HHsearch alignment for GI: 254780141 and conserved domain: PRK02889

>PRK02889 tolB translocation protein TolB; Provisional.
Probab=93.31  E-value=0.53  Score=24.59  Aligned_cols=88  Identities=16%  Similarity=0.206  Sum_probs=51.3

Q ss_pred             CHHHHHHHHHHHHHHHHCCCEEEECCCCC--------------CCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCC
Q ss_conf             68999999999999731694065037677--------------7883599999999996358747999999999945788
Q gi|254780141|r   93 KLPRMIQLKLIANFENNGKISTVVKPNQG--------------IYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN  158 (208)
Q Consensus        93 ~p~~~l~~~L~~~L~~~~~~~~v~~~~~~--------------~~~~~~L~~~I~~f~~~~~~~~a~i~~~~~l~~~~~~  158 (208)
T Consensus        52 ~~~~~i~~II~~DL~~SG~F~~l~~~~~~~~~~~~i~f~~W~~lgad~lv~G~v~~~~---~g-~--~~v~~~L~Dv~~~  125 (430)
T PRK02889         52 GLPQQVTSIVRADLARSGKFSNVDAGGAPVPETASVDLGAWKAKGADAFVAGSVNREP---NG-Q--YEVRFRLYDTVKQ  125 (430)
T ss_pred             CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECC---CC-C--EEEEEEEEECCCC
T ss_conf             7506799999988872888400584347899878868689886089899999999778---98-4--8999999974666


Q ss_pred             CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             277899999999527799889999999999999999999
Q gi|254780141|r  159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID  197 (208)
Q Consensus       159 ~~~~~~~f~~~~~~~~~~~~~~v~Al~~Al~~l~~~ia~  197 (208)
T Consensus       126 ~~l~g~~~~~~-----------~~~~R~~aH~iaD~Iy~  153 (430)
T PRK02889        126 QSLGGLSLTVT-----------EDQLRATAHKIADYIYE  153 (430)
T ss_pred             CEEEEEEEEEC-----------HHHHHHHHHHHHHHHHH
T ss_conf             18743389958-----------89989999999999999