RPSBLAST alignment for GI: 254780139 and conserved domain: cd03223
>gnl|CDD|72982 cd03223, ABCD_peroxisomal_ALDP, Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asymptomatic).. Length = 166
Score = 62.1 bits (151), Expect = 1e-10
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 56/199 (28%)
Query: 14 LSVRNLTIEL-NNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKV 72
+ + NL++ + R++L +++ +I G+ L + G SGTGKS L R + GL P SG + +
Sbjct: 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGM 60
Query: 73 LGEHLNLAKGKQNFAFSAKLGVLF--QHGALFSSMTVQENISMPIKEHLNLPADLIEHIV 130
+LF Q T++E + P +
Sbjct: 61 PEGE----------------DLLFLPQR-PYLPLGTLREQLIYPWDD------------- 90
Query: 131 HTKIAIVGLPPETANLMPFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFD 190
LSGG +R++ AR L P +FLDE TS LD EE +
Sbjct: 91 -------------------VLSGGEQQRLAFARLLLHKPKFVFLDEATSALD----EESE 127
Query: 191 KLLIKLRHSLGLSVYMITH 209
L +L LG++V + H
Sbjct: 128 DRLYQLLKELGITVISVGH 146