HHsearch alignment for GI: 254780142 and conserved domain: pfam05183

>pfam05183 RdRP RNA dependent RNA polymerase. This family of proteins are eukaryotic RNA dependent RNA polymerases. These proteins are involved in post transcriptional gene silencing where they are thought to amplify dsRNA templates.
Probab=90.52  E-value=0.3  Score=27.34  Aligned_cols=52  Identities=27%  Similarity=0.379  Sum_probs=31.7

Q ss_pred             HHCCCEEEECCCCCCEECCEEEEEEEEECC------------CEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf             656978997576310111401235899449------------5479731225454678775456997
Q gi|254780142|r  417 VVHQHVVLLNRAPSLHRLSMQAFEPKIISG------------KAIQLHPLVCAGYNADFDGDQMAVY  471 (1398)
Q Consensus       417 l~~gd~Vl~NRqPsLHr~Simah~~~v~~~------------~t~rln~~vc~pyNADFDGDEMnlH  471 (1398)
T Consensus       228 ~~~g~-VlV~RnP~lhPGDiq~~~AV~~p~L~hl~dvIVFp~kG~rpl~~~lS--GgDlDGD~y~V~  291 (381)
T pfam05183       228 VIGGD-VLVTRNPCLHPGDIRVLKAVDVPELRHLKDVIVFPQKGDRPLPSELS--GGDLDGDLYFVI  291 (381)
T ss_pred             EEEEE-EEEEECCCCCCCCEEEEECCCCHHHHCCCCEEEECCCCCCCCHHHHC--CCCCCCCEEEEE
T ss_conf             55003-99983676688854788626765564138789948989988557735--778788657997