HHsearch alignment of GI: 254780146 and MMDB domain: 2zkr_5_1-54_148-212

>2zkr_5 (5:1-54,5:148-212) 60S ribosomal protein L10A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.96  E-value=5.4e-29  Score=199.90  Aligned_cols=114  Identities=25%  Similarity=0.375  Sum_probs=107.3

Q ss_pred             CCCHHHHHHHHHHCCC-CCCCCCEEEEEEE-CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCH
Q ss_conf             8898999999986087-8998629999995-3787645443013799527788654069997504457687412000027
Q gi|254780146|r   21 LYGLSDAVVMLKERAT-ARFDETVEIAMNL-GIDPRHANQMVRGVVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGG   98 (232)
Q Consensus        21 ~ysi~eAi~~lk~~~~-~kf~esvel~i~L-~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~~~~~~~Ak~aGa~~vg~   98 (232)
                      .|++.||++.+++.++ +||+||||++++| |+|++|++|++||+|.||||+|                           
T Consensus         3 ~~~l~eai~~~~~~~~~~kF~esVe~~i~Lk~iD~~k~dq~vrg~v~LP~g~g---------------------------   55 (119)
T 2zkr_5            3 DQEIENAVSRALEDAPERNFRETVDLAVNLRDLDLNDPSNRVDESVVLPAGTN---------------------------   55 (119)
T ss_dssp             CTTHHHHHHHHHHTSCCCSSCCEEEEEEEESSCCTTTTTTCCCCEEECSSCCT---------------------------
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCH---------------------------
T ss_conf             77899999999985751589724999998458887761412678998345674---------------------------


Q ss_pred             HHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECC
Q ss_conf             89999975175333468864467788886433200100174223356665579999998601110223575267875315
Q gi|254780146|r   99 EDLFEIVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGK  178 (232)
Q Consensus        99 ~eli~~i~~~~~~fd~~iAt~~~m~~i~klgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~i~~r~~k~g~i~~~IG~  178 (232)
                                                                                    +++||+|+.|++|++||+
T Consensus        56 --------------------------------------------------------------~V~fr~dk~g~ihv~VGk   73 (119)
T 2zkr_5           56 --------------------------------------------------------------TVQLRSGERRTFHTRVGA   73 (119)
T ss_dssp             --------------------------------------------------------------EEECCCSSSSEEEEEEEE
T ss_pred             --------------------------------------------------------------HEEEECCCCEEEEECCCC
T ss_conf             --------------------------------------------------------------012220330023101344


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEE
Q ss_conf             77898999999999999998608662544337799999238972774
Q gi|254780146|r  179 VSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKV  225 (232)
Q Consensus       179 ~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~i  225 (232)
                      ++|++|||.||+.+++++|.+.+|.+.+|  |+++|||||||||++|
T Consensus        74 ~sf~~e~i~eNi~a~l~~i~~~~p~~~k~--Iksi~lksTMGp~i~i  118 (119)
T 2zkr_5           74 EDMSAENIADNIDVILRRLHADLEKGPLN--IDTVYVKTTMGPAMEV  118 (119)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHTTTCCCTTT--EEEEEEEESSSCCEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCCCC--EEEEEEECCCCCCEEC
T ss_conf             56799999999999998612001158643--5589998999988768