HHsearch results for GI: 254780147 and protein with PDBid: 1mms_A
>1mms_A Protein (ribosomal protein L11); RNA-protein complex, RNA, ribosome, translocation, thiostrepton; 2.57A {Thermotoga maritima} SCOP: a.4.7.1 d.47.1.1 PDB: 1mvr_L 1oln_A* 1giy_L 1mj1_L* 1ml5_l* 1yl3_L 2b66_K 2b9n_K 2b9p_K 2jq7_A* 2k3f_A 1eg0_K 1jqm_A 1jqs_A 1jqt_A 1r2w_A 1r2x_A 487d_L 1pn8_L 1pn7_L
Probab=100.00 E-value=0 Score=358.91 Aligned_cols=140 Identities=51% Similarity=0.884 Sum_probs=137.8
Q ss_pred CCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCHHHHHH
Q ss_conf 84236899999944556689704468664299989999999999775437975138999838952999985974899999
Q gi|254780147|r 2 AKVVSRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKDKSFTFTMSQPPVSFFLK 81 (142)
Q Consensus 2 ~k~v~~~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~~g~~v~V~i~v~~dksf~~~i~~P~~s~lik 81 (142)
||++++.|+|+++||+|+|+|||||+|||+|||+|+||+|||++|++|+ |++|||+|++|+||+|+|++++||+||||+
T Consensus 1 aK~v~~~ikl~v~aG~A~p~Pplgp~LG~~Gin~~~f~k~fN~~T~~~~-g~~v~V~i~v~~dksf~~~v~~P~~s~li~ 79 (140)
T 1mms_A 1 AKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKA-GMILPVVITVYEDKSFTFIIKTPPASFLLK 79 (140)
T ss_dssp ------CEEEEEETTCCCCTTTTTHHHHTTTCCHHHHHHHHHHHTTTSC-SSEEEEEEEECTTSCEEEEECCCCHHHHHH
T ss_pred CCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCEEEEECCCCHHHHHH
T ss_conf 9716899999976575079998641013579898999999999986216-982138999957972799986997799998
Q ss_pred HHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCEEEEC
Q ss_conf 6337666788999630101259999999999885406787899999977430214528939
Q gi|254780147|r 82 KEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDIEGAMRMVEGSACSMGISVVD 142 (142)
Q Consensus 82 k~~g~~kgs~~p~~~~~g~it~~~i~eIAk~K~~d~~~~~l~~~vk~VlGTa~SmGi~V~~ 142 (142)
+++|+++||++|+++++|+||++|+||||+.|++|+++++|+++||+|+||||||||+|||
T Consensus 80 k~~g~~kgs~~p~~~~vG~it~~~v~eIAk~K~~~~~~~~l~~~vk~VlGTa~SmGi~V~~ 140 (140)
T 1mms_A 80 KAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVVD 140 (140)
T ss_dssp HHHTCSSCCSSTTTSCCEEECHHHHHHHHHHHGGGCCCSSHHHHHHHHHHHHTTTTEEEC-
T ss_pred HHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEHEECEEEEEC
T ss_conf 7026667767999841518709999999999887607788999999534113457489989