HHsearch alignment for GI: 254780143 and conserved domain: PRK09603
>PRK09603 DNA-directed RNA polymerase subunit beta/beta'; Reviewed.
Probab=100.00 E-value=0 Score=3176.59 Aligned_cols=1347 Identities=44% Similarity=0.757 Sum_probs=1256.7
Q ss_pred CCCEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCC
Q ss_conf 18633210131046667887088999999999862466522111225899976637807679858999997898098588
Q gi|254780143|r 8 NGLGRVRKFFGKNPEIIDIPDLIEVQKASYDHFLMMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLEFVSYEFDPPKFD 87 (1386)
Q Consensus 8 ~~~~~~R~~f~k~~~~~~~P~Li~iQ~~Sf~~Flq~~~~~~~r~~~GL~~v~~~~fPI~d~~~~~~Lef~~y~l~~Pk~t 87 (1386)
T Consensus 6 ~~~~r~R~~f~k~~~~~~~PnLi~iQ~~Sy~~Fl~----~~~~~~~Gl~~vf~~ifPI~~~~~~~~lef~~y~~~~pky~ 81 (2890)
T PRK09603 6 PLKNRLRADFTKTPTDLEVPNLLLLQRDSYDSFLY----SKDGKESGIEKVFKSIFPIQDEHNRITLEYAGCEFGKSKYT 81 (2890)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCC
T ss_conf 77665302514788778998551888999999826----88553525999987518827799988999841486899899
Q ss_pred HHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCC-CCEEEEEEEEEEEECCEECCCCCEEECCEEEEEEEEECCCCCEEEC
Q ss_conf 999998399753358999999993178766552-0001223678751000026896289868214686651227852120
Q gi|254780143|r 88 VDDCLWRDLTYAVPLKITLRLIVFDVDEFTGAK-SIKDIKEQSIYMGDLPLMTKDGTFVIKGIQRIVVSQLHRSPGIHFD 166 (1386)
Q Consensus 88 p~ECRlR~lTYsapL~V~i~l~v~~~~~~~~~k-~~~~ike~~V~lG~IPiMt~~GyFIING~ERVIVsQl~RSPGVyf~ 166 (1386)
T Consensus 82 ~~Ec~~r~~tY~~pl~v~~rl~~~~~d~~tge~~~~k~ikeq~v~~gdiPlMT~~GtFIING~ERViVsQl~RSPGvyf~ 161 (2890)
T PRK09603 82 VREAMERGITYSIPLKIKVRLILWEKDTKSGEKNGIKDIKEQSIFIREIPLMTERTSFIINGVERVVVNQLHRSPGVIFK 161 (2890)
T ss_pred HHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEE
T ss_conf 99998649914540799999998257767665056676614369960765327997699669855787633439922051
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 23465157785679999811887236899758982999971878703998998809984799997387405773067310
Q gi|254780143|r 167 HDKGRASLSGKLLYACRIIPDQGLWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGMDSEEILSTFYPKIVYSQRGDFWC 246 (1386)
Q Consensus 167 ~~k~k~~~s~k~~ysa~IIP~RGSwLe~e~d~kd~iyvrIdr~rKIPi~ilLrALG~ssdeIl~~f~~~~~~~~~~~~~~ 246 (1386)
T Consensus 162 ~~~~~~-~~~k~~y~a~iIP~rGsWle~e~d~kd~i~vrIDr~rK~p~t~lLrAlG~~~~~il~~f~~~~~~~~~~~~~~ 240 (2890)
T PRK09603 162 EEESST-SLNKLIYTGQIIPDRGSWLYFEYDSKDVLYARINKRRKVPVTILFRAMDYQKQDIIKMFYPLVKVRYENDKYL 240 (2890)
T ss_pred CCCCCC-CCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCC
T ss_conf 455888-8885789999916997628989868986999981888612999998829998999998502221110366422
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 23545666421012232112445845440221020799887876360001026677347410000136667769996234
Q gi|254780143|r 247 FPLSAADLMVGAKVSSSLVDIDTGEQVIESGKKLTSGLLKSLKEKGVKFLGITSDCLCGLYVAEDIVNGETGEIYIEAGD 326 (1386)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~d~~~gei~~~~~~ 326 (1386)
T Consensus 241 ~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~--ei~~~~~~ 315 (2890)
T PRK09603 241 IPFASLDA--NQRMEFDLKDPQ-GKLILLAGKKLTSRKIKELKENHLEWVEYPMDILLNRHLAEPVMVGK--EVLLDMLT 315 (2890)
T ss_pred CCCCHHHC--CCCCCHHHHCCC-CCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHCCCCCCCH--HEEEECCC
T ss_conf 33440110--453110000245-55222145302288887888615440115267652201011225701--21320233
Q ss_pred CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCCCC------------CCHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 59989999998656541024420244455200000110234------------588999999887605776310456888
