HHsearch alignment for GI: 254780141 and conserved domain: PRK02889
>PRK02889 tolB translocation protein TolB; Provisional.
Probab=93.31 E-value=0.53 Score=24.59 Aligned_cols=88 Identities=16% Similarity=0.206 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEECCCCC--------------CCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCC
Q ss_conf 68999999999999731694065037677--------------7883599999999996358747999999999945788
Q gi|254780141|r 93 KLPRMIQLKLIANFENNGKISTVVKPNQG--------------IYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN 158 (208)
Q Consensus 93 ~p~~~l~~~L~~~L~~~~~~~~v~~~~~~--------------~~~~~~L~~~I~~f~~~~~~~~a~i~~~~~l~~~~~~ 158 (208)
T Consensus 52 ~~~~~i~~II~~DL~~SG~F~~l~~~~~~~~~~~~i~f~~W~~lgad~lv~G~v~~~~---~g-~--~~v~~~L~Dv~~~ 125 (430)
T PRK02889 52 GLPQQVTSIVRADLARSGKFSNVDAGGAPVPETASVDLGAWKAKGADAFVAGSVNREP---NG-Q--YEVRFRLYDTVKQ 125 (430)
T ss_pred CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECC---CC-C--EEEEEEEEECCCC
T ss_conf 7506799999988872888400584347899878868689886089899999999778---98-4--8999999974666
Q ss_pred CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 277899999999527799889999999999999999999
Q gi|254780141|r 159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197 (208)
Q Consensus 159 ~~~~~~~f~~~~~~~~~~~~~~v~Al~~Al~~l~~~ia~ 197 (208)
T Consensus 126 ~~l~g~~~~~~-----------~~~~R~~aH~iaD~Iy~ 153 (430)
T PRK02889 126 QSLGGLSLTVT-----------EDQLRATAHKIADYIYE 153 (430)
T ss_pred CEEEEEEEEEC-----------HHHHHHHHHHHHHHHHH
T ss_conf 18743389958-----------89989999999999999