RPSBLAST alignment for GI: 254780142 and conserved domain: pfam00623

>gnl|CDD|144278 pfam00623, RNA_pol_Rpb1_2, RNA polymerase Rpb1, domain 2. RNA polymerases catalyse the DNA dependent polymerisation of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). This domain, domain 2, contains the active site. The invariant motif -NADFDGD- binds the active site magnesium ion. Length = 165
 Score =  210 bits (538), Expect = 2e-54
 Identities = 73/165 (44%), Positives = 100/165 (60%), Gaps = 22/165 (13%)

Query: 346 GKRVDYSGRSVIVAGPELQLHQCGLPKLMALELFKPFLYAQLEKKG-------------- 391
           GKRVD+SGRSVI   P L+L + G+P  MALEL KP +  +L  K               
Sbjct: 1   GKRVDFSGRSVITPDPNLKLDEVGVPIEMALELTKPEIVTKLNIKKLRKLVSNGPNVPPG 60

Query: 392 --YVSTVKQAKKFVEKER---PEVW---DVLAEVVHQHVVLLNRAPSLHRLSMQAFEPKI 443
             Y+  +K AK+ +E ++    E+W    VL  V+   VVLLNR P+LHR+S+ A  P++
Sbjct: 61  AKYIKRIKGAKRDLEYKKRIAIELWYGDIVLRHVIDGDVVLLNRQPTLHRMSIMAHRPRV 120

Query: 444 ISGKAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQLEARVLMLS 488
           + GK I+L+P VC+ YNADFDGD+M ++   S EA+ EAR LML 
Sbjct: 121 LEGKTIRLNPSVCSPYNADFDGDEMNLHVPQSEEARAEARELMLV 165