATELREALHAELAKNVS--RLAIDVNGVEFCDSTGLGVIIGV 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFT 88 + + + +Q+ + T Sbjct: 67 LRRLRESGGKLVIVCARQQMLKIFQLT 93 >gi|124268280|ref|YP_001022284.1| putative signal peptide protein [Methylibium petroleiphilum PM1] gi|124261055|gb|ABM96049.1| putative signal peptide protein [Methylibium petroleiphilum PM1] Length = 93 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Query: 15 WKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEID-TIGAELIM--YFMEKYHGKIKL 71 E + + +++ + + ++D S + D T A L+ + + + +L Sbjct: 8 LTLNEARDTLRLLKVSLEREAE-PLLVIDGSQLQRFDSTALAVLLECRRLAQAWGKRFEL 66 Query: 72 QGVSTHIEQLFSLISFTH 89 V + +L L Sbjct: 67 TAVPEKLSELSRLYGIDD 84 >gi|289665356|ref|ZP_06486937.1| anti-sigma factor antagonist [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 139 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 37/104 (35%), Gaps = 5/104 (4%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 G + ++ + ++ I + ++DLSA+ I + G I + Sbjct: 18 VILTGRLSTHTHQDLDAALSPLLDTRIT--TLVLDLSALEYISSAGIRCIFKARKALATR 75 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 HGK+ + I ++F ++ + + + + + Sbjct: 76 HGKVLVSNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLEAMQR 119 >gi|302521959|ref|ZP_07274301.1| anti-sigma factor [Streptomyces sp. SPB78] gi|318059407|ref|ZP_07978130.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actG] gi|318080988|ref|ZP_07988320.1| anti-sigma factor antagonist [Streptomyces sp. SA3_actF] gi|302430854|gb|EFL02670.1| anti-sigma factor [Streptomyces sp. SPB78] Length = 100 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 + G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHSELVVGGRLDVRSAADARSILHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKP 98 + ++ L+ V +++L I+ P Sbjct: 62 RRAGRCGRRLVLRAVPAQMQRLLVATRLHRILAIEAVAP 100 >gi|284992224|ref|YP_003410778.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] gi|284065469|gb|ADB76407.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] Length = 121 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 2/81 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + +G S + + V A + + VDL +T +D+ G ++ + Sbjct: 21 GVLLTVSGEVDSSTAPRLREVVDAAFADRVPA--LTVDLDGVTFLDSAGLCVLAGAHRRA 78 Query: 66 HGKIKLQGVSTHIEQLFSLIS 86 L V + + Sbjct: 79 AEGGVLLRVVASSRAVIRPLQ 99 >gi|218885341|ref|YP_002434662.1| chemotaxis protein CheA [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756295|gb|ACL07194.1| putative CheA signal transduction histidine kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 669 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 29/87 (33%), Gaps = 4/87 (4%) Query: 2 SENGIT-VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 S+ G V +G +++ + ++ + +DLS +T D +L+ Sbjct: 563 SQGGAKGVLVLSGEVTIERGADLREALLDVLGSFAT---VRIDLSGVTAADLTLVQLLQS 619 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISF 87 + + + + + + Sbjct: 620 AAVTARARGVDLAATGLVSEAVAEAAR 646 >gi|297582859|ref|YP_003698639.1| anti-sigma-factor antagonist [Bacillus selenitireducens MLS10] gi|297141316|gb|ADH98073.1| anti-sigma-factor antagonist [Bacillus selenitireducens MLS10] Length = 109 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 5/97 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFMEK 64 V +G S++ + + + ++ VDLS + ID+ G + + EK Sbjct: 15 VAYVSGEVDVYTASKLKETLNPLAEQ--ENKDLYVDLSNVEYIDSTGLGIFIGTLKLTEK 72 Query: 65 YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 +KL+G++ + +LF + +I K + + Sbjct: 73 SGSNLKLRGLNDRVLRLFEITGLNEVIEIDADKREEA 109 >gi|30261114|ref|NP_843491.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Ames] gi|47526269|ref|YP_017618.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. 'Ames Ancestor'] gi|49183948|ref|YP_027200.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Sterne] gi|254682829|ref|ZP_05146690.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. CNEVA-9066] gi|254725615|ref|ZP_05187397.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A1055] gi|254734241|ref|ZP_05191954.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Western North America USA6153] gi|254740110|ref|ZP_05197802.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Kruger B] gi|254753451|ref|ZP_05205487.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Vollum] gi|254758548|ref|ZP_05210575.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Australia 94] gi|8670943|emb|CAB95032.1| rsbV [Bacillus anthracis] gi|30254728|gb|AAP24977.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Ames] gi|47501417|gb|AAT30093.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. 'Ames Ancestor'] gi|49177875|gb|AAT53251.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. Sterne] Length = 111 Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ S + +VD + + +D+ G + + Sbjct: 8 LQNDVGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVRIVVDFNKVDYMDSTGLGVFIA 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97 >gi|296126997|ref|YP_003634249.1| anti-sigma-factor antagonist [Brachyspira murdochii DSM 12563] gi|296018813|gb|ADG72050.1| anti-sigma-factor antagonist [Brachyspira murdochii DSM 12563] Length = 111 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 EN V + G+ S++ D + I + + I+D+ + ID+ G + + + Sbjct: 9 ENNTAVLKLDGDIDVYTSSDLKDVIFSQIE--LGAKKIIIDMEDVYYIDSSGIGVFISAL 66 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 +K +GKI V+ ++++F L Sbjct: 67 GAFKKVNGKICFVKVTEPVKKVFEL 91 >gi|221195870|ref|ZP_03568923.1| anti-anti-sigma factor family protein [Atopobium rimae ATCC 49626] gi|221184344|gb|EEE16738.1| anti-anti-sigma factor family protein [Atopobium rimae ATCC 49626] Length = 243 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 38/108 (35%), Gaps = 2/108 (1%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 I V + + + + +V + + I++++ ++ +D+ G IM + + Sbjct: 7 IVVLSLSSDLDVTTVPAVRREVESLLKQGCL--RIILNMADVSYVDSAGMSFIMCALRRI 64 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYH 113 L ++ + +F +S + + + + H Sbjct: 65 CAMGGLMSLTNVSQPVFRGLSRMRLVDFMPVARVGAREHIAPLDPRVH 112 >gi|239943097|ref|ZP_04695034.1| putative anti-sigma factor antagonist [Streptomyces roseosporus NRRL 15998] gi|282863643|ref|ZP_06272701.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|291446574|ref|ZP_06585964.1| BldG [Streptomyces roseosporus NRRL 15998] gi|297193028|ref|ZP_06910426.1| anti-sigma-B factor antagonist [Streptomyces pristinaespiralis ATCC 25486] gi|326777715|ref|ZP_08236980.1| anti-sigma-factor antagonist [Streptomyces cf. griseus XylebKG-1] gi|197719842|gb|EDY63750.1| anti-sigma-B factor antagonist [Streptomyces pristinaespiralis ATCC 25486] gi|282561344|gb|EFB66888.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|291349521|gb|EFE76425.1| BldG [Streptomyces roseosporus NRRL 15998] gi|320009998|gb|ADW04848.1| anti-sigma-factor antagonist [Streptomyces flavogriseus ATCC 33331] gi|326658048|gb|EGE42894.1| anti-sigma-factor antagonist [Streptomyces cf. griseus XylebKG-1] Length = 117 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95 >gi|167520576|ref|XP_001744627.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776958|gb|EDQ90576.1| predicted protein [Monosiga brevicollis MX1] Length = 913 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%) Query: 311 FTGLIKAPFMACAIGIVAMKEGFAVGVHSNSLGKKVTTCVVQSISIVIIIDSLFAIF 367 F ++ I A + ++ +T+ VV + +I+ D LF+ Sbjct: 853 FVLFYRSLTFTAIIMGCAEWRARRPSLQPRNVASAITSAVVSAGVAIIVADGLFSQI 909 >gi|162453095|ref|YP_001615462.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] gi|161163677|emb|CAN94982.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] Length = 390 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 4/89 (4%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G G + SE+ + ++ AI ++ ++D++ +D GA + Sbjct: 277 GTLAVPLIGRLDAERGSELGERLLPAIVAQ-RASHVVLDVTGAEALDPDGAAALERLAHA 335 Query: 65 ---YHGKIKLQGVSTHIEQLFSLISFTHR 90 + L GV + + + Sbjct: 336 IQLLGSRPILTGVRPEVARALVDVDLGDE 364 >gi|86160180|ref|YP_466965.1| anti-sigma-factor antagonist domain-containing protein [Anaeromyxobacter dehalogenans 2CP-C] gi|197124207|ref|YP_002136158.1| sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter sp. K] gi|220918987|ref|YP_002494291.1| Sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter dehalogenans 2CP-1] gi|85776691|gb|ABC83528.1| anti-sigma-factor antagonist (STAS) domain protein [Anaeromyxobacter dehalogenans 2CP-C] gi|196174056|gb|ACG75029.1| Sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter sp. K] gi|219956841|gb|ACL67225.1| Sulfate transporter/antisigma-factor antagonist STAS [Anaeromyxobacter dehalogenans 2CP-1] Length = 100 Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI 58 +++ +TV R G E+S IA A + +VDL +T + GA L+ Sbjct: 6 NQDEVTVIRCVGELTRDELSAIAGLAQRA---RHEGRMVVVDLKRVTHLHYAGAALL 59 >gi|289678981|ref|ZP_06499871.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae FF5] gi|330940711|gb|EGH43719.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. pisi str. 1704B] gi|330976002|gb|EGH76068.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 115 Score = 36.9 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 5/87 (5%) Query: 1 MSENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM 59 +S++G + G + A QS + +VDL +D+ +++ Sbjct: 7 LSDDGRTLILEIEGRFDFNS----HQAFRAAYEDHPQSLNYVVDLRGTHYLDSSALGMLL 62 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLIS 86 + G L + + +++ Sbjct: 63 LLRDHAGGDKALVRLVNCTPDVLKILA 89 >gi|288941811|ref|YP_003444051.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180] gi|288897183|gb|ADC63019.1| anti-sigma-factor antagonist [Allochromatium vinosum DSM 180] Length = 113 Score = 36.9 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 38/100 (38%), Gaps = 5/100 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++GI V + +G + ++ V + + + ++D + I + G ++ Sbjct: 8 QDGIHVLKVSGQLDALSGADYEQGVNRLVAE--GARRLVLDFGPLVYISSAGLRALLNTS 65 Query: 63 E---KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + G + + + ++F + K+ + P+ Sbjct: 66 KPLMAQGGALVYVNLQPSVREVFEMTGLLSLFKVCDSLPE 105 >gi|294814899|ref|ZP_06773542.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294327498|gb|EFG09141.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 986 Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 18/155 (11%) Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 + TAV + + + +M + ++ MG+ + I AL+ L Sbjct: 80 MATAVGVNIWLAHRLRPPLSAMSLEQQSLDRYRMGIAPYKKWALLAITALV----GLIAG 135 Query: 274 ANFSA---IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI-GIVAM 329 A+ + I + + L + + A + ++A Sbjct: 136 ASATGQWRTWLMWIHGVPFGEKDPQFKLDVSFYAFDLP--WYRFLLGFGFAAVVLSLIAA 193 Query: 330 ------KEGFA-VGVHSNSLGKKVTT-CVVQSISI 356 G + + G V+ I + Sbjct: 194 ALTHYLYGGLRITSPGARATGAATGHLSVLLGIFV 228 >gi|239981529|ref|ZP_04704053.1| anti-sigma factor antagonist [Streptomyces albus J1074] Length = 120 Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 5/72 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 G V AG + V + K ++DLS + D+ G +++ Sbjct: 7 GGWAVLHVAGELDLVSSPVVRQRVHDVVAK--GRHELVLDLSDVLFCDSSGVGVLIATRR 64 Query: 61 FMEKYHGKIKLQ 72 + G ++L Sbjct: 65 LIRSCQGSLRLI 76 >gi|307154202|ref|YP_003889586.