Q gi|254780143|r 327 VIDEKSLEEIFHSEIRDIPILYVDSVNNNAYIRNTLVTDKN------------KDRKDALLDIYRVMRPGDVSTFSVAES 394 (1386)
Q Consensus 327 ~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~d~~------------~~~~eAl~~I~k~lr~~~~~~~~~~~~ 394 (1386)
T Consensus 316 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~a~~~iy~~~rpgep~~~~~a~~ 395 (2890)
T PRK09603 316 QLDKNKLEKIHDLGVQEFVIINDLALGHDASIIHSFSADSESLKLLKQTEKIDDENALAAIRIHKVMKPGDPVTTEVAKQ 395 (2890)
T ss_pred CCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 01588899998647633787403224555101012013530121101344556235678999998627999987899999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHH
Q ss_conf 86202453023334555577765420366776770661899888898887630487643440101533233335787898
Q gi|254780143|r 395 MFNFLFFDSDKYDLSTVGRVKMNMRLNLDTPDDVRHIRKEDIIAIIKILVDLRNGKGTIDDIDNLGNRRVRSVGEMLKNQ 474 (1386)
Q Consensus 395 ~~~~~~~~~~~y~l~~vgr~~~n~~l~~~~~~~~~~Lt~~d~~~~i~~L~~l~~g~~~~DdiDhlgnkRvr~vgeLl~~~ 474 (1386)
T Consensus 396 ~~~~lff~~~rydL~~vGR~k~N~kl~l~~~~~~~~Lt~~Dii~~i~yli~l~~g~g~~DDIDhLgNRRvRsVGELl~nQ 475 (2890)
T PRK09603 396 FVKKLFFDPERYDLTMVGRMKMNHKLGLHVPDYITTLTHEDIITTVKYLMKIKNNQGKIDDRDHLGNRRIRAVGELLANE 475 (2890)
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99874268011333777678777531899886644458999999999987303389987766565666106299999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 888889999887653113443--343521122202346555420266750354155421023220011223444443223
Q gi|254780143|r 475 YRLGLLRMERSIKERISSVDI--DSVMPQDLINAKPVVSAVCEFFCSSQLSQLEEHVNSLSRITHTRRLSALGQGGVARA 552 (1386)
Q Consensus 475 fr~~l~rl~r~i~~~~~~~~~--~~~~~~~~in~~~i~~~i~~ff~t~~lsq~ld~~n~ls~lth~RR~s~lgpggl~r~ 552 (1386)
T Consensus 476 ~riGL~Rmer~irerms~~~~~~~~~~p~~liN~kpi~a~ikeFFgssqLSQFMDQtNPLaElTHKRRlSaLGPGGL~Re 555 (2890)
T PRK09603 476 LHSGLVKMQKTIKDKLTTMSGAFDSLMPHDLVNSKMITSTIMEFFMGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKD 555 (2890)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99999999999998860200454656705410646799999998688963120215583666651341126389888854
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEEECCCCCCCCEEEEEECCCCCCCEEECCHHHHCCEEEECCCC
Q ss_conf 46655432211110444303566765210210001224424687644106986225534816642967737637961653
Q gi|254780143|r 553 RAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIETPYRKVCDGKVTNDVVYLSAMEEENRYIAQANS 632 (1386)
Q Consensus 553 ~~~~evR~ih~s~~GriCPieTPEG~n~GLv~~la~~a~in~~g~ie~py~~v~~~~~~~~i~~l~~~~e~~~~Ia~~~~ 632 (1386)
T Consensus 556 rAgfEVRDVH~THYGRICPIETPEGqNiGLI~SLA~yA~Vn~~GfieTPy~kV~~g~vt~ei~yLsA~eE~~~~iA~a~~ 635 (2890)
T PRK09603 556 RVGFEARDVHPTHYGRICPIETPEGQNIGLINTLSTFTRVNDLGFIEAPYKKVVDGKVVGETIYLTAIQEDSHIIAPAST 635 (2890)
T ss_pred CCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCEEEEECCEECCCEEEECCCCCCCCEEECCCE
T ss_conf 57985312877523465877799865322487777657777898644872998587242533653650025727821554
Q ss_pred EECCCCCCCCCCEEECCCCCCCCCCHHHEEECCCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEC
Q ss_conf 41146840222000000233332257872202367211023112333201101002211222344432101366541112
Q gi|254780143|r 633 SLDEDGSFTEELVFCRCAGEEILVPREKIDFIDASPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVG 712 (1386)
Q Consensus 633 ~l~~~~~~~~~~~~~r~~~~~~~~~~~~v~~~~i~p~~i~sv~aslIPflehdda~R~l~g~nm~rQav~l~~~~~~~v~ 712 (1386)
