RPSBLAST alignment for GI: 254780143 and conserved domain: CHL00207
>gnl|CDD|177098 CHL00207, rpoB, RNA polymerase beta subunit; Provisional. Length = 1077
Score = 125 bits (317), Expect = 7e-29
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 24/207 (11%)
Query: 26 IPDLIEVQKASYDHFLMMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLEFV--SYEFDP 83
+PD +E+Q+ S+ FL NEGL I ++G L +Y+
Sbjct: 7 LPDFLEIQRTSFCWFL----------NEGLNEELNIFSKIFDYTGNLELLLFGKNYKLKY 56
Query: 84 PKFDVDDCLWRDLTYAVPLKITLRLIVFDVDEFTGAKSIKDIKEQSIYMGDLPLMTKDGT 143
PK+++ D Y++ + + L+ I IK + +G+LP MT+ GT
Sbjct: 57 PKYNLLSAKSYDSNYSIQIYLPLKFI---------NLKTNKIKFINYLIGNLPKMTQRGT 107
Query: 144 FVIKGIQRIVVSQLHRSPGIHFDHDKGRASLSGKLLYACRIIPDQGLWMDIEFDSKDIIH 203
F+I G++R++VSQ+ RSPGI+F + + S +Y+ +IP++G W+ E D I
Sbjct: 108 FIINGLERVIVSQIIRSPGIYFKKEIKKNS---NKIYSATLIPNRGSWIKFELDKNKEIW 164
Query: 204 VRIDRRRKVPVTSFLMALGMDSEEILS 230
+RID+ RK P+ FL ALG+ ++I S
Sbjct: 165 IRIDKNRKKPLIIFLKALGLTDQDIYS 191