Probab=100.00 E-value=0 Score=396.34 Aligned_cols=200 Identities=29% Similarity=0.421 Sum_probs=185.7
Q ss_pred CCHHHHHHHHHHCCC-CCCCCCEEEEEEE-CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCHH
Q ss_conf 898999999986087-8998629999995-37876454430137995277886540699975044576874120000278
Q gi|254780146|r 22 YGLSDAVVMLKERAT-ARFDETVEIAMNL-GIDPRHANQMVRGVVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGGE 99 (232)
Q Consensus 22 ysi~eAi~~lk~~~~-~kf~esvel~i~L-~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~~~~~~~Ak~aGa~~vg~~ 99 (232)
.++.||++.+++.++ +||+||||++++| ++|++|++++|||+|.||||+|++.+|||||+++.+++|+++||+++|++
T Consensus 4 ~~~~~ai~~~~~~~k~rkF~esvel~i~Lk~iD~kk~d~~irg~v~LPh~~gk~~kV~Vf~~~e~~~~Ak~aga~~vg~~ 83 (212)
T d1i2aa_ 4 EALLQAVKEARELAKPRNFTQSFEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAVIGTGDLAKQAEELGLTVIRKE 83 (212)
T ss_dssp HHHHHHHHHHHHHSCCCSSCCEEEEEEEESSCCTTSGGGCCEEEEECTTCCSSCCCEEEECCHHHHHHHHHTTCEEECHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCH
T ss_conf 99999999999867755887449999962777887665002567627999887631899840666777652000003707
Q ss_pred HHHH------HHHCCCCCCCEEEECHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEE
Q ss_conf 9999------975175333468864467788886-433200100174223356665579999998601110223575267
Q gi|254780146|r 100 DLFE------IVKGGQIDFDRCIATPDMMPLVGR-LGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGII 172 (232)
Q Consensus 100 eli~------~i~~~~~~fd~~iAt~~~m~~i~k-lgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~i~~r~~k~g~i 172 (232)
||++ +++++|.+||+|||||+|||+|++ |||+||||||||||++|| +|+.++|+++++| +.|+.++.|++
T Consensus 84 el~~~~~~~~~~kk~~~~~D~~iat~~~m~~l~k~lgkiLGpkglmP~p~~~t--~di~~~v~~~k~~-~~~~~~~~~~i 160 (212)
T d1i2aa_ 84 EIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILGPRGKMPKPVPAN--ANIKPLVERLKKT-VVINTRDKPYF 160 (212)
T ss_dssp HHHHHHHCHHHHHHHHHHCSEEEEEGGGHHHHHHHTHHHHGGGTCCCEEECTT--CCCHHHHHHHHTE-EEEECTTSSEE
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHHCC-EEEEECCCCEE
T ss_conf 78888743543421144577687523178787887544656410345577642--1046789997445-66430477347
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEE
Q ss_conf 875315778989999999999999986086625443377999992389727740
Q gi|254780146|r 173 HAGIGKVSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVD 226 (232)
Q Consensus 173 ~~~IG~~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~id 226 (232)
|++||+++|+++||.||+.+++++|.+.+|.+. .||+++|||||||||++|.
T Consensus 161 ~~~IG~~~m~~e~i~eNi~a~~~~i~~~~pkg~--~~Ik~v~lssTmgp~~~i~ 212 (212)
T d1i2aa_ 161 QVLVGNEKMTDEQIVDNIEAVLNVVAKKYEKGL--YHIKDAYVKLTMGPAVKVK 212 (212)
T ss_dssp EEEEEETTSCHHHHHHHHHHHHHHHHHHSTTGG--GGEEEEEEEETTSCCEECC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC--EEEEEEEEECCCCCCEECC
T ss_conf 786411248999999999999999986475786--2488999989999888659
class: Multi-domain proteins (alpha and beta)
fold: Ribosomal protein L1
superfamily: Ribosomal protein L1
family: Ribosomal protein L1
domain: Ribosomal protein L1
species: Archaeon Methanococcus jannaschii [TaxId: 2190]