HHsearch alignment of GI: 254780146 and MMDB domain: 1i2a_A_55-148
>1i2a_A (A:55-148) 50S ribosomal protein L1P; primary rRNA-binding protein, translational repressor, ribosome; 1.85A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=1.6e-27 Score=190.74 Aligned_cols=87 Identities=34% Similarity=0.571 Sum_probs=81.1
Q ss_pred CCCCCEEEEECHHHHHHHHHCCCCCCCHHHHHHH------HHCCCCCCCEEEECHHHHHHHHH-HHHHHHHHHCCCCCCC
Q ss_conf 8654069997504457687412000027899999------75175333468864467788886-4332001001742233
Q gi|254780146|r 71 GVNVRVAVFATSSKADEAREAGADIVGGEDLFEI------VKGGQIDFDRCIATPDMMPLVGR-LGRILGPRGIMPNLRV 143 (232)
Q Consensus 71 gk~~kV~Vf~~~~~~~~Ak~aGa~~vg~~eli~~------i~~~~~~fd~~iAt~~~m~~i~k-lgriLGPkglMPn~k~ 143 (232)
|++.||||||+++.+++|+++||++||++||++. ++++|.+||+|||||++||+|++ |||+||||||||||++
T Consensus 1 Gk~~kI~Vf~~~~~~~~A~~aga~~vg~eel~~~i~~~k~ikk~~~~fd~~ia~~~~m~~i~k~lg~iLGprGlmP~~kt 80 (94)
T 1i2a_A 1 GKEAKIAVIGTGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILGPRGKMPKPVP 80 (94)
T ss_dssp SSCCCEEEECCHHHHHHHHHTTCEEECHHHHHHHHHCHHHHHHHHHHCSEEEEEGGGHHHHHHHTHHHHGGGTCCCEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 98508999927766588987388624815688875116677644045667997222788899987178886289887676
Q ss_pred CCCCCCHHHHHHHHHC
Q ss_conf 5666557999999860
Q gi|254780146|r 144 GTVTTDVATAVRESKS 159 (232)
Q Consensus 144 GTv~~di~~~i~~~k~ 159 (232)
+| +|+.++|+++++
T Consensus 81 ~t--~di~~~I~~~ks 94 (94)
T 1i2a_A 81 AN--ANIKPLVERLKK 94 (94)
T ss_dssp TT--CCCHHHHHHHHT
T ss_pred CC--CHHHHHHHHHHC
T ss_conf 64--126788888740