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] gi|306984430|gb|ADN16311.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7822] Length = 118 Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 I AG + ISE +++ +++ S ++D++ + +D+ G + Sbjct: 10 IITIEPAGYITAANISEFQEELTLSL-TSGDHSVFLIDMTKVEFLDSAGLMALASAFRLA 68 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQR 100 EK + L + ++ +F L I + Sbjct: 69 EKLGKRFSLCSIPPSVKIIFELTQLDRVLDIYESREAF 106 >gi|239981069|ref|ZP_04703593.1| anti-sigma factor antagonist [Streptomyces albus J1074] gi|291452935|ref|ZP_06592325.1| anti-sigma factor antagonist [Streptomyces albus J1074] gi|291355884|gb|EFE82786.1| anti-sigma factor antagonist [Streptomyces albus J1074] Length = 113 Score = 36.9 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + TV G ++ + +V +N + +VD+ + +D+ G +++ ++ Sbjct: 11 DDRTVVEVGGEIDVYTAPKLREQLVELVND--GNFHLVVDMENVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|239908192|ref|YP_002954933.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] gi|239798058|dbj|BAH77047.1| anti-sigma factor antagonist family protein [Desulfovibrio magneticus RS-1] Length = 108 Score = 36.9 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 4/101 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + V R +G ++E +V + + LSA+ +D+ G ++ Sbjct: 9 DAALVVRVSGEIIMDAVTECRAEVEHLALAAAAPAVVVD-LSAVAFMDSSGVGFLIGLRR 67 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRS 101 + + + L + I++L +++ T P + Sbjct: 68 LCQDHGKTLSLANPTPPIKKLLAMLRLTDYFDAPPTGPAGA 108 >gi|225621091|ref|YP_002722349.1| anti-sigma factor antagonist [Brachyspira hyodysenteriae WA1] gi|225215911|gb|ACN84645.1| anti-sigma factor antagonist [Brachyspira hyodysenteriae WA1] Length = 111 Score = 36.9 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 EN + + G+ S++ D + I + + I+D+ + ID+ G + + + Sbjct: 9 ENNTVILKLDGDIDVYTSSDLKDSIFSQIE--LGAKKIIIDMEDVYYIDSSGIGVFISAL 66 Query: 63 ---EKYHGKIKLQGVSTHIEQLFSL 84 +K +GKI V+ ++++F L Sbjct: 67 GTFKKVNGKICFVKVTDPVKKVFEL 91 >gi|222151974|ref|YP_002561134.1| anti-sigma B factor antagonist [Macrococcus caseolyticus JCSC5402] gi|222121103|dbj|BAH18438.1| anti-sigma B factor antagonist [Macrococcus caseolyticus JCSC5402] Length = 107 Score = 36.9 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 AG + E+ + +V + +D +T +D+ G L + +++ + Sbjct: 16 INVAGELDVATVPELEEVLVPIRLQGTHDIHLRID--EVTYMDSTGLGLFVGTLKELNKN 73 Query: 69 IKL---QGVSTHIEQLFSLISFTHRKKIKNQKP 98 K GV+ IE+LF + + Sbjct: 74 NKELYVLGVNKRIERLFDITGLKDLMHVNQPVE 106 >gi|228984183|ref|ZP_04144365.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775470|gb|EEM23854.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 112 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--MVVDFTEVEYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|134098728|ref|YP_001104389.1| glucose-6-phosphate isomerase [Saccharopolyspora erythraea NRRL 2338] gi|291003586|ref|ZP_06561559.1| glucose-6-phosphate isomerase [Saccharopolyspora erythraea NRRL 2338] gi|133911351|emb|CAM01464.1| glucose-6-phosphate isomerase [Saccharopolyspora erythraea NRRL 2338] Length = 547 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-YFM 62 +G +G+W S + +A+ + + + S V + + +D A ++ Sbjct: 383 DGSIEVHPSGDWLSAGVGTVAEALRAFLATAPGSGYLSVQ-AYLDRLDDASAAVLRPELA 441 Query: 63 EKYHGK 68 + + Sbjct: 442 RRTGLQ 447 >gi|111225908|ref|YP_716702.1| anti-sigma-B factor antagonist [Frankia alni ACN14a] gi|111153440|emb|CAJ65197.1| Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Frankia alni ACN14a] Length = 113 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 2/84 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E TV G ++ + ++ + S S +VD+ + +D+ G +++ + Sbjct: 10 EGNHTVVVVGGEIDVYTAPKLREQLIDLV--SGGSYHLVVDMEGVEFLDSTGLGVLVGGL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86 ++ + E++ + Sbjct: 68 KRVRAHEGSLRLVCTQERILKIFR 91 >gi|317494030|ref|ZP_07952446.1| anti-anti-sigma factor [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917803|gb|EFV39146.1| anti-anti-sigma factor [Enterobacteriaceae bacterium 9_2_54FAA] Length = 104 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + G + DD + +DLS + +D+ G ++++ Sbjct: 14 TLKLIGILDRDSLMSFWDDRHTLLE-----GKKRLDLSGLERVDSAGLAMLVHVQNTDAT 68 Query: 68 KIKLQGVSTHIEQLFSLISF 87 ++ E+L +LI+ Sbjct: 69 GASQIVITGVSERLRTLIAL 88 >gi|296129154|ref|YP_003636404.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] gi|296020969|gb|ADG74205.1| anti-sigma-factor antagonist [Cellulomonas flavigena DSM 20109] Length = 116 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 30/93 (32%), Gaps = 1/93 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + G A + A+ + + +D A+T +D+ G +++ Sbjct: 16 GDVLHVVLTGPVDMVVRERDAPALWPALA-DPRVRTVDLDAGAVTFLDSSGLSVLVRLAR 74 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + + + ++ L+ T + + Sbjct: 75 DAAERGVVLRLVATSPRVDDLLEQTGVGEWMAR 107 >gi|157364499|ref|YP_001471266.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO] gi|157315103|gb|ABV34202.1| anti-sigma-factor antagonist [Thermotoga lettingae TMO] Length = 110 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 + + G++ + ++I + I S ++D+S + ID+ G ++ ++ Sbjct: 15 LICKIDGDFDAYHSADIKKMIKEQIETS-NHRKLVIDMSDVPYIDSAGLGTMVAILKDAR 73 Query: 67 GKIKLQGVSTHIEQLFSLISFTH 89 K +++ + + + T Sbjct: 74 NYGKEVILTSMRQNVKRIFEMTR 96 >gi|86742977|ref|YP_483377.1| anti-sigma-factor antagonist domain-containing protein [Frankia sp. CcI3] gi|86569839|gb|ABD13648.1| anti-sigma-factor antagonist (STAS) domain protein [Frankia sp. CcI3] Length = 113 Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 2/84 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E TV G ++ + ++ + S S +VD+ + +D+ G +++ + Sbjct: 10 EGNHTVVVVGGEIDVYTAPKLREQLIDLV--SGGSYHLVVDMEGVEFLDSTGLGVLVGGL 67 Query: 63 EKYHGKIKLQGVSTHIEQLFSLIS 86 ++ + E++ + Sbjct: 68 KRVRAHEGSLRLVCTQERILKIFR 91 >gi|149195631|ref|ZP_01872688.1| hypothetical protein LNTAR_17103 [Lentisphaera araneosa HTCC2155] gi|149141093|gb|EDM29489.1| hypothetical protein LNTAR_17103 [Lentisphaera araneosa HTCC2155] Length = 823 Score = 36.9 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 30/263 (11%), Positives = 74/263 (28%), Gaps = 34/263 (12%) Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVK 120 ++ Q + E+L + K+ +K + + + Sbjct: 417 LAQRDEKAGIAQPSNEEREKLSHEKAQVTSKREVFEKDPLKAAPKEVEKKSSVWQEHMKP 476 Query: 121 FIND----SCSQAHILGLVISNTGEFCASSYKFKGFLLSLIRQMYYVGVSGVP--VVILI 174 FIN+ + + + + F+ L+ + + +G++ + + Sbjct: 477 FINENWFMIAGLMLFIAGSLILSYFTWDKHWLFRYSLMPSLLASFTIGLAYLGKWIESKG 536 Query: 175 SFVTGAVIAQQGA-FQL--SQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSGSAIVAE 231 T + +GA QL F A ++ + ++ A+ ++ Sbjct: 537 KEFTSSATILRGAAIQLLPINFMAVALMSADTAVSYKHFLIPVMAALYLSL-------TW 589 Query: 232 IGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGA--------- 282 +G + M + + PR +I SL +L + + Sbjct: 590 LGLKR--------WCMAVSPQLNPLLPRTLLVINSLVMLAPITQIIGLESKHTLLMILGT 641 Query: 283 -SIVIWKYYDIPFAVFFSRFHST 304 + + F F R Sbjct: 642 GFYLGFALLSYSFHSFSLRVQQM 664 >gi|294340622|emb|CAZ89012.1| conserved hypothetical protein [Thiomonas sp. 3As] Length = 522 Score = 36.5 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R +G + A + +S+++D+ VDL A+ +D A ++ ++E Sbjct: 441 VRLSGKLS----GKDATFLRNLRAQSLRADTVYVDLQAVQRVDFAAATDLLNWVEAQTQL 496 Query: 69 IKLQGVSTHIEQLFSLISFT 88 K + L + Sbjct: 497 GKSIELRGAHTLLVPFLQSV 516 >gi|220934768|ref|YP_002513667.1| hypothetical protein Tgr7_1597 [Thioalkalivibrio sp. HL-EbGR7] gi|219996078|gb|ACL72680.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 114 Score = 36.5 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAE----LI 58 ++ R +G + +SE A + N ++ I+DLSA+ +++ G + Sbjct: 14 DDTSNTVRMSGALRLGGLSEYAPISELLENALDGREALIIDLSALEFLNSSGIATLSKFV 73 Query: 59 MYFMEKYHGKIKLQG 73 + + ++ +QG Sbjct: 74 ITARNRNDCRLAIQG 88 >gi|325179578|emb|CCA13976.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 472 Score = 36.5 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 7/86 (8%) Query: 246 TMGLDFVRILI-SPRIWALII--SLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFH 302 L + +LI PR+ LT+ +++ I A+F Sbjct: 238 VQALSPLPLLIYLPRLLYGTSLEQNVALTLPCAVLSVLILMIFCTWRLSHSAAMFTKS-- 295 Query: 303 STATLANIFTGLIKAPFMACAIGIVA 328 + F I+ + IG++ Sbjct: 296 --NNTTDFFQSFIRHGVLGLVIGVIG 319 >gi|228957368|ref|ZP_04119127.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802317|gb|EEM49175.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pakistani str. T13001] Length = 112 Score = 36.5 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|206968537|ref|ZP_03229493.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH1134] gi|229177532|ref|ZP_04304910.1| Anti-sigma factor antagonist [Bacillus cereus 172560W] gi|206737457|gb|EDZ54604.1| anti sigma b factor antagonist RsbV [Bacillus cereus AH1134] gi|228605894|gb|EEK63337.1| Anti-sigma factor antagonist [Bacillus cereus 172560W] Length = 112 Score = 36.5 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|310657326|ref|YP_003935047.1| anti sigma b factor antagonist rsbv [Clostridium sticklandii DSM 519] gi|308824104|emb|CBH20142.1| anti sigma b factor antagonist RsbV [Clostridium sticklandii] Length = 106 Score = 36.5 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 1/71 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 + G + +++ D +D S + ID+ G +++ +++ K Sbjct: 18 LKLGGEIDIYTSNNFKEELQKIYLSEETGD-VYIDASDLEYIDSAGLGVLIGALKRLKQK 76 Query: 69 IKLQGVSTHIE 79 K + Sbjct: 77 DKDIYIRETKP 87 >gi|298505400|gb|ADI84123.1| STAS domain protein [Geobacter sulfurreducens KN400] Length = 120 Score = 36.5 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 V G+ P E ++ A++ Q+ S VD+S ++ +D G +L+ Sbjct: 14 SGERYVLGVGGDLTIPFAGEFRGALLEALD---QAGSVEVDVSGVSAVDITGLQLLCSAH 70 Query: 63 EKY 65 Sbjct: 71 RAA 73 >gi|308505996|ref|XP_003115181.1| CRE-CHE-14 protein [Caenorhabditis remanei] gi|308259363|gb|EFP03316.1| CRE-CHE-14 protein [Caenorhabditis remanei] Length = 922 Score = 36.5 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 51/164 (31%), Gaps = 14/164 (8%) Query: 143 CASSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDL 202 + L S+++ V + V + +F + Q + IF+ Sbjct: 736 WWLMSTWFDLLSSIVQDCLSSVVGSLIFVAIFAF---IQLKFQAIAAVVTIAGVIFTSSA 792 Query: 203 MSILQLREIGVLLTAVMIAGRSGSAI-------VAEIGSMKINEEIDAIRTMGLDFVRIL 255 + L +G +L AV++ G + A I + G+ V + Sbjct: 793 IVTLLGWVLG-VLEAVILVLVVGLSFDYTLHYGAALPDLGCAEHRIREATSKGVGPVTLA 851 Query: 256 ISPRIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFS 299 A LP LT + +V+ + F+ FF Sbjct: 852 AFTSFLAGASMLPALTHAFYQVGV---FLVVISWTSWTFSTFFY 892 >gi|223940826|ref|ZP_03632657.1| anti-sigma-factor antagonist and glycosyl transferase [bacterium Ellin514] gi|223890503|gb|EEF57033.1| anti-sigma-factor antagonist and glycosyl transferase [bacterium Ellin514] Length = 491 Score = 36.5 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 12 AGNWKSPEISEIADDVVMAINKSIQSDS-AIVDLSAITEIDTIGAELIMYFME---KYHG 67 G + ++ +N + ++ ++DLS + ID+ G L++ + + Sbjct: 403 QGEITAANAEDVWQQTATQLNATDSANKHVLIDLSHVRFIDSTGLGLMVRVKKASLRLGI 462 Query: 68 KIKLQGVSTHIEQLFSLISFT 88 +++ G + + + +L Sbjct: 463 RLEFTGTQSAVRNVLTLARLE 483 >gi|146295516|ref|YP_001179287.1| anti-sigma-factor antagonist [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409092|gb|ABP66096.1| anti-sigma-factor antagonist [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 102 Score = 36.5 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 +SENGI V G + D + I+ S S IVD++ ++ ID+ G + + Sbjct: 9 VSENGI-VIELKGELDIFSSPTLKDKLYTLIDTS--SSDVIVDMNEVSYIDSTGLGVFVG 65 Query: 61 FMEK---YHGKIKLQGVSTHIEQLFSL 84 ++K I L+ + +++++F++ Sbjct: 66 ALKKSKQRGTNIVLKNLRPNVKKVFTI 92 >gi|328884277|emb|CCA57516.1| anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV [Streptomyces venezuelae ATCC 10712] Length = 144 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 TVF G I V A+ ++DLSA+ D+ G +++ + Sbjct: 21 TVFLVRGEMDLVTSPRIRRRVHDAVA--GGRHDLVIDLSAVRFCDSSGVGVLIAARRLLR 78 Query: 64 KYHGKIKLQ 72 G+++L Sbjct: 79 SCGGRLRLI 87 >gi|218896053|ref|YP_002444464.1| anti sigma b factor antagonist RsbV [Bacillus cereus G9842] gi|228943726|ref|ZP_04106128.