HHsearch alignment for GI: 254780143 and conserved domain: PRK08565
>PRK08565 DNA-directed RNA polymerase subunit beta; Provisional.
Probab=100.00 E-value=0 Score=2012.33 Aligned_cols=937 Identities=28% Similarity=0.447 Sum_probs=760.6
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCC----------CHHHHHHC
Q ss_conf 88708899999999986246652211122589997663780767985899999789809858----------89999983
Q gi|254780143|r 25 DIPDLIEVQKASYDHFLMMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLEFVSYEFDPPKF----------DVDDCLWR 94 (1386)
Q Consensus 25 ~~P~Li~iQ~~Sf~~Flq~~~~~~~r~~~GL~~v~~~~fPI~d~~~~~~Lef~~y~l~~Pk~----------tp~ECRlR 94 (1386)
T Consensus 10 ~~~gLv~~qidSFn~Fi----------~~gL~~i~~~~~~I~~~~~~~~l~~~~~~i~~P~~~e~~~~~~~l~P~ecR~r 79 (1101)
T PRK08565 10 KEKGLVRQHLDSFNDFL----------DRGLQEIVDEFGEIKTEIPGLKIKFGKIRVGEPEIKEADGSERPITPMEARLR 79 (1101)
T ss_pred CCCCCHHHHHHHHHHHH----------HHHHHHHHHHCCCEECCCCCEEEEEEEEEEECCEEECCCCCCCCCCHHHHHHC
T ss_conf 89985799999999999----------97189999853975726998899998899808814436675576898999856
Q ss_pred CCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCEECCC------------------------CCEEECCEE
Q ss_conf 99753358999999993178766552000122367875100002689------------------------628986821
Q gi|254780143|r 95 DLTYAVPLKITLRLIVFDVDEFTGAKSIKDIKEQSIYMGDLPLMTKD------------------------GTFVIKGIQ 150 (1386)
Q Consensus 95 ~lTYsapL~V~i~l~v~~~~~~~~~k~~~~ike~~V~lG~IPiMt~~------------------------GyFIING~E 150 (1386)
T Consensus 80 ~~TYs~~l~v~v~~~~~~----------~~~~~~~v~iG~iPiMv~S~~C~L~~~~~~el~~~gE~~~d~GGyFIInG~E 149 (1101)
T PRK08565 80 NLTYAAPLYLEMTLVEDG----------IEYETEEVKIGDLPIMVKSKACPLSGLSPDELIEKGEDPKDPGGYFIINGSE 149 (1101)
T ss_pred CCCEEEEEEEEEEEEECC----------EEEEEEEEEEEECCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCEE
T ss_conf 996568899999999999----------3888999998658779688854467999899986088877899679989928
Q ss_pred EEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCE---EEEEECCCCEEEEEECCC-CCHHHHHHHHHCCCCHH
Q ss_conf 46866512278521202346515778567999981188723---689975898299997187-87039989988099847
Q gi|254780143|r 151 RIVVSQLHRSPGIHFDHDKGRASLSGKLLYACRIIPDQGLW---MDIEFDSKDIIHVRIDRR-RKVPVTSFLMALGMDSE 226 (1386)
Q Consensus 151 RVIVsQl~RSPGVyf~~~k~k~~~s~k~~ysa~IIP~RGSw---Le~e~d~kd~iyvrIdr~-rKIPi~ilLrALG~ssd 226 (1386)
T Consensus 150 RVIv~q~~~~~n~~~~~~---~~~~~~~~~~~~i~s~~~~~~~~~~~~~~~~g~i~~~i~~~~~~IPi~illraLG~~sD 226 (1101)
T PRK08565 150 RVIVSQEDLAPNRILVDK---GEAGSSVTHVAKVFSTRAGYRAQLTVERKKDGTIYVSIPAVPGKIPFVILMRALGLETD 226 (1101)
T ss_pred EEEEEEEECCCCCEEEEE---CCCCCCEEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCEEEHHHHHHHHCCCCH
T ss_conf 999999626899689986---57899368999999778876045899992798799998783547639999998379978
Q ss_pred -HHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHCC
Q ss_conf -9999738740577306731023545666421012232112445845440221020799887876360001026677347
Q gi|254780143|r 227 -EILSTFYPKIVYSQRGDFWCFPLSAADLMVGAKVSSSLVDIDTGEQVIESGKKLTSGLLKSLKEKGVKFLGITSDCLCG 305 (1386)
Q Consensus 227 -eIl~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~ 305 (1386)
