RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR01846
>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694
Score = 94.8 bits (236), Expect = 2e-20
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 26/218 (11%)
Query: 28 ILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVLGEHLNLAKGKQNFA 87
+L+N+NLDI GE +G++G SG+GKS L + + L G+V V G L +A
Sbjct: 472 VLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPA---W 528
Query: 88 FSAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEHIVH-TKIA-----IVGLPP 141
++GV+ Q LFS ++++NI+ L P EH++H K+A I LP
Sbjct: 529 LRRQMGVVLQENVLFSR-SIRDNIA------LCNPGAPFEHVIHAAKLAGAHDFISELPQ 581
Query: 142 ETANLMPFQ---LSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDKLLIKLRH 198
+ + LSGG +R+++ARAL +P +L DE TS LD E + L+++
Sbjct: 582 GYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALD----YESEALIMRNMR 637
Query: 199 SL--GLSVYMITHDLNNLISTCNRVAVIQKKGIMKEGT 234
+ G +V +I H L+ + C+R+ V++K I + G
Sbjct: 638 EICRGRTVIIIAHRLST-VRACDRIIVLEKGQIAESGR 674