RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score = 90.9 bits (226), Expect = 3e-19
 Identities = 80/242 (33%), Positives = 114/242 (47%), Gaps = 37/242 (15%)

Query: 11  EKILSVRNLTI--ELNNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSG 68
           E  LSV N+TI      +  L  I+  +  GE L +IG SG+GKS L R I+G+ P  SG
Sbjct: 314 EGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSG 373

Query: 69  EVKVLGEHLNLAKGKQNFAFSAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEH 128
            V++ G  L   +  +   F   +G L Q   LF   TV ENI+          AD  + 
Sbjct: 374 SVRLDGADLK--QWDRET-FGKHIGYLPQDVELFPG-TVAENIA-----RFGENADPEKI 424

Query: 129 IVHTKIA-----IVGLP--------PETANLMPFQLSGGMIKRVSLARALAIDPDLLFLD 175
           I   K+A     I+ LP        P  A      LSGG  +R++LARAL  DP L+ LD
Sbjct: 425 IEAAKLAGVHELILRLPDGYDTVIGPGGAT-----LSGGQRQRIALARALYGDPKLVVLD 479

Query: 176 EPTSGLDPIAAEEFDKLLIKLRHSLGLSVYMITHDLNNLISTCNRVAVIQKKGIMKEGTI 235
           EP S LD    +     +  L+   G++V +ITH  + L         + K  ++++G I
Sbjct: 480 EPNSNLDEEGEQALANAIKALKAR-GITVVVITHRPSLL-------GCVDKILVLQDGRI 531

Query: 236 SD 237
           + 
Sbjct: 532 AR 533