RPSBLAST alignment for GI: 254780139 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 83.7 bits (207), Expect = 5e-17
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 3 LNNIPSQEEKILSVRNLTIELNNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGL 62
S K L + E+ L +++ ++ RGE +G+IG +G GKS L+R + G+
Sbjct: 12 TYKGGSSSLKKLGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGI 71
Query: 63 IPRVSGEVKVLGEHLNLAKGKQNFAFSAKLGVLFQHGALFSSMTVQENISMPIKEHLNLP 122
P SG V V G S+ LG+ G +T +ENI + L L
Sbjct: 72 YPPDSGTVTVRGR------------VSSLLGL---GGGFNPELTGRENIYL-NGRLLGLS 115
Query: 123 ADLIEHIVHTKIAIVGLPPETANLMPFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLD 182
I+ + I L + +L S GM R++ A A A++PD+L +DE + D
Sbjct: 116 RKEIDEKIDEIIEFSEL-GDFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGD 174
Query: 183 PIAAEEF-DKLLIKLRHSL--GLSVYMITHDLNNLISTCNRVAVIQK 226
F +K +LR L G +V +++HD +++ C+R V++K
Sbjct: 175 ----AAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEK 217