RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR02857

>gnl|CDD|163042 TIGR02857, CydD, thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD. Length = 529

 Score = 93.1 bits (232), Expect = 7e-20
 Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 18/219 (8%)

Query: 14  LSVRNLTIELNNR--IILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVK 71
           L    L++    R    L  ++  +  GE + ++G SG GKS L+  +LG +    G + 
Sbjct: 321 LEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIA 380

Query: 72  VLGEHLNLAKGKQNFAFSAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEHIVH 131
           V G  L  A       +  ++  + QH  LF+  T+ ENI +   +        I   + 
Sbjct: 381 VNGVPLADADADS---WRDQIAWVPQHPFLFAG-TIAENIRLARPD---ASDAEIRRALE 433

Query: 132 TKIA---IVGLPPETANLM---PFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIA 185
                  +  LP     L+      LSGG  +R++LARA   D  LL LDEPT+ LD   
Sbjct: 434 RAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAET 493

Query: 186 AEEFDKLLIKLRHSLGLSVYMITHDLNNLISTCNRVAVI 224
                + L  L    G +V ++TH L  L    +R+ V+
Sbjct: 494 EALVTEALRALAQ--GRTVLLVTHRL-ALAERADRIVVL 529