HHsearch alignment for GI: 254780142 and conserved domain: PRK02173
>PRK02173 DNA-directed RNA polymerase subunit beta'; Provisional.
Probab=100.00 E-value=0 Score=2930.98 Aligned_cols=1169 Identities=41% Similarity=0.703 Sum_probs=1034.3
Q ss_pred CCCCCEEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC------
Q ss_conf 786405368984588678850144897175542545687568873362136856677215-6641563448835------
Q gi|254780142|r 13 TDDRGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECI-CGKYKRMKYKGII------ 85 (1398)
Q Consensus 13 ~~~~~i~~i~f~l~spe~I~~~S~~ev~~~et~n~~~~kP~~~Gl~d~ri~g~~~d~~c~-Cg~~~~~~~~g~~------ 85 (1398)
T Consensus 8 ~~~~~f~~i~i~laspe~Ir~wS~GeV~kpeTinyrt~KPe~~GLfce~Ifgp~kd~eC~~Cgk~~~~~~~~~~c~~~~~ 87 (1438)
T PRK02173 8 ISENKIQKISLALATPEDVLEWSRGEVTKPETINYKTYKPERGGLFDELIFGPLTDYKCPICGRKYKKSNENQLCIATKE 87 (1438)
T ss_pred CCHHCCCEEEEEECCHHHHHHHHCEEECCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCHHCCCCCCEEECCEECCCCCC
T ss_conf 37302464899831889999872840289866366889988887622032198635621100771124116855356761
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCH---------HHHHHHHHHCCEEEECCCC-CCH
Q ss_conf 675788530477578767720027762201301225789999809996---------5630133211123217886-510
Q gi|254780142|r 86 CEKCGVEVTLSSVRRDRMAHIDLASPVAHPWFLKSLPSRISTLLGMSL---------RDVERVLYFESYVVVDPGL-SSL 155 (1398)
Q Consensus 86 C~~Cg~~~~~~~~r~ghfGhIeLa~PV~Hi~f~k~~~~~i~~~l~~~~---------~~~~~v~y~~~~~~~~~~~-~~~ 155 (1398)
T Consensus 88 C~~~gvev~~~~vrr~rmGHIeLa~PV~Hiwf~K~~ps~i~~lL~l~~~~~~~~~s~k~le~viy~~~~iv~~~~~~~~~ 167 (1438)
T PRK02173 88 CKIEKPEILPKISRRSRMGHIALNAPVVHFWFFKIDHSIISKLLGLKVAESNKTVTKTDLENLIYYKSHIVLETGGLKSL 167 (1438)
T ss_pred CCCCCEEECCCEECCCCCCCCEECCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf 78888694825450223577002686041003379603999982874434556666878787531201698558875531
Q ss_pred HHHCCCCH----------------------HHHHHHH---------------HHCCCC------------CEEECCCHHH
Q ss_conf 43223699----------------------9998867---------------635855------------5061155267
Q gi|254780142|r 156 EKYQILTE----------------------EEYVEAV---------------SQFGQD------------QFIAMMGADA 186 (1398)
Q Consensus 156 ~~~~~~~~----------------------~~~~~~~---------------~~~~~~------------~~~~~~g~~~ 186 (1398)
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gaea 247 (1438)
T PRK02173 168 PKNKIIDISEAALIYKDALEEIIEFYPPGSEEYEAIAETISELADVASSKIGQDYGIDFYELNEIIEEYSSAKIATGSKA 247 (1438)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 01011221244556677889988751233488888888765444443322233305305666677776423442103999
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHC-----------CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEE
Q ss_conf 78887726748899999987310-----------3220347886447788866663489851128630450762235138
Q gi|254780142|r 187 IYELLIALDLQNLALTLRDQLSK-----------SSSIFRRKKIIKRLKIVDSFITSGNNPGWMIIRKLPVLPPDLRPLV 255 (1398)
Q Consensus 187 i~~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~f~~~~~~Pewmil~~lpV~P~~~RP~v 255 (1398)
T Consensus 248 i~~lL~~~dl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~krl~~v~~f~~s~~rPeWMil~vlPV~Pp~lRP~v 327 (1438)
