HHsearch alignment for GI: 254780147 and conserved domain: PRK01143

>PRK01143 rpl11p 50S ribosomal protein L11P; Validated.
Probab=100.00  E-value=0  Score=355.99  Aligned_cols=135  Identities=36%  Similarity=0.676  Sum_probs=132.3

Q ss_pred             EEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC-CEEEEEECCCCHHHHHHHHCC
Q ss_conf             8999999445566897044686642999899999999997754379751389998389-529999859748999996337
Q gi|254780147|r    7 RIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKD-KSFTFTMSQPPVSFFLKKEVG   85 (142)
Q Consensus         7 ~~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~~g~~v~V~i~v~~d-ksf~~~i~~P~~s~likk~~g   85 (142)
T Consensus         3 kvikl~v~aG~A~P~PplGpaLG~~Gvni~~f~k~fN~~T~~~~-G~~Vpv~Itv~~d~rsf~~~v~~Pp~s~llkkaag   81 (163)
T PRK01143          3 KTIEVLVEGGKATPGPPLGPALGPLGLNVQQVVKEINEKTKDFK-GMQVPVKIIVDPDTKKFEIEVGVPPTTALLKKELG   81 (163)
T ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHC
T ss_conf             18999822676589998751014679898999999999987536-98442599994589779999748975899999857


Q ss_pred             CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCEEEEC
Q ss_conf             666788999630101259999999999885406787899999977430214528939
Q gi|254780147|r   86 IKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDIEGAMRMVEGSACSMGISVVD  142 (142)
Q Consensus        86 ~~kgs~~p~~~~~g~it~~~i~eIAk~K~~d~~~~~l~~~vk~VlGTa~SmGi~V~~  142 (142)
T Consensus        82 i~kgs~~p~~~~vG~is~~qv~eIAk~K~~dl~~~~l~~a~k~V~GTarSmGi~VeG  138 (163)
T PRK01143         82 IEKGSGEPGHEKVGNLSIEQVIKIAIMKKPDLLAYDLKAAVKEVLGTCVSMGVTVEG  138 (163)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf             665566999807462379999999998573547899999999999876135489857