HHsearch alignment for GI: 254780142 and conserved domain: PRK02995

>PRK02995 DNA-directed RNA polymerase subunit beta'; Provisional.
Probab=100.00  E-value=0  Score=2926.51  Aligned_cols=1157  Identities=51%  Similarity=0.847  Sum_probs=1070.6

Q ss_pred             CCCCEEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             86405368984588678850144897175542545687568873362136856677215664156344883567578853
Q gi|254780142|r   14 DDRGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECICGKYKRMKYKGIICEKCGVEV   93 (1398)
Q Consensus        14 ~~~~i~~i~f~l~spe~I~~~S~~ev~~~et~n~~~~kP~~~Gl~d~ri~g~~~d~~c~Cg~~~~~~~~g~~C~~Cg~~~   93 (1398)
T Consensus         3 ~~~~f~~i~i~laSpe~Ir~wS~geV~kpeTinyrt~kPe~~GLfce~Ifgp~kd~eC~Cgkyk~~~~kg~~C~~Cgvev   82 (1291)
T PRK02995          3 DVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEV   82 (1291)
T ss_pred             CCCCCCEEEEEECCHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEE
T ss_conf             67765728998148899998618356787652278899988883251422988587671786133246987769998650


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCC-------CH------H----
Q ss_conf             047757876772002776220130122578999980999656301332111232178865-------10------4----
Q gi|254780142|r   94 TLSSVRRDRMAHIDLASPVAHPWFLKSLPSRISTLLGMSLRDVERVLYFESYVVVDPGLS-------SL------E----  156 (1398)
Q Consensus        94 ~~~~~r~ghfGhIeLa~PV~Hi~f~k~~~~~i~~~l~~~~~~~~~v~y~~~~~~~~~~~~-------~~------~----  156 (1398)
T Consensus        83 t~~~vrr~rmGHIeLa~PV~Hiw~~k~~ps~i~~ll~~~~k~le~viyf~~~iv~~~~~~~~~~~~~~l~~~~~~~~~~~  162 (1291)
T PRK02995         83 TRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKVIYFAAYMITSVDEEARHNDLPTLEAEMDVEKKQL  162 (1291)
T ss_pred             CCCCCCCCCCCCEEECCCCEEECCCCCCCHHHHHHHCCCHHHHHEEEEEECEEECCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             55752325456740178725004127980399998698987821676520326035563211122023444554445554


Q ss_pred             --------------------------------------------------------------------HHCCCC-HHHHH
Q ss_conf             --------------------------------------------------------------------322369-99998
Q gi|254780142|r  157 --------------------------------------------------------------------KYQILT-EEEYV  167 (1398)
Q Consensus       157 --------------------------------------------------------------------~~~~~~-~~~~~  167 (1398)
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (1291)
T PRK02995        163 EDQRDADIEARAQKLEADLAELEAEGAKADARRKVRDGAEREMRQIRDRAQREIDRLDEVWDTFKKLKPKQLIGDELLYR  242 (1291)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf             32011256665544323344432101101455542010245677776655555555666655430356322222188999


Q ss_pred             HHHHHCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf             86763585550611552677888772674889999998731032203478864477888666634898511286304507
Q gi|254780142|r  168 EAVSQFGQDQFIAMMGADAIYELLIALDLQNLALTLRDQLSKSSSIFRRKKIIKRLKIVDSFITSGNNPGWMIIRKLPVL  247 (1398)
Q Consensus       168 ~~~~~~~~~~~~~~~g~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~Pewmil~~lpV~  247 (1398)
T Consensus       243 ~~~~~~~-~~f~~~~gaeai~~ll~~~dl~~~~~~l~~~~~~~~-~~~~~~~~krl~~v~~f~~s~n~Pewmil~vlPV~  320 (1291)
T PRK02995        243 ELRDRYG-DYFTGGMGAEAIQKRLENFDLDAEAESLRETIRNGK-GQKKLRALKRLKVVAAFLTTGNSPMGMVLDAVPVI  320 (1291)
T ss_pred             HHHHHHH-HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf             9998640-233413429999999985799999999999986304-68999999999999999966999440210034779


