HHsearch alignment of GI: 254780145 and MMDB domain: 3jyw_8_

>3jyw_8 (8:) 60S ribosomal protein LP0; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=99.78  E-value=4.5e-20  Score=152.88  Aligned_cols=111  Identities=21%  Similarity=0.256  Sum_probs=100.7

Q ss_pred             CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC-----CCCCCCCCCC
Q ss_conf             74899999999999995089799998279988999999999965695899861579999973137-----4212001578
Q gi|254780145|r    2 NRQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDTS-----IRGISDLFVG   76 (172)
Q Consensus         2 ~r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~~-----~~~l~~~l~G   76 (172)
                      +|++|+++|+++++.+++++.+++++|+|+++.+++++|+.||+ +++++|+||||+++|+++++     ++.+.++|.|
T Consensus         2 ~r~~K~~~v~~l~~~l~~~~~v~i~~~~gl~~~~l~~lR~~lr~-~~~~~v~KNtl~~~Al~~~~~~~~~~~~l~~~l~G   80 (118)
T 3jyw_8            2 IREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRG-RAVVLMGKNTMVRRAIRGFLSDLPDFEKLLPFVKG   80 (118)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCCCCCBCCSCCTHHHHHHHTTSCS-SCCCSCCCHHHHHHHHHSCCSSSCCSTTCTTTCSS
T ss_pred             CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHC-CCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHCCC
T ss_conf             50889999999999998699899997079867999999985334-86699728899999998522125226778875578


Q ss_pred             CEEEEEE-CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCC
Q ss_conf             4378762-23421578878886410001223210241107
Q gi|254780145|r   77 QSLIVYS-DSPVIAPKISVSFSNDNNEFRVLGGVVEKGVL  115 (172)
Q Consensus        77 ~~a~~f~-~d~~~~aK~~~~f~k~~~~l~i~gg~~eg~~l  115 (172)
                      |++++|+ +||..++|++.+|.+.++  ...|++.+++++
T Consensus        81 ~~ai~ft~~dp~~v~k~~~~f~k~~~--ak~G~ia~~~vy  118 (118)
T 3jyw_8           81 YVGFVFTNEPLTEIKNVIVSNRVAAP--ARAGAVAPEDIW  118 (118)
T ss_dssp             SBCCCCSSSCHHHHHHHHHHHTTTTT--CCCCCBTTBCCC
T ss_pred             CEEEEEECCCHHHHHHHHHHHCCCCC--CCCCCCCCCCCC
T ss_conf             87999979998999999998388666--668870674249