RPSBLAST alignment for GI: 254780143 and conserved domain: PRK08565

>gnl|CDD|181473 PRK08565, PRK08565, DNA-directed RNA polymerase subunit B; Provisional. Length = 1103

 Score = 83.5 bits (207), Expect = 4e-16
 Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 29/188 (15%)

Query: 422 LDTPDDVRHIRKEDIIA-IIKILVDLRNGKGTIDDIDNLGNRRVRSVGEMLKNQYRLGLL 480
           L T  + R I+K   +  +   L++L  G+   DD D+  N+R+R  G++L   +R+   
Sbjct: 293 LGTSPEDR-IKKAYFLGQMASKLLELYLGRREPDDKDHYANKRLRLAGDLLAELFRVAFK 351

Query: 481 RMERSIKERISS-------VDIDSVMPQDLINAKPVVSAVCEFFCSSQ--------LSQL 525
           ++ + +K ++         +D+ +++  D+I  + +  A+     ++         +SQL
Sbjct: 352 QLVKDLKYQLEKSYARGRKLDLRAIVRPDIITER-IRHAL-----ATGNWVGGRTGVSQL 405

Query: 526 EEHVNSLSRITHTRR-LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVS 584
            +  N LS ++H RR +S L     +R +   E RD+H T +GRICP ET EG N GLV 
Sbjct: 406 LDRTNYLSTLSHLRRVVSPL-----SRGQPHFEARDLHGTQWGRICPFETPEGPNCGLVK 460

Query: 585 SLTSFARV 592
           +L   A++
Sbjct: 461 NLALMAQI 468