Q ss_pred             CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf             62235138846973131003789999999869999998739835677769999999888874277678772478765067
Q gi|254780142|r  248 PPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIIRNEKRMLQESVDALFDNGRHKRVVTGANRRPLK  327 (1398)
Q Consensus       248 P~~~RP~v~~~~g~~~~dDlt~~~~~Ii~~N~~Lk~~~~~~ap~~i~~~~~~lLQ~~v~~~~dn~~~~~~~~~~~~rp~k  327 (1398)
T Consensus       321 Pp~lRP~v~ldgg~~a~sDLn~ly~~II~~NnrLk~~~~~gaP~~ii~ne~~mLQ~~V~al~DN~~~g~p~~~~~~RpLK  400 (1291)
T PRK02995        321 PPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLK  400 (1291)
T ss_pred             CCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             98787516968986556225889999999889999999769968999889999999999997068888876478999555


Q ss_pred             HHHHHHCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
Q ss_conf             89986102378200034651004577403412554354620034898776128999999998798666300010012248
Q gi|254780142|r  328 SLSDMLKGKQGRFRTNLLGKRVDYSGRSVIVAGPELQLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKER  407 (1398)
Q Consensus       328 s~~~rlkgK~GrfR~nl~GKRVdfs~RsVI~pdP~l~~~evgvP~~~A~~L~~P~~~~~L~~~g~~~~i~~~k~~i~~~~  407 (1398)
T Consensus       401 Sls~rLKGKeGRFR~NLmGKRVDfSaRSVIspDPnL~i~EvGVP~~mA~eLt~Pfvi~rl~~~~~~~nik~ak~~v~r~~  480 (1291)
T PRK02995        401 SLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR  480 (1291)
T ss_pred             CHHHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHHHHCC
T ss_conf             38998467665120577766526589863617999865502684899987372643575776267566178999988249


Q ss_pred             CCEEHHHHHHHCCCEEEECCCCCCEECCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH
Q ss_conf             82501326665697899757631011140123589944954797312254546787754569974689999999999876
Q gi|254780142|r  408 PEVWDVLAEVVHQHVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQLEARVLML  487 (1398)
Q Consensus       408 ~~v~~v~rhl~~gd~Vl~NRqPsLHr~Simah~~~v~~~~t~rln~~vc~pyNADFDGDEMnlHvPqs~eAraEa~~Lm~  487 (1398)
T Consensus       481 ~~v~dvle~vi~~~~VLfNRQPTLHRmSImah~~kv~~gkT~RLn~~vC~pYNADFDGDEMNlHvPQS~eAraEa~~Lm~  560 (1291)
T PRK02995        481 PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQMAVHLPLSAEAQAEARILML  560 (1291)
T ss_pred             CHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEECHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf             54778898774277146615752131533551478736845885510067666887773346427799999999999860


Q ss_pred             HHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC-----
Q ss_conf             750542378878204402589999998733678874468141799999999988898678523652046456676-----
Q gi|254780142|r  488 STNNLLHPASGAPVTVPSQDMVLGLCYLSTVHEGDPGEGMLFADMGEVYHALENKIVTLHSKIRGRYKSVDKDGN-----  562 (1398)
Q Consensus       488 ~~~niisP~~g~Pi~~~~QD~i~G~y~lT~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~-----  562 (1398)
T Consensus       561 v~~nilsP~~G~Piig~~QD~ilG~y~LT~~~~~~~~e~~~f~~~~~~~~~~~~~~l~l~~~i~i~~~~~~~~~~~~~~~  640 (1291)
T PRK02995        561 SSNNILKPADGRPVAMPSQDMVTGLYYLTTVKEGAKGEGRPFSSPAEAIMAFDRGELSLQAKVKIRLTQLRPPAEIEAEL  640 (1291)
T ss_pred             CCCCEEECCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf             33277327999821231189998889875036664456562277999997534386632672799666656776543310


