HHsearch alignment of GI: 254780148 and MMDB domain: 1vq8_T_20-120
>1vq8_T (T:20-120) 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}
Probab=96.59 E-value=0.0041 Score=38.28 Aligned_cols=55 Identities=36% Similarity=0.419 Sum_probs=40.9
Q ss_pred CCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE----EEECCCEEEEEECHHHH
Q ss_conf 01234789779995187789719999982889889999----98168704788567871
Q gi|254780148|r 119 SSVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVE----VVIFGRVTPVELAYNQV 173 (177)
Q Consensus 119 ~~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~----v~i~Gr~~~v~l~~~~i 173 (177)
....+..||.|.|+.|.++|-+|.|.+++.+++++.|. ..--++..++-+..+.|
T Consensus 20 ~~~~I~~GD~V~Vi~G~dkGk~GkV~~V~~~~~~V~Vegin~~k~~~k~~e~pIh~SnV 78 (101)
T 1vq8_T 20 RNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNV 78 (101)
T ss_dssp SEEECCTTCEEEECSSTTTTCEEEEEEEETTTTEEEETTCEEECSSSCEEECCBCGGGE
T ss_pred CCCCEECCCEEEEEECCCCCCCCEEEEEECCCCEEEECCEEEEECCCCEEECCCCHHHE
T ss_conf 33403169999991547899751399998778999996618995479825154464897