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228976236|ref|ZP_04136715.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977710|ref|ZP_04138096.1| Anti-sigma factor antagonist [Bacillus thuringiensis Bt407] gi|218540848|gb|ACK93242.1| anti sigma b factor antagonist RsbV [Bacillus cereus G9842] gi|228782008|gb|EEM30200.1| Anti-sigma factor antagonist [Bacillus thuringiensis Bt407] gi|228783481|gb|EEM31581.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228815945|gb|EEM62168.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938730|gb|AEA14626.1| anti-sigma B factor antagonist [Bacillus thuringiensis serovar chinensis CT-43] Length = 112 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + V+ ++ +VD + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKVMPITSEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|254385645|ref|ZP_05000968.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194344513|gb|EDX25479.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 336 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 11/120 (9%), Positives = 27/120 (22%), Gaps = 5/120 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G W A+ + + ++ LS A L + E+ Sbjct: 95 TLSLKLPGEWTESGAGRRAEKLFTVRVDVWGEGAVLLALST-----YADAWLTLDLRERP 149 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFINDS 125 ++ + L + T + + + G + Sbjct: 150 QPEVAAENAPRLATALKRISELTGAETDPGDPTRHARPTAEGFGDLLAEGAEYDDSWGTF 209 >gi|146296667|ref|YP_001180438.1| anti-sigma-factor antagonist [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410243|gb|ABP67247.1| anti-sigma-factor antagonist [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 109 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G + R G M I S + ++D+S +T +D+ G ++ + Sbjct: 9 EGTLILRIRGELDQYNADRFRLRFDMKI-VSPEVQKVVIDISELTFMDSSGVGFLVGRFK 67 Query: 64 KYHG 67 Sbjct: 68 TARA 71 >gi|331696148|ref|YP_004332387.1| multi-sensor signal transduction histidine kinase [Pseudonocardia dioxanivorans CB1190] gi|326950837|gb|AEA24534.1| multi-sensor signal transduction histidine kinase [Pseudonocardia dioxanivorans CB1190] Length = 1859 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 4/50 (8%), Positives = 23/50 (46%) Query: 20 ISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGKI 69 ++ + + + + + ++DL+ +T + + G +++ + + + Sbjct: 1778 MAAVRGPLRAELAAAPPGSTTVLDLTGVTYLPSAGIGMLVDLIGEVRARG 1827 >gi|326443274|ref|ZP_08218008.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 971 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 18/155 (11%) Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 + TAV + + + +M + ++ MG+ + I AL+ L Sbjct: 65 MATAVGVNIWLAHRLRPPLSAMSLEQQSLDRYRMGIAPYKKWALLAITALV----GLIAG 120 Query: 274 ANFSA---IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI-GIVAM 329 A+ + I + + L + + A + ++A Sbjct: 121 ASATGQWRTWLMWIHGVPFGEKDPQFKLDVSFYAFDLP--WYRFLLGFGFAAVVLSLIAA 178 Query: 330 ------KEGFA-VGVHSNSLGKKVTT-CVVQSISI 356 G + + G V+ I + Sbjct: 179 ALTHYLYGGLRITSPGARATGAATGHLSVLLGIFV 213 >gi|254388964|ref|ZP_05004195.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197702682|gb|EDY48494.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 993 Score = 36.5 bits (83), Expect = 6.3, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 18/155 (11%) Query: 214 LLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTIL 273 + TAV + + + +M + ++ MG+ + I AL+ L Sbjct: 87 MATAVGVNIWLAHRLRPPLSAMSLEQQSLDRYRMGIAPYKKWALLAITALV----GLIAG 142 Query: 274 ANFSA---IIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAI-GIVAM 329 A+ + I + + L + + A + ++A Sbjct: 143 ASATGQWRTWLMWIHGVPFGEKDPQFKLDVSFYAFDLP--WYRFLLGFGFAAVVLSLIAA 200 Query: 330 ------KEGFA-VGVHSNSLGKKVTT-CVVQSISI 356 G + + G V+ I + Sbjct: 201 ALTHYLYGGLRITSPGARATGAATGHLSVLLGIFV 235 >gi|228906735|ref|ZP_04070607.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 200] gi|228852912|gb|EEM97694.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 200] Length = 112 Score = 36.5 bits (83), Expect = 6.4, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + +D+ G + + Sbjct: 9 LQNDLGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFTGVSKRLKRLFDITGLTE 98 >gi|302555047|ref|ZP_07307389.1| anti-sigma-B factor antagonist [Streptomyces viridochromogenes DSM 40736] gi|302472665|gb|EFL35758.1| anti-sigma-B factor antagonist [Streptomyces viridochromogenes DSM 40736] Length = 128 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 31/100 (31%), Gaps = 5/100 (5%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK- 64 V + + + + + ++DL ++ ID G ++ + Sbjct: 17 ARVVTLHDEIDLLTAPALRERLD--LLTAGPRPDLVLDLRPVSFIDCAGLGVLCRARNRV 74 Query: 65 --YHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 G+++L S + ++ ++ P + Sbjct: 75 LARRGRLRLVTDSGFLRRVLRHAGLAGVFEVLPGMPPQPR 114 >gi|225862938|ref|YP_002748316.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB102] gi|225788240|gb|ACO28457.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB102] Length = 112 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA---EL 57 + + + G + S++ + ++ ++ +VD + + +D+ G Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 66 Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 ++ ++K GK++ GVS +++LF + T Sbjct: 67 LLKAIKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|328882266|emb|CCA55505.1| anti-sigma factor antagonist [Streptomyces venezuelae ATCC 10712] Length = 142 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G V G + + +AD + A+ I+D S IT D+ A +M + + Sbjct: 49 GAQVVEAQGEYDLHSVGPLADALWRAVETHPM---VILDASRITFADSS-ALNLMLLVHR 104 Query: 65 YHGKIKLQGVSTHIEQL 81 GK+++ S +++L Sbjct: 105 T-GKLRVTAPSAQVQRL 120 >gi|311896981|dbj|BAJ29389.1| putative antagonist protein [Kitasatospora setae KM-6054] Length = 113 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N + +VD+ + +D+ G +++ ++ Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNYHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|154494150|ref|ZP_02033470.1| hypothetical protein PARMER_03496 [Parabacteroides merdae ATCC 43184] gi|154086012|gb|EDN85057.1| hypothetical protein PARMER_03496 [Parabacteroides merdae ATCC 43184] Length = 99 Score = 36.5 bits (83), Expect = 6.5, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 3 ENGI-TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ENG TV +G + ++ ++ + ++ + ++D + +T I + G L++ Sbjct: 6 ENGKETVINLSGQLDTLTSVDLEKEIAPIL--QGEAQTVVLDGAELTYISSAGLRLLLTL 63 Query: 62 ---MEKYHGKIKLQGVSTHIEQLFSLISFTH 89 M+ G +L+ + I ++ ++ F+H Sbjct: 64 QKGMKNKGGSFRLKNIQNEIMEILNITGFSH 94 >gi|254000414|ref|YP_003052477.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4] gi|253987093|gb|ACT51950.1| anti-sigma-factor antagonist [Methylovorus sp. SIP3-4] Length = 106 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G E +E + + Q + +DL+ +TEIDT G +L++ + Sbjct: 13 HVVIEGEMTIFEAAEYHAAL---LPPVTQCHTLELDLTNVTEIDTSGLQLLVSAKLRSQQ 69 Query: 68 KIKLQGVSTHIEQLFSLISFTH 89 ++ H E + ++ T Sbjct: 70 TGSTLSITGHSETVQQVLDATD 91 >gi|269957530|ref|YP_003327319.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] gi|269306211|gb|ACZ31761.1| anti-sigma-factor antagonist [Xylanimonas cellulosilytica DSM 15894] Length = 110 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 6/91 (6%) Query: 3 ENGITV-FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM-- 59 + G V AG + + +VDL A+ +D+ G ++ Sbjct: 7 DAGTYVALAPAGRLDLASAPRVKARIDDLARNGRA--RVVVDLGAVDHVDSSGLGALIAG 64 Query: 60 -YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + G +++ V + + L + Sbjct: 65 LKATRQAGGGLRIARVGEQVRAVLKLTNLDR 95 >gi|213619327|ref|ZP_03373153.1| putative anti-sigma factor antagonist [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 68 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 24/50 (48%) Query: 38 DSAIVDLSAITEIDTIGAELIMYFMEKYHGKIKLQGVSTHIEQLFSLISF 87 +DLS I+ +DT G L+ + + + + +S +++++L Sbjct: 8 GVTRIDLSQISRVDTGGLALLAHLVNQAKKQGNAVSLSGVNDKVYALAQL 57 >gi|295839324|ref|ZP_06826257.1| STAS domain-containing protein [Streptomyces sp. SPB74] gi|197696941|gb|EDY43874.1| STAS domain-containing protein [Streptomyces sp. SPB74] Length = 152 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + R G + + +++ A + I+DLS + D+ L++ + Sbjct: 61 LVRAFGELDLDTVGGLREELEAAAARYP---VVILDLSRVEFGDSGFLNLLIRV--RTTT 115 Query: 68 KIKLQGVSTHIEQLFSL 84 +++L + + QLF+L Sbjct: 116 RLRLVAPTESLRQLFAL 132 >gi|165871646|ref|ZP_02216291.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0488] gi|167635502|ref|ZP_02393815.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0442] gi|167638919|ref|ZP_02397193.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0193] gi|170687536|ref|ZP_02878752.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0465] gi|170707955|ref|ZP_02898404.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0389] gi|177653583|ref|ZP_02935757.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0174] gi|190566671|ref|ZP_03019588.1| anti sigma b factor antagonist RsbV [Bacillus anthracis Tsiankovskii-I] gi|227816154|ref|YP_002816163.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. CDC 684] gi|229603424|ref|YP_002865545.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0248] gi|164712547|gb|EDR18079.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0488] gi|167513049|gb|EDR88421.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0193] gi|167529120|gb|EDR91874.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0442] gi|170127115|gb|EDS95993.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0389] gi|170668349|gb|EDT19096.