Q ss_pred             --------CCCEEECCCCCCCCCCEEEECCCCCEEEEECCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --------142452179775112205545875101775110020136669999999808178999875588999999985
Q gi|254780142|r  563 --------SISKIYDTTPGRMIIGEILPRHHEISFDICNQEMIKKNISAMVDTIYRHCGQKSTVAFCDDLMRLGFRYACS  634 (1398)
Q Consensus       563 --------~~~~~~~tt~Gr~~~~~ilp~~~~~~~~~~~~~~~k~~~~~li~~i~~~~G~~~~~~~l~~~~~l~~~~l~~  634 (1398)
T Consensus       641 ~~~~~~~~~~~~~~~tt~Gr~ifn~~lp~~~~----~i~g~l~Kk~lg~li~~l~~~yg~~~~~~~ld~l~~l~~~~l~~  716 (1291)
T PRK02995        641 FGPEGWQPGDAWTAETTLGRVLFNELLPEDYP----FVNEQMDKKVLSAIVNDLAERYPMIVVAQTLDKLKDAGFYWATR  716 (1291)
T ss_pred             CCCCCCCCCCCEEECCCCCEEEECCCCCCCCC----EEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             47656776763443177674764251478775----35414433148899999999839999999999999999999987


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             39861321232683699999999978999999886489766788878864234658999999999987611565432222
Q gi|254780142|r  635 SGISFGKDDIIVPESKEKIIAEADKMVKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMARIKRVEFDPETGRQK  714 (1398)
Q Consensus       635 ~GfSigi~D~~~~~~k~~~i~~a~~~~~~~~~~~~~G~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  714 (1398)
T Consensus       717 ~GfSiGI~D~~~~~~k~eii~~~~~~~~~i~~~~~~G~lt~~e~~~~l~~il~~a~d~v~~~~~~~l------------~  784 (1291)
T PRK02995        717 SGVTVAMSDVLVPPEKQEILDGYEAQADKVEKQYERGLLTDDERRQELVEIWTEATDEVAEAMEENF------------P  784 (1291)
T ss_pred             CCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC------------C
T ss_conf             5865407650687789999999999999999987505565078999999999999999999999657------------8


Q ss_pred             CCCCEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCEEE
Q ss_conf             46883764225555784241120010000246443444566630111088898976405761032210121015674011
Q gi|254780142|r  715 KMNSIFMMSHSGARGSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKGGLCGFEFFQSCVGGRKGLLDVVMRTASSGYLS  794 (1398)
Q Consensus       715 ~~N~~~~M~~SGAKGS~~qi~ql~Gqq~l~gkp~G~~~~~PV~~sF~~GL~p~EfFfhamgGReGLiDTAvKTA~SGYlq  794 (1398)
T Consensus       785 ~~N~~~~Mv~SGAKGS~~NIsQm~g~rGl~~~~~G~~ip~pI~nsF~~GLtp~EfFfHamgGREGLiDTAVKTA~SGYLq  864 (1291)
T PRK02995        785 DDNPIIMIVDSGARGNMMQIRQLAGMRGLVANPKGEIIPRPIKSSFREGLTVLEYFISTHGARKGLADTALRTADSGYLT  864 (1291)
T ss_pred             CCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             88859998660576789899998640677668988847763324411169788887616132333100421025412789


