HHsearch alignment of GI: 254780148 and MMDB domain: 1nz9_A_
>1nz9_A (A:) Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus}
Probab=99.56 E-value=1.1e-14 Score=107.61 Aligned_cols=56 Identities=50% Similarity=0.841 Sum_probs=53.7
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEE
Q ss_conf 12347897799951877897199999828898899999816870478856787123
Q gi|254780148|r 120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEK 175 (177)
Q Consensus 120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~iek 175 (177)
...|++||.|+|++|||+|++|.|.++|.+++|++|++++|||.|+|+++++||||
T Consensus 2 ~~~~~~Gd~V~I~~GpF~g~~G~V~~id~~k~~v~V~i~~fGr~t~vel~~~~ieK 57 (58)
T 1nz9_A 2 QVAFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRETPVELDFSQVVK 57 (58)
T ss_dssp CCSCCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEEEESSSSEEEEEECGGGEEE
T ss_pred CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEECHHHEEC
T ss_conf 12315999999924689998899999908899999999824998337359899770