HHsearch alignment for GI: 254780146 and conserved domain: PRK05424
>PRK05424 rplA 50S ribosomal protein L1; Validated.
Probab=100.00 E-value=0 Score=541.23 Aligned_cols=231 Identities=60% Similarity=0.967 Sum_probs=228.3
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
Q ss_conf 74223437989851384768898999999986087899862999999537876454430137995277886540699975
Q gi|254780146|r 2 VSKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFAT 81 (232)
Q Consensus 2 m~k~~Kr~~~~~~~~~~~~~ysi~eAi~~lk~~~~~kf~esvel~i~L~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~ 81 (232)
T Consensus 1 m~K~~Kr~~~~~~~~~~~k~y~l~eAi~~lk~~~~~kF~esve~~i~Lnid~kk~dq~irg~v~LPhg~gk~~kV~Vfa~ 80 (232)
T PRK05424 1 MAKLSKRYRAAAEKVDRTKLYSLEEAIALVKETATAKFDETVEVAVNLGVDPRKADQQVRGAVVLPHGTGKTVRVAVFAK 80 (232)
T ss_pred CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECC
T ss_conf 99536899999861653566799999999997065799988899999767876677614579989988998638999838
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 04457687412000027899999751753334688644677888864332001001742233566655799999986011
Q gi|254780146|r 82 SSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGA 161 (232)
Q Consensus 82 ~~~~~~Ak~aGa~~vg~~eli~~i~~~~~~fd~~iAt~~~m~~i~klgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~ 161 (232)
T Consensus 81 ~~~~~~Ak~aGAd~vG~~dli~~Ik~g~~~fD~~iAtp~~m~~l~klgkiLGPrGLMPnpK~GTVt~di~~~I~~~k~G~ 160 (232)
T PRK05424 81 GEKAEEAKAAGADIVGAEDLIEKIKKGWLDFDVVIATPDMMAVVGKLGKVLGPRGLMPNPKTGTVTPDVAKAVKEAKAGK 160 (232)
T ss_pred CHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 24389999869988751878999866864477777368899999998763074567999998844627999999986893
Q ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEECHHCCC
Q ss_conf 10223575267875315778989999999999999986086625443377999992389727740010059
Q gi|254780146|r 162 VDFRSEKAGIIHAGIGKVSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSSFSV 232 (232)
Q Consensus 162 i~~r~~k~g~i~~~IG~~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~id~~~~~~ 232 (232)
T Consensus 161 v~~r~dk~g~i~~~IGk~sf~~e~l~eNi~a~l~~i~~~kp~~~kg~~ik~i~lssTMGp~i~i~~~~l~~ 231 (232)
T PRK05424 161 VEFRVDKAGIIHAPIGKVSFDAEKLKENLKALLDAIKKAKPATAKGTYIKKVSLSSTMGPGVKVDPASLSA 231 (232)
T ss_pred EEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEECHHHHHC
T ss_conf 79998788859998707869989999999999999998098655776587899989999998975788513