Q ss_pred             EHHHHHHCCCEEEEECCCCCCCCEEEEEEECCE----EEEEECCCCCCCCCHHHCCCCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf             015423014327751388766651211100884----8865000101221144201778971885178657899999999
Q gi|254780142|r  795 RRLVDVAQNCVVNQVDCNTKKGLTITHIVDSGQ----VVYSLGSRVLGRTALDDIINPLTNECIVKAGQLILESHVNEIE  870 (1398)
Q Consensus       795 RrLvk~~eDl~V~~~D~~t~~g~~~~~~~~~~~----~~~~l~~~~~~r~~~~di~~~~~~~~i~~~~~~i~~~~~~~i~  870 (1398)
T Consensus       865 RRLVkv~eDv~Vr~dDCgT~~gi~~~~~~~~~~g~~~~~~~~~~~~~~r~l~~d~~~~-~~~vi~~~~~~i~~~~~~~~~  943 (1291)
T PRK02995        865 RRLVDVSQDVIVREEDCGTERGIVVPIAERDADGTLVRDENVETSVYARTLAADAVDA-DGNVVAEAGTDLGDPLIDALL  943 (1291)
T ss_pred             HHHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHCCC-CCCEEEECCCCCCHHHHHHHH
T ss_conf             9988875555999726885068043456755887555330235557763438861388-998885488627999999999


Q ss_pred             HCCCCEEECCCCCCHHHHHCCCHHHHHHHCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
Q ss_conf             75984020233100035518657887542017852000101460211110078898776420245432221122024014
Q gi|254780142|r  871 KCGIRSVRIRSALTCESSRGVCVLCYGRDLARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFIESPC  950 (1398)
Q Consensus       871 ~~~i~~v~irs~lt~~~~~~v~~~cy~~~l~~~~lv~pGe~VG~iAAQSIGEP~TQmTLnTFHfAGVAS~~~~~~iknvT  950 (1398)
T Consensus       944 ~~gi~~v~iRS~Ltc~s~~gvc~~cYgr~Lat~klVepGEaVGiIAAQSIGEPgTQMTLnTFH~AGvas----------- 1012 (1291)
T PRK02995        944 AAGVEEVKVRSVLTCESKTGVCAKCYGRSLATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVGD----------- 1012 (1291)
T ss_pred             HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCC-----------
T ss_conf             759987862143354467889999998877634768888702343103368874203265642155443-----------


Q ss_pred             CCEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCEEEEEECCCHHCCCCCCCCEEECCEEEEECCCCCCEEEECCCCE
Q ss_conf             87689721134651788778974276046640677600000011000013567855322507862135431132024636
Q gi|254780142|r  951 DGIVKIKNRNVCRNSTNDLISMGRNTTLQILDMSGQEQYSHRIMYGAKLFVDDGGVIECGQRISEWDPHTFPIITEVSGT 1030 (1398)
Q Consensus       951 lGVPRlkEi~~~~n~~~~~i~vs~~~~~~i~d~~~~~~~~~ki~~~~~~~v~~~~~v~~~~ii~~~Dp~~~~i~~e~~~~ 1030 (1398)
                                                                                                      
T Consensus      1013 -------------------------------------------------------------------------------- 1012 (1291)
T PRK02995       1013 -------------------------------------------------------------------------------- 1012 (1291)
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             EEEEEECCCCEEHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCEEEECCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf             89753127832001230236860267751011012212385347742778253224788420213778445413676135
Q gi|254780142|r 1031 VGFEDLVDGISVIESIGESTGIAKRKVIDWRFASRSQNLKPAIVVTDENGVVLKSARGTDARWFLPVDALLSVSPGQKVS 1110 (1398)
Q Consensus      1031 v~~~~~~~~~~~~~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~ 1110 (1398)
                                                                                                      
