PSIBLAST alignment of GI: 254780146 and protein with PDB id: 1u63
>gi|66360220|pdb|1U63|A Chain A, The Structure Of A Ribosomal Protein L1-Mrna Complex Length = 219
>gi|66360222|pdb|1U63|C Chain C, The Structure Of A Ribosomal Protein L1-Mrna Complex Length = 219
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 23 GLSDAVVMLKERATAR-FDETVEIAMNLG-IDPRHANQMVRGVVTMPNGTGVNVRVAVFA 80
L AV +E A R F ++ E L ID R ++ V +P+G G ++AV
Sbjct: 5 ALLQAVKEARELAKPRNFTQSFEFIATLKEIDXRKPENRIKTEVVLPHGRGKEAKIAVIG 64
Query: 81 TSSKADEAREAGADIVGGEDLF------EIVKGGQIDFDRCIATPDMMPLVGRL-GRILG 133
T A +A E G ++ E++ ++ D IA D+ PL+GR G ILG
Sbjct: 65 TGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLXPLIGRYXGVILG 124
Query: 134 PRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIEENVLAF 193
PRG P + ++ V K V + +G +++I +N+ A
Sbjct: 125 PRGKXP--KPVPANANIKPLVERLK-KTVVINTRDKPYFQVLVGNEKXTDEQIVDNIEAV 181
Query: 194 VSAVVKAKPSVAKGDY-VKRVTLSSTMGC 221
++ V K KG Y +K + T G
Sbjct: 182 LNVVAKK---YEKGLYHIKDAYVKLTXGP 207