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0465] gi|172081387|gb|EDT66461.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0174] gi|190562223|gb|EDV16191.1| anti sigma b factor antagonist RsbV [Bacillus anthracis Tsiankovskii-I] gi|227005050|gb|ACP14793.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. CDC 684] gi|229267832|gb|ACQ49469.1| anti sigma b factor antagonist RsbV [Bacillus anthracis str. A0248] Length = 112 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ S + +VD + + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIM--PIASEKEVRIVVDFNKVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|302037674|ref|YP_003797996.1| putative anti-sigma-factor antagonist (fragment) [Candidatus Nitrospira defluvii] gi|300605738|emb|CBK42071.1| putative Anti-sigma-factor antagonist (fragment) [Candidatus Nitrospira defluvii] Length = 76 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 + + AG+ E+ + +++ A+ Q +DLS + ++D +L++ + Sbjct: 2 ILKPAGDLTIFEVGALYEEIKQAVTVHPQ---VELDLSEVDKLDASAIQLLIAV--RRSE 56 Query: 68 KIKLQGVSTHIEQLFSLISF 87 +I L G++ + + + Sbjct: 57 RIVLTGMTDPMRSRMAELGA 76 >gi|284032354|ref|YP_003382285.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836] gi|283811647|gb|ADB33486.1| anti-sigma-factor antagonist [Kribbella flavida DSM 17836] Length = 97 Score = 36.5 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 3/61 (4%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 + +G AG + A + A ++ +VDL+A+ +D+ G + Sbjct: 12 TADGRQTLTVAGEIDVSNAAAFATALSEASAETPP---LVVDLTAVEYLDSAGLAALFDH 68 Query: 62 M 62 Sbjct: 69 A 69 >gi|210630384|ref|ZP_03296432.1| hypothetical protein COLSTE_00316 [Collinsella stercoris DSM 13279] gi|210160515|gb|EEA91486.1| hypothetical protein COLSTE_00316 [Collinsella stercoris DSM 13279] Length = 104 Score = 36.5 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 8/83 (9%), Positives = 29/83 (34%), Gaps = 2/83 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G ++ + + +A+ + ++ +D S + ID+ G +++ Sbjct: 13 RYVVAVTGEIDISNADKLRNAIDLALEQ--PTERVELDFSQVAYIDSTGIGVLVGAAHHA 70 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 + + ++ + + Sbjct: 71 GERGRGFAITHAQPNVVRVAQLL 93 >gi|291437638|ref|ZP_06577028.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291340533|gb|EFE67489.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 129 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 27/105 (25%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V G E+S + D + ++ S + D+ + L+ Sbjct: 19 VLVLRGPVTRDEVSGLCDALRALLDGSGAGPVVVCDVGGLGPPGLAAVNLLARLQLTARR 78 Query: 68 KIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 + L L+ + +P++ + Sbjct: 79 AGGRIRLRDPSPALCVLLDLVGLRFEAEGQPEQREPPLGVEEAVE 123 >gi|134100727|ref|YP_001106388.1| anti-sigma-factor antagonist [Saccharopolyspora erythraea NRRL 2338] gi|133913350|emb|CAM03463.1| anti-sigma-factor antagonist [Saccharopolyspora erythraea NRRL 2338] Length = 103 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + V +G+ ++ D+ + + + +VDL+ + + G ++ ++ Sbjct: 7 VAVLSVSGDVDMVTAPQVEQDLAALLEQQPE--VLVVDLTEVGFFASAGLTALVAAYKQA 64 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G+ L+ V+T + L +KI Sbjct: 65 EGRTGLRVVATSSATVRPLKVTALDRKIP 93 >gi|134754|sp|P26777|SP2AA_BACLI RecName: Full=Anti-sigma F factor antagonist; AltName: Full=Stage II sporulation protein AA gi|304171|gb|AAA22795.1| sporulation protein [Bacillus licheniformis] Length = 117 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 10/97 (10%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R G + V + +++L+ ++ +D+ G +++ + Sbjct: 13 VLCIRLTGELDHHTAETLRKQVSGHLE-QTDIRHIVMNLADLSFMDSSGLGVVLGRYKEI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 ++ G++ + +S +++LF + +++ + + Sbjct: 72 KQLGGEMIVCAISPAVKRLFDMSGLFKIIRLEQSEQR 108 >gi|328885084|emb|CCA58323.1| Inducers of aerial mycelium formation biosynthesis protein BldG [Streptomyces venezuelae ATCC 10712] Length = 107 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 5/83 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DL+ + D G +IM Sbjct: 4 RGDHVELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLTGLDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLF 82 + ++ L+GV +++L Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLL 84 >gi|300782226|ref|YP_003762517.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299791740|gb|ADJ42115.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 117 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 8/93 (8%), Positives = 28/93 (30%), Gaps = 3/93 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 G ++ + + + ++ + DL+ +T D+ +++ + + Sbjct: 26 VVVTGELDLLTSPQLQEAL-AGLIADKRAQRVVADLTGVTFFDSSALNVVLRAQRQAGEQ 84 Query: 69 IKLQGV--STHIEQLFSLISFTHRKKIKNQKPQ 99 V S + ++ L + Sbjct: 85 DVELAVVPSPAVSRVIELTGVAEHLSVSEDPQA 117 >gi|302560081|ref|ZP_07312423.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302477699|gb|EFL40792.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 126 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 5/69 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 V R +G + V + + S ++DLS + D+ G +++ + Sbjct: 16 AVLRVSGELDLMTSPVLRQRVHDVVAE--GRHSLVLDLSEVWFCDSSGVGVLIASRRLLR 73 Query: 64 KYHGKIKLQ 72 G ++L Sbjct: 74 SCQGNLRLI 82 >gi|229819126|ref|YP_002880652.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] gi|229565039|gb|ACQ78890.1| anti-sigma-factor antagonist [Beutenbergia cavernae DSM 12333] Length = 117 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G+ V G + +++ A+ + +VDLS + ID+ G +++ Sbjct: 10 RSGVPVVSVTGEVDVYTGPVLREELEKALARGTTG--VVVDLSGVAFIDSTGLGVLVTAH 67 Query: 63 EKYHGKI 69 + + Sbjct: 68 RQLASRG 74 >gi|297192030|ref|ZP_06909428.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] gi|197719520|gb|EDY63428.1| anti-sigma factor antagonist [Streptomyces pristinaespiralis ATCC 25486] Length = 107 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 G ++ + A++ + ++DL+ + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTVLHSAVDD--GAGDLVLDLTHLDSWDATGLGVIMGAH 61 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + ++ L+GV +++L Sbjct: 62 RRAGRCGRRLVLRGVPPQMQRLLVATRLHR 91 >gi|254388760|ref|ZP_05003993.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|294813372|ref|ZP_06772015.1| Anti-sigma-B factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|326441799|ref|ZP_08216533.1| anti-sigma-factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|60687275|gb|AAX35717.1| BldG [Streptomyces clavuligerus ATCC 27064] gi|197702480|gb|EDY48292.1| anti-sigma factor antagonist [Streptomyces clavuligerus ATCC 27064] gi|294325971|gb|EFG07614.1| Anti-sigma-B factor antagonist [Streptomyces clavuligerus ATCC 27064] Length = 117 Score = 36.5 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95 >gi|313115502|ref|ZP_07800967.1| STAS domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622212|gb|EFQ05702.1| STAS domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 105 Score = 36.5 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 4/86 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + AG + + A+ + I+D + +D+ G LI+ Sbjct: 10 GDVLYAYLAGEIDHDAAQSLRIQLDDALVSR-APQTMILDFGGVGFMDSSGVGLILGRQR 68 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 +++Q + +E++ L Sbjct: 69 IARTLGTALRVQHTPSQLEKVLQLAR 94 >gi|300856560|ref|YP_003781544.1| putative anti-sigma factor F antagonist [Clostridium ljungdahlii DSM 13528] gi|300436675|gb|ADK16442.1| predicted anti-sigma factor F antagonist [Clostridium ljungdahlii DSM 13528] Length = 111 Score = 36.5 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 37/84 (44%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + + G E+ + + +++ + I+D S ++ +D+ G +++ + Sbjct: 9 DNKLIVYMRGELDHHSAEEVRNKIDDRLDRE-SLNKLIMDFSGVSFMDSSGIGVVIGRYK 67 Query: 64 KYH---GKIKLQGVSTHIEQLFSL 84 K + G + + G ++++F L Sbjct: 68 KLNSADGSVCIVGAINSVKRVFEL 91 >gi|75761674|ref|ZP_00741620.1| Anti-sigma B factor antagonist [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899670|ref|ZP_04063923.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 4222] gi|74490830|gb|EAO54100.1| Anti-sigma B factor antagonist [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228859979|gb|EEN04386.1| Anti-sigma factor antagonist [Bacillus thuringiensis IBL 4222] Length = 112 Score = 36.5 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ N+ +VD + +D+ G + + Sbjct: 9 LQNDLGYTVQLNGEIDAYTASDLKNKIMPIANEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|271968765|ref|YP_003342961.1| hypothetical protein Sros_7537 [Streptosporangium roseum DSM 43021] gi|270511940|gb|ACZ90218.1| hypothetical protein Sros_7537 [Streptosporangium roseum DSM 43021] Length = 121 Score = 36.5 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 +V G+ + + + + + I+D + + D+ G ++ M + + Sbjct: 15 SVVSLIGDLDKLSAPQFEEALAGLLTQGRV--RIIIDTAGLGFCDSTGVWALLTTMRRAY 72 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQ 99 + ++ L L+ T + P Sbjct: 73 EQNGWLRLAGVHGFLGRLLELTRLGEAFPIDPD 105 >gi|261419869|ref|YP_003253551.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61] gi|319766684|ref|YP_004132185.1| sulfate transporter/antisigma-factor antagonist STAS [Geobacillus sp. Y412MC52] gi|261376326|gb|ACX79069.1| anti-sigma-factor antagonist [Geobacillus sp. Y412MC61] gi|317111550|gb|ADU94042.1| Sulfate transporter/antisigma-factor antagonist STAS [Geobacillus sp. Y412MC52] Length = 141 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 36/119 (30%), Gaps = 4/119 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 + G + A+ ++ +VD+S + +D+ G L++ F ++ Sbjct: 21 IKLTGRLAYDTQLAAEQKLATAVAA-VKRRLVVVDVSGLRFLDSTGLALLVRFFKQIVSE 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + + L++ R Q+ + + + + Sbjct: 80 SRAMAIVVRDNAAIEKILLMAKLDRLLPIVGDEQQLLSLAPPSSFDHISQEALYSAWRQ 138 >gi|218437394|ref|YP_002375723.