T PRK02173 248 IEYLLKNIDLRAEKEAIEAEIKGINKQIYKNKTSSSKNQKRDKLYKRLQVINAFINSGQDPKSMLIYNLPVIPADLRPLV 327 (1438)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEE
T ss_conf 99998566879999999999987555432211000135678889999999999986499960588613688999887208
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHC
Q ss_conf 846973131003789999999869999998739835677769999999888874277678-7724787650678998610
Q gi|254780142|r 256 ALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIIRNEKRMLQESVDALFDNGRHK-RVVTGANRRPLKSLSDMLK 334 (1398)
Q Consensus 256 ~~~~g~~~~dDlt~~~~~Ii~~N~~Lk~~~~~~ap~~i~~~~~~lLQ~~v~~~~dn~~~~-~~~~~~~~rp~ks~~~rlk 334 (1398)
T Consensus 328 ~LdgGrfatsDLn~lyrriI~rNnrLk~l~~~~aP~~Ii~nekrmLQeaVdal~DN~~~g~~~v~~~~~RPLKSLs~rLK 407 (1438)
T PRK02173 328 QLDGGRHSTSDINELYRRIIIRNNRLKKWKEADAPVLIIQNELRMIQEAVDALIDNQRKSPNPVTSKDNRPLKSISDALT 407 (1438)
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHC
T ss_conf 96898752665388899999987999999874998889987999999999999727877888773999895543788727
Q ss_pred CCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEHHH
Q ss_conf 23782000346510045774034125543546200348987761289999999987986663000100122488250132
Q gi|254780142|r 335 GKQGRFRTNLLGKRVDYSGRSVIVAGPELQLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVL 414 (1398)
Q Consensus 335 gK~GrfR~nl~GKRVdfs~RsVI~pdP~l~~~evgvP~~~A~~L~~P~~~~~L~~~g~~~~i~~~k~~i~~~~~~v~~v~ 414 (1398)
T Consensus 408 GKeGRFR~NLlGKRVDfSgRSVIs~dPnL~l~evGvPk~mA~eLt~P~ii~~L~~~~~~~~ik~akk~ie~~~~~vw~~l 487 (1438)
T PRK02173 408 GKKGRFRQNLLGKRVDYSGRSVIVVGPKLKMHQAGIPREMAAKLFEPWIIKELIQEEKVGSIKMAKKMIEELNPIIWPHV 487 (1438)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHCCCCCCHHHHHHHHHHCCCCCHHHH
T ss_conf 88763257788666476998715789998530035879999871977456066564774430345556662597112878
Q ss_pred HHHHCCCEEEECCCCCCEECCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 66656978997576310111401235899449547973122545467877545699746899999999998767505423
Q gi|254780142|r 415 AEVVHQHVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQLEARVLMLSTNNLLH 494 (1398)
Q Consensus 415 rhl~~gd~Vl~NRqPsLHr~Simah~~~v~~~~t~rln~~vc~pyNADFDGDEMnlHvPqs~eAraEa~~Lm~~~~niis 494 (1398)
T Consensus 488 e~vi~gd~VLfNRqPTLHRmSImah~~kl~~gkTfRLhp~VC~pYNADFDGDEMNvHVPQS~EArAEA~~LM~v~~NIls 567 (1438)
T PRK02173 488 AKVIQNKPVLLNRAPTLHRLSIQAFEPVLIRGKAIKLHPLVTTAFNADFDGDQMAVHVPISPEAVREAQELMFANKNILG 567 (1438)
T ss_pred HHHHCCCEEEECCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 98746980575277410114333564476417358842001565568888762675167999999999998623047214
Q ss_pred CCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCC--CCCCEEECCCC
Q ss_conf 7887820440258999999873367887446814179999999998889867852365204645667--61424521797
Q gi|254780142|r 495 PASGAPVTVPSQDMVLGLCYLSTVHEGDPGEGMLFADMGEVYHALENKIVTLHSKIRGRYKSVDKDG--NSISKIYDTTP 572 (1398)
Q Consensus 495 P~~g~Pi~~~~QD~i~G~y~lT~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~--~~~~~~~~tt~ 572 (1398)
T Consensus 568 P~~G~PIig~iQD~IlG~Y~LT~~~~~~~geg~~F~~~~e~~~ay~~~~i~l~~~I~lp~~~I~kp~~l~~~~~~i~TT~ 647 (1438)
T PRK02173 568 PKDGEPIINPSQDMILGLYYLTIEKAGAKGEGKFFSTYEAMLKAYEFKSVSLHARVALPFEQVKKPFIAKTMRGYIISTV 647 (1438)
