RPSBLAST alignment for GI: 254780142 and conserved domain: PRK09603

>gnl|CDD|181983 PRK09603, PRK09603, bifunctional DNA-directed RNA polymerase subunit beta/beta'; Reviewed. Length = 2890
 Score =  308 bits (791), Expect = 5e-84
 Identities = 154/403 (38%), Positives = 241/403 (59%), Gaps = 31/403 (7%)

Query: 980  ILDMSGQEQYSHRIMYGAKLFVDDGGVIECGQRISE-----------WDPHTFPIITEVS 1028
            I D +G+E   H I  G+++ +DD   +     IS+           WDP+  PII +  
Sbjct: 2496 IADDNGREAARHYIARGSEILIDDNSEVSANSVISKPTTNTFKTIATWDPYNTPIIADFK 2555

Query: 1029 GTVGFEDLVDGISVIESIGESTGIAKRKVIDWRFASRSQNLKPAIVVTDENGVVLKSARG 1088
            G V F D++ G++V E   E+TGI    V D+  +      KP++ +          A G
Sbjct: 2556 GKVSFVDIIAGVTVAEKEDENTGITSLVVNDYIPSG----YKPSLFLE--------GANG 2603

Query: 1089 TDARWFLPVDALLSVSPGQKVSTGDVLARLPISSAKTKDITSGLPRVAELFEAR--RPKN 1146
             + R+FL     +++S G  V   +VLA++P ++ K++DIT GLPRV+ELFEAR  +PK+
Sbjct: 2604 EEIRYFLEPKTSIAISDGSSVEQAEVLAKIPKATVKSRDITGGLPRVSELFEARKPKPKD 2663

Query: 1147 HAILAEISGTIRIKRNYKNKSRVVIEPFEDGVEPAEYFIPKNKHFYLQDGDHVEKGDYIL 1206
             AIL+E+ G +   +  +NK  +++   +DG    +YF+ K K   +   + V  G+ + 
Sbjct: 2664 VAILSEVDGIVSFGKPIRNKEHIIVTS-KDG-RSMDYFVDKGKQILVHADEFVHAGEAMT 2721

Query: 1207 DGNPVPQDILRIKGVEALASYLINEVQEVYRLEGVAINHKHIEVVVRHMLQKVEITDPAD 1266
            DG     DILRI G + L  Y+++EVQ+VYR +GV+I  KHIE++V  ML++V I D  D
Sbjct: 2722 DGVVSSHDILRISGEKELYKYIVSEVQQVYRRQGVSIADKHIEIIVSQMLRQVRILDSGD 2781

Query: 1267 TEYILGDNVDRIEVEELN-RSLAQQGKKLVSFSPILQGITKASLQTKSFISAASFQETTK 1325
            +++I GD V +   +E N R +A +G+  ++  P+L GIT+A++ + S ISAASFQETTK
Sbjct: 2782 SKFIEGDLVSKKLFKEENARVIALKGEPAIA-EPVLLGITRAAIGSDSIISAASFQETTK 2840

Query: 1326 VLTEAAIAGKVDTLDGFKENVIVGRSIPAGTGAILHEKRRVAM 1368
            VLTEA+IA K D L+  KENV++GR IP GTG  +++ +++ +
Sbjct: 2841 VLTEASIAMKKDFLEDLKENVVLGRMIPVGTG--MYKNKKIVL 2881