BLAST/PSIBLAST alignment of GI: 254780142 and GI: 315122744 at iteration 1
>gi|315122744|ref|YP_004063233.1| DNA-directed RNA polymerase subunit beta' [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1398
>gi|313496146|gb|ADR52745.1| DNA-directed RNA polymerase subunit beta' [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1398
 Score = 2611 bits (6768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1260/1398 (90%), Positives = 1322/1398 (94%)

Query: 1    MQQEVMRFFNPWTDDRGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCA 60
            MQQEVMRFFNPWTDDR FDSVRISIASP KI SLSYGEIKKPETINYRTFKPERDGLFCA
Sbjct: 1    MQQEVMRFFNPWTDDREFDSVRISIASPEKILSLSYGEIKKPETINYRTFKPERDGLFCA 60

Query: 61   RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLSSVRRDRMAHIDLASPVAHPWFLKS 120
            RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLS VRRDRMAHI LASPVAHPWFLKS
Sbjct: 61   RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLSCVRRDRMAHIQLASPVAHPWFLKS 120

Query: 121  LPSRISTLLGMSLRDVERVLYFESYVVVDPGLSSLEKYQILTEEEYVEAVSQFGQDQFIA 180
            LPSRISTLL M+LRDVERVLYFESYVV+DPGLSSLEKYQILTEEEYVEAV+ FGQDQFIA
Sbjct: 121  LPSRISTLLDMTLRDVERVLYFESYVVIDPGLSSLEKYQILTEEEYVEAVNDFGQDQFIA 180

Query: 181  MMGADAIYELLIALDLQNLALTLRDQLSKSSSIFRRKKIIKRLKIVDSFITSGNNPGWMI 240
            MMGADAI ELLI LDL NLA+TLR QLSKSSSIFRRKKIIKRLKIVDSF+ SGN P WM+
Sbjct: 181  MMGADAIRELLILLDLPNLAITLRGQLSKSSSIFRRKKIIKRLKIVDSFLISGNRPEWMV 240

Query: 241  IRKLPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIIRNEKRM 300
            +  +PVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEII+RNEKRM
Sbjct: 241  MTVIPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIVRNEKRM 300

Query: 301  LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGRSVIVAG 360
            LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGR+VIVAG
Sbjct: 301  LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGRTVIVAG 360

Query: 361  PELQLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ 420
            PEL LHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ
Sbjct: 361  PELLLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ 420

Query: 421  HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQL 480
            HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVY V+S EAQL
Sbjct: 421  HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYVVLSLEAQL 480

Query: 481  EARVLMLSTNNLLHPASGAPVTVPSQDMVLGLCYLSTVHEGDPGEGMLFADMGEVYHALE 540
            EARVLM+STNNLLHPASG PV VPSQDMVLGL YLS +HEGDPGEGM+FAD+ EVYHALE
Sbjct: 481  EARVLMMSTNNLLHPASGVPVVVPSQDMVLGLYYLSIIHEGDPGEGMVFADVDEVYHALE 540

Query: 541  NKIVTLHSKIRGRYKSVDKDGNSISKIYDTTPGRMIIGEILPRHHEISFDICNQEMIKKN 600
             K+VTLHSKIRGRYK++D+ GN +SKIY+TTPGRMI+GEILPRHH ISFDICNQEM+KKN
Sbjct: 541  RKVVTLHSKIRGRYKNIDESGNWVSKIYETTPGRMILGEILPRHHNISFDICNQEMVKKN 600

Query: 601  ISAMVDTIYRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDIIVPESKEKIIAEADKM 660
            ISAMVD +YRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDI+VP+SK KIIAEADKM
Sbjct: 601  ISAMVDAVYRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDIVVPKSKGKIIAEADKM 660

Query: 661  VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMARIKRVEFDPETGRQKKMNSIF 720
            VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMM+ IK+VEFDPETGRQKKMNSIF
Sbjct: 661  VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMSLIKQVEFDPETGRQKKMNSIF 720

Query: 721  MMSHSGARGSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKGGLCGFEFFQSCVGGRKGL 780
            MMSHSGAR S+HQMRQLGGMRGLIAKPSGEIIESPIRSHFK GL GFEFFQSCVGGRKGL
Sbjct: 721  MMSHSGARSSVHQMRQLGGMRGLIAKPSGEIIESPIRSHFKDGLYGFEFFQSCVGGRKGL 780