T Consensus 636 ~~~~~g~~~~~~v~~R~~ge~~~~~~~~vd~~dvsp~Q~vSvaasLIPFLEhDDANRALMGSNMQRQAVPLl~~eaPiVg 715 (2890)
T PRK09603 636 PIDEEGNILGDLIETRVEGEIVLNEKSKVTLMDLSSSMLVGVAASLIPFLEHDDANRALMGTNMQRQAVPLLRSDAPIVG 715 (2890)
T ss_pred EECCCCCEEEEEEEEEECCCEEECCCCCCEEEEECCCEEECCCCEEEEEEEECCCCCCCCCCCCCHHHEEEECCCCCCCC
T ss_conf 87559817233664257683530251000357505314653550467776316887401045555100330047886457
Q ss_pred CCCCHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 66201110106530102124434335655302521566556444663011146555445473224453044797720785
Q gi|254780143|r 713 TGMESVVAKSSGAAIVAKRAGIVEQVDAIRIVIRSVEGDLDPSTSGVDIYRLMKFQRSNQNTCVNQRPLVKVGDEVRRND 792 (1386)
Q Consensus 713 tg~E~~~~~~s~~~i~a~~~g~v~~vd~~~i~i~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~q~p~V~~g~~~~~~~ 792 (1386)
T Consensus 716 TG~E~~va~DSg~~i~a~~~GiVe~vDa~~I~i~~~~~~----~~~id~Y~l~k~~rSNq~TcinqrPiV~~G~~V~~G~ 791 (2890)
T PRK09603 716 TGIEKIIARDSWGAIKANRAGVVEKIDSKNIYILGEGKE----EAYIDAYSLQKNLRTNQNTSFNQVPIVKVGDKVEAGQ 791 (2890)
T ss_pred CCCHHEEEECCCEEEEECCCCEEEEEECCEEEEEECCCC----CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 776210555376289844795899998988799305888----6226898710025567874047777334798786381
Q ss_pred EECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 20355223578602223751555313554444420000134425873103466653112114788400246665468678
Q gi|254780143|r 793 IIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEG 872 (1386)
Q Consensus 793 ~l~~~~~~~~~el~~G~N~~VA~m~~~GYN~EDaiiin~~~v~rg~~~s~h~~~y~~~~~~~~~g~~~~~~~~~~~~~~~ 872 (1386)
T Consensus 792 iiADGpst~~GELALGkNvlvAfmpW~GyNfEDAIliSErlvkeD~~TSiHIee~e~~~R~tklG~EeiTrdiPnv~e~~ 871 (2890)
T PRK09603 792 IIADGPSMDRGELALGKNVRVAFMPWNGYNFEDAIVVSERITKDDIFTSTHIYEKEVDARELKHGVEEFTADIPDVKEEA 871 (2890)
T ss_pred EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCHHH
T ss_conf 86268677577101575218997288997765246653433033567662353230033123554144405688868787
Q ss_pred HHHCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 41024137413773313676111012467777677034665430355554432332022788532200121014565420
Q gi|254780143|r 873 LKNIDECGIICVGAEVNPGDILVGKITPKGESPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVDVRIFNRHGIDK 952 (1386)
Q Consensus 873 ~~~ld~~Giv~~G~~V~~gDilvgk~tp~~~~~~~pe~~~l~~i~~~~~~~~~d~~~~~~~g~~g~v~~~~~~~r~~~~~ 952 (1386)
T Consensus 872 l~~LDe~GIi~iGa~V~~gDILVGKvtPkget~~tpeekLLraifGeka~~v~dtSLrvp~g~eG~VIdv~~f~r~g~~k 951 (2890)
T PRK09603 872 LAHLDESGIVKVGTYVSAGMILVGKTSPKGEIKSTPEERLLRAIFGDKAGHVVNKSLYCPPSLEGTVIDVKVFTKKGYEK 951 (2890)
T ss_pred HHCCCCCCCEEECCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCH
T ss_conf 63555037988621754688899843678878778688987765178366675754546899987699999974246421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCHHHHHCCCHHHHHEEE-EC
Q ss_conf 26678888999999987288899988788898888862585345----66555554321135764014854310014-15
Q gi|254780143|r 953 NERSISVEREQIELLARDKDDEQVILDRNIYSRLMEILCGQNAV----SGPKGFKKSTVLSSDLISEYPRSQWWQFA-VQ 1027 (1386)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1027 (1386)
T Consensus 952 ~~r~~~~~~~e~~~l~~~~~d~~~~~~~~~~~rl~~~~~~~kl~~d~~~~~~~~~~G~~i~~~~~~~i~~~~~~~~~~~~ 1031 (2890)
T PRK09603 952 DARVLSAYEEEKAKLDMEHFDRLTMLNREELLRVSSLLSQAILEEPFSHNGKDYKEGDQIPKEEIASINRFTLASLVKKY 1031 (2890)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCC
T ss_conf 35566667889887410056665310177787764211123235544347754344541032120456734543321001
