RPSBLAST alignment for GI: 254780143 and conserved domain: PRK07225

>gnl|CDD|180893 PRK07225, PRK07225, DNA-directed RNA polymerase subunit B'; Validated. Length = 605

 Score =  169 bits (430), Expect = 5e-42
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 70/309 (22%)

Query: 1072 RVVKVFVAMKRPIQSGDKMAGRHGNKGIVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRM 1131
            R+VKV V   R  + GDK A RHG KG++  I+P EDMPF + G   D+++NP  +PSRM
Sbjct: 346  RLVKVRVRDLRIPELGDKFASRHGQKGVIGLIVPQEDMPFTESGVVPDLIINPHAIPSRM 405

Query: 1132 NVGQIFETHLGWACVGLGKKIKSLINDYKANGDISPLRSFLEKVIGTGSHTEKISDYDDD 1191
             VG + E         +G K+ SL                                    
Sbjct: 406  TVGHVLEM--------IGGKVGSL------------------------------------ 421

Query: 1192 SVLRVAEQWKSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTV 1251
                       G  V    F G DEE +   L     + +G+ ++YDG+TGE  +  + V
Sbjct: 422  ----------EGRRVDGTAFSGEDEEDLREALEKLGFEHTGKEVMYDGITGEKIEAEIFV 471

Query: 1252 GYIYMLKLNHMVSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVL 1311
            G IY  KL+HMV++K++ARS G   ++T+QP  G++  GG R GEME   +  +GAA +L
Sbjct: 472  GVIYYQKLHHMVANKLHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLL 531

Query: 1312 QEMLTIKSDDVV-------GRTRVYESI-------VAGNDT--FETGTPESFNVLVKEMQ 1355
            +E L  +SD V        G   +Y+         + G +T  +      +F +L+ E++
Sbjct: 532  KERLLDESDKVEIYVCAKCGMIAIYDKKRNRKYCPICGEETDIYPVEMSYAFKLLLDELK 591

Query: 1356 ALGLSIDLE 1364
            +LG++  LE
Sbjct: 592  SLGIAPRLE 600