PSIBLAST alignment of GI: 254780142 and protein with PDB id: 2auk

>gi|78101445|pdb|2AUK|A Chain A, Structure Of E. Coli Rna Polymerase Beta' GG' INSERT Length = 190
>gi|78101446|pdb|2AUK|B Chain B, Structure Of E. Coli Rna Polymerase Beta' GG' INSERT Length = 190
>gi|78101447|pdb|2AUK|C Chain C, Structure Of E. Coli Rna Polymerase Beta' GG' INSERT Length = 190
>gi|78101448|pdb|2AUK|D Chain D, Structure Of E. Coli Rna Polymerase Beta' GG' INSERT Length = 190
>gi|78101449|pdb|2AUK|E Chain E, Structure Of E. Coli Rna Polymerase Beta' GG' INSERT Length = 190

 Score =  149 bits (377), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 2/190 (1%)

Query: 936  GAVTVMDRSFIESPCDGIVKIKNRNVCRNSTNDLISMGRNTTLQILDMSGQEQYSHRIMY 995
            G+      S I+    G +K+ N     NS+  L+   RNT L+++D  G+ + S+++ Y
Sbjct: 1    GSHMAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPY 60

Query: 996  GAKLFVDDGGVIECGQRISEWDPHTFPIITEVSGTVGFEDLVDGISVIESIGESTGIAKR 1055
            GA L   DG  +  G+ ++ WDPHT P+ITEVSG V F D++DG ++     E TG++  
Sbjct: 61   GAVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSL 120

Query: 1056 KVIDW-RFASRSQNLKPAIVVTDENGV-VLKSARGTDARWFLPVDALLSVSPGQKVSTGD 1113
             V+D     +  ++L+PA+ + D  G  VL       A++FLP  A++ +  G ++S+GD
Sbjct: 121  VVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGD 180

Query: 1114 VLARLPISSA 1123
             LAR+P  S 
Sbjct: 181  TLARIPQESG 190