RPSBLAST alignment for GI: 254780139 and conserved domain: cd03252

>gnl|CDD|73011 cd03252, ABCC_Hemolysin, The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.. Length = 237
 Score = 94.2 bits (234), Expect = 3e-20
 Identities = 70/230 (30%), Positives = 122/230 (53%), Gaps = 26/230 (11%)

Query: 24  NNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVLGEHLNLAKGK 83
           +  +IL+NI+L I  GE++G++G SG+GKS L + I       +G V V G  L LA   
Sbjct: 13  DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPA 72

Query: 84  QNFAFSAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEHIVH-TKIA-----IV 137
                  ++GV+ Q   LF+  ++++NI+      L  P   +E ++   K+A     I 
Sbjct: 73  ---WLRRQVGVVLQENVLFNR-SIRDNIA------LADPGMSMERVIEAAKLAGAHDFIS 122

Query: 138 GLPPETANLMPFQ---LSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDKLLI 194
            LP     ++  Q   LSGG  +R+++ARAL  +P +L  DE TS LD     E +  ++
Sbjct: 123 ELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALD----YESEHAIM 178

Query: 195 KLRHSL--GLSVYMITHDLNNLISTCNRVAVIQKKGIMKEGTISDIVDSN 242
           +  H +  G +V +I H L+  +   +R+ V++K  I+++G+  +++  N
Sbjct: 179 RNMHDICAGRTVIIIAHRLST-VKNADRIIVMEKGRIVEQGSHDELLAEN 227