BLAST/PSIBLAST alignment of GI: 254780142 and GI: 315122744 at iteration 1
>gi|315122744|ref|YP_004063233.1| DNA-directed RNA polymerase subunit beta' [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1398
>gi|313496146|gb|ADR52745.1| DNA-directed RNA polymerase subunit beta' [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1398
Score = 2611 bits (6768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1260/1398 (90%), Positives = 1322/1398 (94%)
Query: 1 MQQEVMRFFNPWTDDRGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCA 60
MQQEVMRFFNPWTDDR FDSVRISIASP KI SLSYGEIKKPETINYRTFKPERDGLFCA
Sbjct: 1 MQQEVMRFFNPWTDDREFDSVRISIASPEKILSLSYGEIKKPETINYRTFKPERDGLFCA 60
Query: 61 RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLSSVRRDRMAHIDLASPVAHPWFLKS 120
RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLS VRRDRMAHI LASPVAHPWFLKS
Sbjct: 61 RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLSCVRRDRMAHIQLASPVAHPWFLKS 120
Query: 121 LPSRISTLLGMSLRDVERVLYFESYVVVDPGLSSLEKYQILTEEEYVEAVSQFGQDQFIA 180
LPSRISTLL M+LRDVERVLYFESYVV+DPGLSSLEKYQILTEEEYVEAV+ FGQDQFIA
Sbjct: 121 LPSRISTLLDMTLRDVERVLYFESYVVIDPGLSSLEKYQILTEEEYVEAVNDFGQDQFIA 180
Query: 181 MMGADAIYELLIALDLQNLALTLRDQLSKSSSIFRRKKIIKRLKIVDSFITSGNNPGWMI 240
MMGADAI ELLI LDL NLA+TLR QLSKSSSIFRRKKIIKRLKIVDSF+ SGN P WM+
Sbjct: 181 MMGADAIRELLILLDLPNLAITLRGQLSKSSSIFRRKKIIKRLKIVDSFLISGNRPEWMV 240
Query: 241 IRKLPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIIRNEKRM 300
+ +PVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEII+RNEKRM
Sbjct: 241 MTVIPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIVRNEKRM 300
Query: 301 LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGRSVIVAG 360
LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGR+VIVAG
Sbjct: 301 LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGRTVIVAG 360
Query: 361 PELQLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ 420
PEL LHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ
Sbjct: 361 PELLLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ 420
Query: 421 HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQL 480
HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVY V+S EAQL
Sbjct: 421 HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYVVLSLEAQL 480
Query: 481 EARVLMLSTNNLLHPASGAPVTVPSQDMVLGLCYLSTVHEGDPGEGMLFADMGEVYHALE 540
EARVLM+STNNLLHPASG PV VPSQDMVLGL YLS +HEGDPGEGM+FAD+ EVYHALE
Sbjct: 481 EARVLMMSTNNLLHPASGVPVVVPSQDMVLGLYYLSIIHEGDPGEGMVFADVDEVYHALE 540
Query: 541 NKIVTLHSKIRGRYKSVDKDGNSISKIYDTTPGRMIIGEILPRHHEISFDICNQEMIKKN 600
K+VTLHSKIRGRYK++D+ GN +SKIY+TTPGRMI+GEILPRHH ISFDICNQEM+KKN
Sbjct: 541 RKVVTLHSKIRGRYKNIDESGNWVSKIYETTPGRMILGEILPRHHNISFDICNQEMVKKN 600
Query: 601 ISAMVDTIYRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDIIVPESKEKIIAEADKM 660
ISAMVD +YRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDI+VP+SK KIIAEADKM
