HHsearch alignment of GI: 254780148 and MMDB domain: 2e70_A_

>2e70_A (A:) Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.62  E-value=0.0049  Score=37.82  Aligned_cols=46  Identities=24%  Similarity=0.478  Sum_probs=34.9

Q ss_pred             CCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHH
Q ss_conf             78977999518778971999998288988999998168704788567871
Q gi|254780148|r  124 EVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQV  173 (177)
Q Consensus       124 ~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~i  173 (177)
                      -+|..|+|..|||+|+.|.|.+++..  .+.|+++.-.+.+  .++-++|
T Consensus        19 liGktV~I~~G~yKG~~G~Vkd~t~~--~~rVeLhs~~K~v--~V~r~~l   64 (71)
T 2e70_A           19 LIGQTVRISQGPYKGYIGVVKDATES--TARVELHSTCQTI--SVDRQRL   64 (71)
T ss_dssp             STTSEEEECSSTTTTCEEEEEEECSS--CEEEEESSSCCEE--EECTTTE
T ss_pred             CCCCEEEEEECCCCCEEEEEEECCCC--EEEEEECCCCEEE--EEEHHHE
T ss_conf             45888999652768878899965288--6999983688499--9897883