HHsearch alignment of GI: 254780145 and MMDB domain: 3a1y_G_1-206
>3a1y_G (G:1-206) Acidic ribosomal protein P0; stalk, ribosomal protein,helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=99.97 E-value=5.3e-33 Score=238.38 Aligned_cols=170 Identities=14% Similarity=0.107 Sum_probs=160.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC-------CCCCCCCC
Q ss_conf 74899999999999995089799998279988999999999965695899861579999973137-------42120015
Q gi|254780145|r 2 NRQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDTS-------IRGISDLF 74 (172)
Q Consensus 2 ~r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~~-------~~~l~~~l 74 (172)
+|++|+++|+++++.|++++.+++++|+|++++++++||++||++|++++|+||||+++|+++++ ++.+.++|
T Consensus 4 ~~~~K~~~v~~l~~~l~~~~~v~vv~~~gl~~~~l~~lR~~lr~~~~~~~v~KNtL~~~Al~~~~~~~~~~~~~~l~~~l 83 (206)
T 3a1y_G 4 VAEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYI 83 (206)
T ss_dssp SCCCTTTHHHHHHHHHTTCSEEEEEECTTCCHHHHHHHHHHHHHTTEEEEECSSSSCCHHHHHHHTTCSCSSTTSSSCCC
T ss_pred CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 38999999999999997699899998379877999999999985697899974689999998431100222178999873
Q ss_pred CCCEEEEEE-CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----HH
Q ss_conf 784378762-234215788788864100012232102411079899999846999899999999999989999-----99
Q gi|254780145|r 75 VGQSLIVYS-DSPVIAPKISVSFSNDNNEFRVLGGVVEKGVLNQDSIKQIASLPDLEGIRAGIISAIQSNATR-----LV 148 (172)
Q Consensus 75 ~G~~a~~f~-~d~~~~aK~~~~f~k~~~~l~i~gg~~eg~~l~~~~i~~lakLPs~~el~a~lv~~l~~p~~~-----l~ 148 (172)
+||++++|+ +||..++|++.+|.++++.+.+++|.+||.+++.+++..+++|||++++++++++++++|++. ++
T Consensus 84 ~G~~~lifs~~d~~~~~K~~~~f~k~~~~~~~~~a~~d~~v~~~~~~~~~a~lps~~~~~~~~~~~~~~~i~~~~~~~la 163 (206)
T 3a1y_G 84 DRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVL 163 (206)
T ss_dssp CTTEEEEEESSCHHHHHHHHHHCCCC------------------------------------------------------
T ss_pred CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEECCEEEEECCEEEE
T ss_conf 68748999458979999999862673445555778852898178888899854578987699817708789993045997
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99977687999999999997626
Q gi|254780145|r 149 RLLGTPQTQVVRAISAFVDKNQQ 171 (172)
Q Consensus 149 ~~L~~~~~~l~~~L~~~~~k~ee 171 (172)
...+.+.++++++|+++.+++++
T Consensus 164 ~~~~~~~~~~a~~L~~l~~k~~~ 186 (206)
T 3a1y_G 164 KAGEVITPELANILNALGIQPLE 186 (206)
T ss_dssp -------------------CCCC
T ss_pred CCCCCCCHHHHHHHHHCCCCCEE
T ss_conf 47986489999999972988468