HHsearch alignment for GI: 254780140 and conserved domain: COG3008
>COG3008 PqiB Paraquat-inducible protein B [General function prediction only].
Probab=98.65 E-value=2e-08 Score=76.80 Aligned_cols=64 Identities=16% Similarity=0.171 Sum_probs=49.0
Q ss_pred EEEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCEEEEEE--EEECCCCCCCCCCEEEEEEC
Q ss_conf 8999997187567668980789007433798888648886079999--99748972468846999742
Q gi|254780140|r 39 AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK--ALIRPDTPLYPSTTATIRTQ 104 (452)
Q Consensus 39 ~~~~~~f~~~v~GL~~gspV~~~Gv~VG~V~~I~l~~~~~~~v~v~--~~i~~~~~i~~~~~~~i~~~ 104 (452)
T Consensus 162 L~i~L~-a~dlGsL~~GspVyfr~i~VGqV~sy~~d~d~~~-V~i~vfI~~py~~lV~~~sRFWn~SG 227 (553)
T COG3008 162 LRIHLD-AKDLGSLNVGSPVYFRKIPVGQVESYQFDPDKQG-VTIQVFIEAPYDRLVKKDSRFWNVSG 227 (553)
T ss_pred CEEEEE-CCCCCCCCCCCEEEEECEEEEEEEEEEECCCCCE-EEEEEEECCHHHHHHCCCCEEEECCC
T ss_conf 089984-6755776789804880104301788877677884-79999955737666235754652214