PSIBLAST alignment of GI: 254780143 and protein with PDB id: 2waq

>gi|237823479|pdb|2WAQ|B Chain B, The Complete Structure Of The Archaeal 13-Subunit Dna- Directed Rna Polymerase Length = 1131
>gi|237823491|pdb|2WB1|B Chain B, The Complete Structure Of The Archaeal 13-Subunit Dna- Directed Rna Polymerase Length = 1131
 Score =  323 bits (829), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 113/587 (19%), Positives = 192/587 (32%), Gaps = 99/587 (16%)

Query: 800  TDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFTSIHIEEFEVMARDTKLGPE 859
             +  D     N  VA  P         + I    +     + I   E     R+T     
Sbjct: 616  IEYLDAEEEENAYVALEPSDLTPEHTHLEIWSPAILGITASIIPYPEHNQSPRNTYQSAM 675

Query: 860  EITRDIPNVSEEGLKNIDECGIICVGAEVNPGDILVGKITPKGESPMTPEEKLLRAIFGE 919
                     +   L+         +        +    +   G +        + A+   
Sbjct: 676  AKQALGLYAANYQLR---TDTRAHLLHYPQRPLVQTRALDIIGYTNRPAGNNAILAVISF 732

Query: 920  KAVDVRDTSLRVPSGVSGTVVDVRIFNRHGIDKNERSISVEREQIELLARDKDDEQVILD 979
               ++ D+ +   S V   +     F         R  S E  +      DK        
Sbjct: 733  TGYNMEDSIIMNRSSVERGMYRSTFF---------RLYSTEEVKYPGGQEDKIVMPEPGV 783

Query: 980  RNIYSR-LMEILCGQNAVSGPKGFKKSTVLSSDLISEYPRSQWWQFAVQDEKVQRNVESL 1038
            R    +    +L     VS     K   VL   +       ++ + + +  K   ++  +
Sbjct: 784  RGYKGKEYYRLLEDNGVVSPEVEVKGGDVLIGKVSPPRFLQEFKELSPEQAKRDTSI--V 841

Query: 1039 KVQYETSKSILEDRFKNKIEKIQWGDDMPPGVLRVVKVFVAMKRPIQSGDKMAGRHGNKG 1098
                E     L    +                 ++VKV V   R    GDK A RHG KG
Sbjct: 842  TRHGEMGIVDLVLITE------------TAEGNKLVKVRVRDLRIPSIGDKFASRHGQKG 889

Query: 1099 IVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRMNVGQIFETHLGWACVGLGKKIKSLIND 1158
            ++  ++P  DMP+   G   D++LNP  +PSRM +GQI E   G                
Sbjct: 890  VIGMLIPQVDMPYTVKGVVPDVILNPHALPSRMTLGQIMEGIAGKYAA------------ 937

Query: 1159 YKANGDISPLRSFLEKVIGTGSHTEKISDYDDDSVLRVAEQWKSGVPVSTPVFDGADEEA 1218
                                                         +  +TP F     E 
Sbjct: 938  -----------------------------------------LSGNIVDATP-FYKTPIEQ 955

Query: 1219 INSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLNHMVSDKVYARSTGSYSLV 1278
            + + +           + YDG TG+     +  G +Y  KL+HMV+DK++AR+ G   ++
Sbjct: 956  LQNEILKYGYLPDATEVTYDGRTGQKIKSRIYFGVVYYQKLHHMVADKIHARARGPVQIL 1015

Query: 1279 TQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVLQEMLTIKSD-------DVVG------- 1324
            T+QP  G++  GG R GEME  C+  +G A +L++ L   SD       D  G       
Sbjct: 1016 TRQPTEGRAREGGLRFGEMERDCLIGFGTAMLLKDRLLDNSDRTTIYVCDQCGYIGWYDK 1075

Query: 1325 -RTRVYESIVAGN--DTFETGTPESFNVLVKEMQALGLSIDLENSRT 1368
             + + Y   + G+  + F      +F +L++E+ ++ +S  L     
Sbjct: 1076 NKNK-YVCPIHGDKSNLFPVTVSYAFKLLIQELMSMIISPRLILEDR 1121