Sbjct: 601 ISAMVDAVYRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDIVVPKSKGKIIAEADKM 660
Query: 661 VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMARIKRVEFDPETGRQKKMNSIF 720
VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMM+ IK+VEFDPETGRQKKMNSIF
Sbjct: 661 VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMSLIKQVEFDPETGRQKKMNSIF 720
Query: 721 MMSHSGARGSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKGGLCGFEFFQSCVGGRKGL 780
MMSHSGAR S+HQMRQLGGMRGLIAKPSGEIIESPIRSHFK GL GFEFFQSCVGGRKGL
Sbjct: 721 MMSHSGARSSVHQMRQLGGMRGLIAKPSGEIIESPIRSHFKDGLYGFEFFQSCVGGRKGL 780
Query: 781 LDVVMRTASSGYLSRRLVDVAQNCVVNQVDCNTKKGLTITHIVDSGQVVYSLGSRVLGRT 840
LDVVMRTASSGYLSRRLVDVAQNC+VNQVDC T KGL+ITHIVDSGQVVYSLGSRVLGR
Sbjct: 781 LDVVMRTASSGYLSRRLVDVAQNCIVNQVDCGTNKGLSITHIVDSGQVVYSLGSRVLGRI 840
Query: 841 ALDDIINPLTNECIVKAGQLILESHVNEIEKCGIRSVRIRSALTCESSRGVCVLCYGRDL 900
ALDDI+NP+TN CI+KAG LILESHV EIEK GIRSVRIRSALTCES +GVC LCYGRDL
Sbjct: 841 ALDDIVNPVTNACIIKAGGLILESHVTEIEKSGIRSVRIRSALTCESKKGVCSLCYGRDL 900
Query: 901 ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFIESPCDGIVKIKNRN 960
ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSF+ES C+G VKIKNR+
Sbjct: 901 ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFLESSCEGTVKIKNRS 960
Query: 961 VCRNSTNDLISMGRNTTLQILDMSGQEQYSHRIMYGAKLFVDDGGVIECGQRISEWDPHT 1020
VCRNS NDLISMGRNTTLQILD+SGQEQ SHRIMYGAKLFVDDG +++ GQR+SEWDPHT
Sbjct: 961 VCRNSANDLISMGRNTTLQILDVSGQEQSSHRIMYGAKLFVDDGDIVKYGQRVSEWDPHT 1020
Query: 1021 FPIITEVSGTVGFEDLVDGISVIESIGESTGIAKRKVIDWRFASRSQNLKPAIVVTDENG 1080
FP+ITEVSG V FEDLVDG+SVIES+GESTGIAKRKVIDWRF SR QNLKPAIVV DENG
Sbjct: 1021 FPMITEVSGIVDFEDLVDGLSVIESVGESTGIAKRKVIDWRFTSRGQNLKPAIVVKDENG 1080
Query: 1081 VVLKSARGTDARWFLPVDALLSVSPGQKVSTGDVLARLPISSAKTKDITSGLPRVAELFE 1140
VLK +RGTDARWFLPVDA+LSVSPGQKVS GDVLAR PISSAKTKDITSGLPRVAELFE
Sbjct: 1081 AVLKFSRGTDARWFLPVDAILSVSPGQKVSVGDVLARSPISSAKTKDITSGLPRVAELFE 1140
Query: 1141 ARRPKNHAILAEISGTIRIKRNYKNKSRVVIEPFEDGVEPAEYFIPKNKHFYLQDGDHVE 1200
ARRPKNHAILAE+SG+I+IKRNYKNKSRV+IEPFE+GVEP EYFIPKNKHFYLQDGD VE
Sbjct: 1141 ARRPKNHAILAEVSGSIKIKRNYKNKSRVLIEPFEEGVEPVEYFIPKNKHFYLQDGDKVE 1200
Query: 1201 KGDYILDGNPVPQDILRIKGVEALASYLINEVQEVYRLEGVAINHKHIEVVVRHMLQKVE 1260
KGDYIL+GNP P DILRIKG+EALASYLINEVQEVYRLEGV IN KHIEVV+R MLQKVE
Sbjct: 1201 KGDYILEGNPAPHDILRIKGIEALASYLINEVQEVYRLEGVLINDKHIEVVIRQMLQKVE 1260
Query: 1261 ITDPADTEYILGDNVDRIEVEELNRSLAQQGKKLVSFSPILQGITKASLQTKSFISAASF 1320
ITDPADTEYILGDN+DR+EVEELNRSLAQQGKK VSFSP+LQGITKASLQTKSFISAASF
Sbjct: 1261 ITDPADTEYILGDNIDRVEVEELNRSLAQQGKKQVSFSPVLQGITKASLQTKSFISAASF 1320
Query: 1321 QETTKVLTEAAIAGKVDTLDGFKENVIVGRSIPAGTGAILHEKRRVAMNRDQMILKERSN 1380
QETTKVLTEAAIAGKVD L+G KENVIVGR IPAGTGAILHEKRR+AMNRDQMILK RSN
Sbjct: 1321 QETTKVLTEAAIAGKVDMLEGLKENVIVGRLIPAGTGAILHEKRRIAMNRDQMILKARSN 1380
Query: 1381 FSQNEDLKNTAIQGSIAE 1398
SQ+ D KN IQG IAE
Sbjct: 1381 SSQDSDSKNNQIQGIIAE 1398