RPSBLAST alignment for GI: 254780139 and conserved domain: cd03224
>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
Score = 117 bits (295), Expect = 3e-27
Identities = 58/229 (25%), Positives = 112/229 (48%), Gaps = 10/229 (4%)
Query: 14 LSVRNLTIELNNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVL 73
L V NL IL ++L + GEI+ ++G +G GK+ L++ I+GL+P SG ++
Sbjct: 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFD 60
Query: 74 GEHLNLAKGKQNFAFSAKLGVLF--QHGALFSSMTVQENISMPIKEHLNLPADLIEHIVH 131
G + + A+ G+ + + +F +TV+EN+ + + +
Sbjct: 61 GRDITGLPPHE----RARAGIGYVPEGRRIFPELTVEENLLLGAY---ARRRAKRKARLE 113
Query: 132 TKIAIVGLPPETANLMPFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDK 191
+ E + LSGG + +++ARAL P LL LDEP+ GL P EE +
Sbjct: 114 RVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFE 173
Query: 192 LLIKLRHSLGLSVYMITHDLNNLISTCNRVAVIQKKGIMKEGTISDIVD 240
+ +LR G+++ ++ + + +R V+++ ++ EGT ++++
Sbjct: 174 AIRELR-DEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221