PSIBLAST alignment of GI: 254780147 and protein with PDB id: 1pnu
>gi|34811560|pdb|1PNU|G Chain G, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. Length = 143
>gi|34811613|pdb|1PNY|G Chain G, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. Length = 143
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 63/139 (45%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
Query: 3 KVVSRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCY 62
K V+ IVKLQ+ +G A P+PPVGPA+GQ G IM F KAFNA T + IP +T Y
Sbjct: 2 KKVAGIVKLQLPAGKATPAPPVGPALGQYGANIMEFTKAFNAQTAD-KGDAIIPVEITIY 60
Query: 63 KDKSFTFTMSQPPVSFFLKKEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDI 122
D+SFTF PP+S+ ++K GI GS P K G + + + +IA+ KM D+ A +
Sbjct: 61 ADRSFTFITKTPPMSYLIRKAAGIGKGSSTPNKAKVGKLNWDQVLEIAKTKMPDLNAGSV 120
Query: 123 EGAMRMVEGSACSMGISVV 141
E A V G+A SMG++V
Sbjct: 121 EAAANTVAGTARSMGVTVE 139