HHsearch alignment for GI: 254780141 and conserved domain: COG3009

>COG3009 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.96  E-value=8.8e-28  Score=175.86  Aligned_cols=181  Identities=15%  Similarity=0.223  Sum_probs=154.8

Q ss_pred             HHHHHHHHHHCCCCCCCCCEEEECCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHH
Q ss_conf             9999999863048899986079707888766-666666208981530120006863789946976998146601256899
Q gi|254780141|r   18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYD-ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR   96 (208)
Q Consensus        18 l~~~~~~~l~~c~~~~~p~~~Y~L~~~~~~~-~~~~~~~~i~v~~~~~~~~l~~~~Iv~~~~~~~~~~~~~~rW~~~p~~   96 (208)
T Consensus         5 l~~~aal~L~~Cas~~p~~~~yqLp~~~~~~~~a~~g~r~l~v~~V~ladyL~~~giVyrtsd~q~~~a~nn~WA~pLd~   84 (190)
T COG3009           5 LMIIAALLLAGCASGEPSKQYYQLPVAASAPVPASQGGRLLWVEPVRLADYLKRNGIVYRTSDVQLVIANNNRWASPLDQ   84 (190)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCEEEECCCHHEEEHHHCCCCCCHHH
T ss_conf             99999999875379998832897446556776502365438985100554424786599707740021310310140308


Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCC-CCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCC
Q ss_conf             99999999997316940650376777-88359999999999635874799999999994578827789999999952779
Q gi|254780141|r   97 MIQLKLIANFENNGKISTVVKPNQGI-YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD  175 (208)
Q Consensus        97 ~l~~~L~~~L~~~~~~~~v~~~~~~~-~~~~~L~~~I~~f~~~~~~~~a~i~~~~~l~~~~~~~~~~~~~f~~~~~~~~~  175 (208)
T Consensus        85 qL~q~L~~~ls~~l~~~~va~~p~~s~q~~~~l~vtv~rF~gry~g-~a~i~g~W~L~~-~~G~~~~~r~F~~e~eq~~~  162 (190)
T COG3009          85 QLRQALSANLSRLLSGWVVAPAPASSGQDLYKLNVTVQRFDGRYTG-KAVISGEWRLLH-DKGQPLINRPFHLELEQQGD  162 (190)
T ss_pred             HHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCC-CEEEEEEEEEEC-CCCCCCCCCCEEEEECCCCC
T ss_conf             9999999988765466466136688886307999999621573468-548999999745-66672115740366423478


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9889999999999999999999999
Q gi|254780141|r  176 NKLHFIQSLNRAFSRISSEIIDWTL  200 (208)
Q Consensus       176 ~~~~~v~Al~~Al~~l~~~ia~w~~  200 (208)
T Consensus       163 gyda~V~als~~~~Q~a~qia~~vk  187 (190)
T COG3009         163 GYDAMVRALSGGLKQLAAQIAEQVK  187 (190)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             7889999999999999999998620