HHsearch alignment of GI: 254780145 and MMDB domain: 3a1y_G_1-206

>3a1y_G (G:1-206) Acidic ribosomal protein P0; stalk, ribosomal protein,helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=99.97  E-value=5.3e-33  Score=238.38  Aligned_cols=170  Identities=14%  Similarity=0.107  Sum_probs=160.3

Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC-------CCCCCCCC
Q ss_conf             74899999999999995089799998279988999999999965695899861579999973137-------42120015
Q gi|254780145|r    2 NRQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDTS-------IRGISDLF   74 (172)
Q Consensus         2 ~r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~~-------~~~l~~~l   74 (172)
                      +|++|+++|+++++.|++++.+++++|+|++++++++||++||++|++++|+||||+++|+++++       ++.+.++|
T Consensus         4 ~~~~K~~~v~~l~~~l~~~~~v~vv~~~gl~~~~l~~lR~~lr~~~~~~~v~KNtL~~~Al~~~~~~~~~~~~~~l~~~l   83 (206)
T 3a1y_G            4 VAEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYI   83 (206)
T ss_dssp             SCCCTTTHHHHHHHHHTTCSEEEEEECTTCCHHHHHHHHHHHHHTTEEEEECSSSSCCHHHHHHHTTCSCSSTTSSSCCC
T ss_pred             CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             38999999999999997699899998379877999999999985697899974689999998431100222178999873


Q ss_pred             CCCEEEEEE-CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----HH
Q ss_conf             784378762-234215788788864100012232102411079899999846999899999999999989999-----99
Q gi|254780145|r   75 VGQSLIVYS-DSPVIAPKISVSFSNDNNEFRVLGGVVEKGVLNQDSIKQIASLPDLEGIRAGIISAIQSNATR-----LV  148 (172)
Q Consensus        75 ~G~~a~~f~-~d~~~~aK~~~~f~k~~~~l~i~gg~~eg~~l~~~~i~~lakLPs~~el~a~lv~~l~~p~~~-----l~  148 (172)
                      +||++++|+ +||..++|++.+|.++++.+.+++|.+||.+++.+++..+++|||++++++++++++++|++.     ++
T Consensus        84 ~G~~~lifs~~d~~~~~K~~~~f~k~~~~~~~~~a~~d~~v~~~~~~~~~a~lps~~~~~~~~~~~~~~~i~~~~~~~la  163 (206)
T 3a1y_G           84 DRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVL  163 (206)
T ss_dssp             CTTEEEEEESSCHHHHHHHHHHCCCC------------------------------------------------------
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEECCEEEEECCEEEE
T ss_conf             68748999458979999999862673445555778852898178888899854578987699817708789993045997


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99977687999999999997626
Q gi|254780145|r  149 RLLGTPQTQVVRAISAFVDKNQQ  171 (172)
Q Consensus       149 ~~L~~~~~~l~~~L~~~~~k~ee  171 (172)
                      ...+.+.++++++|+++.+++++
T Consensus       164 ~~~~~~~~~~a~~L~~l~~k~~~  186 (206)
T 3a1y_G          164 KAGEVITPELANILNALGIQPLE  186 (206)
T ss_dssp             -------------------CCCC
T ss_pred             CCCCCCCHHHHHHHHHCCCCCEE
T ss_conf             47986489999999972988468