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424] gi|218170122|gb|ACK68855.1| anti-sigma-factor antagonist [Cyanothece sp. PCC 7424] Length = 118 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 11/115 (9%), Positives = 41/115 (35%), Gaps = 4/115 (3%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI-- 58 + + I G + I++ + + + ++ + +VD++ + +D+ G + Sbjct: 5 LETDTIVTLEPTGYLTAANITQFQEQLTLNVS-DPEKSIFLVDMTQVEFLDSAGLMALAS 63 Query: 59 -MYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHY 112 + + + + ++ +F L I + + N +++ Sbjct: 64 ACRLAQSLDKQFSICSIPPSVKIIFELTQLDRFLDIYDNRETFEATLNQTQDIAA 118 >gi|56420164|ref|YP_147482.1| stage II sporulation protein AA [Geobacillus kaustophilus HTA426] gi|56380006|dbj|BAD75914.1| stage II sporulation protein AA [Geobacillus kaustophilus HTA426] Length = 141 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 + G + A+ ++ +VD+S + +D+ G L++ F ++ Sbjct: 21 IKLTGRLAYDTQLAAEQKLATAVAA-VKRRLVVVDVSGLRFLDSTGLALLVRFFKQ 75 >gi|291006470|ref|ZP_06564443.1| anti-sigma-factor antagonist [Saccharopolyspora erythraea NRRL 2338] Length = 113 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + V +G+ ++ D+ + + + +VDL+ + + G ++ ++ Sbjct: 17 VAVLSVSGDVDMVTAPQVEQDLAALLEQQPE--VLVVDLTEVGFFASAGLTALVAAYKQA 74 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIK 94 G+ L+ V+T + L +KI Sbjct: 75 EGRTGLRVVATSSATVRPLKVTALDRKIP 103 >gi|194216558|ref|XP_001490020.2| PREDICTED: similar to Putative sodium-coupled neutral amino acid transporter 10 [Equus caballus] Length = 1416 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 29/304 (9%), Positives = 77/304 (25%), Gaps = 25/304 (8%) Query: 55 AELIMYFMEKYHGKIKLQGVSTHIEQL--------------FSLISFTHRKKIKNQKPQR 100 A L+ + + + +L + + +Q Sbjct: 323 ASLLWTLARAHRAQQRASRAPALSLRLEGRDAGPGASCGIVLGALLLVFCSWMTHQSCMF 382 Query: 101 SFFYNSFKNLHYHIGKKIVKFINDSCSQAH--ILGLVISNTGEFCASSYKFKGFLLSLIR 158 S + G + + ++GL++ F + + Sbjct: 383 LVKSASLSKRRTYAGLALHAYGKAGKMLVETSMIGLMLGTCAAFYVVIGDLGSNFFARLF 442 Query: 159 QMYYVGVSGVPVVILISFVTGAVIAQQ--GAFQLSQFGAEIFSIDLMSILQLREIGVLLT 216 G V ++ ++S ++ Q + F A + + + + L Sbjct: 443 GFQVTGTFRVLLLFVVSLCIVLPLSLQRNMMASIQSFSAMALIFYTVFMFVI--LLSSLK 500 Query: 217 AVMIAGR--SGSAIVAEIGSMK---INEEIDAIRTMGLDFVRILISPRIWALIISLPLLT 271 + G+ + V G + I A ++ L L P + + Sbjct: 501 HGLFGGQWLQRVSYVRWDGIFRCIPIFGMSFACQSQVLPTYDSLDEPSVKTMSSIFASSL 560 Query: 272 ILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIVAMKE 331 + ++ + + F S I G + + + + I+ ++ Sbjct: 561 NVVTTFYVMVGFFGYVSFAEATAGNVLMHFPSNLVTEMIRVGFMMSVAVGFPMMILPCRQ 620 Query: 332 GFAV 335 Sbjct: 621 ALNT 624 >gi|29830470|ref|NP_825104.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29607582|dbj|BAC71639.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 125 Score = 36.5 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 5/107 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELI---MYFME 63 V G + + V + ++DL ++ +D+ G ++ M Sbjct: 18 AVVVLTGEVDCDLTPALREAVDSLTAED--HGLIVLDLGQVSFMDSAGLGVVVYGMRRAG 75 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNL 110 G+++L G + +L L ++ P + + K L Sbjct: 76 ALGGRLRLAGPGEQVRELLRLTGLDAAVEVFGDVPAACAYGPTPKGL 122 >gi|297561593|ref|YP_003680567.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846041|gb|ADH68061.1| anti-sigma-factor antagonist [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 107 Score = 36.5 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 2/83 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 V G+ S + +V + +S +DLS + D+ G ++ + Sbjct: 14 GPVLDVTGSLDYDHASTLRHEVRLLALES--GQCLSIDLSGLDFCDSSGISALLAARQHA 71 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 + ++S Sbjct: 72 LAAGADIALLAVPANTLRIMSMV 94 >gi|218233542|ref|YP_002365764.1| anti sigma b factor antagonist RsbV [Bacillus cereus B4264] gi|228951466|ref|ZP_04113572.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068651|ref|ZP_04201949.1| Anti-sigma factor antagonist [Bacillus cereus F65185] gi|229078302|ref|ZP_04210866.1| Anti-sigma factor antagonist [Bacillus cereus Rock4-2] gi|218161499|gb|ACK61491.1| anti sigma b factor antagonist RsbV [Bacillus cereus B4264] gi|228704977|gb|EEL57399.1| Anti-sigma factor antagonist [Bacillus cereus Rock4-2] gi|228714398|gb|EEL66275.1| Anti-sigma factor antagonist [Bacillus cereus F65185] gi|228808173|gb|EEM54686.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 112 Score = 36.5 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + V+ ++ +VD + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKVMPITSEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFTGVSKRLKRLFDITGLTE 98 >gi|66047364|ref|YP_237205.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae B728a] gi|289676094|ref|ZP_06496984.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae FF5] gi|63258071|gb|AAY39167.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae B728a] gi|330895262|gb|EGH27600.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. japonica str. M301072PT] gi|330937999|gb|EGH41780.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. pisi str. 1704B] gi|330969697|gb|EGH69763.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. aceris str. M302273PT] gi|330981138|gb|EGH79241.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 101 Score = 36.5 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G ++ A+ KS +D S + + ++G L++ FM Sbjct: 14 LRLIGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDARDA 72 Query: 69 IKLQGVSTHIEQLFSLIS 86 K + + E + + Sbjct: 73 GKSMTLRSLPEDMRQIAR 90 >gi|89895048|ref|YP_518535.1| hypothetical protein DSY2302 [Desulfitobacterium hafniense Y51] gi|219669459|ref|YP_002459894.1| anti-sigma-factor antagonist [Desulfitobacterium hafniense DCB-2] gi|89334496|dbj|BAE84091.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219539719|gb|ACL21458.1| anti-sigma-factor antagonist [Desulfitobacterium hafniense DCB-2] Length = 115 Score = 36.5 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + G + + I + + I++L I+ ID+ G +I+ +K Sbjct: 11 TLLLTLKGELDMNTSESLRQTIDSEIERR-GVRTVILNLEDISFIDSSGLGVILGRYKKL 69 Query: 66 ---HGKIKLQGVSTHIEQLFSL 84 GK+ + V HI ++ L Sbjct: 70 LPMGGKVIITRVPPHIYKIMEL 91 >gi|325001315|ref|ZP_08122427.1| hypothetical protein PseP1_21247 [Pseudonocardia sp. P1] Length = 122 Score = 36.5 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G V G + + + + + +VDL+ +T + + G ++ E Sbjct: 22 DGAVVVHVHGEIDTMTAPVVRQRLA---GQIPAASLLVVDLTRVTFLGSAGLAALVEAKE 78 Query: 64 KYHGKIKLQGV 74 K G + Sbjct: 79 KAEGDGSRLRL 89 >gi|302544272|ref|ZP_07296614.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Streptomyces hygroscopicus ATCC 53653] gi|302461890|gb|EFL24983.1| anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) [Streptomyces himastatinicus ATCC 53653] Length = 113 Score = 36.5 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSYHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|282866277|ref|ZP_06275323.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] gi|282558863|gb|EFB64419.1| anti-sigma-factor antagonist [Streptomyces sp. ACTE] Length = 136 Score = 36.5 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM---EK 64 V G + + + A+ + +VD S + D+ G +++ E Sbjct: 40 VVTPVGELDHHTADLLREPLESAVEQGRA--RLVVDCSGLEFCDSTGLNVLLGARLKAEA 97 Query: 65 YHGKIKLQGVSTHIEQLFSLISFT 88 G + L G+ + ++F + Sbjct: 98 AGGGVHLAGMQPVVARVFEITGAE 121 >gi|256377261|ref|YP_003100921.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255921564|gb|ACU37075.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 114 Score = 36.5 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 2/80 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +G+ V R +G ++ V+ + + +VDLS +T + G + Y + Sbjct: 15 DGVAVVRASGEIDMANSDDL--RVIATDLVDGGAQALVVDLSEVTFFASSGIAALAYLRD 72 Query: 64 KYHGKIKLQGVSTHIEQLFS 83 + + S + + Sbjct: 73 RVGRGLVRAVPSRSVRRSLE 92 >gi|196044217|ref|ZP_03111453.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB108] gi|196024856|gb|EDX63527.1| anti sigma b factor antagonist RsbV [Bacillus cereus 03BB108] Length = 111 Score = 36.5 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 8 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97 >gi|158425837|ref|YP_001527129.1| anti-sigma factor antagonist [Azorhizobium caulinodans ORS 571] gi|158332726|dbj|BAF90211.1| anti-sigma factor antagonist [Azorhizobium caulinodans ORS 571] Length = 100 Score = 36.5 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 TV + +G + ++ A+ S + + IVD++ + + + G ++ Sbjct: 8 SGEDTVLKVSGRLDTLNAKPFEGKLLEAVKAS--NGAIIVDMAGVDYVSSSGLRALLVAG 65 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSL 84 M + K++L+ + I+++F + Sbjct: 66 KAMSPHKRKLRLKTLQPQIQEVFDI 90 >gi|218887528|ref|YP_002436849.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758482|gb|ACL09381.1| anti-sigma-factor antagonist [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 111 Score = 36.5 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G+TV F+G + ++ + + ++ ++D+ I I + G I+ + Sbjct: 8 RGGVTVLAFSGRMDATTVAAFDEAWRARLEA--GANRLVIDMGGIEYISSAGLRGILGLL 65 Query: 63 EKY 65 + Sbjct: 66 KAC 68 >gi|229042832|ref|ZP_04190568.1| Anti-sigma factor antagonist [Bacillus cereus AH676] gi|229108565|ref|ZP_04238178.1| Anti-sigma factor antagonist [Bacillus cereus Rock1-15] gi|228674896|gb|EEL30127.1| Anti-sigma factor antagonist [Bacillus cereus Rock1-15] gi|228726492|gb|EEL77713.1| Anti-sigma factor antagonist [Bacillus cereus AH676] Length = 112 Score = 36.5 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPITSEKEVH--IVVDFHNVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|226329327|ref|ZP_03804845.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198] gi|225202513|gb|EEG84867.1| hypothetical protein PROPEN_03232 [Proteus penneri ATCC 35198] Length = 69 Score = 36.5 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 1/41 (2%) Query: 295 AVFFSRFHSTATLA-NIFTGLIKAPFMACAIGIVAMKEGFA 334 F++ ++ IK+ A + +A+ G Sbjct: 9 GFFWASMQGAVEWRLDLVNCFIKSVVFAITVTWIALLTGMT 49 >gi|114567573|ref|YP_754727.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338508|gb|ABI69356.1| anti-sigma F factor antagonist (stage II sporulation protein AA) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 99 Score = 36.5 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 7/70 (10%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 E+ AG S ++ ++ ++ + + ++D + + + + G +I+ Sbjct: 8 EDRKLTIALAGRLDSNSAPQLEAELKESV---VDINDLVLDFAELVYLSSAGLRVILAAQ 64 Query: 63 EKYHGKIKLQ 72 ++ + + ++ Sbjct: 65 KQMNKQGRMV 74 >gi|156741180|ref|YP_001431309.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941] gi|156232508|gb|ABU57291.1| anti-sigma-factor antagonist [Roseiflexus castenholzii DSM 13941] Length = 116 Score = 36.5 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 32/86 (37%), Gaps = 11/86 (12%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH- 66 + G + ++ ++ ++DLS + + + G +++ ++ Sbjct: 13 LLTITGRLDAMNAPQLKQKFDELFEQNRY--RIVLDLSGLEYVASPGLRVLIEARKRARD 70 Query: 67 --------GKIKLQGVSTHIEQLFSL 84 G +++ + I+++F L Sbjct: 71 WKLTDLEGGDVRIANLPPRIKEVFDL 96 >gi|52144329|ref|YP_082497.1| anti-sigma B factor antagonist [Bacillus cereus E33L] gi|51977798|gb|AAU19348.1| anti-sigma B factor antagonist [Bacillus cereus E33L] Length = 111 Score = 36.5 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 8 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 65 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 66 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 97 >gi|257483482|ref|ZP_05637523.