T Consensus      1013 -------------------------------------------------------------------------------- 1012 (1291)
T PRK02995       1013 -------------------------------------------------------------------------------- 1012 (1291)
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCEEEECHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCE
Q ss_conf             48422210132024554336773288988752511110111347867863312794499998368984026898138965
Q gi|254780142|r 1111 TGDVLARLPISSAKTKDITSGLPRVAELFEARRPKNHAILAEISGTIRIKRNYKNKSRVVIEPFEDGVEPAEYFIPKNKH 1190 (1398)
Q Consensus      1111 ~~d~l~~~~~~~~k~~DIt~GLPrV~eLFEar~pk~~aiisei~Giv~i~~~~~~k~~~vi~~~~~g~~~~e~~ip~~~~ 1190 (1398)
T Consensus      1013 ----------------nITlGvPRlkEIfeAr~PK~~a~i~e~~g~V~ie~~~~-~~~~~i~~-dd~~~~~~y~i~~~~~ 1074 (1291)
T PRK02995       1013 ----------------DITQGLPRVQELFEARTPKGKAPIAEVAGRVRIEDGER-FRKITIVP-DDGSEEVVYKVSKRQR 1074 (1291)
T ss_pred             ----------------CCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCC-CEEEEEEC-CCCCCEEEEECCCCCE
T ss_conf             ----------------32367563899985148787763133103899973377-05999977-9998357997257855


Q ss_pred             EEEECCCEEECCCEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf             89841987740864643899999998752799999999999999999809700612560124762861489418864545
Q gi|254780142|r 1191 FYLQDGDHVEKGDYILDGNPVPQDILRIKGVEALASYLINEVQEVYRLEGVAINHKHIEVVVRHMLQKVEITDPADTEYI 1270 (1398)
Q Consensus      1191 l~v~dgd~V~~gd~lt~Gsid~~eIl~vlGIEAAR~~Ii~EIq~V~~~~Gi~IN~RHIeLIaD~MT~kg~I~~~Gdt~~i 1270 (1398)
T Consensus      1075 l~v~dgd~V~~g~~l~~g~~dp~~iLri~G~~~~~~~lv~evq~Vyr~qGV~I~dKhievIvrqml~kv~i~d~gdt~~l 1154 (1291)
T PRK02995       1075 LRVSDGDHVEVGQQLVEGSADPHEVLRVLGPRAVQVHLVDEVQEVYRSQGVSIHDKHIEVIVRQMLRRVTVIDSGDTEFL 1154 (1291)
T ss_pred             EEEECCCEEECCCEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCEEHHHHHHHHCEEEEEECCCCCCC
T ss_conf             78735999964875034889989998862999999999999999999659752101007888866207899816866655


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCEECCCCCCEEEECCC
Q ss_conf             66410699999999999972898752012100001453023107765040258999999745285523665322155073
Q gi|254780142|r 1271 LGDNVDRIEVEELNRSLAQQGKKLVSFSPILQGITKASLQTKSFISAASFQETTKVLTEAAIAGKVDTLDGFKENVIVGR 1350 (1398)
Q Consensus      1271 ~g~~Inr~~~~~~Nr~~~~~g~~pa~~~p~llGITKasl~t~S~Ls~ASFEeT~~vL~eAAi~ge~D~L~GvSENIIlGq 1350 (1398)
T Consensus      1155 ~g~~v~~~~~~~~n~~~~~~~~~~~~~r~~llGITr~~l~t~S~Ls~ASFqeTt~vL~dAAi~gk~D~l~GlkEnIIlG~ 1234 (1291)
T PRK02995       1155 PGELVDRARFEAENRRVVAEGGEPASGRPVLMGITKASLATESWLSAASFQETTRVLTDAAINGRSDKLIGLKENVIIGK 1234 (1291)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
T ss_conf             73288799999999999983997113422146640043112219998613516799999998479875778102430478


Q ss_pred             CCCCCCCHHHHHHHHHHCCC--HHHHHHHH
Q ss_conf             05655354665331210251--02221112
Q gi|254780142|r 1351 SIPAGTGAILHEKRRVAMNR--DQMILKER 1378 (1398)
Q Consensus      1351 liP~GTG~f~~~~~~~~~~~--~~~~~~~~ 1378 (1398)
T Consensus      1235 liP~GTGl~~y~~~~~~~~~~~~~~~~~~~ 1264 (1291)
T PRK02995       1235 LIPAGTGISRYRNIRVEPTEEARAAAYTIP 1264 (1291)
T ss_pred             CCCCCCCHHHHCCCCCCCCHHHHHHHCCCC
T ss_conf             678775938864860565766774426788