T Consensus 227 ~eI~~~i~~d~~~------------------------------------------~----~------------------- 241 (1101)
T PRK08565 227 EDIVDAVSLDPEI------------------------------------------Q----Q------------------- 241 (1101)
T ss_pred HHHHHHHCCCHHH------------------------------------------H----H-------------------
T ss_conf 9999873278899------------------------------------------9----9-------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 41000013666776999623459989999998656541024420244455200000110234588999999887605776
Q gi|254780143|r 306 LYVAEDIVNGETGEIYIEAGDVIDEKSLEEIFHSEIRDIPILYVDSVNNNAYIRNTLVTDKNKDRKDALLDIYRVMRPGD 385 (1386)
Q Consensus 306 ~~~~~~~~d~~~gei~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~d~~~~~~eAl~~I~k~lr~~~ 385 (1386)
T Consensus 242 -------------------------~l~~~l~~------------------------~~~~~~t~e~al~yi~~~~~~~~ 272 (1101)
T PRK08565 242 -------------------------ELLPSLED------------------------ASDIAITREDALDYIGKRVAPGQ 272 (1101)
T ss_pred -------------------------HHHHHHHH------------------------CCCCCCCHHHHHHHHHHHHCCCC
T ss_conf -------------------------99999996------------------------33667899999999997606899
Q ss_pred CCHH--HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC
Q ss_conf 3104--56888862024530233345555777654203667767706618998888988876304876434401015332
Q gi|254780143|r 386 VSTF--SVAESMFNFLFFDSDKYDLSTVGRVKMNMRLNLDTPDDVRHIRKEDIIAIIKILVDLRNGKGTIDDIDNLGNRR 463 (1386)
Q Consensus 386 ~~~~--~~~~~~~~~~~~~~~~y~l~~vgr~~~n~~l~~~~~~~~~~Lt~~d~~~~i~~L~~l~~g~~~~DdiDhlgnkR 463 (1386)
T Consensus 273 ~~~~~~~~~~~~l~~~~l-------pHl-----------g~~~~~~~~K~~~L~~mi~kLl~~~~g~~~~DD~D~l~NkR 334 (1101)
T PRK08565 273 PREFRIRRAEQLLDNYLL-------PHL-----------GTSPEDRIKKAYFLGQMARKLLELYLGRRKPDDKDHYANKR 334 (1101)
T ss_pred CCCHHHHHHHHHHHHHCC-------CCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
T ss_conf 972569999999997384-------766-----------98830257889999999999999875998889863103738
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHCCCCC-------CEEECCCCCCHHH
Q ss_conf 333357878988888899998876531134--4334352112220234655542026675-------0354155421023
Q gi|254780143|r 464 VRSVGEMLKNQYRLGLLRMERSIKERISSV--DIDSVMPQDLINAKPVVSAVCEFFCSSQ-------LSQLEEHVNSLSR 534 (1386)
Q Consensus 464 vr~vgeLl~~~fr~~l~rl~r~i~~~~~~~--~~~~~~~~~~in~~~i~~~i~~ff~t~~-------lsq~ld~~n~ls~ 534 (1386)
T Consensus 335 v~~~G~Ll~~lfr~~l~~~~k~ik~~l~~~~~~~~~~~~~~~i~~~~It~~i~~~fsTGnw~~~~sGlSQ~ldr~N~ls~ 414 (1101)
T PRK08565 335 LRLAGDLLAQLFRTAFKQLVKDLKYQLEKTYARGRRIDIRTIVRPDIITERIRHALATGNWVGGRTGVSQLLDRTNYLST 414 (1101)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH
T ss_conf 85688999999999999999999999998863178788899508255678999998536656787517898536767665
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEEECCCCCCCCEEEEEECCCCC---
Q ss_conf 22001122344444322346655432211110444303566765210210001224424687644106986225534---
Q gi|254780143|r 535 ITHTRRLSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIETPYRKVCDGKVT--- 611 (1386)
