HHsearch results for GI: 254780144 and protein with PDBid: 1dd3_A

>1dd3_A 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; 2.00A {Thermotoga maritima} SCOP: a.108.1.1 d.45.1.1 PDB: 1dd4_A* 1giy_I 1yl3_I
Probab=100.00  E-value=1.3e-38  Score=252.25  Aligned_cols=122  Identities=59%  Similarity=0.836  Sum_probs=108.3

Q ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf             1899999996099999999999999993787100012235--54444322222224311577743775543357877677
Q gi|254780144|r    3 NIESIVEKLSSLTLIEAAELSKRLEKEWGVSASAPVSVVA--PVAAEAGSAASEKTEFEVVLKGFDDPKKKIAVIKEVRA   80 (126)
Q Consensus         3 ki~~ive~i~~LTllE~~eLv~~leekfgv~~~~~~~~~~--~~~~~~~~~~~EKt~fdV~L~~~~~~~~Ki~vIK~vR~   80 (126)
                      .+++|+|+|++|||+|+++|++.|+++|||++++++++++  +++++++++.+|||+|||+|++|+  ++||+|||+||+
T Consensus         2 t~~~ive~i~~LtllE~~eLv~~leek~gv~~~~~~~~~~~~~~~~~~~~~~~Ekt~F~V~L~~~~--~~KI~vIK~VR~   79 (128)
T 1dd3_A            2 TIDEIIEAIEKLTVSELAELVKKLEDKFGVTAAAPVAVAAAPVAGAAAGAAQEEKTEFDVVLKSFG--QNKIQVIKVVRE   79 (128)
T ss_dssp             CHHHHHHHHTTSCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEEECT--TCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC--CCCHHHHHHHHH
T ss_conf             889999999719899999999999999799866310023567666665442233654699981377--654012345775


Q ss_pred             HCCCCHHHHHHHHHHCCH---HHHHCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             659988999999863797---7660999899999999999748579939
Q gi|254780144|r   81 ITDLGLKEAKELVESAPK---SLKTGLSKDEANEMKKKLEDAGATVELR  126 (126)
Q Consensus        81 it~LgLkEAK~lVe~~P~---~ike~v~keeAE~ik~~Le~aGa~VeiK  126 (126)
                      +|||||||||+|||++|+   +||+|++|+|||++|++|+++||+|+||
T Consensus        80 it~LgLkEAK~lVE~aP~~~~viKe~vsKeeAE~iK~kLe~aGA~VelK  128 (128)
T 1dd3_A           80 ITGLGLKEAKDLVEKAGSPDAVIKSGVSKEEAEEIKKKLEEAGAEVELK  128 (128)
T ss_dssp             HHCCCHHHHHHHHTTTTSTTCEEEEEECHHHHHHHHHHHHHTTCEEEEC
T ss_pred             HCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf             3699889999999717984067853889999999999999859879739