HHSEARCH alignment of GI: 254780147 and SCOP domain: d3cjrb1

Alignment

Probab=99.86  E-value=2.1e-24  Score=162.26  Aligned_cols=67  Identities=43%  Similarity=0.800  Sum_probs=66.0

Q ss_pred             CCCHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCEE
Q ss_conf             9748999996337666788999630101259999999999885406787899999977430214528
Q gi|254780147|r   73 QPPVSFFLKKEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDIEGAMRMVEGSACSMGIS  139 (142)
Q Consensus        73 ~P~~s~likk~~g~~kgs~~p~~~~~g~it~~~i~eIAk~K~~d~~~~~l~~~vk~VlGTa~SmGi~  139 (142)
                      |||+||||++++|+++||++|+++++|+||++|+||||+.|++||++.+++++||+|+||||||||+
T Consensus         1 TPP~s~llkkaagi~kGs~~p~~e~vG~it~~~i~eIAk~K~~dl~~~~l~~a~k~v~GTArSmGIe   67 (67)
T d3cjrb1           1 TPPASYLIRKAAGLEKGAHKPGREKVGRITWEQVLEIAKQKMPDLNTTDLEAAARMIAGSARSMGVE   67 (67)
T ss_dssp             CCCHHHHHC-------------------CCCSGGGTHHHHSTTTSCCSCSSTTHHHHHHHHHTTTCC
T ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             9867999999978886779999840341669999999997712426899999999999876631449

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Ribosomal protein L11, C-terminal domain
family: Ribosomal protein L11, C-terminal domain
domain: Ribosomal protein L11, C-terminal domain
species: Thermus thermophilus [TaxId: 274]