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330888610|gb|EGH21271.1| STAS domain-containing protein [Pseudomonas syringae pv. mori str. 301020] gi|330987101|gb|EGH85204.1| STAS domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011545|gb|EGH91601.1| STAS domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 101 Score = 36.5 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G ++ A+ KS +D S + + ++G L++ FM Sbjct: 14 LRLIGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDAQEA 72 Query: 69 IKLQGVSTHIEQLFSLIS 86 K V + E + + Sbjct: 73 GKSITVRSLPEDMRQIAR 90 >gi|213404890|ref|XP_002173217.1| amino acid permease [Schizosaccharomyces japonicus yFS275] gi|212001264|gb|EEB06924.1| amino acid permease [Schizosaccharomyces japonicus yFS275] Length = 588 Score = 36.5 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 4/160 (2%) Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGR 223 G G V + + + A + G + + + R +G + + I Sbjct: 268 GFKGFCSVFITAAFSLAGVEIIGIAAGQTKNPQKAIPGALKRVFYRILGFFVITLFIVSL 327 Query: 224 SGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGAS 283 + + + +G+ + + + + I + P I +I + +L++ + + Sbjct: 328 NVAYNDSRLGTQSGFHNVTSPFILAIQDGGIRVLPDIVNAVILISILSVANTSVFMASNT 387 Query: 284 IVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACA 323 I VF + + GL Sbjct: 388 IYGMALSHQAPPVFTYVNKHGLPV--VAVGL--CFAFGFL 423 >gi|297159262|gb|ADI08974.1| anti-sigma-factor antagonist [Streptomyces bingchenggensis BCW-1] Length = 113 Score = 36.5 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N + +VD+ + +D+ G +++ ++ Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNYHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|271968844|ref|YP_003343040.1| anti-anti-sigma regulatory factor-like protein [Streptosporangium roseum DSM 43021] gi|270512019|gb|ACZ90297.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)-like protein [Streptosporangium roseum DSM 43021] Length = 121 Score = 36.5 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 4/87 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM--- 62 V + +G + ++ A ++Q+ + I+DLSA+T D+ G ++ Sbjct: 21 TLVVQASGELDHYHTPVLRAEMNRA-WNALQAPTLILDLSALTFCDSSGIGELLQARHHG 79 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + + G+ ++ + +L T Sbjct: 80 QVEGVRFIITGIQGNLARRLNLAGLTQ 106 >gi|152989231|ref|YP_001350360.1| hypothetical protein PSPA7_5024 [Pseudomonas aeruginosa PA7] gi|150964389|gb|ABR86414.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 102 Score = 36.5 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + E + G + + I+ S Q+ +VD SA+ ++G L++ Sbjct: 6 LREGAPGELQLVGVLDYSSGPALREQGGRLIHAS-QAAQLVVDCSAVERSSSVGISLLLA 64 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSLIS 86 FM K + + + + Sbjct: 65 FMRDARKAGKTLSIRALPDDMREIAK 90 >gi|71734607|ref|YP_276263.1| STAS domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555160|gb|AAZ34371.1| STAS domain protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322483|gb|EFW78576.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|320330048|gb|EFW86035.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330875105|gb|EGH09254.1| STAS domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 101 Score = 36.5 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G ++ A+ KS +D S + + ++G L++ FM Sbjct: 14 LRLMGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDAQEA 72 Query: 69 IKLQGVSTHIEQLFSLIS 86 K V + E + + Sbjct: 73 GKSITVRSLPEDMRQIAR 90 >gi|83589259|ref|YP_429268.1| anti-sigma-factor antagonist domain-containing protein [Moorella thermoacetica ATCC 39073] gi|83572173|gb|ABC18725.1| anti-sigma-factor antagonist (STAS) domain protein [Moorella thermoacetica ATCC 39073] Length = 109 Score = 36.5 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 24/85 (28%), Gaps = 4/85 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 N G + + I++LS ++ ID+ G ++ + Sbjct: 10 NDSRCLNLKGELDMETLPMLE----RMAEAREGEGRLIINLSGVSFIDSTGLRGLLTIQQ 65 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 ++ K ++ + Sbjct: 66 EWAAKGGRVHFLNPCPEVAEVFRLV 90 >gi|289643667|ref|ZP_06475779.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata] gi|289506500|gb|EFD27487.1| anti-sigma-factor antagonist [Frankia symbiont of Datisca glomerata] Length = 113 Score = 36.1 bits (82), Expect = 7.8, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E T+ G ++ + ++ + S S +VD+ + +D+ G +++ Sbjct: 9 TEGDFTIVVVGGEIDVYTAPKLREQLIDLV--SGGSYHLVVDMEGVEFLDSTGLGVLVGG 66 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLIS 86 +++ + E++ + Sbjct: 67 LKRVRAHEGTLRLVCTQERILKIFR 91 >gi|73994396|ref|XP_857514.1| PREDICTED: similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 2 isoform 8 [Canis familiaris] Length = 804 Score = 36.1 bits (82), Expect = 7.8, Method: Composition-based stats. Identities = 29/286 (10%), Positives = 82/286 (28%), Gaps = 49/286 (17%) Query: 58 IMYFMEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKK 117 + + G + + S ++ K+ + + F F+N+ G Sbjct: 335 LHELRRALEEGSRESGAT-----IPSFMNTIPTKETPPTLIRTNKFTEGFQNIVDAYGVG 389 Query: 118 IVKFINDSCS--------QAHILGLV------ISNTGEFCASSYKFKGFLLSLIRQMYYV 163 + +N + A + G + + I +M++ Sbjct: 390 SYREVNPALFTIITFPFLFAVMFGDFGHGFVMFLFALLLVINENHPRLNQSQEIMRMFFN 449 Query: 164 GVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSI--DLMSILQLREIGVLLTAVMIA 221 G + ++ L S TG + + ++ FG+ +++ ++ ++ + V Sbjct: 450 GRYILLLMGLFSVYTGLIYNDCFSKSVNLFGSGWNVSHRNMVLWNRVLQLDPSVPGV--- 506 Query: 222 GRSGSAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIG 281 +G+D + L + R+ L ++++ + Sbjct: 507 -------------------FQGPYPLGIDPIWNLATNRLTFLNSFKMKMSVILGIIHMTF 547 Query: 282 ASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAPFMACAIGIV 327 I+ + F ++ + L I ++ Sbjct: 548 GVILGIFNHLHFRKKFNIYL---VSVPELLFML---CIFGYLIFMI 587 >gi|284052603|ref|ZP_06382813.1| anti-sigma-factor antagonist [Arthrospira platensis str. Paraca] gi|291572095|dbj|BAI94367.1| anti-sigma factor antagonist [Arthrospira platensis NIES-39] Length = 116 Score = 36.1 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + + + + G + + S+ D+ + K + + ++D +T +D+ G ++ + Sbjct: 9 SSDVQILQPQGILDATKASQFRQDISRLVEK--GAKTILIDFQDVTFMDSSGLGALVLAL 66 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + + + EQ+ L T ++ Sbjct: 67 KTVRAADSKLVICSINEQIRILFELTSMDRVFQP 100 >gi|320010408|gb|ADW05258.1| anti-sigma-factor antagonist [Streptomyces flavogriseus ATCC 33331] Length = 122 Score = 36.1 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 5/90 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 +E V G + + + A+ +VD S + D+ G +++ Sbjct: 20 TEGRSEVVTPVGELDHHTADLLREPLESAVEHGRT--RLVVDCSGLDFCDSTGLNVLLGA 77 Query: 62 M---EKYHGKIKLQGVSTHIEQLFSLISFT 88 E G + L G+ + ++F + Sbjct: 78 RLKAEAAGGAVHLAGMQPVVARVFEITGAE 107 >gi|170077903|ref|YP_001734541.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002] gi|169885572|gb|ACA99285.1| anti-anti-sigma factor [Synechococcus sp. PCC 7002] Length = 109 Score = 36.1 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIG---AELIM 59 +N I VF G + + + E DD++ +I + + + ++D + IT +D+ G L++ Sbjct: 2 DNKIAVFHPTGIFDNIKSLEFKDDLLKSIIEE-KKEVVVLDFAGITFMDSAGLGSLVLLL 60 Query: 60 YFMEKYHGKIKLQGVSTHIEQLFSLISFTH 89 + + K+ L V+ ++ LF L + Sbjct: 61 KTVRSHGAKMILCNVNEQVQMLFELTNMNR 90 >gi|302542613|ref|ZP_07294955.1| putative anti-sigma factor antagonist [Streptomyces hygroscopicus ATCC 53653] gi|302460231|gb|EFL23324.1| putative anti-sigma factor antagonist [Streptomyces himastatinicus ATCC 53653] Length = 143 Score = 36.1 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G TV G ++ + + A ++ +VDL+ T D G L+ Sbjct: 42 GGYTVVALHGEIDIAGLAGVGPALDAATGA--RAPEVVVDLTPTTFFDCSGLGLLCRAHR 99 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + + + Sbjct: 100 RVAERGGRLRLVCDDPLILRTLR 122 >gi|271968770|ref|YP_003342966.1| hypothetical protein Sros_7543 [Streptosporangium roseum DSM 43021] gi|270511945|gb|ACZ90223.1| hypothetical protein Sros_7543 [Streptosporangium roseum DSM 43021] Length = 108 Score = 36.1 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 36/96 (37%), Gaps = 5/96 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF-- 61 +G V G+ +A V ++ ++ ++ + D+ G ++ Sbjct: 12 DGSRVIIPIGDLDRDAADTLATAVNESLAHPP--GRLVIQMTHVQFCDSSGIVTLLDAHA 69 Query: 62 -MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQ 96 + ++ L GVS H+ LF + + +I + Sbjct: 70 DAAQLGTELVLAGVSDHLRALFQICALDQVVRIVEE 105 >gi|117620108|ref|YP_857041.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561515|gb|ABK38463.1| anti-anti-sigma factor family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 106 Score = 36.1 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 4/71 (5%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 +G + ++ D++ +N +DL+ + +D GA+LI ++ Sbjct: 12 VTATLSGELSVITLGDLQDELFGLLN----FSVLTLDLTPLEMLDGCGAQLIAILQQEAG 67 Query: 67 GKIKLQGVSTH 77 + K + Sbjct: 68 QQGKQLRLEAA 78 >gi|56751980|ref|YP_172681.1| anti-sigma f factor antagonist [Synechococcus elongatus PCC 6301] gi|81300930|ref|YP_401138.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus elongatus PCC 7942] gi|56686939|dbj|BAD80161.1| similar to anti-sigma f factor antagonist [Synechococcus elongatus PCC 6301] gi|81169811|gb|ABB58151.1| anti-anti-sigma regulatory factor, SpoIIAA [Synechococcus elongatus PCC 7942] Length = 130 Score = 36.1 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + +FR G + + ++ + AI+DLS I ID+ G ++ Sbjct: 26 RDDYQLFRLTGQLDAFSEPTFRKVLGKSLEDGPKH--AILDLSKIDFIDSSGLGALVQLA 83 Query: 63 EKY 65 ++ Sbjct: 84 KQA 86 >gi|24213539|ref|NP_711020.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45658618|ref|YP_002704.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194323|gb|AAN48038.1| anti-sigma factor antagonist [Leptospira interrogans serovar Lai str. 56601] gi|45601862|gb|AAS71341.1| anti-sigma factor antagonist [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 110 Score = 36.1 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 +G+ + G +E+ +++ I+ I+++ + + + G + + Sbjct: 7 RDGVLIVYLKGRLDVSIANEVEENLNDLIDNQ-GHKKVILNMQEVDYMSSSGFRACISTL 65 Query: 63 EKYH---GKIKLQGVSTHIEQLFSLISFT 88 K + G +K+ + ++++F +I T Sbjct: 66 RKLNSKEGALKISNIKPAVKRIFDVIELT 94 >gi|291453380|ref|ZP_06592770.1| anti-sigma factor antagonist [Streptomyces albus J1074] gi|291356329|gb|EFE83231.1| anti-sigma factor antagonist [Streptomyces albus J1074] Length = 124 Score = 36.1 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 5/72 (6%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 G V AG + V + K ++DLS + D+ G +++ Sbjct: 11 GGWAVLHVAGELDLVSSPVVRQRVHDVVAK--GRHELVLDLSDVLFCDSSGVGVLIATRR 68 Query: 61 FMEKYHGKIKLQ 72 + G ++L Sbjct: 69 LIRSCQGSLRLI 80 >gi|226943417|ref|YP_002798490.1| STAS family protein [Azotobacter vinelandii DJ] gi|226718344|gb|ACO77515.1| STAS family protein [Azotobacter vinelandii DJ] Length = 102 Score = 36.1 bits (82), Expect = 8.4, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 V +G + A+ + +D ++D SA+ + ++G L++ ++ Sbjct: 13 VLALSGVLDYGTGPALRQQ-GRALIGTAGTDGLVLDCSAVEKSSSVGVSLLLAYLRDAKA 71 Query: 68 KIKLQGVSTHIEQLFSLIS 86 K V E + + Sbjct: 72 AGKRLQVRALPEDMCEIAQ 90 >gi|292490489|ref|YP_003525928.1| sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus halophilus Nc4] gi|291579084|gb|ADE13541.1| Sulfate transporter/antisigma-factor antagonist STAS [Nitrosococcus halophilus Nc4] Length = 121 Score = 36.1 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 FR G + E A + ++++ +DL ++ D+ G L++ +M Sbjct: 12 HFRIFGELTFNTVPEAAKKGLALFDEAV--GELHIDLQEVSRTDSAGLALLITWMR 65 >gi|256377918|ref|YP_003101578.