RPSBLAST alignment for GI: 254780140 and conserved domain: TIGR00996
>gnl|CDD|162151 TIGR00996, Mtu_fam_mce, virulence factor Mce family protein. Members of this paralogous family are found as six tandem homologous proteins in the same orientation per cassette, in four separate cassettes in Mycobacterium tuberculosis. The six members of each cassette represent six subfamilies. One subfamily includes the protein mce (mycobacterial cell entry), a virulence protein required for invasion of non-phagocytic cells. Length = 291
Score = 48.8 bits (117), Expect = 3e-06
Identities = 52/356 (14%), Positives = 106/356 (29%), Gaps = 83/356 (23%)
Query: 8 TSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+V L V +L F + + Y A GL S VR G+PVG
Sbjct: 6 AAVVLAAVVVLGVVFLRLPFRGFGPGTY-TVYAY-----FTDAGGLYPGSKVRVRGVPVG 59
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + L N + + + + TA IR+ L G Y+EL+ +
Sbjct: 60 KVTAISLP---GNGARVTFSLDRGVTIPANATAAIRSTTLLGSRYVELTPPKGPGGPPLP 116
Query: 127 ----IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
I R T+ P I+ + + +
Sbjct: 117 PGGVIPLAR------TSVPPEIDDLLGSLTRLLNGLD--------------------PEK 150
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID--LQKVN 240
+ I LA P + +L+ L ++ A++ +
Sbjct: 151 LNAILNALAEA---------LAGQGPQ----------LRNLLDGLAQLTAALNARDGDIG 191
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++N+ + SDQ+ + ++ T + +D L+ S
Sbjct: 192 ALIDNLNRVLDVLADRSDQLDRLLDNLATLTAQLADRDDALDDALAA---------LSGA 242
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ D + + R + + + + + L D + +L+ +
Sbjct: 243 SAQVRDL-------------LAENRPNLPQALANLAPVLTLLVDYHPELEQLLHLL 285