RPSBLAST alignment for GI: 254780142 and conserved domain: KOG0262
>gnl|CDD|35483 KOG0262, KOG0262, KOG0262, RNA polymerase I, large subunit [Transcription]. Length = 1640
Score = 128 bits (324), Expect = 7e-30
Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 60/338 (17%)
Query: 235 NPGWMI-IRKLPVLPPDLRPLVALDFGRFAASDLNDLYRRV------IGRNNRLMRLKSL 287
+P M + L V P RP L + +V I + + M+ K
Sbjct: 323 DPSDMFFLDNLLVPPTRFRPPSMLG-DEVHENPQTLNLNKVLESSVLIRKLLKDMKGKLD 381
Query: 288 HAPEIIIRNEKRM----------LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQ 337
++I+ + + LQ SV+ LFD+ + +R + +L+ K+
Sbjct: 382 EELKLILERLRGIFSKLINAWLQLQASVNVLFDSKMASK----WSRDSPPGIKQILEKKE 437
Query: 338 GRFRTNLLGKRVDYSGRSVIVAGPELQLHQCGLPKLMALELFKP-----FLYAQL----- 387
G FR +++GKRV+Y+ RSVI P ++ ++ G+P + A +L P + +L
Sbjct: 438 GLFRKHMMGKRVNYAARSVISPDPNIETNEIGIPPVFAKKLTYPEPVTPWNVNELRKAVI 497
Query: 388 -------------EKKGYVS-----TVKQ----AKKFVEKERPEVWDVLAEVVHQH---- 421
++ G ++ T +Q A + + + + VH+H
Sbjct: 498 NGPDVHPGATYIQDEDGTLTLLSPMTDEQREALANQLLTPSTGNPTEFGTKKVHRHVKNG 557
Query: 422 -VVLLNRAPSLHRLSMQAFEPKIISG-KAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQ 479
VVL+NR P+LH+ S+ A + +++ G K ++LH C YNADFDGD+M V+ S A+
Sbjct: 558 DVVLMNRQPTLHKPSIMAHKARVLPGEKTLRLHYANCKAYNADFDGDEMNVHFPQSEIAR 617
Query: 480 LEARVLMLSTNNLLHPASGAPVTVPSQDMVLGLCYLST 517
EA + + + L P G P+ QD ++ L+
Sbjct: 618 AEAYNIANTDSQYLVPTDGTPLRGLIQDHIVSGVLLTM 655