Query: 781  LDVVMRTASSGYLSRRLVDVAQNCVVNQVDCNTKKGLTITHIVDSGQVVYSLGSRVLGRT 840
            LDVVMRTASSGYLSRRLVDVAQNC+VNQVDC T KGL+ITHIVDSGQVVYSLGSRVLGR 
Sbjct: 781  LDVVMRTASSGYLSRRLVDVAQNCIVNQVDCGTNKGLSITHIVDSGQVVYSLGSRVLGRI 840

Query: 841  ALDDIINPLTNECIVKAGQLILESHVNEIEKCGIRSVRIRSALTCESSRGVCVLCYGRDL 900
            ALDDI+NP+TN CI+KAG LILESHV EIEK GIRSVRIRSALTCES +GVC LCYGRDL
Sbjct: 841  ALDDIVNPVTNACIIKAGGLILESHVTEIEKSGIRSVRIRSALTCESKKGVCSLCYGRDL 900

Query: 901  ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFIESPCDGIVKIKNRN 960
            ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSF+ES C+G VKIKNR+
Sbjct: 901  ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFLESSCEGTVKIKNRS 960

Query: 961  VCRNSTNDLISMGRNTTLQILDMSGQEQYSHRIMYGAKLFVDDGGVIECGQRISEWDPHT 1020
            VCRNS NDLISMGRNTTLQILD+SGQEQ SHRIMYGAKLFVDDG +++ GQR+SEWDPHT
Sbjct: 961  VCRNSANDLISMGRNTTLQILDVSGQEQSSHRIMYGAKLFVDDGDIVKYGQRVSEWDPHT 1020

Query: 1021 FPIITEVSGTVGFEDLVDGISVIESIGESTGIAKRKVIDWRFASRSQNLKPAIVVTDENG 1080
            FP+ITEVSG V FEDLVDG+SVIES+GESTGIAKRKVIDWRF SR QNLKPAIVV DENG
Sbjct: 1021 FPMITEVSGIVDFEDLVDGLSVIESVGESTGIAKRKVIDWRFTSRGQNLKPAIVVKDENG 1080

Query: 1081 VVLKSARGTDARWFLPVDALLSVSPGQKVSTGDVLARLPISSAKTKDITSGLPRVAELFE 1140
             VLK +RGTDARWFLPVDA+LSVSPGQKVS GDVLAR PISSAKTKDITSGLPRVAELFE
Sbjct: 1081 AVLKFSRGTDARWFLPVDAILSVSPGQKVSVGDVLARSPISSAKTKDITSGLPRVAELFE 1140

Query: 1141 ARRPKNHAILAEISGTIRIKRNYKNKSRVVIEPFEDGVEPAEYFIPKNKHFYLQDGDHVE 1200
            ARRPKNHAILAE+SG+I+IKRNYKNKSRV+IEPFE+GVEP EYFIPKNKHFYLQDGD VE
Sbjct: 1141 ARRPKNHAILAEVSGSIKIKRNYKNKSRVLIEPFEEGVEPVEYFIPKNKHFYLQDGDKVE 1200

Query: 1201 KGDYILDGNPVPQDILRIKGVEALASYLINEVQEVYRLEGVAINHKHIEVVVRHMLQKVE 1260
            KGDYIL+GNP P DILRIKG+EALASYLINEVQEVYRLEGV IN KHIEVV+R MLQKVE
Sbjct: 1201 KGDYILEGNPAPHDILRIKGIEALASYLINEVQEVYRLEGVLINDKHIEVVIRQMLQKVE 1260

Query: 1261 ITDPADTEYILGDNVDRIEVEELNRSLAQQGKKLVSFSPILQGITKASLQTKSFISAASF 1320
            ITDPADTEYILGDN+DR+EVEELNRSLAQQGKK VSFSP+LQGITKASLQTKSFISAASF
Sbjct: 1261 ITDPADTEYILGDNIDRVEVEELNRSLAQQGKKQVSFSPVLQGITKASLQTKSFISAASF 1320

Query: 1321 QETTKVLTEAAIAGKVDTLDGFKENVIVGRSIPAGTGAILHEKRRVAMNRDQMILKERSN 1380
            QETTKVLTEAAIAGKVD L+G KENVIVGR IPAGTGAILHEKRR+AMNRDQMILK RSN
Sbjct: 1321 QETTKVLTEAAIAGKVDMLEGLKENVIVGRLIPAGTGAILHEKRRIAMNRDQMILKARSN 1380

Query: 1381 FSQNEDLKNTAIQGSIAE 1398
             SQ+ D KN  IQG IAE
Sbjct: 1381 SSQDSDSKNNQIQGIIAE 1398