PSIBLAST alignment of GI: 254780146 and protein with PDB id: 1dwu
gi|12084594|pdb|1DWU|A Chain A, Ribosomal Protein L1 Length = 213
>gi|12084595|pdb|1DWU|B Chain B, Ribosomal Protein L1 Length = 213
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 23 GLSDAVVMLKERATAR-FDETVEIAMNLG-IDPRHANQMVRGVVTMPNGTGVNVRVAVFA 80
+ AV + A R F +++++ +NL +D ++ V +PNG G ++AV A
Sbjct: 5 NILKAVKEARSLAKPRNFTQSLDLIINLKELDLSRPENRLKEQVVLPNGRGKEPKIAVIA 64
Query: 81 TSSKADEAREAGADIVGGEDLFEIVKGGQI------DFDRCIATPDMMPLVGR-LGRILG 133
A +A E G ++ ++L E+ K ++ + D IA DMMPLVG+ LG +LG
Sbjct: 65 KGDLAAQAEEMGLTVIRQDELEELGKNKKMAKKIANEHDFFIAQADMMPLVGKTLGPVLG 124
Query: 134 PRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIEENVLAF 193
PRG MP ++ V K + + + H +G ++++ EN+ A
Sbjct: 125 PRGKMPQPVPAN--ANLTPLVERLKKTVLIN-TRDKPLFHVLVGNEKMSDEELAENIEAI 181
Query: 194 VSAVVKAKPSVAKGDY-VKRVTLSSTMGCGIKVD 226
++ V + KG Y VK TMG +++
Sbjct: 182 LNTVSRK---YEKGLYHVKSAYTKLTMGPPAQIE 212