HHsearch alignment for GI: 254780141 and conserved domain: COG4380
>COG4380 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=92.89 E-value=0.62 Score=24.23 Aligned_cols=169 Identities=12% Similarity=0.213 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCC--CCCCCCCCEEEEEECCCEEEEECCCCCCCC
Q ss_conf 999999999863048899986079707888766666666208981530--120006863789946976998146601256
Q gi|254780141|r 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPI--TEKILNSEDIIVRSSPIEIQYLIGSQWSDK 93 (208)
Q Consensus 16 ~~l~~~~~~~l~~c~~~~~p~~~Y~L~~~~~~~~~~~~~~~i~v~~~~--~~~~l~~~~Iv~~~~~~~~~~~~~~rW~~~ 93 (208)
T Consensus 4 l~~~~~~vl~ls~c~~~~a~~dyt~fk~------s--kp~silv~ppln~spdv~at~g~Lsqvt-~PLaEAGY--YV~- 71 (216)
T COG4380 4 LILGLAAVLALSACQVQKAPFDYTSFKE------S--KPASILVVPPLNESPDVNATWGVLSQVT-APLAEAGY--YVF- 71 (216)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHH------C--CCCEEEEECCCCCCCCCCCHHHHHHHHC-CHHHHCCE--EEE-
T ss_conf 8999999999865357767665344430------5--9843898478788987441134455521-00332833--787-
Q ss_pred HHHHHHHHHHH-HHHHHCCCEEEECCCCC--CCCCEEEEEEEEEEEEEC---CCCEEEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf 89999999999-99731694065037677--788359999999999635---8747999999999945788277899999
Q gi|254780141|r 94 LPRMIQLKLIA-NFENNGKISTVVKPNQG--IYADYQIISAIRSFEINI---DRHCAIITMSLKIINAHDNSLVGQKVFH 167 (208)
Q Consensus 94 p~~~l~~~L~~-~L~~~~~~~~v~~~~~~--~~~~~~L~~~I~~f~~~~---~~~~a~i~~~~~l~~~~~~~~~~~~~f~ 167 (208)
T Consensus 72 PvAvveETFkQNGlT~AgDih~v~paKL~qIfGaDA~LYiTvt~YGT~Y~ii~S-~T~V~A~AkLVDlr~G~~LWsGsas 150 (216)
T COG4380 72 PVAVVEETFKQNGLTNAGDIHAVRPAKLHQIFGADAVLYITVTEYGTSYQIIDS-VTTVSAKAKLVDLRNGKELWSGSAS 150 (216)
T ss_pred EEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCEEEEEEE-EEEEEECCEEEECCCCCEEECCCCC
T ss_conf 516657788874887533405579899998747664899998644616899741-0488513358872578466524543
Q ss_pred EEEEC-CCCCHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 99952-779988999999-9999999999999
Q gi|254780141|r 168 VEEKL-EKDNKLHFIQSL-NRAFSRISSEIID 197 (208)
Q Consensus 168 ~~~~~-~~~~~~~~v~Al-~~Al~~l~~~ia~ 197 (208)
T Consensus 151 ASs~E~gN~s~gGliG~LvsAaV~QI~Ns~~D 182 (216)
T COG4380 151 ASSREGGNNSNGGLLGALVSAAVNQIANSLTD 182 (216)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 12002577876407999999999999756552