HHSEARCH alignment of GI: 254780147 and SCOP domain: d1hc8a_

Alignment

Probab=99.93  E-value=5.6e-27  Score=177.42  Aligned_cols=74  Identities=50%  Similarity=0.798  Sum_probs=72.2

Q ss_pred             EEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCEEEE
Q ss_conf             99985974899999633766678899963010125999999999988540678789999997743021452893
Q gi|254780147|r   68 TFTMSQPPVSFFLKKEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDIEGAMRMVEGSACSMGISVV  141 (142)
Q Consensus        68 ~~~i~~P~~s~likk~~g~~kgs~~p~~~~~g~it~~~i~eIAk~K~~d~~~~~l~~~vk~VlGTa~SmGi~V~  141 (142)
                      +|++++||+||||++++|+++||++|+++++|+||++|+||||+.|++||++.+|+++||+|+||||||||+||
T Consensus         1 TF~~ktPP~s~llkkaagi~kGs~~p~~~~vG~it~~qi~eIAk~K~~Dl~~~~l~~a~k~v~GtArSMGI~Ve   74 (74)
T d1hc8a_           1 TFITKTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVE   74 (74)
T ss_dssp             CCCCCCCCHHHHHHHHHTCSCCCSSTTTCCCEEECHHHHHHHHHHSGGGCCCSSHHHHHHHHHHHHHHHTEEEC
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEC
T ss_conf             93105888999999997888676877884436776999999999987654999999999999966862637839

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Ribosomal protein L11, C-terminal domain
family: Ribosomal protein L11, C-terminal domain
domain: Ribosomal protein L11, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]