RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR03415
>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382
Score = 115 bits (290), Expect = 9e-27
Identities = 75/233 (32%), Positives = 126/233 (54%), Gaps = 22/233 (9%)
Query: 30 NNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVL--GEHLNLAK---GKQ 84
N +LDI GEI ++G SG+GKS L+R + GL P G V V +++A
Sbjct: 41 ANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATL 100
Query: 85 NFAFSAKLGVLFQHGALFSSMTVQENIS-------MPIKEHLNLPADLIEHIVHTKIAIV 137
+ ++ ++FQ AL +TV+EN++ MP E V ++ +V
Sbjct: 101 RRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKR--------VDEQLELV 152
Query: 138 GLPPETANLMPFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDKLLIKLR 197
GL + A+ P +LSGGM +RV LARA A+D D+L +DEP S LDP+ + L++L+
Sbjct: 153 GLA-QWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQ 211
Query: 198 HSLGLSVYMITHDLNNLISTCNRVAVIQKKGIMKEGTISDIV-DSNDPWIRSY 249
L ++ ++HDL+ + NR+A+++ I++ GT +IV + + ++ +
Sbjct: 212 AKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVADF 264