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 86789999999998999999999998988763125886774727699999987558855231433667873588863000
Q gi|254780143|r 1028 DEKVQRNVESLKVQYETSKSILEDRFKNKIEKIQWGDDMPPGVLRVVKVFVAMKRPIQSGDKMAGRHGNKGIVSRILPCE 1107 (1386)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ki~~~~~~~~gv~~~vKV~ir~~R~p~iGDKfasRHGqKGVis~i~p~e 1107 (1386)
T Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~~~~~~d~l~~Gv~k~VKV~Ia~kRkiQvGDKmAGRHGNKGVIs~Ilp~E 1111 (2890)
T PRK09603 1032 SKEVQNHYEITKNNFLEQKKVLGEEHEEKLSILEKDDILPNGVIKKVKLYIATKRKLKVGDKMAGRHGNKGIVSNIVPVA 1111 (2890)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 25565689987777888888876666553020346776787872799999965169988412466688863677675601
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-----CCC
Q ss_conf 078793587156986689867507089999999999998719622433343222210246777877631543-----221
Q gi|254780143|r 1108 DMPFLKDGTPVDIVLNPLGVPSRMNVGQIFETHLGWACVGLGKKIKSLINDYKANGDISPLRSFLEKVIGTG-----SHT 1182 (1386)
Q Consensus 1108 DMPf~~dG~~pDIIlNPhgvPSRMtIGqllE~~lGka~~~~G~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~-----~~~ 1182 (1386)
T Consensus 1112 DMPfl~DGtpvDIILNPLGVPSRMNVGQIlE~hLG~Aa~~lG~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (2890)
T PRK09603 1112 DMPYTADGEPVDIVLNPLGVPSRMNIGQILEMHLGLVGKEFGKQIASMLEDKTKD-FAKELRAKMLEIANAINEKDPLTI 1190 (2890)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCHH-HHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 4997989966427689898876540999999889999986332444333310002-456666666655301354553201
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCCH
Q ss_conf 00001352567776653026840025655788999999999986868998699986898840268504884645410110
Q gi|254780143|r 1183 EKISDYDDDSVLRVAEQWKSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLNHM 1262 (1386)
Q Consensus 1183 ~~~~~~~~~~~~~~~~~~~~g~~~aTP~F~g~~~~~i~~~L~~aG~~~~Gke~lydG~TGe~~~~~IfvG~~YyqkL~HM 1262 (1386)
T Consensus 1191 ~~v~~~~~~~ll~~~~~~~~G~~~atPvFdg~~~~~i~~~l~~ag~~~~Gk~~LyDGrTGe~fd~~VtVG~~YmlKL~Hm 1270 (2890)
T PRK09603 1191 HALENCSDEELLEYAKDWSKGVKMAIPVFEGISQEKFYKLFELAKIAMDGKMDLYDGRTGEKMRERVNVGYMYMIKLHHL 1270 (2890)
T ss_pred HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEHHHHHCCCHH
T ss_conf 22211366889987665405973137766887889999999972999999889788998880578667856565325122
Q ss_pred HHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 21100002368731103079986233178432078999999986989999861110011015999988763878789978
Q gi|254780143|r 1263 VSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVLQEMLTIKSDDVVGRTRVYESIVAGNDTFETG 1342 (1386)
Q Consensus 1263 V~DKiHARstGP~sllTrQP~eGRsr~GGlRfGEMErwaL~AyGAa~~LqE~Lt~kSDdv~gr~~~~~~iv~g~~~~~~~ 1342 (1386)
T Consensus 1271 VDDKIHARS~GPYSLvTQQPLgGKAq~GGQRFGEMEVWALEAYGAAytLQE~LTvKSDDv~GR~k~yeaIvkG~~~~~pg 1350 (2890)
T PRK09603 1271 VDEKVHARSTGPYSLVTHQPVGGKALFGGQRFGEMEVWALEAYGAAHTLKEMLTIKSDDIRGRENAYRAIAKGEQVGESE 1350 (2890)
T ss_pred HCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 20263244768652421588885136788314689999988989999998885037413415899999875889898987
Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 667789999999854200276406654
Q gi|254780143|r 1343 TPESFNVLVKEMQALGLSIDLENSRTK 1369 (1386)
Q Consensus 1343 ~pesf~vl~~El~~l~l~~~~~~~~~~ 1369 (1386)
T Consensus 1351 iPESF~VL~kElqsL~Ldv~~~~~~~~ 1377 (2890)
T PRK09603 1351 IPETFYVLTKELQSLALDINIFGDDVD 1377 (2890)
T ss_pred CCCCHHHHHHHHHHCCCCEEECCCCCC
T ss_conf 895299999998757125354355410