Q Consensus 535 lth~RR~s~lgpggl~r~~~~~evR~ih~s~~GriCPieTPEG~n~GLv~~la~~a~in~~g~ie~py~~v~~~~~~--- 611 (1386)
T Consensus 415 lSH~RRv~~----~l~r~~~~~~vR~lHpS~yG~iCPieTPEG~n~GLi~~LA~~a~Is-~~~~~~~i~~~l~~~g~~~~ 489 (1101)
T PRK08565 415 LSHLRRVVS----PLSRTQPHFEARDLHGTQWGRICPFETPEGQNCGLVKNLALLAQIT-VGVDEEEVEELLYDLGVVPV 489 (1101)
T ss_pred HHHHHHCCC----CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEEEC-CCCCCHHHHHHHHHCCCEEH
T ss_conf 102433035----3354566664421477645255565489987512222003589970-58880778999986395665
Q ss_pred ---------CCEEECC---------HHH--------------HCCEEEEC---C--C-CEECCC-CCCCCCCEEE-----
Q ss_conf ---------8166429---------677--------------37637961---6--5-341146-8402220000-----
Q gi|254780143|r 612 ---------NDVVYLS---------AME--------------EENRYIAQ---A--N-SSLDED-GSFTEELVFC----- 647 (1386)
Q Consensus 612 ---------~~i~~l~---------~~~--------------e~~~~Ia~---~--~-~~l~~~-~~~~~~~~~~----- 647 (1386)
T Consensus 490 ~~~~~~~~~~~~v~lnG~~iG~~~~~~~~~~~lr~~rr~~~i~~~~si~~~~~~~~~~i~i~sd~gR~~rPll~~~~~~~ 569 (1101)
T PRK08565 490 EEAREEGKRGARVYLNGRLIGYHPDGEELAETIRELRRSGKISDEVNVAYYRTGEINEVYVNCDAGRVRRPLIVVENGKP 569 (1101)
T ss_pred HHHCCCCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCC
T ss_conf 77042323562799747799997468999999998874388574699997437655658996477621140587227864
Q ss_pred --------------------------------CCCCCCCCCCHH----HEEECCCCCCCEEEECCCCCCCHHHCCHHHHH
Q ss_conf --------------------------------002333322578----72202367211023112333201101002211
Q gi|254780143|r 648 --------------------------------RCAGEEILVPRE----KIDFIDASPKQVVSIAASLIPFLENDDSNRVL 691 (1386)
Q Consensus 648 --------------------------------r~~~~~~~~~~~----~v~~~~i~p~~i~sv~aslIPflehdda~R~l 691 (1386)
T Consensus 570 ~~~~~~~~~~~~~~~~~~~l~~~g~ieyid~~e~~~~~Ia~~~~~~~~~~th~Ei~p~~ilsv~asliPf~~hNqspRn~ 649 (1101)
T PRK08565 570 KLTREHVEKLKKGELTFDDLVKMGVVEYLDAEEEENAYIALDPWDVTKEHTHLEIWPPAILGVVASIIPYPEHNQSPRNT 649 (1101)
T ss_pred CCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCEEEEEEECHHHCCCCCCEEEEEHHHEEEEEECCCCCCCCCCCHHHH
T ss_conf 23488888877488204556407846986554240058996567735665248850136135531146435667215665
Q ss_pred HHHHHHHHHHCCCCCCCCEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 22234443210136654111266201110106530102124434335655302521566556444663011146555445
Q gi|254780143|r 692 MGCNMQRQAVPLLKAEAPFVGTGMESVVAKSSGAAIVAKRAGIVEQVDAIRIVIRSVEGDLDPSTSGVDIYRLMKFQRSN 771 (1386)
Q Consensus 692 ~g~nm~rQav~l~~~~~~~v~tg~E~~~~~~s~~~i~a~~~g~v~~vd~~~i~i~~~~~~~~~~~~~~~~y~~~~~~~~~ 771 (1386)
T Consensus 650 yq~~m~KQa~g~~~~n~~-----------------------------------------~r~D~~--------------~ 674 (1101)
T PRK08565 650 YQAAMAKQSLGLYAANFR-----------------------------------------IRVDTR--------------G 674 (1101)
T ss_pred HHHCCCCCCCCCCCCCCE-----------------------------------------EEECCC--------------C
T ss_conf 421244333565410011-----------------------------------------576155--------------5
Q ss_pred CCCCCCCCCCCCCCCEEECCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHCCCCCEEEEEEEEHHH
Q ss_conf 47322445304479772078520355223578602223751555313554444420000134425873103466653112
Q gi|254780143|r 772 QNTCVNQRPLVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFTSIHIEEFEVMA 851 (1386)
Q Consensus 772 ~~~~~~q~p~V~~g~~~~~~~~l~~~~~~~~~el~~G~N~~VA~m~~~GYN~EDaiiin~~~v~rg~~~s~h~~~y~~~~ 851 (1386)
T Consensus 675 ~~l~ypQ~PlV~t~----~~~~------~~~~~~p~G~N~iVAvmsy~GYN~EDAIIink~sv~rg~f~s~~~~~y~~~~ 744 (1101)
T PRK08565 675 HLLHYPQRPLVQTR----GLEL------IGYNDRPAGQNAVVAVLSYTGYNIEDAIIMNKASIERGLARSTFFRTYETEE 744 (1101)
T ss_pred CEEECCCCCEEEEC----HHEE------ECCCCCCCCEEEEEEEECCCCCCHHHHHEECCCHHHCCCEEEEEEEEEEEEE
T ss_conf 37971777626502----0014------3457788976689999767786754510002111123870689999999998
Q ss_pred HHCCCCCC-CCCCCCCCCC----HHHHHHCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 11478840-0246665468----678410241374137733136761110124677776770346654303555544323
Q gi|254780143|r 852 RDTKLGPE-EITRDIPNVS----EEGLKNIDECGIICVGAEVNPGDILVGKITPKGESPMTPEEKLLRAIFGEKAVDVRD 926 (1386)
Q Consensus 852 ~~~~~g~~-~~~~~~~~~~----~~~~~~ld~~Giv~~G~~V~~gDilvgk~tp~~~~~~~pe~~~l~~i~~~~~~~~~d 926 (1386)
T Consensus 745 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~LD~dGii~~G~~v~~gDilvGKvsp~~~~~~~~~~~~~--------~~~~d 816 (1101)
T PRK08565 745 RRYPGGQEDKIEIPEPNVRGYRGEEAYRKLDEDGIVSPEVYVEGGDVLIGKTSPPRFLEELEELSGL--------QERRD 816 (1101)
T ss_pred EECCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCC--------CEEEE
T ss_conf 7146997327856897645666466773168568737998966899899963687756542112564--------12531
Q ss_pred CCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 32022788532200121014565420266788889999999872888999887888988888625853456655555432
Q gi|254780143|r 927 TSLRVPSGVSGTVVDVRIFNRHGIDKNERSISVEREQIELLARDKDDEQVILDRNIYSRLMEILCGQNAVSGPKGFKKST 1006 (1386)
Q Consensus 927 ~~~~~~~g~~g~v~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1386)
T Consensus 817 ~s~~~~~~~~g~Vd~v~~~~~----------------------------------------------------------- 837 (1101)
T PRK08565 817 TSVAVRHGEKGIVDTVIITES----------------------------------------------------------- 837 (1101)
T ss_pred CCEECCCCCCCEEEEEEEEEC-----------------------------------------------------------
T ss_conf 551226898734789999853-----------------------------------------------------------
Q ss_pred CCCHHHHHCCCHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCC
Q ss_conf 11357640148543100141586789999999998999999999998988763125886774727699999987558855
Q gi|254780143|r 1007 VLSSDLISEYPRSQWWQFAVQDEKVQRNVESLKVQYETSKSILEDRFKNKIEKIQWGDDMPPGVLRVVKVFVAMKRPIQS 1086 (1386)
Q Consensus 1007 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ki~~~~~~~~gv~~~vKV~ir~~R~p~i 1086 (1386)
T Consensus 838 -------------------------------------------------------------~~~~~~vkv~ir~~R~p~i 856 (1101)
T PRK08565 838 -------------------------------------------------------------PEGNKLVKVRVRDLRIPEL 856 (1101)
T ss_pred -------------------------------------------------------------CCCCEEEEEEEEEECCCCC
T ss_conf -------------------------------------------------------------8884689999841147765