T ss_pred CCCCCCEEEEHHHHHHHHHHHEECCCCCCCCCCEECCHHHHHHHHHCCCCCCCCEEECCHHHCCCCCCCCCCCCEEEECH
T ss_conf 88999547500667546565310244666876365889999999867996333235425553367656677760588471
Q ss_pred CCCCCCEEEECCCCCEEE--------------------------------EECCHHCCHHHHHHHHHHHHHCC-------
Q ss_conf 751122055458751017--------------------------------75110020136669999999808-------
Q gi|254780142|r 573 GRMIIGEILPRHHEISFD--------------------------------ICNQEMIKKNISAMVDTIYRHCG------- 613 (1398)
Q Consensus 573 Gr~~~~~ilp~~~~~~~~--------------------------------~~~~~~~k~~~~~li~~i~~~~G------- 613 (1398)
T Consensus 648 GK~Ifn~ilP~~~~~i~~~~~~~~~~~~~~~~~~~~ip~G~~~~e~i~~~~vn~~~~kk~i~~ii~~i~d~~v~i~~~e~ 727 (1438)
T PRK02173 648 GKFIFNNAFPANFPFIFDDNVDELELNYPSQIKKYVLPYGTNFREYIQNLPVNEPLNKKAIAKIVRQIFDKYVGLLTKED 727 (1438)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 99999876778788544554442112554222221256775300012444344443334577887776641152013430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780142|r 614 -------------------------------------------------------------------------------- 613 (1398)
Q Consensus 614 -------------------------------------------------------------------------------- 613 (1398)
T Consensus 728 i~gvidk~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~i~~ 807 (1438)
T PRK02173 728 IASVIDQLNFGNYQNIVLLYAKLKDYKKQKLPVPHLEILSEFTIFEYSKIYKQLQQNGPGESERVWEDHEKAELLEKVWF 807 (1438)
T ss_pred EEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 10010122335544442011100245554221023445544444321000100002565421110010002334444544
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --178999875588999999985398613212326836999999999789999998864897667888788642346589
Q gi|254780142|r 614 --QKSTVAFCDDLMRLGFRYACSSGISFGKDDIIVPESKEKIIAEADKMVKEYENQYNDGLITRGEKYNKVVDLWGKTTD 691 (1398)
Q Consensus 614 --~~~~~~~l~~~~~l~~~~l~~~GfSigi~D~~~~~~k~~~i~~a~~~~~~~~~~~~~G~~t~~e~~~~i~~~~~~~~~ 691 (1398)
T Consensus 808 ~~~~~~a~~LD~ik~lGf~~at~sG~SigI~Di~~~~~k~e~I~eae~~v~~l~~~y~~Gllt~~Er~~~~i~~ws~~~d 887 (1438)
T PRK02173 808 KYNNMVASVLDKIKDLGFKFSTLSGTTISISDIKTSPKKKERIKEGENYINKLKTYYAKGLITDDERYVLTIAKWTQIKN 887 (1438)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 11205788888887642577764465011513006716899999999999999999871688377899999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHEEEEEEECCCCCC------CCCC-------CCCCCCCC
Q ss_conf 9999999998761156543222246883764225555784241120010000246------4434-------44566630
Q gi|254780142|r 692 KVTEEMMARIKRVEFDPETGRQKKMNSIFMMSHSGARGSIHQMRQLGGMRGLIAK------PSGE-------IIESPIRS 758 (1398)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~M~~SGAKGS~~qi~ql~Gqq~l~gk------p~G~-------~~~~PV~~ 758 (1398)
T Consensus 888 ~v~~~~~k~l~----------~~~~N~i~~Ma~SGAKGS~~NIsQmaGmrG~~~~~gkrl~~~~~~eri~r~~ie~PV~s 957 (1438)
T PRK02173 888 DIQEDLKKIIK----------DNPQNSLFMMMNSGARGNISNFVQLAGMRGLMANNTKALKADAENERVVRSTVEIPVKS 957 (1438)
T ss_pred HHHHHHHHHHH----------CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999864----------28888658877046768899999986463410477764678877664545544467400