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] gi|255922221|gb|ACU37732.1| anti-sigma-factor antagonist [Actinosynnema mirum DSM 43827] Length = 112 Score = 36.1 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 2/82 (2%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V G S + + + A ++DLS++ D+ G + + E+ Sbjct: 15 HVVTATGELDHRSASRLREAI--AGVPLGSGHHLVLDLSSLAFCDSSGLTVFIGAHERAE 72 Query: 67 GKIKLQGVSTHIEQLFSLISFT 88 + + + ++ T Sbjct: 73 AEQAAFSLVGPPPPVHKMLRLT 94 >gi|297202415|ref|ZP_06919812.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] gi|197710064|gb|EDY54098.1| anti-sigma factor antagonist [Streptomyces sviceus ATCC 29083] Length = 107 Score = 36.1 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 2/91 (2%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 G ++ + A++ + ++DLS + D G +IM Sbjct: 4 RGDHAELVVGGRLDVRSAADARTVLHSAVDDGV--GDLVLDLSELDSWDATGLGVIMGAH 61 Query: 63 EKYHGKIKLQGVSTHIEQLFSLISFTHRKKI 93 + + + Q+ L+ T +I Sbjct: 62 RRAGRCGRRLVLRDVPAQMQRLLVATRLHRI 92 >gi|295837419|ref|ZP_06824352.1| anti-sigma-B factor antagonist [Streptomyces sp. SPB74] gi|302520921|ref|ZP_07273263.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] gi|318060831|ref|ZP_07979554.1| anti-sigma-factor antagonist [Streptomyces sp. SA3_actG] gi|197696065|gb|EDY42998.1| anti-sigma-B factor antagonist [Streptomyces sp. SPB74] gi|302429816|gb|EFL01632.1| anti-sigma F factor antagonist [Streptomyces sp. SPB78] Length = 117 Score = 36.1 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N + +VD+ + +D+ G +++ ++ Sbjct: 15 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNFHLVVDMEGVDFLDSTGLGVLVGGLK 72 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 73 RVRAHEGSLRLVCNQERILKIFR 95 >gi|144897343|emb|CAM74207.1| Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Magnetospirillum gryphiswaldense MSR-1] Length = 102 Score = 36.1 bits (82), Expect = 8.5, Method: Composition-based stats. Identities = 6/83 (7%), Positives = 24/83 (28%), Gaps = 2/83 (2%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY 65 + + + + +VD++ + +D+ G +++ ++ Sbjct: 11 GPTLVLSDQLLFDHRDLFEGAIDKLLARQPT--KVVVDMAGLDYMDSAGLGMLLTLRDRA 68 Query: 66 HGKIKLQGVSTHIEQLFSLISFT 88 L + + L+ Sbjct: 69 TRAGALVCLRNPGIDVAELLRLA 91 >gi|311030731|ref|ZP_07708821.1| anti-sigma F factor antagonist [Bacillus sp. m3-13] Length = 116 Score = 36.1 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query: 6 ITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFM 62 + R AG + + I K Q I++L ++ +D+ G +I+ + Sbjct: 13 VLCVRLAGELDHHTAENLRNQATAIIEKH-QISHIILNLEQLSFMDSSGLGVILGRYKQI 71 Query: 63 EKYHGKIKLQGVSTHIEQLFSL 84 + G++ + +S +++LF + Sbjct: 72 KNNGGEMVVCSISPAVKRLFEM 93 >gi|67920337|ref|ZP_00513857.1| hypothetical protein CwatDRAFT_6580 [Crocosphaera watsonii WH 8501] gi|67857821|gb|EAM53060.1| hypothetical protein CwatDRAFT_6580 [Crocosphaera watsonii WH 8501] Length = 190 Score = 36.1 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 75/183 (40%), Gaps = 14/183 (7%) Query: 145 SSYKFKGFLLSLIRQMYYVGVSGVPVVILISFVTGAVIAQQGAFQLSQFGAEI-----FS 199 S + K +RQ+++ G+ + ++ + G +IA L Q G + + Sbjct: 6 SHDRDKTTWKKSVRQIFFGGLFTKYIAGILLVILGFLIATFSLEWLEQLGMGLDRIYLYL 65 Query: 200 IDLMSILQLREIGVLLTAVMIAGRSGSAIVAEIGSMKINEEIDAIRTMGL-DFVRILISP 258 ++S+ L +I + ++ G + IG ++ ++ L + + + S Sbjct: 66 PAIVSV-CLTQIIIRISPSPRFWSRGLIVTILIGLTLRYLFWRSLSSLNLSNPIDGIFS- 123 Query: 259 RIWALIISLPLLTILANFSAIIGASIVIWKYYDIPFAVFFSRFHSTATLANIFTGLIKAP 318 ISL +L +L FS+++ ++ A ++S+ LA IF +IK Sbjct: 124 ------ISLFVLELLVIFSSVLQLYLMYHLKDRRREADYYSQQVINKPLAKIFYAMIKGY 177 Query: 319 FMA 321 F A Sbjct: 178 FFA 180 >gi|196035154|ref|ZP_03102560.1| anti sigma b factor antagonist RsbV [Bacillus cereus W] gi|196037336|ref|ZP_03104647.1| anti sigma b factor antagonist RsbV [Bacillus cereus NVH0597-99] gi|228913672|ref|ZP_04077299.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228926135|ref|ZP_04089211.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228932397|ref|ZP_04095279.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228950126|ref|ZP_04112310.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229120606|ref|ZP_04249851.1| Anti-sigma factor antagonist [Bacillus cereus 95/8201] gi|301052633|ref|YP_003790844.1| anti-sigma B factor antagonist [Bacillus anthracis CI] gi|195992218|gb|EDX56180.1| anti sigma b factor antagonist RsbV [Bacillus cereus W] gi|196031578|gb|EDX70174.1| anti sigma b factor antagonist RsbV [Bacillus cereus NVH0597-99] gi|228662891|gb|EEL18486.1| Anti-sigma factor antagonist [Bacillus cereus 95/8201] gi|228809549|gb|EEM55986.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228827333|gb|EEM73085.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228833500|gb|EEM79061.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228845960|gb|EEM90984.1| Anti-sigma factor antagonist [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300374802|gb|ADK03706.1| anti-sigma B factor antagonist [Bacillus cereus biovar anthracis str. CI] Length = 112 Score = 36.1 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Query: 1 MSENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMY 60 + + + G + S++ + ++ ++ +VD + + +D+ G + + Sbjct: 9 LQNDVGYTVQLNGEIDAYTASDLKNKIMPIASEKEVH--IVVDFNKVDYMDSTGLGVFIA 66 Query: 61 FM---EKYHGKIKLQGVSTHIEQLFSLISFTH 89 + +K GK++ GVS +++LF + T Sbjct: 67 LLKAVKKNDGKLEFIGVSKRLKRLFDITGLTE 98 >gi|162451777|ref|YP_001614144.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] gi|161162359|emb|CAN93664.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] Length = 557 Score = 36.1 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 42/104 (40%), Gaps = 4/104 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YF 61 GI V G S +++ + +V A+ + ++ I+D++ +T +D+ A ++ Sbjct: 439 GILVVPLVGQMDSSRGAQLVESLVAAVERH-HAEFVIIDITGVTSVDSAVANHLLQATRA 497 Query: 62 MEKYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 + + G S I + + K ++ Q F + Sbjct: 498 AGLLGAECSVVGASPSIARTVIELGIEFGKLATHRDLQAGFRHA 541 >gi|325923576|ref|ZP_08185215.1| anti-anti-sigma factor [Xanthomonas gardneri ATCC 19865] gi|325545938|gb|EGD17153.1| anti-anti-sigma factor [Xanthomonas gardneri ATCC 19865] Length = 139 Score = 36.1 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 39/110 (35%), Gaps = 5/110 (4%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 ++ G S ++ + + SI + ++DL+A+ I + G I Sbjct: 12 QDTRQRVILTGRLDSHTYQDLDAALSPLLGTSIV--TLVLDLTALEYISSAGIRSIFKVR 69 Query: 63 EKY---HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKN 109 + GK+ + I ++F ++ + + + ++ + Sbjct: 70 KALATHQGKLLVTNPQPQIRKVFDMVKAVPLSDVFASTEELDAYLSAMQR 119 >gi|307824569|ref|ZP_07654794.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96] gi|307734553|gb|EFO05405.1| anti-sigma-factor antagonist [Methylobacter tundripaludum SV96] Length = 103 Score = 36.1 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 F G+ I + + + + +DLS ++ D+ G L++ +++ Sbjct: 13 HFVIDGDLTFATID---KQTLKSFSFLKAAKEITIDLSRVSNTDSAGLALMIEWIKYSRQ 69 Query: 68 KIKLQGVSTHIEQLFSLISFT 88 EQL +L + Sbjct: 70 NRTQLSFKNIPEQLLNLAKLS 90 >gi|300786347|ref|YP_003766638.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] gi|299795861|gb|ADJ46236.1| anti-anti-sigma factor [Amycolatopsis mediterranei U32] Length = 124 Score = 36.1 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 ++ G+ R AG SE+ D ++ +I + +VDL+ T D+ +++ Sbjct: 14 TDAGVVTVRCAGELDLHSASELRDALLGSI--VAGARGVVVDLTQTTFCDSTVFSVLVEA 71 Query: 62 MEKYHGK 68 + + Sbjct: 72 YREAAAR 78 >gi|242790006|ref|XP_002481478.1| periplasmic beta-glucosidase precursor, putative [Talaromyces stipitatus ATCC 10500] gi|218718066|gb|EED17486.1| periplasmic beta-glucosidase precursor, putative [Talaromyces stipitatus ATCC 10500] Length = 607 Score = 36.1 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 38/124 (30%), Gaps = 11/124 (8%) Query: 116 KKIVKFINDSCSQAHILGLVISNTGEFCASSYK-----------FKGFLLSLIRQMYYVG 164 K V+ ++ +LG + T + + + F G L+ + G Sbjct: 325 KAAVQAAKEAGLAVLMLGSLSVITADPLFNERRDGEFFTHADLGFPGRQQDLLDAILATG 384 Query: 165 VSGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRS 224 V V ++ Q L F ++ D + + E+ + +S Sbjct: 385 VPTVVILSGGQAFVLNDHTLQSNAILHSFLGGEYTTDALVEILTGEVNPSGKLTISMPQS 444 Query: 225 GSAI 228 S I Sbjct: 445 SSTI 448 >gi|330447005|ref|ZP_08310655.1| anti-anti-sigma factor family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491196|dbj|GAA05152.1| anti-anti-sigma factor family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 103 Score = 36.1 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 35/88 (39%), Gaps = 5/88 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S N + + + E+ + I + ++D++ + ID+ G I++ Sbjct: 4 SSNSVIALALHDEFDAQRAKELEKEFD--ILSQTERMELVIDMTKVQFIDSCGIGAIVFL 61 Query: 62 MEKY---HGKIKLQGVSTHIEQLFSLIS 86 ++ +++L V+ +L ++ Sbjct: 62 YKRLKSRGRRLRLLNVNGQPRELMQMLR 89 >gi|284992075|ref|YP_003410629.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] gi|284065320|gb|ADB76258.1| anti-sigma-factor antagonist [Geodermatophilus obscurus DSM 43160] Length = 116 Score = 36.1 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 2/51 (3%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGA 55 G G +A+ +++ Q +VDL+ T +D+ GA Sbjct: 12 GRPALTVRGELDIATAPHLAEAFESQLSQQPQ--CLVVDLTDTTFMDSSGA 60 >gi|197302660|ref|ZP_03167714.1| hypothetical protein RUMLAC_01390 [Ruminococcus lactaris ATCC 29176] gi|197298242|gb|EDY32788.1| hypothetical protein RUMLAC_01390 [Ruminococcus lactaris ATCC 29176] Length = 710 Score = 36.1 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 35/85 (41%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 G+ V+RF+ N ++ + D+ + K + + I+D S I ID A+ + E Sbjct: 446 EGVLVYRFSSNLFFANVNILQQDIEAELEKKKGTKAVILDASGIGSIDITAADRLAILYE 505 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFT 88 + ++ HI L + Sbjct: 506 ALKEQGIRFYITEHIADLNEQMRKL 530 >gi|302874982|ref|YP_003843615.1| anti-sigma-factor antagonist [Clostridium cellulovorans 743B] gi|307690401|ref|ZP_07632847.1| anti-sigma-factor antagonist [Clostridium cellulovorans 743B] gi|302577839|gb|ADL51851.1| anti-sigma-factor antagonist [Clostridium cellulovorans 743B] Length = 127 Score = 36.1 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---Y 60 + + G E+ + ++ + I+D + I+ +D+ G ++ Sbjct: 25 DKTLIATLVGELDHHSSEEVRAKIDDKLDNE-NYVNLIMDFNGISFMDSSGIGAVIGRYK 83 Query: 61 FMEKYHGKIKLQGVSTHIEQLFSL 84 +E+ +GK+ + V+ +I+++F L Sbjct: 84 KLERKNGKVIITNVNANIKRIFDL 107 >gi|167630653|ref|YP_001681152.1| anti-sigma factor antagonist [Heliobacterium modesticaldum Ice1] gi|167593393|gb|ABZ85141.1| anti-sigma factor antagonist [Heliobacterium modesticaldum Ice1] Length = 101 Score = 36.1 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 2 SENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYF 61 S N AG+ + +E+ + ++ +K + +D+ + ID+ G +++ Sbjct: 7 SSNNQVSVTLAGSILVTDAAELREKLLKYADK--EGVQFHIDMQRVEFIDSSGLGVLVTV 64 Query: 62 MEK---YHGKIKLQGVSTHIEQLFSLISFTH 89 +++ G + ++G+ ++++F L Sbjct: 65 LKRSRQKGGDVIIKGIHGVVKEVFELTRLNR 95 >gi|324999727|ref|ZP_08120839.1| hypothetical protein PseP1_13211 [Pseudonocardia sp. P1] Length = 126 Score = 36.1 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 27/72 (37%) Query: 5 GITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEK 64 G+ + R +G P ++ + + +VD++ +TE D E + + + Sbjct: 27 GVRLVRVSGRLDGPGVAALGRLLDAQRACGRVPAHLVVDVTGVTEFDGTAVETLGSLVGR 86 Query: 65 YHGKIKLQGVST 76 G ++ Sbjct: 87 TRGGAVHTHLAG 98 >gi|91794643|ref|YP_564294.1| Sulfate transporter/antisigma-factor antagonist STAS [Shewanella denitrificans OS217] gi|91716645|gb|ABE56571.1| Sulfate transporter/antisigma-factor antagonist STAS [Shewanella denitrificans OS217] Length = 104 Score = 36.1 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 3/99 (3%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + ++ + G E+ ++ +N S S +DLS +TEID G +L++ + Sbjct: 8 DNLSQAQIEGAMTIHNAFELKGQLMQVLNFS---HSLELDLSTVTEIDGAGLQLLIMAKQ 64 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSF 102 + + H + + + N + Sbjct: 65 QQARAHLELTLIHHSDAVVEAMELMGLVSWFNDPVIMAR 103 >gi|326203395|ref|ZP_08193260.1| anti-sigma-factor antagonist [Clostridium papyrosolvens DSM 2782] gi|325986653|gb|EGD47484.1| anti-sigma-factor antagonist [Clostridium papyrosolvens DSM 2782] Length = 105 Score = 36.1 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFM 62 + G +G +++ + + +D +T ID+ G +++ + Sbjct: 13 DGGKCQIILSGEIDIHTSQNFKNELNEVVKS--CNGDLYIDCKELTYIDSTGLGILVGAL 70 Query: 63 EKYHGK 68 ++ + Sbjct: 71 KEVRKE 76 >gi|85058187|ref|YP_453889.1| putative anti-sigma-B factor antagonist [Sodalis glossinidius str. 