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 23143366787358886300007879358715698668986750708999999999999871962243334322221024
Q gi|254780143|r 1087 GDKMAGRHGNKGIVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRMNVGQIFETHLGWACVGLGKKIKSLINDYKANGDIS 1166 (1386)
Q Consensus 1087 GDKfasRHGqKGVis~i~p~eDMPf~~dG~~pDIIlNPhgvPSRMtIGqllE~~lGka~~~~G~~~~~~~f~~~~~~~~~ 1166 (1386)
T Consensus 857 GDKfasRHGqKGvis~i~p~eDMPf~~dG~~pDiI~NPhg~PSRMtiGql~E~~~gk~~~~~g~~~d------------- 923 (1101)
T PRK08565 857 GDKFASRHGQKGVIGMLVPQEDMPFTEEGIVPDLILNPHAIPSRMTVGQLLEAIAGKVAALTGRFVD------------- 923 (1101)
T ss_pred CCEECCCCCCCCEEEEECCHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-------------
T ss_conf 5431445567633320235301996889988518878987877670999999987688872597311-------------
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 67778776315432210000135256777665302684002565578899999999998686899869998689884026
Q gi|254780143|r 1167 PLRSFLEKVIGTGSHTEKISDYDDDSVLRVAEQWKSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFD 1246 (1386)
Q Consensus 1167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~aTP~F~g~~~~~i~~~L~~aG~~~~Gke~lydG~TGe~~~ 1246 (1386)
T Consensus 924 ----------------------------------------~tp-F~~~~~~~~~~~l~~~g~~~~G~e~ly~G~tG~~~~ 962 (1101)
T PRK08565 924 ----------------------------------------ATP-FEGEPEEELRKELLKLGFKPSGKEVMYDGRTGEKLK 962 (1101)
T ss_pred ----------------------------------------CCC-CCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
T ss_conf ----------------------------------------489-899889999999997598999998967799998605
Q ss_pred CCEEEEEEEEEECCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH----
Q ss_conf 8504884645410110211000023687311030799862331784320789999999869899998611100110----
Q gi|254780143|r 1247 RPVTVGYIYMLKLNHMVSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVLQEMLTIKSDDV---- 1322 (1386)
Q Consensus 1247 ~~IfvG~~YyqkL~HMV~DKiHARstGP~sllTrQP~eGRsr~GGlRfGEMErwaL~AyGAa~~LqE~Lt~kSDdv---- 1322 (1386)
T Consensus 963 ~~i~~G~~yy~rL~HmV~DK~haRs~Gp~~~lT~QP~~Gr~~~GG~R~GEME~dal~a~Gaa~~L~erl~~~SD~~~~~v 1042 (1101)
T PRK08565 963 ADIFIGVVYYQKLHHMVADKIHARARGPVQILTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLLDSSDKTVIYV 1042 (1101)
T ss_pred CEEEEEHHHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 62899736732251242427664515898772379999766789843546789999998499999999755489732450
Q ss_pred ---HH-------HHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf ---15-------999988763878--78997866778999999985420027640665
Q gi|254780143|r 1323 ---VG-------RTRVYESIVAGN--DTFETGTPESFNVLVKEMQALGLSIDLENSRT 1368 (1386)
Q Consensus 1323 ---~g-------r~~~~~~iv~g~--~~~~~~~pesf~vl~~El~~l~l~~~~~~~~~ 1368 (1386)
T Consensus 1043 c~~cg~~~~~~~~~~~~~c~~c~~~~~~~~~~iPy~fk~L~~EL~sm~i~~~l~~~d~ 1100 (1101)
T PRK08565 1043 CELCGHIAWYDRRKNKPVCPVHGDKGRISPVEVSYAFKLLLQELMSMGIRPRLELGDK 1100 (1101)
T ss_pred CCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 0366751443045673576677987861316798899999999987888649984687