HHsearch alignment for GI: 254780145 and conserved domain: PTZ00240
>PTZ00240 60S ribosomal protein P0; Provisional.
Probab=99.20 E-value=2.3e-10 Score=89.16 Aligned_cols=82 Identities=12% Similarity=0.275 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC-------CCCC-----
Q ss_conf 4899999999999995089799998279988999999999965695899861579999973137-------4212-----
Q gi|254780145|r 3 RQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDTS-------IRGI----- 70 (172)
Q Consensus 3 r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~~-------~~~l----- 70 (172)
T Consensus 5 a~wK~~~v~kL~~Ll~~Y~~v~IV~~dnV~S~Qlq~iR~~LRg~-a~i~mgKNTlirkal~~~~~~~~~~~~~kl~~~~~ 83 (323)
T PTZ00240 5 TTAKREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRALRGK-AEFVMGKKTLQAKIVEKRAQAKKASAEAKLFNDQC 83 (323)
T ss_pred CHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCC-EEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 07899999999998852997999972788759999999982297-59998467899999998553047615666422001
Q ss_pred --CCCCCCCEEEEEECC
Q ss_conf --001578437876223
Q gi|254780145|r 71 --SDLFVGQSLIVYSDS 85 (172)
Q Consensus 71 --~~~l~G~~a~~f~~d 85 (172)
T Consensus 84 ~~~~ll~Gnvg~IFTn~ 100 (323)
T PTZ00240 84 EEKNLLSGNTGLIFTNN 100 (323)
T ss_pred CCHHHCCCCEEEEEECC
T ss_conf 20100148658999689