Q ss_pred HHHCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHCCCEEEEECCCCCCCCEEEEEEE--CCEEEEEECCCC
Q ss_conf 111088898976405761032210121015674011015423014327751388766651211100--884886500010
Q gi|254780142|r 759 HFKGGLCGFEFFQSCVGGRKGLLDVVMRTASSGYLSRRLVDVAQNCVVNQVDCNTKKGLTITHIVD--SGQVVYSLGSRV 836 (1398)
Q Consensus 759 sF~~GL~p~EfFfhamgGReGLiDTAvKTA~SGYlqRrLvk~~eDl~V~~~D~~t~~g~~~~~~~~--~~~~~~~l~~~~ 836 (1398)
T Consensus 958 SF~eGLtp~EfFfHtmGGREGLiDTAVKTAeSGYLQRRLVkvleDliV~~dDcgt~~G~~v~di~d~~~~~ii~~L~eri 1037 (1438)
T PRK02173 958 SFLEGLTAYEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVREEDCGSDFGFVVKDIIDTKTNTIIVPLLERI 1037 (1438)
T ss_pred HHHCCCCHHHHEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEHHHHH
T ss_conf 12048973661010223112315534665443225889999741248986357875886866534068983887814522
Q ss_pred CCCCCHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHCCCHHHHHHHCCCCCEECHHHCCCCHH
Q ss_conf 12211442017789718851786578999999997598402023310003551865788754201785200010146021
Q gi|254780142|r 837 LGRTALDDIINPLTNECIVKAGQLILESHVNEIEKCGIRSVRIRSALTCESSRGVCVLCYGRDLARGSLVNVGEAVGVIA 916 (1398)
Q Consensus 837 ~~r~~~~di~~~~~~~~i~~~~~~i~~~~~~~i~~~~i~~v~irs~lt~~~~~~v~~~cy~~~l~~~~lv~pGe~VG~iA 916 (1398)
T Consensus 1038 ~gR~~~~~i~d~-~~~~i~~~~~li~~~~~~~i~~~~i~~v~irs~ltc~~~~gvc~~cyg~dLa~~~lV~~GEaVGiIA 1116 (1438)
T PRK02173 1038 EGRFLNKDVYDS-RGKLLASAGTLITLETAKKIVAAGIKKVEIRSILSCHTKNGVCKKCYGKDLATNRLVNIGEAVGIIA 1116 (1438)
T ss_pred HCCEEHHHCCCC-CCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCHHHHHH
T ss_conf 140002320188-8858873887079999999998699789721433311322088998474667389288875678888
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCEEEEEECCCH
Q ss_conf 11100788987764202454322211220240148768972113465178877897427604664067760000001100
Q gi|254780142|r 917 AQSIGEPGTQLTMRTFHLGGAVTVMDRSFIESPCDGIVKIKNRNVCRNSTNDLISMGRNTTLQILDMSGQEQYSHRIMYG 996 (1398)
Q Consensus 917 AQSIGEP~TQmTLnTFHfAGVAS~~~~~~iknvTlGVPRlkEi~~~~n~~~~~i~vs~~~~~~i~d~~~~~~~~~ki~~~ 996 (1398)
T Consensus 1117 AQSIGEPgTQMTLrTFH~gGvA~~------~dIT~G~pRv~El~ea~--------------------------------- 1157 (1438)
T PRK02173 1117 AQSIGEPGTQLTMRTFHTGGVAGV------EDITGGFGRLIELIDAH--------------------------------- 1157 (1438)
T ss_pred HHHCCCCHHHHHHHHHHCCCCCCC------CCCCCCCCCHHHHHCCC---------------------------------
T ss_conf 882797076676870501423674------44456761376652043---------------------------------
Q ss_pred HCCCCCCCCEEECCEEEEECCCCCCEEEECCCCEEEEEEECCCCEEHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCEEEE
Q ss_conf 00135678553225078621354311320246368975312783200123023686026775101101221238534774
Q gi|254780142|r 997 AKLFVDDGGVIECGQRISEWDPHTFPIITEVSGTVGFEDLVDGISVIESIGESTGIAKRKVIDWRFASRSQNLKPAIVVT 1076 (1398)
Q Consensus 997 ~~~~v~~~~~v~~~~ii~~~Dp~~~~i~~e~~~~v~~~~~~~~~~~~~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~i~ 1076 (1398)
T Consensus 1158 -------------------------------------------------------------------------------- 1157 (1438)
T PRK02173 1158 -------------------------------------------------------------------------------- 1157 (1438)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCCCEEEECHHHHCCCCCCCCCCCHHHHHHHHHCCCC-CCEECCCCC
