HHsearch alignment for GI: 254780147 and conserved domain: PRK01143
>PRK01143 rpl11p 50S ribosomal protein L11P; Validated.
Probab=100.00 E-value=0 Score=355.99 Aligned_cols=135 Identities=36% Similarity=0.676 Sum_probs=132.3
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC-CEEEEEECCCCHHHHHHHHCC
Q ss_conf 8999999445566897044686642999899999999997754379751389998389-529999859748999996337
Q gi|254780147|r 7 RIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKD-KSFTFTMSQPPVSFFLKKEVG 85 (142)
Q Consensus 7 ~~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~~g~~v~V~i~v~~d-ksf~~~i~~P~~s~likk~~g 85 (142)
T Consensus 3 kvikl~v~aG~A~P~PplGpaLG~~Gvni~~f~k~fN~~T~~~~-G~~Vpv~Itv~~d~rsf~~~v~~Pp~s~llkkaag 81 (163)
T PRK01143 3 KTIEVLVEGGKATPGPPLGPALGPLGLNVQQVVKEINEKTKDFK-GMQVPVKIIVDPDTKKFEIEVGVPPTTALLKKELG 81 (163)
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHC
T ss_conf 18999822676589998751014679898999999999987536-98442599994589779999748975899999857
Q ss_pred CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCEEEEC
Q ss_conf 666788999630101259999999999885406787899999977430214528939
Q gi|254780147|r 86 IKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDIEGAMRMVEGSACSMGISVVD 142 (142)
Q Consensus 86 ~~kgs~~p~~~~~g~it~~~i~eIAk~K~~d~~~~~l~~~vk~VlGTa~SmGi~V~~ 142 (142)
T Consensus 82 i~kgs~~p~~~~vG~is~~qv~eIAk~K~~dl~~~~l~~a~k~V~GTarSmGi~VeG 138 (163)
T PRK01143 82 IEKGSGEPGHEKVGNLSIEQVIKIAIMKKPDLLAYDLKAAVKEVLGTCVSMGVTVEG 138 (163)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf 665566999807462379999999998573547899999999999876135489857