'morsitans'] gi|84778707|dbj|BAE73484.1| putative anti-sigma-B factor antagonist [Sodalis glossinidius str. 'morsitans'] Length = 102 Score = 36.1 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 28/80 (35%), Gaps = 5/80 (6%) Query: 8 VFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHG 67 G + + + +D+S + +D+ G L+++F Sbjct: 13 TLILHGELDRDTLLTLWQQRQPLLE-----GIRFLDVSNLRRVDSAGVALMLHFYHYQQQ 67 Query: 68 KIKLQGVSTHIEQLFSLISF 87 + ++ ++L +LI+ Sbjct: 68 RGATLALTGVTDRLRTLIAL 87 >gi|294086095|ref|YP_003552855.1| anti-anti-sigma regulatory factor [Candidatus Puniceispirillum marinum IMCC1322] gi|292665670|gb|ADE40771.1| Anti-anti-sigma regulatory factor [Candidatus Puniceispirillum marinum IMCC1322] Length = 236 Score = 36.1 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 38/118 (32%), Gaps = 6/118 (5%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 I + +G+ S++ +D+V I + +D + +T ID+ G +++ + Sbjct: 9 GDIAMLTLSGDVDLQTTSDMKNDIVDII----GINQLDIDAADVTYIDSSGIAVLLLARQ 64 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKF 121 T ++ ++ K + + G+ + Sbjct: 65 HCLQNNITINFMTASSAIYRVLQMA--KLETILPIAKVIDHAEDTGALGIGGEGVFSA 120 >gi|162454601|ref|YP_001616968.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] gi|161165183|emb|CAN96488.1| anti-anti sigma factor protein [Sorangium cellulosum 'So ce 56'] Length = 350 Score = 36.1 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 +GI G + + I + ++ AI Q++ I+D++ + +D GA + + Sbjct: 213 DGILALPLIGQIDAERAARILEVLLQAI-VDTQAEHVIIDVTGVPFMDAEGARHLRDTVR 271 Query: 64 K---YHGKIKLQGVSTHIEQLF 82 + + G+S + +L Sbjct: 272 ASSLLGAQCVIAGISPAMARLL 293 >gi|29830386|ref|NP_825020.1| anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] gi|29607497|dbj|BAC71555.1| putative anti-sigma factor antagonist [Streptomyces avermitilis MA-4680] Length = 126 Score = 36.1 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 5/73 (6%) Query: 3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM--- 59 V + AG + V A+ S ++DLS + D+ G +++ Sbjct: 12 RGDWAVLQVAGEMDLMTSPVMRQRVHDAVAD--GHRSLVLDLSEVLFCDSSGVGVLIATR 69 Query: 60 YFMEKYHGKIKLQ 72 + G+++L Sbjct: 70 RLIRSCQGRLRLI 82 >gi|114321563|ref|YP_743246.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1] gi|114227957|gb|ABI57756.1| anti-sigma-factor antagonist [Alkalilimnicola ehrlichii MLHE-1] Length = 112 Score = 36.1 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 11/99 (11%), Positives = 31/99 (31%), Gaps = 4/99 (4%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYH 66 V G + + A ++ VDL +D+ +++ E Sbjct: 14 LVLEIQGRFDFG----LHKPFRRAYRGRAGLETYRVDLRQAESMDSSALGMLLLLREHAS 69 Query: 67 GKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYN 105 G+ + E++ ++ + +K+ + + Sbjct: 70 GQGARVVLRHCQEEVDEILRTANFQKLFEIERSPAPPRP 108 >gi|302185302|ref|ZP_07261975.1| Sulfate transporter/antisigma-factor antagonist STAS [Pseudomonas syringae pv. syringae 642] Length = 101 Score = 36.1 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKYHGK 68 R G ++ A+ KS +D S + + ++G L++ FM Sbjct: 14 LRLIGVLDYRTGPQLRKQ-GAALIKSGDLADLTLDCSGVEKSSSVGLALLLAFMRDARDA 72 Query: 69 IKLQGVSTHIEQLFSLIS 86 K V + E + + Sbjct: 73 GKSMTVRSLPEDMRQIAR 90 >gi|21222799|ref|NP_628578.1| anti anti sigma factor [Streptomyces coelicolor A3(2)] gi|256786127|ref|ZP_05524558.1| anti anti sigma factor [Streptomyces lividans TK24] gi|289770022|ref|ZP_06529400.1| anti sigma factor [Streptomyces lividans TK24] gi|10178381|emb|CAC08419.1| putative anti anti sigma factor [Streptomyces coelicolor A3(2)] gi|289700221|gb|EFD67650.1| anti sigma factor [Streptomyces lividans TK24] Length = 126 Score = 36.1 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Query: 7 TVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIM---YFME 63 V + +G + V + + S ++DLS + D+ G +++ + Sbjct: 16 AVLQVSGELDLVTSPVLRQRVHDEVAE--GRHSLVLDLSDVLFCDSSGVGVLIASRRLIR 73 Query: 64 KYHGKIKLQ 72 G+++L Sbjct: 74 SCQGRLRLI 82 >gi|332140256|ref|YP_004425994.1| STAS domain protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550278|gb|AEA96996.1| STAS domain protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 102 Score = 36.1 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 1 MSENGITVFRFAGNWKSPEISEI-ADDVVMAINKSI-QSDSAIVDLSAITEIDTIGAELI 58 +++ G V G+ +S+ + + + ++ Q+ VDLS + D+ G + Sbjct: 6 VNDKGDVVVH--GHLDRDTLSKNFWESLASSERNTLVQNQRCSVDLSDVERADSAGLAWL 63 Query: 59 MYFMEKYHGKIKLQGVSTHIEQLFSLIS 86 + + + E+L L Sbjct: 64 INAVRDAKQNGVSITLHKMPEKLHKLAK 91 >gi|163847045|ref|YP_001635089.1| anti-anti-sigma factor [Chloroflexus aurantiacus J-10-fl] gi|222524868|ref|YP_002569339.1| anti-sigma-factor antagonist [Chloroflexus sp. Y-400-fl] gi|163668334|gb|ABY34700.1| anti-anti-sigma factor [Chloroflexus aurantiacus J-10-fl] gi|222448747|gb|ACM53013.1| anti-sigma-factor antagonist [Chloroflexus sp. Y-400-fl] Length = 112 Score = 36.1 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 26/86 (30%), Gaps = 2/86 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 + V G + + + + A +VDLS T +D+ ++ ++ Sbjct: 9 GNVAVLAITGRLDANTVPPVQQWLEQATGA--PGARVLVDLSETTFVDSTALATLVSALK 66 Query: 64 KYHGKIKLQGVSTHIEQLFSLISFTH 89 + + + + T Sbjct: 67 RCQQGQGEFALCGLRRPVLMIFELTR 92 >gi|139438601|ref|ZP_01772117.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC 25986] gi|133776140|gb|EBA39960.1| Hypothetical protein COLAER_01115 [Collinsella aerofaciens ATCC 25986] Length = 464 Score = 36.1 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 10/165 (6%) Query: 166 SGVPVVILISFVTGAVIAQQGAFQLSQFGAEIFSIDLMSILQLREIGVLLTAVMIAGRSG 225 ++ + ++ A Q + G + + +S L A+ G SG Sbjct: 57 QSTDIIQVALILSAIDTALQAFAPFRRIGGGLPIVMGVSFA-------FLPALQAMGASG 109 Query: 226 SAIVAEIGSMKINEEIDAIRTMGLDFVRILISPRIWALIISLPLLTILANFSAIIGASIV 285 + A +G + + + + ++ L P + +I +++ + + Sbjct: 110 FSFGALLGGEIVGGAVAVLFGLAYSKIKWLFPPVVTGTVIFSIGVSLYPTAVKYMAGGMG 169 Query: 286 IWKYY-DIPFAVFFSRFHSTATLANIFTGLIK--APFMACAIGIV 327 + + V F LAN G +K + F +G++ Sbjct: 170 TPLWGTPQAWCVALITFAVVFALANFGKGTLKLGSVFFGMIVGMI 214 >gi|21221968|ref|NP_627747.1| anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|256786945|ref|ZP_05525376.1| anti-sigma factor antagonist [Streptomyces lividans TK24] gi|289770839|ref|ZP_06530217.1| anti-sigma-B factor antagonist [Streptomyces lividans TK24] gi|7227941|sp|Q9WVX8|RSBV_STRCO RecName: Full=Anti-sigma-B factor antagonist; AltName: Full=Anti-anti-sigma-B factor gi|4835880|gb|AAD30281.1|AF134889_1 putative anti-anti-sigma factor BldG [Streptomyces coelicolor] gi|4539567|emb|CAB38486.1| putative anti-sigma factor antagonist [Streptomyces coelicolor A3(2)] gi|289701038|gb|EFD68467.1| anti-sigma-B factor antagonist [Streptomyces lividans TK24] Length = 113 Score = 36.1 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 >gi|318079149|ref|ZP_07986481.1| anti-sigma-factor antagonist [Streptomyces sp. SA3_actF] Length = 108 Score = 36.1 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N + +VD+ + +D+ G +++ ++ Sbjct: 6 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GNFHLVVDMEGVDFLDSTGLGVLVGGLK 63 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 64 RVRAHEGSLRLVCNQERILKIFR 86 >gi|297530171|ref|YP_003671446.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3] gi|297253423|gb|ADI26869.1| anti-sigma-factor antagonist [Geobacillus sp. C56-T3] Length = 141 Score = 36.1 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 36/119 (30%), Gaps = 4/119 (3%) Query: 9 FRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFMEKY--- 65 + G + A+ ++ +VD+S + +D+ G L++ F ++ Sbjct: 21 IKLTGRLAYDTQLAAEQKLATAVAA-VKRCLVVVDVSGLRFLDSTGLALLVRFFKQIVSE 79 Query: 66 HGKIKLQGVSTHIEQLFSLISFTHRKKIKNQKPQRSFFYNSFKNLHYHIGKKIVKFIND 124 + + + L++ R Q+ + + + + Sbjct: 80 SRAMAIVVRDNAAIEKILLMAKLDRLLPIVGDEQQLLSLAPPSSFDHISQEALYSAWRQ 138 >gi|290958526|ref|YP_003489708.1| anti-anti-sigma factor BldG [Streptomyces scabiei 87.22] gi|329939418|ref|ZP_08288754.1| anti-anti-sigma factor BldG [Streptomyces griseoaurantiacus M045] gi|260648052|emb|CBG71160.1| anti-anti-sigma factor BldG [Streptomyces scabiei 87.22] gi|329301647|gb|EGG45541.1| anti-anti-sigma factor BldG [Streptomyces griseoaurantiacus M045] Length = 113 Score = 36.1 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Query: 4 NGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME 63 TV G ++ + +V +N S +VD+ + +D+ G +++ ++ Sbjct: 11 GDRTVVEVGGEIDVYTAPKLREQLVELVND--GSFHLVVDMEGVDFLDSTGLGVLVGGLK 68 Query: 64 KYHGKIKLQGVSTHIEQLFSLIS 86 + + + E++ + Sbjct: 69 RVRAHEGSLRLVCNQERILKIFR 91 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.316 0.142 0.377 Lambda K H 0.267 0.0433 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,222,945,451 Number of Sequences: 13984884 Number of extensions: 163593599 Number of successful extensions: 915358 Number of sequences better than 10.0: 10000 Number of HSP's better than 10.0 without gapping: 2403 Number of HSP's successfully gapped in prelim test: 7748 Number of HSP's that attempted gapping in prelim test: 906604 Number of HSP's gapped (non-prelim): 13283 length of query: 373 length of database: 4,792,584,752 effective HSP length: 140 effective length of query: 233 effective length of database: 2,834,700,992 effective search space: 660485331136 effective search space used: 660485331136 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 82 (36.1 bits)