RPSBLAST alignment of GI: 254780147 and protein with PDBid: 1vq8
>1vq8_I 50S ribosomal protein L11P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: a.4.7.1 PDB: 1vq4_I* 1vq5_I* 1vq6_I* 1vq7_I* 1s72_I* 1vq9_I* 1vqk_I* 1vql_I* 1vqm_I* 1vqn_I* 1vqo_I* 1vqp_I* 1yhq_I* 1yi2_I* 1yij_I* 1yit_I* 1yj9_I* 1yjn_I* 1yjw_I* 2otl_I* ... Length = 162
Score = 146 bits (370), Expect = 2e-36
Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 5 VSRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKD 64
++ +++ + G A P PP+GP +G + + A + N T G +P TV D
Sbjct: 1 MAGTIEVLVPGGEANPGPPLGPELGPTPVDVQAVVQEINDQTAAF-DGTEVPVTVKYDDD 59
Query: 65 KSFTFTMSQPPVSFFLKKEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDIEG 124
SF + PP + +K E G ++GS P ++ ++ + +++IA+ K D+ + D+
Sbjct: 60 GSFEIEVGVPPTAELIKDEAGFETGSGEPQEDFVADLSVDQVKQIAEQKHPDLLSYDLTN 119
Query: 125 AMRMVEGSACSMGISVV 141
A + V G+ S+G+++
Sbjct: 120 AAKEVVGTCTSLGVTIE 136