HHsearch alignment for GI: 254780146 and conserved domain: PRK04203
>PRK04203 rpl1P 50S ribosomal protein L1P; Reviewed.
Probab=100.00 E-value=0 Score=431.98 Aligned_cols=200 Identities=31% Similarity=0.516 Sum_probs=187.7
Q ss_pred CHHHHHHH-HHHCCCCCCCCCEEEEEEE-CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHH
Q ss_conf 98999999-9860878998629999995-378764544301379952778865406999750445768741200002789
Q gi|254780146|r 23 GLSDAVVM-LKERATARFDETVEIAMNL-GIDPRHANQMVRGVVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGGED 100 (232)
Q Consensus 23 si~eAi~~-lk~~~~~kf~esvel~i~L-~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~~~~~~~Ak~aGa~~vg~~e 100 (232)
T Consensus 7 ~l~eAv~~~~~~~k~rkF~esvel~i~Lk~iDpkk~dq~vrg~v~LP~g~gK~~rV~Vfa~~e~~~~Ak~aGad~Vg~~d 86 (216)
T PRK04203 7 KIEEAVKEALEESKPRNFTQSVELIVNLKDLDLKKPENRIDEEVVLPHGRGKEVKIAVIADGELALQAKEAGADYVITRE 86 (216)
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHCCCCEEECHH
T ss_conf 99999999998687668874189999616889987665457899899999996389998886669999976999870798
Q ss_pred HHHHHHCC-------CCCCCEEEECHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf 99997517-------5333468864467788886-433200100174223356665579999998601110223575267
Q gi|254780146|r 101 LFEIVKGG-------QIDFDRCIATPDMMPLVGR-LGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGII 172 (232)
Q Consensus 101 li~~i~~~-------~~~fd~~iAt~~~m~~i~k-lgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~i~~r~~k~g~i 172 (232)
T Consensus 87 ~i~ki~~~k~~~kk~~~~fD~~IAtpdmM~~v~k~LGkiLGPrGlMPnPk~gt~--di~~~v~~~k~-~v~~r~dk~~~i 163 (216)
T PRK04203 87 ELEELGGNKRAAKKLANEYDFFIAEADLMPLIGRILGPVLGPRGKMPTPVPPNA--DIKPLIERLKN-TVRIRSRDQPTF 163 (216)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--CHHHHHHHHHC-CEEEEECCCCEE
T ss_conf 999987568888876522588996789999999877664276777898889987--89999999737-569996587667
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEC
Q ss_conf 8753157789899999999999999860866254433779999923897277400
Q gi|254780146|r 173 HAGIGKVSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDL 227 (232)
Q Consensus 173 ~~~IG~~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~id~ 227 (232)
T Consensus 164 h~~IGk~sf~~e~l~eNi~a~~~~i~~~~p~g~--~~Ik~v~lksTMGp~vkv~~ 216 (216)
T PRK04203 164 HVRVGTEDMSPEELAENIEAVLNRIERKLEKGR--QNIKSVYVKTTMGPAVRVEA 216 (216)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHH--CCEEEEEEECCCCCCEECCC
T ss_conf 533417779999999999999999998384421--10536999899898876259