RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR01846

>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694
 Score = 94.8 bits (236), Expect = 2e-20
 Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 26/218 (11%)

Query: 28  ILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVLGEHLNLAKGKQNFA 87
           +L+N+NLDI  GE +G++G SG+GKS L + +  L     G+V V G  L +A       
Sbjct: 472 VLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPA---W 528

Query: 88  FSAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEHIVH-TKIA-----IVGLPP 141
              ++GV+ Q   LFS  ++++NI+      L  P    EH++H  K+A     I  LP 
Sbjct: 529 LRRQMGVVLQENVLFSR-SIRDNIA------LCNPGAPFEHVIHAAKLAGAHDFISELPQ 581

Query: 142 ETANLMPFQ---LSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDKLLIKLRH 198
                +  +   LSGG  +R+++ARAL  +P +L  DE TS LD     E + L+++   
Sbjct: 582 GYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALD----YESEALIMRNMR 637

Query: 199 SL--GLSVYMITHDLNNLISTCNRVAVIQKKGIMKEGT 234
            +  G +V +I H L+  +  C+R+ V++K  I + G 
Sbjct: 638 EICRGRTVIIIAHRLST-VRACDRIIVLEKGQIAESGR 674