RPSBLAST alignment for GI: 254780142 and conserved domain: COG0086

>gnl|CDD|30435 COG0086, RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription]. Length = 808

 Score = 42.6 bits (100), Expect = 9e-04
 Identities = 27/224 (12%), Positives = 54/224 (24%), Gaps = 29/224 (12%)

Query: 714 KKMNSIFMMSHSGARGSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKGGLCGFEFFQSC 773
           K + S+             ++        ++     E I+          L   E+    
Sbjct: 84  KSIPSLL----DMTCRDCERVLYF--EAYVVLGTDLEKIQ---------LLNETEYVYDS 128

Query: 774 VGGRKGLLDVVMRTASSGYLSRRLVDVAQNCVVNQVDCNTKKGLTITHIVDSGQVVYSLG 833
                G   + +        + R  +             TK    +  +      + S  
Sbjct: 129 FCAHCGAEAIKILLEKPDLETEREEET---------LSPTKVKKLLKRLKVVDAFLLSGN 179

Query: 834 SRVLGRTALDDIINPLTNECIVKAGQLILESHVNEIEKCGIRSVRIRSALTCESS-RGVC 892
                   +  +  P     I   G    ES +N++ +  I        L   ++   V 
Sbjct: 180 RPEWMILTVLPVPPPDLRPSIQLDGGRFAESDLNDLYRRVINRNNRLKRLLELAAPIIVR 239

Query: 893 VLCYGRDLARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGG 936
                   A  +L +       +     G P   L+ R     G
Sbjct: 240 NEKRMLQEAVDALFDNR-RPRAVTG---GRPLKSLSQRLKGKQG 279