RPSBLAST alignment for GI: 254780143 and conserved domain: KOG0214

>gnl|CDD|35435 KOG0214, KOG0214, KOG0214, RNA polymerase II, second largest subunit [Transcription]. Length = 1141

 Score = 57.3 bits (138), Expect = 3e-08
 Identities = 48/251 (19%), Positives = 91/251 (36%), Gaps = 55/251 (21%)

Query: 25  DIPDLIEVQKASYDHFL---MMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLEFVSYEF 81
           +   L+  Q  S+D F+   +  I  D    E    A  +      +     L F     
Sbjct: 14  EEKGLVRQQLDSFDEFIQQTLQEIVADSPKIELQDEAQHTQENPARYQ----LFFEQIYL 69

Query: 82  DPPKFDVDD----------CLWRDLTYAVPLKITLRLIVFDVDEFTGAKSIKDIKEQSIY 131
             P     D             R+LTY+ PL +    IV      T    ++D++EQ ++
Sbjct: 70  SKPTHTESDGSTSTMFPNEARLRNLTYSSPLYVDATKIVK-----TSRDEVEDMQEQKVF 124

Query: 132 MGDLPLMTKD------------------------GTFVIKGIQRIVVSQLHRSPGIHFDH 167
           +G +P+M +                         G F+I G ++++++Q   +  I +  
Sbjct: 125 IGKIPIMLRSSYCLLSGLTDKDLTELGECPYDQGGYFIINGSEKVLIAQEKMATNIVYVF 184

Query: 168 DK---GRASLSGKLLYACRIIPDQGLWMDIEFDSKD-----IIHVRIDRRRKVPVTSFLM 219
            K   G  + +G++             + +  D++      II      ++++P+     
Sbjct: 185 KKAHPGTYAYTGEIRSCLERSSRFISTLSVNMDARAGKGQEIIATLPYIKQEIPILILFR 244

Query: 220 ALGMDSE-EIL 229
           ALG  S+ EIL
Sbjct: 245 ALGFVSDREIL 255