Q ss_conf 2778253224788420213778445413676135484222101320245543367732889887525111-101113478
Q gi|254780142|r 1077 DENGVVLKSARGTDARWFLPVDALLSVSPGQKVSTGDVLARLPISSAKTKDITSGLPRVAELFEARRPKN-HAILAEISG 1155 (1398)
Q Consensus 1077 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~d~l~~~~~~~~k~~DIt~GLPrV~eLFEar~pk~-~aiisei~G 1155 (1398)
T Consensus 1158 -----------------------------------------------------------------~~p~~~~a~i~~~~g 1172 (1438)
T PRK02173 1158 -----------------------------------------------------------------EHPWGRPAKISPYYG 1172 (1438)
T ss_pred -----------------------------------------------------------------CCCCCCCCEEEEECC
T ss_conf -----------------------------------------------------------------688998655774156
Q ss_pred EEEEEEECCCCE--------EEEEEECCCCCCEEEEEECCCCEEEEECCCEEECCCEEECCCCCHHHHHHHHCHHHHHHH
Q ss_conf 678633127944--------999983689840268981389658984198774086464389999999875279999999
Q gi|254780142|r 1156 TIRIKRNYKNKS--------RVVIEPFEDGVEPAEYFIPKNKHFYLQDGDHVEKGDYILDGNPVPQDILRIKGVEALASY 1227 (1398)
Q Consensus 1156 iv~i~~~~~~k~--------~~vi~~~~~g~~~~e~~ip~~~~l~v~dgd~V~~gd~lt~Gsid~~eIl~vlGIEAAR~~ 1227 (1398)
T Consensus 1173 ~v~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~v~~gd~v~~G~~l~~G~~~~~~il~~~g~~~~~~y 1252 (1438)
T PRK02173 1173 IITKIKDLKEKNAANKGFLITIEYKTSKNEKATHIIRVEQSQKLRVKVGDKVIPGQKLVEGPIILKELLEVSDARTVQNY 1252 (1438)
T ss_pred EEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHCCHHHHHHH
T ss_conf 78786303666554455137898874789824799975479875667999976799847899998999884499999999
Q ss_pred HHHHHHHHHHHHCCEECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHH
Q ss_conf 99999999998097006125601247628614894188645456641069999999999997289875201210000145
Q gi|254780142|r 1228 LINEVQEVYRLEGVAINHKHIEVVVRHMLQKVEITDPADTEYILGDNVDRIEVEELNRSLAQQGKKLVSFSPILQGITKA 1307 (1398)
Q Consensus 1228 Ii~EIq~V~~~~Gi~IN~RHIeLIaD~MT~kg~I~~~Gdt~~i~g~~Inr~~~~~~Nr~~~~~g~~pa~~~p~llGITKa 1307 (1398)
T Consensus 1253 l~~evq~vyr~qGv~i~dKhiEvivrqml~kv~i~~~gds~~~~g~~vd~~~~~~~n~~~~~~g~~~a~~~~~l~Gitka 1332 (1438)
T PRK02173 1253 LLKEIQKIYRMQGISISDKYIEIIIRQMLSKIQIIEPGDSNFFIGSIVDIFDYQEENGQLLSQGKKPAFGKVIIKGAKQI 1332 (1438)
T ss_pred HHHHHHHHHHHCCCEECCCEEEEHHHHHCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCHH
T ss_conf 99999999997597502547885365650722897288877889888459999999999998499875010000232332
Q ss_pred HHCCCCHHHHCCCHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHH
Q ss_conf 302310776504025899999974528552366532215507305655354665331210251022211
Q gi|254780142|r 1308 SLQTKSFISAASFQETTKVLTEAAIAGKVDTLDGFKENVIVGRSIPAGTGAILHEKRRVAMNRDQMILK 1376 (1398)
Q Consensus 1308 sl~t~S~Ls~ASFEeT~~vL~eAAi~ge~D~L~GvSENIIlGqliP~GTG~f~~~~~~~~~~~~~~~~~ 1376 (1398)
T Consensus 1333 sl~t~S~lsaASFqeTt~vLt~Aai~gk~D~L~GlkENviiG~lIPaGTg~~~~~~~~~~~~~~~~~~~ 1401 (1438)
T PRK02173 1333 PLLSDSFLAAASYQETSKILVHSSISSQIDKLEGLKENIIVGHKIPAGTNSNYEPKSKYDIRNPKSYFR 1401 (1438)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHC
T ss_conf 342346998861214678999998758987678843676426700077782004311245448165514